Citrus Sinensis ID: 021391

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310---
Protein Sequence
MWLFSRKGPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMELAKKLWDFSMNLVK
Secondary Structure (PSIPRED)
cccccccccccccccccHHHHHccccccccEEEEcccccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHHccccccEEEEccccccccccccccccHHHHHHHccHHHHHHHHHHHHHHHHHccccccccEEEEccHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccEEEEEEccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccHHHHHccccccccEEEEEcccccccHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHHccccEEEEEEEcHccHHHHHHHHHHHHHccccccEEEEccccccccccccccccEEHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcHHHHccccccccHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEccccccEEcccHccHHHHHHHHHHHHHHHHccccccccEEEEEEEccccccccccEccccccccccHHcccHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mwlfsrkgpsgfsasstaeevtqgidgtgLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIpsakvdamELDVSSLASVRKFASeynsqgrplnilinnagimaspfmlskdnIELQFATNHLGHFLLTHLLLDTMKKTAqkssregrivnvsseahrfaysegirfdkindesaynsfgaygQSKLANILHAKELAKHLKedgvnitanslhpgsivtnLFRYNGILRGFCNTVGKLVlknipqgaatTCYValhpqvqgvsgeyfsdsniykpnsqgqNMELAKKLWDFSMNLVK
Flexible Loop (DISEMBL)
mwlfsrkgpsgfsasSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRnmaagkdvREAIVKEipsakvdameLDVSSLASVRKFASeynsqgrplNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAqkssregrivnvsseahrfaysegirfdkiNDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNitanslhpgsiVTNLFRYNGILRGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMELAKKLWDFSMNLVK
Low Complexity Region (SEG)
MWLFSRKGPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNhlghfllthlllDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMELAKKLWDFSMNLVK
Disordered region (IsUnstruct)
***********************GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTM*************VNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY**************LWD*******
Disordered Region (DISOPRED)
MWLFS**GPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMELAKKLWDFSMNLVK
Disordered Region (DISEMBL)
*********************TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKK**********IVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMELAKKLWDFSMNLVK
Disordered Region (DISPRO)
**********************QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMELAKKLWDFSMNLVK
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MWLFSRKGPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMELAKKLWDFSMNLVK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	313	2.2.26 [Sep-21-2011]
Q6RVV4	316	Short-chain dehydrogenase	N/A	no	1.0	0.990	0.783	1e-146
A2RVM0	322	Short-chain dehydrogenase	no	no	0.993	0.965	0.737	1e-133
Q5F389	414	WW domain-containing oxid	yes	no	0.942	0.712	0.397	6e-55
Q91WL8	414	WW domain-containing oxid	yes	no	0.916	0.693	0.384	7e-55
Q9NZC7	414	WW domain-containing oxid	yes	no	0.942	0.712	0.387	1e-54
Q5R9W5	414	WW domain-containing oxid	yes	no	0.942	0.712	0.381	6e-54
Q803A8	412	WW domain-containing oxid	no	no	0.952	0.723	0.364	3e-46
Q9HBH5	336	Retinol dehydrogenase 14	no	no	0.875	0.815	0.393	3e-46
Q9QYF1	316	Retinol dehydrogenase 11	no	no	0.894	0.886	0.402	1e-45
Q8TC12	318	Retinol dehydrogenase 11	no	no	0.897	0.883	0.390	7e-45

>sp|Q6RVV4|TIC32_PEA Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum GN=TIC32 PE=1 SV=1

 Score =  518 bits (1335), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 246/314 (78%), Positives = 280/314 (89%), Gaps = 1/314 (0%)

Query: 1   MWLFS-RKGPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMA 59
           MW FS +KG SGFS SSTAE+VT GID TGLTAIVTGASSGIG ET RVLALRG HVIM 
Sbjct: 1   MWPFSSKKGVSGFSGSSTAEQVTHGIDATGLTAIVTGASSGIGAETTRVLALRGAHVIMG 60

Query: 60  VRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIM 119
           VRNM A KDV++ I+K+IPSAKVDA+ELD+SSL SV+KFASE+NS GRPLNILINNAGIM
Sbjct: 61  VRNMVAAKDVKDTILKDIPSAKVDAIELDLSSLDSVKKFASEFNSSGRPLNILINNAGIM 120

Query: 120 ASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSE 179
           A PF LSKDNIELQFATNH+GHFLLT+LLLDTMKKT ++S +EGRIVNV+SEAHRFAY E
Sbjct: 121 ACPFKLSKDNIELQFATNHIGHFLLTNLLLDTMKKTTRESKKEGRIVNVASEAHRFAYPE 180

Query: 180 GIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
           GIRFDKIND+S+YN++ AYGQSKLAN+LHA +L KHLKEDGVNITANSLHPG+IVTNLFR
Sbjct: 181 GIRFDKINDQSSYNNWRAYGQSKLANVLHANQLTKHLKEDGVNITANSLHPGTIVTNLFR 240

Query: 240 YNGILRGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNME 299
           +N  + G  N +GKLVLKN+ QGAATTCYVALHPQV+GVSGEYFSDSN+YK    G++++
Sbjct: 241 HNSAVNGLINVIGKLVLKNVQQGAATTCYVALHPQVKGVSGEYFSDSNVYKTTPHGKDVD 300

Query: 300 LAKKLWDFSMNLVK 313
           LAKKLWDFS+NLVK
Sbjct: 301 LAKKLWDFSINLVK 314

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62. Has a NADPH-dependent dehydrogenase activity, but only after preincubation with lipids.
Pisum sativum (taxid: 3888)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|A2RVM0|TIC32_ARATH Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana GN=TIC32 PE=2 SV=1

 Score =  476 bits (1225), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 230/312 (73%), Positives = 261/312 (83%), Gaps = 1/312 (0%)

Query: 1   MWLFSRKGPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAV 60
           MW F  KG SGFS+ STAEEVT G+DGTGLTAIVTGASSGIG ETARVL+LRGVHV+MAV
Sbjct: 1   MWFFGSKGASGFSSRSTAEEVTHGVDGTGLTAIVTGASSGIGVETARVLSLRGVHVVMAV 60

Query: 61  RNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMA 120
           RN  +G  V+E IVK++P AK+D MELD+SS+ SVRKFASEY S G PLN+LINNAGIMA
Sbjct: 61  RNTDSGAKVKEDIVKQVPGAKLDVMELDLSSMQSVRKFASEYKSTGLPLNLLINNAGIMA 120

Query: 121 SPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG 180
            PFMLSKDNIELQFATNHLGHFLLT LLLDTMK T+++S REGRIVN+SSEAHRF+Y EG
Sbjct: 121 CPFMLSKDNIELQFATNHLGHFLLTKLLLDTMKSTSRESKREGRIVNLSSEAHRFSYPEG 180

Query: 181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY 240
           +RFDKIND+S+Y+S  AYGQSKL N+LHA EL K LKEDGVNITANSLHPG+I+TNL RY
Sbjct: 181 VRFDKINDKSSYSSMRAYGQSKLCNVLHANELTKQLKEDGVNITANSLHPGAIMTNLGRY 240

Query: 241 -NGILRGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNME 299
            N  L      V K +LK++PQGAATTCYVAL+PQV GVSGEYF DSNI KP    ++ E
Sbjct: 241 FNPYLAVAVGAVAKYILKSVPQGAATTCYVALNPQVAGVSGEYFQDSNIAKPLPLVKDTE 300

Query: 300 LAKKLWDFSMNL 311
           LAKK+WDFS  L
Sbjct: 301 LAKKVWDFSTKL 312

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q5F389|WWOX_CHICK WW domain-containing oxidoreductase OS=Gallus gallus GN=WWOX PE=2 SV=2

 Score =  214 bits (545), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 122/307 (39%), Positives = 184/307 (59%), Gaps = 12/307 (3%)

Query: 12  FSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVRE 71
           +  +STA E+ QG D +G   I+TGA+SGIG ETA+  AL G +VI+A RNM+ G D  +
Sbjct: 107 YDGNSTAMEILQGRDLSGKVIIITGANSGIGFETAKSFALHGAYVILACRNMSRGNDAVQ 166

Query: 72  AIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIE 131
            I++E   AKV+AM LD++SL SV+ FA  + S+  PL+IL+ NA I  S + L++D +E
Sbjct: 167 RILEEWHKAKVEAMTLDLASLRSVQNFAEAFKSKNMPLHILVCNAAIFGSSWCLTEDGLE 226

Query: 132 LQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAY----SEGIRFDKIN 187
             F  NHLGHF L  LL D +++     S   R+V VSSE+HRF      S  + F  ++
Sbjct: 227 STFQVNHLGHFYLVQLLEDILRR-----SSPARVVVVSSESHRFTEIKDSSGKLDFSLLS 281

Query: 188 -DESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRG 246
             +  Y +  AY +SKL NIL + EL + L   GV  T+NS+HPG+++ +    N  +  
Sbjct: 282 PSKKEYWAMLAYNRSKLCNILFSNELNRRLSPHGV--TSNSVHPGNMIYSSIHRNWWVYT 339

Query: 247 FCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMELAKKLWD 306
              T+ +   K++ QGAATT Y A   +++G+ G YF++     P+++ +N   A  LW+
Sbjct: 340 LLFTLARPFTKSMQQGAATTVYCATAAELEGLGGMYFNNCCRCLPSAEARNELTAVALWE 399

Query: 307 FSMNLVK 313
            S  L++
Sbjct: 400 LSERLIR 406

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. May also play a role in tumor necrosis factor (TNF)-mediated cell death. Required for normal bone development. Inhibits Wnt signaling.

Gallus gallus (taxid: 9031)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q91WL8|WWOX_MOUSE WW domain-containing oxidoreductase OS=Mus musculus GN=Wwox PE=1 SV=1

 Score =  214 bits (545), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 121/315 (38%), Positives = 181/315 (57%), Gaps = 28/315 (8%)

Query: 12  FSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVRE 71
           +  S+TA E+ QG D TG   +VTGA+SGIG ETA+  AL G HVI+A RN++   +   
Sbjct: 107 YDGSTTAMEILQGRDFTGKVVLVTGANSGIGFETAKSFALHGAHVILACRNLSRASEAVS 166

Query: 72  AIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIE 131
            I++E   AKV+AM LD++ L SV+ FA  + ++   L++L+ NAG  A P+ L+KD +E
Sbjct: 167 RILEEWHKAKVEAMTLDLAVLRSVQHFAEAFKAKNVSLHVLVCNAGTFALPWGLTKDGLE 226

Query: 132 LQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESA 191
             F  NHLGHF L  LL D + +     S   R++ VSSE+HRF          IND S 
Sbjct: 227 TTFQVNHLGHFYLVQLLQDVLCR-----SSPARVIVVSSESHRFT--------DINDSSG 273

Query: 192 -------------YNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLF 238
                        Y +  AY +SKL NIL + EL + L   GV  T+N++HPG+++ +  
Sbjct: 274 KLDLSRLSPPRSDYWAMLAYNRSKLCNILFSNELHRRLSPRGV--TSNAVHPGNMMYSAI 331

Query: 239 RYNGILRGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNM 298
             N  +     T+ +   K++ QGAATT Y A+ P+++G+ G YF++     P+ + Q+ 
Sbjct: 332 HRNSWVYKLLFTLARPFTKSMQQGAATTVYCAVAPELEGLGGMYFNNCCRCLPSEEAQSE 391

Query: 299 ELAKKLWDFSMNLVK 313
           E A+ LW+ S  L++
Sbjct: 392 ETARALWELSERLIQ 406

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. Inhibits Wnt signaling, probably by sequestering DVL2 in the cytoplasm (By similarity). May also play a role in tumor necrosis factor (TNF)-mediated cell death. Required for normal bone development.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9NZC7|WWOX_HUMAN WW domain-containing oxidoreductase OS=Homo sapiens GN=WWOX PE=1 SV=1

 Score =  213 bits (543), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 119/307 (38%), Positives = 183/307 (59%), Gaps = 12/307 (3%)

Query: 12  FSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVRE 71
           +  S+TA E+ QG D TG   +VTGA+SGIG ETA+  AL G HVI+A RNMA   +   
Sbjct: 107 YDGSTTAMEILQGRDFTGKVVVVTGANSGIGFETAKSFALHGAHVILACRNMARASEAVS 166

Query: 72  AIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIE 131
            I++E   AKV+AM LD++ L SV+ FA  + ++  PL++L+ NA   A P+ L+KD +E
Sbjct: 167 RILEEWHKAKVEAMTLDLALLRSVQHFAEAFKAKNVPLHVLVCNAATFALPWSLTKDGLE 226

Query: 132 LQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG----IRFDKIN 187
             F  NHLGHF L  LL D + ++A       R++ VSSE+HRF         + F +++
Sbjct: 227 TTFQVNHLGHFYLVQLLQDVLCRSA-----PARVIVVSSESHRFTDINDSLGKLDFSRLS 281

Query: 188 D-ESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRG 246
             ++ Y +  AY +SKL NIL + EL + L   GV  T+N++HPG+++ +    +  +  
Sbjct: 282 PTKNDYWAMLAYNRSKLCNILFSNELHRRLSPRGV--TSNAVHPGNMMYSNIHRSWWVYT 339

Query: 247 FCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMELAKKLWD 306
              T+ +   K++ QGAATT Y A  P+++G+ G YF++     P+ + Q+ E A+ LW 
Sbjct: 340 LLFTLARPFTKSMQQGAATTVYCAAVPELEGLGGMYFNNCCRCMPSPEAQSEETARTLWA 399

Query: 307 FSMNLVK 313
            S  L++
Sbjct: 400 LSERLIQ 406

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. Required for normal bone development (By similarity). May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. May also play a role in tumor necrosis factor (TNF)-mediated cell death. Inhibits Wnt signaling, probably by sequestering DVL2 in the cytoplasm.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q5R9W5|WWOX_PONAB WW domain-containing oxidoreductase OS=Pongo abelii GN=WWOX PE=2 SV=1

 Score =  211 bits (537), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 117/307 (38%), Positives = 183/307 (59%), Gaps = 12/307 (3%)

Query: 12  FSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVRE 71
           +  S+TA E+ QG D TG   +VTGA+SGIG ETA+  AL G HVI+A RNMA   +   
Sbjct: 107 YDGSTTALEILQGRDFTGKVVVVTGANSGIGFETAKSFALHGAHVILACRNMARASEAVS 166

Query: 72  AIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIE 131
            I++E   AKV+A+ LD++ L SV+ FA  + ++  PL++L+ NA   A P+ L+KD +E
Sbjct: 167 RILEEWHKAKVEAVTLDLALLRSVQHFAEAFKAKNVPLHVLVCNAATFALPWSLTKDGLE 226

Query: 132 LQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG----IRFDKIN 187
             F  NHLGHF L  LL D + ++A       R++ VSSE+HRF         + F +++
Sbjct: 227 TTFQVNHLGHFYLVQLLQDVLCRSA-----PARVIVVSSESHRFTDINDSLGKLDFSRLS 281

Query: 188 D-ESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRG 246
             ++ Y +  AY +SKL N+L + EL + L   GV  T+N++HPG+++ +    +  +  
Sbjct: 282 PTKNDYWAMLAYNRSKLCNVLFSNELHRRLSPRGV--TSNAVHPGNMMYSNIHRSWWVYT 339

Query: 247 FCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMELAKKLWD 306
              T+ +   K++ QGAATT Y A  P+++G+ G YF++     P+ + Q+ E A+ LW 
Sbjct: 340 LLFTLARPFTKSMQQGAATTVYCAAAPELEGLGGMYFNNCCRCMPSPEAQSEETARTLWA 399

Query: 307 FSMNLVK 313
            S  L++
Sbjct: 400 LSERLIQ 406

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. May also play a role in tumor necrosis factor (TNF)-mediated cell death. Required for normal bone development. Inhibits Wnt signaling, probably by sequestering DVL2 in the cytoplasm.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q803A8|WWOX_DANRE WW domain-containing oxidoreductase OS=Danio rerio GN=wwox PE=2 SV=1

 Score =  186 bits (471), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/310 (36%), Positives = 173/310 (55%), Gaps = 12/310 (3%)

Query: 9   PSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKD 68
           P  +  ++ A E+  G D +    IVTGA+SGIG ETAR  AL G HVI+A RN +    
Sbjct: 101 PKRYDGNTGALEILHGQDLSDKVIIVTGANSGIGFETARSFALHGAHVILACRNQSRASK 160

Query: 69  VREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKD 128
               I+ E   A+V+ + LD++SL SVR+FA  + +   PL++L+ NA + + P+ L++D
Sbjct: 161 AASLIMGEWSKARVEVLPLDLASLRSVRQFAELFKATKLPLHVLVCNAAVCSQPWRLTED 220

Query: 129 NIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFA----YSEGIRFD 184
             E  F   HLGHFLL  LL D ++ +A       R+V VSSE+HRF         +  D
Sbjct: 221 GFESTFQICHLGHFLLVQLLQDVLRLSA-----PARVVVVSSESHRFTDLLDSCGNLDLD 275

Query: 185 KIN-DESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI 243
            ++  +  Y S  AY ++KL N+L + EL + +   G  I  N+LHPGS++      +  
Sbjct: 276 LLSPPQKNYWSLLAYNRAKLCNLLFSSELHRRMSPHG--ICCNALHPGSMMFTSIHRSWW 333

Query: 244 LRGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMELAKK 303
           L     ++ +   K++ QGAATT Y A+ P+++G+ G YF++     P+ Q Q+   A  
Sbjct: 334 LLTLLFSLARPFTKSMQQGAATTVYCAVAPELEGIGGMYFNNCFRCLPSPQAQDPAAALS 393

Query: 304 LWDFSMNLVK 313
           LW+ S  LV+
Sbjct: 394 LWELSERLVQ 403

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. May also play a role in tumor necrosis factor (TNF)-mediated cell death. Required for normal bone development. Inhibits Wnt signaling.

Danio rerio (taxid: 7955)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9HBH5|RDH14_HUMAN Retinol dehydrogenase 14 OS=Homo sapiens GN=RDH14 PE=1 SV=1

 Score =  185 bits (470), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 118/300 (39%), Positives = 165/300 (55%), Gaps = 26/300 (8%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEI-------PSAK 81
           G T ++TGA+SG+G  TA  L   G  VIM  R+ A  ++    + +E+       P   
Sbjct: 43  GKTVLITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRRELRQAAECGPEPG 102

Query: 82  VDAM------ELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFA 135
           V  +      ELD++SL SVR F  E   +   L++LINNAGI   P+M ++D  E+QF 
Sbjct: 103 VSGVGELIVRELDLASLRSVRAFCQEMLQEEPRLDVLINNAGIFQCPYMKTEDGFEMQFG 162

Query: 136 TNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSF 195
            NHLGHFLLT      +     KSS   RIV VSS+ +++     I FD +N E +YN  
Sbjct: 163 VNHLGHFLLT-----NLLLGLLKSSAPSRIVVVSSKLYKYG---DINFDDLNSEQSYNKS 214

Query: 196 GAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI---LRGFCNTVG 252
             Y +SKLANIL  +ELA+ L  +G N+T N LHPG + TNL R+  I   ++   N V 
Sbjct: 215 FCYSRSKLANILFTRELARRL--EGTNVTVNVLHPGIVRTNLGRHIHIPLLVKPLFNLVS 272

Query: 253 KLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMELAKKLWDFSMNLV 312
               K   +GA T+ Y+A  P+V+GVSG YF D    +   +  +  +A+KLWD S  +V
Sbjct: 273 WAFFKTPVEGAQTSIYLASSPEVEGVSGRYFGDCKEEELLPKAMDESVARKLWDISEVMV 332

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. No steroid dehydrogenase activity detected.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9QYF1|RDH11_MOUSE Retinol dehydrogenase 11 OS=Mus musculus GN=Rdh11 PE=2 SV=2

 Score =  183 bits (465), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/293 (40%), Positives = 171/293 (58%), Gaps = 13/293 (4%)

Query: 21  VTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA 80
            T  +   G  AIVTGA++GIG ETA+ LA RG  V +A R++  G+     I     ++
Sbjct: 30  CTSNVQLPGKVAIVTGANTGIGKETAKDLAQRGARVYLACRDVDKGELAAREIQAVTGNS 89

Query: 81  KVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLG 140
           +V   +LD++   S+R FA ++ ++ + L++LINNAG+M  P+  + D  E+    NHLG
Sbjct: 90  QVFVRKLDLADTKSIRAFAKDFLAEEKHLHLLINNAGVMMCPYSKTADGFEMHIGVNHLG 149

Query: 141 HFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQ 200
           HFLLTHLLL+ +K++A       RIVN+SS  H       I F  +  E  Y++  AY  
Sbjct: 150 HFLLTHLLLEKLKESA-----PSRIVNLSSLGHHLGR---IHFHNLQGEKFYSAGLAYCH 201

Query: 201 SKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIP 260
           SKLANIL  KELAK LK  GV  T  S+HPG++ + L RY+ I+R         V    P
Sbjct: 202 SKLANILFTKELAKRLKGSGV--TTYSVHPGTVHSELTRYSSIMRWLWQLF--FVFIKTP 257

Query: 261 Q-GAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMELAKKLWDFSMNLV 312
           Q GA T+ Y AL   ++ +SG +FSD  +   + QG+N  +A++LWD S +L+
Sbjct: 258 QEGAQTSLYCALTEGLESLSGSHFSDCQLAWVSYQGRNEIIARRLWDVSCDLL 310

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent all-trans-retinal reductase. Also involved in the metabolism of short-chain aldehydes.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: 0

>sp|Q8TC12|RDH11_HUMAN Retinol dehydrogenase 11 OS=Homo sapiens GN=RDH11 PE=1 SV=2

 Score =  181 bits (458), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 114/292 (39%), Positives = 173/292 (59%), Gaps = 11/292 (3%)

Query: 21  VTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA 80
            T  +   G   +VTGA++GIG ETA+ LA RG  V +A R++  G+ V + I     + 
Sbjct: 33  CTSTVQLPGKVVVVTGANTGIGKETAKELAQRGARVYLACRDVEKGELVAKEIQTTTGNQ 92

Query: 81  KVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLG 140
           +V   +LD+S   S+R FA  + ++ + L++LINNAG+M  P+  + D  E+    NHLG
Sbjct: 93  QVLVRKLDLSDTKSIRAFAKGFLAEEKHLHVLINNAGVMMCPYSKTADGFEMHIGVNHLG 152

Query: 141 HFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQ 200
           HFLLTHLLL+ +K++A       RIVNVSS AH       I F  +  E  YN+  AY  
Sbjct: 153 HFLLTHLLLEKLKESA-----PSRIVNVSSLAHHLGR---IHFHNLQGEKFYNAGLAYCH 204

Query: 201 SKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIP 260
           SKLANIL  +ELA+ LK  GV  T  S+HPG++ + L R++  +R +   +    +K   
Sbjct: 205 SKLANILFTQELARRLKGSGV--TTYSVHPGTVQSELVRHSSFMR-WMWWLFSFFIKTPQ 261

Query: 261 QGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMELAKKLWDFSMNLV 312
           QGA T+ + AL   ++ +SG +FSD ++   ++Q +N  +A++LWD S +L+
Sbjct: 262 QGAQTSLHCALTEGLEILSGNHFSDCHVAWVSAQARNETIARRLWDVSCDLL 313

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity towards 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: 0

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	313
225464515	313	PREDICTED: short-chain dehydrogenase TIC	1.0	1.0	0.824	1e-151
388510126	313	unknown [Lotus japonicus]	1.0	1.0	0.792	1e-146
75291901	316	RecName: Full=Short-chain dehydrogenase	1.0	0.990	0.783	1e-144
363814467	313	uncharacterized protein LOC100796920 [Gl	1.0	1.0	0.773	1e-143
225426446	315	PREDICTED: short-chain dehydrogenase TIC	1.0	0.993	0.782	1e-142
359490491	313	PREDICTED: short-chain dehydrogenase TIC	0.993	0.993	0.778	1e-140
359490488	313	PREDICTED: short-chain dehydrogenase TIC	1.0	1.0	0.753	1e-139
255545238	313	short-chain dehydrogenase, putative [Ric	0.996	0.996	0.782	1e-139
449456313	313	PREDICTED: short-chain dehydrogenase TIC	1.0	1.0	0.753	1e-138
358248796	349	uncharacterized protein LOC100783465 [Gl	1.0	0.896	0.753	1e-138

>gi|225464515|ref|XP_002270104.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Vitis vinifera] gi|302143828|emb|CBI22689.3| unnamed protein product [Vitis vinifera]

 Score =  541 bits (1393), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 258/313 (82%), Positives = 286/313 (91%)

Query: 1   MWLFSRKGPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAV 60
           MW FSRKGPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTET RVLALRGVHV+M V
Sbjct: 1   MWWFSRKGPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETTRVLALRGVHVVMGV 60

Query: 61  RNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMA 120
           RNM+AGK+V+EAIVKEIP+AKVDAMELD+SS+ASVRKFASEYNS G PLNILINNAGIMA
Sbjct: 61  RNMSAGKEVKEAIVKEIPTAKVDAMELDLSSMASVRKFASEYNSSGLPLNILINNAGIMA 120

Query: 121 SPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG 180
            P+MLSKDNIE+QFATNHLGHFLLT+LLLDTMKKT +KS +EGRIVNVSS AHR+ Y EG
Sbjct: 121 VPYMLSKDNIEMQFATNHLGHFLLTNLLLDTMKKTTRKSRKEGRIVNVSSMAHRYPYREG 180

Query: 181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY 240
           IRFDKIND+S Y+S  AYGQSKLAN+LHA ELA+  KEDGV+ITANSLHPG+IVTNLFR 
Sbjct: 181 IRFDKINDKSGYSSLFAYGQSKLANVLHANELARRFKEDGVDITANSLHPGAIVTNLFRC 240

Query: 241 NGILRGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMEL 300
           + I+ G  NTVGKLVLKN+ QGAATTCYVALHPQV+GVSG+YFSD NI KP+SQ ++ EL
Sbjct: 241 SSIVSGLVNTVGKLVLKNVQQGAATTCYVALHPQVKGVSGQYFSDCNIAKPSSQAKDPEL 300

Query: 301 AKKLWDFSMNLVK 313
           AKKLW+FSMNLVK
Sbjct: 301 AKKLWEFSMNLVK 313

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388510126|gb|AFK43129.1| unknown [Lotus japonicus]

 Score =  523 bits (1348), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 248/313 (79%), Positives = 280/313 (89%)

Query: 1   MWLFSRKGPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAV 60
           MW FS+KGPSGFS+SSTAE+VTQGIDGTGLTA+VTGASSGIGTET RVLA RGVHVIM V
Sbjct: 1   MWPFSKKGPSGFSSSSTAEQVTQGIDGTGLTAVVTGASSGIGTETTRVLAKRGVHVIMGV 60

Query: 61  RNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMA 120
           RN AAGKDV+E I+KE PSAKVDAMELD+SS+ SV+KFASEY S G PLNILINNAGIMA
Sbjct: 61  RNTAAGKDVKETILKENPSAKVDAMELDLSSMESVKKFASEYKSSGLPLNILINNAGIMA 120

Query: 121 SPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG 180
            PFMLSKDN ELQFATNHLGHFLLT+LLLDTMKKT+++S +EGRIV VSSEAHRFAYSEG
Sbjct: 121 CPFMLSKDNHELQFATNHLGHFLLTNLLLDTMKKTSRESKKEGRIVIVSSEAHRFAYSEG 180

Query: 181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY 240
           IRFDKIND+S+YN++ AYGQSKLANILHA EL KHLKEDGV+ITANSLHPG+I TNLFRY
Sbjct: 181 IRFDKINDQSSYNNWRAYGQSKLANILHANELTKHLKEDGVDITANSLHPGTITTNLFRY 240

Query: 241 NGILRGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMEL 300
           N  + G  N VG++V+KN+ QGAATTCYVALHP+V+GVSG+YFSDSN+ K    G + +L
Sbjct: 241 NSAVNGIINVVGRMVMKNVQQGAATTCYVALHPEVKGVSGKYFSDSNVSKTTPHGTDADL 300

Query: 301 AKKLWDFSMNLVK 313
           AKKLWDFSMNL+K
Sbjct: 301 AKKLWDFSMNLIK 313

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|75291901|sp|Q6RVV4.1|TIC32_PEA RecName: Full=Short-chain dehydrogenase TIC 32, chloroplastic; AltName: Full=Translocon at the inner envelope membrane of chloroplasts 32; Short=PsTIC32 gi|42725482|gb|AAS38575.1| short-chain dehydrogenase Tic32 [Pisum sativum]

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 246/314 (78%), Positives = 280/314 (89%), Gaps = 1/314 (0%)

Query: 1   MWLFS-RKGPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMA 59
           MW FS +KG SGFS SSTAE+VT GID TGLTAIVTGASSGIG ET RVLALRG HVIM 
Sbjct: 1   MWPFSSKKGVSGFSGSSTAEQVTHGIDATGLTAIVTGASSGIGAETTRVLALRGAHVIMG 60

Query: 60  VRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIM 119
           VRNM A KDV++ I+K+IPSAKVDA+ELD+SSL SV+KFASE+NS GRPLNILINNAGIM
Sbjct: 61  VRNMVAAKDVKDTILKDIPSAKVDAIELDLSSLDSVKKFASEFNSSGRPLNILINNAGIM 120

Query: 120 ASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSE 179
           A PF LSKDNIELQFATNH+GHFLLT+LLLDTMKKT ++S +EGRIVNV+SEAHRFAY E
Sbjct: 121 ACPFKLSKDNIELQFATNHIGHFLLTNLLLDTMKKTTRESKKEGRIVNVASEAHRFAYPE 180

Query: 180 GIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
           GIRFDKIND+S+YN++ AYGQSKLAN+LHA +L KHLKEDGVNITANSLHPG+IVTNLFR
Sbjct: 181 GIRFDKINDQSSYNNWRAYGQSKLANVLHANQLTKHLKEDGVNITANSLHPGTIVTNLFR 240

Query: 240 YNGILRGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNME 299
           +N  + G  N +GKLVLKN+ QGAATTCYVALHPQV+GVSGEYFSDSN+YK    G++++
Sbjct: 241 HNSAVNGLINVIGKLVLKNVQQGAATTCYVALHPQVKGVSGEYFSDSNVYKTTPHGKDVD 300

Query: 300 LAKKLWDFSMNLVK 313
           LAKKLWDFS+NLVK
Sbjct: 301 LAKKLWDFSINLVK 314

Source: Pisum sativum

Species: Pisum sativum

Genus: Pisum

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363814467|ref|NP_001242868.1| uncharacterized protein LOC100796920 [Glycine max] gi|255638702|gb|ACU19656.1| unknown [Glycine max]

 Score =  513 bits (1322), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 242/313 (77%), Positives = 278/313 (88%)

Query: 1   MWLFSRKGPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAV 60
           MWLF RKG SGFS+SSTAE+VT+GIDGTG TAIVTGASSGIGTET RVLALRGVHVIM V
Sbjct: 1   MWLFGRKGASGFSSSSTAEQVTEGIDGTGFTAIVTGASSGIGTETTRVLALRGVHVIMGV 60

Query: 61  RNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMA 120
           RNM A KDV+E I+KEIPSAKVDAMELD+SS+ SVRKFASE+ S G PLNILINNAGIMA
Sbjct: 61  RNMLAAKDVKETILKEIPSAKVDAMELDLSSMKSVRKFASEFKSSGLPLNILINNAGIMA 120

Query: 121 SPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG 180
            PF LSKD IELQFATNH+GHFLLT+LLLDT+KKT+++S +EGRIVNVSSEAHRFAYSEG
Sbjct: 121 CPFSLSKDKIELQFATNHIGHFLLTNLLLDTIKKTSRESKKEGRIVNVSSEAHRFAYSEG 180

Query: 181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY 240
           I FDKINDES+Y+++ AYGQSKLANILHA EL + LKEDGV+I+ANSLHPG+I TNLFR+
Sbjct: 181 ICFDKINDESSYDNWRAYGQSKLANILHANELTRRLKEDGVDISANSLHPGTITTNLFRH 240

Query: 241 NGILRGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMEL 300
           N  + G  N +G+LVLKN+ QGAATTCYVALHPQV+G+SG+YFSDSN+ K  +QG + +L
Sbjct: 241 NSAVNGLINVIGRLVLKNVQQGAATTCYVALHPQVKGISGKYFSDSNLAKTTAQGTDSDL 300

Query: 301 AKKLWDFSMNLVK 313
           AKKLWDFSM+L K
Sbjct: 301 AKKLWDFSMDLTK 313

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225426446|ref|XP_002274932.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic isoform 1 [Vitis vinifera] gi|297742509|emb|CBI34658.3| unnamed protein product [Vitis vinifera]

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 245/313 (78%), Positives = 277/313 (88%)

Query: 1   MWLFSRKGPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAV 60
           MW+F RKGPSGFSA STAEEV QGIDG GLTA+VTGASSGIGTET+RVLAL GVHVIMAV
Sbjct: 1   MWIFGRKGPSGFSACSTAEEVAQGIDGNGLTAVVTGASSGIGTETSRVLALHGVHVIMAV 60

Query: 61  RNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMA 120
           RN+ AG++V+E I+KEIP+AKVD MELD+SSL SVRKFASEY S G PLN+LINNAG+MA
Sbjct: 61  RNVDAGRNVKETILKEIPTAKVDVMELDLSSLPSVRKFASEYKSLGLPLNLLINNAGVMA 120

Query: 121 SPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG 180
           +PF+LS DNIELQFATNHLGHFLLT+LLL+TMK TA++S REGRIVNVSSE HRF YSEG
Sbjct: 121 TPFLLSHDNIELQFATNHLGHFLLTNLLLETMKNTARESGREGRIVNVSSEGHRFPYSEG 180

Query: 181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY 240
           I FDKINDESAYNS  AYGQSKLANILHA ELAK L+E+GV ITANSLHPG+I TNL RY
Sbjct: 181 ICFDKINDESAYNSVYAYGQSKLANILHANELAKRLQEEGVEITANSLHPGAIATNLLRY 240

Query: 241 NGILRGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMEL 300
           +  L G  N VGK VLKNIPQGAATTCYVALHPQV+GVSGEYF+DSNI KP+S+G++ EL
Sbjct: 241 HSFLDGIVNMVGKYVLKNIPQGAATTCYVALHPQVKGVSGEYFADSNIAKPSSKGKDAEL 300

Query: 301 AKKLWDFSMNLVK 313
            KKLW+FS++L +
Sbjct: 301 GKKLWEFSISLTE 313

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359490491|ref|XP_003634099.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like [Vitis vinifera] gi|302143829|emb|CBI22690.3| unnamed protein product [Vitis vinifera]

 Score =  503 bits (1295), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 243/312 (77%), Positives = 272/312 (87%), Gaps = 1/312 (0%)

Query: 1   MWLFSRKGPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAV 60
           MWLFSRKG SGFS SSTAEEVTQGIDGTGLTAIVTGASSGIGTET RVLALRGVHV+M V
Sbjct: 1   MWLFSRKGASGFSGSSTAEEVTQGIDGTGLTAIVTGASSGIGTETTRVLALRGVHVVMGV 60

Query: 61  RNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMA 120
           RNMAAG++V+EAIVKEIP+AKVD MELD+SS+ASVRKFASE+NS G PLNILINNAG   
Sbjct: 61  RNMAAGQEVKEAIVKEIPTAKVDVMELDLSSMASVRKFASEFNSSGLPLNILINNAGTTG 120

Query: 121 SPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG 180
            P+MLSKDNIE+ FATNHLGHFLLT LLLDTMKKT Q+S +EGRIV VSSE HRF Y  G
Sbjct: 121 -PYMLSKDNIEMLFATNHLGHFLLTSLLLDTMKKTTQESGKEGRIVIVSSEGHRFTYRGG 179

Query: 181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY 240
           IRFD IND+S Y+S  AYGQSKLAN+LHA ELA+  KEDGV+ITANSLHPG+IVTN+FR+
Sbjct: 180 IRFDNINDKSGYSSPFAYGQSKLANVLHANELARRFKEDGVDITANSLHPGAIVTNIFRH 239

Query: 241 NGILRGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMEL 300
           + IL G  NTVGK VLKN+ QGAATTCYVALHPQV+GVSG+YFSD NI KP +Q ++ EL
Sbjct: 240 SSILSGLVNTVGKYVLKNVQQGAATTCYVALHPQVKGVSGQYFSDCNIAKPGAQAKDPEL 299

Query: 301 AKKLWDFSMNLV 312
           AKKLW+FS  L+
Sbjct: 300 AKKLWEFSTGLI 311

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359490488|ref|XP_002272242.2| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like [Vitis vinifera] gi|147792549|emb|CAN65620.1| hypothetical protein VITISV_040852 [Vitis vinifera] gi|302143827|emb|CBI22688.3| unnamed protein product [Vitis vinifera]

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 236/313 (75%), Positives = 278/313 (88%)

Query: 1   MWLFSRKGPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAV 60
           MW F R G SGFSASSTA EVT GIDGTGLTAIVTGASSGIGTETARVLALRGVHV+MAV
Sbjct: 1   MWWFGRNGASGFSASSTAVEVTHGIDGTGLTAIVTGASSGIGTETARVLALRGVHVVMAV 60

Query: 61  RNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMA 120
           RNMAAG++V+EAI KEIP+AK+DAMELD+SS+ASVRKFASE++S G PLN+LINNAG+MA
Sbjct: 61  RNMAAGREVKEAIAKEIPTAKIDAMELDLSSMASVRKFASEFSSSGLPLNLLINNAGLMA 120

Query: 121 SPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG 180
           +PFMLSKDNIELQFATNH+GHFLLT+LLL+TMKKTA++S++EGRIVNVSS  HRF+Y EG
Sbjct: 121 TPFMLSKDNIELQFATNHIGHFLLTNLLLETMKKTARESNKEGRIVNVSSRRHRFSYHEG 180

Query: 181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY 240
           IRFD IND+S YN   AYGQSKLAN+LHA EL++ LK+DG NITANSLHPG+I TNLFR+
Sbjct: 181 IRFDMINDQSGYNRLSAYGQSKLANVLHANELSRRLKDDGANITANSLHPGAIATNLFRH 240

Query: 241 NGILRGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMEL 300
             ++ GF +  GK V+KN+ QGAATTCYVALHP+V+G +GEYF+DSNI K +SQ  + EL
Sbjct: 241 VPLVGGFIDIFGKYVVKNVQQGAATTCYVALHPEVKGTTGEYFADSNIAKGSSQANDPEL 300

Query: 301 AKKLWDFSMNLVK 313
           AKKLWDFS++L+K
Sbjct: 301 AKKLWDFSLSLIK 313

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255545238|ref|XP_002513680.1| short-chain dehydrogenase, putative [Ricinus communis] gi|223547588|gb|EEF49083.1| short-chain dehydrogenase, putative [Ricinus communis]

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 244/312 (78%), Positives = 284/312 (91%)

Query: 1   MWLFSRKGPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAV 60
           MWLFS+K PSGFS+SSTAE+VTQGIDG+GLTAIVTGASSGIGTET RVLA  GVHV+MAV
Sbjct: 1   MWLFSKKSPSGFSSSSTAEQVTQGIDGSGLTAIVTGASSGIGTETTRVLASCGVHVVMAV 60

Query: 61  RNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMA 120
           RN+ +G++V+E I+KEIP+AKVDAMELD+SS+ASVRKFAS++NS G PLNILINNAG+MA
Sbjct: 61  RNLVSGRNVKETIIKEIPTAKVDAMELDLSSMASVRKFASDFNSSGLPLNILINNAGVMA 120

Query: 121 SPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG 180
           +PFMLSKDNIELQFATNHLGHFLLT+LLLDTMKKTA +S+REGRIVNVSSEAHR++Y EG
Sbjct: 121 TPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTAHQSNREGRIVNVSSEAHRYSYHEG 180

Query: 181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY 240
           IRFDKIND S Y+SF AYGQSKLAN+LHA EL + LKEDGVNITANSLHPG+IVTNLFR+
Sbjct: 181 IRFDKINDRSGYSSFRAYGQSKLANVLHANELTRRLKEDGVNITANSLHPGAIVTNLFRH 240

Query: 241 NGILRGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMEL 300
             I+ G  N +GKLVLKN+ QGAATTCYVA+HPQV+G+SGEYFSDSN+ K ++ G+++EL
Sbjct: 241 MNIINGMVNVLGKLVLKNVQQGAATTCYVAMHPQVKGISGEYFSDSNLAKASAHGRDVEL 300

Query: 301 AKKLWDFSMNLV 312
            KKLWDFSM LV
Sbjct: 301 GKKLWDFSMKLV 312

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449456313|ref|XP_004145894.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like [Cucumis sativus]

 Score =  496 bits (1276), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 236/313 (75%), Positives = 270/313 (86%)

Query: 1   MWLFSRKGPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAV 60
           MWLF RKGPSGFS+SSTAEEVT GIDGTGLTAIVTGASSGIG+ETARVLALRGVHVIM V
Sbjct: 1   MWLFRRKGPSGFSSSSTAEEVTDGIDGTGLTAIVTGASSGIGSETARVLALRGVHVIMGV 60

Query: 61  RNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMA 120
           RN+ AG++VRE IVKE PSAK+DAMELD+SS+ SVRKFAS+Y S G PLNILINNAGIMA
Sbjct: 61  RNLEAGRNVRETIVKENPSAKIDAMELDLSSMVSVRKFASDYQSSGFPLNILINNAGIMA 120

Query: 121 SPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG 180
           +PF LSKDNIE+QFATNH+GHFLLT+LLL+ MKKTA +S +EGRIVNVSSEAHR+ Y EG
Sbjct: 121 TPFGLSKDNIEVQFATNHIGHFLLTNLLLENMKKTAAESKKEGRIVNVSSEAHRYTYPEG 180

Query: 181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY 240
           IRFD INDE  YN   AYGQSKL+NILHA EL +  KE+G+NITANSLHPG I TNLFR+
Sbjct: 181 IRFDGINDELRYNKMQAYGQSKLSNILHANELTRRFKEEGLNITANSLHPGIITTNLFRH 240

Query: 241 NGILRGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMEL 300
                G  NTVGK++ KN+ QGAATTCYVALHPQV+GVSGEYF +SN++K    GQ+M+L
Sbjct: 241 FNYGNGIVNTVGKIMFKNVQQGAATTCYVALHPQVKGVSGEYFMNSNVHKATQHGQDMDL 300

Query: 301 AKKLWDFSMNLVK 313
           AKKLW+F+ NL+K
Sbjct: 301 AKKLWEFTTNLLK 313

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248796|ref|NP_001240197.1| uncharacterized protein LOC100783465 [Glycine max] gi|255644813|gb|ACU22908.1| unknown [Glycine max]

 Score =  495 bits (1275), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 236/313 (75%), Positives = 271/313 (86%)

Query: 1   MWLFSRKGPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAV 60
           MW FSRKG SGFS+SSTAE+VT+GIDGTGLTAIVTGASSGIGTET RVL+LRGVHVIM V
Sbjct: 37  MWPFSRKGASGFSSSSTAEQVTEGIDGTGLTAIVTGASSGIGTETTRVLSLRGVHVIMGV 96

Query: 61  RNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMA 120
           RNM A KDV+E ++KEIPSAKVDAMELD+SSL SV+KFASE+ S G PLN+LINNAGIMA
Sbjct: 97  RNMLAAKDVKETLLKEIPSAKVDAMELDLSSLESVKKFASEFKSSGLPLNMLINNAGIMA 156

Query: 121 SPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG 180
            PF LSKD IELQFATNHLGHFLLT+LLLDTMKKT++++ +EGRIVNVSSEAHRF YSEG
Sbjct: 157 CPFKLSKDKIELQFATNHLGHFLLTNLLLDTMKKTSRETKKEGRIVNVSSEAHRFTYSEG 216

Query: 181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY 240
           IRFDKINDES+Y+++ AYGQSKLANILHA EL + LKEDGV+I+ANSLHPG I TNL R+
Sbjct: 217 IRFDKINDESSYSNWRAYGQSKLANILHANELTRRLKEDGVDISANSLHPGVIATNLSRH 276

Query: 241 NGILRGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMEL 300
              + G    + +LVLKN+ QGAATTCYVALHPQV+G SG+YFS SN+ K  SQG + +L
Sbjct: 277 ISPVNGLTKAIARLVLKNVQQGAATTCYVALHPQVKGTSGKYFSASNVAKTTSQGTDADL 336

Query: 301 AKKLWDFSMNLVK 313
           AK LWDFSM+L K
Sbjct: 337 AKNLWDFSMDLTK 349

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	313
TAIR|locus:2117969	322	Tic32-IVa "translocon at the i	0.993	0.965	0.701	9.7e-112
TAIR|locus:2123066	317	AT4G11410 [Arabidopsis thalian	0.993	0.981	0.700	2e-111
TAIR|locus:2181778	331	AT5G02540 [Arabidopsis thalian	0.980	0.927	0.553	2e-88
TAIR|locus:2040676	321	AT2G37540 [Arabidopsis thalian	0.980	0.956	0.543	3.8e-85
TAIR|locus:2134971	332	AT4G24050 [Arabidopsis thalian	0.993	0.936	0.429	1.8e-62
TAIR|locus:2170071	339	AT5G50130 [Arabidopsis thalian	0.974	0.899	0.456	3e-62
TAIR|locus:2019474	334	AT1G64590 [Arabidopsis thalian	0.987	0.925	0.417	1.4e-57
UNIPROTKB|F1NXW7	414	WWOX "WW domain-containing oxi	0.942	0.712	0.374	6.2e-46
UNIPROTKB|Q5F389	414	WWOX "WW domain-containing oxi	0.942	0.712	0.374	6.2e-46
FB|FBgn0033204	300	CG2065 [Drosophila melanogaste	0.881	0.92	0.405	2.7e-45

TAIR|locus:2117969 Tic32-IVa "translocon at the inner envelope membrane of chloroplasts 32-IVa" [Arabidopsis thaliana (taxid:3702)]

 Score = 1103 (393.3 bits), Expect = 9.7e-112, P = 9.7e-112
 Identities = 219/312 (70%), Positives = 250/312 (80%)

Query:     1 MWLFSRKGPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAV 60
             MW F  KG SGFS+ STAEEVT G+DGTGLTAIVTGASSGIG ETARVL+LRGVHV+MAV
Sbjct:     1 MWFFGSKGASGFSSRSTAEEVTHGVDGTGLTAIVTGASSGIGVETARVLSLRGVHVVMAV 60

Query:    61 RNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMA 120
             RN  +G  V+E IVK++P AK+D MELD+SS+ SVRKFASEY S G PLN+LINNAGIMA
Sbjct:    61 RNTDSGAKVKEDIVKQVPGAKLDVMELDLSSMQSVRKFASEYKSTGLPLNLLINNAGIMA 120

Query:   121 SPFMLSKDNIELQFATNXXXXXXXXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG 180
              PFMLSKDNIELQFATN            DTMK T+++S REGRIVN+SSEAHRF+Y EG
Sbjct:   121 CPFMLSKDNIELQFATNHLGHFLLTKLLLDTMKSTSRESKREGRIVNLSSEAHRFSYPEG 180

Query:   181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY 240
             +RFDKIND+S+Y+S  AYGQSKL N+LHA EL K LKEDGVNITANSLHPG+I+TNL RY
Sbjct:   181 VRFDKINDKSSYSSMRAYGQSKLCNVLHANELTKQLKEDGVNITANSLHPGAIMTNLGRY 240

Query:   241 -NGILRGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNME 299
              N  L      V K +LK++PQGAATTCYVAL+PQV GVSGEYF DSNI KP    ++ E
Sbjct:   241 FNPYLAVAVGAVAKYILKSVPQGAATTCYVALNPQVAGVSGEYFQDSNIAKPLPLVKDTE 300

Query:   300 LAKKLWDFSMNL 311
             LAKK+WDFS  L
Sbjct:   301 LAKKVWDFSTKL 312

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0009706 "chloroplast inner membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2123066 AT4G11410 [Arabidopsis thaliana (taxid:3702)]

 Score = 1100 (392.3 bits), Expect = 2.0e-111, P = 2.0e-111
 Identities = 218/311 (70%), Positives = 247/311 (79%)

Query:     1 MWLFSRKGPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAV 60
             MW F  KG SGFSA STAEEVT GIDGTGLTAIVTGASSGIG ET RVLALRGVHV+MAV
Sbjct:     1 MWPFWWKGASGFSARSTAEEVTHGIDGTGLTAIVTGASSGIGEETTRVLALRGVHVVMAV 60

Query:    61 RNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMA 120
             RN  +G  VR+ I+KEIP AK+D M+LD+SS+ASVR FASEY S   PLN+LINNAGIMA
Sbjct:    61 RNTDSGNQVRDKILKEIPQAKIDVMKLDLSSMASVRSFASEYQSLDLPLNLLINNAGIMA 120

Query:   121 SPFMLSKDNIELQFATNXXXXXXXXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG 180
              PF+LS DNIELQFATN            + MKKTA +S+REGRIV VSSE HRFAY EG
Sbjct:   121 CPFLLSSDNIELQFATNHLGHFLLTNLLLERMKKTASESNREGRIVIVSSEGHRFAYREG 180

Query:   181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY 240
             ++FDKINDE+ YN+  AYGQSKL NILHA ELA+  KE GVNITANSLHPGSI+TNL RY
Sbjct:   181 VQFDKINDEARYNTLQAYGQSKLGNILHATELARLFKEQGVNITANSLHPGSIMTNLLRY 240

Query:   241 NGILRGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMEL 300
             +  +    N VGK VLK+IPQGAATTCY ALHPQ +GVSGEY  D+NI  PNSQG++ +L
Sbjct:   241 HSFINTIGNAVGKYVLKSIPQGAATTCYAALHPQAKGVSGEYLMDNNISDPNSQGKDKDL 300

Query:   301 AKKLWDFSMNL 311
             AKKLW+FS+ L
Sbjct:   301 AKKLWEFSLRL 311

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2181778 AT5G02540 [Arabidopsis thaliana (taxid:3702)]

 Score = 883 (315.9 bits), Expect = 2.0e-88, P = 2.0e-88
 Identities = 170/307 (55%), Positives = 225/307 (73%)

Query:     6 RKGPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAA 65
             R+GPSGF ++STAEEVTQGID T LTAI+TG + GIG ETARVL+ RG HV++  RNM A
Sbjct:    10 RRGPSGFGSASTAEEVTQGIDATNLTAIITGGTGGIGMETARVLSKRGAHVVIGARNMGA 69

Query:    66 GKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFML 125
              ++ +  I+++  +A+V  ++LD+SS+ S++ F  E+++   PLN+LINNAG+M  P+ L
Sbjct:    70 AENAKTEILRQNANARVTLLQLDLSSIKSIKAFVREFHALHLPLNLLINNAGVMFCPYQL 129

Query:   126 SKDNIELQFATNXXXXXXXXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDK 185
             S+D IELQFATN            DTMK TA+ S  EGRI+NVSS AH + Y EGI+FD 
Sbjct:   130 SEDGIELQFATNHIGHFLLTNLLLDTMKNTAKTSGVEGRILNVSSVAHIYTYQEGIQFDS 189

Query:   186 INDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILR 245
             IND  +Y+   AYGQSKLANILHA EL++ L+E+GVNITANS+HPG I+TNLF++  +L 
Sbjct:   190 INDICSYSDKRAYGQSKLANILHANELSRQLQEEGVNITANSVHPGLILTNLFQHTALLM 249

Query:   246 GFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMELAKKLW 305
              F       + KNIPQGAATTCYVALHP V+GV+G+YF+D N   P+   ++  LA+KLW
Sbjct:   250 RFLKFFSFYLWKNIPQGAATTCYVALHPSVKGVTGKYFADCNEVTPSKLARDETLAQKLW 309

Query:   306 DFSMNLV 312
             DFS+ L+
Sbjct:   310 DFSVKLI 316

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2040676 AT2G37540 [Arabidopsis thaliana (taxid:3702)]

 Score = 852 (305.0 bits), Expect = 3.8e-85, P = 3.8e-85
 Identities = 167/307 (54%), Positives = 218/307 (71%)

Query:     6 RKGPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAA 65
             +KG SGF ++STAE+VTQ ID + LTAI+TG +SGIG E ARVLA+RG HVI+A RN  A
Sbjct:    10 KKGKSGFGSASTAEDVTQAIDASHLTAIITGGTSGIGLEAARVLAMRGAHVIIAARNPKA 69

Query:    66 GKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFML 125
               + +E I++  P+A+VD +++DVSS+ SVR F  ++ +   PLNILINNAG+M  PF L
Sbjct:    70 ANESKEMILQMNPNARVDYLQIDVSSIKSVRSFVDQFLALNVPLNILINNAGVMFCPFKL 129

Query:   126 SKDNIELQFATNXXXXXXXXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDK 185
             ++D IE QFATN            D MK TA++S  +GRIVN+SS AH + YSEGI+F  
Sbjct:   130 TEDGIESQFATNHIGHFLLTNLLLDKMKSTARESGVQGRIVNLSSIAHTYTYSEGIKFQG 189

Query:   186 INDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILR 245
             IND + Y+   AYGQSKL+N+LH+  L++ L+E+GVNIT NS+HPG + TNLFRY+G   
Sbjct:   190 INDPAGYSERRAYGQSKLSNLLHSNALSRRLQEEGVNITINSVHPGLVTTNLFRYSGFSM 249

Query:   246 GFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMELAKKLW 305
                  +  L  KNIPQGAATTCYVALHP ++GV+G+YF D NI  P+    N  LA KLW
Sbjct:   250 KVFRAMTFLFWKNIPQGAATTCYVALHPDLEGVTGKYFGDCNIVAPSKFATNNSLADKLW 309

Query:   306 DFSMNLV 312
             DFS+ L+
Sbjct:   310 DFSVFLI 316

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0009860 "pollen tube growth" evidence=IEP

TAIR|locus:2134971 AT4G24050 [Arabidopsis thaliana (taxid:3702)]

 Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
 Identities = 135/314 (42%), Positives = 194/314 (61%)

Query:     2 WLFSRKGPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVR 61
             +L    G SGF + STAEEVT+  D   +TA++TGA+SGIG ETARVLA RG  +I   R
Sbjct:     7 YLLGAAGASGFGSKSTAEEVTENCDLRSITAVITGATSGIGAETARVLAKRGARLIFPAR 66

Query:    62 NMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMAS 121
             N+ A ++ +E IV E P  ++  M+LD+SS+ASVR F +++ S   PLN+LINNAG +A 
Sbjct:    67 NVKAAEEAKERIVSEFPETEIVVMKLDLSSIASVRNFVADFESLDLPLNLLINNAGKLAH 126

Query:   122 PFMLSKDNIELQFATNXXXXXXXXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI 181
                +S+D IE+ FATN            + M +TA+++  +GRIVNV+S  H +   + I
Sbjct:   127 EHAISEDGIEMTFATNYLGHFLLTNLLLNKMIQTAEETGVQGRIVNVTSGIHGWFSGDLI 186

Query:   182 RFDKI--NDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
              + ++    +  +++  AY  SKLAN+LH KEL+  L++ G N+T N +HPG + T L R
Sbjct:   187 EYLRLISQPKCQFDATRAYALSKLANVLHTKELSSRLQKIGANVTVNCVHPGVVRTRLTR 246

Query:   240 -YNGILRGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNM 298
                G+L      +   ++K +PQ AATTCYVA +P++  VSG+YF+D N   P+  G N 
Sbjct:   247 DREGLLTDLVFFLASKLVKTVPQAAATTCYVATNPRLVNVSGKYFTDCNETTPSGLGTNS 306

Query:   299 ELAKKLWDFSMNLV 312
               A KLW  S  LV
Sbjct:   307 SEATKLWAASEILV 320

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2170071 AT5G50130 [Arabidopsis thaliana (taxid:3702)]

 Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
 Identities = 141/309 (45%), Positives = 193/309 (62%)

Query:     8 GPSGFSASSTAEEVTQG--IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAA 65
             GP+GF + STAE+VTQ      + LTAI+TG +SGIG ETARVLA RGV V+MAVR+M  
Sbjct:    13 GPNGFGSRSTAEQVTQHSFFPCSHLTAIITGGTSGIGAETARVLAKRGVRVVMAVRDMKK 72

Query:    66 GKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFML 125
              + V+E I++E P A +   E+D+SSL+SV +F S++ SQ  PLNILINNAG+ +     
Sbjct:    73 AEMVKERIIRENPEADIILFEIDLSSLSSVARFCSQFLSQDLPLNILINNAGVFSPNLEF 132

Query:   126 SKDNIELQFATNXXXXXXXXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDK 185
             S++ IEL FATN            + M  TA+KS  EGRI+N+SS  H +   +   F K
Sbjct:   133 SEEKIELTFATNFLGHYLLTEMLIEKMIDTAEKSGIEGRIINLSSVIHNWVKPDCFSFPK 192

Query:   186 I-NDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR-YNGI 243
             + +  S YN   AY QSKLA ILHAK L+K LK+   N+T N++HPG + T + R + G+
Sbjct:   193 LLHPISRYNGTRAYAQSKLATILHAKALSKQLKDRNANVTINAVHPGIVKTGIIRAHKGL 252

Query:   244 LRGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMELAKK 303
                    +   +LK+I QGAATTCYVAL  + +G+SG+YF+D N    +    +  +A K
Sbjct:   253 FTDSLFLIASKLLKSISQGAATTCYVALSNETKGLSGKYFADCNETNCSDLANDEYVALK 312

Query:   304 LWDFSMNLV 312
             L   S  L+
Sbjct:   313 LCTQSRALI 321

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2019474 AT1G64590 [Arabidopsis thaliana (taxid:3702)]

 Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
 Identities = 131/314 (41%), Positives = 189/314 (60%)

Query:     3 LFSRKGPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRN 62
             L    GPSGF + STA+ VT   D   LTAI+TGA+SGIG ETARVLA RG  +++  R+
Sbjct:     8 LIGSGGPSGFGSRSTADHVTCNSDLRSLTAIITGATSGIGAETARVLAKRGARLVLPARS 67

Query:    63 MAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASP 122
             +   ++ +  I+ E P A++  M LD+SSL SVR+F  ++ S   PLNILINNAG  A  
Sbjct:    68 VKTAEETKARILSEFPDAEIIVMHLDLSSLTSVRRFVDDFESLNLPLNILINNAGKYAHK 127

Query:   123 FMLSKDNIELQFATNXXXXXXXXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR 182
               LS+D +E+ FATN              M +TA ++  +GRIVNV+S  H +   + ++
Sbjct:   128 HALSEDGVEMTFATNYLGHFLLTKLLLKKMIETAAQTGVQGRIVNVTSVVHSWFSGDMLQ 187

Query:   183 F--DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR- 239
             +  D   +   Y++  AY  SKLAN+LH  EL++ L +   N+TAN +HPG + T L R 
Sbjct:   188 YLADISRNNRNYDATRAYALSKLANVLHTVELSRLLHKMDANVTANCVHPGIVKTRLTRD 247

Query:   240 YNGILRGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQ-NM 298
               G++      +   +LK++PQ AATTCYVA  P+++ V G+YFSD N  + +  G  N+
Sbjct:   248 REGVVTDLVFFLTSKLLKSVPQAAATTCYVATSPRLRNVCGKYFSDCNEARSSKSGSCNL 307

Query:   299 ELAKKLWDFSMNLV 312
             + A++LW  S  LV
Sbjct:   308 K-AQRLWTASDLLV 320

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

UNIPROTKB|F1NXW7 WWOX "WW domain-containing oxidoreductase" [Gallus gallus (taxid:9031)]

 Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
 Identities = 115/307 (37%), Positives = 177/307 (57%)

Query:    12 FSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVRE 71
             +  +STA E+ QG D +G   I+TGA+SGIG ETA+  AL G +VI+A RNM+ G D  +
Sbjct:   107 YDGNSTAMEILQGRDLSGKVIIITGANSGIGFETAKSFALHGAYVILACRNMSRGNDAVQ 166

Query:    72 AIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIE 131
              I++E   AKV+AM LD++SL SV+ FA  + S+  PL+IL+ NA I  S + L++D +E
Sbjct:   167 RILEEWHKAKVEAMTLDLASLRSVQNFAEAFKSKNMPLHILVCNAAIFGSSWCLTEDGLE 226

Query:   132 LQFATNXXXXXXXXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAY---SEG-IRFDKIN 187
               F  N            D +++     S   R+V VSSE+HRF     S G + F  ++
Sbjct:   227 STFQVNHLGHFYLVQLLEDILRR-----SSPARVVVVSSESHRFTEIKDSSGKLGFSLLS 281

Query:   188 -DESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRG 246
               +  Y +  AY +SKL NIL + EL + L   GV  T+NS+HPG+++ +    N  +  
Sbjct:   282 PSKKEYWAMLAYNRSKLCNILFSNELNRRLSPHGV--TSNSVHPGNMIYSSIHRNWWVYT 339

Query:   247 FCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMELAKKLWD 306
                T+ +   K++ QGAATT Y A   +++G+ G YF++     P+++ +N   A  LW+
Sbjct:   340 LLFTLARPFTKSMQQGAATTVYCATAAELEGLGGMYFNNCCRCLPSAEARNELTAVALWE 399

Query:   307 FSMNLVK 313
              S  L++
Sbjct:   400 LSERLIR 406

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0001649 "osteoblast differentiation" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005902 "microvillus" evidence=IEA

GO:0006917 "induction of apoptosis" evidence=IEA

GO:0019899 "enzyme binding" evidence=IEA

GO:0030178 "negative regulation of Wnt receptor signaling pathway" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0048705 "skeletal system morphogenesis" evidence=IEA

GO:0071560 "cellular response to transforming growth factor beta stimulus" evidence=IEA

UNIPROTKB|Q5F389 WWOX "WW domain-containing oxidoreductase" [Gallus gallus (taxid:9031)]

 Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
 Identities = 115/307 (37%), Positives = 177/307 (57%)

Query:    12 FSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVRE 71
             +  +STA E+ QG D +G   I+TGA+SGIG ETA+  AL G +VI+A RNM+ G D  +
Sbjct:   107 YDGNSTAMEILQGRDLSGKVIIITGANSGIGFETAKSFALHGAYVILACRNMSRGNDAVQ 166

Query:    72 AIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIE 131
              I++E   AKV+AM LD++SL SV+ FA  + S+  PL+IL+ NA I  S + L++D +E
Sbjct:   167 RILEEWHKAKVEAMTLDLASLRSVQNFAEAFKSKNMPLHILVCNAAIFGSSWCLTEDGLE 226

Query:   132 LQFATNXXXXXXXXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAY---SEG-IRFDKIN 187
               F  N            D +++     S   R+V VSSE+HRF     S G + F  ++
Sbjct:   227 STFQVNHLGHFYLVQLLEDILRR-----SSPARVVVVSSESHRFTEIKDSSGKLDFSLLS 281

Query:   188 -DESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRG 246
               +  Y +  AY +SKL NIL + EL + L   GV  T+NS+HPG+++ +    N  +  
Sbjct:   282 PSKKEYWAMLAYNRSKLCNILFSNELNRRLSPHGV--TSNSVHPGNMIYSSIHRNWWVYT 339

Query:   247 FCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMELAKKLWD 306
                T+ +   K++ QGAATT Y A   +++G+ G YF++     P+++ +N   A  LW+
Sbjct:   340 LLFTLARPFTKSMQQGAATTVYCATAAELEGLGGMYFNNCCRCLPSAEARNELTAVALWE 399

Query:   307 FSMNLVK 313
              S  L++
Sbjct:   400 LSERLIR 406

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

FB|FBgn0033204 CG2065 [Drosophila melanogaster (taxid:7227)]

 Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
 Identities = 118/291 (40%), Positives = 164/291 (56%)

Query:    20 EVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPS 79
             + T+  D TG   IVTGA++GIG ET   +A RG  V MA R+M   +  R+ I++E  +
Sbjct:     5 QFTKQTDETGKVFIVTGANTGIGKETVLEIAKRGGTVYMACRDMNRCEKARQDIIRETNN 64

Query:    80 AKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXX 139
               + + ELD+SSL S+RKFA+ +  +   L++LINNAG+M  P  L+KD  E+Q   N  
Sbjct:    65 QNIFSRELDLSSLESIRKFAAGFKKEQDKLHVLINNAGVMHCPRTLTKDGFEMQLGVNHM 124

Query:   140 XXXXXXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYG 199
                       D +KKTA       RIVNVSS  H   +   I+   +N E +Y+  GAY 
Sbjct:   125 GHFLLTHLLLDVLKKTAPS-----RIVNVSSLVHTQGF---IKTADLNSEKSYSRIGAYS 176

Query:   200 QSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR-YNGILRGFCNTVGK---LV 255
             QSKLAN+L  +ELAK L  +G  +T NSLHPG++ T L R +  +   F   + K    V
Sbjct:   177 QSKLANVLFTRELAKRL--EGTGVTTNSLHPGAVDTELSRNWKFLKHPFAQLLLKPLLWV 234

Query:   256 LKNIPQ-GAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMELAKKLW 305
             L   P+ GA TT Y AL P ++ VSG YFSD    + ++  Q+ +  K LW
Sbjct:   235 LFKTPRNGAQTTLYAALDPALKDVSGLYFSDCQPKEVSAAAQDDKTGKFLW 285

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6RVV4	TIC32_PEA	1, ., 1, ., 1, ., -	0.7834	1.0	0.9905	N/A	no
A2RVM0	TIC32_ARATH	1, ., 1, ., 1, ., -	0.7371	0.9936	0.9658	no	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00037682001 SubName- Full=Chromosome undetermined scaffold_91, whole genome shotgun sequence; (313 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	313
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	1e-110
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	2e-90
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	1e-85
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	4e-83
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	1e-72
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	8e-54
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	2e-48
PLN00015	308	PLN00015, PLN00015, protochlorophyllide reductase	1e-39
PRK07453	322	PRK07453, PRK07453, protochlorophyllide oxidoreduc	2e-39
cd05233	234	cd05233, SDR_c, classical (c) SDRs	2e-38
TIGR01289	314	TIGR01289, LPOR, light-dependent protochlorophylli	7e-38
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	2e-34
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	3e-34
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-28
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	1e-26
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	4e-26
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	1e-25
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	1e-25
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	1e-25
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	2e-24
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	1e-22
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-22
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-22
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	6e-22
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-22
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	2e-21
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	2e-21
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	2e-21
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	5e-21
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	2e-20
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	3e-20
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	3e-19
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	3e-19
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-19
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	6e-19
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	9e-19
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	9e-19
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	1e-18
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	2e-18
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	3e-18
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	3e-18
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	3e-18
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	1e-17
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	1e-17
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	1e-17
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	3e-17
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	6e-17
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	6e-17
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	7e-17
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	8e-17
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	1e-16
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	1e-16
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	3e-16
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	3e-16
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	3e-16
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	4e-16
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	7e-16
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	8e-16
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	8e-16
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	9e-16
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	1e-15
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	1e-15
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	1e-15
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	1e-15
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	1e-15
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	2e-15
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	2e-15
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	2e-15
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	4e-15
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	5e-15
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	6e-15
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	1e-14
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	1e-14
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	1e-14
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	2e-14
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	3e-14
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	4e-14
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	6e-14
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	6e-14
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	7e-14
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	8e-14
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-13
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	1e-13
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	1e-13
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	1e-13
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	1e-13
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	2e-13
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	2e-13
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	3e-13
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	3e-13
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	4e-13
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	4e-13
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	7e-13
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	7e-13
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-13
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	1e-12
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	1e-12
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	1e-12
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	2e-12
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	2e-12
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	3e-12
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	5e-12
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	5e-12
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	5e-12
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	6e-12
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	6e-12
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	7e-12
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	7e-12
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-12
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	7e-12
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	8e-12
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-11
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	1e-11
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	2e-11
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	2e-11
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	2e-11
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	3e-11
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-11
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	4e-11
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	6e-11
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	7e-11
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	8e-11
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	8e-11
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	8e-11
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	1e-10
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	1e-10
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	1e-10
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	1e-10
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	1e-10
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	1e-10
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	1e-10
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	2e-10
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	2e-10
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	2e-10
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	2e-10
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	3e-10
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	3e-10
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	4e-10
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	4e-10
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	7e-10
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	7e-10
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	9e-10
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	1e-09
TIGR01500	256	TIGR01500, sepiapter_red, sepiapterin reductase	1e-09
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	1e-09
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-09
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	1e-09
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	2e-09
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	2e-09
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	2e-09
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	2e-09
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	2e-09
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	4e-09
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	4e-09
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	5e-09
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	5e-09
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	6e-09
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	6e-09
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	8e-09
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	9e-09
PRK07023	243	PRK07023, PRK07023, short chain dehydrogenase; Pro	1e-08
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	1e-08
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	2e-08
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	2e-08
cd08928	248	cd08928, KR_fFAS_like_SDR_c_like, ketoacyl reducta	2e-08
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	2e-08
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	3e-08
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	3e-08
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	3e-08
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	3e-08
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	3e-08
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	3e-08
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	4e-08
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	4e-08
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	5e-08
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	5e-08
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	6e-08
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	7e-08
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	8e-08
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	9e-08
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	1e-07
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	1e-07
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	1e-07
pfam08659	181	pfam08659, KR, KR domain	1e-07
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	2e-07
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	2e-07
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	3e-07
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	4e-07
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	6e-07
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	6e-07
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	7e-07
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	8e-07
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	8e-07
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	1e-06
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	1e-06
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	1e-06
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	1e-06
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	1e-06
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	1e-06
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	1e-06
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	3e-06
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	3e-06
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	5e-06
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	6e-06
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	6e-06
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	8e-06
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	9e-06
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	9e-06
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	1e-05
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	2e-05
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	2e-05
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	3e-05
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-05
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	7e-05
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	7e-05
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-05
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	8e-05
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	9e-05
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	1e-04
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	1e-04
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	1e-04
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	1e-04
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	1e-04
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	3e-04
PLN02657	390	PLN02657, PLN02657, 3,8-divinyl protochlorophyllid	3e-04
PRK08177	225	PRK08177, PRK08177, short chain dehydrogenase; Pro	4e-04
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	7e-04
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	8e-04
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	0.001
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	0.001
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	0.001
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	0.001
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	0.002
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	0.003
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	0.003
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	0.003
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	0.003
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	0.004

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score =  320 bits (823), Expect = e-110
 Identities = 136/277 (49%), Positives = 177/277 (63%), Gaps = 8/277 (2%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G   ++TGA+SGIG ETAR LA RG HVI+A RN   G++    I KE  +AKV+ ++LD
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLD 60

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLL 148
           +SSLASVR+FA E+ ++   L+ILINNAGIMA P  L+KD  ELQFA N+LGHFLLT+LL
Sbjct: 61  LSSLASVRQFAEEFLARFPRLDILINNAGIMAPPRRLTKDGFELQFAVNYLGHFLLTNLL 120

Query: 149 LDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILH 208
           L  +K      S   RIVNVSS AHR           + +   Y+ + AYGQSKLANIL 
Sbjct: 121 LPVLKA-----SAPSRIVNVSSIAHRAG-PIDFNDLDLENNKEYSPYKAYGQSKLANILF 174

Query: 209 AKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGAATTCY 268
            +ELA+ L+  G  +T N+LHPG + T L R NG        +   + K+  QGA T  Y
Sbjct: 175 TRELARRLEGTG--VTVNALHPGVVRTELLRRNGSFFLLYKLLRPFLKKSPEQGAQTALY 232

Query: 269 VALHPQVQGVSGEYFSDSNIYKPNSQGQNMELAKKLW 305
            A  P+++GVSG+YFSD  I   +S+  + ELA+KLW
Sbjct: 233 AATSPELEGVSGKYFSDCKIKMSSSEALDEELAEKLW 269

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score =  270 bits (691), Expect = 2e-90
 Identities = 128/284 (45%), Positives = 185/284 (65%), Gaps = 14/284 (4%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G T I+TGA++GIG ETAR LA RG  VIMA R+MA  ++    I ++  + +V    LD
Sbjct: 1   GKTVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLD 60

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLL 148
           ++SL S+R FA+E+ ++   L++LINNAG+M  P+  ++D  E+QF  NHLGHFLLT+LL
Sbjct: 61  LASLKSIRAFAAEFLAEEDRLDVLINNAGVMRCPYSKTEDGFEMQFGVNHLGHFLLTNLL 120

Query: 149 LDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILH 208
           LD +KK+A       RIVNVSS AH+      I FD +N E +YN+  AY QSKLAN+L 
Sbjct: 121 LDLLKKSA-----PSRIVNVSSLAHKAGK---INFDDLNSEKSYNTGFAYCQSKLANVLF 172

Query: 209 AKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLV----LKNIPQGAA 264
            +ELA+ L+  G  +T N+LHPG + T L R+ GI   F +T+   +    +K   +GA 
Sbjct: 173 TRELARRLQ--GTGVTVNALHPGVVRTELGRHTGIHHLFLSTLLNPLFWPFVKTPREGAQ 230

Query: 265 TTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMELAKKLWDFS 308
           T+ Y+AL  +++GVSG+YFSD  + +P  +  + E A++LW+ S
Sbjct: 231 TSIYLALAEELEGVSGKYFSDCKLKEPAPEAMDEETARRLWEIS 274

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score =  259 bits (664), Expect = 1e-85
 Identities = 127/320 (39%), Positives = 166/320 (51%), Gaps = 33/320 (10%)

Query: 10  SGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDV 69
           SGF A+STAEEV  G D +G TAIVTG  SG+G ET R LA  G HVI+  R     ++ 
Sbjct: 7   SGFGAASTAEEVLAGHDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREA 66

Query: 70  REAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDN 129
              I        V+ + LD++ L SVR FA  +   GR ++ILINNAG+MA P     D 
Sbjct: 67  LAGI------DGVEVVMLDLADLESVRAFAERFLDSGRRIDILINNAGVMACPETRVGDG 120

Query: 130 IELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDE 189
            E QFATNHLGHF L +LL   +   A   +   R+V +SS  HR +    IR+D  +  
Sbjct: 121 WEAQFATNHLGHFALVNLLWPAL--AAGAGA---RVVALSSAGHRRS---PIRWDDPHFT 172

Query: 190 SAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY----NGILR 245
             Y+ + AYGQSK AN L A  L K  K+ GV   A S+HPG I+T L R+      +  
Sbjct: 173 RGYDKWLAYGQSKTANALFAVHLDKLGKDQGVR--AFSVHPGGILTPLQRHLPREEQVAL 230

Query: 246 GFCNTVGKLV---LKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNM---- 298
           G+ +  G  +    K   QGAAT  + A  PQ+ G+ G Y  D +I +P  +        
Sbjct: 231 GWVDEHGNPIDPGFKTPAQGAATQVWAATSPQLAGMGGLYCEDCDIAEPTPKDAPWSGVR 290

Query: 299 ------ELAKKLWDFSMNLV 312
                 E A +LW  S  L 
Sbjct: 291 PHAIDPEAAARLWALSAALT 310

Length = 315

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score =  252 bits (646), Expect = 4e-83
 Identities = 116/297 (39%), Positives = 153/297 (51%), Gaps = 21/297 (7%)

Query: 26  DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAM 85
           D +G  A+VTGA++G+G ETA  LA +G HV++AVRN+  GK     I    P A V   
Sbjct: 13  DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQ 72

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLT 145
           ELD++SLASVR  A    +    +++LINNAG+M +P   + D  ELQF TNHLGHF LT
Sbjct: 73  ELDLTSLASVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALT 132

Query: 146 HLLLDTMKKTAQKSSREG-RIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
            LLLD +          G R+V VSS  HR      I FD +  E  YN   AYGQSKLA
Sbjct: 133 GLLLDRLLPV------PGSRVVTVSSGGHRI--RAAIHFDDLQWERRYNRVAAYGQSKLA 184

Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY-NGILRGFCNTVGKLVLKNIPQGA 263
           N+L   EL + L   G    A + HPG   T L R     LR     +  L+ ++   GA
Sbjct: 185 NLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRALRPVATVLAPLLAQSPEMGA 244

Query: 264 ATTCYVALHPQVQGVSGEYFSDSNIY---------KPNSQGQNMELAKKLWDFSMNL 311
             T   A  P V+G  G+Y+                 ++Q  + +L ++LW  S  L
Sbjct: 245 LPTLRAATDPAVRG--GQYYGPDGFGEQRGYPKVVASSAQSHDEDLQRRLWAVSEEL 299

Length = 306

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score =  225 bits (575), Expect = 1e-72
 Identities = 112/290 (38%), Positives = 174/290 (60%), Gaps = 12/290 (4%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G   I+TGA+SGIG ETAR  AL G HVI+A RNM+        I++E   A+V+AM LD
Sbjct: 1   GKVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLD 60

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLL 148
           ++SL SV++FA  + ++  PL++L+ NA + A P+ L++D +E  F  NHLGHF L  LL
Sbjct: 61  LASLRSVQRFAEAFKAKNSPLHVLVCNAAVFALPWTLTEDGLETTFQVNHLGHFYLVQLL 120

Query: 149 LDTMKKTAQKSSREGRIVNVSSEAHRFA----YSEGIRFDKIN-DESAYNSFGAYGQSKL 203
            D ++++A       R++ VSSE+HRF         + F  ++  +  Y S  AY ++KL
Sbjct: 121 EDVLRRSAP-----ARVIVVSSESHRFTDLPDSCGNLDFSLLSPPKKKYWSMLAYNRAKL 175

Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGA 263
            NIL + EL + L   G  IT+NSLHPG+++ +    N  +     T+ +   K++ QGA
Sbjct: 176 CNILFSNELHRRLSPRG--ITSNSLHPGNMMYSSIHRNWWVYTLLFTLARPFTKSMQQGA 233

Query: 264 ATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMELAKKLWDFSMNLVK 313
           ATT Y A  P+++G+ G YF++     P+ + Q+   A++LW+ S  L++
Sbjct: 234 ATTVYCATAPELEGLGGMYFNNCFRCLPSPEAQSEATAQQLWELSERLIQ 283

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score =  177 bits (452), Expect = 8e-54
 Identities = 92/213 (43%), Positives = 119/213 (55%), Gaps = 10/213 (4%)

Query: 26  DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAM 85
           D +G  A+VTGAS G+G   AR LA  G  VI+ VRN A G+    AI   +P AK+   
Sbjct: 11  DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLR 70

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASP-FMLSKDNIELQFATNHLGHFLL 144
            LD+SSLASV     +  ++GRP+++LINNAG+M  P    + D  ELQF TNHLGHF L
Sbjct: 71  ALDLSSLASVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFAL 130

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
           T  LL  ++          R+ + SS A   A    I +D +N E +Y    AY QSK+A
Sbjct: 131 TAHLLPLLRAGR------ARVTSQSSIA---ARRGAINWDDLNWERSYAGMRAYSQSKIA 181

Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
             L A EL +  +  G  IT+N  HPG   TNL
Sbjct: 182 VGLFALELDRRSRAAGWGITSNLAHPGVAPTNL 214

Length = 313

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score =  163 bits (415), Expect = 2e-48
 Identities = 102/317 (32%), Positives = 146/317 (46%), Gaps = 45/317 (14%)

Query: 31  TAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDV 89
           T ++TGASSG+G   A+ LA RG  HV+MA R+    +   + +   +P      +  D+
Sbjct: 3   TVVITGASSGLGLAAAKALARRGEWHVVMACRDFLKAEQAAQEVG--MPKDSYSVLHCDL 60

Query: 90  SSLASVRKFASEYNSQGRPLNILINNAGI---MASPFMLSKDNIELQFATNHLGHFLLTH 146
           +SL SVR+F   +   GRPL+ L+ NA +    A     + D  EL    NHLGHFLLT+
Sbjct: 61  ASLDSVRQFVDNFRRTGRPLDALVCNAAVYLPTAKEPRFTADGFELTVGVNHLGHFLLTN 120

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI------------------RFDKIND 188
           LLL+ ++++   S    RIV V S  H      G                    F+ + D
Sbjct: 121 LLLEDLQRSENASP---RIVIVGSITHNPNTLAGNVPPRATLGDLEGLAGGLKGFNSMID 177

Query: 189 ESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIV-TNLFRYNGILRGF 247
              +    AY  SK+ N+L   EL + L E    IT NSL+PG I  T LFR +  L   
Sbjct: 178 GGEFEGAKAYKDSKVCNMLTTYELHRRLHE-ETGITFNSLYPGCIAETGLFREHYPLF-- 234

Query: 248 CNTVGKLVLKNIPQGAATT-------CYVALHPQVQGVSGEYFSDSN-----IYKPNSQG 295
             T+     K I +G  +          V   P + GVSG Y+S          + + + 
Sbjct: 235 -RTLFPPFQKYITKGYVSEEEAGERLAAVIADPSL-GVSGVYWSWGKASGSFENQSSQES 292

Query: 296 QNMELAKKLWDFSMNLV 312
            + E A+KLW+ S  LV
Sbjct: 293 SDDEKARKLWEISEKLV 309

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|177654 PLN00015, PLN00015, protochlorophyllide reductase

 Score =  140 bits (355), Expect = 1e-39
 Identities = 103/319 (32%), Positives = 146/319 (45%), Gaps = 51/319 (15%)

Query: 33  IVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSS 91
           I+TGASSG+G  TA+ LA  G  HV+MA R+    +  R A    +P      M LD++S
Sbjct: 1   IITGASSGLGLATAKALAETGKWHVVMACRDFLKAE--RAAKSAGMPKDSYTVMHLDLAS 58

Query: 92  LASVRKFASEYNSQGRPLNILINNAGI---MASPFMLSKDNIELQFATNHLGHFLLTHLL 148
           L SVR+F   +   GRPL++L+ NA +    A     + D  EL   TNHLGHFLL+ LL
Sbjct: 59  LDSVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLL 118

Query: 149 LDTMKKTAQKSSR---EGRIV--------NVSSEAHRFAYS------EGIRFDKINDESA 191
           LD +KK+   S R    G I         NV  +A+            G+    + D   
Sbjct: 119 LDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGLNSSAMIDGGE 178

Query: 192 YNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIV-TNLFRYNGILRGFCNT 250
           ++   AY  SK+ N+L  +E  +   E+   IT  SL+PG I  T LFR +         
Sbjct: 179 FDGAKAYKDSKVCNMLTMQEFHRRYHEE-TGITFASLYPGCIATTGLFREH---IPLFRL 234

Query: 251 VGKLVLKNIPQGAATTCYVALH------------PQVQGVSGEYFS-----DSNIYKPNS 293
           +     K I +G     YV+              P +   SG Y+S      S   + + 
Sbjct: 235 LFPPFQKYITKG-----YVSEEEAGKRLAQVVSDPSL-TKSGVYWSWNGGSASFENQLSQ 288

Query: 294 QGQNMELAKKLWDFSMNLV 312
           +  + E AKK+W+ S  LV
Sbjct: 289 EASDAEKAKKVWEISEKLV 307

Length = 308

>gnl|CDD|180983 PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated

 Score =  140 bits (356), Expect = 2e-39
 Identities = 103/324 (31%), Positives = 149/324 (45%), Gaps = 54/324 (16%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
           T I+TGASSG+G   A+ LA RG HVIMA RN+   K    A    IP      + +D+ 
Sbjct: 8   TVIITGASSGVGLYAAKALAKRGWHVIMACRNLK--KAEAAAQELGIPPDSYTIIHIDLG 65

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGI----MASPFMLSKDNIELQFATNHLGHFLLTH 146
            L SVR+F  ++ + G+PL+ L+ NA +    +  P + S    EL  ATNHLGHFLL +
Sbjct: 66  DLDSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEP-LRSPQGYELSMATNHLGHFLLCN 124

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEAHRF-------------------AYSEGIRFDKIN 187
           LLL+ +KK+    + + R+V + +                         +  G +   I+
Sbjct: 125 LLLEDLKKS---PAPDPRLVILGTVTANPKELGGKIPIPAPADLGDLSGFEAGFK-APIS 180

Query: 188 --DESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIV-TNLFRYNGIL 244
             D   +    AY  SKL N+L  +EL +   E    IT +SL+PG +  T LFR    L
Sbjct: 181 MADGKKFKPGKAYKDSKLCNMLTMRELHRRYHES-TGITFSSLYPGCVADTPLFRNTPPL 239

Query: 245 RGFCNTVGKLVLKNIPQGAAT-------TCYVALHPQVQGVSGEYFSDSNIYKPNSQGQN 297
             F   +     KNI  G  +          V   P+    SG ++S  N  K + +  +
Sbjct: 240 --F-QKLFPWFQKNITGGYVSQELAGERVAQVVADPEF-AQSGVHWSWGNRQKKDRKAFS 295

Query: 298 MEL---------AKKLWDFSMNLV 312
            EL         A++LWD S  LV
Sbjct: 296 QELSDRATDDDKARRLWDLSAKLV 319

Length = 322

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  135 bits (341), Expect = 2e-38
 Identities = 77/237 (32%), Positives = 98/237 (41%), Gaps = 32/237 (13%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSS 91
           A+VTGASSGIG   AR LA  G  V++A RN  A     E    E       A++ DVS 
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALA---ELAAIEALGGNAVAVQADVSD 57

Query: 92  LASVRKFASEYNSQGRPLNILINNAGIMASPFM--LSKDNIELQFATNHLGHFLLTHLLL 149
              V     E   +   L+IL+NNAGI     +  L+ ++ +     N  G FLLT   L
Sbjct: 58  EEDVEALVEEALEEFGRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFLLTRAAL 117

Query: 150 DTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHA 209
             MKK        GRIVN+SS A       G+R              AY  SK A     
Sbjct: 118 PHMKK-----QGGGRIVNISSVA-------GLR--------PLPGQAAYAASKAALEGLT 157

Query: 210 KELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGAATT 266
           + LA  L   G  I  N++ PG + T +    G          K +   IP G   T
Sbjct: 158 RSLALELAPYG--IRVNAVAPGLVDTPMLAKLGPEEAE-----KELAAAIPLGRLGT 207

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|200089 TIGR01289, LPOR, light-dependent protochlorophyllide reductase

 Score =  136 bits (344), Expect = 7e-38
 Identities = 99/316 (31%), Positives = 144/316 (45%), Gaps = 43/316 (13%)

Query: 31  TAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEI--PSAKVDAMEL 87
           T I+TGASSG+G   A+ LA  G  HVIMA R+        E   K +  P      M L
Sbjct: 5   TVIITGASSGLGLYAAKALAATGEWHVIMACRDF----LKAEQAAKSLGMPKDSYTIMHL 60

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGI---MASPFMLSKDNIELQFATNHLGHFLL 144
           D+ SL SVR+F  ++   GRPL+ L+ NA +    A     + D  EL   TNHLGHFLL
Sbjct: 61  DLGSLDSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLL 120

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIN---------------DE 189
            +LLLD +K +  K  R   + +++   +  A +   + +  +               D 
Sbjct: 121 CNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANLGDLSGLAAGFKAPIAMIDG 180

Query: 190 SAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIV-TNLFRYNGILRGFC 248
             +    AY  SK+ N+L  +EL +    D   IT  SL+PG I  T LFR +  L    
Sbjct: 181 KEFKGAKAYKDSKVCNMLTVRELHRRF-HDETGITFASLYPGCIADTGLFREHVPL---F 236

Query: 249 NTVGKLVLKNIPQGAAT-------TCYVALHPQVQGVSGEYFSDSN-----IYKPNSQGQ 296
            T+     K I +G  +          V   P+++  SG Y+S  N     + + + +  
Sbjct: 237 RTLFPPFQKYITKGYVSEEEAGERLAQVVSDPKLKK-SGVYWSWGNRQESFVNQLSEEVS 295

Query: 297 NMELAKKLWDFSMNLV 312
           +   A K+WD S  LV
Sbjct: 296 DDSKASKMWDLSEKLV 311

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 314

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score =  124 bits (314), Expect = 2e-34
 Identities = 81/263 (30%), Positives = 110/263 (41%), Gaps = 45/263 (17%)

Query: 31  TAIVTGASSGIGTETARVLALRG-VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDV 89
            A+VTGA+ GIG E  R LA  G   VI+  R++  G+   E +  E     V   +LDV
Sbjct: 2   VALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAE--GLSVRFHQLDV 59

Query: 90  SSLASVRKFASEYNSQGRPLNILINNAGI---MASPFMLSKDNIELQFATNHLGHFLLTH 146
           +  AS+   A     +   L+IL+NNAGI          +++       TN  G   +T 
Sbjct: 60  TDDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTPTREQARETMKTNFFGTVDVTQ 119

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI 206
            LL  +KK     S  GRIVNVSS         G         SAY        SK A  
Sbjct: 120 ALLPLLKK-----SPAGRIVNVSS-------GLGSL------TSAYGV------SKAALN 155

Query: 207 LHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGAATT 266
              + LAK LKE    I  N+  PG + T++                   K   +GA T 
Sbjct: 156 ALTRILAKELKET--GIKVNACCPGWVKTDMGGGKA-------------PKTPEEGAETP 200

Query: 267 CYVALHPQVQGVSGEYFSDSNIY 289
            Y+AL P     +G++FSD  + 
Sbjct: 201 VYLALLPPDGEPTGKFFSDKKVV 223

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  124 bits (314), Expect = 3e-34
 Identities = 68/214 (31%), Positives = 91/214 (42%), Gaps = 30/214 (14%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGK-DVREAIVKEIPSAKVDAMELDV 89
            A+VTGASSGIG   AR LA  G  V++A R       +   A +KE    +  A+  DV
Sbjct: 7   VALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADV 66

Query: 90  SS-LASVRKFASEYNSQGRPLNILINNAGIM---ASPFMLSKDNIELQFATNHLGHFLLT 145
           S    SV    +    +   ++IL+NNAGI    A    L++++ +     N LG FLLT
Sbjct: 67  SDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLT 126

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
              L           ++ RIVN+SS A                        AY  SK A 
Sbjct: 127 RAAL--------PLMKKQRIVNISSVAGLGGPP---------------GQAAYAASKAAL 163

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
           I   K LA  L   G  I  N++ PG I T +  
Sbjct: 164 IGLTKALALELAPRG--IRVNAVAPGYIDTPMTA 195

Length = 251

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  107 bits (271), Expect = 8e-28
 Identities = 74/240 (30%), Positives = 102/240 (42%), Gaps = 38/240 (15%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAM 85
            G TA+VTGAS GIG   A  LA  G  V++   N  A     EA+  E+ +A  +   +
Sbjct: 4   QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAA----EALAAELRAAGGEARVL 59

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGI--MASPFM-LSKDNIELQFATNHLGHF 142
             DVS  A+VR            L+IL+NNAGI   A     +S+++ +     N  G F
Sbjct: 60  VFDVSDEAAVRALIEAAVEAFGALDILVNNAGITRDA-LLPRMSEEDWDRVIDVNLTGTF 118

Query: 143 LLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSK 202
            +    L  M K     +R GRIVN+SS               ++  +       Y  +K
Sbjct: 119 NVVRAALPPMIK-----ARYGRIVNISS---------------VSGVTGNPGQTNYSAAK 158

Query: 203 LANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQG 262
              I   K LA  L   G  IT N++ PG I T+      +  G    V   +LK IP G
Sbjct: 159 AGVIGFTKALALELASRG--ITVNAVAPGFIDTD------MTEGLPEEVKAEILKEIPLG 210

Length = 246

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  104 bits (263), Expect = 1e-26
 Identities = 61/210 (29%), Positives = 84/210 (40%), Gaps = 25/210 (11%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G  A+VTGA+ GIG   A  LA  G  VI+            E +      A+  A ++
Sbjct: 5   EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKAR--ARQV 62

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGI--MASPFMLSKDNIELQFATNHLGHFLLT 145
           DV   A+++   +        L+IL+ NAGI  +     +  +  E     N  G FLLT
Sbjct: 63  DVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLT 122

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
              L  + +     +  GRIV  SS A       G R         Y     Y  SK   
Sbjct: 123 QAALPALIR-----AGGGRIVLTSSVA-------GPRV-------GYPGLAHYAASKAGL 163

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVT 235
           +   + LA  L     NIT NS+HPG + T
Sbjct: 164 VGFTRALALELAAR--NITVNSVHPGGVDT 191

Length = 251

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score =  103 bits (259), Expect = 4e-26
 Identities = 65/215 (30%), Positives = 96/215 (44%), Gaps = 32/215 (14%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G  A++TGASSGIG  TAR LA  G  V++A R     ++  EA+  EI +    A+ L
Sbjct: 5   KGKVALITGASSGIGEATARALAEAGAKVVLAARR----EERLEALADEIGAGAALALAL 60

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFM--LSKDNIELQFATNHLGHFLLT 145
           DV+  A+V         +   ++IL+NNAG+     +     D+ +    TN  G    T
Sbjct: 61  DVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGT 120

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
             +L  M    +KS   G I+N+ S A R+ Y  G                 YG +K A 
Sbjct: 121 RAVLPGMV--ERKS---GHIINLGSIAGRYPYPGG---------------AVYGATKAA- 159

Query: 206 ILHA--KELAKHLKEDGVNITANSLHPGSIVTNLF 238
            + A    L + L   G+ +T   + PG + T  F
Sbjct: 160 -VRAFSLGLRQELAGTGIRVT--VISPGLVETTEF 191

Length = 246

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score =  101 bits (255), Expect = 1e-25
 Identities = 73/215 (33%), Positives = 99/215 (46%), Gaps = 36/215 (16%)

Query: 32  AIVTGASSGIGTETARVLALRG-VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
            ++TGAS GIG E  R L  RG   VI   R+ +A  ++          +++  +ELDV+
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAALGASH---SRLHILELDVT 57

Query: 91  SL--ASVRKFASEYNSQGRPLNILINNAGIMASPFMLS---KDNIELQFATNHLGHFLLT 145
                S    A      G  L++LINNAGI+ S    S    +++   F  N LG  LLT
Sbjct: 58  DEIAESAEAVAERLGDAG--LDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGPLLLT 115

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFG--AYGQSKL 203
              L  + K A+       I+N+SS           R   I D     S G  +Y  SK 
Sbjct: 116 QAFLPLLLKGARAK-----IINISS-----------RVGSIGDN---TSGGWYSYRASKA 156

Query: 204 A-NILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
           A N+L  K LA  LK DG  IT  SLHPG + T++
Sbjct: 157 ALNML-TKSLAVELKRDG--ITVVSLHPGWVRTDM 188

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score =  102 bits (257), Expect = 1e-25
 Identities = 63/211 (29%), Positives = 97/211 (45%), Gaps = 27/211 (12%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
           TA++TGASSGIG E A+ LA RG ++I+  R     + + + +  +    +V+ +  D+S
Sbjct: 8   TALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT-GVEVEVIPADLS 66

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGIM-ASPFM-LSKDNIELQFATNHLGHFLLTHLL 148
              ++ +   E   +G P+++L+NNAG     PF+ LS D  E     N L    LT  +
Sbjct: 67  DPEALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAV 126

Query: 149 LDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILH 208
           L  M +        G I+N+ S A                   Y +   Y  +K A +L 
Sbjct: 127 LPGMVE-----RGAGHIINIGSAA---GLIPT----------PYMA--VYSATK-AFVLS 165

Query: 209 AKE-LAKHLKEDGVNITANSLHPGSIVTNLF 238
             E L + LK  GV +TA  + PG   T  F
Sbjct: 166 FSEALREELKGTGVKVTA--VCPGPTRTEFF 194

Length = 265

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  101 bits (255), Expect = 1e-25
 Identities = 58/217 (26%), Positives = 83/217 (38%), Gaps = 33/217 (15%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
             ++TG SSGIG   A  LA +G  VI   RN      +         + +V  +ELDV+
Sbjct: 2   VVLITGCSSGIGLALALALAAQGYRVIATARN---PDKLESLGELLNDNLEV--LELDVT 56

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGIMAS-PFM-LSKDNIELQFATNHLGHFLLTHLL 148
              S++    E   +   +++L+NNAG     P    S + +   F  N  G   +T   
Sbjct: 57  DEESIKAAVKEVIERFGRIDVLVNNAGYGLFGPLEETSIEEVRELFEVNVFGPLRVTRAF 116

Query: 149 LDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILH 208
           L  M+K        GRIVNVSS A                   Y +      SK A  L 
Sbjct: 117 LPLMRK-----QGSGRIVNVSSVAGLVPTPFL---------GPYCA------SKAA--LE 154

Query: 209 A--KELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI 243
           A  + L   L   G+ +T   + PG + T        
Sbjct: 155 ALSESLRLELAPFGIKVT--IIEPGPVRTGFADNAAG 189

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 98.8 bits (246), Expect = 2e-24
 Identities = 77/267 (28%), Positives = 130/267 (48%), Gaps = 20/267 (7%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G + ++TGA+SGIG   A  +A RG  V M  RN    ++ R+ I  E  +  +    +D
Sbjct: 1   GRSFLITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGNQNIFLHIVD 60

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLL 148
           +S    V +F  E+  +G+ L++LINNAG M +   L++D +E  FATN LG ++LT  L
Sbjct: 61  MSDPKQVWEFVEEFKEEGKKLHVLINNAGCMVNKRELTEDGLEKNFATNTLGTYILTTHL 120

Query: 149 LDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDE-SAYNSFGAYGQSKLANIL 207
           +  ++K       + R++ VSS        + +  + +  E +A++    Y Q+K   ++
Sbjct: 121 IPVLEK-----EEDPRVITVSSGG---MLVQKLNTNNLQSERTAFDGTMVYAQNKRQQVI 172

Query: 208 HAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGAATTC 267
             ++ AK        I  + +HPG   T   R +  +  F        L++  QGA T  
Sbjct: 173 MTEQWAKKHP----EIHFSVMHPGWADTPAVRNS--MPDFHARFKDR-LRSEEQGADTVV 225

Query: 268 YVAL-HPQVQGVSGEYFSDSNIYKPNS 293
           ++AL     +  SG ++ D    KP S
Sbjct: 226 WLALSSAAAKAPSGRFYQDR---KPVS 249

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 94.6 bits (236), Expect = 1e-22
 Identities = 63/213 (29%), Positives = 90/213 (42%), Gaps = 37/213 (17%)

Query: 33  IVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSL 92
           I+TGASSGIG E A  LA  G  ++++ R     ++V+     E+ +     + LD+S L
Sbjct: 7   IITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSEC-LELGAPSPHVVPLDMSDL 65

Query: 93  ASVRKFASEYNSQGRPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGHFLLTHLLLD 150
               +   E       L+ILINNAGI M S F   S D        N+ G   LT   L 
Sbjct: 66  EDAEQVVEEALKLFGGLDILINNAGISMRSLFHDTSIDVDRKIMEVNYFGPVALTKAALP 125

Query: 151 TMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHA- 209
            + +       +G IV VSS A +                 + +  AY  SK A  L   
Sbjct: 126 HLIE-----RSQGSIVVVSSIAGKIGV-------------PFRT--AYAASKHA--LQGF 163

Query: 210 -----KELAKHLKEDGVNITANSLHPGSIVTNL 237
                 EL+    E  +++T   + PG I TN+
Sbjct: 164 FDSLRAELS----EPNISVT--VVCPGLIDTNI 190

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 94.1 bits (235), Expect = 1e-22
 Identities = 65/213 (30%), Positives = 90/213 (42%), Gaps = 28/213 (13%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G  AIVTGASSGIG   AR  A  G  V++  RN  A + V   I+      +  A+  
Sbjct: 4   EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAG---GRAIAVAA 60

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGI--MASPFM-LSKDNIELQFATNHLGHFLL 144
           DVS  A V    +    +   ++IL+NNAG      P + + +   +  FA N    +L 
Sbjct: 61  DVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLW 120

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
           T   +  M+         G IVNV+S A       G+R             G Y  SK A
Sbjct: 121 TQAAVPAMRGEGG-----GAIVNVASTA-------GLRPRP--------GLGWYNASKGA 160

Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
            I   K LA  L  D + +  N++ P  + T L
Sbjct: 161 VITLTKALAAELGPDKIRV--NAVAPVVVETGL 191

Length = 251

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 93.4 bits (233), Expect = 2e-22
 Identities = 60/216 (27%), Positives = 92/216 (42%), Gaps = 43/216 (19%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAMELD 88
            A+VTGA+ G+G   A  LA  G  V++  R+        E +V+ + +   +  A++ D
Sbjct: 8   VALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAA---EELVEAVEALGRRAQAVQAD 64

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIM-ASPFM-LSKDNIELQFATNHLGHFLLTH 146
           V+  A++    +    +   ++IL+NNAGI    P   +S D  +     N  G F L  
Sbjct: 65  VTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLR 124

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFG--AYGQSK-- 202
            ++  M+K      R GRIVN+SS A                       G   Y  +K  
Sbjct: 125 AVVPPMRKQ-----RGGRIVNISSVA-----------------GLPGWPGRSNYAAAKAG 162

Query: 203 ---LANILHAKELAKHLKEDGVNITANSLHPGSIVT 235
              L   L A+ELA++       IT N + PG I T
Sbjct: 163 LVGLTKAL-ARELAEY------GITVNMVAPGDIDT 191

Length = 249

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 92.0 bits (229), Expect = 6e-22
 Identities = 65/216 (30%), Positives = 97/216 (44%), Gaps = 31/216 (14%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAM-- 85
            G  A+VTGAS GIG   A+ LA  G  V++   N A+ K   E +V EI +A   A+  
Sbjct: 2   AGKVALVTGASRGIGRAIAKRLARDGASVVV---NYASSKAAAEEVVAEIEAAGGKAIAV 58

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIEL--QFATNHLGHFL 143
           + DVS  + V +           ++IL+NNAG+M    +      E    F  N  G F 
Sbjct: 59  QADVSDPSQVARLFDAAEKAFGGVDILVNNAGVMLKKPIAETSEEEFDRMFTVNTKGAFF 118

Query: 144 LTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKL 203
                   +++ A++    GRI+N+SS                   +   ++GAY  SK 
Sbjct: 119 -------VLQEAAKRLRDGGRIINISSSLTA---------------AYTPNYGAYAGSKA 156

Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
           A     + LAK L   G  IT N++ PG + T++F 
Sbjct: 157 AVEAFTRVLAKELGGRG--ITVNAVAPGPVDTDMFY 190

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 91.8 bits (229), Expect = 7e-22
 Identities = 67/218 (30%), Positives = 91/218 (41%), Gaps = 41/218 (18%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAV-RNMAAGKDVREAIVKEIPSAKVDAM-- 85
           G  AIVTGAS GIG   A +LA  G  V++A   N  A     + +++EI     DA+  
Sbjct: 5   GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAA----QELLEEIKEEGGDAIAV 60

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGIMAS-PFM-LSKDNIELQFATNHLGHFL 143
           + DVSS   V     +   +   ++IL+NNAGI        ++ +  +     N  G  L
Sbjct: 61  KADVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVML 120

Query: 144 LTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGA-----Y 198
           LT   L  M K      + G IVN+S                    S +   GA     Y
Sbjct: 121 LTRYALPYMIKR-----KSGVIVNIS--------------------SIWGLIGASCEVLY 155

Query: 199 GQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTN 236
             SK A     K LAK L   G  I  N++ PG+I T 
Sbjct: 156 SASKGAVNAFTKALAKELAPSG--IRVNAVAPGAIDTE 191

Length = 247

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 91.6 bits (228), Expect = 2e-21
 Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 8/149 (5%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
            AIVTGASSG G  T   LA +G  VI  +RN    +++     +      +   +LDV+
Sbjct: 5   IAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVT 64

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGIMASPFM--LSKDNIELQFATNHLGHFLLTHLL 148
              S+  F       GR +++L+NNAG     F+  +  +    QF TN  G   +T  +
Sbjct: 65  DQNSIHNFQLVLKEIGR-IDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAV 123

Query: 149 LDTMKKTAQKSSREGRIVNVSSEAHRFAY 177
           L  M+K      + G+I+N+SS + R  +
Sbjct: 124 LPYMRKQ-----KSGKIINISSISGRVGF 147

Length = 280

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 88.4 bits (220), Expect = 2e-21
 Identities = 36/147 (24%), Positives = 60/147 (40%), Gaps = 16/147 (10%)

Query: 31  TAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPS--AKVDAMEL 87
           T ++TG + G+G   AR LA  G  H+++  R   A       +V E+ +  A+V     
Sbjct: 2   TVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGA--AELVAELEALGAEVTVAAC 59

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGI--MASPFMLSKDNIELQFATNHLGHFLLT 145
           DV+   ++    +   +   PL+ +++NAG+        L+ +  E   A    G + L 
Sbjct: 60  DVADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEELTPERFERVLAPKVTGAWNLH 119

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEA 172
            L  D            G  V  SS A
Sbjct: 120 ELTRDL---------DLGAFVLFSSVA 137

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 90.4 bits (225), Expect = 2e-21
 Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 38/222 (17%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA---KVDAMEL 87
           T ++TGASSGIG  TAR  A  G  +I+  R      +  + +  E+ +    KV  ++L
Sbjct: 2   TVLITGASSGIGEATARRFAKAGAKLILTGRR----AERLQELADELGAKFPVKVLPLQL 57

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGI---MASPFMLSKDNIELQFATNHLGHFLL 144
           DVS   S+         + R ++IL+NNAG+   +        ++ E    TN  G   +
Sbjct: 58  DVSDRESIEAALENLPEEFRDIDILVNNAGLALGLDPAQEADLEDWETMIDTNVKGLLNV 117

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
           T L+L  M    Q     G I+N+ S A R+ Y+ G                 Y  +K A
Sbjct: 118 TRLILPIMIARNQ-----GHIINLGSIAGRYPYAGG---------------NVYCATKAA 157

Query: 205 NILHAKELAKHLKED--GVNITANSLHPGSIVT--NLFRYNG 242
                ++ + +L++D  G  I   ++ PG + T  +L R++G
Sbjct: 158 ----VRQFSLNLRKDLIGTGIRVTNIEPGLVETEFSLVRFHG 195

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 89.5 bits (223), Expect = 5e-21
 Identities = 71/244 (29%), Positives = 97/244 (39%), Gaps = 52/244 (21%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
            A+VTGAS GIG   A  LA  G  V +  R+  A  +  E I          A+E DVS
Sbjct: 2   VALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKA--LGGNAAALEADVS 59

Query: 91  SLASVRK-FASEYNSQGRPLNILINNAGIMASPFML--SKDNIELQFATNHLGHFLLTHL 147
              +V           G   +IL+NNAGI     ++  S+++ +     N  G F +T  
Sbjct: 60  DREAVEALVEKVEAEFGPV-DILVNNAGITRDNLLMRMSEEDWDAVINVNLTGVFNVTQA 118

Query: 148 LLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQ-----SK 202
           ++  M K      R GRI+N+SS         G+              G  GQ     SK
Sbjct: 119 VIRAMIK-----RRSGRIINISSVV-------GLI-------------GNPGQANYAASK 153

Query: 203 LANI-LH---AKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKN 258
              I      AKELA         IT N++ PG I T+      +       V + +LK 
Sbjct: 154 AGVIGFTKSLAKELASR------GITVNAVAPGFIDTD------MTDALPEKVKEKILKQ 201

Query: 259 IPQG 262
           IP G
Sbjct: 202 IPLG 205

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 87.9 bits (218), Expect = 2e-20
 Identities = 77/276 (27%), Positives = 122/276 (44%), Gaps = 42/276 (15%)

Query: 34  VTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLA 93
           +TG+S G+G   AR L  +G  V++  R+     D +       P A    +  D+SSLA
Sbjct: 12  ITGSSDGLGLAAARTLLHQGHEVVLHARSQKRAADAK----AACPGAAG-VLIGDLSSLA 66

Query: 94  SVRKFASEYNSQGRPLNILINNAGIMASPFMLSKD-NIELQFATNHLGHFLLTHLLLDTM 152
             RK A + N+ GR  + +I+NAGI++ P   + D  I    A N L  ++LT L+    
Sbjct: 67  ETRKLADQVNAIGR-FDAVIHNAGILSGPNRKTPDTGIPAMVAVNVLAPYVLTALI---- 121

Query: 153 KKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIN-DESAYNSFGAYGQSKLANILHAKE 211
                   R  R++ +SS  HR   +     D I+      N   AY  SKL  +  A  
Sbjct: 122 -------RRPKRLIYLSSGMHRGGNA---SLDDIDWFNRGENDSPAYSDSKLHVLTLAAA 171

Query: 212 LAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGAATTCYVAL 271
           +A+  K    ++++N++HPG + T +        G       L      QG  T  ++A 
Sbjct: 172 VARRWK----DVSSNAVHPGWVPTKM--------GGAGAPDDL-----EQGHLTQVWLAE 214

Query: 272 --HPQVQGVSGEYFSDSNIYKPNSQGQNMELAKKLW 305
              PQ    SG YF    + +P+   ++  L +KL 
Sbjct: 215 SDDPQAL-TSGGYFYHRRLQEPHPASEDSRLQEKLV 249

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 87.0 bits (216), Expect = 3e-20
 Identities = 50/148 (33%), Positives = 66/148 (44%), Gaps = 17/148 (11%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
           TG T ++TG +SGIG   AR     G  VI+  R     ++      KE+P+     + L
Sbjct: 4   TGNTVLITGGTSGIGLALARKFLEAGNTVIITGRR----EERLAEAKKELPNIH--TIVL 57

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSK-----DNIELQFATNHLGHF 142
           DV    SV   A    S+   L+ILINNAGI   P  L       D  + +  TN +G  
Sbjct: 58  DVGDAESVEALAEALLSEYPNLDILINNAGIQ-RPIDLRDPASDLDKADTEIDTNLIGPI 116

Query: 143 LLTHLLLDTMKKTAQKSSREGRIVNVSS 170
            L    L  +KK  +       IVNVSS
Sbjct: 117 RLIKAFLPHLKKQPE-----ATIVNVSS 139

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 85.2 bits (211), Expect = 3e-19
 Identities = 63/218 (28%), Positives = 106/218 (48%), Gaps = 24/218 (11%)

Query: 25  IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDA 84
           I+  G  A+VTGASSG+G   A+VLA  G  V++A R +   K++R  I  E  +A V  
Sbjct: 5   INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHV-- 62

Query: 85  MELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFML--SKDNIELQFATNHLGHF 142
           + LDV+   S++   +   ++   ++IL+NN+G+  +  ++  +  + +  F TN  G F
Sbjct: 63  VSLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAF 122

Query: 143 LLTHLLLDTM---KKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYG 199
            +   +   M    K A  +   GRI+N++S A       G+R             G Y 
Sbjct: 123 FVAQEVAKRMIARAKGAGNTKPGGRIINIASVA-------GLR--------VLPQIGLYC 167

Query: 200 QSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
            SK A +   + +A      G+N+  N++ PG I T +
Sbjct: 168 MSKAAVVHMTRAMALEWGRHGINV--NAICPGYIDTEI 203

Length = 258

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 85.5 bits (212), Expect = 3e-19
 Identities = 67/267 (25%), Positives = 105/267 (39%), Gaps = 58/267 (21%)

Query: 32  AIVTGASSGIGTETA-RVLAL----RGVHVIMAVRNMAAGKDVREAIVKEIPSAKV--DA 84
            +VTGA+SG+G     R+LA       + +I+A RN+   +    A++   P A+V  D 
Sbjct: 4   VLVTGANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRALLASHPDARVVFDY 63

Query: 85  MELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPF--------------------- 123
           + +D+S++ SV   A E   +   L+ L  NAGIM +P                      
Sbjct: 64  VLVDLSNMVSVFAAAKELKKRYPRLDYLYLNAGIMPNPGIDWIGAIKEVLTNPLFAVTNP 123

Query: 124 --------MLSK------DNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVS 169
                   +LS+      D +   F TN  GH+ L   L   + ++        +I+  S
Sbjct: 124 TYKIQAEGLLSQGDKATEDGLGEVFQTNVFGHYYLIRELEPLLCRSDGG----SQIIWTS 179

Query: 170 S-EAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSL 228
           S  A    +S       + D         Y  SK    L +  L +   + GV   +  +
Sbjct: 180 SLNASPKYFS-------LEDIQHLKGPAPYSSSKYLVDLLSLALNRKFNKLGVY--SYVV 230

Query: 229 HPGSIVTNLFRYNGILRGFCNTVGKLV 255
           HPG   TNL    GIL  F  T+   +
Sbjct: 231 HPGICTTNLT--YGILPPFTWTLALPL 255

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 84.5 bits (210), Expect = 3e-19
 Identities = 69/219 (31%), Positives = 100/219 (45%), Gaps = 33/219 (15%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAM 85
            G  A+VTGAS GIG   A  LA +G +V++   +  AG    EA+V EI +   K  A+
Sbjct: 4   EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGA---EALVAEIGALGGKALAV 60

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLGHFL 143
           + DVS   SV +   E  ++   ++IL+NNAGI   +  M + +++ +    TN  G F 
Sbjct: 61  QGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFN 120

Query: 144 LTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFG--AYGQS 201
           LT  +   M K      R GRI+N+SS                       + G   Y  S
Sbjct: 121 LTKAVARPMMK-----QRSGRIINISSVVGL-----------------MGNPGQANYAAS 158

Query: 202 KLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY 240
           K   I   K LA+ L      IT N++ PG I T++   
Sbjct: 159 KAGVIGFTKSLARELA--SRGITVNAVAPGFIETDMTDA 195

Length = 248

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 84.0 bits (208), Expect = 6e-19
 Identities = 60/212 (28%), Positives = 85/212 (40%), Gaps = 31/212 (14%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAM-- 85
            G  AIVTG + G+G   AR+L   G  V+++      G+    A   E+  A   A   
Sbjct: 4   KGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQ----AAAAELGDA---ARFF 56

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQ--FATNHLGHFL 143
            LDV+                  L++L+NNAGI+    + +    E +     N  G FL
Sbjct: 57  HLDVTDEDGWTAVVDTAREAFGRLDVLVNNAGILTGGTVETTTLEEWRRLLDINLTGVFL 116

Query: 144 LTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKL 203
            T  ++  MK+        G I+N+SS        EG+    + D +      AY  SK 
Sbjct: 117 GTRAVIPPMKEAG-----GGSIINMSS-------IEGL----VGDPAL----AAYNASKG 156

Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVT 235
           A     K  A      G  I  NS+HPG I T
Sbjct: 157 AVRGLTKSAALECATQGYGIRVNSVHPGYIYT 188

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 83.5 bits (207), Expect = 9e-19
 Identities = 56/216 (25%), Positives = 84/216 (38%), Gaps = 40/216 (18%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G  A+VT ASSGIG   AR LA  G  V +  RN    +     +      A V A+  D
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASEL--RAGGAGVLAVVAD 58

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAG-IMASPFM-LSKDNIELQFATNHLGHFLLTH 146
           ++    + +   +       ++IL+NNAG     PF  L+ ++    F    L    +  
Sbjct: 59  LTDPEDIDRLVEKAGDAFGRVDILVNNAGGPPPGPFAELTDEDWLEAFDLKLLSVIRIVR 118

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEAHR-----FAYSEGIRFDKINDESAYNSFGAYGQS 201
            +L  MK+        GRIVN+SS   +        S   R                  +
Sbjct: 119 AVLPGMKE-----RGWGRIVNISSLTVKEPEPNLVLSNVAR------------------A 155

Query: 202 KLANIL--HAKELAKHLKEDGVNITANSLHPGSIVT 235
            L  ++   ++ELA         +T NS+ PG I T
Sbjct: 156 GLIGLVKTLSRELAPD------GVTVNSVLPGYIDT 185

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 83.8 bits (208), Expect = 9e-19
 Identities = 68/220 (30%), Positives = 95/220 (43%), Gaps = 38/220 (17%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G  A+VTGA+SGIG E A  LA  G  V++A  N  A     EA+ K     K   + +
Sbjct: 3   KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA--GGKAIGVAM 60

Query: 88  DVSSL----ASVRKFASEYNSQGRPLNILINNAGI--MASPFMLSKDNIELQFATNHLGH 141
           DV+      A +      +   G  ++IL+NNAGI  +A       +  +   A    G 
Sbjct: 61  DVTDEEAINAGIDYAVETF---GG-VDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGA 116

Query: 142 FLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNS--FGAYG 199
           FL T   L  MK         GRI+N++S  H    S G        ++AY S   G  G
Sbjct: 117 FLTTKAALPIMKA-----QGGGRIINMAS-VHGLVGSAG--------KAAYVSAKHGLIG 162

Query: 200 QSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
            +K+     A E A H       +T N++ PG + T L R
Sbjct: 163 LTKVV----ALEGATH------GVTVNAICPGYVDTPLVR 192

Length = 258

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 83.2 bits (206), Expect = 1e-18
 Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 38/222 (17%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVK-EIPSAKVDAMELDV 89
            AI+TG+SSGIG  TA + A  G  + +  R+    ++ R++ ++  +   K+  +  D+
Sbjct: 5   VAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLVVADL 64

Query: 90  SSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQ--------FATNHLGH 141
           +      +  S   ++   L+IL+NNAGI+A      K   E Q           N    
Sbjct: 65  TEEEGQDRIISTTLAKFGRLDILVNNAGILA------KGGGEDQDIEEYDKVMNLNLRAV 118

Query: 142 FLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQS 201
             LT L +  + KT      +G IVNVSS               +    ++     Y  S
Sbjct: 119 IYLTKLAVPHLIKT------KGEIVNVSS---------------VAGGRSFPGVLYYCIS 157

Query: 202 KLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI 243
           K A     +  A  L   GV +  NS+ PG IVT   R  G+
Sbjct: 158 KAALDQFTRCTALELAPKGVRV--NSVSPGVIVTGFHRRMGM 197

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 82.3 bits (204), Expect = 2e-18
 Identities = 63/215 (29%), Positives = 90/215 (41%), Gaps = 26/215 (12%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G  A+VTGA+ G+G   A  LA  G  V       A  +++  A+  E    +  A+  
Sbjct: 6   AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAAL--EAAGGRAHAIAA 63

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFM--LSKDNIELQFATNHLGHFLLT 145
           D++  ASV++F     +    L+ L+NNAGI  S     L  D  +     N  G FL+ 
Sbjct: 64  DLADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLML 123

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
              L  +     + S  GRIVN++S+             K          GAY  SK A 
Sbjct: 124 RAALPHL-----RDSGRGRIVNLASDT------ALWGAPK---------LGAYVASKGAV 163

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY 240
           I   + LA+ L   G  IT N++ PG   T    Y
Sbjct: 164 IGMTRSLARELGGRG--ITVNAIAPGLTATEATAY 196

Length = 250

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 82.3 bits (204), Expect = 3e-18
 Identities = 50/205 (24%), Positives = 75/205 (36%), Gaps = 32/205 (15%)

Query: 25  IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDA 84
            D  G    +TG + GIG  TAR LA  G  V +   + A  K+    +        V  
Sbjct: 1   DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAEL------GLVVG 54

Query: 85  MELDVSSLASVRKFASEYNSQGRPLNILINNAGIM-ASPFM-LSKDNIELQFATNHLGHF 142
             LDV+  AS   F     +   P+++L+NNAG+M   PF+             N  G  
Sbjct: 55  GPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVI 114

Query: 143 LLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNS--FGAYGQ 200
           L + L    M          G +VNV+S A +           +   + Y +      G 
Sbjct: 115 LGSKLAAPRMVP-----RGRGHVVNVASLAGKIP---------VPGMATYCASKHAVVGF 160

Query: 201 SKLANILHAKELAKHLKEDGVNITA 225
           +  A      EL       GV+++ 
Sbjct: 161 TDAA----RLELRGT----GVHVSV 177

Length = 273

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 81.3 bits (201), Expect = 3e-18
 Identities = 53/211 (25%), Positives = 84/211 (39%), Gaps = 30/211 (14%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
            A+VTGAS GIG E AR LA  G  V + +RN      +  +         V+A+  D  
Sbjct: 2   VALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAALSASG------GDVEAVPYDAR 55

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLGHFLLTHLL 148
                R        +   +++L++NAGI   +     S   +E  F+ N +    LT  L
Sbjct: 56  DPEDARALVDALRDRFGRIDVLVHNAGIGRPTTLREGSDAELEAHFSINVIAPAELTRAL 115

Query: 149 LDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILH 208
           L  +     + +  GR+V ++S +       G R               Y  SK A    
Sbjct: 116 LPAL-----REAGSGRVVFLNSLS-------GKR--------VLAGNAGYSASKFALRAL 155

Query: 209 AKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
           A  L +   + GV ++A    PG + T + +
Sbjct: 156 AHALRQEGWDHGVRVSAVC--PGFVDTPMAQ 184

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 81.5 bits (202), Expect = 3e-18
 Identities = 54/212 (25%), Positives = 79/212 (37%), Gaps = 25/212 (11%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
             ++TG  SGIG   A   A RG  V++   N    ++    + K          + DVS
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGKVH--YYKCDVS 58

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGHFLLTHLL 148
               V + A +   +   + ILINNAG+++      L  + IE  F  N L HF  T   
Sbjct: 59  KREEVYEAAKKIKKEVGDVTILINNAGVVSGKKLLELPDEEIEKTFEVNTLAHFWTTKAF 118

Query: 149 LDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILH 208
           L  M +        G IV ++S A                  +      Y  SK A +  
Sbjct: 119 LPDMLER-----NHGHIVTIASVA---------------GLISPAGLADYCASKAAAVGF 158

Query: 209 AKELAKHLKEDGV-NITANSLHPGSIVTNLFR 239
            + L   LK  G   I    + P  I T +F+
Sbjct: 159 HESLRLELKAYGKPGIKTTLVCPYFINTGMFQ 190

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 80.0 bits (198), Expect = 1e-17
 Identities = 73/221 (33%), Positives = 97/221 (43%), Gaps = 53/221 (23%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAMELDV 89
           A+VTGAS GIG   A  LA  G  VI+  R+   G    E +V+E+ +   K   +  DV
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGA---EEVVEELKAYGVKALGVVCDV 57

Query: 90  SSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNI-----ELQF----ATNHLG 140
           S    V+    E   +  P++IL+NNAGI       ++DN+     E  +     TN  G
Sbjct: 58  SDREDVKAVVEEIEEELGPIDILVNNAGI-------TRDNLLMRMKEEDWDAVIDTNLTG 110

Query: 141 HFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQ 200
            F LT  +L  M K      R GRI+N+SS         G+              G  GQ
Sbjct: 111 VFNLTQAVLRIMIK-----QRSGRIINISSVV-------GLM-------------GNAGQ 145

Query: 201 -----SKLANILHAKELAKHLKEDGVNITANSLHPGSIVTN 236
                SK   I   K LAK L     NIT N++ PG I T+
Sbjct: 146 ANYAASKAGVIGFTKSLAKELA--SRNITVNAVAPGFIDTD 184

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 80.0 bits (198), Expect = 1e-17
 Identities = 56/212 (26%), Positives = 81/212 (38%), Gaps = 24/212 (11%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSS 91
           AI+TG +SGIG  TA++L  +G  V +  RN   G      +    P  K   ++ DV+S
Sbjct: 3   AIITGGASGIGLATAKLLLKKGAKVAILDRNENPG--AAAELQAINPKVKATFVQCDVTS 60

Query: 92  LASVRKFASEYNSQGRPLNILINNAGIMASPFMLS----KDNIELQFATNHLGHFLLTHL 147
              +     +   +   ++ILINNAGI+     L         E     N  G    T+L
Sbjct: 61  WEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPWEKTIDVNLTGVINTTYL 120

Query: 148 LLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANIL 207
            L  M K        G IVN+ S A         +F              Y  SK   + 
Sbjct: 121 ALHYMDKNKGGKG--GVIVNIGSVA---GLYPAPQFP------------VYSASKHGVVG 163

Query: 208 HAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
             + LA  L+     +  N++ PG   T L  
Sbjct: 164 FTRSLADLLEYK-TGVRVNAICPGFTNTPLLP 194

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 83.0 bits (206), Expect = 1e-17
 Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 34/213 (15%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G  A+VTGA+ GIG  TA+ LA  G  V++A  +  A +     +       +   +  
Sbjct: 421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELG---GPDRALGVAC 477

Query: 88  DVSSLASVR----KFASEYNSQGRPLNILINNAGIMAS-PFM-LSKDNIELQFATNHLGH 141
           DV+  A+V+    + A  +      ++I+++NAGI  S P    S ++    F  N  GH
Sbjct: 478 DVTDEAAVQAAFEEAALAFGG----VDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGH 533

Query: 142 FLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQS 201
           FL+    +  MK  AQ     G IV ++S+               N  +   +FGAYG +
Sbjct: 534 FLVAREAVRIMK--AQGL--GGSIVFIASK---------------NAVNPGPNFGAYGAA 574

Query: 202 KLANILHAKELAKHLKEDGVNITANSLHPGSIV 234
           K A +   ++LA  L  DG  I  N ++P ++V
Sbjct: 575 KAAELHLVRQLALELGPDG--IRVNGVNPDAVV 605

Length = 681

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 79.0 bits (195), Expect = 3e-17
 Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 34/223 (15%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G  A+VTG +SGIG   A+ LA  G  V++A  +    + V EA        +   ++ D
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAEA---AQGGPRALGVQCD 57

Query: 89  VSSLASVR----KFASEYNSQGRPLNILINNAGIMAS-PFM-LSKDNIELQFATNHLGHF 142
           V+S A V+    +   E+      L+I+++NAGI  S P    S ++       N  GHF
Sbjct: 58  VTSEAQVQSAFEQAVLEFGG----LDIVVSNAGIATSSPIAETSLEDWNRSMDINLTGHF 113

Query: 143 LLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSK 202
           L++      MK   Q     G IV  +S+               N  +   +  AY  +K
Sbjct: 114 LVSREAFRIMKS--QG--IGGNIVFNASK---------------NAVAPGPNAAAYSAAK 154

Query: 203 LANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILR 245
            A    A+ LA    EDG  I  N+++P ++      + G+ R
Sbjct: 155 AAEAHLARCLALEGGEDG--IRVNTVNPDAVFRGSKIWEGVWR 195

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 78.6 bits (194), Expect = 6e-17
 Identities = 61/212 (28%), Positives = 91/212 (42%), Gaps = 28/212 (13%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAM-- 85
            G  A+VTGASSGIG   A  LA  G +V   V N  + +D  E +V+EI +    A+  
Sbjct: 2   KGKVALVTGASSGIGKAIAIRLATAGANV---VVNYRSKEDAAEEVVEEIKAVGGKAIAV 58

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGIM--ASPFMLSKDNIELQFATNHLGHFL 143
           + DVS    V         +   L+IL+NNAG+   AS   ++ ++       N  G FL
Sbjct: 59  QADVSKEEDVVALFQSAIKEFGTLDILVNNAGLQGDASSHEMTLEDWNKVIDVNLTGQFL 118

Query: 144 LTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKL 203
                +   +    KS  +G+I+N+SS   +  +                    Y  SK 
Sbjct: 119 CAREAIKRFR----KSKIKGKIINMSSVHEKIPWP---------------GHVNYAASKG 159

Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVT 235
              +  K LA+     G  I  N++ PG+I T
Sbjct: 160 GVKMMTKTLAQEYAPKG--IRVNAIAPGAINT 189

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 78.6 bits (194), Expect = 6e-17
 Identities = 62/219 (28%), Positives = 92/219 (42%), Gaps = 38/219 (17%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G TA+VTGA+SGIG   AR LA  G +V++        +   +          V  +  D
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVA--GDAGGSVIYLPAD 58

Query: 89  VSSLASV----RKFASEYNSQGRPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGHF 142
           V+    +       A+E+      L+IL+NNAGI   +P      ++ +   A      F
Sbjct: 59  VTKEDEIADMIAAAAAEFGG----LDILVNNAGIQHVAPIEEFPPEDWDRIIAVMLTSAF 114

Query: 143 LLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNS--FGAYGQ 200
                 L  MKK        GRI+N++S AH    S          +SAY +   G  G 
Sbjct: 115 HTIRAALPHMKKQGW-----GRIINIAS-AHGLVASPF--------KSAYVAAKHGLIGL 160

Query: 201 SKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
           +K+     A E+A+H       IT N++ PG + T L  
Sbjct: 161 TKVL----ALEVAEH------GITVNAICPGYVRTPLVE 189

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 78.4 bits (194), Expect = 7e-17
 Identities = 50/147 (34%), Positives = 69/147 (46%), Gaps = 27/147 (18%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
            A+VTGASSGIG  TA  LA  G  V    RN A             P   V+ +ELDV+
Sbjct: 6   VALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAA----------PIPGVELLELDVT 55

Query: 91  SLASVRKFASEYNSQ-GRPLNILINNAGIMASPFML------SKDNIELQFATNHLGHFL 143
             ASV+    E  ++ GR +++L+NNAG+     +       S    +  F TN  G   
Sbjct: 56  DDASVQAAVDEVIARAGR-IDVLVNNAGVG----LAGAAEESSIAQAQALFDTNVFGILR 110

Query: 144 LTHLLLDTMKKTAQKSSREGRIVNVSS 170
           +T  +L  M+         GRI+N+SS
Sbjct: 111 MTRAVLPHMRA-----QGSGRIINISS 132

Length = 270

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 78.0 bits (192), Expect = 8e-17
 Identities = 68/214 (31%), Positives = 90/214 (42%), Gaps = 30/214 (14%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAM 85
            G  A+VTGASSGIG  TAR LA  G  V +A R      D  EA+  E+ +   K   +
Sbjct: 2   QGKVALVTGASSGIGEATARALAAEGAAVAIAARR----VDRLEALADELEAEGGKALVL 57

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQ--FATNHLGHFL 143
           ELDV+    V             L+IL+NNAGIM    +   D  +      TN LG   
Sbjct: 58  ELDVTDEQQVDAAVERTVEALGRLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMY 117

Query: 144 LTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKL 203
            TH  L       +     G IVN+SS A R A                NS   Y  +K 
Sbjct: 118 TTHAALPHHL--LRNK---GTIVNISSVAGRVAVR--------------NS-AVYNATKF 157

Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
                ++ L + + E GV +    + PG++ T L
Sbjct: 158 GVNAFSEGLRQEVTERGVRVVV--IEPGTVDTEL 189

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 77.4 bits (191), Expect = 1e-16
 Identities = 53/214 (24%), Positives = 90/214 (42%), Gaps = 32/214 (14%)

Query: 27  GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAME 86
             G  A++TG S GIG   A  L   G  V +  R+    ++    +  +     V  + 
Sbjct: 4   LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK---GNVLGLA 60

Query: 87  LDVSSLASVRKFASEYNSQGRPLNILINNAGI--MASPFMLSKDNIELQFATNHLGHFLL 144
            DV   A V++      +    L++LI NAG+   A    L+ +   L   TN  G F  
Sbjct: 61  ADVRDEADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYT 120

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNS--FGAYGQSK 202
               +  +K+        G I+N+SS A    ++ G         +AYN+  FG  G S+
Sbjct: 121 IKAAVPALKR------GGGYIINISSLAGTNFFAGG---------AAYNASKFGLVGFSE 165

Query: 203 LANILHAKELAKHLKEDGVNITANSLHPGSIVTN 236
            A +         L++ G+ ++  ++ PGS+ T+
Sbjct: 166 AAML--------DLRQYGIKVS--TIMPGSVATH 189

Length = 237

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 77.8 bits (192), Expect = 1e-16
 Identities = 64/210 (30%), Positives = 86/210 (40%), Gaps = 32/210 (15%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           GL  +VTG +SGIG   A   A  G  V +   + AA      A    +P AKV A   D
Sbjct: 11  GLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAA----LAATAARLPGAKVTATVAD 66

Query: 89  VSSLASVRK-FASEYNSQGRPLNILINNAGIMASPFM----LSKDNIELQFATNHLGHFL 143
           V+  A V + F +     G  L++L+NNAGI A P      ++ +  E   A N  G F 
Sbjct: 67  VADPAQVERVFDTAVERFGG-LDVLVNNAGI-AGPTGGIDEITPEQWEQTLAVNLNGQFY 124

Query: 144 LTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKL 203
                +  +K     S   G I+ +SS A R  Y    R               Y  SK 
Sbjct: 125 FARAAVPLLK----ASGHGGVIIALSSVAGRLGY--PGR-------------TPYAASKW 165

Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSI 233
           A +   K LA  L   G  I  N++ PG +
Sbjct: 166 AVVGLVKSLAIELGPLG--IRVNAILPGIV 193

Length = 264

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 76.4 bits (188), Expect = 3e-16
 Identities = 61/212 (28%), Positives = 91/212 (42%), Gaps = 26/212 (12%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHV-IMAVRNMAAGKDVREAIVKEIPSAKVDAMELDV 89
            A+VTG S GIG  TA +LA  G  V +   +N+ A ++V   I +     K   ++ D+
Sbjct: 3   IALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA--GGKAFVLQADI 60

Query: 90  SSLASVRKFASEYNSQGRPLNILINNAGIMASPFM---LSKDNIELQFATNHLGHFLLTH 146
           S    V    +  +    PL  L+NNAGI+ +      L+ + I    +TN  G+FL   
Sbjct: 61  SDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCR 120

Query: 147 LLLDTMKKTAQK-SSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
              + +K+ A K     G IVNVSS A R                A   +  Y  SK A 
Sbjct: 121 ---EAVKRMALKHGGSGGAIVNVSSAASRLG--------------APGEYVDYAASKGAI 163

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
                 L+  +   G+ +  N + PG I T +
Sbjct: 164 DTLTTGLSLEVAAQGIRV--NCVRPGFIYTEM 193

Length = 247

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 76.1 bits (188), Expect = 3e-16
 Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 9/148 (6%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEI--PSAKVDAME 86
           G   ++TG SSGIG   A+ L   G +VI+  R+ +  ++  E I  E      KV  + 
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYIS 60

Query: 87  LDVSSLASVRKFASEYNSQGRPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGHFLL 144
            D+S    V +  ++   +G P ++++N AGI +   F  L+ +  E     N+ G   +
Sbjct: 61  ADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISIPGLFEDLTAEEFERGMDVNYFGSLNV 120

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEA 172
            H +L  MK+      R G IV VSS+A
Sbjct: 121 AHAVLPLMKE-----QRPGHIVFVSSQA 143

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 76.3 bits (188), Expect = 3e-16
 Identities = 65/219 (29%), Positives = 102/219 (46%), Gaps = 39/219 (17%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAM 85
           +   AIVTGAS GIG   AR LA  G  V +   N A      + +V EI +A  +  A+
Sbjct: 4   SNKVAIVTGASRGIGAAIARRLAADGFAVAV---NYAGSAAAADELVAEIEAAGGRAIAV 60

Query: 86  ELDVSSLASVRK-FASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQ-----FATNHL 139
           + DV+  A+V + F +   + GR +++L+NNAG+M    + +  + +L+      ATN  
Sbjct: 61  QADVADAAAVTRLFDAAETAFGR-IDVLVNNAGVM---PLGTIADFDLEDFDRTIATNLR 116

Query: 140 GHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYG 199
           G F+        +++ A+   + GRI+N+S+                        +G Y 
Sbjct: 117 GAFV-------VLREAARHLGQGGRIINLSTSVIALPLP---------------GYGPYA 154

Query: 200 QSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLF 238
            SK A       LA  L+  G  IT N++ PG + T LF
Sbjct: 155 ASKAAVEGLVHVLANELR--GRGITVNAVAPGPVATELF 191

Length = 245

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 76.4 bits (188), Expect = 4e-16
 Identities = 66/215 (30%), Positives = 101/215 (46%), Gaps = 39/215 (18%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAI---VKEIPSA--KVDAM 85
            A++TGAS+GIG  +A  LA  G +V+          D+ EA+   V +I S   K  A 
Sbjct: 8   VAVITGASTGIGQASAIALAQEGAYVLAV--------DIAEAVSETVDKIKSNGGKAKAY 59

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQ---FATNHLGHF 142
            +D+S    V+ FASE   Q   +++L NNAG+  +   + +  +++     A +  G F
Sbjct: 60  HVDISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTF 119

Query: 143 LLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSK 202
           L+T +LL  M +        G I+N SS + + A             S YN+      +K
Sbjct: 120 LMTKMLLPLMMEQG------GSIINTSSFSGQAADL---------YRSGYNA------AK 158

Query: 203 LANILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
            A I   K +A     DG  I AN++ PG+I T L
Sbjct: 159 GAVINFTKSIAIEYGRDG--IRANAIAPGTIETPL 191

Length = 272

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 78.0 bits (192), Expect = 7e-16
 Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 23/205 (11%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSS 91
           A VTG + GIG ETAR LA  G HV++A  N+ A + V   I  +  + +  A+++DV+ 
Sbjct: 417 AFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTD 476

Query: 92  LASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIE--LQFATNHLGHFLLTHLLL 149
             +V+   ++       ++I++NNAGI  S         E  L       G+FL+     
Sbjct: 477 EQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAF 536

Query: 150 DTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHA 209
             M++        G IV ++S+   +A                    AY  +K A    A
Sbjct: 537 RQMREQGLG----GNIVFIASKNAVYAGKNAS---------------AYSAAKAAEAHLA 577

Query: 210 KELAKHLKEDGVNITANSLHPGSIV 234
           + LA      G+ +  N+++P +++
Sbjct: 578 RCLAAEGGTYGIRV--NTVNPDAVL 600

Length = 676

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 75.1 bits (185), Expect = 8e-16
 Identities = 45/147 (30%), Positives = 67/147 (45%), Gaps = 13/147 (8%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G  AIVTGA SG G   AR  A  G  V++A  N        E +  +I  A + A++ D
Sbjct: 5   GKVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGA----ERVAADIGEAAI-AIQAD 59

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIMASPFML---SKDNIELQFATNHLGHFLLT 145
           V+  A V        S+   L+IL+NNAGI      +    ++  +  FA N    +L  
Sbjct: 60  VTKRADVEAMVEAALSKFGRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVNVKSIYLSA 119

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEA 172
             L+  M++        G I+N++S A
Sbjct: 120 QALVPHMEE-----QGGGVIINIASTA 141

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 75.1 bits (185), Expect = 8e-16
 Identities = 54/215 (25%), Positives = 84/215 (39%), Gaps = 34/215 (15%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G  A+VTGAS GIG   A  LA  G ++++  RN    ++ ++ I KE    +  A   
Sbjct: 4   KGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKE--GVEATAFTC 61

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFML--SKDNIELQFATNHLGHFLLT 145
           DVS   +++            ++IL+NNAGI+         +         N  G F ++
Sbjct: 62  DVSDEEAIKAAVEAIEEDFGKIDILVNNAGIIRRHPAEEFPEAEWRDVIDVNLNGVFFVS 121

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSK--L 203
             +   M K        G+I+N+ S               +  E       AY  SK  +
Sbjct: 122 QAVARHMIKQGH-----GKIINICS---------------LLSELGGPPVPAYAASKGGV 161

Query: 204 ANILH--AKELAKHLKEDGVNITANSLHPGSIVTN 236
           A +    A E A+H       I  N++ PG   T 
Sbjct: 162 AGLTKALATEWARH------GIQVNAIAPGYFATE 190

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 75.1 bits (185), Expect = 9e-16
 Identities = 60/218 (27%), Positives = 85/218 (38%), Gaps = 42/218 (19%)

Query: 26  DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAM 85
           D +G + +VTGASSGIG   A  LA RG  V+ A RN AA   +             + +
Sbjct: 6   DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-------GCEPL 58

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGI--MASPFMLSKDNIELQFATNHLGHFL 143
            LDV   A++R   +         + L+N AGI  + S   ++ +  +   A N  G  L
Sbjct: 59  RLDVGDDAAIRAALAAAG----AFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAAL 114

Query: 144 LTHLLLDTMKKTAQKSSREGR---IVNVSSEA-HRFAYSEGIRFDKINDESAYNSFGAYG 199
                    +  A+     GR   IVNVSS+A                         AY 
Sbjct: 115 -------VARHVARAMIAAGRGGSIVNVSSQAALV----------------GLPDHLAYC 151

Query: 200 QSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
            SK A     + L   L   G  I  NS++P   +T +
Sbjct: 152 ASKAALDAITRVLCVELGPHG--IRVNSVNPTVTLTPM 187

Length = 245

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 74.6 bits (184), Expect = 1e-15
 Identities = 55/212 (25%), Positives = 85/212 (40%), Gaps = 32/212 (15%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
            A++TGASSGIG  TA   A  G  + +  R+  A + +   +       K  A  +D+S
Sbjct: 8   RALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST--GVKAAAYSIDLS 65

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGI--MASPFMLSKDNIELQFATNHLGHFLLTHLL 148
           +  ++    +E   Q    ++LINNAG+        +   + +     N    F     +
Sbjct: 66  NPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAV 125

Query: 149 LDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSF---GAYGQSKLAN 205
           L  M+         G I+NVSS A                  A N+F   GAY  SK A 
Sbjct: 126 LPGMRA-----RGGGLIINVSSIA------------------ARNAFPQWGAYCVSKAAL 162

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
               K LA+  +  G  I   ++  G++ T L
Sbjct: 163 AAFTKCLAEEERSHG--IRVCTITLGAVNTPL 192

Length = 241

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 74.8 bits (184), Expect = 1e-15
 Identities = 59/208 (28%), Positives = 77/208 (37%), Gaps = 27/208 (12%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVR-NMAAGKDVREAIVKEIPSAKVDAMELDV 89
            A+VTGA  GIG+  AR L   G  VI          KD  E         +V   ELDV
Sbjct: 4   IALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFE--EYGFTEDQVRLKELDV 61

Query: 90  SSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQ--FATNHLGHFLLTHL 147
           +      +  +E   +  P++IL+NNAGI          + E      TN    F +T  
Sbjct: 62  TDTEECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQP 121

Query: 148 LLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANIL 207
           L   M +        GRI+N+SS               +N          Y  +K   I 
Sbjct: 122 LFAAMCE-----QGYGRIINISS---------------VNGLKGQFGQTNYSAAKAGMIG 161

Query: 208 HAKELAKHLKEDGVNITANSLHPGSIVT 235
             K LA      G  IT N + PG I T
Sbjct: 162 FTKALASEGARYG--ITVNCIAPGYIAT 187

Length = 245

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 74.3 bits (183), Expect = 1e-15
 Identities = 57/214 (26%), Positives = 89/214 (41%), Gaps = 38/214 (17%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEI--PSAKVDAMELDV 89
            ++TGASSGIG   AR  A  G +V +A R      D  + +  E+  P+  V+   LDV
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARR----TDRLDELKAELLNPNPSVEVEILDV 56

Query: 90  SSLASVRKFASEYNSQGRPLNILINNAGI-MASPF--MLSKDNIELQFATNHLGHFLLTH 146
           +     +   +E  ++   L+++I NAG+   +    +  K   E    TN LG   +  
Sbjct: 57  TDEERNQLVIAELEAELGGLDLVIINAGVGKGTSLGDLSFKAFRET-IDTNLLGAAAILE 115

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFG---AYGQSKL 203
             L   +  A+     G +V +SS A                  A        AY  SK 
Sbjct: 116 AALPQFR--AKGR---GHLVLISSVA------------------ALRGLPGAAAYSASKA 152

Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
           A    A+ L   +K+ G+ +T   ++PG I T L
Sbjct: 153 ALSSLAESLRYDVKKRGIRVT--VINPGFIDTPL 184

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 74.4 bits (183), Expect = 1e-15
 Identities = 51/211 (24%), Positives = 78/211 (36%), Gaps = 32/211 (15%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G    +TG   G+G  TA  LA RG  V +  R  A         +  +P+  +    +D
Sbjct: 7   GKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQT----LPGVPADALRIGGID 62

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIMASPFM--LSKDNIELQFATNHLGHFLLTH 146
           +    + R+   E N Q   L+ L+N AG      +     D  +  +  N         
Sbjct: 63  LVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKT------ 116

Query: 147 LLLDTMKKTAQK--SSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
             L+  K       +S  GRIVN+ + A        ++        A    GAY  +K  
Sbjct: 117 -TLNASKAALPALTASGGGRIVNIGAGA-------ALK--------AGPGMGAYAAAKAG 160

Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSIVT 235
                + LA  L + G  IT N++ P  I T
Sbjct: 161 VARLTEALAAELLDRG--ITVNAVLPSIIDT 189

Length = 239

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 74.5 bits (184), Expect = 1e-15
 Identities = 66/222 (29%), Positives = 92/222 (41%), Gaps = 43/222 (19%)

Query: 24  GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVD 83
            +D +G T  VTGA+ GIG   A      G  VI        G D      ++ P     
Sbjct: 3   AMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVI--------GFDQAFLTQEDYP---FA 51

Query: 84  AMELDVSSLASVRKFASEYNSQGRPLNILINNAGI--MASPFMLSKDNIELQFATNHLGH 141
              LDVS  A+V +      ++  PL++L+N AGI  M +   LS ++ +  FA N  G 
Sbjct: 52  TFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGA 111

Query: 142 FLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQS 201
           F L   ++   +   Q+S   G IV V S A   A+   I               AYG S
Sbjct: 112 FNLFRAVMPQFR--RQRS---GAIVTVGSNA---AHVPRI------------GMAAYGAS 151

Query: 202 KLANILHAK----ELAKHLKEDGVNITANSLHPGSIVTNLFR 239
           K A    AK    ELA +       +  N + PGS  T++ R
Sbjct: 152 KAALTSLAKCVGLELAPY------GVRCNVVSPGSTDTDMQR 187

Length = 252

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 74.4 bits (183), Expect = 2e-15
 Identities = 65/210 (30%), Positives = 87/210 (41%), Gaps = 33/210 (15%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSS 91
            IVTGA+ GIG   AR L   G  VI          D    ++       +    LDV+ 
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVI--------ALD-LPFVLLLEYGDPLRLTPLDVAD 51

Query: 92  LASVRKFASEYNSQGRPLNILINNAGI--MASPFMLSKDNIELQFATNHLGHFLLTHLLL 149
            A+VR+  S   ++  P++ L+N AG+    +   LS ++ E  FA N  G F   +LL 
Sbjct: 52  AAAVREVCSRLLAEHGPIDALVNCAGVLRPGATDPLSTEDWEQTFAVNVTGVF---NLLQ 108

Query: 150 DTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHA 209
                   K  R G IV V+S A   A+   I            S  AYG SK A    +
Sbjct: 109 AVAPHM--KDRRTGAIVTVASNA---AHVPRI------------SMAAYGASKAALASLS 151

Query: 210 KELAKHLKEDGVNITANSLHPGSIVTNLFR 239
           K L   L   GV    N + PGS  T + R
Sbjct: 152 KCLGLELAPYGVR--CNVVSPGSTDTAMQR 179

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 74.3 bits (183), Expect = 2e-15
 Identities = 65/223 (29%), Positives = 85/223 (38%), Gaps = 33/223 (14%)

Query: 25  IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDA 84
               G  AIVTG S GIG   AR LA  G  V +   +    ++  E + K+    K  A
Sbjct: 4   FSLKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGV-KTKA 62

Query: 85  MELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFML--SKDNIELQFATNHLGHF 142
            + DVSS  SV K   +       ++ILI NAGI      L  + +        N  G F
Sbjct: 63  YKCDVSSQESVEKTFKQIQKDFGKIDILIANAGITVHKPALDYTYEQWNKVIDVNLNGVF 122

Query: 143 LLTHLLLDTMKKTAQKS-----SREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGA 197
                     KK  + S     S  G IVN                     ++AYN+   
Sbjct: 123 NCAQAAAKIFKKQGKGSLIITASMSGTIVNRPQP-----------------QAAYNA--- 162

Query: 198 YGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY 240
              SK A I  AK LA    +    I  NS+ PG I T+L  +
Sbjct: 163 ---SKAAVIHLAKSLAVEWAKYF--IRVNSISPGYIDTDLTDF 200

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 73.3 bits (180), Expect = 2e-15
 Identities = 61/208 (29%), Positives = 89/208 (42%), Gaps = 33/208 (15%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSS 91
           A+VTGAS GIG  TAR+L   G  V +  R+      +  A  +E+    V  +  DV  
Sbjct: 3   ALVTGASRGIGEATARLLHAEGYRVGICARD---EARLAAAAAQELE--GVLGLAGDVRD 57

Query: 92  LASVRKFASEYNSQGRPLNILINNAGI--MASPFMLSKDNIELQFATNHLGHFLLTHLLL 149
            A VR+           L+ L+NNAG+  M     L+ +   L   TN  G F   H   
Sbjct: 58  EADVRRAVDAMEEAFGGLDALVNNAGVGVMKPVEELTPEEWRLVLDTNLTGAFYCIHKAA 117

Query: 150 DTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNS--FGAYGQSKLANIL 207
             + +        G IVNV S A + A+  G         +AYN+  FG  G S+ A + 
Sbjct: 118 PALLRRGG-----GTIVNVGSLAGKNAFKGG---------AAYNASKFGLLGLSEAAML- 162

Query: 208 HAKELAKHLKEDGVNITANSLHPGSIVT 235
                   L+E  + +   ++ PGS+ T
Sbjct: 163 -------DLREANIRVV--NVMPGSVDT 181

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 74.0 bits (182), Expect = 4e-15
 Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 15/154 (9%)

Query: 23  QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKV 82
           Q +D TG   ++TGASSGIG   A   A RG  V+   R     +D+ +A+   I  A  
Sbjct: 34  QPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVAR----REDLLDAVADRITRAGG 89

Query: 83  DAMEL--DVSSLASVRKFASEYNSQGRPLNILINNAG-IMASPFMLSKD---NIELQFAT 136
           DAM +  D+S L +V    ++   +   ++ILINNAG  +  P   S D   ++E     
Sbjct: 90  DAMAVPCDLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVL 149

Query: 137 NHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSS 170
           N+     L   L   M +       +G I+NV++
Sbjct: 150 NYYAPLRLIRGLAPGMLE-----RGDGHIINVAT 178

Length = 293

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 73.1 bits (180), Expect = 5e-15
 Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 17/151 (11%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G  A++TGA+SGIG   A      G  V++A    A  +     I          A+ LD
Sbjct: 6   GKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI-----GPAAIAVSLD 60

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGI--MASPFMLSKDNIELQFATNHLGHFLLTH 146
           V+   S+ +  +    +   ++IL NNA +  MA    +S+D+ +  FA N  G F    
Sbjct: 61  VTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFF--- 117

Query: 147 LLLDTMKKTAQ---KSSREGRIVNVSSEAHR 174
                M+  A+   +  R G+I+N++S+A R
Sbjct: 118 ----LMQAVARHMVEQGRGGKIINMASQAGR 144

Length = 257

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 72.7 bits (179), Expect = 6e-15
 Identities = 80/252 (31%), Positives = 111/252 (44%), Gaps = 51/252 (20%)

Query: 22  TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAK 81
           T   D TG  A+VTGAS GIG   A++LA +G HVI++ R +   + V +AIV     A+
Sbjct: 1   TNLFDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAE 60

Query: 82  VDAMEL-DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPF---MLSKDNIELQ--FA 135
             A  + ++  + ++  FA      GR L+IL+NNA   A+P+   +L  D    Q    
Sbjct: 61  ALACHIGEMEQIDAL--FAHIRERHGR-LDILVNNAA--ANPYFGHILDTDLGAFQKTVD 115

Query: 136 TNHLGHFLLTHLLLDTMKKTAQKSSRE---GRIVNVSSEAHRFAYSEGIRFDKINDESAY 192
            N  G+F         M   A K  +E   G IVNV+S               +N  S  
Sbjct: 116 VNIRGYFF--------MSVEAGKLMKEQGGGSIVNVAS---------------VNGVSPG 152

Query: 193 NSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTN----LFRYNGILRGFC 248
           +  G Y  +K A I   K  AK     G  I  N+L PG   T     LF+ + IL    
Sbjct: 153 DFQGIYSITKAAVISMTKAFAKECAPFG--IRVNALLPGLTDTKFASALFKNDAIL---- 206

Query: 249 NTVGKLVLKNIP 260
               K  L +IP
Sbjct: 207 ----KQALAHIP 214

Length = 252

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 72.1 bits (177), Expect = 1e-14
 Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 33/219 (15%)

Query: 25  IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDA 84
           +D  G  A+VTGA  GIG  T + LA  G  V+   R  A   D+ +++V+E P   ++ 
Sbjct: 3   LDFAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQA---DL-DSLVRECPG--IEP 56

Query: 85  MELDVSSLASVRKFASEYNSQGRPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGHF 142
           + +D+S   +  +      S G P+++L+NNA + +  PF+ ++K+  +  F  N     
Sbjct: 57  VCVDLSDWDATEE---ALGSVG-PVDLLVNNAAVAILQPFLEVTKEAFDRSFDVNVRAVI 112

Query: 143 LLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSK 202
            ++ ++   M          G IVNVSS+A + A         + + + Y S  A     
Sbjct: 113 HVSQIVARGMIARGVP----GSIVNVSSQASQRA---------LTNHTVYCSTKA-ALDM 158

Query: 203 LANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN 241
           L  ++ A EL  H       I  NS++P  ++T++ R N
Sbjct: 159 LTKVM-ALELGPH------KIRVNSVNPTVVMTDMGRDN 190

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 71.7 bits (176), Expect = 1e-14
 Identities = 46/147 (31%), Positives = 66/147 (44%), Gaps = 15/147 (10%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
           TG T ++TG +SGIG   A+     G  VI+  RN     + +     E P   +     
Sbjct: 4   TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAK----AENPE--IHTEVC 57

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDN----IELQFATNHLGHFL 143
           DV+   S R+       +   LN+LINNAGI  +  +   ++     E + ATN L    
Sbjct: 58  DVADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIR 117

Query: 144 LTHLLLDTMKKTAQKSSREGRIVNVSS 170
           LT LLL  + +       E  I+NVSS
Sbjct: 118 LTALLLPHLLR-----QPEATIINVSS 139

Length = 245

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 71.6 bits (176), Expect = 1e-14
 Identities = 55/220 (25%), Positives = 90/220 (40%), Gaps = 30/220 (13%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
                ++TGA+  IG    + L   G  +I+A  N  A + ++E +   +   +V A+EL
Sbjct: 1   EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEEL-TNLYKNRVIALEL 59

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGI----MASPFM-LSKDNIELQFATNHLGHF 142
           D++S  S+++    Y  +   ++ILINNA        S F     +        N  G F
Sbjct: 60  DITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGAF 119

Query: 143 LLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFA-----YSEGIRFDKINDESAYNSFGA 197
           L +   +   KK       +G I+N++S     A     Y     +  +           
Sbjct: 120 LCSQAFIKLFKK-----QGKGSIINIASIYGVIAPDFRIYENTQMYSPVE---------- 164

Query: 198 YGQSKLANILH-AKELAKHLKEDGVNITANSLHPGSIVTN 236
           Y   K A I+H  K LAK+       I  N++ PG I+ N
Sbjct: 165 YSVIK-AGIIHLTKYLAKYYA--DTGIRVNAISPGGILNN 201

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 71.3 bits (175), Expect = 2e-14
 Identities = 61/239 (25%), Positives = 95/239 (39%), Gaps = 34/239 (14%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVD-AMELDVS 90
           A +TGA+ G+G   AR +A +G  V +   N AAG D   A +       V  A   DV+
Sbjct: 2   AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVT 61

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGI--MASPFMLSKDNIELQFATNHLGHFLLTHLL 148
             A  +   ++       L++L+NNAG+    +   +  D      A N    FL     
Sbjct: 62  DEAQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHA 121

Query: 149 LDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILH 208
           L  +     ++S+   IVN+SS A         +        A   + AY  SK A    
Sbjct: 122 LPYL-----RASQPASIVNISSVA-------AFK--------AEPDYTAYNASKAAVASL 161

Query: 209 AKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVL-----KNIPQG 262
            K +A      G+++  NS+HP  I T      GI+      +G+        + +P G
Sbjct: 162 TKSIALDCARRGLDVRCNSIHPTFIRT------GIVDPIFQRLGEEEATRKLARGVPLG 214

Length = 251

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 71.1 bits (175), Expect = 3e-14
 Identities = 50/149 (33%), Positives = 74/149 (49%), Gaps = 17/149 (11%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
            A+VTGASSGIG  TAR LA +G  V  A R +          ++++ S  V  + LDV+
Sbjct: 5   VALVTGASSGIGKATARRLAAQGYTVYGAARRVDK--------MEDLASLGVHPLSLDVT 56

Query: 91  SLASVRK-FASEYNSQGRPLNILINNAG--IMASPFMLSKDNIELQFATNHLGHFLLTHL 147
             AS++    +    +GR +++L+NNAG     +   +  D    QF  N  G   LT L
Sbjct: 57  DEASIKAAVDTIIAEEGR-IDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQL 115

Query: 148 LLDTMKKTAQKSSREGRIVNVSSEAHRFA 176
           +L  M+       R GRI+N+SS   +  
Sbjct: 116 VLPHMRA-----QRSGRIINISSMGGKIY 139

Length = 273

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 70.5 bits (173), Expect = 4e-14
 Identities = 63/208 (30%), Positives = 88/208 (42%), Gaps = 25/208 (12%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAMELDV 89
            ++TG S G+G   A  LA  G  VI+   +   G+   +A+   I +A  K   +  DV
Sbjct: 9   VLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDV 68

Query: 90  SSLASVRKFASEYNSQGRPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLGHFLLTHL 147
              A+ R        +   L+IL+NNAGI   + F  LS +  +     N  G F +T  
Sbjct: 69  RDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQA 128

Query: 148 LLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANIL 207
            L  M +      R GRIVN++S A       G+R               Y  SK   I 
Sbjct: 129 ALPPMIRA----RRGGRIVNIASVA-------GVR--------GNRGQVNYAASKAGLIG 169

Query: 208 HAKELAKHLKEDGVNITANSLHPGSIVT 235
             K LA  L   G  IT N++ PG+I T
Sbjct: 170 LTKTLANELAPRG--ITVNAVAPGAINT 195

Length = 249

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 70.0 bits (172), Expect = 6e-14
 Identities = 60/217 (27%), Positives = 90/217 (41%), Gaps = 33/217 (15%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL--D 88
             I+TGAS GIG   A  LA  G  +++A RN         ++ +E+     +A+ +  D
Sbjct: 3   VVIITGASEGIGRALAVRLARAGAQLVLAARNETR----LASLAQELADHGGEALVVPTD 58

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGI-MASPFMLSKDNIELQ--FATNHLGHFLLT 145
           VS   +  +      ++   ++IL+NNAGI M S F    D    +     N+LG    T
Sbjct: 59  VSDAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCT 118

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
           H  L  +K         G+IV VSS A             +   S Y +      SK A 
Sbjct: 119 HAALPHLKA------SRGQIVVVSSLAG---------LTGVPTRSGYAA------SKHAL 157

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG 242
                 L   L +DGV +T   + PG + T++ R   
Sbjct: 158 HGFFDSLRIELADDGVAVTV--VCPGFVATDI-RKRA 191

Length = 263

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 70.1 bits (172), Expect = 6e-14
 Identities = 48/149 (32%), Positives = 73/149 (48%), Gaps = 8/149 (5%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G  A+VTGA+ GIG   AR  A  G  V +A  + A  +    AI +++  A+V A+  D
Sbjct: 7   GKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPAD 66

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGI--MASPFMLSKDNIELQFATNHLGHFLLTH 146
           V+  ASV    +       PL++L+NNAGI   A P  ++ ++    FA +  G +    
Sbjct: 67  VTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCR 126

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEAHRF 175
            +L  M    +     G IVN++S  H F
Sbjct: 127 AVLPGM--VERGR---GSIVNIAS-THAF 149

Length = 260

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 71.6 bits (176), Expect = 7e-14
 Identities = 65/211 (30%), Positives = 94/211 (44%), Gaps = 27/211 (12%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSS 91
            +VTGA SGIG ETA   A  G  V+ +  + AA +   E I      A   A  +DVS 
Sbjct: 318 VVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELI--RAAGAVAHAYRVDVSD 375

Query: 92  LASVRKFASEYNSQ-GRPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGHFLLTHLL 148
             ++  FA    ++ G P +I++NNAGI MA  F+  S ++ +     N  G      L 
Sbjct: 376 ADAMEAFAEWVRAEHGVP-DIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLF 434

Query: 149 LDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILH 208
              M +        G IVNV+S A   AY+               S  AY  SK A ++ 
Sbjct: 435 GRQMVERGTG----GHIVNVASAA---AYAPS------------RSLPAYATSKAAVLML 475

Query: 209 AKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
           ++ L   L   G+ +TA  + PG + TN+  
Sbjct: 476 SECLRAELAAAGIGVTA--ICPGFVDTNIVA 504

Length = 582

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 69.4 bits (170), Expect = 8e-14
 Identities = 71/211 (33%), Positives = 100/211 (47%), Gaps = 26/211 (12%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVIMA-VRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
            I+TGAS GIG  TA + A RG  V +  +RN  A + V +AI ++   A   A+  DV+
Sbjct: 5   MIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEAL--AVAADVA 62

Query: 91  SLASV-RKFASEYNSQGRPLNILINNAGIMASPFMLSK-DNIELQ--FATNHLGHFLLTH 146
             A V R F +     GR L+ L+NNAGI+ +   L + D   L   FATN +G FL   
Sbjct: 63  DEADVLRLFEAVDRELGR-LDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAR 121

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI 206
             +  M  + +   R G IVNVSS A R                +   +  Y  SK A  
Sbjct: 122 EAVKRM--STRHGGRGGAIVNVSSMAARLG--------------SPGEYIDYAASKGAID 165

Query: 207 LHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
                LAK +  +G+ +  N++ PG I T +
Sbjct: 166 TMTIGLAKEVAAEGIRV--NAVRPGVIYTEI 194

Length = 248

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 69.3 bits (170), Expect = 1e-13
 Identities = 61/221 (27%), Positives = 94/221 (42%), Gaps = 26/221 (11%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G  A++TGA  GIG   A  LA  GV+V +  R     K V E +       KV     
Sbjct: 6   QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY--GVKVVIATA 63

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLGHFLLT 145
           DVS    V     +  ++   ++ILINNAGI     F+ L     E     N +G +  T
Sbjct: 64  DVSDYEEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYAT 123

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
             +L +M        + G I+N+SS A       G +       +A  S  AY  SK   
Sbjct: 124 RAVLPSM-----IERQSGDIINISSTA-------GQK------GAAVTS--AYSASKFGV 163

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRG 246
           +   + L + +++  + +TA  L P ++ T++    G+  G
Sbjct: 164 LGLTESLMQEVRKHNIRVTA--LTPSTVATDMAVDLGLTDG 202

Length = 239

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 69.3 bits (170), Expect = 1e-13
 Identities = 61/218 (27%), Positives = 86/218 (39%), Gaps = 38/218 (17%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
           + ++TG SSGIG   AR L   G  V    R        +E  V  + +  ++A +LD +
Sbjct: 6   SILITGCSSGIGAYCARALQSDGWRVFATCR--------KEEDVAALEAEGLEAFQLDYA 57

Query: 91  SLASVRKFASEY--NSQGRPLNILINNAGIMASPFM---LSKDNIELQFATNHLGHFLLT 145
              S+    ++    S GR L+ L NN G    P     L  + +  QF  N  G   LT
Sbjct: 58  EPESIAALVAQVLELSGGR-LDALFNN-GAYGQPGAVEDLPTEALRAQFEANFFGWHDLT 115

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
             ++  M+K  Q     GRIV  SS               I         GAY  SK A 
Sbjct: 116 RRVIPVMRKQGQ-----GRIVQCSS---------------ILGLVPMKYRGAYNASKFA- 154

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI 243
            +    L   ++  G  I  + + PG I T  FR N +
Sbjct: 155 -IEGLSLTLRMELQGSGIHVSLIEPGPIETR-FRANAL 190

Length = 277

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 69.0 bits (169), Expect = 1e-13
 Identities = 51/144 (35%), Positives = 66/144 (45%), Gaps = 18/144 (12%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
           + ++TG SSGIG E A  L  RG  V+ A R        +   V  + S     + LD+ 
Sbjct: 4   SVLITGCSSGIGLEAALELKRRGYRVLAACR--------KPDDVARMNSLGFTGILLDLD 55

Query: 91  SLASVRKFASEYN--SQGRPLNILINNAGI-MASPF-MLSKDNIELQFATNHLGHFLLTH 146
              SV + A E    +  R L  L NNAG  +  P   +S+  +E QF+TN  G   LT 
Sbjct: 56  DPESVERAADEVIALTDNR-LYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTM 114

Query: 147 LLLDTMKKTAQKSSREGRIVNVSS 170
           LLL  M         EGRIV  SS
Sbjct: 115 LLLPAM-----LPHGEGRIVMTSS 133

Length = 256

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 69.0 bits (169), Expect = 1e-13
 Identities = 62/213 (29%), Positives = 90/213 (42%), Gaps = 32/213 (15%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
               AIVTGA+ GIG   A  LA  G  V++A  N    + V + IV +  +A   A+++
Sbjct: 5   DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAI--AVQV 62

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIM--ASPFMLSK---DNIELQFATNHLGHF 142
           DVS   S +  A    S    ++ L+NNA I       +L     D  +   + N  G  
Sbjct: 63  DVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGAL 122

Query: 143 LLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSK 202
           + T  +   M K        G IVN SS A  + YS                   YG +K
Sbjct: 123 VCTRAVYKHMAKRGG-----GAIVNQSSTA-AWLYS-----------------NFYGLAK 159

Query: 203 LANILHAKELAKHLKEDGVNITANSLHPGSIVT 235
           +      ++LA+ L   G+NI  N++ PG I T
Sbjct: 160 VGLNGLTQQLAREL--GGMNIRVNAIAPGPIDT 190

Length = 250

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 68.9 bits (169), Expect = 1e-13
 Identities = 59/237 (24%), Positives = 98/237 (41%), Gaps = 34/237 (14%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
           +G  A+VTG +SGIG   A + A +G  V +  R+     +V   ++          +  
Sbjct: 14  SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRS-EDVAEVAAQLL----GGNAKGLVC 68

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGI--MASPFMLSKDNIELQFATNHLGHFLLT 145
           DVS   SV    +   S    ++IL+N+AG+  +A    +S+++ +     N  G FL+ 
Sbjct: 69  DVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMA 128

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
             +   M          G+IVN++S+A   A    +               AY  SK   
Sbjct: 129 QAVGRHMIAAGG-----GKIVNLASQAGVVALERHV---------------AYCASKAGV 168

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQG 262
           +   K LA  L+     IT N++ P  ++T L +       +    G+   K IP G
Sbjct: 169 VGMTKVLA--LEWGPYGITVNAISPTVVLTELGKK-----AWAGEKGERAKKLIPAG 218

Length = 255

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 68.5 bits (168), Expect = 2e-13
 Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 36/213 (16%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
            AIVT + SGIG   A +LA +G  + +   +   G       V+     + +  +LD+S
Sbjct: 4   VAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH-GVRAEIRQLDLS 62

Query: 91  SL----ASVRKFASEYNSQGRPLNILINNAGIM-ASPFM-LSKDNIELQFATNHLGHFLL 144
            L     ++ K        GR +++L+NNAG M  +PF+ +  D     F  +  G FL 
Sbjct: 63  DLPEGAQALDKLIQRL---GR-IDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLC 118

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNS--FGAYGQSK 202
           + +    M     K  + GRI+N++S  H      G         SAY +      G +K
Sbjct: 119 SQIAARHMV----KQGQGGRIINITS-VHEHTPLPG--------ASAYTAAKHALGGLTK 165

Query: 203 LANILHAKELAKHLKEDGVNITANSLHPGSIVT 235
                 A EL +H       I  N++ PG+I T
Sbjct: 166 AM----ALELVEH------GILVNAVAPGAIAT 188

Length = 256

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 68.1 bits (167), Expect = 2e-13
 Identities = 56/203 (27%), Positives = 81/203 (39%), Gaps = 26/203 (12%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSS 91
            +VTGA+ GIG   AR LA  G  V    RN    + +                +LDV+ 
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRN--FEQLLELVADLRRYGYPFATYKLDVAD 58

Query: 92  LASVRKFASEYNSQGRPLNILINNAGI--MASPFMLSKDNIELQFATNHLGHFLLTHLLL 149
            A+V +       +  P+++L+N AGI  + +   LS ++ +  FA N  G F ++  + 
Sbjct: 59  SAAVDEVVQRLEREYGPIDVLVNVAGILRLGAIDSLSDEDWQATFAVNTFGVFNVSQAVS 118

Query: 150 DTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHA 209
             MK   ++S   G IV V S A                        AY  SK A  +  
Sbjct: 119 PRMK--RRRS---GAIVTVGSNAANVPRM---------------GMAAYAASKAALTMLT 158

Query: 210 KELAKHLKEDGVNITANSLHPGS 232
           K L   L   G  I  N + PGS
Sbjct: 159 KCLGLELAPYG--IRCNVVSPGS 179

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 68.2 bits (167), Expect = 3e-13
 Identities = 64/217 (29%), Positives = 90/217 (41%), Gaps = 37/217 (17%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAME 86
           G TA+VTG + GIG      LA  G  V    RN        +  + E      KV+   
Sbjct: 6   GKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKE----LDECLTEWREKGFKVEGSV 61

Query: 87  LDVSSLASVRKFA-SEYNSQGRPLNILINNAG--IMASPFMLSKDNIELQFATNHLGHFL 143
            DVSS +  ++   +  +  G  LNIL+NNAG  I       ++++  L  +TN    + 
Sbjct: 62  CDVSSRSERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYTEEDYSLIMSTNFEAAYH 121

Query: 144 LT---HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQ 200
           L+   H LL        K+S  G IV +SS A       G+         A  S   YG 
Sbjct: 122 LSRLAHPLL--------KASGNGNIVFISSVA-------GV--------IAVPSGAPYGA 158

Query: 201 SKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
           +K A     + LA    +D  NI  N++ P  I T L
Sbjct: 159 TKGALNQLTRSLACEWAKD--NIRVNAVAPWVIATPL 193

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 68.0 bits (167), Expect = 3e-13
 Identities = 56/218 (25%), Positives = 79/218 (36%), Gaps = 49/218 (22%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVH-VIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
           G   +VTGA+ GIG      L  RG   V  A R+  +  D+   +V          ++L
Sbjct: 6   GKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTDLGPRVV---------PLQL 56

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASP-FMLSK--DNIELQFATNHLGHFLL 144
           DV+  ASV   A         + IL+NNAGI  +   +L    D +  +  TN+ G   +
Sbjct: 57  DVTDPASVAAAA----EAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAM 112

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
                  +          G IVNV S      +                + G Y  SK A
Sbjct: 113 ARAFAPVLAANGG-----GAIVNVLSVLSWVNFP---------------NLGTYSASKAA 152

Query: 205 -----NILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
                  L A ELA              +HPG I T++
Sbjct: 153 AWSLTQALRA-ELAPQ------GTRVLGVHPGPIDTDM 183

Length = 238

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 67.4 bits (165), Expect = 4e-13
 Identities = 55/207 (26%), Positives = 81/207 (39%), Gaps = 27/207 (13%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVR-NMAAGKDVREAIVKEIPSAKVDAMELDVS 90
           A+VTG S GIG   A  LA RG  V++  R +  A  +V   I  E    K   +  DVS
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEI--EELGGKAVVVRADVS 58

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLGHFLLTHLL 148
               V +  +    +   L++L++NA   A  P   L+  + + +  TN           
Sbjct: 59  QPQDVEEMFAAVKERFGRLDVLVSNAAAGAFRPLSELTPAHWDAKMNTNLKALVHCAQQA 118

Query: 149 LDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILH 208
              M++        GRIV +SS     A                 ++ A G +K A    
Sbjct: 119 AKLMRE-----RGGGRIVAISSLGSIRALP---------------NYLAVGTAKAALEAL 158

Query: 209 AKELAKHLKEDGVNITANSLHPGSIVT 235
            + LA  L   G  I  N++ PG I T
Sbjct: 159 VRYLAVELGPRG--IRVNAVSPGVIDT 183

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 67.4 bits (165), Expect = 4e-13
 Identities = 59/219 (26%), Positives = 81/219 (36%), Gaps = 34/219 (15%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAG-----KDVREAI---VKEIPSA 80
           G  A VTGAS GIG   A  LA  G  V++A +  + G     K +   I    +EI +A
Sbjct: 3   GKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIEAA 62

Query: 81  KVDAM--ELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNH 138
              A+   +DV     VR        Q   L+IL+NNAG +    +              
Sbjct: 63  GGQALPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAGAIWLSLVEDTPAKRFDLMQRV 122

Query: 139 L--GHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFG 196
              G +LL+   L  M K  Q     G I+N+S            R D            
Sbjct: 123 NLRGTYLLSQAALPHMVKAGQ-----GHILNISPP----LSLRPARGDV----------- 162

Query: 197 AYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVT 235
           AY   K         LA  L+  G+ +  NSL P + + 
Sbjct: 163 AYAAGKAGMSRLTLGLAAELRRHGIAV--NSLWPSTAIE 199

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 67.1 bits (164), Expect = 7e-13
 Identities = 61/217 (28%), Positives = 93/217 (42%), Gaps = 34/217 (15%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G  AI+TG +SGIG  TAR+ A  G  V++A  +  AG    +A+  E+    +  +  D
Sbjct: 4   GKVAIITGGASGIGEATARLFAKHGARVVIADIDDDAG----QAVAAELGDPDISFVHCD 59

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIMASP--FML--SKDNIELQFATNHLGHFLL 144
           V+  A VR       ++   L+I+ NNAG++ +P   +L  S +  E     N  G FL 
Sbjct: 60  VTVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYGAFLG 119

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFG--AYGQSK 202
           T      M       +++G IV+V+S A                       G  AY  SK
Sbjct: 120 TKHAARVMIP-----AKKGSIVSVASVA-----------------GVVGGLGPHAYTASK 157

Query: 203 LANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
            A +   +  A  L E G+ +  N + P  + T L  
Sbjct: 158 HAVLGLTRSAATELGEHGIRV--NCVSPYGVATPLLT 192

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 67.1 bits (164), Expect = 7e-13
 Identities = 57/214 (26%), Positives = 85/214 (39%), Gaps = 27/214 (12%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAMELD 88
            AIVTGAS GIG   A  LA RG   I          D    +V E+ +A  +    + D
Sbjct: 3   VAIVTGASRGIGRAIATELAARG-FDIAINDLPDD--DQATEVVAEVLAAGRRAIYFQAD 59

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIMASP----FMLSKDNIELQFATNHLGHFLL 144
           +  L+       +       L+ L+NNAGI   P      L++D+ +   A N  G F L
Sbjct: 60  IGELSDHEALLDQAWEDFGRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGPFFL 119

Query: 145 THLLLDTMKKTAQKSSR-EGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKL 203
           T  +   M +   +       I+ V+S               IN      + G Y  SK 
Sbjct: 120 TQAVARRMVEQPDRFDGPHRSIIFVTS---------------INAYLVSPNRGEYCISKA 164

Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
              +  + LA  L ++G  I  + + PG I T++
Sbjct: 165 GLSMATRLLAYRLADEG--IAVHEIRPGLIHTDM 196

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 67.5 bits (165), Expect = 8e-13
 Identities = 53/157 (33%), Positives = 80/157 (50%), Gaps = 10/157 (6%)

Query: 22  TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA- 80
           T   D +G  A+VTGA++G+G   A  LA  G  V+  V ++A+  D    ++ EI +A 
Sbjct: 5   TNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVV--VNDVASALDA-SDVLDEIRAAG 61

Query: 81  -KVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASP--FMLSKDNIELQFATN 137
            K  A+  D+S  A+  +  +     G  L+I++NNAGI      F +S +  +   A +
Sbjct: 62  AKAVAVAGDISQRATADELVATAVGLGG-LDIVVNNAGITRDRMLFNMSDEEWDAVIAVH 120

Query: 138 HLGHFLLTHLLLDTMKKTAQKS--SREGRIVNVSSEA 172
             GHFLLT       +  A+ +     GRIVN SSEA
Sbjct: 121 LRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEA 157

Length = 306

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 66.3 bits (162), Expect = 1e-12
 Identities = 61/212 (28%), Positives = 89/212 (41%), Gaps = 26/212 (12%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G TA++TGAS GIG   AR     G  V++  R+  A    R+ + +E P  +V  +  D
Sbjct: 9   GQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAAD 68

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIMASPFML--SKDNIELQFATNHLGHFLLTH 146
           VS     R            L+IL+NNAG       +  ++D     F TN    F L+ 
Sbjct: 69  VSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSR 128

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGA-YGQSKLAN 205
                +K+ A  +     IVN+ S +       G+          +   GA YG +K A 
Sbjct: 129 YAHPLLKQHASSA-----IVNIGSVS-------GL---------THVRSGAPYGMTKAAL 167

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
           +   + LA    EDG  I  N++ P  I T L
Sbjct: 168 LQMTRNLAVEWAEDG--IRVNAVAPWYIRTPL 197

Length = 257

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 68.1 bits (167), Expect = 1e-12
 Identities = 51/162 (31%), Positives = 73/162 (45%), Gaps = 23/162 (14%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAME 86
           G   ++TGASSGIG  TA  +A  G  V +  RN     +  + +V EI +      A  
Sbjct: 371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARN----GEALDELVAEIRAKGGTAHAYT 426

Query: 87  LDVSSLASVRKFASEYNSQGRPLNILINNAG--IMASPFMLSKD---NIELQFATNHLGH 141
            D++  A+V     +  ++   ++ L+NNAG  I  S    S D   + E   A N+ G 
Sbjct: 427 CDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRS-VENSTDRFHDYERTMAVNYFGA 485

Query: 142 FLLTHLLLDTMKKTAQKSSREGRIVNVSS-----EAHRF-AY 177
             L   LL  M    ++    G +VNVSS      A RF AY
Sbjct: 486 VRLILGLLPHM--RERRF---GHVVNVSSIGVQTNAPRFSAY 522

Length = 657

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 66.0 bits (161), Expect = 1e-12
 Identities = 67/213 (31%), Positives = 96/213 (45%), Gaps = 28/213 (13%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHV-IMAVRNMAAGKDVREAIVKEIPSAKVDAMELDV 89
             ++TGAS GIG  TA + A RG  V I   R+ AA ++  +A+       +   +  DV
Sbjct: 4   VVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAV--RAAGGRACVVAGDV 61

Query: 90  SSLASV-RKFASEYNSQGRPLNILINNAGIMASPFM----LSKDNIELQFATNHLGHFLL 144
           ++ A V   F +  ++ GR L+ L+NNAGI+A P M    +    +   F TN LG +L 
Sbjct: 62  ANEADVIAMFDAVQSAFGR-LDALVNNAGIVA-PSMPLADMDAARLRRMFDTNVLGAYLC 119

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
                  +     +  R G IVNVSS A R                + N +  Y  SK A
Sbjct: 120 AREAARRLST--DRGGRGGAIVNVSSIASRLG--------------SPNEYVDYAGSKGA 163

Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
                  LAK L   GV +  N++ PG I T +
Sbjct: 164 VDTLTLGLAKELGPHGVRV--NAVRPGLIETEI 194

Length = 248

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 65.6 bits (160), Expect = 2e-12
 Identities = 68/217 (31%), Positives = 93/217 (42%), Gaps = 36/217 (16%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVD-AMEL 87
           G  AIVTGA +GIG   A  LA  G  V++A  +  A + V   I     + +VD   E 
Sbjct: 3   GKVAIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQIAGGALALRVDVTDEQ 62

Query: 88  DVSSL--ASVRKFASEYNSQGRPLNILINNAGIM-ASPFMLSKD--NIELQFATNHLGHF 142
            V++L   +V +F          L++L+NNAG M  +P ++  D    +   A N  G F
Sbjct: 63  QVAALFERAVEEFGG--------LDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGTF 114

Query: 143 LLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSK 202
           L        M      +   G IVN+SS               I  +S    +GAYG SK
Sbjct: 115 LCCRHAAPRM-----IARGGGSIVNLSS---------------IAGQSGDPGYGAYGASK 154

Query: 203 LANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
            A     + LA  L+  G  I  N+L PG I T L  
Sbjct: 155 AAIRNLTRTLAAELRHAG--IRCNALAPGLIDTPLLL 189

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 65.2 bits (159), Expect = 2e-12
 Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 28/222 (12%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA---KVDA 84
            G  A+VTGAS GIG   AR L   G+ V+   R +    D  EA+  E  SA    +  
Sbjct: 5   RGRVALVTGASVGIGAAVARALVQHGMKVVGCARRV----DKIEALAAECQSAGYPTLFP 60

Query: 85  MELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQ--FATNHLGHF 142
            + D+S+   +    S   +Q + +++ INNAG+     +LS      +  F  N L   
Sbjct: 61  YQCDLSNEEQILSMFSAIRTQHQGVDVCINNAGLARPEPLLSGKTEGWKEMFDVNVLALS 120

Query: 143 LLTHLLLDTMKKTAQKSSREGRIVNVSS-EAHRFAYSEGIRFDKINDESAYNSFGAYGQS 201
           + T     +MK   +++  +G I+N++S   HR                  + F  Y  +
Sbjct: 121 ICTREAYQSMK---ERNVDDGHIININSMSGHR--VPPV------------SVFHFYAAT 163

Query: 202 KLANILHAKELAKHLKEDGVNITANSLHPGSIVTN-LFRYNG 242
           K A     + L + L+E   +I A S+ PG + T   F+ + 
Sbjct: 164 KHAVTALTEGLRQELREAKTHIRATSISPGLVETEFAFKLHD 205

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 65.2 bits (159), Expect = 3e-12
 Identities = 62/216 (28%), Positives = 95/216 (43%), Gaps = 30/216 (13%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIM-AVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
           G  A+VTG++SGIG   AR LA  G ++++    + A  + VR  +  +    KV     
Sbjct: 2   GKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAK-HGVKVLYHGA 60

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGI--MASPFMLSKDNIELQFATNHLGHFLLT 145
           D+S  A++    +    Q   ++IL+NNAGI  +A       +  +   A N    F  T
Sbjct: 61  DLSKPAAIEDMVAYAQRQFGGVDILVNNAGIQHVAPIEDFPTEKWDAIIALNLSAVFHTT 120

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNS--FGAYGQSKL 203
            L L  MKK        GRI+N++S  H    S          +SAY +   G  G +K+
Sbjct: 121 RLALPHMKKQGW-----GRIINIAS-VHGLVASAN--------KSAYVAAKHGVVGLTKV 166

Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
                A E A         +T N++ PG ++T L  
Sbjct: 167 V----ALETAGT------GVTCNAICPGWVLTPLVE 192

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 64.7 bits (158), Expect = 5e-12
 Identities = 45/163 (27%), Positives = 65/163 (39%), Gaps = 31/163 (19%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRN----MAAGKDVREAIVKEIPSAKVD 83
            G   ++TGAS GIG   A   A  G H+ +  R+     A   D+R A         V 
Sbjct: 6   AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAH-----GVDVA 60

Query: 84  AMELDVSSLASVRKFASEYNSQGRPLNILINNAG-IMASPFMLSKDNIELQ-----FATN 137
              LD+SS  +  + A+E       ++IL+NNAG I         D+++       +   
Sbjct: 61  VHALDLSSPEAREQLAAEAG----DIDILVNNAGAIPGGGL----DDVDDAAWRAGWELK 112

Query: 138 HLGHFLLTHLLLDTMKKTAQKSSREGRIVNV---SSEAHRFAY 177
             G+  LT L    M     K+   G IVNV   + E     Y
Sbjct: 113 VFGYIDLTRLAYPRM-----KARGSGVIVNVIGAAGENPDADY 150

Length = 259

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 64.9 bits (159), Expect = 5e-12
 Identities = 60/228 (26%), Positives = 90/228 (39%), Gaps = 45/228 (19%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G  A++TG    +G   A+ LA  G  V +  RN        EA+V EI +A  +A+ +
Sbjct: 9   KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKA----EAVVAEIKAAGGEALAV 64

Query: 88  --DVSSLASVRKFASEYNSQGRPLNILINNAG-------------IMASP----FMLSKD 128
             DV    S+ +   +      P +ILIN AG              +  P    F L ++
Sbjct: 65  KADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEE 124

Query: 129 NIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIND 188
             E  F  N LG  L T +    M    +K    G I+N+SS     A++   +      
Sbjct: 125 GFEFVFDLNLLGTLLPTQVFAKDM--VGRK---GGNIINISSMN---AFTPLTKVP---- 172

Query: 189 ESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTN 236
                   AY  +K A     + LA H  + G  I  N++ PG  +T 
Sbjct: 173 --------AYSAAKAAISNFTQWLAVHFAKVG--IRVNAIAPGFFLTE 210

Length = 278

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 64.0 bits (156), Expect = 5e-12
 Identities = 58/240 (24%), Positives = 94/240 (39%), Gaps = 41/240 (17%)

Query: 31  TAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDV 89
           T +VTGA+ GIG      L   G   V  AVR+  +       +V +    KV  + LDV
Sbjct: 5   TVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAH----LVAKYGD-KVVPLRLDV 59

Query: 90  SSLASVRKFASEYNSQGRPLNILINNAGI------MASPFMLSKDNIELQFATNHLGHFL 143
           +   S++  A    +Q + ++++INNAG+      +    +   + ++ +   N  G   
Sbjct: 60  TDPESIKAAA----AQAKDVDVVINNAGVLKPATLLEEGAL---EALKQEMDVNVFGLLR 112

Query: 144 LTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKL 203
           L       +K         G IVN++S               +     + + G Y  SK 
Sbjct: 113 LAQAFAPVLKANGG-----GAIVNLNS---------------VASLKNFPAMGTYSASKS 152

Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGA 263
           A     + L   L   G  +   S+HPG I T +    G  +    TV + VLK +  G 
Sbjct: 153 AAYSLTQGLRAELAAQGTLVL--SVHPGPIDTRMAAGAGGPKESPETVAEAVLKALKAGE 210

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 64.2 bits (157), Expect = 6e-12
 Identities = 51/197 (25%), Positives = 82/197 (41%), Gaps = 40/197 (20%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
              T ++TGA SG G E A  LA +G +VI  V+       +R    +      +   +L
Sbjct: 1   MSKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR--GLALRVEKL 58

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFM--LSKDNIELQFATNHLGHFLLT 145
           D++  A  R  A+E++     +++L+NNAGI  +  +  +  + +   F TN  G   LT
Sbjct: 59  DLTD-AIDRAQAAEWD-----VDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELT 112

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRF--AYSEGIRFDKINDESAYNSFGAYGQSK- 202
              +  M   A+     G++V  SS A      ++                 GAY  SK 
Sbjct: 113 QGFVRKM--VARGK---GKVVFTSSMAGLITGPFT-----------------GAYCASKH 150

Query: 203 ----LANILHAKELAKH 215
               +A  +HA EL   
Sbjct: 151 ALEAIAEAMHA-ELKPF 166

Length = 257

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 64.9 bits (159), Expect = 6e-12
 Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 13/146 (8%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL--D 88
             ++TGAS+G+G  TAR  A RG  V++  R     + +      EI +A  +A+ +  D
Sbjct: 10  VVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAA----EIRAAGGEALAVVAD 65

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGHFLLTH 146
           V+   +V+  A     +  P++  +NNA + +  PF  ++ +         +LG    T 
Sbjct: 66  VADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTL 125

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEA 172
             L  M+         G I+ V S  
Sbjct: 126 AALRHMRPR-----DRGAIIQVGSAL 146

Length = 334

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 64.1 bits (156), Expect = 7e-12
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 30/212 (14%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEI--PSAKVDAM 85
           TG TA++TGA  GIG   ARV A  G ++I+         ++ + +  E+     +  A+
Sbjct: 5   TGKTALITGALQGIGEGIARVFARHGANLILL----DISPEIEK-LADELCGRGHRCTAV 59

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLGHFL 143
             DV   ASV         +   ++IL+NNAG+     F+ +S ++ +     N  G + 
Sbjct: 60  VADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWN 119

Query: 144 LTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKL 203
           +T  +L  M        ++GRIV +SS          +  D + D        AY  +K 
Sbjct: 120 VTKAVLPEMIA-----RKDGRIVMMSS----------VTGDMVADPGE----TAYALTKA 160

Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVT 235
           A +   K LA    +    I  N++ PG + T
Sbjct: 161 AIVGLTKSLAVEYAQS--GIRVNAICPGYVRT 190

Length = 263

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 63.8 bits (156), Expect = 7e-12
 Identities = 53/215 (24%), Positives = 85/215 (39%), Gaps = 33/215 (15%)

Query: 31  TAIVTGASSGIGTETARVLALRG--VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
             I+TGAS GIG   A  L  RG    V++  R+      ++E   +  P  +V  ++ D
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLARSEE---PLQELKEELRPGLRVTTVKAD 57

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIMASPFM----LSKDNIELQFATNHLGHFLL 144
           +S  A V +            ++LINNAG +  P      +  D ++  F  N      L
Sbjct: 58  LSDAAGVEQLLEAIRKLDGERDLLINNAGSLG-PVSKIEFIDLDELQKYFDLNLTSPVCL 116

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
           T  LL    +  +K   +  +VNVSS A                 + +  +G Y  SK A
Sbjct: 117 TSTLL----RAFKKRGLKKTVVNVSSGAAV---------------NPFKGWGLYCSSKAA 157

Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
                    + L  +  ++   S  PG + T++ R
Sbjct: 158 ----RDMFFRVLAAEEPDVRVLSYAPGVVDTDMQR 188

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 65.2 bits (160), Expect = 7e-12
 Identities = 66/214 (30%), Positives = 95/214 (44%), Gaps = 39/214 (18%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G  A+VTGA+ GIG   A VLA  G HV+  +   AAG+ +  A+   +      A+ LD
Sbjct: 210 GKVALVTGAARGIGAAIAEVLARDGAHVV-CLDVPAAGEAL-AAVANRV---GGTALALD 264

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGI-----MASPFMLSKDNIELQFATNHLGHFL 143
           +++  +  + A     +   L+I+++NAGI     +A+   + +   +   A N L    
Sbjct: 265 ITAPDAPARIAEHLAERHGGLDIVVHNAGITRDKTLAN---MDEARWDSVLAVNLLAPLR 321

Query: 144 LTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGA--YGQS 201
           +T  LL      A      GRIV VSS +       GI         A N  G   Y  S
Sbjct: 322 ITEALLA-----AGALGDGGRIVGVSSIS-------GI---------AGN-RGQTNYAAS 359

Query: 202 KLANILHAKELAKHLKEDGVNITANSLHPGSIVT 235
           K   I   + LA  L E G  IT N++ PG I T
Sbjct: 360 KAGVIGLVQALAPLLAERG--ITINAVAPGFIET 391

Length = 450

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 64.0 bits (156), Expect = 7e-12
 Identities = 59/230 (25%), Positives = 89/230 (38%), Gaps = 50/230 (21%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPS--AKVDAME 86
              A++TG +  +G   AR LA  G  V    RN   G    + + KEI +   +  A+ 
Sbjct: 5   NKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKG----DKVAKEITALGGRAIALA 60

Query: 87  LDVSSLASVRKFASEYNSQGRPLNILINNAG----------------IMASPFMLSKDNI 130
            DV   AS+ +   E  +Q   ++ILIN AG                   + F L ++  
Sbjct: 61  ADVLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEGW 120

Query: 131 ELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDES 190
           E  F  N  G FL + +    M +  QK    G I+N+SS                   +
Sbjct: 121 EFVFDLNLNGSFLPSQVFGKDMLE--QKG---GSIINISS------------------MN 157

Query: 191 AYNSFG---AYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
           A++      AY  +K A     + LA      GV +  N++ PG  VT  
Sbjct: 158 AFSPLTKVPAYSAAKAAVSNFTQWLAVEFATTGVRV--NAIAPGFFVTPQ 205

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 63.9 bits (156), Expect = 8e-12
 Identities = 54/215 (25%), Positives = 91/215 (42%), Gaps = 28/215 (13%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAM--ELD 88
            AI+TGA+ GIG   A  LA  G ++++A  N+       ++ ++EI  A  +A+    D
Sbjct: 4   VAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAA---KSTIQEISEAGYNAVAVGAD 60

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLS--KDNIELQFATNHLGHFLLTH 146
           V+    V     +   +    ++++NNAGI     +L+  +++++  +A N  G      
Sbjct: 61  VTDKDDVEALIDQAVEKFGSFDVMVNNAGIAPITPLLTITEEDLKKVYAVNVFGVLFGIQ 120

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI 206
                 KK        G+I+N SS A    +                  GAY  SK A  
Sbjct: 121 AAARQFKKLGHG----GKIINASSIAGVQGFPN---------------LGAYSASKFAVR 161

Query: 207 LHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN 241
              +  A+ L   G  IT N+  PG + T ++ Y 
Sbjct: 162 GLTQTAAQELAPKG--ITVNAYAPGIVKTEMWDYI 194

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 63.3 bits (154), Expect = 1e-11
 Identities = 54/211 (25%), Positives = 88/211 (41%), Gaps = 30/211 (14%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G  A++TG + GIG   A      G  V +      + ++  EA  KE+    V  ++ D
Sbjct: 7   GKVALITGGTRGIGRAIAEAFLREGAKVAV---LYNSAEN--EA--KELREKGVFTIKCD 59

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIMAS-PF-MLSKDNIELQFATNHLGHFLLTH 146
           V +   V+K       +   +++L+NNAGIM   PF    ++        N  G    T+
Sbjct: 60  VGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTY 119

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI 206
             L  +K      S+ G IVN++S A     +EG  F              Y  +K   I
Sbjct: 120 EFLPLLKL-----SKNGAIVNIASNAGIGTAAEGTTF--------------YAITKAGII 160

Query: 207 LHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
           +  + LA  L +    I  N++ PG + T++
Sbjct: 161 ILTRRLAFELGK--YGIRVNAVAPGWVETDM 189

Length = 255

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 63.1 bits (154), Expect = 1e-11
 Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 15/154 (9%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            GL A+VTG +SG+G  T   L  +G  V++     + G+ V +             + +
Sbjct: 1   KGLVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPGETVAKLGD------NCRFVPV 54

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNI------ELQFA--TNHL 139
           DV+S   V+   +   ++   L+I++N AGI  +    +K           Q     N +
Sbjct: 55  DVTSEKDVKAALALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQRVINVNLI 114

Query: 140 GHFLLTHLLLDTMKKTAQKSSRE-GRIVNVSSEA 172
           G F +  L    M K       E G I+N +S A
Sbjct: 115 GTFNVIRLAAGAMGKNEPDQGGERGVIINTASVA 148

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 62.6 bits (153), Expect = 2e-11
 Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 11/143 (7%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSS 91
           A+VTGA+ GIG   A  LA RG +VI+  R       V + I ++    +   +  D S+
Sbjct: 4   AVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKY-GVETKTIAADFSA 62

Query: 92  LASVRKFASEYNSQGRPLNILINNAGI---MASPFM-LSKDNIELQFATNHLGHFLLTHL 147
              + +   E   +G  + IL+NN GI   +   F+   +D ++     N +    +T L
Sbjct: 63  GDDIYE-RIEKELEGLDIGILVNNVGISHSIPEYFLETPEDELQDIINVNVMATLKMTRL 121

Query: 148 LLDTMKKTAQKSSREGRIVNVSS 170
           +L  M K      ++G IVN+SS
Sbjct: 122 ILPGMVK-----RKKGAIVNISS 139

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 62.4 bits (152), Expect = 2e-11
 Identities = 53/212 (25%), Positives = 85/212 (40%), Gaps = 32/212 (15%)

Query: 33  IVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL--DVS 90
           ++TGASSGIG  TA   A RG  V++A R+     +    + +E+     +A+ +  DV+
Sbjct: 4   VITGASSGIGRATALAFAERGAKVVLAARS----AEALHELAREVRELGGEAIAVVADVA 59

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKD----NIELQFATNHLGHFLLTH 146
             A V + A     +   ++  +NNAG+  + F   +D         F  N+LGH   T 
Sbjct: 60  DAAQVERAADTAVERFGRIDTWVNNAGV--AVFGRFEDVTPEEFRRVFDVNYLGHVYGTL 117

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI 206
             L  +++        G ++NV S                          AY  SK A  
Sbjct: 118 AALPHLRRRG-----GGALINVGSLLGY----RSAPLQ-----------AAYSASKHAVR 157

Query: 207 LHAKELAKHLKEDGVNITANSLHPGSIVTNLF 238
              + L   L  DG  I+   + P ++ T  F
Sbjct: 158 GFTESLRAELAHDGAPISVTLVQPTAMNTPFF 189

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 62.5 bits (152), Expect = 2e-11
 Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 13/145 (8%)

Query: 31  TAIVTGASSGIGTETARVLA---LRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
             ++TG SSGIG   A  LA    +   V   +R++     + EA    +    ++ ++L
Sbjct: 2   VVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEA-AGALAGGTLETLQL 60

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGI--MASPFMLSKDNIELQFATNHLGHFLLT 145
           DV    SV   A+      R +++L+ NAG+  +     LS+D +   F  N  G   + 
Sbjct: 61  DVCDSKSVA--AAVERVTERHVDVLVCNAGVGLLGPLEALSEDAMASVFDVNVFGTVRML 118

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSS 170
              L  MK+        GRI+  SS
Sbjct: 119 QAFLPDMKR-----RGSGRILVTSS 138

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 62.0 bits (151), Expect = 3e-11
 Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 9/151 (5%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G  A+VTG++ G+G E AR LA  G HV++  RN A  +    A+     +A  +A+  
Sbjct: 10  AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAA--EALAF 67

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIM-ASPFM-LSKDNIELQFATNHLGHFLLT 145
           D++   +V    +  +++   L+IL+NN G     P   L    I     T+ +   LL+
Sbjct: 68  DIADEEAVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLS 127

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFA 176
            L    MK+        GRI+ ++S A + A
Sbjct: 128 RLAAQRMKRQGY-----GRIIAITSIAGQVA 153

Length = 256

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 61.7 bits (150), Expect = 4e-11
 Identities = 55/211 (26%), Positives = 83/211 (39%), Gaps = 32/211 (15%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL--D 88
             +VTG+  GIG   A  LA  G  V++   N     +     +K +     + + +  D
Sbjct: 8   VVVVTGSGRGIGRAIAVRLAKEGSLVVV---NAKKRAEEMNETLKMVKENGGEGIGVLAD 64

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGI-MASPFMLSKDN-IELQFATNHLGHFLLTH 146
           VS+       A     +    +IL+NNAG+ + SPF+   D  I+   +T+       + 
Sbjct: 65  VSTREGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQ 124

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI 206
            L   M++        G IVN++S A       GIR               YG  K A I
Sbjct: 125 ELAKEMREG-------GAIVNIASVA-------GIR--------PAYGLSIYGAMKAAVI 162

Query: 207 LHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
              K LA  L      I  N++ PG + T L
Sbjct: 163 NLTKYLALELAP---KIRVNAIAPGFVKTKL 190

Length = 252

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 62.0 bits (151), Expect = 4e-11
 Identities = 30/93 (32%), Positives = 46/93 (49%)

Query: 25  IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDA 84
           I   G  A+VTG SSGIG  T  +L   G  V +  R+          + ++ P A++ A
Sbjct: 4   IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLA 63

Query: 85  MELDVSSLASVRKFASEYNSQGRPLNILINNAG 117
              DV   A V  FA+   ++   +++L+NNAG
Sbjct: 64  ARCDVLDEADVAAFAAAVEARFGGVDMLVNNAG 96

Length = 265

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 61.5 bits (150), Expect = 6e-11
 Identities = 51/217 (23%), Positives = 90/217 (41%), Gaps = 33/217 (15%)

Query: 33  IVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREA-IVKEIPSAKVDAMELDVSS 91
           ++TG  SG G   A+ L   G  V+         K+   A  ++ + S ++  ++LDV+ 
Sbjct: 4   LITGCDSGFGNLLAKKLDSLGFTVLAGCLT----KNGPGAKELRRVCSDRLRTLQLDVTK 59

Query: 92  LASVRKFASEYNS--QGRPLNILINNAGIMASP---FMLSKDNIELQFATNHLGHFLLTH 146
              +++ A         + L  L+NNAGI+       +L  D+       N  G   +T 
Sbjct: 60  PEQIKRAAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLPMDDYRKCMEVNLFGTVEVTK 119

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI 206
             L  +++     ++ GR+VNVSS   R  +  G               GAY  SK A  
Sbjct: 120 AFLPLLRR-----AK-GRVVNVSSMGGRVPFPAG---------------GAYCASKAAVE 158

Query: 207 LHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI 243
             +  L + L+  GV ++   + PG+  T +   + +
Sbjct: 159 AFSDSLRRELQPWGVKVSI--IEPGNFKTGITGNSEL 193

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 60.9 bits (148), Expect = 7e-11
 Identities = 57/211 (27%), Positives = 88/211 (41%), Gaps = 36/211 (17%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAK-VDAME 86
            G  A++T A+ GIG   A   A  G +VI          D+ E  +KE+     +    
Sbjct: 1   DGKVALITAAAQGIGRAIALAFAREGANVIAT--------DINEEKLKELERGPGITTRV 52

Query: 87  LDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFA--TNHLGHFLL 144
           LDV+    V   A E   +GR +++L N AG +    +L  ++ +  FA   N    +L+
Sbjct: 53  LDVTDKEQVAALAKE---EGR-IDVLFNCAGFVHHGSILDCEDDDWDFAMNLNVRSMYLM 108

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
              +L  M   A+K    G I+N+SS A         RF              Y  +K A
Sbjct: 109 IKAVLPKM--LARKD---GSIINMSSVASSIKGVPN-RF-------------VYSTTKAA 149

Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSIVT 235
            I   K +A    + G  I  N++ PG++ T
Sbjct: 150 VIGLTKSVAADFAQQG--IRCNAICPGTVDT 178

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 60.8 bits (148), Expect = 8e-11
 Identities = 65/219 (29%), Positives = 96/219 (43%), Gaps = 48/219 (21%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIM-----AVRNMAAGKDVREAIVKEIPSA--K 81
           G   +VTGA  G+G   A   A RG  V++       +         + +V EI +A  K
Sbjct: 5   GRVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAAGGK 64

Query: 82  VDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIM--ASPFMLSKDNIELQFATNHL 139
             A    V     + K A +  + GR ++IL+NNAGI+   S   +S+++ +L    +  
Sbjct: 65  AVANYDSVEDGEKIVKTAID--AFGR-VDILVNNAGILRDRSFAKMSEEDWDLVMRVHLK 121

Query: 140 GHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGA-- 197
           G F +T      M+K  QK    GRI+N SS A       G+          Y +FG   
Sbjct: 122 GSFKVTRAAWPYMRK--QKF---GRIINTSSAA-------GL----------YGNFGQAN 159

Query: 198 YGQSK-----LANILHAKELAKHLKEDGVNITANSLHPG 231
           Y  +K     L+N L A E AK+      NIT N++ P 
Sbjct: 160 YSAAKLGLLGLSNTL-AIEGAKY------NITCNTIAPA 191

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 61.2 bits (149), Expect = 8e-11
 Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 33/176 (18%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPS--AKV-DAMELD 88
             VTGA+SGIG  TA  LA +G  + +  R+ A G       V +  +    V +   LD
Sbjct: 3   CFVTGAASGIGRATALRLAAQGAELFLTDRD-ADG---LAQTVADARALGGTVPEHRALD 58

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIMA--SPFMLSKDNIELQFATNHLG--HFLL 144
           +S   +V  FA++ ++    +++++N AGI A  +   L+ +        N +G  H   
Sbjct: 59  ISDYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIH--- 115

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRF------AY----------SEGIRFD 184
              +++T       + R G +VNVSS A         AY          SE +RFD
Sbjct: 116 ---VIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRGLSEVLRFD 168

Length = 272

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 61.2 bits (149), Expect = 8e-11
 Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 13/143 (9%)

Query: 34  VTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDA--MELDVSS 91
           +TGA+SG+G   A   A  G  + +A  N   G    E  +K +  A  D      DV  
Sbjct: 5   ITGAASGLGRAIALRWAREGWRLALADVNEEGG----EETLKLLREAGGDGFYQRCDVRD 60

Query: 92  LASVRKFASEYNSQGRPLNILINNAGIMASPFM--LSKDNIELQFATNHLGHFLLTHLLL 149
            + +   A     +   +++++NNAG+ +  F   LS ++ + Q A N +G        L
Sbjct: 61  YSQLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFL 120

Query: 150 DTMKKTAQKSSREGRIVNVSSEA 172
              K+      + GRIVN++S A
Sbjct: 121 PLFKR-----QKSGRIVNIASMA 138

Length = 270

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 60.7 bits (148), Expect = 1e-10
 Identities = 42/146 (28%), Positives = 62/146 (42%), Gaps = 23/146 (15%)

Query: 33  IVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIP-SAKVDAMELDVSS 91
           ++TGAS GIG   A  LA  G  +++  RN        EA+   +P   +   +  D++S
Sbjct: 9   LLTGASGGIGQALAEALAAAGARLLLVGRNAEK----LEALAARLPYPGRHRWVVADLTS 64

Query: 92  ---LASVRKFASEYNSQGRPLNILINNAGIMASPFML----SKDNIELQFATNHLGHFLL 144
                +V   A E       +N+LINNAG+  + F L      + IE   A N      L
Sbjct: 65  EAGREAVLARAREM----GGINVLINNAGV--NHFALLEDQDPEAIERLLALNLTAPMQL 118

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSS 170
           T  LL  ++           +VNV S
Sbjct: 119 TRALLPLLRA-----QPSAMVVNVGS 139

Length = 263

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 60.3 bits (146), Expect = 1e-10
 Identities = 57/208 (27%), Positives = 82/208 (39%), Gaps = 29/208 (13%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSS 91
           AIVTG ++GIG   A  LA  G  V++A       + V  AI +     +   +E +V+S
Sbjct: 2   AIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQA--GGQAIGLECNVTS 59

Query: 92  LASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFAT----NHLGHFLLTHL 147
              +        SQ   + IL+NNAG    P        E  F      N    F L+ L
Sbjct: 60  EQDLEAVVKATVSQFGGITILVNNAG-GGGPKPFDMPMTEEDFEWAFKLNLFSAFRLSQL 118

Query: 148 LLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANIL 207
               M+K     +  G I+N+SS                N         AYG SK A   
Sbjct: 119 CAPHMQK-----AGGGAILNISS------------MSSEN--KNVR-IAAYGSSKAAVNH 158

Query: 208 HAKELAKHLKEDGVNITANSLHPGSIVT 235
             + LA  L   G+ +  N++ PG++ T
Sbjct: 159 MTRNLAFDLGPKGIRV--NAVAPGAVKT 184

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 60.4 bits (146), Expect = 1e-10
 Identities = 67/220 (30%), Positives = 98/220 (44%), Gaps = 39/220 (17%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHV-IMAVRNMAAGKDVREAIVKEIPS--AKVDAM 85
           G  A+VTGAS GIG   A  LA  G  V I   RN  A  +     ++EI S   K   +
Sbjct: 6   GKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADET----IREIESNGGKAFLI 61

Query: 86  ELDVSSLASVRKFASEYNSQ------GRPLNILINNAGIMASPFM--LSKDNIELQFATN 137
           E D++S+  V+K   +  ++         ++IL+NNAGI     +   +++  +   A N
Sbjct: 62  EADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVN 121

Query: 138 HLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGA 197
               F L    L  ++        EGR++N+SS   R  ++  I               A
Sbjct: 122 IKAPFFLIQQTLPLLRA-------EGRVINISSAEVRLGFTGSI---------------A 159

Query: 198 YGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
           YG SK A       LAKHL E G  IT N++ PG   T++
Sbjct: 160 YGLSKGALNTMTLPLAKHLGERG--ITVNTIMPGYTKTDI 197

Length = 254

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 60.3 bits (146), Expect = 1e-10
 Identities = 60/212 (28%), Positives = 84/212 (39%), Gaps = 26/212 (12%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
             TAIVTG   GIG  T R  A  G  V +   N  A + V   I  +       A   D
Sbjct: 3   DKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAK--GGNAQAFACD 60

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGI-MASPFMLS-KDNIELQFATNHLGHFLLTH 146
           ++   SV    +       P+++L+NNAG     PF  +     E   A N  G   + H
Sbjct: 61  ITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHH 120

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI 206
            +L  M +        GRIVN++S+A R   S          E+ Y +    G    +  
Sbjct: 121 AVLPGMVE-----RGAGRIVNIASDAARVGSS---------GEAVY-AACKGGLVAFSKT 165

Query: 207 LHAKELAKHLKEDGVNITANSLHPGSIVTNLF 238
           + A+E A+H       IT N + PG   T L 
Sbjct: 166 M-AREHARH------GITVNVVCPGPTDTALL 190

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 61.4 bits (149), Expect = 1e-10
 Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 34/209 (16%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
              +TG + GIG   A   A  G  +++  R+    K + EA+  E  S +      D++
Sbjct: 271 VVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQA-----DIT 325

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKD----NIELQFATNHLGHFLLTH 146
             A+V    ++  ++   L++L+NNAG +A  F  S +    +    +  N  G F    
Sbjct: 326 DEAAVESAFAQIQARWGRLDVLVNNAG-IAEVFKPSLEQSAEDFTRVYDVNLSGAFA--- 381

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI 206
                 +  A+  S+ G IVN+ S               I    A     AY  SK A  
Sbjct: 382 ----CARAAARLMSQGGVIVNLGS---------------IASLLALPPRNAYCASKAAVT 422

Query: 207 LHAKELAKHLKEDGVNITANSLHPGSIVT 235
           + ++ LA      G  I  N++ PG I T
Sbjct: 423 MLSRSLACEWAPAG--IRVNTVAPGYIET 449

Length = 520

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 60.0 bits (145), Expect = 1e-10
 Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 29/213 (13%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPS--AKVDAME 86
           G  AIVTG + GIG      LA  G  V++   N  + K+  E +V E+      V A++
Sbjct: 6   GKVAIVTGGAKGIGKAITVALAQEGAKVVI---NYNSSKEAAENLVNELGKEGHDVYAVQ 62

Query: 87  LDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFM--LSKDNIELQFATNHLGHFLL 144
            DVS +    +   E  +    ++IL+NNAGI        L++++ E     N    F  
Sbjct: 63  ADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNT 122

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
           T  +L  + +     + EGRI+++SS        +   F + N          Y  +K  
Sbjct: 123 TSAVLPYITE-----AEEGRIISISS-----IIGQAGGFGQTN----------YSAAKAG 162

Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
            +   K LA  L +   N+T N++ PG I T +
Sbjct: 163 MLGFTKSLALELAK--TNVTVNAICPGFIDTEM 193

Length = 247

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 60.2 bits (146), Expect = 1e-10
 Identities = 61/213 (28%), Positives = 92/213 (43%), Gaps = 27/213 (12%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G  AIVTGA SGIG  TA++ A  G  V++A R+  A + V  AI       +  A + D
Sbjct: 5   GRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAA---GGRAFARQGD 61

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQ--FATNHLGHFLLTH 146
           V S  +V        ++   L++L+NNAG      +++ D  +       N  G FL   
Sbjct: 62  VGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAK 121

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI 206
             +  M++  Q     G IVN +S+         +        +AY +      SK A  
Sbjct: 122 YAIPIMQR--QGG---GSIVNTASQ---------LALAGGRGRAAYVA------SKGAIA 161

Query: 207 LHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
              + +A     DG  I  N++ PG+I T  FR
Sbjct: 162 SLTRAMALDHATDG--IRVNAVAPGTIDTPYFR 192

Length = 252

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 60.3 bits (146), Expect = 2e-10
 Identities = 66/213 (30%), Positives = 99/213 (46%), Gaps = 29/213 (13%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAME 86
           G TA+VTGA+SGIG E A  LA  G  V +A       +D   A+  EI  A  K   + 
Sbjct: 7   GKTAVVTGAASGIGKEIALELARAGAAVAIA----DLNQDGANAVADEINKAGGKAIGVA 62

Query: 87  LDVSSLASVRKFASEYNSQGRPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGHFLL 144
           +DV++  +V     +   +   ++IL++NAGI + +P    S  + +   A +  G FL 
Sbjct: 63  MDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLT 122

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
           T   L  M     K  R G ++ + S  H    S          +SAY +   +G   LA
Sbjct: 123 TKAALKHM----YKDDRGGVVIYMGS-VHSHEASPL--------KSAYVT-AKHGLLGLA 168

Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
            +L AKE AKH      N+ ++ + PG + T L
Sbjct: 169 RVL-AKEGAKH------NVRSHVVCPGFVRTPL 194

Length = 262

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 60.1 bits (146), Expect = 2e-10
 Identities = 61/219 (27%), Positives = 93/219 (42%), Gaps = 39/219 (17%)

Query: 28  TGLTAIVTGAS--SGIGTETARVLALRGVHV-----IMAVRNMAAGKDVREAIV--KEI- 77
               A+VTGAS  +GIG    R LA +G+ +         + M  G   +E ++  +EI 
Sbjct: 4   MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIE 63

Query: 78  -PSAKVDAMELDVS-SLASVRKFASEYNSQGRPLNILINNA--GIMASPFMLSKDNIELQ 133
               + + ME+D+S   A  R F +     G P +ILINNA          L+ + ++  
Sbjct: 64  SYGVRCEHMEIDLSQPYAPNRVFYAVSERLGDP-SILINNAAYSTHTRLEELTAEQLDKH 122

Query: 134 FATNHLGHFLLTHLLLDTMKKTAQKSSRE-GRIVNVSSEAHRFAYSEGIRFDKINDESAY 192
           +A N     LL+           Q   +  GRI+N++S         G     + DE AY
Sbjct: 123 YAVNVRATMLLSSAF------AKQYDGKAGGRIINLTS---------GQSLGPMPDELAY 167

Query: 193 NSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPG 231
               A  +  +      K LA  L E G  IT N+++PG
Sbjct: 168 ----AATKGAIEAF--TKSLAPELAEKG--ITVNAVNPG 198

Length = 256

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 60.0 bits (146), Expect = 2e-10
 Identities = 65/247 (26%), Positives = 105/247 (42%), Gaps = 36/247 (14%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G T ++TGA   IG+   + +   G  VI A  +  A  ++ E++ KE  S K+  +EL
Sbjct: 3   KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVEL 62

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNA-----GIMASPFMLSKDNIELQFATNHLG-H 141
           D++   S+ +F S+   +   ++  +N A           F +S D+      + HLG  
Sbjct: 63  DITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNE-NLSLHLGSS 121

Query: 142 FLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI---RFDKINDESAYNSFGAY 198
           FL +       KK        G +VN+SS         G+   +F+     S  +    Y
Sbjct: 122 FLFSQQFAKYFKKQGG-----GNLVNISS-------IYGVVAPKFEIYEGTSMTSPV-EY 168

Query: 199 GQSKLANILH-AKELAKHLKEDGVNITANSLHPGSIVTN-----LFRYNGILRGFCNTVG 252
              K A I+H  K LAK+ K+  + +  N + PG I+ N     L  Y    +  CN  G
Sbjct: 169 AAIK-AGIIHLTKYLAKYFKDSNIRV--NCVSPGGILDNQPEAFLNAY----KKCCNGKG 221

Query: 253 KLVLKNI 259
            L   +I
Sbjct: 222 MLDPDDI 228

Length = 256

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 60.0 bits (146), Expect = 2e-10
 Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 23/156 (14%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVRE----AIVKEIPS--AKV 82
           G  A++TGA+SG G   AR+ A  G+ +++A        DV++      V E+ +  A+V
Sbjct: 6   GKVAVITGAASGFGLAFARIGAALGMKLVLA--------DVQQDALDRAVAELRAQGAEV 57

Query: 83  DAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQ--FATNHLG 140
             +  DVS  A V   A     +   +++L NNAG+ A   +      + +     N  G
Sbjct: 58  LGVRTDVSDAAQVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWG 117

Query: 141 HF----LLTHLLLDTMKKTAQKSSREGRIVNVSSEA 172
                   T L+L   +K     + EG IVN +S A
Sbjct: 118 VIHGVRAFTPLMLAAAEKDP---AYEGHIVNTASMA 150

Length = 287

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 59.1 bits (143), Expect = 3e-10
 Identities = 55/207 (26%), Positives = 85/207 (41%), Gaps = 26/207 (12%)

Query: 33  IVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEI-PSAKVDAMELDVSS 91
           +VTGAS GIG E A   A  G  VI+  RN    + V + I +E     +   ++L   +
Sbjct: 8   LVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFILDLLTCT 67

Query: 92  LASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQ---FATNHLGHFLLTHLL 148
             + ++ A         L+ +++NAG++     LS+ N ++       N    F+LT  L
Sbjct: 68  SENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNVNATFMLTQAL 127

Query: 149 LDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILH 208
           L  + K     S  G +V  SS   R                A   +GAY  SK A    
Sbjct: 128 LPLLLK-----SDAGSLVFTSSSVGR-------------QGRAN--WGAYAVSKFATEGL 167

Query: 209 AKELAKHLKEDGVNITANSLHPGSIVT 235
            + LA   +    N+  N ++PG   T
Sbjct: 168 XQVLADEYQ--QRNLRVNCINPGGTRT 192

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 59.0 bits (143), Expect = 3e-10
 Identities = 55/214 (25%), Positives = 89/214 (41%), Gaps = 37/214 (17%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVR-NMAAGKDVREAIVKEIPSAKVDAMELDVS 90
           A+VTG   GIGT   + LA  G  V      N    +   +   +         +E DVS
Sbjct: 3   ALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQE--QGALGFDFRVVEGDVS 60

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGIMASPFM--LSKDNIELQFATNHLGHFLLTHLL 148
           S  S +   ++  ++  P+++L+NNAGI        ++ +       TN    F +T  +
Sbjct: 61  SFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPV 120

Query: 149 LDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQ-----SKL 203
           +D M++        GRI+N+SS               +N +      G +GQ     +K 
Sbjct: 121 IDGMRERGW-----GRIINISS---------------VNGQK-----GQFGQTNYSAAKA 155

Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
             I   K LA+     GV  T N++ PG I T++
Sbjct: 156 GMIGFTKALAQEGATKGV--TVNTISPGYIATDM 187

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 58.8 bits (143), Expect = 4e-10
 Identities = 60/225 (26%), Positives = 95/225 (42%), Gaps = 45/225 (20%)

Query: 21  VTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA 80
           V +  D +G TA+VTG S G+G + A  L   G  V+++ R     ++        + + 
Sbjct: 4   VLELFDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAA----HLEAL 59

Query: 81  KVDAMEL--DVSSLASVRKFASEYNSQGRPLNILINNAGIMAS--------PFMLSKDNI 130
            +DA+ +  DV+  A + + A E   +   ++IL+NNAG  A+        P       +
Sbjct: 60  GIDALWIAADVADEADIERLAEETLERFGHVDILVNNAG--ATWGAPAEDHPVEAWDKVM 117

Query: 131 ELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDES 190
            L    N  G FLL+      + K +      GRI+NV+S A       G+     N   
Sbjct: 118 NL----NVRGLFLLSQ----AVAKRSMIPRGYGRIINVASVA-------GL---GGNPPE 159

Query: 191 AYNSFGAYGQSKLANILHAKELA----KHLKEDGVNITANSLHPG 231
             ++  AY  SK A I   + LA     H       I  N++ PG
Sbjct: 160 VMDTI-AYNTSKGAVINFTRALAAEWGPH------GIRVNAIAPG 197

Length = 259

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 59.0 bits (143), Expect = 4e-10
 Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 37/211 (17%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
           TA+VTGA+ GIG   AR     G  V+    + AA      A    +  A+   +  D++
Sbjct: 4   TALVTGAAGGIGQALARRFLAAGDRVLALDIDAAAL----AAFADALGDARFVPVACDLT 59

Query: 91  SLASVR-KFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHL---GHFLLTH 146
             AS+    A+    +G P+++L+ NAG  A    L         A N L     +L   
Sbjct: 60  DAASLAAALANAAAERG-PVDVLVANAG-AARAASLHDTTPASWRADNALNLEAAYLCVE 117

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFG--AYGQSKLA 204
            +L+ M K ++     G +VN+ S               +N      + G  AY  +K  
Sbjct: 118 AVLEGMLKRSR-----GAVVNIGS---------------VN---GMAALGHPAYSAAKAG 154

Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSIVT 235
            I + K LA      G  I AN++ PG++ T
Sbjct: 155 LIHYTKLLAVEYGRFG--IRANAVAPGTVKT 183

Length = 257

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 58.5 bits (142), Expect = 7e-10
 Identities = 54/208 (25%), Positives = 87/208 (41%), Gaps = 31/208 (14%)

Query: 34  VTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLA 93
           +TGAS G G         RG  V+   R+ A   D    + ++     +  + LDV+  A
Sbjct: 8   ITGASRGFGRAWTEAALERGDRVVATARDTATLAD----LAEKYGDR-LLPLALDVTDRA 62

Query: 94  SVRKFASEYNSQ-GRPLNILINNAGIMASPFM--LSKDNIELQFATNHLGHFLLTHLLLD 150
           +V           GR L+I++NNAG      +  +++     Q  TN  G   +T  +L 
Sbjct: 63  AVFAAVETAVEHFGR-LDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLP 121

Query: 151 TMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAK 210
            ++   Q+S   G I+ +SS         GI        SA+   G Y  SK A    ++
Sbjct: 122 YLR--EQRS---GHIIQISSIG-------GI--------SAFPMSGIYHASKWALEGMSE 161

Query: 211 ELAKHLKEDGVNITANSLHPGSIVTNLF 238
            LA+ + E G+ +T   + PG   T+  
Sbjct: 162 ALAQEVAEFGIKVTL--VEPGGYSTDWA 187

Length = 275

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 58.3 bits (141), Expect = 7e-10
 Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 13/147 (8%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEI--PSAKVDAMELD 88
            A+VTGA+SGIG   AR L   G+ V +  R     + +    VKE+     + D    D
Sbjct: 5   VALVTGATSGIGLAIARRLGKEGLRVFVCARG---EEGLATT-VKELREAGVEADGRTCD 60

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQF---ATNHLGHFLLT 145
           V S+  +    +   ++  P+++L+NNAG           + EL      TN  G F +T
Sbjct: 61  VRSVPEIEALVAAAVARYGPIDVLVNNAGRSGGGATAELAD-ELWLDVVETNLTGVFRVT 119

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEA 172
             +L   K         GRI+N++S  
Sbjct: 120 KEVL---KAGGMLERGTGRIINIASTG 143

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 57.9 bits (140), Expect = 9e-10
 Identities = 55/214 (25%), Positives = 87/214 (40%), Gaps = 22/214 (10%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G   +VTG S GIG   A+     G  VI++ R   A  D  E +       +  A+  D
Sbjct: 6   GKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSA---YGECIAIPAD 62

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIM--ASPFMLSKDNIELQFATNHLGHFLLTH 146
           +SS   +    +    +   L++L+NNAG    A      +   +     N    F LT 
Sbjct: 63  LSSEEGIEALVARVAERSDRLDVLVNNAGATWGAPLEAFPESGWDKVMDINVKSVFFLTQ 122

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI 206
            LL  ++  A  +    R++N+ S A       GI          Y    +YG SK A  
Sbjct: 123 ALLPLLRAAAT-AENPARVINIGSIA-------GIVVSG---LENY----SYGASKAAVH 167

Query: 207 LHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY 240
              ++LAK L  +  +IT N++ PG   + +  +
Sbjct: 168 QLTRKLAKELAGE--HITVNAIAPGRFPSKMTAF 199

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 57.3 bits (139), Expect = 1e-09
 Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 39/208 (18%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
           TA++TGAS GIG   AR LA     +++  R      ++      E+P A      +D++
Sbjct: 5   TALITGASRGIGAAIARELA-PTHTLLLGGRPAERLDELAA----ELPGAT--PFPVDLT 57

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGI--MASPFMLSKDNIELQFATNHLGHFLLTHLL 148
              ++   A+     GR L++L++NAG+  +      + D        N +    LT LL
Sbjct: 58  DPEAI---AAAVEQLGR-LDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLL 113

Query: 149 LDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILH 208
           L  ++      +  G +V ++S A       G+R        A   +G+Y  SK A    
Sbjct: 114 LPALR------AAHGHVVFINSGA-------GLR--------ANPGWGSYAASKFA---- 148

Query: 209 AKELAKHLKED-GVNITANSLHPGSIVT 235
            + LA  L+E+   N+   S+HPG   T
Sbjct: 149 LRALADALREEEPGNVRVTSVHPGRTDT 176

Length = 227

>gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase

 Score = 57.6 bits (139), Expect = 1e-09
 Identities = 39/155 (25%), Positives = 64/155 (41%), Gaps = 22/155 (14%)

Query: 32  AIVTGASSGIGTETARVLALR----GVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            +VTGAS G G   A+ LA      G  ++++ RN  A + ++  I  E    +V  + L
Sbjct: 3   CLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSL 62

Query: 88  DVSSLASVRKFASEYNSQGRPLN----ILINNAGIMASPFMLSK--------DNIELQFA 135
           D+ + A + +         RP      +LINNAG +     +SK          ++  +A
Sbjct: 63  DLGAEAGLEQLLKALRELPRPKGLQRLLLINNAGTLGD---VSKGFVDLSDSTQVQNYWA 119

Query: 136 TNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSS 170
            N      LT  +   +K           +VN+SS
Sbjct: 120 LNLTSMLCLTSSV---LKAFKDSPGLNRTVVNISS 151

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 57.4 bits (139), Expect = 1e-09
 Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 5/93 (5%)

Query: 26  DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVD 83
           D  G TA+VTG+S GIG +TA++LA  G HV++  R  A        +V EI +A  +  
Sbjct: 3   DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRA---NKVVAEIEAAGGRAS 59

Query: 84  AMELDVSSLASVRKFASEYNSQGRPLNILINNA 116
           A+  D++   SV         +   L+ L+ NA
Sbjct: 60  AVGADLTDEESVAALMDTAREEFGGLDALVLNA 92

Length = 248

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 57.3 bits (139), Expect = 1e-09
 Identities = 60/216 (27%), Positives = 84/216 (38%), Gaps = 48/216 (22%)

Query: 26  DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVD-- 83
           +    T ++TGA+SGIG   AR    +G  V         G D      ++ P    +  
Sbjct: 2   EFMTKTVLITGAASGIGLAQARAFLAQGAQVY--------GVD-----KQDKPDLSGNFH 48

Query: 84  AMELDVSS-LASVRKFASEYNSQGRPLNILINNAGIM-ASPFMLSKDNIELQ--FATNHL 139
            ++LD+S  L  +  +           +IL N AGI+     +L     E Q  F TN  
Sbjct: 49  FLQLDLSDDLEPLFDWVPSV-------DILCNTAGILDDYKPLLDTSLEEWQHIFDTNLT 101

Query: 140 GHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYG 199
             FLLT   L  M    +KS   G I+N+ S A   A   G                AY 
Sbjct: 102 STFLLTRAYLPQML--ERKS---GIIINMCSIASFVAGGGGA---------------AYT 141

Query: 200 QSKLANILHAKELAKHLKEDGVNITANSLHPGSIVT 235
            SK A     K+LA    +DG  I    + PG++ T
Sbjct: 142 ASKHALAGFTKQLALDYAKDG--IQVFGIAPGAVKT 175

Length = 235

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 57.6 bits (140), Expect = 1e-09
 Identities = 59/214 (27%), Positives = 89/214 (41%), Gaps = 41/214 (19%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
           T ++TG SSG G   A+     G  V+  VR+ AA    R       P  +  A  LDV+
Sbjct: 6   TWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAA----RADFEALHP-DRALARLLDVT 60

Query: 91  SLASVRKFASEYNSQGRPLNILINNAG------IMASPFMLSKDNIELQFATNHLGHFLL 144
              ++    ++  +   P+++L+NNAG      I  SP       +  QF  N  G   +
Sbjct: 61  DFDAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPL----AEMRRQFEVNVFGAVAM 116

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
           T  +L  M+       R G IVN++S         G+              G Y  SK A
Sbjct: 117 TKAVLPGMRA-----RRRGHIVNITSMG-------GLI--------TMPGIGYYCGSKFA 156

Query: 205 --NILHAKELAKHLKEDGVNITANSLHPGSIVTN 236
              I  +  LAK +   G+++TA  + PGS  T+
Sbjct: 157 LEGISES--LAKEVAPFGIHVTA--VEPGSFRTD 186

Length = 277

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 56.9 bits (137), Expect = 2e-09
 Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 11/148 (7%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G TA++TG++ GIG   A+     G  V +A  N+ A +    A   EI  A   A+ LD
Sbjct: 3   GKTALITGSARGIGRAFAQAYVREGARVAIADINLEAAR----ATAAEIGPAAC-AISLD 57

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGI--MASPFMLSKDNIELQFATNHLGHFLLTH 146
           V+  AS+ +  +    +   ++IL+NNA +  +A    +++++ +  FA N  G   +  
Sbjct: 58  VTDQASIDRCVAALVDRWGSIDILVNNAALFDLAPIVDITRESYDRLFAINVSGTLFMMQ 117

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEAHR 174
            +   M   AQ   R G+I+N++S+A R
Sbjct: 118 AVARAM--IAQ--GRGGKIINMASQAGR 141

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 56.8 bits (137), Expect = 2e-09
 Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 25/206 (12%)

Query: 33  IVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSL 92
           ++TG  SG+G  TA  LA  G  + +   N    +  + A+++  P A+V  ++ DVS  
Sbjct: 7   LITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIKADVSDE 66

Query: 93  ASVRKFASEYNSQGRPLNILINNAGI---MASPFMLSKDNIELQFATNHLGHFLLTHLLL 149
           A V  +      Q   ++   NNAGI            D  +   + N  G F     +L
Sbjct: 67  AQVEAYVDATVEQFGRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRGVFYGLEKVL 126

Query: 150 DTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHA 209
             M++  Q S   G IVN +S         GIR   + ++S Y +      +K   +   
Sbjct: 127 KVMRE--QGS---GMIVNTASVG-------GIR--GVGNQSGYAA------AKHGVVGLT 166

Query: 210 KELAKHLKEDGVNITANSLHPGSIVT 235
           +  A    + G+ I  N++ PG+I+T
Sbjct: 167 RNSAVEYGQYGIRI--NAIAPGAILT 190

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 56.7 bits (137), Expect = 2e-09
 Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 27/210 (12%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G  A+VTGA++G+G   A  LA  G  ++ A    +   + ++ +       +  ++  D
Sbjct: 5   GKVALVTGANTGLGQGIAVGLAEAGADIVGA--GRSEPSETQQQVEAL--GRRFLSLTAD 60

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIM--ASPFMLSKDNIELQFATNHLGHFLLTH 146
           +S + +++        +   ++IL+NNAGI+  A     S+ + +     N    F LT 
Sbjct: 61  LSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQ 120

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI 206
                  K   K  R G+I+N++S     ++  GIR              +Y  SK A  
Sbjct: 121 ----AAAKHFLKQGRGGKIINIAS---MLSFQGGIRVP------------SYTASKHAVA 161

Query: 207 LHAKELAKHLKEDGVNITANSLHPGSIVTN 236
              K LA      G+N+  N++ PG + TN
Sbjct: 162 GLTKLLANEWAAKGINV--NAIAPGYMATN 189

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 56.5 bits (137), Expect = 2e-09
 Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 10/147 (6%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAI--VKEIPSAKVDAMELD 88
            A+VTG   GIG   AR LA  G  +  A+ +    +++      ++ +   +V     D
Sbjct: 4   VALVTGGRRGIGLGIARALAAAGFDL--AINDRPDDEELAATQQELRALG-VEVIFFPAD 60

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIMASP----FMLSKDNIELQFATNHLGHFLL 144
           V+ L++         +    ++ L+NNAG+          L+ ++ +   A N  G F L
Sbjct: 61  VADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFL 120

Query: 145 THLLLDTM-KKTAQKSSREGRIVNVSS 170
           T  +   M  +   +      IV VSS
Sbjct: 121 TQAVAKRMLAQPEPEELPHRSIVFVSS 147

Length = 256

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 56.5 bits (137), Expect = 2e-09
 Identities = 53/212 (25%), Positives = 85/212 (40%), Gaps = 31/212 (14%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G TA++TG +SGIG ETAR     G  V +  R+ A+ +  R  +           +  D
Sbjct: 6   GKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL-----GESALVIRAD 60

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGI-MASPFML-SKDNIELQFATNHLGHFLLTH 146
              +A+ +  A         L+ +  NAG+   +P     +   +  F TN  G + L  
Sbjct: 61  AGDVAAQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQ 120

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI 206
            LL  +   A        ++N S  AH            I   ++      Y  SK A +
Sbjct: 121 ALLPLLANPASI------VLNGSINAH------------IGMPNS----SVYAASKAALL 158

Query: 207 LHAKELAKHLKEDGVNITANSLHPGSIVTNLF 238
             AK L+  L   G+ +  N++ PG + T L+
Sbjct: 159 SLAKTLSGELLPRGIRV--NAVSPGPVQTPLY 188

Length = 249

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 56.1 bits (136), Expect = 4e-09
 Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 7/92 (7%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEI---PSAKVDAM 85
           G  A +TG  +GIG   A+  A  G  V +A R      +V EA  +EI      +   +
Sbjct: 3   GKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKP----EVLEAAAEEISSATGGRAHPI 58

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAG 117
           + DV    +V     E   +   ++ILINNA 
Sbjct: 59  QCDVRDPEAVEAAVDETLKEFGKIDILINNAA 90

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 55.6 bits (135), Expect = 4e-09
 Identities = 56/214 (26%), Positives = 85/214 (39%), Gaps = 38/214 (17%)

Query: 34  VTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKE-IPSAKVDAMELDVSSL 92
           VTGA  GIG E A   A  G  VI+  R     + V + I     P   +  ++L  ++ 
Sbjct: 17  VTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATP 76

Query: 93  ASVRKFASEYNSQ-GRPLNILINNAGIMA--SPF-MLSKDNIELQFATNHLGHFLLTHLL 148
            + ++ A     Q GR L+ +++NAG++    P      +  +     N    F+LT  L
Sbjct: 77  QNYQQLADTIEEQFGR-LDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQAL 135

Query: 149 LDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA---- 204
           L  + K     S    +V  SS   R    +G          A   +GAY  SK A    
Sbjct: 136 LPLLLK-----SPAASLVFTSSSVGR----QG---------RAN--WGAYAVSKFATEGM 175

Query: 205 -NILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
             +L A E        G N+  N ++PG   T +
Sbjct: 176 MQVL-ADEY------QGTNLRVNCINPGGTRTAM 202

Length = 247

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 55.9 bits (135), Expect = 5e-09
 Identities = 53/209 (25%), Positives = 84/209 (40%), Gaps = 30/209 (14%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAME--LD 88
            A+V GASSGIG  TA  LA  G  V +  R +    +  E +V +I +   +A+   LD
Sbjct: 12  PALVAGASSGIGAATAIELAAAGFPVALGARRV----EKCEELVDKIRADGGEAVAFPLD 67

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGHFLLTH 146
           V+   SV+ F ++       + +L++ AG         +S +  E Q   + +G   L  
Sbjct: 68  VTDPDSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLAT 127

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI 206
            +L  M        R G ++ V S+                        GAYG +K    
Sbjct: 128 AVLPGM-----IERRRGDLIFVGSDVALRQRPH---------------MGAYGAAKAGLE 167

Query: 207 LHAKELAKHLKEDGVNITANSLHPGSIVT 235
                L   L  +G  + A+ +HPG  +T
Sbjct: 168 AMVTNLQMEL--EGTGVRASIVHPGPTLT 194

Length = 274

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 55.5 bits (134), Expect = 5e-09
 Identities = 54/215 (25%), Positives = 88/215 (40%), Gaps = 34/215 (15%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSS 91
            I+TG S G+G   A  L  +G HVI   R     ++     + E  ++ +    LD+  
Sbjct: 4   VIITGTSQGLGEAIANQLLEKGTHVISISR----TENKELTKLAEQYNSNLTFHSLDLQD 59

Query: 92  LASVRKFASEYNSQGRPLNI----LINNAGIMA--SPF-MLSKDNIELQFATNHLGHFLL 144
           +  +    +E  S  +  N+    LINNAG++A   P      + +      N L   +L
Sbjct: 60  VHELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMIL 119

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
           T      MK T      + R++N+SS A +               + Y  + AY  SK  
Sbjct: 120 TSTF---MKHTKDWKV-DKRVINISSGAAK---------------NPYFGWSAYCSSKAG 160

Query: 205 NILHAKELA--KHLKEDGVNITANSLHPGSIVTNL 237
             +  + +A  +  +E  V I A S  PG + TN+
Sbjct: 161 LDMFTQTVATEQEEEEYPVKIVAFS--PGVMDTNM 193

Length = 251

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 55.1 bits (133), Expect = 6e-09
 Identities = 59/216 (27%), Positives = 87/216 (40%), Gaps = 49/216 (22%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
           T +VTGA+ GIG   +  LA  G  VI   R+               P    +    D++
Sbjct: 5   TVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD----------FPG---ELFACDLA 51

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQ-----FATNHLGHFLLT 145
            +       ++ N    P++ ++NN GI A P  L K  I+L      +  N      +T
Sbjct: 52  DIEQTAATLAQINEIH-PVDAIVNNVGI-ALPQPLGK--IDLAALQDVYDLNVRAAVQVT 107

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
              L+ MK        +GRIVN+ S A   A           D ++Y    +  +S L  
Sbjct: 108 QAFLEGMKL-----REQGRIVNICSRAIFGAL----------DRTSY----SAAKSALVG 148

Query: 206 ILH--AKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
                A ELA++       IT N++ PG I T LFR
Sbjct: 149 CTRTWALELAEY------GITVNAVAPGPIETELFR 178

Length = 234

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 55.7 bits (135), Expect = 6e-09
 Identities = 42/143 (29%), Positives = 60/143 (41%), Gaps = 18/143 (12%)

Query: 34  VTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLA 93
           +TGA+SGIG  TA + A  G  V     N A    +      E+ +       LDV+  A
Sbjct: 6   ITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALA----AELGAGNAWTGALDVTDRA 61

Query: 94  SVRK----FASEYNSQGRPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGHFLLTHL 147
           +       FA+   + GR L++L NNAGI    PF  +  +  +     N  G     H 
Sbjct: 62  AWDAALADFAAA--TGGR-LDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHA 118

Query: 148 LLDTMKKTAQKSSREGRIVNVSS 170
            L  +K T        R++N SS
Sbjct: 119 ALPYLKATP-----GARVINTSS 136

Length = 260

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 55.2 bits (133), Expect = 8e-09
 Identities = 58/211 (27%), Positives = 87/211 (41%), Gaps = 28/211 (13%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
               A+VTGA  G+G   A   A  G  V++A R  +   +V E I      A V A   
Sbjct: 9   DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAA-- 66

Query: 88  DVSSLASVRKFASE-YNSQGRPLNILINN-AGIMASPFM-LSKDNIELQFATNHLGHFLL 144
           D++   +    A +   + GR L+I++NN  G M +P +  S  ++   F  N      L
Sbjct: 67  DLAHPEATAGLAGQAVEAFGR-LDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHAL 125

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
           T   +  M +     S  G ++N+SS   R                A   F AYG +K A
Sbjct: 126 TVAAVPLMLEH----SGGGSVINISSTMGRL---------------AGRGFAAYGTAKAA 166

Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSIVT 235
              + +  A  L      I  N++ PGSI+T
Sbjct: 167 LAHYTRLAALDLCP---RIRVNAIAPGSILT 194

Length = 263

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 56.0 bits (135), Expect = 9e-09
 Identities = 54/216 (25%), Positives = 89/216 (41%), Gaps = 32/216 (14%)

Query: 27  GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAME 86
                 +VTGA+ GIG    +  A  G  V++A RN+   ++  +++          A+ 
Sbjct: 3   AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL-----GPDHHALA 57

Query: 87  LDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFM-----LSKDNIELQFATNHLGH 141
           +DVS  A +R+   + + +   +++L+NNAG+   P M      + +      A N  G 
Sbjct: 58  MDVSDEAQIREGFEQLHREFGRIDVLVNNAGV-TDPTMTATLDTTLEEFARLQAINLTGA 116

Query: 142 FLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQS 201
           +L+    L  M    Q       IVNV+S A       G+         A     AY  S
Sbjct: 117 YLVAREALRLM--IEQG--HGAAIVNVASGA-------GLV--------ALPKRTAYSAS 157

Query: 202 KLANILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
           K A I   + LA      G+ + A  + PG + T +
Sbjct: 158 KAAVISLTRSLACEWAAKGIRVNA--VLPGYVRTQM 191

Length = 520

>gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional

 Score = 54.2 bits (131), Expect = 1e-08
 Identities = 53/214 (24%), Positives = 81/214 (37%), Gaps = 39/214 (18%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSS 91
           AIVTG S G+G   A  L   G+ V+   R+       R   +      ++  +ELD+S 
Sbjct: 4   AIVTGHSRGLGAALAEQLLQPGIAVLGVARS-------RHPSLAAAAGERLAEVELDLSD 56

Query: 92  LASVRKFASEYNSQ----GRPLNILINNAGI---MASPFMLSKDNIELQFATNHLGHFLL 144
            A+   + +         G    +LINNAG    +     L    I      N     +L
Sbjct: 57  AAAAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLML 116

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
           T  L       A++     RI+++SS A R AY+                +  Y  +K A
Sbjct: 117 TAALAQAASDAAER-----RILHISSGAARNAYA---------------GWSVYCATKAA 156

Query: 205 NILHAKELAKHLKEDGVN-ITANSLHPGSIVTNL 237
              HA+ +A     D    +   SL PG + T +
Sbjct: 157 LDHHARAVA----LDANRALRIVSLAPGVVDTGM 186

Length = 243

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 54.4 bits (131), Expect = 1e-08
 Identities = 58/215 (26%), Positives = 89/215 (41%), Gaps = 33/215 (15%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAMELD 88
            A+VTG + GIG   A  LA  G  V +A  N    K+      KEI  A  K  A +LD
Sbjct: 2   VALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKET----AKEINQAGGKAVAYKLD 57

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIMAS-PFM-LSKDNIELQFATNHLGHFLLTH 146
           VS    V     +   +    ++++NNAG+    P + ++++ ++  +  N  G      
Sbjct: 58  VSDKDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQ 117

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNS--FGAYGQSKLA 204
                 KK        G+I+N +S A                 SAY+S  F   G ++ A
Sbjct: 118 AAARQFKKQGHG----GKIINAASIAGHEGNPI---------LSAYSSTKFAVRGLTQTA 164

Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
               A+ELA      G  IT N+  PG + T ++ 
Sbjct: 165 ----AQELAP----KG--ITVNAYCPGIVKTPMWE 189

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 54.1 bits (130), Expect = 2e-08
 Identities = 56/209 (26%), Positives = 89/209 (42%), Gaps = 25/209 (11%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G  AI+TGA +GIG E A   A  G  V+++  N  A   V + I +     +  A   D
Sbjct: 11  GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCD 68

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIMA-SPFMLSKDNIELQFATNHLGHFLLTHL 147
           ++S   +   A    S+   ++IL+NNAG     PF +   +    +  N    F L+ L
Sbjct: 69  ITSEQELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQL 128

Query: 148 LLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANIL 207
           +   M+K        G I+ ++S A                E+   +  +Y  SK A   
Sbjct: 129 VAPEMEKNGG-----GVILTITSMA---------------AENKNINMTSYASSKAAASH 168

Query: 208 HAKELAKHLKEDGVNITANSLHPGSIVTN 236
             + +A  L E   NI  N + PG+I+T+
Sbjct: 169 LVRNMAFDLGEK--NIRVNGIAPGAILTD 195

Length = 255

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 54.4 bits (131), Expect = 2e-08
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 16/151 (10%)

Query: 31  TAIVTGASSGIGTE-TARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDV 89
           T  +TGASSG G   T R+LA RG  V   VR   A  D++          ++  ++LDV
Sbjct: 4   TWFITGASSGFGRGMTERLLA-RGDRVAATVRRPDALDDLKARY-----GDRLWVLQLDV 57

Query: 90  SSLASVRK-FASEYNSQGRPLNILINNAG--IMASPFMLSKDNIELQFATNHLGHFLLTH 146
           +  A+VR      + + GR ++++++NAG  +  +   LS   I  Q  TN +G   +  
Sbjct: 58  TDSAAVRAVVDRAFAALGR-IDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIR 116

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEAHRFAY 177
             L  +++        GRIV VSSE  + AY
Sbjct: 117 AALPHLRR-----QGGGRIVQVSSEGGQIAY 142

Length = 276

>gnl|CDD|187633 cd08928, KR_fFAS_like_SDR_c_like, ketoacyl reductase (KR) domain of fungal-type fatty acid synthase (fFAS)-like, classical (c)-like SDRs

 Score = 53.8 bits (129), Expect = 2e-08
 Identities = 36/212 (16%), Positives = 64/212 (30%), Gaps = 21/212 (9%)

Query: 32  AIVTGASSG-IGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
            ++TGA  G IG E  + L   G  V +     +         +     A    + +   
Sbjct: 1   VLITGAGDGSIGAEVLQGLLNGGAKVYVTTSRFSRQVTKYYQDIYAACGAAGSVLIVVPF 60

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDN---IELQFATNHLGHFLLTHL 147
           +  S +   +        +N L      +  PF    +    I    + + + H ++   
Sbjct: 61  NQGSKQDVEALAIGIYDTVNGLGW-DLDLYGPFAAIPETGIEIPAIDSKSEVAHRIMLTN 119

Query: 148 LLDTMKKTAQKSSREGRIVNVSSEAHRF--AYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
           LL           R   +V +  +        ++ I     N    +   GAY +SKL  
Sbjct: 120 LL-----------RPKGLVKIQKQLRGQETRPAQVILPFSPN-HGTFGDDGAYSESKLHL 167

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
                  A      G ++T    H G     L
Sbjct: 168 ETLFNRWASESW--GNDLTVCGAHIGWTRGTL 197

KR domain of FAS, including the fungal-type multidomain FAS alpha chain, and the single domain daunorubicin C-13 ketoreductase. Fungal-type FAS is a heterododecameric FAS composed of alpha and beta multifunctional polypeptide chains. The KR, an SDR family member is located centrally in the alpha chain. KR catalyzes the NADP-dependent reduction of ketoacyl-ACP to hydroxyacyl-ACP. KR shares the critical active site Tyr of the classical SDR and has partial identity of the active site tetrad, but the upstream Asn is replaced in KR by Met. As in other SDRs, there is a glycine rich NAD(P)-binding motif, but the pattern found in KR does not match the classical SDRs, and is not strictly conserved within this group. Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Single domain daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 53.8 bits (130), Expect = 2e-08
 Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 36/219 (16%)

Query: 30  LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIP-SAKVDAMELD 88
           L   +TGASSGIG   AR  A +G  + +  R      D  +A    +P +A+V     D
Sbjct: 3   LKVFITGASSGIGQALAREYARQGATLGLVARR----TDALQAFAARLPKAARVSVYAAD 58

Query: 89  VSSLASVRKFASEY-NSQGRPLNILINNAGIMASPFMLSKDNIELQ-----FATNHLGHF 142
           V    ++   A+++  + G P +++I NAGI  S   L+++  +L        TN+ G  
Sbjct: 59  VRDADALAAAAADFIAAHGLP-DVVIANAGI--SVGTLTEEREDLAVFREVMDTNYFGMV 115

Query: 143 LLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSK 202
                 +  M     +++R G +V ++S A       G+R             GAY  SK
Sbjct: 116 ATFQPFIAPM-----RAARRGTLVGIASVA-------GVR--------GLPGAGAYSASK 155

Query: 203 LANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN 241
            A I + + L   L+  GV +   ++ PG I T +  +N
Sbjct: 156 AAAIKYLESLRVELRPAGVRVV--TIAPGYIRTPMTAHN 192

Length = 257

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 53.7 bits (129), Expect = 3e-08
 Identities = 53/220 (24%), Positives = 84/220 (38%), Gaps = 46/220 (20%)

Query: 26  DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAM 85
                 AIVTG S GIG      L   G +VI                +KE     VD  
Sbjct: 3   GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVI-------------NFDIKEPSYNDVDYF 49

Query: 86  ELDVSS----LASVRKFASEYNSQGRPLNILINNAGI--MASPFMLSKDNIELQFATNHL 139
           ++DVS+    +  +    S+Y      ++IL+NNAGI    +   + +D  +     N  
Sbjct: 50  KVDVSNKEQVIKGIDYVISKYGR----IDILVNNAGIESYGAIHAVEEDEWDRIINVNVN 105

Query: 140 GHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYG 199
           G FL++   +  M K       +G I+N++S               +   +   +  AY 
Sbjct: 106 GIFLMSKYTIPYMLKQ-----DKGVIINIAS---------------VQSFAVTRNAAAYV 145

Query: 200 QSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
            SK A +   + +A    +    I   ++ PGSI T L  
Sbjct: 146 TSKHAVLGLTRSIA---VDYAPTIRCVAVCPGSIRTPLLE 182

Length = 258

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 53.6 bits (129), Expect = 3e-08
 Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 26  DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAM 85
           D TG  A+VTG+S GIG   A  LA  G  VI+  R+ A      E++  +       A+
Sbjct: 7   DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ--GLSAHAL 64

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGI 118
             DV+   +VR     + ++  P++IL+NNAG+
Sbjct: 65  AFDVTDHDAVRAAIDAFEAEIGPIDILVNNAGM 97

Length = 255

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 53.6 bits (129), Expect = 3e-08
 Identities = 54/212 (25%), Positives = 86/212 (40%), Gaps = 41/212 (19%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
             ++TG SSGIG   A      G  V    R            V+ + +A   A++LDV+
Sbjct: 3   VVLITGCSSGIGRALADAFKAAGYEVWATARK--------AEDVEALAAAGFTAVQLDVN 54

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGIMASPFMLS--KDNIELQFATNHLGHFLLTHLL 148
             A++ + A E  ++   L++LINNAG  A   +L    + +  QF TN      +T  L
Sbjct: 55  DGAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRAL 114

Query: 149 LDTMKKTAQKSSREGRIVNVSSEA----HRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
              ++++       G +VN+ S +      FA                   GAY  SK A
Sbjct: 115 FPLLRRS------RGLVVNIGSVSGVLVTPFA-------------------GAYCASKAA 149

Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSIVTN 236
             +HA   A  L+     +    + PG+I + 
Sbjct: 150 --VHALSDALRLELAPFGVQVMEVQPGAIASQ 179

Length = 274

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 53.2 bits (128), Expect = 3e-08
 Identities = 61/217 (28%), Positives = 86/217 (39%), Gaps = 33/217 (15%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDA--ME 86
           G  A+VTG ++GIG  TA   A  G  V++A R+ A G    E  V  I  A  +A  + 
Sbjct: 7   GKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGG----EETVALIREAGGEALFVA 62

Query: 87  LDVSSLASVRKFASE-YNSQGRPLNILINNAGIMASPFML---SKDNIELQFATNHLGHF 142
            DV+  A V+    +   + GR L+   NNAGI      L   S+   +     N  G +
Sbjct: 63  CDVTRDAEVKALVEQTIAAYGR-LDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVW 121

Query: 143 LLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSK 202
           L     +  M          G IVN +S A                  A      Y  SK
Sbjct: 122 LCMKYQIPLMLAQGG-----GAIVNTASVA---------------GLGAAPKMSIYAASK 161

Query: 203 LANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
            A I   K  A    + G+ +  N++ P  I T++FR
Sbjct: 162 HAVIGLTKSAAIEYAKKGIRV--NAVCPAVIDTDMFR 196

Length = 253

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 53.4 bits (129), Expect = 3e-08
 Identities = 50/212 (23%), Positives = 82/212 (38%), Gaps = 36/212 (16%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G  A+VTG + GIG  T   L   G  V+   R+                   V+ +  
Sbjct: 8   AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDLP-----------EGVEFVAA 56

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASP---FM-LSKDNIELQFATNHLGHFL 143
           D+++       A     +   ++IL++  G  ++P   F  L+ +  + +   N L    
Sbjct: 57  DLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVR 116

Query: 144 LTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKL 203
           L   LL  M   A+ S   G I++V+S   R                   S  AY  +K 
Sbjct: 117 LDRALLPGM--IARGS---GVIIHVTSIQRRL--------------PLPESTTAYAAAKA 157

Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVT 235
           A   ++K L+K +   GV +  N++ PG I T
Sbjct: 158 ALSTYSKSLSKEVAPKGVRV--NTVSPGWIET 187

Length = 260

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 53.0 bits (128), Expect = 3e-08
 Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 22/101 (21%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL- 87
           G  AI+TGASSGIG   A++ A  G  V++  R  A      + +V EI +   +A+ L 
Sbjct: 6   GKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAE----LDQLVAEIRAEGGEAVALA 61

Query: 88  -DVSSLA--------SVRKFASEYNSQGRPLNILINNAGIM 119
            DV   A        +V +F       G  L+I  NNAG +
Sbjct: 62  GDVRDEAYAKALVALAVERF-------GG-LDIAFNNAGTL 94

Length = 254

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 53.2 bits (128), Expect = 4e-08
 Identities = 34/95 (35%), Positives = 46/95 (48%), Gaps = 11/95 (11%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G  A++TG  SGIG  TAR LA  G  V++   +  AGK    A   E+    V     D
Sbjct: 7   GRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGK----AAADEVGGLFVPT---D 59

Query: 89  VSSLASVRK-FASEYNSQGRPLNILINNAGIMASP 122
           V+   +V   F +   + G  ++I  NNAGI  SP
Sbjct: 60  VTDEDAVNALFDTAAETYGS-VDIAFNNAGI--SP 91

Length = 255

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 53.1 bits (128), Expect = 4e-08
 Identities = 45/156 (28%), Positives = 64/156 (41%), Gaps = 27/156 (17%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G   IVTG SSGIG    + L   G +V+ A        D+      +        +  
Sbjct: 8   QGKIIIVTGGSSGIGLAIVKELLANGANVVNA--------DIHGG---DGQHENYQFVPT 56

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIM-----------ASPFMLSKDNIELQFAT 136
           DVSS   V    +E   +   ++ L+NNAGI            A  + L++   +  F  
Sbjct: 57  DVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNI 116

Query: 137 NHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA 172
           N  G FL++  +   M K  Q     G IVN+SSEA
Sbjct: 117 NQKGVFLMSQAVARQMVK--QHD---GVIVNMSSEA 147

Length = 266

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 52.6 bits (126), Expect = 5e-08
 Identities = 59/211 (27%), Positives = 91/211 (43%), Gaps = 29/211 (13%)

Query: 25  IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDA 84
            D +G  A+VTGAS GIG E AR+L  +G   I+ +      K   EA+  E+   +V  
Sbjct: 2   FDLSGRKALVTGASGGIGEEIARLLHAQG--AIVGLHGTRVEK--LEALAAEL-GERVKI 56

Query: 85  MELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFM--LSKDNIELQFATNHLGHF 142
              ++S    V+    +  +    ++IL+NNAGI        +S ++ +     N    F
Sbjct: 57  FPANLSDRDEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATF 116

Query: 143 LLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSK 202
            LT  L   M +      R GRI+N++S         G+      +    N    Y  SK
Sbjct: 117 RLTRELTHPMMR-----RRYGRIINITSVV-------GV----TGNPGQAN----YCASK 156

Query: 203 LANILHAKELAKHLKEDGVNITANSLHPGSI 233
              I  +K LA+ +     N+T N + PG I
Sbjct: 157 AGMIGFSKSLAQEIATR--NVTVNCVAPGFI 185

Length = 245

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 52.7 bits (127), Expect = 5e-08
 Identities = 46/206 (22%), Positives = 81/206 (39%), Gaps = 29/206 (14%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
            A+V G    +G      LA  G  V +A  N     +V + I  E           D +
Sbjct: 4   VAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADAT 63

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGIMASPFM--LSKDNIELQFATNHLGHFLLTHLL 148
           S  SV   +   +     +++L+ NAGI  + F+      + +     N +G+FL     
Sbjct: 64  SEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFL----- 118

Query: 149 LDTMKKTAQ---KSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
               ++ ++   +   +GRI+ ++S++ +               S +NS   Y  +K   
Sbjct: 119 --CAREFSRLMIRDGIQGRIIQINSKSGKVG-------------SKHNS--GYSAAKFGG 161

Query: 206 ILHAKELAKHLKEDGVNITANSLHPG 231
           +   + LA  L E G  IT +SL  G
Sbjct: 162 VGLTQSLALDLAEYG--ITVHSLMLG 185

Length = 259

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 52.7 bits (127), Expect = 6e-08
 Identities = 58/217 (26%), Positives = 91/217 (41%), Gaps = 36/217 (16%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G   +VTGA+ GIG E AR L  RG  + +     A    +   +       +V  +  D
Sbjct: 9   GKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELG---GDDRVLTVVAD 65

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIMAS-PFMLS-----KDNIELQFATNHLGHF 142
           V+ LA+++  A E   +   +++++ NAGI +            +  I++    N LG F
Sbjct: 66  VTDLAAMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDV----NLLGVF 121

Query: 143 LLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSK 202
                 L  + +        G ++ VSS A  FA + G+        +AY +  A G   
Sbjct: 122 HTVRATLPALIERR------GYVLQVSSLA-AFAAAPGM--------AAYCASKA-GVEA 165

Query: 203 LANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
            AN L   E+A H    GV  T  S +   I T+L R
Sbjct: 166 FANALRL-EVAHH----GV--TVGSAYLSWIDTDLVR 195

Length = 296

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 52.2 bits (125), Expect = 7e-08
 Identities = 49/210 (23%), Positives = 82/210 (39%), Gaps = 29/210 (13%)

Query: 33  IVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSL 92
           IVTG S GIG    R     G  V+   R  AAG+ +   + +  P +    +  DV+  
Sbjct: 13  IVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCK-FVPCDVTKE 71

Query: 93  ASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFAT----NHLGHFLLTHLL 148
             ++   S    +   ++ L+NNAG    P   + +    +F      N + +FL +   
Sbjct: 72  EDIKTLISVTVERFGRIDCLVNNAG-WHPPHQTTDETSAQEFRDLLNLNLISYFLASKYA 130

Query: 149 LDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILH 208
           L  ++K+      +G I+N+SS        +                  Y  +K A    
Sbjct: 131 LPHLRKS------QGNIINLSSLVGSIGQKQAA---------------PYVATKGAITAM 169

Query: 209 AKELAKHLKEDGVNITANSLHPGSIVTNLF 238
            K LA  + E    +  N + PG+I T L+
Sbjct: 170 TKALA--VDESRYGVRVNCISPGNIWTPLW 197

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 51.7 bits (124), Expect = 8e-08
 Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 14/143 (9%)

Query: 34  VTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLA 93
           +TGA+SGIG ETA + A  G  V +   +      +   +  E   A      LDV+  A
Sbjct: 5   ITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAELGAENVVAGA----LDVTDRA 60

Query: 94  SVRKFASEY--NSQGRPLNILINNAGIM-ASPF-MLSKDNIELQFATNHLGHFLLTHLLL 149
           +     +++   + GR L+ L NNAG+    PF  +     +     N  G     +  L
Sbjct: 61  AWAAALADFAAATGGR-LDALFNNAGVGRGGPFEDVPLAAHDRMVDINVKGVLNGAYAAL 119

Query: 150 DTMKKTAQKSSREGRIVNVSSEA 172
             +K T        R++N +S +
Sbjct: 120 PYLKATPG-----ARVINTASSS 137

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 52.0 bits (124), Expect = 9e-08
 Identities = 65/220 (29%), Positives = 94/220 (42%), Gaps = 39/220 (17%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G  A+VTGAS GIG   A+ LA  G  V +   N    K+  E  V EI S    A  + 
Sbjct: 4   GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNR---KEEAEETVYEIQSNGGSAFSIG 60

Query: 89  VSSLASVRKFASEYNS-----QGRP----LNILINNAGIMASPFM--LSKDNIELQFATN 137
            ++L S+    + Y+S     Q R      +ILINNAGI    F+   ++   +   + N
Sbjct: 61  -ANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVN 119

Query: 138 HLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGA 197
               F +    L  ++  +       RI+N+SS A R +  +               F A
Sbjct: 120 AKAPFFIIQQALSRLRDNS-------RIINISSAATRISLPD---------------FIA 157

Query: 198 YGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
           Y  +K A       LAK L   G  IT N++ PG I T++
Sbjct: 158 YSMTKGAINTMTFTLAKQLGARG--ITVNAILPGFIKTDM 195

Length = 252

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 51.8 bits (124), Expect = 1e-07
 Identities = 56/210 (26%), Positives = 82/210 (39%), Gaps = 33/210 (15%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G  AIVTG   GIG +        G  V+ A  +   G D  EA   E P+        D
Sbjct: 1   GKVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADFAEA---EGPNLFFVHG--D 55

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGHFLLTH 146
           V+    V+        +   +++L+NNA   +      L  +  +   + N  G + L+ 
Sbjct: 56  VADETLVKFVVYAMLEKLGRIDVLVNNAARGSKGILSSLLLEEWDRILSVNLTGPYELSR 115

Query: 147 LLLDTMKKTAQKSSREGRIVNV-SSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
              D + K       +GRI+N+ S+ A +   SE        D  AY    A  +  L  
Sbjct: 116 YCRDELIK------NKGRIINIASTRAFQ---SE-------PDSEAY----AASKGGLVA 155

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVT 235
           + HA  LA  L  D   I  N + PG I T
Sbjct: 156 LTHA--LAMSLGPD---IRVNCISPGWINT 180

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 51.6 bits (123), Expect = 1e-07
 Identities = 59/218 (27%), Positives = 86/218 (39%), Gaps = 31/218 (14%)

Query: 26  DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAM 85
           D  G  A++TGAS+GIG   A      G  V +A R++ A + + + I       KV  +
Sbjct: 6   DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGT--SGGKVVPV 63

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFA--TNHLGHFL 143
             DVS    V     +  ++   ++I + NAGI+    ML     E Q    TN  G FL
Sbjct: 64  CCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFL 123

Query: 144 LTHLLLDTMKKTAQKSSREGR----IVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYG 199
                  T +  A+   ++G+    I   S   H     + +                Y 
Sbjct: 124 -------TAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQV--------------SHYC 162

Query: 200 QSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
            SK A I   K +A  L      I  NS+ PG I+T L
Sbjct: 163 ASKAAVIHLTKAMAVELAPH--KIRVNSVSPGYILTEL 198

Length = 253

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 51.3 bits (123), Expect = 1e-07
 Identities = 57/248 (22%), Positives = 85/248 (34%), Gaps = 61/248 (24%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
           T ++TGA+SGIG  TA +L   G  VI        G D+REA V             D+S
Sbjct: 1   TIVITGAASGIGAATAELLEDAGHTVI--------GIDLREADVIA-----------DLS 41

Query: 91  SLASVRK-FASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLL 149
           +        A         L+ L+N AG+  +          L    N+ G   L   LL
Sbjct: 42  TPEGRAAAIADVLARCSGVLDGLVNCAGVGGTT------VAGLVLKVNYFGLRALMEALL 95

Query: 150 DTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDK-----------------INDESAY 192
             ++K           V VSS A       G   DK                 + + +  
Sbjct: 96  PRLRKGHG-----PAAVVVSSIA-----GAGWAQDKLELAKALAAGTEARAVALAEHAGQ 145

Query: 193 NSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLF-------RYNGILR 245
             + AY  SK A  +  +  A      G  +  N++ PG + T +        R    + 
Sbjct: 146 PGYLAYAGSKEALTVWTRRRA-ATWLYGAGVRVNTVAPGPVETPILQAFLQDPRGGESVD 204

Query: 246 GFCNTVGK 253
            F   +G+
Sbjct: 205 AFVTPMGR 212

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 50.2 bits (121), Expect = 1e-07
 Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 4/101 (3%)

Query: 31  TAIVTGASSGIGTETARVLALRG-VHVIMAVRNMAAGKDVREAIVKEIPS--AKVDAMEL 87
           T +VTG   G+G E AR LA RG  H+++  R+ A   +    +  E+ +  A+V  +  
Sbjct: 2   TYLVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALL-AELEARGAEVTVVAC 60

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKD 128
           DVS   +VR   +E  + G PL  +I+ AG++    + +  
Sbjct: 61  DVSDRDAVRALLAEIRADGPPLRGVIHAAGVLRDALLANMT 101

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 51.3 bits (123), Expect = 2e-07
 Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 19/154 (12%)

Query: 33  IVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAM---ELDV 89
           +VTGA++G G    R    +G  VI      A G+  R+  ++E+     D +   +LDV
Sbjct: 4   LVTGATAGFGECITRRFIQQGHKVI------ATGR--RQERLQELKDELGDNLYIAQLDV 55

Query: 90  SSLASVRKFASEYNSQGRPLNILINNAGI---MASPFMLSKDNIELQFATNHLGHFLLTH 146
            + A++ +  +   ++ R +++L+NNAG+   +      S ++ E    TN+ G   +T 
Sbjct: 56  RNRAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTR 115

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG 180
            +L  M +        G I+N+ S A  + Y+ G
Sbjct: 116 AVLPGMVE-----RNHGHIINIGSTAGSWPYAGG 144

Length = 248

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 50.7 bits (122), Expect = 2e-07
 Identities = 51/166 (30%), Positives = 77/166 (46%), Gaps = 31/166 (18%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G   +VTGA+ GIG   A   A  G  V++  R+     ++   +  E+ +A  +A+ L
Sbjct: 7   AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRS-----ELVHEVAAELRAAGGEALAL 61

Query: 88  --DVSSLASVRK-FASEYNSQGRPLNILINNAG--IMASPFM-LSKDNIELQ-----FAT 136
             D+ + A  +   A+   + GR +++LINN G  I A PF    ++ IE +     F T
Sbjct: 62  TADLETYAGAQAAMAAAVEAFGR-IDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPT 120

Query: 137 NHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA----HRFAYS 178
                 +L H+L       AQ     G IVNVSS A    +R  YS
Sbjct: 121 LWCCRAVLPHML-------AQGG---GAIVNVSSIATRGINRVPYS 156

Length = 260

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 50.8 bits (122), Expect = 3e-07
 Identities = 43/158 (27%), Positives = 66/158 (41%), Gaps = 18/158 (11%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIM-----AVRNMAAGKDVREAIVKEIPSA--K 81
           G   IVTGA  GIG   A   A  G  V++      +   A+G    +A+V EI +A  +
Sbjct: 6   GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGE 65

Query: 82  VDAMELDVSSLAS----VRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATN 137
             A   D++        V      +   G  L++L+NNAGI+    + +    E      
Sbjct: 66  AVANGDDIADWDGAANLVDAAVETF---GG-LDVLVNNAGILRDRMIANMSEEEWDAVIA 121

Query: 138 -HL-GHFLLTHLLLDTMKKTAQK-SSREGRIVNVSSEA 172
            HL GHF          +  ++   + + RI+N SS A
Sbjct: 122 VHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGA 159

Length = 286

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 50.1 bits (120), Expect = 4e-07
 Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 10/145 (6%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G  AIVTG ++G+G   A  LA  G  +I+         + R  I KE    KV  +++
Sbjct: 14  DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE--GRKVTFVQV 70

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAG-IMASPFMLSKD-NIELQFATNHLGHFLLT 145
           D++   S  K   E   +   ++IL+NNAG I  +P +  KD +       N    + L+
Sbjct: 71  DLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLS 130

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSS 170
             +   M K  Q S   G+I+N++S
Sbjct: 131 QAVAKVMAK--QGS---GKIINIAS 150

Length = 258

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 49.7 bits (119), Expect = 6e-07
 Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 34/214 (15%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDA--M 85
            G  A++TGAS GIG   A+  A  G  ++    N    + V + +        ++A   
Sbjct: 9   KGKIALITGASYGIGFAIAKAYAKAGATIVF---NDINQELVDKGL-AAYRELGIEAHGY 64

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFML--SKDNIELQFATNHLGHFL 143
             DV+    V+   S+   +   ++IL+NNAGI+    ML  S ++       +    F+
Sbjct: 65  VCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFI 124

Query: 144 LTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKL 203
           ++  ++ +M K        G+I+N+ S       SE  R       SAY +  A G  K+
Sbjct: 125 VSKAVIPSMIK-----KGHGKIINICS-----MMSELGR----ETVSAYAA--AKGGLKM 168

Query: 204 --ANILHAKELAKHLKEDGVNITANSLHPGSIVT 235
              NI  A E  +       NI  N + PG I T
Sbjct: 169 LTKNI--ASEYGEA------NIQCNGIGPGYIAT 194

Length = 265

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 49.4 bits (118), Expect = 6e-07
 Identities = 42/157 (26%), Positives = 64/157 (40%), Gaps = 15/157 (9%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G   +VTGA+ GIG   A  LA  G  V++  R+     +V   I+             D
Sbjct: 4   GKVVVVTGAAQGIGRGVAERLAGEGARVLLVDRS-ELVHEVLAEILAA--GDAAHVHTAD 60

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAG--IMASPFM-LSKDNIELQFATNHLGHFLLT 145
           + + A  +        +   +++LINN G  I A P+    ++ IE +   +        
Sbjct: 61  LETYAGAQGVVRAAVERFGRVDVLINNVGGTIWAKPYEHYEEEQIEAEIRRSLFPTLWCC 120

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEA----HRFAYS 178
             +L  M +  Q     G IVNVSS A    +R  YS
Sbjct: 121 RAVLPHMLERQQ-----GVIVNVSSIATRGIYRIPYS 152

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 49.0 bits (117), Expect = 7e-07
 Identities = 48/210 (22%), Positives = 82/210 (39%), Gaps = 36/210 (17%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
             +VTGAS G+G   AR  A  G  V++   N     +  EA+  E    +  A++ DV 
Sbjct: 2   VVLVTGASRGLGAAIARSFAREGARVVV---NYYRSTESAEAVAAEA-GERAIAIQADVR 57

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGIMASPFM----LSKDNIELQFATNHL-----GH 141
               V+    E  +   P++ ++NNA ++  PF      + D I+ +     L     G 
Sbjct: 58  DRDQVQAMIEEAKNHFGPVDTIVNNA-LIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKGA 116

Query: 142 FLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQS 201
             L   +L   K+        GR++N+ +                  ++    +  Y  +
Sbjct: 117 LNLLQAVLPDFKE-----RGSGRVINIGTNLF---------------QNPVVPYHDYTTA 156

Query: 202 KLANILHAKELAKHLKEDGVNITANSLHPG 231
           K A +   + +AK L   G  IT N +  G
Sbjct: 157 KAALLGFTRNMAKELGPYG--ITVNMVSGG 184

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 49.2 bits (118), Expect = 8e-07
 Identities = 55/218 (25%), Positives = 82/218 (37%), Gaps = 37/218 (16%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDA--M 85
            G  A++TG  SGIG   A   A  G  V  A+  +   +D  E   K I         +
Sbjct: 25  KGKKALITGGDSGIGRAVAIAFAREGADV--AINYLPEEEDDAEETKKLIEEEGRKCLLI 82

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGI-MASPFM--LSKDNIELQFATNHLGHF 142
             D+   +  R    E   +   L+IL+NNA        +  ++ + +E  F TN    F
Sbjct: 83  PGDLGDESFCRDLVKEVVKEFGKLDILVNNAAYQHPQESIEDITTEQLEKTFRTNIFSMF 142

Query: 143 LLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGA---YG 199
            LT   L  +KK +        I+N +S               +    AY        Y 
Sbjct: 143 YLTKAALPHLKKGS-------SIINTTS---------------VT---AYKGSPHLLDYA 177

Query: 200 QSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
            +K A +   + L+  L E G  I  N++ PG I T L
Sbjct: 178 ATKGAIVAFTRGLSLQLAEKG--IRVNAVAPGPIWTPL 213

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 49.2 bits (118), Expect = 8e-07
 Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 15/149 (10%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAV-RNMAAGKDVREAIVKEIPSAKVDA-- 84
            G  A+VTG + G+G   AR  A RG   ++   RN   G    EA   E+ +    A  
Sbjct: 5   DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKG----EAQAAELEALGAKAVF 60

Query: 85  MELDVSSLASVRKFASEYNSQ-GRPLNILINNAGIMASPFML--SKDNIELQFATNHLGH 141
           ++ D+S +   R+  +  +   GR L+ L+N AG+     +L  S +  +  FA N    
Sbjct: 61  VQADLSDVEDCRRVVAAADEAFGR-LDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAP 119

Query: 142 FLLTHLLLDTMKKTAQKSSREGRIVNVSS 170
           F L    +  M+    +   EG IVN+ S
Sbjct: 120 FFLMQEAIKLMR----RRKAEGTIVNIGS 144

Length = 260

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 49.1 bits (117), Expect = 1e-06
 Identities = 59/219 (26%), Positives = 86/219 (39%), Gaps = 34/219 (15%)

Query: 24  GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVD 83
            ID +G  A  T +S GIG   ARVLA  G  VI+  RN    K  RE I K   +  V 
Sbjct: 3   KIDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKI-KSESNVDVS 61

Query: 84  AMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFM-LSKDNIELQFATNHLGHF 142
            +  D++    + +   E  + G P     +  G     FM +S ++ E           
Sbjct: 62  YIVADLTKREDLERTVKELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAV 121

Query: 143 LLTHLLLDTMKKTAQKSSREGRIVNVSSEAHR-----FAYSEGIRFDKINDESAYNSFGA 197
            LT  L+  M++        GRI+  +S A +      A S  +R               
Sbjct: 122 YLTRALVPAMER-----KGFGRIIYSTSVAIKEPIPNIALSNVVRI-------------- 162

Query: 198 YGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTN 236
                +A ++  + LAK L   G  IT N + PG I T+
Sbjct: 163 ----SMAGLV--RTLAKELGPKG--ITVNGIMPGIIRTD 193

Length = 263

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 48.6 bits (116), Expect = 1e-06
 Identities = 58/211 (27%), Positives = 88/211 (41%), Gaps = 27/211 (12%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL- 87
           G  A VTGA SGIG   A  LA  G  V +         D      + I +A   A+++ 
Sbjct: 8   GQVAFVTGAGSGIGQRIAIGLAQAGADVALFDL---RTDDGLAETAEHIEAAGRRAIQIA 64

Query: 88  -DVSSLASVRKFASEYNSQGRPLNILINNAGIM-ASPFM-LSKDNIELQFATNHLGHFLL 144
            DV+S A +R   +   ++   L + +N AGI  A+P   + ++  +     N  G FL 
Sbjct: 65  ADVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLS 124

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
                  M +     +  G IVN++S +       GI  ++   ++ YN+      SK  
Sbjct: 125 CQAEARAMLE-----NGGGSIVNIASMS-------GIIVNRGLLQAHYNA------SKAG 166

Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSIVT 235
            I  +K LA      G  I  NS+ PG   T
Sbjct: 167 VIHLSKSLAMEWVGRG--IRVNSISPGYTAT 195

Length = 254

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 49.0 bits (117), Expect = 1e-06
 Identities = 59/219 (26%), Positives = 93/219 (42%), Gaps = 38/219 (17%)

Query: 26  DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAG-KDVREAIVK---EIPSAK 81
           D  G   ++TG S+G+G   A         V++  R+      DV E I K   E  + K
Sbjct: 4   DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVK 63

Query: 82  VD-AMELDVSSL--ASVRKFASEYNSQGRPLNILINNAGI-MASP-FMLSKDNIELQFAT 136
            D  +E DV +L   +V++F +        L+++INNAGI  A P   +S ++      T
Sbjct: 64  GDVTVESDVVNLIQTAVKEFGT--------LDVMINNAGIENAVPSHEMSLEDWNKVINT 115

Query: 137 NHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFG 196
           N  G FL +   +    +   K    G I+N+SS               ++++  +  F 
Sbjct: 116 NLTGAFLGSREAIKYFVEHDIK----GNIINMSS---------------VHEQIPWPLFV 156

Query: 197 AYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVT 235
            Y  SK    L  + LA      G  I  N++ PG+I T
Sbjct: 157 HYAASKGGVKLMTETLAMEYAPKG--IRVNNIGPGAINT 193

Length = 261

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 48.8 bits (117), Expect = 1e-06
 Identities = 49/214 (22%), Positives = 78/214 (36%), Gaps = 38/214 (17%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G   +V+G   G+G   A   A  G  V++A R      +V      EI      A+ +
Sbjct: 4   KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEV----AAEIDDLGRRALAV 59

Query: 88  --DVSSLASVRKFASEYNSQ-GRPLNILINNAGIMASPFMLSKDNIELQ-----FATNHL 139
             D++         +    + GR ++ L+NNA     P M    + +          N L
Sbjct: 60  PTDITDEDQCANLVALALERFGR-VDALVNNA--FRVPSMKPLADADFAHWRAVIELNVL 116

Query: 140 GHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYG 199
           G   LT      + ++       G IV ++S   R                +   +GAY 
Sbjct: 117 GTLRLTQAFTPALAES------GGSIVMINSMVLR---------------HSQPKYGAYK 155

Query: 200 QSKLANILHAKELAKHLKEDGVNITANSLHPGSI 233
            +K A +  ++ LA  L   G  I  NS+ PG I
Sbjct: 156 MAKGALLAASQSLATELGPQG--IRVNSVAPGYI 187

Length = 258

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 48.9 bits (117), Expect = 1e-06
 Identities = 53/215 (24%), Positives = 87/215 (40%), Gaps = 34/215 (15%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHV-IMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
           G  A++TG  SGIG   A + A  G  + I+ +       + ++ + KE    K   +  
Sbjct: 46  GKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKE--GVKCLLIPG 103

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAG--IMASPFM-LSKDNIELQFATNHLGHFLL 144
           DVS  A  +    E   +   L+IL+NNA           ++ + ++  F TN   +F +
Sbjct: 104 DVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHM 163

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
           T   L  +K+ +        I+N  S               I       +   Y  +K A
Sbjct: 164 TKAALPHLKQGSA-------IINTGS---------------ITGYEGNETLIDYSATKGA 201

Query: 205 NILHA--KELAKHLKEDGVNITANSLHPGSIVTNL 237
             +HA  + LA+ L + G  I  N++ PG I T L
Sbjct: 202 --IHAFTRSLAQSLVQKG--IRVNAVAPGPIWTPL 232

Length = 290

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 48.6 bits (116), Expect = 1e-06
 Identities = 59/222 (26%), Positives = 77/222 (34%), Gaps = 40/222 (18%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPS--AKVDAME 86
           G  A+VTGAS GIG   A  L   G  V +  R             +EI +   K   + 
Sbjct: 3   GKIALVTGASRGIGRGIALQLGEAGATVYITGR---TILPQLPGTAEEIEARGGKCIPVR 59

Query: 87  LDVSSLASVRKFASEYNS--QGRPLNILINNA--------GIMASPFM-LSKDNIELQFA 135
            D S    V           QGR L+IL+NNA          +A PF        +    
Sbjct: 60  CDHSDDDEVEALFERVAREQQGR-LDILVNNAYAAVQLILVGVAKPFWEEPPTIWDDINN 118

Query: 136 TNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSF 195
                H+  +      M K  +     G IV +SS                  E  +N  
Sbjct: 119 VGLRAHYACSVYAAPLMVKAGK-----GLIVIISSTGG--------------LEYLFNV- 158

Query: 196 GAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
            AYG  K A    A ++A  LK  G  +   SL PG + T L
Sbjct: 159 -AYGVGKAAIDRMAADMAHELKPHG--VAVVSLWPGFVRTEL 197

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 48.0 bits (115), Expect = 1e-06
 Identities = 49/212 (23%), Positives = 74/212 (34%), Gaps = 38/212 (17%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL--D 88
            A+VTGA+  IG   A  LA  G  V++      A       +  E+ + +  A+ +  D
Sbjct: 2   VALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQ---RLKDELNALRNSAVLVQAD 58

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIM--ASPFMLSKDNIELQFATNHLGHFLLTH 146
           +S  A+     +         ++L+NNA           S+D     F  N    +LL  
Sbjct: 59  LSDFAACADLVAAAFRAFGRCDVLVNNASAFYPTPLGQGSEDAWAELFGINLKAPYLLIQ 118

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSK--LA 204
                        SR G I+N+       A ++                 AY  SK  L 
Sbjct: 119 AF-----ARRLAGSRNGSIINIID-----AMTDRPLTGYF----------AYCMSKAALE 158

Query: 205 NI--LHAKELAKHLKEDGVNITANSLHPGSIV 234
            +    A ELA        NI  N + PG I+
Sbjct: 159 GLTRSAALELAP-------NIRVNGIAPGLIL 183

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 48.1 bits (115), Expect = 3e-06
 Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 2/94 (2%)

Query: 26  DGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDA 84
            G   T ++TG   G+G   AR LA RG  H+++  R   A +    A +     A+V  
Sbjct: 147 GGLDGTYLITGGLGGLGLLVARWLAARGARHLVLLSRRGPAPRAAARAALLRAGGARVSV 206

Query: 85  MELDVSSLASVRKFASEYNSQGRPLNILINNAGI 118
           +  DV+  A++    +E  + G PL  +I+ AG+
Sbjct: 207 VRCDVTDPAALAALLAEL-AAGGPLAGVIHAAGV 239

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 47.8 bits (114), Expect = 3e-06
 Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 2/88 (2%)

Query: 33  IVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSL 92
           ++TGASSGIG  TA   A RG  +++A R+  A + V E        A+V  +  DV+  
Sbjct: 11  VITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL--GAEVLVVPTDVTDA 68

Query: 93  ASVRKFASEYNSQGRPLNILINNAGIMA 120
             V+  A++  S G  +++ +NN G+ A
Sbjct: 69  DQVKALATQAASFGGRIDVWVNNVGVGA 96

Length = 330

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 46.6 bits (111), Expect = 5e-06
 Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 25/206 (12%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSS 91
           A+VTGA  GIG   A+ L   G  V +   N    +   + + K+   A   A++ DVS 
Sbjct: 5   ALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAI--AVKADVSD 62

Query: 92  LASVRKFASEYNSQGRPLNILINNAGIMASPFM--LSKDNIELQFATNHLGHFLLTHLLL 149
              V     +       LN+++NNAG+  +  +  ++++  +  +  N  G         
Sbjct: 63  RDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQ 122

Query: 150 DTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHA 209
           +  KK        G+I+N +S+A       G      N E A      Y  +K A     
Sbjct: 123 EAFKKLGHG----GKIINATSQAGV----VG------NPELA-----VYSSTKFAVRGLT 163

Query: 210 KELAKHLKEDGVNITANSLHPGSIVT 235
           +  A+ L  +G  IT N+  PG + T
Sbjct: 164 QTAARDLASEG--ITVNAYAPGIVKT 187

Length = 256

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 46.5 bits (111), Expect = 6e-06
 Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 7/89 (7%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G  AIVTG ++ IG   AR L   G  V +   +   G  V  ++       +   +  D
Sbjct: 6   GKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL-----GERARFIATD 60

Query: 89  VSSLASVRK-FASEYNSQGRPLNILINNA 116
           ++  A++ +  A+     GR ++IL+N A
Sbjct: 61  ITDDAAIERAVATVVARFGR-VDILVNLA 88

Length = 261

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 46.4 bits (110), Expect = 6e-06
 Identities = 51/216 (23%), Positives = 89/216 (41%), Gaps = 27/216 (12%)

Query: 23  QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKV 82
           Q  D  G  AI+TG ++G+G   A  LA  G  ++     +A   + +  +  E    K 
Sbjct: 2   QLFDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGV--GVAEAPETQAQV--EALGRKF 57

Query: 83  DAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFML--SKDNIELQFATNHLG 140
             +  D+     +    S+       ++ILINNAGI+    +L     + +     N   
Sbjct: 58  HFITADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKT 117

Query: 141 HFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQ 200
            F L+      + K   K    G+I+N++S     ++  GIR              +Y  
Sbjct: 118 VFFLSQ----AVAKQFVKQGNGGKIINIAS---MLSFQGGIRVP------------SYTA 158

Query: 201 SKLANILHAKELAKHLKEDGVNITANSLHPGSIVTN 236
           SK A +   + LA  L +  +N+  N++ PG + T+
Sbjct: 159 SKSAVMGLTRALATELSQYNINV--NAIAPGYMATD 192

Length = 251

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 46.1 bits (110), Expect = 8e-06
 Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 32/150 (21%)

Query: 33  IVTGASSGIGTETARVLALRG-VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL--DV 89
           IVTG +SGIG   +  LA  G + VI   R+    +   E +    P A+   ++L  D 
Sbjct: 11  IVTGGASGIGAAISLRLAEEGAIPVIFG-RSAPDDE-FAEELRALQPRAEFVQVDLTDDA 68

Query: 90  SSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFAT---------NHLG 140
               +V +  +++   GR ++ L+NNAG+         D + L+            N + 
Sbjct: 69  QCRDAVEQTVAKF---GR-IDGLVNNAGV--------NDGVGLEAGREAFVASLERNLIH 116

Query: 141 HFLLTHLLLDTMKKTAQKSSREGRIVNVSS 170
           ++++ H  L  +K +       G IVN+SS
Sbjct: 117 YYVMAHYCLPHLKAS------RGAIVNISS 140

Length = 258

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 45.9 bits (109), Expect = 9e-06
 Identities = 57/220 (25%), Positives = 81/220 (36%), Gaps = 37/220 (16%)

Query: 26  DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAM 85
             TG   +V G S GIG    R     G +V       A  KD  E + +E  +    A+
Sbjct: 3   AFTGKKVLVLGGSRGIGAAIVRRFVTDGANV---RFTYAGSKDAAERLAQETGA---TAV 56

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGI--MASPFMLSKDNIELQFATNHLGHFL 143
           + D +   +V     +       L+IL+ NAGI        L  D+I+  F  N      
Sbjct: 57  QTDSADRDAVIDVVRKSG----ALDILVVNAGIAVFGDALELDADDIDRLFKIN------ 106

Query: 144 LTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIN-DESAYNSFGAYGQSK 202
             H       + A++    GRI+ + S               +N D        AY  SK
Sbjct: 107 -IHAPYHASVEAARQMPEGGRIIIIGS---------------VNGDRMPVAGMAAYAASK 150

Query: 203 LANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG 242
            A    A+ LA+     G  IT N + PG I T+    NG
Sbjct: 151 SALQGMARGLARDFGPRG--ITINVVQPGPIDTDANPANG 188

Length = 237

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 46.0 bits (109), Expect = 9e-06
 Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 31/159 (19%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G  A+VTG + GIG   A  LA +G+++++  RN    KDV ++I  +    ++  + +D
Sbjct: 53  GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVD 112

Query: 89  VSSLAS--VRKFASEYNSQGRPLNILINNAGIMASPFM-------------LSKDNIELQ 133
            S      V++       +G  + +LINN G ++ P+              L K N+E  
Sbjct: 113 FSGDIDEGVKRIKETI--EGLDVGVLINNVG-VSYPYARFFHEVDEELLKNLIKVNVE-- 167

Query: 134 FATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA 172
                 G   +T  +L  M K      ++G I+N+ S A
Sbjct: 168 ------GTTKVTQAVLPGMLK-----RKKGAIINIGSGA 195

Length = 320

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 45.8 bits (109), Expect = 1e-05
 Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 3/92 (3%)

Query: 29  GLTAIVTGAS-SGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
           G   +VT A+ +GIG+ TAR     G  V+++  +     +  + +  E+   +V+A+  
Sbjct: 17  GKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVC 76

Query: 88  DVSSLASVRK-FASEYNSQGRPLNILINNAGI 118
           DV+S A V     +     GR L++L+NNAG+
Sbjct: 77  DVTSEAQVDALIDAAVERLGR-LDVLVNNAGL 107

Length = 262

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 45.1 bits (107), Expect = 2e-05
 Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 12/147 (8%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPS--AKVDAM 85
           +G  A+VTG+S GIG   A  LA  G  +     N A  +   E   +EI +   K  A+
Sbjct: 3   SGKVALVTGSSRGIGKAIALRLAEEGYDI---AVNYARSRKAAEETAEEIEALGRKALAV 59

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNA--GIMASPFMLSKDNIELQFATNHLGHFL 143
           + +V  +  +++  ++ + +   L++ +NNA  G++     L + + +     N      
Sbjct: 60  KANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLF 119

Query: 144 LTHLLLDTMKKTAQKSSREGRIVNVSS 170
                   M+K        G+I+++SS
Sbjct: 120 CAQEAAKLMEKVGG-----GKIISLSS 141

Length = 250

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 44.9 bits (107), Expect = 2e-05
 Identities = 26/86 (30%), Positives = 45/86 (52%)

Query: 33  IVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSL 92
           ++TGASSG+G   AR  A +G  + +  R     ++++  ++   P  KV    LDV+  
Sbjct: 6   LITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDH 65

Query: 93  ASVRKFASEYNSQGRPLNILINNAGI 118
             V +  +E+  +   L+ +I NAGI
Sbjct: 66  DQVFEVFAEFRDELGGLDRVIVNAGI 91

Length = 248

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 44.4 bits (105), Expect = 3e-05
 Identities = 54/220 (24%), Positives = 87/220 (39%), Gaps = 34/220 (15%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIM--AVRNM-------AAGKDVREAIVKEIPS 79
           G  A +TGA+ G G   A  LA  G  +I       +        A ++  +   + + +
Sbjct: 3   GKVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLVEA 62

Query: 80  A--KVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIM--ASPFMLSKDNIELQFA 135
              KV A + DV  LA VR    +   Q   L++++ NAG++     + LS++  +    
Sbjct: 63  LGRKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVLSYGRSWELSEEQWDTVLD 122

Query: 136 TNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSF 195
            N  G +     ++  M +        G I+  SS A       G++        A    
Sbjct: 123 INLTGVWRTCKAVVPHMIERGNG----GSIIITSSVA-------GLKALPGLAHYAAAKH 171

Query: 196 GAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVT 235
           G  G   L   L A ELA++       I  NS+HP S+ T
Sbjct: 172 GLVG---LTKTL-ANELAEY------GIRVNSIHPYSVDT 201

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 43.9 bits (104), Expect = 4e-05
 Identities = 37/149 (24%), Positives = 65/149 (43%), Gaps = 18/149 (12%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
           T +VTG S G+G   AR  A  G  V++   N    +D  EA+  E+   +  A++ DV+
Sbjct: 7   TVLVTGGSRGLGAAIARAFAREGARVVV---NYHQSEDAAEALADELGD-RAIALQADVT 62

Query: 91  SLASVRK-FASEYNSQGRPLNILINNAGI------MASPFM--LSKDNIELQFATNHLGH 141
               V+  FA+     G+P+  ++NNA         A      ++ ++ + Q   +  G 
Sbjct: 63  DREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGA 122

Query: 142 FLLTHLLLDTMKKTAQKSSREGRIVNVSS 170
                  L  M++        GRI+N+ +
Sbjct: 123 LNTIQAALPGMRE-----QGFGRIINIGT 146

Length = 253

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 42.5 bits (101), Expect = 7e-05
 Identities = 24/101 (23%), Positives = 47/101 (46%), Gaps = 4/101 (3%)

Query: 31  TAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPS--AKVDAMEL 87
           T ++TG   G+G   AR LA RG   +++  R+         A++ E+ +  A+V  +  
Sbjct: 2   TYLITGGLGGLGRALARWLAERGARRLVLLSRS-GPDAPGAAALLAELEAAGARVTVVAC 60

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKD 128
           DV+   ++    +   +   PL  +I+ AG++    + S  
Sbjct: 61  DVADRDALAAVLAAIPAVEGPLTGVIHAAGVLDDGVLASLT 101

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 43.5 bits (103), Expect = 7e-05
 Identities = 63/222 (28%), Positives = 93/222 (41%), Gaps = 38/222 (17%)

Query: 33  IVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAMELDVS 90
           +V GA  GIG   AR +   G  V++A  N        EA  K +  A   V   E+DVS
Sbjct: 6   VVIGAG-GIGQAIARRVGA-GKKVLLADYNEENL----EAAAKTLREAGFDVSTQEVDVS 59

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLD 150
           S  SV+  A+   + G P+  L++ AG+  SP   S+ + E     +  G    T L+L+
Sbjct: 60  SRESVKALAATAQTLG-PVTGLVHTAGV--SP---SQASPEAILKVDLYG----TALVLE 109

Query: 151 TMKKTAQKSSREGRIVNVSSEA-HRFAY--------------SEGIRFDKINDESAYNSF 195
              K     +  G  V ++S++ HR                  E +    +  ++  +S 
Sbjct: 110 EFGKVI---APGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSL 166

Query: 196 GAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
            AY  +K AN L     A    E G  I  NS+ PG I T L
Sbjct: 167 HAYQIAKRANALRVMAEAVKWGERGARI--NSISPGIISTPL 206

Length = 275

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 43.0 bits (102), Expect = 7e-05
 Identities = 36/153 (23%), Positives = 60/153 (39%), Gaps = 21/153 (13%)

Query: 33  IVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAM--ELDVS 90
           ++TG + G+G   A  LA +G  + +   N    ++  E  V E  +   +      +V+
Sbjct: 9   VITGGAQGLGRAMAEYLAQKGAKLALIDLN----QEKLEEAVAECGALGTEVRGYAANVT 64

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGIMASPFML-----------SKDNIELQFATNHL 139
               V    ++       LN LINNAGI+    ++           S +  +     N  
Sbjct: 65  DEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLT 124

Query: 140 GHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA 172
           G FL        M ++  K    G I+N+SS A
Sbjct: 125 GVFLCGREAAAKMIESGSK----GVIINISSIA 153

Length = 253

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 43.0 bits (102), Expect = 8e-05
 Identities = 48/220 (21%), Positives = 80/220 (36%), Gaps = 47/220 (21%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMA-----------AGKDVREAIVKE 76
           +G T  +TGAS GIG   A   A  G ++++A +              A +++  A  + 
Sbjct: 5   SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQA 64

Query: 77  IPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGI--MASPFMLSKDNIELQF 134
           +P      +  DV     V    ++   +   ++I +NNA    +           +L  
Sbjct: 65  LP------LVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQ 118

Query: 135 ATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSS----EAHRFAYSEGIRFDKINDES 190
             N  G FL++   L  +KK     S    I+ +S     +   FA              
Sbjct: 119 QINVRGTFLVSQACLPHLKK-----SENPHILTLSPPLNLDPKWFAPH------------ 161

Query: 191 AYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHP 230
                 AY  +K    L    LA+  ++DG  I  N+L P
Sbjct: 162 -----TAYTMAKYGMSLCTLGLAEEFRDDG--IAVNALWP 194

Length = 273

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 42.7 bits (101), Expect = 9e-05
 Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
             I+TG SSG+G   A+  A  G +V++  R     ++ +  I  E    +V  +++DV 
Sbjct: 3   VVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEI--EQFPGQVLTVQMDVR 60

Query: 91  SLASVRKFASEYNSQGRPLNILINNA 116
           +   V+K   + + +   ++ LINNA
Sbjct: 61  NPEDVQKMVEQIDEKFGRIDALINNA 86

Length = 252

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 42.6 bits (100), Expect = 1e-04
 Identities = 55/216 (25%), Positives = 88/216 (40%), Gaps = 36/216 (16%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVK-------EIPSA 80
           +  T +VTGAS G+G + A+  A  G  VI+  R+    + V +AIV+        I   
Sbjct: 5   SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFD 64

Query: 81  KVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIEL---QFATN 137
            + A E +    A+    A     QG+ L+ +++ AG   +   L    +     Q+  N
Sbjct: 65  LMSAEEKEFEQFAA--TIAEAT--QGK-LDGIVHCAGYFYALSPLDFQTVAEWVNQYRIN 119

Query: 138 HLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGA 197
            +    LT  L   +K++   S      V    E+H                 AY  +G 
Sbjct: 120 TVAPMGLTRALFPLLKQSPDAS------VIFVGESHGET------------PKAY--WGG 159

Query: 198 YGQSKLANILHAKELAKHLKEDGVNITANSLHPGSI 233
           +G SK A + +  ++A    E   N+ AN L PG I
Sbjct: 160 FGASK-AALNYLCKVAADEWERFGNLRANVLVPGPI 194

Length = 239

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 42.3 bits (99), Expect = 1e-04
 Identities = 55/233 (23%), Positives = 88/233 (37%), Gaps = 43/233 (18%)

Query: 24  GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVD 83
           G  G G  A++TG +SGIG  T    A RG  V++        K      V  + +   D
Sbjct: 3   GFPGRG--AVITGGASGIGLATGTEFARRGARVVLG----DVDKPGLRQAVNHLRAEGFD 56

Query: 84  A--MELDVSSLASVRKFASEYNSQGRPLNILINNAGI-MASPF--MLSKD-----NIELQ 133
              +  DV     V   A E       ++++ +NAGI +  P   M   D     +++L 
Sbjct: 57  VHGVMCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLW 116

Query: 134 FATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYN 193
            + + +  FL   L   T       +S  G + N                          
Sbjct: 117 GSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNA------------------------- 151

Query: 194 SFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRG 246
             GAYG +K   +  A+ LA+ +  DG+ ++   L P  + TNL   +  +RG
Sbjct: 152 GLGAYGVAKYGVVGLAETLAREVTADGIGVSV--LCPMVVETNLVANSERIRG 202

Length = 275

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 50/212 (23%), Positives = 80/212 (37%), Gaps = 34/212 (16%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSS 91
            ++TG++ GIG   A  LA  G  +I+        +     + +E    K  A   +V+ 
Sbjct: 12  ILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE--GIKAHAAPFNVTH 69

Query: 92  LASVRKFASEYNSQGRPLNILINNAGIMAS-PFM-LSKDNIELQFATNHLGHFLLTHLLL 149
              V            P+++LINNAGI    PF    +       A N    FL++  + 
Sbjct: 70  KQEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVA 129

Query: 150 DTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHA 209
             M K      + G+I+N+ S               +  E   ++   Y  SK A  +  
Sbjct: 130 RYMVK-----RQAGKIINICS---------------MQSELGRDTITPYAASKGAVKMLT 169

Query: 210 K----ELAKHLKEDGVNITANSLHPGSIVTNL 237
           +    ELA+H      NI  N + PG   T +
Sbjct: 170 RGMCVELARH------NIQVNGIAPGYFKTEM 195

Length = 254

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 42.6 bits (100), Expect = 1e-04
 Identities = 37/193 (19%), Positives = 60/193 (31%), Gaps = 30/193 (15%)

Query: 33  IVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSL 92
           +VTG +  IG+     L   G  V    R       +            V+ + LD++  
Sbjct: 4   LVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLS---------GVEFVVLDLTDR 54

Query: 93  ASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTM 152
             V + A            +I+ A   + P   +  +       N  G    T  LL+  
Sbjct: 55  DLVDELAKGVPD------AVIHLAAQSSVP-DSNASDPAEFLDVNVDG----TLNLLEAA 103

Query: 153 KKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKEL 212
           +    K     R V  SS +  +     +  D   D         YG SKLA     +  
Sbjct: 104 RAAGVK-----RFVFASSVSVVYGDPPPLPID--EDLGPPRPLNPYGVSKLAAEQLLRAY 156

Query: 213 AKHLKEDGVNITA 225
           A   +  G+ +  
Sbjct: 157 A---RLYGLPVVI 166

Length = 314

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 1/87 (1%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
            A V GA  G+G   AR  A  G  V +A R  A  + +   I+++   +   A+  D  
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSAK-AVPTDAR 59

Query: 91  SLASVRKFASEYNSQGRPLNILINNAG 117
               V         +  PL +L+ NAG
Sbjct: 60  DEDEVIALFDLIEEEIGPLEVLVYNAG 86

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 41.3 bits (97), Expect = 3e-04
 Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 5/100 (5%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G   ++ G +  +G   AR LA +G   +    N AA K   E  V  + +A   A+  
Sbjct: 7   KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAF 66

Query: 88  --DVSSLASVRK-FASEYNSQGRPLNILINNAG-IMASPF 123
             D+++ A+V K F     + GRP +I IN  G ++  P 
Sbjct: 67  QADLTTAAAVEKLFDDAKAAFGRP-DIAINTVGKVLKKPI 105

Length = 257

>gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase

 Score = 41.7 bits (98), Expect = 3e-04
 Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 20/126 (15%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAA--GKDVREAIVKEIPSAKVDAMELD 88
           T +V GA+  IG    R L  RG +V+   R  +   GK+ +E   KE+P A+V  +  D
Sbjct: 62  TVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEV--VFGD 119

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKD--NIELQFATNHL------- 139
           V+   S+RK      S+G P++++++    +AS     KD   I+ Q   N L       
Sbjct: 120 VTDADSLRKVL---FSEGDPVDVVVS---CLASRTGGVKDSWKIDYQATKNSLDAGREVG 173

Query: 140 -GHFLL 144
             HF+L
Sbjct: 174 AKHFVL 179

Length = 390

>gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional

 Score = 40.8 bits (96), Expect = 4e-04
 Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 9/89 (10%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
           TA++ GAS G+G      L  RG  V   VR        ++  ++ +P   ++ ++++  
Sbjct: 3   TALIIGASRGLGLGLVDRLLERGWQVTATVRGPQ-----QDTALQALPGVHIEKLDMN-- 55

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGIM 119
             AS+ +       QG+  ++L  NAGI 
Sbjct: 56  DPASLDQLLQRL--QGQRFDLLFVNAGIS 82

Length = 225

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 39.9 bits (94), Expect = 7e-04
 Identities = 25/125 (20%), Positives = 45/125 (36%), Gaps = 25/125 (20%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSS 91
            IV GA+  IG   A++L+  G  VI       AG+   +  V             D++ 
Sbjct: 1   IIVIGATGTIGLAVAQLLSAHGHEVI------TAGRSSGDYQV-------------DITD 41

Query: 92  LASVRKFASEYNSQGRPLNILINNAGI--MASPFMLSKDNIELQFATNHLGHFLLTHLLL 149
            AS++        +    + +++ AG    A    L+  + +    +  LG   L    L
Sbjct: 42  EASIKALF----EKVGHFDAIVSTAGDAEFAPLAELTDADFQRGLNSKLLGQINLVRHGL 97

Query: 150 DTMKK 154
             +  
Sbjct: 98  PYLND 102

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 40.2 bits (94), Expect = 8e-04
 Identities = 53/214 (24%), Positives = 82/214 (38%), Gaps = 31/214 (14%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL- 87
           G  A++TGA SGIG  TA   A  G  + +        +D  E +V+ I +    A+ L 
Sbjct: 55  GRKALITGADSGIGRATAIAFAREGADIALNYLP-EEEQDAAE-VVQLIQAEGRKAVALP 112

Query: 88  -DVSSLASVRKFASEYNSQGRPLNILINNAG---IMASPFMLSKDNIELQFATNHLGHFL 143
            D+   A  R+       +   L+IL+N AG    +     ++ +  +  F TN    F 
Sbjct: 113 GDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFW 172

Query: 144 LTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKL 203
           L    +  +   A        I+N  S               I       +   Y  +K 
Sbjct: 173 LCKAAIPHLPPGAS-------IINTGS---------------IQSYQPSPTLLDYASTKA 210

Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
           A +   K LAK + E G  I  N++ PG + T L
Sbjct: 211 AIVAFTKALAKQVAEKG--IRVNAVAPGPVWTPL 242

Length = 300

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 39.6 bits (93), Expect = 0.001
 Identities = 49/218 (22%), Positives = 79/218 (36%), Gaps = 38/218 (17%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G  A++TG  SGIG          G  V +  R+  A K    ++ +      V  +E 
Sbjct: 5   HGQVALITGGGSGIGRALVERFLAEGARVAVLERS--AEK--LASLRQRFG-DHVLVVEG 59

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGI---MASPFMLSKDNI-----ELQFATNHL 139
           DV+S A  ++   +       L+  + NAGI     S   +  + +     E+ F  N  
Sbjct: 60  DVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEI-FNVNVK 118

Query: 140 GHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYG 199
           G+ L     L  +K +       G ++   S +  +    G                 Y 
Sbjct: 119 GYLLGAKAALPALKAS------GGSMIFTLSNSSFYPGGGGP---------------LYT 157

Query: 200 QSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
            SK A +   ++LA  L      I  N + PG  VT+L
Sbjct: 158 ASKHAVVGLVRQLAYELAPK---IRVNGVAPGGTVTDL 192

Length = 263

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 39.0 bits (91), Expect = 0.001
 Identities = 49/211 (23%), Positives = 81/211 (38%), Gaps = 41/211 (19%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSS 91
           A++ GA+ GIG   AR LA RG  ++++ R+  A       +  E+ +    A   DV++
Sbjct: 1   ALILGATGGIGRALARALAGRGWRLLLSGRDAGA----LAGLAAEVGALARPA---DVAA 53

Query: 92  LASVRKFASEYNSQGRPLNILINNAG-IMASPFM-LSKDNIELQFATNHLG-HFLLTHLL 148
              V   A E      PL++L+  AG I+  P               N  G   +L H L
Sbjct: 54  ELEVWALAQELG----PLDLLVYAAGAILGKPLARTKPAAWRRILDANLTGAALVLKHAL 109

Query: 149 LDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILH 208
                  A       R+V +       AY E +               AY  +K A   +
Sbjct: 110 ---ALLAAG-----ARLVFLG------AYPELVMLPG---------LSAYAAAKAALEAY 146

Query: 209 AKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
            +   K ++  G+ +T   + P ++ T L+ 
Sbjct: 147 VEVARKEVR--GLRLTL--VRPPAVDTGLWA 173

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 39.4 bits (92), Expect = 0.001
 Identities = 63/246 (25%), Positives = 95/246 (38%), Gaps = 55/246 (22%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVD---AM 85
           G  A+VTG ++GIG    R+    G  V +       G++V +++  E           +
Sbjct: 18  GKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTV 77

Query: 86  ELDVSSL--ASVRKFASEYNSQGRPLNILINNAGIMASPFM----LSKDNIELQFATNHL 139
           E DVS     +V KF +        L+I++NNAG+   P      +     E  F  N  
Sbjct: 78  EDDVSRAVDFTVDKFGT--------LDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVK 129

Query: 140 GHFLLTHLLLDTMKKTAQK--SSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFG- 196
           G FL        MK  A+     ++G IV++ S A                 SA    G 
Sbjct: 130 GVFL-------GMKHAARIMIPLKKGSIVSLCSVA-----------------SAIGGLGP 165

Query: 197 -AYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLF--------RYNGILRGF 247
            AY  SK A +   + +A  L + G+ +  N + P ++ T L         R    L GF
Sbjct: 166 HAYTGSKHAVLGLTRSVAAELGKHGIRV--NCVSPYAVPTALALAHLPEDERTEDALAGF 223

Query: 248 CNTVGK 253
               GK
Sbjct: 224 RAFAGK 229

Length = 280

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 39.1 bits (92), Expect = 0.001
 Identities = 45/170 (26%), Positives = 65/170 (38%), Gaps = 49/170 (28%)

Query: 24  GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRN---MAAGK-------DVREAI 73
            +D TG   +VTG + GIG   AR     G  V++  R       G+       DVR+  
Sbjct: 1   NLDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPETVDGRPAEFHAADVRDP- 59

Query: 74  VKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDN---- 129
                  +V A+         V      +   GR L++L+NNAG   SP+ L+ +     
Sbjct: 60  ------DQVAAL---------VDAIVERH---GR-LDVLVNNAG--GSPYALAAEASPRF 98

Query: 130 ----IELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSE-AHR 174
               +EL    N L   L+       M    Q+    G IVN+ S    R
Sbjct: 99  HEKIVEL----NLLAPLLVAQAANAVM----QQQPGGGSIVNIGSVSGRR 140

Length = 252

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score = 38.7 bits (90), Expect = 0.002
 Identities = 62/209 (29%), Positives = 88/209 (42%), Gaps = 25/209 (11%)

Query: 25  IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDA 84
               G  A+VTGA+ GIG   A  L   G  V++A  +   G  V +A+ +   +A   A
Sbjct: 6   PGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGE---NAWFIA 62

Query: 85  MELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLL 144
           M  DV+  A V    +E   Q   L+ L+ NA I A P   + +++ L      L   L 
Sbjct: 63  M--DVADEAQVAAGVAEVLGQFGRLDALVCNAAI-ADPHNTTLESLSLAHWNRVLAVNLT 119

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
             +LL        ++   G IVN++S   R   SE        D  AY    A  +  L 
Sbjct: 120 GPMLLAKHCAPYLRAHN-GAIVNLAST--RARQSEP-------DTEAY----AASKGGLL 165

Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSI 233
            + HA  LA  L   G  I  N++ PG I
Sbjct: 166 ALTHA--LAISL---GPEIRVNAVSPGWI 189

Length = 255

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 37.7 bits (88), Expect = 0.003
 Identities = 15/64 (23%), Positives = 24/64 (37%), Gaps = 11/64 (17%)

Query: 34 VTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLA 93
          V GA+   G    + L  RG  V    RN             + P+  V  ++ D+  LA
Sbjct: 3  VIGATGKTGRRLVKELLARGHQVTALSRN-----------PSKAPAPGVTPVQKDLFDLA 51

Query: 94 SVRK 97
           + +
Sbjct: 52 DLAE 55

Length = 182

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 38.3 bits (89), Expect = 0.003
 Identities = 53/217 (24%), Positives = 82/217 (37%), Gaps = 31/217 (14%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
               A+VT ++ GIG   AR LA  G HV+++ R           +  E     V     
Sbjct: 9   ANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGE--GLSVTGTVC 66

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPF----MLSKDNI-ELQFATNHLGHF 142
            V       +  +   +    ++IL++NA +  +PF    + S + + +     N     
Sbjct: 67  HVGKAEDRERLVATAVNLHGGVDILVSNAAV--NPFFGNILDSTEEVWDKILDVNVKATA 124

Query: 143 LLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSK 202
           L+T  ++  M+K        G +V VSS A   A+              +   G Y  SK
Sbjct: 125 LMTKAVVPEMEKRGG-----GSVVIVSSVA---AF------------HPFPGLGPYNVSK 164

Query: 203 LANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
            A +   K LA  L     NI  N L PG I T+   
Sbjct: 165 TALLGLTKNLAPEL--APRNIRVNCLAPGLIKTSFSS 199

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 38.5 bits (90), Expect = 0.003
 Identities = 53/220 (24%), Positives = 81/220 (36%), Gaps = 38/220 (17%)

Query: 26  DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAM 85
              G  A++TG  SG+G          G  V +  R+       + A ++      V  +
Sbjct: 1   WLKGEVALITGGGSGLGRALVERFVAEGAKVAVLDRSAE-----KVAELRADFGDAVVGV 55

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGI---MASPFMLSKDNI-----ELQFATN 137
           E DV SLA   +  +    +   L+  I NAGI     S   + ++ +     EL F  N
Sbjct: 56  EGDVRSLADNERAVARCVERFGKLDCFIGNAGIWDYSTSLVDIPEEKLDEAFDEL-FHIN 114

Query: 138 HLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGA 197
             G+ L     L  +  T      EG ++   S A  +    G                 
Sbjct: 115 VKGYILGAKAALPALYAT------EGSVIFTVSNAGFYPGGGGP---------------L 153

Query: 198 YGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
           Y  SK A +   K+LA  L     +I  N + PG +VT+L
Sbjct: 154 YTASKHAVVGLVKQLAYEL---APHIRVNGVAPGGMVTDL 190

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 38.1 bits (88), Expect = 0.003
 Identities = 51/214 (23%), Positives = 86/214 (40%), Gaps = 33/214 (15%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVD--AMELDV 89
           A VTG   GIGT   + L   G  V   V         R   +++  +   D  A E +V
Sbjct: 6   AYVTGGMGGIGTSICQRLHKDGFKV---VAGCGPNSPRRVKWLEDQKALGFDFIASEGNV 62

Query: 90  SSLASVRKFASEYNSQGRPLNILINNAGIMASPFM--LSKDNIELQFATNHLGHFLLTHL 147
               S +    +  ++   +++L+NNAGI        +++++      TN    F +T  
Sbjct: 63  GDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQ 122

Query: 148 LLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANIL 207
           ++D M +        GRI+N+SS               +N +     FG    S     +
Sbjct: 123 VIDGMVERGW-----GRIINISS---------------VNGQKG--QFGQTNYSTAKAGI 160

Query: 208 HA--KELAKHLKEDGVNITANSLHPGSIVTNLFR 239
           H     LA+ +   GV  T N++ PG I T++ +
Sbjct: 161 HGFTMSLAQEVATKGV--TVNTVSPGYIGTDMVK 192

Length = 246

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 37.6 bits (88), Expect = 0.004
 Identities = 35/193 (18%), Positives = 63/193 (32%), Gaps = 32/193 (16%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSS 91
            +VTG +  IG+   R L   G  VI     +   +         I   + D  + D   
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEGYEVI----VLGRRRRSESLNTGRIRFHEGDLTDPD--- 53

Query: 92  LASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDT 151
             ++ +  +E        + +I+ A    S    S ++       N LG    T  LL+ 
Sbjct: 54  --ALERLLAEV-----QPDAVIHLAAQ--SGVGASFEDPADFIRANVLG----TLRLLEA 100

Query: 152 MKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKE 211
            ++   K     R V  SS +  +            +++       Y  +KLA     + 
Sbjct: 101 ARRAGVK-----RFVFASS-SEVYGDVADPPIT---EDTPLGPLSPYAAAKLAAERLVEA 151

Query: 212 LAKHLKEDGVNIT 224
            A   +  G+   
Sbjct: 152 YA---RAYGLRAV 161

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	313
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK08643	256	acetoin reductase; Validated	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
PRK12827	249	short chain dehydrogenase; Provisional	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK07060	245	short chain dehydrogenase; Provisional	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07074	257	short chain dehydrogenase; Provisional	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07577	234	short chain dehydrogenase; Provisional	100.0
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK06924	251	short chain dehydrogenase; Provisional	100.0
PRK06914	280	short chain dehydrogenase; Provisional	100.0
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12828	239	short chain dehydrogenase; Provisional	100.0
PRK09072	263	short chain dehydrogenase; Provisional	100.0
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	100.0
PRK10538	248	malonic semialdehyde reductase; Provisional	100.0
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08267	260	short chain dehydrogenase; Provisional	100.0
PRK07775	274	short chain dehydrogenase; Provisional	100.0
PRK07806	248	short chain dehydrogenase; Provisional	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
PRK09009	235	C factor cell-cell signaling protein; Provisional	100.0
COG1028	251	FabG Dehydrogenases with different specificities (	100.0
KOG1611	249	consensus Predicted short chain-type dehydrogenase	100.0
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07578	199	short chain dehydrogenase; Provisional	100.0
PRK08324	681	short chain dehydrogenase; Validated	100.0
PRK07041	230	short chain dehydrogenase; Provisional	100.0
PRK12829	264	short chain dehydrogenase; Provisional	99.98
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.98
PRK09135	249	pteridine reductase; Provisional	99.98
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.98
PRK05693	274	short chain dehydrogenase; Provisional	99.98
PRK07102	243	short chain dehydrogenase; Provisional	99.98
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.98
PRK06181	263	short chain dehydrogenase; Provisional	99.97
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.97
PRK07326	237	short chain dehydrogenase; Provisional	99.97
PRK06482	276	short chain dehydrogenase; Provisional	99.97
PRK07201	657	short chain dehydrogenase; Provisional	99.97
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.97
PRK07023	243	short chain dehydrogenase; Provisional	99.97
PRK06101	240	short chain dehydrogenase; Provisional	99.97
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.97
PRK08177	225	short chain dehydrogenase; Provisional	99.97
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.96
PRK09291	257	short chain dehydrogenase; Provisional	99.96
PRK08264	238	short chain dehydrogenase; Validated	99.96
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.96
PRK12367	245	short chain dehydrogenase; Provisional	99.96
PRK08017	256	oxidoreductase; Provisional	99.96
PRK06953	222	short chain dehydrogenase; Provisional	99.96
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.95
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.95
PRK08219	227	short chain dehydrogenase; Provisional	99.95
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.93
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.93
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.91
PLN03209	576	translocon at the inner envelope of chloroplast su	99.9
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.89
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.89
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.89
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.88
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.87
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.86
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.86
PLN02583	297	cinnamoyl-CoA reductase	99.84
PLN02653	340	GDP-mannose 4,6-dehydratase	99.84
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.84
PRK06720	169	hypothetical protein; Provisional	99.83
PLN02650	351	dihydroflavonol-4-reductase	99.83
PLN02214	342	cinnamoyl-CoA reductase	99.83
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.82
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.82
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.81
PLN02240	352	UDP-glucose 4-epimerase	99.8
PLN02572	442	UDP-sulfoquinovose synthase	99.79
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.78
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.78
PLN00198	338	anthocyanidin reductase; Provisional	99.77
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.77
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.77
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.75
PLN02686	367	cinnamoyl-CoA reductase	99.74
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.74
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.74
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.74
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.73
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.73
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.71
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.7
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.7
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.69
PLN02427	386	UDP-apiose/xylose synthase	99.67
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.67
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.64
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.63
PLN02260	668	probable rhamnose biosynthetic enzyme	99.63
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.63
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.62
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.62
PLN02206	442	UDP-glucuronate decarboxylase	99.61
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.6
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.56
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.56
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.54
CHL00194	317	ycf39 Ycf39; Provisional	99.54
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.51
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.5
PRK07201	657	short chain dehydrogenase; Provisional	99.47
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.46
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.46
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.45
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.45
PLN02778	298	3,5-epimerase/4-reductase	99.4
PLN02996	491	fatty acyl-CoA reductase	99.4
PRK08309	177	short chain dehydrogenase; Provisional	99.34
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.33
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.3
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.29
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.28
PRK05865	854	hypothetical protein; Provisional	99.25
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.24
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.23
PLN02260	668	probable rhamnose biosynthetic enzyme	99.23
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.22
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.22
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.21
PLN02503	605	fatty acyl-CoA reductase 2	99.2
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.17
PLN00016	378	RNA-binding protein; Provisional	99.08
PRK12320	699	hypothetical protein; Provisional	99.06
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.05
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.03
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.98
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.97
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	98.88
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.84
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.81
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.8
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.73
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.67
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.56
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.55
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.49
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.44
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.34
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.33
PLN00106	323	malate dehydrogenase	98.32
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.27
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.25
PRK09620	229	hypothetical protein; Provisional	98.22
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.2
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.18
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.17
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.17
PTZ00325	321	malate dehydrogenase; Provisional	98.14
COG2910	211	Putative NADH-flavin reductase [General function p	98.14
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.05
PRK14982	340	acyl-ACP reductase; Provisional	98.05
KOG2774	366	consensus NAD dependent epimerase [General functio	98.02
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.94
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.83
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.77
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.77
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	97.76
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.7
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.69
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.67
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.65
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.64
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.61
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.58
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.53
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.52
COG3268	382	Uncharacterized conserved protein [Function unknow	97.49
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.48
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.46
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.44
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.44
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.43
PRK05086	312	malate dehydrogenase; Provisional	97.42
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.42
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.42
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.41
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.39
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.38
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.36
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.34
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	97.34
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	97.33
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.33
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	97.32
PRK06849	389	hypothetical protein; Provisional	97.31
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.31
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.3
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	97.27
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	97.27
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	97.2
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	97.2
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.2
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.19
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	97.19
PRK14968	188	putative methyltransferase; Provisional	97.17
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	97.13
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.1
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.1
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	97.08
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.07
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	97.03
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.01
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	97.0
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.99
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.97
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.92
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.92
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.92
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.92
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.88
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.88
PRK08223	287	hypothetical protein; Validated	96.87
PTZ00117	319	malate dehydrogenase; Provisional	96.84
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	96.84
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.84
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.8
PRK08328	231	hypothetical protein; Provisional	96.78
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.78
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.78
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.76
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.75
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.75
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.72
PRK04148	134	hypothetical protein; Provisional	96.72
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.71
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.7
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	96.69
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.69
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	96.69
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.67
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.66
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.66
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.65
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.65
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	96.65
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.61
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.6
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.59
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.59
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.59
PTZ00075	476	Adenosylhomocysteinase; Provisional	96.49
PLN00112	444	malate dehydrogenase (NADP); Provisional	96.48
PLN02494	477	adenosylhomocysteinase	96.48
PRK14851	679	hypothetical protein; Provisional	96.46
PLN02602	350	lactate dehydrogenase	96.43
PRK09496	453	trkA potassium transporter peripheral membrane com	96.42
PTZ00082	321	L-lactate dehydrogenase; Provisional	96.42
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	96.41
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.4
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.39
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	96.39
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.38
PRK07877	722	hypothetical protein; Provisional	96.38
PLN00203	519	glutamyl-tRNA reductase	96.35
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.34
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	96.34
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	96.31
PRK14967	223	putative methyltransferase; Provisional	96.27
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.27
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.26
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	96.24
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	96.22
PRK05442	326	malate dehydrogenase; Provisional	96.21
PRK07411	390	hypothetical protein; Validated	96.2
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	96.2
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.18
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.14
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	96.12
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	96.08
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	96.07
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.06
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	96.06
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	96.04
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.04
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.03
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.01
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	96.01
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	96.01
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.0
cd01488	291	Uba3_RUB Ubiquitin activating enzyme (E1) subunit	95.99
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	95.98
PRK14852	989	hypothetical protein; Provisional	95.96
TIGR01381	664	E1_like_apg7 E1-like protein-activating enzyme Gsa	95.96
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.96
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	95.96
PRK06223	307	malate dehydrogenase; Reviewed	95.94
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.93
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	95.92
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	95.92
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	95.9
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	95.88
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	95.85
PLN02928	347	oxidoreductase family protein	95.84
cd01486	307	Apg7 Apg7 is an E1-like protein, that activates tw	95.82
PRK08655	437	prephenate dehydrogenase; Provisional	95.81
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	95.8
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	95.8
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.79
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.78
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.78
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	95.78
PRK09496	453	trkA potassium transporter peripheral membrane com	95.78
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	95.77
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	95.76
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	95.7
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.69
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.66
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	95.63
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	95.62
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	95.61
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	95.59
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	95.58
PLN02740	381	Alcohol dehydrogenase-like	95.55
PLN02586	360	probable cinnamyl alcohol dehydrogenase	95.54
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	95.53
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	95.53
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	95.51
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	95.44
PTZ00354	334	alcohol dehydrogenase; Provisional	95.43
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	95.41
TIGR00537	179	hemK_rel_arch HemK-related putative methylase. The	95.4
PF13659	117	Methyltransf_26: Methyltransferase domain; PDB: 3G	95.39
COG2263	198	Predicted RNA methylase [Translation, ribosomal st	95.34
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.33
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.33
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	95.32
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	95.3
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	95.29
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	95.27
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	95.26
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	95.17
PLN02178	375	cinnamyl-alcohol dehydrogenase	95.15
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.12
PRK12480	330	D-lactate dehydrogenase; Provisional	95.09

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.2e-44  Score=324.40  Aligned_cols=285  Identities=53%  Similarity=0.784  Sum_probs=259.0

Q ss_pred             CccchhccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHH
Q 021391           16 STAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASV   95 (313)
Q Consensus        16 ~~~~~~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v   95 (313)
                      ..........++.|++++||||++|||+++|++||.+|++|++++||.++.+++.++|....+...+.++++|+++.++|
T Consensus        22 ~~~~~~~~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV  101 (314)
T KOG1208|consen   22 TTALEVTHGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSV  101 (314)
T ss_pred             eecceeeccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHH
Confidence            44466778899999999999999999999999999999999999999999999999999877778899999999999999


Q ss_pred             HHHHHHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccc
Q 021391           96 RKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRF  175 (313)
Q Consensus        96 ~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~  175 (313)
                      .++++++.+.++++|++|||||++.++...+.|+++..+.+|+.|++.|++.++|.|+++     ..+|||++||..+  
T Consensus       102 ~~fa~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s-----~~~RIV~vsS~~~--  174 (314)
T KOG1208|consen  102 RKFAEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRS-----APSRIVNVSSILG--  174 (314)
T ss_pred             HHHHHHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhC-----CCCCEEEEcCccc--
Confidence            999999999999999999999999888888999999999999999999999999999984     3589999999988  


Q ss_pred             cccCCCCCCCCCCCCC--CCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccC-CccccchhHhHHHHHH
Q 021391          176 AYSEGIRFDKINDESA--YNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTN-LFRYNGILRGFCNTVG  252 (313)
Q Consensus       176 ~~~~~~~~~~~~~~~~--~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~-~~~~~~~~~~~~~~~~  252 (313)
                        ....++++++.+..  |+...+|+.||.+...+++.|++++.+ |  |.+++++||.+.|+ +.+...+.+.+...+.
T Consensus       175 --~~~~~~~~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~--V~~~~~hPG~v~t~~l~r~~~~~~~l~~~l~  249 (314)
T KOG1208|consen  175 --GGKIDLKDLSGEKAKLYSSDAAYALSKLANVLLANELAKRLKK-G--VTTYSVHPGVVKTTGLSRVNLLLRLLAKKLS  249 (314)
T ss_pred             --cCccchhhccchhccCccchhHHHHhHHHHHHHHHHHHHHhhc-C--ceEEEECCCcccccceecchHHHHHHHHHHH
Confidence              23457788888776  888888999999999999999999998 7  99999999999999 5553445555677777


Q ss_pred             HhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCCccCCCHHHHHHHHHHHHhhh
Q 021391          253 KLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMELAKKLWDFSMNLV  312 (313)
Q Consensus       253 ~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (313)
                      ..+..++++.|++.++++.+|+...++|.|+.+.....++....|++.++++|+.+++++
T Consensus       250 ~~~~ks~~~ga~t~~~~a~~p~~~~~sg~y~~d~~~~~~~~~a~d~~~~~~lw~~s~~l~  309 (314)
T KOG1208|consen  250 WPLTKSPEQGAATTCYAALSPELEGVSGKYFEDCAIAEPSEEALDEELAEKLWKFSEELI  309 (314)
T ss_pred             HHhccCHHHHhhheehhccCccccCccccccccccccccccccCCHHHHHHHHHHHHHHh
Confidence            777789999999999999999999999999999999999999999999999999999875

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=2e-45  Score=298.22  Aligned_cols=239  Identities=24%  Similarity=0.239  Sum_probs=215.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      +..|.++||||++|||++++..|+++|++|++.+++...+++....|..   ......+.||++++.+++.+++++.+.+
T Consensus        12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g---~~~h~aF~~DVS~a~~v~~~l~e~~k~~   88 (256)
T KOG1200|consen   12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGG---YGDHSAFSCDVSKAHDVQNTLEEMEKSL   88 (256)
T ss_pred             HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCC---CCccceeeeccCcHHHHHHHHHHHHHhc
Confidence            5669999999999999999999999999999999999888887776632   1357788999999999999999999999


Q ss_pred             CCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCC
Q 021391          107 RPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFD  184 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  184 (313)
                      |++++||||||+....+  ..+.++|++.+.+|+.|.|+++|++...|..+.   +++.+||++||+.+..+..      
T Consensus        89 g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~---~~~~sIiNvsSIVGkiGN~------  159 (256)
T KOG1200|consen   89 GTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQ---QQGLSIINVSSIVGKIGNF------  159 (256)
T ss_pred             CCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhc---CCCceEEeehhhhcccccc------
Confidence            99999999999988765  788999999999999999999999999976642   4456999999999999877      


Q ss_pred             CCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHHHHHHhhcCChHHH
Q 021391          185 KINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCNTVGKLVLKNIPQG  262 (313)
Q Consensus       185 ~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~ev  262 (313)
                               ++..|+++|.++.+|+++.|+|++.++  ||||.|+||+|.|||....+  ....+...+|..++..+||+
T Consensus       160 ---------GQtnYAAsK~GvIgftktaArEla~kn--IrvN~VlPGFI~tpMT~~mp~~v~~ki~~~iPmgr~G~~Eev  228 (256)
T KOG1200|consen  160 ---------GQTNYAASKGGVIGFTKTAARELARKN--IRVNVVLPGFIATPMTEAMPPKVLDKILGMIPMGRLGEAEEV  228 (256)
T ss_pred             ---------cchhhhhhcCceeeeeHHHHHHHhhcC--ceEeEeccccccChhhhhcCHHHHHHHHccCCccccCCHHHH
Confidence                     789999999999999999999999999  99999999999999988763  55677888899999999999


Q ss_pred             HHHHHHHHccCCccCCCceeecCCccc
Q 021391          263 AATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       263 a~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      |+.++||++ |.++|+||+.+.++|+.
T Consensus       229 A~~V~fLAS-~~ssYiTG~t~evtGGl  254 (256)
T KOG1200|consen  229 ANLVLFLAS-DASSYITGTTLEVTGGL  254 (256)
T ss_pred             HHHHHHHhc-cccccccceeEEEeccc
Confidence            999999997 99999999999987754

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-44  Score=319.81  Aligned_cols=245  Identities=23%  Similarity=0.214  Sum_probs=209.8

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      ..++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.... +.++.++.+|++|+++++++++++
T Consensus         2 ~~~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~   80 (263)
T PRK08339          2 LKIDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSES-NVDVSYIVADLTKREDLERTVKEL   80 (263)
T ss_pred             CccCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHHH
Confidence            4567899999999999999999999999999999999999988888777776542 357889999999999999999998


Q ss_pred             hhcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          103 NSQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      . ++|++|++|||+|.....  .+.+.++|++++++|+.+++.++++++|.|.+     ++.|+||++||.++..+.+  
T Consensus        81 ~-~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~-----~~~g~Ii~isS~~~~~~~~--  152 (263)
T PRK08339         81 K-NIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMER-----KGFGRIIYSTSVAIKEPIP--  152 (263)
T ss_pred             H-hhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-----cCCCEEEEEcCccccCCCC--
Confidence            5 589999999999975432  27788999999999999999999999999987     4468999999998877665  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-------------chhHhH
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-------------GILRGF  247 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-------------~~~~~~  247 (313)
                                   ....|+++|+|+++|+++++.|++++|  ||||+|+||+++|++....             ...+.+
T Consensus       153 -------------~~~~y~asKaal~~l~~~la~el~~~g--IrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  217 (263)
T PRK08339        153 -------------NIALSNVVRISMAGLVRTLAKELGPKG--ITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEY  217 (263)
T ss_pred             -------------cchhhHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHH
Confidence                         677899999999999999999999999  9999999999999975421             111122


Q ss_pred             HHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCC
Q 021391          248 CNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPN  292 (313)
Q Consensus       248 ~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~  292 (313)
                      ....+..+..+|+|+|++++||++ +.+.++||+++.+||+...+
T Consensus       218 ~~~~p~~r~~~p~dva~~v~fL~s-~~~~~itG~~~~vdgG~~~~  261 (263)
T PRK08339        218 AKPIPLGRLGEPEEIGYLVAFLAS-DLGSYINGAMIPVDGGRLNS  261 (263)
T ss_pred             hccCCcccCcCHHHHHHHHHHHhc-chhcCccCceEEECCCcccc
Confidence            334456678899999999999998 78899999999988876554

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-44  Score=325.58  Aligned_cols=266  Identities=19%  Similarity=0.205  Sum_probs=216.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc----------hhHHHHHHHHHHhCCCCceEEEEccCCCHHH
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM----------AAGKDVREAIVKEIPSAKVDAMELDVSSLAS   94 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~----------~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~   94 (313)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.          +.+++..+++...  +.++.++++|++++++
T Consensus         4 ~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~   81 (305)
T PRK08303          4 KPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA--GGRGIAVQVDHLVPEQ   81 (305)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhc--CCceEEEEcCCCCHHH
Confidence            558999999999999999999999999999999999984          3455555555443  4567889999999999


Q ss_pred             HHHHHHHHhhcCCCeeEEEEcc-cCCC-----CCC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEE
Q 021391           95 VRKFASEYNSQGRPLNILINNA-GIMA-----SPF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVN  167 (313)
Q Consensus        95 v~~~~~~~~~~~g~id~lv~~a-g~~~-----~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~  167 (313)
                      ++++++++.+.+|+||++|||+ |...     .+. +.+.++|++.+++|+.+++.++++++|+|.+     +.+|+||+
T Consensus        82 v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~-----~~~g~IV~  156 (305)
T PRK08303         82 VRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIR-----RPGGLVVE  156 (305)
T ss_pred             HHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhh-----CCCcEEEE
Confidence            9999999999999999999999 7531     222 6677889999999999999999999999987     34689999


Q ss_pred             ECCccccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-----c
Q 021391          168 VSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-----G  242 (313)
Q Consensus       168 isS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-----~  242 (313)
                      +||..+.....            .+.....|++||+|+.+|+++|+.|++++|  ||||+|+||+++|++....     .
T Consensus       157 isS~~~~~~~~------------~~~~~~~Y~asKaal~~lt~~La~el~~~g--IrVn~v~PG~v~T~~~~~~~~~~~~  222 (305)
T PRK08303        157 ITDGTAEYNAT------------HYRLSVFYDLAKTSVNRLAFSLAHELAPHG--ATAVALTPGWLRSEMMLDAFGVTEE  222 (305)
T ss_pred             ECCccccccCc------------CCCCcchhHHHHHHHHHHHHHHHHHhhhcC--cEEEEecCCccccHHHHHhhccCcc
Confidence            99976543211            011456799999999999999999999999  9999999999999975321     0


Q ss_pred             hhHhHHHHHH-HhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCCccCCCHHHHHHHHHHHHhh
Q 021391          243 ILRGFCNTVG-KLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMELAKKLWDFSMNL  311 (313)
Q Consensus       243 ~~~~~~~~~~-~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (313)
                      .........+ ..+..+|+|+|+.++||++.+...++||+++.+.....+.+..++.+.++.||+++++.
T Consensus       223 ~~~~~~~~~p~~~~~~~peevA~~v~fL~s~~~~~~itG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (305)
T PRK08303        223 NWRDALAKEPHFAISETPRYVGRAVAALAADPDVARWNGQSLSSGQLARVYGFTDLDGSRPDAWRYLVEV  292 (305)
T ss_pred             chhhhhccccccccCCCHHHHHHHHHHHHcCcchhhcCCcEEEhHHHHHhcCccCCCCCCCcchhhhhhc
Confidence            0111111223 24456899999999999983335699999999999999999999999999999999875

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.1e-43  Score=311.35  Aligned_cols=236  Identities=17%  Similarity=0.148  Sum_probs=199.9

Q ss_pred             CCCCCCEEEEeCCC--CchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           25 IDGTGLTAIVTGAS--SGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        25 ~~~~gk~~lItGas--~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      ..++||++|||||+  +|||+++|++|+++|++|++++|+. ..++..+++.    +.++.++++|++|+++++++++++
T Consensus         3 ~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~   77 (252)
T PRK06079          3 GILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV----DEEDLLVECDVASDESIERAFATI   77 (252)
T ss_pred             cccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc----cCceeEEeCCCCCHHHHHHHHHHH
Confidence            34789999999999  8999999999999999999999983 4444333332    236788999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCC-----CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccc
Q 021391          103 NSQGRPLNILINNAGIMAS-----PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFA  176 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~-----~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~  176 (313)
                      .+++|++|+||||||+...     +. +.+.++|++.+++|+.+++.+++.++|+|.+       +|+||++||.++..+
T Consensus        78 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~-------~g~Iv~iss~~~~~~  150 (252)
T PRK06079         78 KERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP-------GASIVTLTYFGSERA  150 (252)
T ss_pred             HHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc-------CceEEEEeccCcccc
Confidence            9999999999999997642     22 6788999999999999999999999999864       589999999988766


Q ss_pred             ccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----chhHhHHHHHH
Q 021391          177 YSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----GILRGFCNTVG  252 (313)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~  252 (313)
                      .+               .+.+|++||+|+++|+++++.|++++|  ||||+|+||+++|++....    +..+......+
T Consensus       151 ~~---------------~~~~Y~asKaal~~l~~~la~el~~~g--I~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p  213 (252)
T PRK06079        151 IP---------------NYNVMGIAKAALESSVRYLARDLGKKG--IRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTV  213 (252)
T ss_pred             CC---------------cchhhHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCcccccccccCCChHHHHHHHHhcCc
Confidence            55               678899999999999999999999999  9999999999999976432    11222333445


Q ss_pred             HhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          253 KLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       253 ~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      ..+..+|+|+|++++||++ +.+.++||+++..||+..
T Consensus       214 ~~r~~~pedva~~~~~l~s-~~~~~itG~~i~vdgg~~  250 (252)
T PRK06079        214 DGVGVTIEEVGNTAAFLLS-DLSTGVTGDIIYVDKGVH  250 (252)
T ss_pred             ccCCCCHHHHHHHHHHHhC-cccccccccEEEeCCcee
Confidence            5678899999999999998 889999999999887654

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.2e-43  Score=313.53  Aligned_cols=242  Identities=18%  Similarity=0.184  Sum_probs=200.7

Q ss_pred             CCCCCCEEEEeCCC--CchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           25 IDGTGLTAIVTGAS--SGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        25 ~~~~gk~~lItGas--~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      |.++||++|||||+  +|||+++|++|+++|++|++++|+.+ .++..+++..+.+ .. .++++|++|.++++++++++
T Consensus         1 ~~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~-~~-~~~~~Dv~d~~~v~~~~~~i   77 (274)
T PRK08415          1 MIMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELG-SD-YVYELDVSKPEHFKSLAESL   77 (274)
T ss_pred             CccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcC-Cc-eEEEecCCCHHHHHHHHHHH
Confidence            45789999999997  89999999999999999999999853 2333444544332 23 67899999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCC-----C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccc
Q 021391          103 NSQGRPLNILINNAGIMAS-----P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFA  176 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~-----~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~  176 (313)
                      .+++|++|+||||||+...     + .+.+.++|++++++|+.+++++++.++|.|.+       +|+||++||.++..+
T Consensus        78 ~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~-------~g~Iv~isS~~~~~~  150 (274)
T PRK08415         78 KKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND-------GASVLTLSYLGGVKY  150 (274)
T ss_pred             HHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc-------CCcEEEEecCCCccC
Confidence            9999999999999998532     2 26788999999999999999999999999965       589999999888766


Q ss_pred             ccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc-hh--HhH-HHHHH
Q 021391          177 YSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG-IL--RGF-CNTVG  252 (313)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~-~~--~~~-~~~~~  252 (313)
                      .|               .+..|++||+|+++|+++++.|++++|  ||||+|+||+++|++..... +.  ..+ ....+
T Consensus       151 ~~---------------~~~~Y~asKaal~~l~~~la~el~~~g--IrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p  213 (274)
T PRK08415        151 VP---------------HYNVMGVAKAALESSVRYLAVDLGKKG--IRVNAISAGPIKTLAASGIGDFRMILKWNEINAP  213 (274)
T ss_pred             CC---------------cchhhhhHHHHHHHHHHHHHHHhhhcC--eEEEEEecCccccHHHhccchhhHHhhhhhhhCc
Confidence            55               677899999999999999999999999  99999999999998754321 11  111 12345


Q ss_pred             HhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCCcc
Q 021391          253 KLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQ  294 (313)
Q Consensus       253 ~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~~  294 (313)
                      ..+..+|+|+|++++||++ +.+.++||+.+.+||+....+.
T Consensus       214 l~r~~~pedva~~v~fL~s-~~~~~itG~~i~vdGG~~~~~~  254 (274)
T PRK08415        214 LKKNVSIEEVGNSGMYLLS-DLSSGVTGEIHYVDAGYNIMGM  254 (274)
T ss_pred             hhccCCHHHHHHHHHHHhh-hhhhcccccEEEEcCcccccCC
Confidence            6678899999999999998 7889999999998877654433

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.1e-42  Score=311.14  Aligned_cols=239  Identities=16%  Similarity=0.180  Sum_probs=199.1

Q ss_pred             CCCCCEEEEeCCCC--chHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           26 DGTGLTAIVTGASS--GIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        26 ~~~gk~~lItGas~--giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .|+||++|||||++  |||+++|++|+++|++|++++|+.+..+. .+++..+. + ...++++|++|+++++++++++.
T Consensus         4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~-~~~~~~~~-g-~~~~~~~Dv~d~~~v~~~~~~~~   80 (271)
T PRK06505          4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKR-VKPLAESL-G-SDFVLPCDVEDIASVDAVFEALE   80 (271)
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHH-HHHHHHhc-C-CceEEeCCCCCHHHHHHHHHHHH
Confidence            37899999999997  99999999999999999999998643333 34443332 2 23578999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCC-----CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccc
Q 021391          104 SQGRPLNILINNAGIMAS-----PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAY  177 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~-----~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~  177 (313)
                      +++|++|+||||||+...     +. +.+.++|++.+++|+.++++++|+++|+|.+       +|+||++||.++..+.
T Consensus        81 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~-------~G~Iv~isS~~~~~~~  153 (271)
T PRK06505         81 KKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD-------GGSMLTLTYGGSTRVM  153 (271)
T ss_pred             HHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc-------CceEEEEcCCCccccC
Confidence            999999999999997642     22 6788999999999999999999999999964       5899999999887766


Q ss_pred             cCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccch----hHhHHHHHHH
Q 021391          178 SEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI----LRGFCNTVGK  253 (313)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~----~~~~~~~~~~  253 (313)
                      |               .+.+|++||+|+++|+|+|+.|++++|  ||||+|+||+++|++......    ........+.
T Consensus       154 ~---------------~~~~Y~asKaAl~~l~r~la~el~~~g--IrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~  216 (271)
T PRK06505        154 P---------------NYNVMGVAKAALEASVRYLAADYGPQG--IRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPL  216 (271)
T ss_pred             C---------------ccchhhhhHHHHHHHHHHHHHHHhhcC--eEEEEEecCCccccccccCcchHHHHHHHhhcCCc
Confidence            6               677899999999999999999999999  999999999999997543211    1112223455


Q ss_pred             hhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCC
Q 021391          254 LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPN  292 (313)
Q Consensus       254 ~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~  292 (313)
                      .+..+|+|+|++++||++ +.+.++||+.+.+||+....
T Consensus       217 ~r~~~peeva~~~~fL~s-~~~~~itG~~i~vdgG~~~~  254 (271)
T PRK06505        217 RRTVTIDEVGGSALYLLS-DLSSGVTGEIHFVDSGYNIV  254 (271)
T ss_pred             cccCCHHHHHHHHHHHhC-ccccccCceEEeecCCcccC
Confidence            667899999999999998 78899999999988776543

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8e-42  Score=311.53  Aligned_cols=278  Identities=36%  Similarity=0.523  Sum_probs=228.3

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      ...+++||+++||||++|||+++|++|+++|++|++++|+.++.++..+++....++.++.++.+|++|.++++++++++
T Consensus         8 ~~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~   87 (313)
T PRK05854          8 TVPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQL   87 (313)
T ss_pred             cCcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHH
Confidence            34568999999999999999999999999999999999999999998888877666667899999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCCCC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          103 NSQGRPLNILINNAGIMASPF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      .++++++|+||||||+...+. +.+.++++.++++|+.+++.+++.++|.|.+     . .++||++||.++..+   ..
T Consensus        88 ~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~-----~-~~riv~vsS~~~~~~---~~  158 (313)
T PRK05854         88 RAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRA-----G-RARVTSQSSIAARRG---AI  158 (313)
T ss_pred             HHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHh-----C-CCCeEEEechhhcCC---Cc
Confidence            999999999999999876544 5788999999999999999999999999976     2 579999999987654   23


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhc--cCCCcEEEEEeeCcccccCCccccc--------hhHhHHHHH
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLK--EDGVNITANSLHPGSIVTNLFRYNG--------ILRGFCNTV  251 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~--~~g~~I~vn~i~PG~v~t~~~~~~~--------~~~~~~~~~  251 (313)
                      ++.++.....+++...|+.||+|++.+++.|+.++.  ..|  |+||+|+||+++|++.....        +...+....
T Consensus       159 ~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~g--I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  236 (313)
T PRK05854        159 NWDDLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWG--ITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSL  236 (313)
T ss_pred             CcccccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCC--eEEEEEecceeccCccccccccccchhHHHHHHHHHH
Confidence            556666667778888999999999999999998754  456  99999999999999865321        111111111


Q ss_pred             H--HhhcCChHHHHHHHHHHHccCCccCCCceeecCCcc---------cCCCccCCCHHHHHHHHHHHHhhhC
Q 021391          252 G--KLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNI---------YKPNSQGQNMELAKKLWDFSMNLVK  313 (313)
Q Consensus       252 ~--~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~  313 (313)
                      .  .....++++.|...++++.++..  .+|.|+.+.+.         ..++....|++.+++||++++++++
T Consensus       237 ~~~~~~~~~~~~ga~~~l~~a~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~lw~~s~~~~~  307 (313)
T PRK05854        237 SARGFLVGTVESAILPALYAATSPDA--EGGAFYGPRGPGELGGGPVEQALYPPLRRNAEAARLWEVSEQLTG  307 (313)
T ss_pred             hhcccccCCHHHHHHHhhheeeCCCC--CCCcEECCCcccccCCCcccCCCCcccCCHHHHHHHHHHHHHHHC
Confidence            1  11356899999999999986654  36998887542         2344556899999999999999864

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=2.5e-42  Score=292.77  Aligned_cols=229  Identities=27%  Similarity=0.315  Sum_probs=200.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      .+++|+++|||||+|||.++|++|+++|++|++++|+.++++++.+++.+    ..+..+.+|++|.++++++++.+.++
T Consensus         3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~----~~~~~~~~DVtD~~~~~~~i~~~~~~   78 (246)
T COG4221           3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA----GAALALALDVTDRAAVEAAIEALPEE   78 (246)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc----CceEEEeeccCCHHHHHHHHHHHHHh
Confidence            46789999999999999999999999999999999999999998888743    47899999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          106 GRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      ++++|+||||||..... . +.+.++|++++++|+.|.++.+++++|.|.+     ++.|.||++||++|..++|     
T Consensus        79 ~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~-----r~~G~IiN~~SiAG~~~y~-----  148 (246)
T COG4221          79 FGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVE-----RKSGHIINLGSIAGRYPYP-----  148 (246)
T ss_pred             hCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHh-----cCCceEEEeccccccccCC-----
Confidence            99999999999987653 2 7899999999999999999999999999999     5688999999999999888     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchh---HhHHHHHHHhhcCChH
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGIL---RGFCNTVGKLVLKNIP  260 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~  260 (313)
                                +...|+++|+++..|.+.|..|+..++  |||.+|+||.+.|.......+.   ....+........+|+
T Consensus       149 ----------~~~vY~ATK~aV~~fs~~LR~e~~g~~--IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~~~~~l~p~  216 (246)
T COG4221         149 ----------GGAVYGATKAAVRAFSLGLRQELAGTG--IRVTVISPGLVETTEFSTVRFEGDDERADKVYKGGTALTPE  216 (246)
T ss_pred             ----------CCccchhhHHHHHHHHHHHHHHhcCCC--eeEEEecCceecceecccccCCchhhhHHHHhccCCCCCHH
Confidence                      778999999999999999999999888  9999999999977655544322   2222223344578999


Q ss_pred             HHHHHHHHHHccCCccCCCc
Q 021391          261 QGAATTCYVALHPQVQGVSG  280 (313)
Q Consensus       261 eva~~~~~l~~~~~~~~~tG  280 (313)
                      ++|+++.|.++.|+.--++=
T Consensus       217 dIA~~V~~~~~~P~~vnI~e  236 (246)
T COG4221         217 DIAEAVLFAATQPQHVNINE  236 (246)
T ss_pred             HHHHHHHHHHhCCCccccce
Confidence            99999999999776554443

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.4e-42  Score=308.59  Aligned_cols=239  Identities=18%  Similarity=0.177  Sum_probs=200.1

Q ss_pred             CCCCCEEEEeCCCC--chHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           26 DGTGLTAIVTGASS--GIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        26 ~~~gk~~lItGas~--giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .++||++|||||++  |||+++|++|+++|++|++++|+. ..++..+++..+. + ...++++|++|+++++++++++.
T Consensus         5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~-g-~~~~~~~Dv~~~~~v~~~~~~~~   81 (260)
T PRK06603          5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEI-G-CNFVSELDVTNPKSISNLFDDIK   81 (260)
T ss_pred             ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhc-C-CceEEEccCCCHHHHHHHHHHHH
Confidence            36899999999998  999999999999999999999884 4445556665543 2 23467999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCC------CCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccc
Q 021391          104 SQGRPLNILINNAGIMAS------PFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAY  177 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~  177 (313)
                      +++|++|+||||+|+...      ..+.+.++|++.+++|+.+++.+++.+.|+|.+       +|+||++||..+..+.
T Consensus        82 ~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~-------~G~Iv~isS~~~~~~~  154 (260)
T PRK06603         82 EKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD-------GGSIVTLTYYGAEKVI  154 (260)
T ss_pred             HHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc-------CceEEEEecCccccCC
Confidence            999999999999997531      226788999999999999999999999999964       5899999998887665


Q ss_pred             cCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----hhHhHHHHHHH
Q 021391          178 SEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----ILRGFCNTVGK  253 (313)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----~~~~~~~~~~~  253 (313)
                      +               .+.+|++||+|+++|+++++.|++++|  ||||+|+||+++|++.....    .........+.
T Consensus       155 ~---------------~~~~Y~asKaal~~l~~~la~el~~~g--IrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~  217 (260)
T PRK06603        155 P---------------NYNVMGVAKAALEASVKYLANDMGENN--IRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPL  217 (260)
T ss_pred             C---------------cccchhhHHHHHHHHHHHHHHHhhhcC--eEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCc
Confidence            5               678899999999999999999999999  99999999999999754221    11222333455


Q ss_pred             hhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCC
Q 021391          254 LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPN  292 (313)
Q Consensus       254 ~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~  292 (313)
                      .+..+|+|+|++++||++ +.+.++||+.+.+||+....
T Consensus       218 ~r~~~pedva~~~~~L~s-~~~~~itG~~i~vdgG~~~~  255 (260)
T PRK06603        218 KRNTTQEDVGGAAVYLFS-ELSKGVTGEIHYVDCGYNIM  255 (260)
T ss_pred             CCCCCHHHHHHHHHHHhC-cccccCcceEEEeCCccccc
Confidence            677899999999999998 88899999999998876554

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-42  Score=305.78  Aligned_cols=239  Identities=20%  Similarity=0.221  Sum_probs=202.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      ++++||++|||||++|||+++|++|+++|++|++++|+..  ++..+.+...  +.++.++.+|++++++++++++++.+
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEAL--GRKFHFITADLIQQKDIDSIVSQAVE   79 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHc--CCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999988642  3333334332  45788999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          105 QGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      .+|++|++|||||+....  .+.+.++|++++++|+.++++++++++|.|.++    +.+|+||++||.++..+.+    
T Consensus        80 ~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~----~~~g~ii~isS~~~~~~~~----  151 (251)
T PRK12481         80 VMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQ----GNGGKIINIASMLSFQGGI----  151 (251)
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHc----CCCCEEEEeCChhhcCCCC----
Confidence            999999999999986542  267889999999999999999999999999873    2258999999999887655    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----hhHhHHHHHHHhhcCC
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----ILRGFCNTVGKLVLKN  258 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~  258 (313)
                                 ....|++||+|+++++++++.|++++|  ||||+|+||+++|++.....    .........+..+..+
T Consensus       152 -----------~~~~Y~asK~a~~~l~~~la~e~~~~g--irvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~  218 (251)
T PRK12481        152 -----------RVPSYTASKSAVMGLTRALATELSQYN--INVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGT  218 (251)
T ss_pred             -----------CCcchHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCCCccCchhhcccChHHHHHHHhcCCCCCCcC
Confidence                       567899999999999999999999999  99999999999999865321    1122333445667789


Q ss_pred             hHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          259 IPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       259 ~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      |+|+|++++||++ +.+.++||+.+..||+.
T Consensus       219 peeva~~~~~L~s-~~~~~~~G~~i~vdgg~  248 (251)
T PRK12481        219 PDDLAGPAIFLSS-SASDYVTGYTLAVDGGW  248 (251)
T ss_pred             HHHHHHHHHHHhC-ccccCcCCceEEECCCE
Confidence            9999999999998 88899999999988764

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.6e-42  Score=307.74  Aligned_cols=241  Identities=17%  Similarity=0.192  Sum_probs=201.0

Q ss_pred             hccCCCCCCCEEEEeCCC--CchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHH
Q 021391           21 VTQGIDGTGLTAIVTGAS--SGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKF   98 (313)
Q Consensus        21 ~~~~~~~~gk~~lItGas--~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~   98 (313)
                      +.+.++++||++|||||+  +|||+++|++|+++|++|++++|+.+.. +..+++.++.  ....++++|++|+++++++
T Consensus         2 ~~~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~-~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~   78 (258)
T PRK07533          2 MQPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKAR-PYVEPLAEEL--DAPIFLPLDVREPGQLEAV   78 (258)
T ss_pred             CCcccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhH-HHHHHHHHhh--ccceEEecCcCCHHHHHHH
Confidence            456778899999999999  5999999999999999999999986432 2334444332  2356889999999999999


Q ss_pred             HHHHhhcCCCeeEEEEcccCCCC-----C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391           99 ASEYNSQGRPLNILINNAGIMAS-----P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus        99 ~~~~~~~~g~id~lv~~ag~~~~-----~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                      ++++.+++|++|++|||||+...     + .+.+.++|++.+++|+.+++++++.++|+|.+       +|+||++||.+
T Consensus        79 ~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~-------~g~Ii~iss~~  151 (258)
T PRK07533         79 FARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN-------GGSLLTMSYYG  151 (258)
T ss_pred             HHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc-------CCEEEEEeccc
Confidence            99999999999999999997642     1 26788999999999999999999999999954       58999999988


Q ss_pred             ccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----hhHhHH
Q 021391          173 HRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----ILRGFC  248 (313)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----~~~~~~  248 (313)
                      +..+.+               .+..|++||+|+++|+++|+.|++++|  ||||+|+||+++|++.....    ..+.+.
T Consensus       152 ~~~~~~---------------~~~~Y~asKaal~~l~~~la~el~~~g--I~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~  214 (258)
T PRK07533        152 AEKVVE---------------NYNLMGPVKAALESSVRYLAAELGPKG--IRVHAISPGPLKTRAASGIDDFDALLEDAA  214 (258)
T ss_pred             cccCCc---------------cchhhHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCCcCChhhhccCCcHHHHHHHH
Confidence            766555               677899999999999999999999999  99999999999999865321    112233


Q ss_pred             HHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          249 NTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       249 ~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      ...+..+..+|+|+|+.++||++ +.+.++||+.+.+||+.
T Consensus       215 ~~~p~~r~~~p~dva~~~~~L~s-~~~~~itG~~i~vdgg~  254 (258)
T PRK07533        215 ERAPLRRLVDIDDVGAVAAFLAS-DAARRLTGNTLYIDGGY  254 (258)
T ss_pred             hcCCcCCCCCHHHHHHHHHHHhC-hhhccccCcEEeeCCcc
Confidence            34455677899999999999998 77889999999988764

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4e-42  Score=304.15  Aligned_cols=244  Identities=25%  Similarity=0.261  Sum_probs=207.7

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .++++||++|||||++|||++++++|+++|++|++++|+.++.++..+++...  +.++.++.+|++++++++++++++.
T Consensus         4 ~~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   81 (253)
T PRK05867          4 LFDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTS--GGKVVPVCCDVSQHQQVTSMLDQVT   81 (253)
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999999998888887777654  4578899999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          104 SQGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      +.++++|+||||+|+.... . +.+.++|++.+++|+.+++.+++++.|.|.+.    +.+++||++||..+......  
T Consensus        82 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~~~g~iv~~sS~~~~~~~~~--  155 (253)
T PRK05867         82 AELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQ----GQGGVIINTASMSGHIINVP--  155 (253)
T ss_pred             HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhc----CCCcEEEEECcHHhcCCCCC--
Confidence            9999999999999986532 2 67889999999999999999999999999873    23579999999887543210  


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc-hhHhHHHHHHHhhcCChH
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG-ILRGFCNTVGKLVLKNIP  260 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~  260 (313)
                                 .....|+++|+|++.++++++.|++++|  |+||+|+||+++|++..... ....+....+..+..+|+
T Consensus       156 -----------~~~~~Y~asKaal~~~~~~la~e~~~~g--I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~r~~~p~  222 (253)
T PRK05867        156 -----------QQVSHYCASKAAVIHLTKAMAVELAPHK--IRVNSVSPGYILTELVEPYTEYQPLWEPKIPLGRLGRPE  222 (253)
T ss_pred             -----------CCccchHHHHHHHHHHHHHHHHHHhHhC--eEEEEeecCCCCCcccccchHHHHHHHhcCCCCCCcCHH
Confidence                       0346899999999999999999999999  99999999999999876432 222333444566788999


Q ss_pred             HHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          261 QGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       261 eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      |+|++++||++ +.+.++||+.+.+||+.
T Consensus       223 ~va~~~~~L~s-~~~~~~tG~~i~vdgG~  250 (253)
T PRK05867        223 ELAGLYLYLAS-EASSYMTGSDIVIDGGY  250 (253)
T ss_pred             HHHHHHHHHcC-cccCCcCCCeEEECCCc
Confidence            99999999998 88899999999988765

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=2.3e-42  Score=306.78  Aligned_cols=240  Identities=17%  Similarity=0.133  Sum_probs=201.2

Q ss_pred             CCCCCCEEEEeCCC--CchHHHHHHHHHHcCCEEEEEecCch--hHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHH
Q 021391           25 IDGTGLTAIVTGAS--SGIGTETARVLALRGVHVIMAVRNMA--AGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFAS  100 (313)
Q Consensus        25 ~~~~gk~~lItGas--~giG~aia~~La~~G~~V~l~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~  100 (313)
                      ++++||++|||||+  +|||+++|++|+++|++|++++|+.+  ..++..+++.+.  ...+.++++|++|+++++++++
T Consensus         2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~   79 (258)
T PRK07370          2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEP--LNPSLFLPCDVQDDAQIEETFE   79 (258)
T ss_pred             cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhc--cCcceEeecCcCCHHHHHHHHH
Confidence            46789999999986  89999999999999999999987643  344555566544  2357789999999999999999


Q ss_pred             HHhhcCCCeeEEEEcccCCCC-----CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccc
Q 021391          101 EYNSQGRPLNILINNAGIMAS-----PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHR  174 (313)
Q Consensus       101 ~~~~~~g~id~lv~~ag~~~~-----~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~  174 (313)
                      ++.+++|++|++|||+|+...     +. +.+.++|++.+++|+.+++++++.++|.|.+       +|+||++||..+.
T Consensus        80 ~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~-------~g~Iv~isS~~~~  152 (258)
T PRK07370         80 TIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE-------GGSIVTLTYLGGV  152 (258)
T ss_pred             HHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh-------CCeEEEEeccccc
Confidence            999999999999999997632     22 6788999999999999999999999999975       5899999999887


Q ss_pred             ccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----chhHhHHHH
Q 021391          175 FAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----GILRGFCNT  250 (313)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----~~~~~~~~~  250 (313)
                      .+.|               .+..|++||+|+++|+++|+.|++++|  |+||+|+||+++|++....    +........
T Consensus       153 ~~~~---------------~~~~Y~asKaal~~l~~~la~el~~~g--I~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~  215 (258)
T PRK07370        153 RAIP---------------NYNVMGVAKAALEASVRYLAAELGPKN--IRVNAISAGPIRTLASSAVGGILDMIHHVEEK  215 (258)
T ss_pred             cCCc---------------ccchhhHHHHHHHHHHHHHHHHhCcCC--eEEEEEecCcccCchhhccccchhhhhhhhhc
Confidence            6665               678899999999999999999999999  9999999999999975422    111122233


Q ss_pred             HHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          251 VGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       251 ~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      .+..+..+|+|++++++||++ +.+.++||+.+.+||+...
T Consensus       216 ~p~~r~~~~~dva~~~~fl~s-~~~~~~tG~~i~vdgg~~~  255 (258)
T PRK07370        216 APLRRTVTQTEVGNTAAFLLS-DLASGITGQTIYVDAGYCI  255 (258)
T ss_pred             CCcCcCCCHHHHHHHHHHHhC-hhhccccCcEEEECCcccc
Confidence            355577899999999999998 8889999999998877543

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-42  Score=304.92  Aligned_cols=243  Identities=23%  Similarity=0.247  Sum_probs=209.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++...+.+.++.++++|++++++++++++++.+.
T Consensus         4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (260)
T PRK07063          4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA   83 (260)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999888888888765434567889999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCC--CCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          106 GRPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      ++++|++|||||....  ..+.+.++|++++++|+.+++.++++++|.|.+     +..++||++||..+..+.+     
T Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~g~iv~isS~~~~~~~~-----  153 (260)
T PRK07063         84 FGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVE-----RGRGSIVNIASTHAFKIIP-----  153 (260)
T ss_pred             hCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh-----hCCeEEEEECChhhccCCC-----
Confidence            9999999999997543  236778899999999999999999999999987     3468999999998877665     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-----c---hhHhHHHHHHHhh
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-----G---ILRGFCNTVGKLV  255 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-----~---~~~~~~~~~~~~~  255 (313)
                                +..+|+++|+|++.++++++.|++++|  ||||+|+||+++|++....     .   .........+..+
T Consensus       154 ----------~~~~Y~~sKaa~~~~~~~la~el~~~g--Irvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r  221 (260)
T PRK07063        154 ----------GCFPYPVAKHGLLGLTRALGIEYAARN--VRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKR  221 (260)
T ss_pred             ----------CchHHHHHHHHHHHHHHHHHHHhCccC--eEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCC
Confidence                      667899999999999999999999999  9999999999999985431     0   1111223345567


Q ss_pred             cCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          256 LKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       256 ~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      ..+|+|+|+.++||++ +.+.++||+.+.+||+...
T Consensus       222 ~~~~~~va~~~~fl~s-~~~~~itG~~i~vdgg~~~  256 (260)
T PRK07063        222 IGRPEEVAMTAVFLAS-DEAPFINATCITIDGGRSV  256 (260)
T ss_pred             CCCHHHHHHHHHHHcC-ccccccCCcEEEECCCeee
Confidence            7899999999999998 7888999999998877543

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.6e-42  Score=306.36  Aligned_cols=241  Identities=17%  Similarity=0.165  Sum_probs=199.2

Q ss_pred             CCCCCCCEEEEeCCC--CchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHH
Q 021391           24 GIDGTGLTAIVTGAS--SGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        24 ~~~~~gk~~lItGas--~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      .++++||++|||||+  +|||+++|++|+++|++|++++|+... ++..+++..+..+.++.++++|++|++++++++++
T Consensus         2 ~~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   80 (257)
T PRK08594          2 MLSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERL-EKEVRELADTLEGQESLLLPCDVTSDEEITACFET   80 (257)
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccc-hHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHH
Confidence            367899999999997  899999999999999999999886422 22233343333245788999999999999999999


Q ss_pred             HhhcCCCeeEEEEcccCCC-----CC-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccc
Q 021391          102 YNSQGRPLNILINNAGIMA-----SP-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRF  175 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~~-----~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~  175 (313)
                      +.+++|++|++|||||+..     .+ .+.+.++|++.+++|+.+++.+++.++|+|.+       +|+||++||.++..
T Consensus        81 ~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------~g~Iv~isS~~~~~  153 (257)
T PRK08594         81 IKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE-------GGSIVTLTYLGGER  153 (257)
T ss_pred             HHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc-------CceEEEEcccCCcc
Confidence            9999999999999999753     12 26788899999999999999999999999965       58999999999877


Q ss_pred             cccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----hhHhHHHHH
Q 021391          176 AYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----ILRGFCNTV  251 (313)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----~~~~~~~~~  251 (313)
                      +.+               .+.+|++||+|+++|+++++.|++++|  ||||+|+||+++|++.....    .........
T Consensus       154 ~~~---------------~~~~Y~asKaal~~l~~~la~el~~~g--Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  216 (257)
T PRK08594        154 VVQ---------------NYNVMGVAKASLEASVKYLANDLGKDG--IRVNAISAGPIRTLSAKGVGGFNSILKEIEERA  216 (257)
T ss_pred             CCC---------------CCchhHHHHHHHHHHHHHHHHHhhhcC--CEEeeeecCcccCHhHhhhccccHHHHHHhhcC
Confidence            655               667899999999999999999999999  99999999999998754221    111122233


Q ss_pred             HHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          252 GKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       252 ~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      +..+..+|+|+|+.++||++ +.+.++||+.+..||+..
T Consensus       217 p~~r~~~p~~va~~~~~l~s-~~~~~~tG~~~~~dgg~~  254 (257)
T PRK08594        217 PLRRTTTQEEVGDTAAFLFS-DLSRGVTGENIHVDSGYH  254 (257)
T ss_pred             CccccCCHHHHHHHHHHHcC-cccccccceEEEECCchh
Confidence            44567899999999999998 888999999998877643

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=7.7e-41  Score=305.39  Aligned_cols=287  Identities=43%  Similarity=0.589  Sum_probs=229.1

Q ss_pred             CCCCCCccchhccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCC
Q 021391           11 GFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS   90 (313)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s   90 (313)
                      +|.+.+....+.+..+++||++|||||++|||+++|++|+++|++|++++|+.++.++..+++.      ++.++.+|++
T Consensus         8 ~~~~~~~~~~~~~~~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~------~v~~~~~Dl~   81 (315)
T PRK06196          8 GFGAASTAEEVLAGHDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID------GVEVVMLDLA   81 (315)
T ss_pred             CCCccccHHHHhcCCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh------hCeEEEccCC
Confidence            4555555555556678899999999999999999999999999999999999887776665542      3778999999


Q ss_pred             CHHHHHHHHHHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECC
Q 021391           91 SLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSS  170 (313)
Q Consensus        91 ~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS  170 (313)
                      |.++++++++++.+.++++|+||||||+...+...+.++++..+++|+.+++++++.++|.|.+     ...++||++||
T Consensus        82 d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~-----~~~~~iV~vSS  156 (315)
T PRK06196         82 DLESVRAFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAA-----GAGARVVALSS  156 (315)
T ss_pred             CHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHh-----cCCCeEEEECC
Confidence            9999999999999999999999999998655556678899999999999999999999999987     33589999999


Q ss_pred             ccccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhH----h
Q 021391          171 EAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILR----G  246 (313)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~----~  246 (313)
                      .++..+   ...+++.+...++.+...|++||++++.+++.++.++.+.|  |+||+|+||++.|++........    .
T Consensus       157 ~~~~~~---~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~  231 (315)
T PRK06196        157 AGHRRS---PIRWDDPHFTRGYDKWLAYGQSKTANALFAVHLDKLGKDQG--VRAFSVHPGGILTPLQRHLPREEQVALG  231 (315)
T ss_pred             HHhccC---CCCccccCccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCC--cEEEEeeCCcccCCccccCChhhhhhhh
Confidence            865432   12233333345566778899999999999999999999989  99999999999999876432111    1


Q ss_pred             HHHH--HHH-hhcCChHHHHHHHHHHHccCCccCCCceeecCCccc----------CCCccCCCHHHHHHHHHHHHhhhC
Q 021391          247 FCNT--VGK-LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY----------KPNSQGQNMELAKKLWDFSMNLVK  313 (313)
Q Consensus       247 ~~~~--~~~-~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~  313 (313)
                      +...  .+. .+..+|+++|..++|+++++......|.++.+.+..          ..++.+.|.+.+++||+.|+++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~lW~~s~~~~~  311 (315)
T PRK06196        232 WVDEHGNPIDPGFKTPAQGAATQVWAATSPQLAGMGGLYCEDCDIAEPTPKDAPWSGVRPHAIDPEAAARLWALSAALTG  311 (315)
T ss_pred             hhhhhhhhhhhhcCCHhHHHHHHHHHhcCCccCCCCCeEeCCCcccccCCcccccCCCCcccCCHHHHHHHHHHHHHHHC
Confidence            1111  111 146789999999999998666666678787654433          235567899999999999999864

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-40  Score=302.09  Aligned_cols=281  Identities=40%  Similarity=0.560  Sum_probs=227.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+.+..++..+++....++.++.++.+|++|.++++++++++.
T Consensus        11 ~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~   90 (306)
T PRK06197         11 IPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALR   90 (306)
T ss_pred             cccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999998888877777765555678899999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          104 SQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      ++++++|+||||||+...+...+.++++..+++|+.+++.+++.++|.|.+     ...++||++||.++....  ..++
T Consensus        91 ~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~-----~~~~~iV~vSS~~~~~~~--~~~~  163 (306)
T PRK06197         91 AAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLP-----VPGSRVVTVSSGGHRIRA--AIHF  163 (306)
T ss_pred             hhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhh-----CCCCEEEEECCHHHhccC--CCCc
Confidence            999999999999998765556778899999999999999999999999987     346899999998765421  1234


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchh-HhHHHHHHHhhcCChHHH
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGIL-RGFCNTVGKLVLKNIPQG  262 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~ev  262 (313)
                      ++++.+..+++...|++||++++.+++.++.++.+.|.+|.+++++||+++|++.+..+.. ..+..........++++.
T Consensus       164 ~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~g  243 (306)
T PRK06197        164 DDLQWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRALRPVATVLAPLLAQSPEMG  243 (306)
T ss_pred             cccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcHHHHHHHHHHHhhhcCCHHHH
Confidence            4555555677788999999999999999999999888555556668999999997754321 122222222335678888


Q ss_pred             HHHHHHHHccCCccCCCceeecCCccc---------CCCccCCCHHHHHHHHHHHHhhhC
Q 021391          263 AATTCYVALHPQVQGVSGEYFSDSNIY---------KPNSQGQNMELAKKLWDFSMNLVK  313 (313)
Q Consensus       263 a~~~~~l~~~~~~~~~tG~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~  313 (313)
                      +..+++++..  ....+|.++.+++..         .+++.+.|++.+++||+.++++++
T Consensus       244 ~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~  301 (306)
T PRK06197        244 ALPTLRAATD--PAVRGGQYYGPDGFGEQRGYPKVVASSAQSHDEDLQRRLWAVSEELTG  301 (306)
T ss_pred             HHHHHHHhcC--CCcCCCeEEccCcccccCCCCccCCCccccCCHHHHHHHHHHHHHHHC
Confidence            8888888763  345689999876533         455667899999999999999864

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-41  Score=302.62  Aligned_cols=244  Identities=23%  Similarity=0.236  Sum_probs=210.6

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      ++++++||++|||||++|||++++++|+++|++|++++|+.+++++..+++...+++.++.++.+|++|+++++++++++
T Consensus         2 ~~~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   81 (265)
T PRK07062          2 MQIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAV   81 (265)
T ss_pred             CccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHH
Confidence            35678999999999999999999999999999999999999888888888877766668899999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCC-CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          103 NSQGRPLNILINNAGIMAS-PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~-~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      .+.++++|+||||||.... +. +.+.++|++.+++|+.+++.+++.++|.|.+     ...|+||++||..+..+.+  
T Consensus        82 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~g~iv~isS~~~~~~~~--  154 (265)
T PRK07062         82 EARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRA-----SAAASIVCVNSLLALQPEP--  154 (265)
T ss_pred             HHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-----cCCcEEEEeccccccCCCC--
Confidence            9999999999999998643 22 6778899999999999999999999999987     4468999999999887665  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-c-------hhHhHH----
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-G-------ILRGFC----  248 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-~-------~~~~~~----  248 (313)
                                   ....|+++|+|+.+++++++.|+.++|  |+||+|+||+++|++.... .       ....+.    
T Consensus       155 -------------~~~~y~asKaal~~~~~~la~e~~~~g--i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  219 (265)
T PRK07062        155 -------------HMVATSAARAGLLNLVKSLATELAPKG--VRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALA  219 (265)
T ss_pred             -------------CchHhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHh
Confidence                         567899999999999999999999999  9999999999999976431 0       011111    


Q ss_pred             --HHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          249 --NTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       249 --~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                        ..++..+..+|+|+|++++||++ +.+.++||+.+..||+.
T Consensus       220 ~~~~~p~~r~~~p~~va~~~~~L~s-~~~~~~tG~~i~vdgg~  261 (265)
T PRK07062        220 RKKGIPLGRLGRPDEAARALFFLAS-PLSSYTTGSHIDVSGGF  261 (265)
T ss_pred             hcCCCCcCCCCCHHHHHHHHHHHhC-chhcccccceEEEcCce
Confidence              12344567899999999999997 78899999999988763

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.1e-41  Score=302.98  Aligned_cols=238  Identities=16%  Similarity=0.138  Sum_probs=199.3

Q ss_pred             CCCCEEEEeCC--CCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           27 GTGLTAIVTGA--SSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        27 ~~gk~~lItGa--s~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      ++||++|||||  ++|||+++|++|+++|++|++++|+. ..++..+++....  .....+++|++|+++++++++++.+
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAEL--DSELVFRCDVASDDEINQVFADLGK   80 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhcc--CCceEEECCCCCHHHHHHHHHHHHH
Confidence            78999999997  67999999999999999999998863 3444555555443  2356789999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCC-----C-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccc
Q 021391          105 QGRPLNILINNAGIMAS-----P-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAY  177 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~-----~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~  177 (313)
                      ++|++|++|||||+...     + . +.+.++|+..+++|+.+++++++++.|.|.+     + +|+||++||.++..+.
T Consensus        81 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~-----~-~g~Iv~iss~~~~~~~  154 (261)
T PRK08690         81 HWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRG-----R-NSAIVALSYLGAVRAI  154 (261)
T ss_pred             HhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhh-----c-CcEEEEEcccccccCC
Confidence            99999999999998643     1 1 4567889999999999999999999999865     2 4799999999887766


Q ss_pred             cCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----hhHhHHHHHHH
Q 021391          178 SEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----ILRGFCNTVGK  253 (313)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----~~~~~~~~~~~  253 (313)
                      |               ++.+|+++|+|+++|+++++.|++++|  ||||+|+||+++|++.....    ....+.+..+.
T Consensus       155 ~---------------~~~~Y~asKaal~~l~~~la~e~~~~g--IrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~  217 (261)
T PRK08690        155 P---------------NYNVMGMAKASLEAGIRFTAACLGKEG--IRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPL  217 (261)
T ss_pred             C---------------CcccchhHHHHHHHHHHHHHHHhhhcC--eEEEEEecCcccchhhhcCCchHHHHHHHhhcCCC
Confidence            6               678999999999999999999999999  99999999999999864321    11222334456


Q ss_pred             hhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          254 LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       254 ~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      .+..+|+|+|+.++||++ +.+.++||+.+.+||+...
T Consensus       218 ~r~~~peevA~~v~~l~s-~~~~~~tG~~i~vdgG~~~  254 (261)
T PRK08690        218 RRNVTIEEVGNTAAFLLS-DLSSGITGEITYVDGGYSI  254 (261)
T ss_pred             CCCCCHHHHHHHHHHHhC-cccCCcceeEEEEcCCccc
Confidence            678899999999999998 7889999999998887654

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.3e-41  Score=302.58  Aligned_cols=236  Identities=14%  Similarity=0.173  Sum_probs=197.2

Q ss_pred             CCCCEEEEeCCCC--chHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           27 GTGLTAIVTGASS--GIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        27 ~~gk~~lItGas~--giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      ++||++|||||++  |||+++|++|+++|++|++++|+ ++.++..+++..+.  ..+.++.+|++|+++++++++++.+
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQL--GSDIVLPCDVAEDASIDAMFAELGK   80 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhcc--CCceEeecCCCCHHHHHHHHHHHHh
Confidence            6899999999986  99999999999999999999987 34555566665543  3467889999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCC-------CCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccc
Q 021391          105 QGRPLNILINNAGIMAS-------PFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAY  177 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~-------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~  177 (313)
                      ++|++|++|||||+...       ..+.+.++|++.+++|+.+++.+++.+.|.+.+       +|+||++||.++..+.
T Consensus        81 ~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------~g~Iv~iss~~~~~~~  153 (262)
T PRK07984         81 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP-------GSALLTLSYLGAERAI  153 (262)
T ss_pred             hcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC-------CcEEEEEecCCCCCCC
Confidence            99999999999997542       114677899999999999999999999986643       5899999998877665


Q ss_pred             cCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----hhHhHHHHHHH
Q 021391          178 SEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----ILRGFCNTVGK  253 (313)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----~~~~~~~~~~~  253 (313)
                      +               .+.+|++||+|+++|+++++.|++++|  ||||+|+||+++|++.....    .........+.
T Consensus       154 ~---------------~~~~Y~asKaal~~l~~~la~el~~~g--IrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~  216 (262)
T PRK07984        154 P---------------NYNVMGLAKASLEANVRYMANAMGPEG--VRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI  216 (262)
T ss_pred             C---------------CcchhHHHHHHHHHHHHHHHHHhcccC--cEEeeeecCcccchHHhcCCchHHHHHHHHHcCCC
Confidence            5               677899999999999999999999999  99999999999998654221    11122233455


Q ss_pred             hhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          254 LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       254 ~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      .+..+|+|+|+.++||++ +.+.++||+++..+++..
T Consensus       217 ~r~~~pedva~~~~~L~s-~~~~~itG~~i~vdgg~~  252 (262)
T PRK07984        217 RRTVTIEDVGNSAAFLCS-DLSAGISGEVVHVDGGFS  252 (262)
T ss_pred             cCCCCHHHHHHHHHHHcC-cccccccCcEEEECCCcc
Confidence            677899999999999998 778999999999887643

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=8.5e-42  Score=308.20  Aligned_cols=251  Identities=15%  Similarity=0.176  Sum_probs=206.0

Q ss_pred             cCCCCCCCEEEEeCC--CCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHh-------CCCC----ceEEEEccC
Q 021391           23 QGIDGTGLTAIVTGA--SSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKE-------IPSA----KVDAMELDV   89 (313)
Q Consensus        23 ~~~~~~gk~~lItGa--s~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~-------~~~~----~~~~~~~D~   89 (313)
                      ..++++||++|||||  ++|||+++|+.|+++|++|++ +|+.++++....++...       .+..    ....+.+|+
T Consensus         3 ~~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   81 (303)
T PLN02730          3 LPIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDA   81 (303)
T ss_pred             CCcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecce
Confidence            456799999999999  899999999999999999999 78888888777666531       0111    146788998


Q ss_pred             --CCH------------------HHHHHHHHHHhhcCCCeeEEEEcccCCC---CCC-ccCccchhhhhhhhhhHHHHHH
Q 021391           90 --SSL------------------ASVRKFASEYNSQGRPLNILINNAGIMA---SPF-MLSKDNIELQFATNHLGHFLLT  145 (313)
Q Consensus        90 --s~~------------------~~v~~~~~~~~~~~g~id~lv~~ag~~~---~~~-~~~~~~~~~~~~~n~~~~~~l~  145 (313)
                        +++                  ++++++++++.+++|++|+||||||...   .+. +.+.++|++++++|+.++++++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~  161 (303)
T PLN02730         82 VFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLL  161 (303)
T ss_pred             ecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence              433                  4899999999999999999999997542   233 7889999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCCCCCCcc-ccchHhHHHHHHHHHHHHHHhcc-CCCcE
Q 021391          146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSF-GAYGQSKLANILHAKELAKHLKE-DGVNI  223 (313)
Q Consensus       146 ~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~asK~a~~~l~~~la~e~~~-~g~~I  223 (313)
                      |.++|.|.+       .|+||++||.++..+.|               .+ ..|++||+|++.|+++|+.|+++ +|  |
T Consensus       162 ~~~~p~m~~-------~G~II~isS~a~~~~~p---------------~~~~~Y~asKaAl~~l~~~la~El~~~~g--I  217 (303)
T PLN02730        162 QHFGPIMNP-------GGASISLTYIASERIIP---------------GYGGGMSSAKAALESDTRVLAFEAGRKYK--I  217 (303)
T ss_pred             HHHHHHHhc-------CCEEEEEechhhcCCCC---------------CCchhhHHHHHHHHHHHHHHHHHhCcCCC--e
Confidence            999999976       48999999998877655               33 47999999999999999999986 78  9


Q ss_pred             EEEEeeCcccccCCccccchhHh----HHHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCCccCCCHH
Q 021391          224 TANSLHPGSIVTNLFRYNGILRG----FCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNME  299 (313)
Q Consensus       224 ~vn~i~PG~v~t~~~~~~~~~~~----~~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~~~~~~~  299 (313)
                      |||+|+||+++|++.........    .....+..+..+|+|+++.++||++ +.+.++||+.+.++++........|.+
T Consensus       218 rVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~peevA~~~~fLaS-~~a~~itG~~l~vdGG~~~~g~~~~~~  296 (303)
T PLN02730        218 RVNTISAGPLGSRAAKAIGFIDDMIEYSYANAPLQKELTADEVGNAAAFLAS-PLASAITGATIYVDNGLNAMGLALDSP  296 (303)
T ss_pred             EEEEEeeCCccCchhhcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-ccccCccCCEEEECCCccccccCCCcc
Confidence            99999999999998754211111    1122344567899999999999998 888999999999998888777766654

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.2e-41  Score=302.73  Aligned_cols=255  Identities=27%  Similarity=0.290  Sum_probs=212.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      ++||++|||||++|||+++|++|+++|++|++++|+ +.+++..+++...  +.++.++.+|++++++++++++++.+++
T Consensus         4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   80 (272)
T PRK08589          4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSN--GGKAKAYHVDISDEQQVKDFASEIKEQF   80 (272)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            689999999999999999999999999999999999 7777777777553  4578999999999999999999999999


Q ss_pred             CCeeEEEEcccCCCC--CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          107 RPLNILINNAGIMAS--PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       107 g~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      |++|+||||||+...  +. +.+.+.|++.+++|+.+++.++++++|+|.+     + +|+||++||..+..+.+     
T Consensus        81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~-~g~iv~isS~~~~~~~~-----  149 (272)
T PRK08589         81 GRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMME-----Q-GGSIINTSSFSGQAADL-----  149 (272)
T ss_pred             CCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-----c-CCEEEEeCchhhcCCCC-----
Confidence            999999999998643  22 6678899999999999999999999999987     2 48999999998877655     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccch--h----HhHH----HHHHH
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI--L----RGFC----NTVGK  253 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~--~----~~~~----~~~~~  253 (313)
                                ...+|++||+|++.|+++++.|+.++|  |+||+|+||+++|++......  .    ..+.    ...+.
T Consensus       150 ----------~~~~Y~asKaal~~l~~~la~e~~~~g--I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (272)
T PRK08589        150 ----------YRSGYNAAKGAVINFTKSIAIEYGRDG--IRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPL  217 (272)
T ss_pred             ----------CCchHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCC
Confidence                      567899999999999999999999999  999999999999998653210  0    0111    11234


Q ss_pred             hhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCCccCCCHHHHHHHHHHHH
Q 021391          254 LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMELAKKLWDFSM  309 (313)
Q Consensus       254 ~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (313)
                      .++.+|+|+|+.++||++ +.+.++||+++..+|+.... .-.++.+++..|..+.
T Consensus       218 ~~~~~~~~va~~~~~l~s-~~~~~~~G~~i~vdgg~~~~-~~~~~~~~~~~~~~~~  271 (272)
T PRK08589        218 GRLGKPEEVAKLVVFLAS-DDSSFITGETIRIDGGVMAY-TWPGEMLSDDSWKRTL  271 (272)
T ss_pred             CCCcCHHHHHHHHHHHcC-chhcCcCCCEEEECCCcccC-CCCCcccccchhhhhc
Confidence            456789999999999998 77889999999987765432 2236666677777653

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=3.8e-41  Score=293.43  Aligned_cols=225  Identities=25%  Similarity=0.325  Sum_probs=201.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      .++++++||||||+|||+++|++||++|++|++++|+.++++++.+++..++ +..+.++.+|+++++++.++.+++.+.
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~-~v~v~vi~~DLs~~~~~~~l~~~l~~~   81 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT-GVEVEVIPADLSDPEALERLEDELKER   81 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhh-CceEEEEECcCCChhHHHHHHHHHHhc
Confidence            4688999999999999999999999999999999999999999999999887 678999999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          106 GRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      .+.||+||||||+....  .+.++++.++++++|+.+...++++++|.|.+     ++.|.||+|+|.++..+.|     
T Consensus        82 ~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~-----~~~G~IiNI~S~ag~~p~p-----  151 (265)
T COG0300          82 GGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVE-----RGAGHIINIGSAAGLIPTP-----  151 (265)
T ss_pred             CCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCceEEEEechhhcCCCc-----
Confidence            88999999999987653  38999999999999999999999999999999     5689999999999999888     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHHH
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGA  263 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~eva  263 (313)
                                ..+.|++||+++.+|+++|..|+.++|  |+|.++|||++.|+++. .... ......+.....+|+++|
T Consensus       152 ----------~~avY~ATKa~v~~fSeaL~~EL~~~g--V~V~~v~PG~~~T~f~~-~~~~-~~~~~~~~~~~~~~~~va  217 (265)
T COG0300         152 ----------YMAVYSATKAFVLSFSEALREELKGTG--VKVTAVCPGPTRTEFFD-AKGS-DVYLLSPGELVLSPEDVA  217 (265)
T ss_pred             ----------chHHHHHHHHHHHHHHHHHHHHhcCCC--eEEEEEecCcccccccc-cccc-ccccccchhhccCHHHHH
Confidence                      788999999999999999999999999  99999999999999986 2111 111222345567999999


Q ss_pred             HHHHHHHccCCc
Q 021391          264 ATTCYVALHPQV  275 (313)
Q Consensus       264 ~~~~~l~~~~~~  275 (313)
                      +..+..+.....
T Consensus       218 ~~~~~~l~~~k~  229 (265)
T COG0300         218 EAALKALEKGKR  229 (265)
T ss_pred             HHHHHHHhcCCc
Confidence            999999974443

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.4e-41  Score=296.49  Aligned_cols=241  Identities=25%  Similarity=0.265  Sum_probs=206.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      |++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...  +.++.++.+|++++++++++++++.+
T Consensus         2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (254)
T PRK07478          2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAE--GGEAVALAGDVRDEAYAKALVALAVE   79 (254)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            5678999999999999999999999999999999999998888887777654  45788999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCC--CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccc-ccccCC
Q 021391          105 QGRPLNILINNAGIMAS--PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHR-FAYSEG  180 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~-~~~~~~  180 (313)
                      +++++|++|||||+...  +. +.+.+++++.+++|+.+++.+++.++|.|.+     ...++||++||..+. .+.+  
T Consensus        80 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~-----~~~~~iv~~sS~~~~~~~~~--  152 (254)
T PRK07478         80 RFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLA-----RGGGSLIFTSTFVGHTAGFP--  152 (254)
T ss_pred             hcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-----cCCceEEEEechHhhccCCC--
Confidence            99999999999997532  32 6788999999999999999999999999987     447899999998875 3444  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhH---hH-HHHHHHhhc
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILR---GF-CNTVGKLVL  256 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~---~~-~~~~~~~~~  256 (313)
                                   .+..|++||+|++.++++++.+++++|  |+||+|+||+++|++.+......   .. ....+..+.
T Consensus       153 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  217 (254)
T PRK07478        153 -------------GMAAYAASKAGLIGLTQVLAAEYGAQG--IRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRM  217 (254)
T ss_pred             -------------CcchhHHHHHHHHHHHHHHHHHHhhcC--EEEEEEeeCcccCcccccccCCHHHHHHHHhcCCCCCC
Confidence                         678999999999999999999999999  99999999999999865432111   11 112234557


Q ss_pred             CChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          257 KNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       257 ~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      .+|+|+|+.++||++ +.+.++||+.+..||+..
T Consensus       218 ~~~~~va~~~~~l~s-~~~~~~~G~~~~~dgg~~  250 (254)
T PRK07478        218 AQPEEIAQAALFLAS-DAASFVTGTALLVDGGVS  250 (254)
T ss_pred             cCHHHHHHHHHHHcC-chhcCCCCCeEEeCCchh
Confidence            799999999999997 778899999999887654

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=3.6e-41  Score=299.19  Aligned_cols=247  Identities=30%  Similarity=0.324  Sum_probs=208.6

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhC-CCCceEEEEccCCCHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEI-PSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      ..+.++||+++||||++|||+++|++|++.|++|++++|+.+.+++..+++.... .+.++..+.||++++++++.+++.
T Consensus         2 ~~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~   81 (270)
T KOG0725|consen    2 SGGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEF   81 (270)
T ss_pred             CCccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHH
Confidence            3567999999999999999999999999999999999999999999888877643 245799999999999999999999


Q ss_pred             Hhhc-CCCeeEEEEcccCCCCC---CccCccchhhhhhhhhhH-HHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccc
Q 021391          102 YNSQ-GRPLNILINNAGIMASP---FMLSKDNIELQFATNHLG-HFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFA  176 (313)
Q Consensus       102 ~~~~-~g~id~lv~~ag~~~~~---~~~~~~~~~~~~~~n~~~-~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~  176 (313)
                      ..++ +|+||++|||||.....   .+.+.+.|++++++|+.| .+.+.+.+.|++.+     ++++.|+++||.++..+
T Consensus        82 ~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~-----~~gg~I~~~ss~~~~~~  156 (270)
T KOG0725|consen   82 AVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKK-----SKGGSIVNISSVAGVGP  156 (270)
T ss_pred             HHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHh-----cCCceEEEEeccccccC
Confidence            9998 79999999999987643   389999999999999995 66666777777766     56899999999988866


Q ss_pred             ccCCCCCCCCCCCCCCCcc-ccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccch----hHhH----
Q 021391          177 YSEGIRFDKINDESAYNSF-GAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI----LRGF----  247 (313)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~-~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~----~~~~----  247 (313)
                      .+               .. .+|+++|+|++.|+|++|.||+++|  ||||+|+||++.|++ .....    ...+    
T Consensus       157 ~~---------------~~~~~Y~~sK~al~~ltr~lA~El~~~g--IRvN~v~PG~i~T~~-~~~~~~~~~~~~~~~~~  218 (270)
T KOG0725|consen  157 GP---------------GSGVAYGVSKAALLQLTRSLAKELAKHG--IRVNSVSPGLVKTSL-RAAGLDDGEMEEFKEAT  218 (270)
T ss_pred             CC---------------CCcccchhHHHHHHHHHHHHHHHHhhcC--cEEEEeecCcEeCCc-cccccccchhhHHhhhh
Confidence            44               33 6899999999999999999999999  999999999999998 22110    1111    


Q ss_pred             --HHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCCc
Q 021391          248 --CNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNS  293 (313)
Q Consensus       248 --~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~  293 (313)
                        ....+.++...|+|+|..++||++++.+ ++||+.+.+||+.....
T Consensus       219 ~~~~~~p~gr~g~~~eva~~~~fla~~~as-yitG~~i~vdgG~~~~~  265 (270)
T KOG0725|consen  219 DSKGAVPLGRVGTPEEVAEAAAFLASDDAS-YITGQTIIVDGGFTVVG  265 (270)
T ss_pred             ccccccccCCccCHHHHHHhHHhhcCcccc-cccCCEEEEeCCEEeec
Confidence              2244677889999999999999994444 99999999888765543

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3e-41  Score=301.93  Aligned_cols=236  Identities=18%  Similarity=0.174  Sum_probs=196.1

Q ss_pred             CCCCEEEEeCCC--CchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           27 GTGLTAIVTGAS--SGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        27 ~~gk~~lItGas--~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      ++||++|||||+  +|||+++|++|+++|++|++++|+. ...+..+++.++..  ....+++|++|+++++++++++.+
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~-~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~   84 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGD-ALKKRVEPLAAELG--AFVAGHCDVTDEASIDAVFETLEK   84 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCch-HHHHHHHHHHHhcC--CceEEecCCCCHHHHHHHHHHHHH
Confidence            578999999997  8999999999999999999998873 23333444544432  356789999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCC-----C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccccc
Q 021391          105 QGRPLNILINNAGIMAS-----P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYS  178 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~-----~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~  178 (313)
                      ++|++|++|||||+...     + .+.+.++|++.+++|+.+++.+++.+.|+|.+       +|+||++||.++..+.|
T Consensus        85 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~-------~g~Iv~iss~~~~~~~p  157 (272)
T PRK08159         85 KWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD-------GGSILTLTYYGAEKVMP  157 (272)
T ss_pred             hcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC-------CceEEEEeccccccCCC
Confidence            99999999999997642     2 26788999999999999999999999999864       58999999988776655


Q ss_pred             CCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchh---HhHH-HHHHHh
Q 021391          179 EGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGIL---RGFC-NTVGKL  254 (313)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~---~~~~-~~~~~~  254 (313)
                                     .+..|++||+|+.+|+++|+.|+.++|  ||||+|+||+++|++.......   .... ...+..
T Consensus       158 ---------------~~~~Y~asKaal~~l~~~la~el~~~g--IrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~  220 (272)
T PRK08159        158 ---------------HYNVMGVAKAALEASVKYLAVDLGPKN--IRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLR  220 (272)
T ss_pred             ---------------cchhhhhHHHHHHHHHHHHHHHhcccC--eEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCccc
Confidence                           678899999999999999999999999  9999999999999875432111   1111 124556


Q ss_pred             hcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          255 VLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       255 ~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      +..+|+|+|+.++||++ +.+.++||+++.++|+..
T Consensus       221 r~~~peevA~~~~~L~s-~~~~~itG~~i~vdgG~~  255 (272)
T PRK08159        221 RTVTIEEVGDSALYLLS-DLSRGVTGEVHHVDSGYH  255 (272)
T ss_pred             ccCCHHHHHHHHHHHhC-ccccCccceEEEECCCce
Confidence            67899999999999998 788999999999887754

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.7e-41  Score=296.15  Aligned_cols=244  Identities=22%  Similarity=0.212  Sum_probs=206.4

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCch-hHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMA-AGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      .++++||++|||||++|||+++|++|+++|++|++++|+.+ ..++..+++...  +.++.++.+|++|++++.++++++
T Consensus         3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~   80 (254)
T PRK06114          3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAA--GRRAIQIAADVTSKADLRAAVART   80 (254)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHH
Confidence            35689999999999999999999999999999999999764 456666666554  457889999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          103 NSQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      .+.++++|++|||+|+....  .+.+.++|++++++|+.++++++++++|.|.+     +..++||++||.++..+.+..
T Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~~iv~isS~~~~~~~~~~  155 (254)
T PRK06114         81 EAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLE-----NGGGSIVNIASMSGIIVNRGL  155 (254)
T ss_pred             HHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHh-----cCCcEEEEECchhhcCCCCCC
Confidence            99999999999999986542  26788999999999999999999999999987     446899999999887654410


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccch---hHhHHHHHHHhhcC
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI---LRGFCNTVGKLVLK  257 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~---~~~~~~~~~~~~~~  257 (313)
                                   ....|+++|+|+++++++++.|+.++|  ||||+|+||+++|++......   ...+....+..+..
T Consensus       156 -------------~~~~Y~~sKaa~~~l~~~la~e~~~~g--i~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p~~r~~  220 (254)
T PRK06114        156 -------------LQAHYNASKAGVIHLSKSLAMEWVGRG--IRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPMQRMA  220 (254)
T ss_pred             -------------CcchHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEeecCccCcccccccchHHHHHHHhcCCCCCCc
Confidence                         257899999999999999999999999  999999999999998653221   12233444566788


Q ss_pred             ChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          258 NIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       258 ~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      +|+|+|+.++||++ +.+.++||+.+..||+..
T Consensus       221 ~~~dva~~~~~l~s-~~~~~~tG~~i~~dgg~~  252 (254)
T PRK06114        221 KVDEMVGPAVFLLS-DAASFCTGVDLLVDGGFV  252 (254)
T ss_pred             CHHHHHHHHHHHcC-ccccCcCCceEEECcCEe
Confidence            99999999999997 788999999999887653

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5e-41  Score=298.56  Aligned_cols=236  Identities=17%  Similarity=0.157  Sum_probs=193.7

Q ss_pred             CCCCEEEEeCC--CCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           27 GTGLTAIVTGA--SSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        27 ~~gk~~lItGa--s~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      ++||++|||||  ++|||+++|++|+++|++|++++|... .++..+++.++.+  ...++++|++|+++++++++++.+
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~   80 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDR-FKDRITEFAAEFG--SDLVFPCDVASDEQIDALFASLGQ   80 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchH-HHHHHHHHHHhcC--CcceeeccCCCHHHHHHHHHHHHH
Confidence            68999999996  689999999999999999999876522 2233334444332  235789999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCC-----C-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccc
Q 021391          105 QGRPLNILINNAGIMAS-----P-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAY  177 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~-----~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~  177 (313)
                      ++|++|++|||||+...     + . +.+.++|++.+++|+.+++.++++++|+|.+       +|+||++||.++..+.
T Consensus        81 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~-------~g~Ii~iss~~~~~~~  153 (260)
T PRK06997         81 HWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD-------DASLLTLSYLGAERVV  153 (260)
T ss_pred             HhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC-------CceEEEEeccccccCC
Confidence            99999999999998643     1 2 4677899999999999999999999999943       5799999999887665


Q ss_pred             cCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----hhHhHHHHHHH
Q 021391          178 SEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----ILRGFCNTVGK  253 (313)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----~~~~~~~~~~~  253 (313)
                      +               .+.+|++||+|+++|+++++.|++++|  ||||+|+||+++|++.....    ..+.+....+.
T Consensus       154 ~---------------~~~~Y~asKaal~~l~~~la~el~~~g--IrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~  216 (260)
T PRK06997        154 P---------------NYNTMGLAKASLEASVRYLAVSLGPKG--IRANGISAGPIKTLAASGIKDFGKILDFVESNAPL  216 (260)
T ss_pred             C---------------CcchHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeCccccchhccccchhhHHHHHHhcCcc
Confidence            5               677899999999999999999999999  99999999999998754321    11122233455


Q ss_pred             hhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          254 LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       254 ~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      .+..+|+|+|+.++||++ +.+.++||+.+..||+..
T Consensus       217 ~r~~~pedva~~~~~l~s-~~~~~itG~~i~vdgg~~  252 (260)
T PRK06997        217 RRNVTIEEVGNVAAFLLS-DLASGVTGEITHVDSGFN  252 (260)
T ss_pred             cccCCHHHHHHHHHHHhC-ccccCcceeEEEEcCChh
Confidence            677899999999999998 778999999999887643

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=9.5e-41  Score=296.63  Aligned_cols=243  Identities=16%  Similarity=0.194  Sum_probs=203.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEec-CchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVR-NMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      ..+++||++|||||++|||+++|++|+++|++|++++| +.+.++...+++.... +.++.++.+|++|+++++++++++
T Consensus         3 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   81 (260)
T PRK08416          3 SNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKY-GIKAKAYPLNILEPETYKELFKKI   81 (260)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHH
Confidence            35689999999999999999999999999999999875 5566666666665432 457899999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCC-------C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccc
Q 021391          103 NSQGRPLNILINNAGIMAS-------P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHR  174 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~-------~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~  174 (313)
                      .++++++|++|||||+...       + .+.+.+++++.+++|+.+++.+++.++|.|.+     ...++||++||..+.
T Consensus        82 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~g~iv~isS~~~~  156 (260)
T PRK08416         82 DEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEK-----VGGGSIISLSSTGNL  156 (260)
T ss_pred             HHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhc-----cCCEEEEEEeccccc
Confidence            9999999999999986421       2 25677899999999999999999999999987     346899999998877


Q ss_pred             ccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----hhHhHHHH
Q 021391          175 FAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----ILRGFCNT  250 (313)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----~~~~~~~~  250 (313)
                      .+.+               .+..|++||+|++.++++++.|+.++|  ||||+|+||+++|++.....    ........
T Consensus       157 ~~~~---------------~~~~Y~asK~a~~~~~~~la~el~~~g--i~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~  219 (260)
T PRK08416        157 VYIE---------------NYAGHGTSKAAVETMVKYAATELGEKN--IRVNAVSGGPIDTDALKAFTNYEEVKAKTEEL  219 (260)
T ss_pred             cCCC---------------CcccchhhHHHHHHHHHHHHHHhhhhC--eEEEEEeeCcccChhhhhccCCHHHHHHHHhc
Confidence            6655               677999999999999999999999999  99999999999999865321    11222233


Q ss_pred             HHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          251 VGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       251 ~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      .+..+..+|+|+|+.++||++ +.+.++||+.+..+++..
T Consensus       220 ~~~~r~~~p~~va~~~~~l~~-~~~~~~~G~~i~vdgg~~  258 (260)
T PRK08416        220 SPLNRMGQPEDLAGACLFLCS-EKASWLTGQTIVVDGGTT  258 (260)
T ss_pred             CCCCCCCCHHHHHHHHHHHcC-hhhhcccCcEEEEcCCee
Confidence            345567899999999999997 778899999999887643

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.4e-40  Score=295.08  Aligned_cols=235  Identities=20%  Similarity=0.200  Sum_probs=192.0

Q ss_pred             CCCCCCEEEEeCC--CCchHHHHHHHHHHcCCEEEEEecCc--hhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHH
Q 021391           25 IDGTGLTAIVTGA--SSGIGTETARVLALRGVHVIMAVRNM--AAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFAS  100 (313)
Q Consensus        25 ~~~~gk~~lItGa--s~giG~aia~~La~~G~~V~l~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~  100 (313)
                      .++++|++|||||  ++|||+++|++|+++|++|++++|+.  +..++.    ..+. +.++.++++|++|+++++++++
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~----~~~~-~~~~~~~~~Dv~~~~~i~~~~~   77 (256)
T PRK07889          3 GLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERI----AKRL-PEPAPVLELDVTNEEHLASLAD   77 (256)
T ss_pred             ccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHH----HHhc-CCCCcEEeCCCCCHHHHHHHHH
Confidence            3478999999999  89999999999999999999999864  223333    3222 2357789999999999999999


Q ss_pred             HHhhcCCCeeEEEEcccCCCC-----CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccc
Q 021391          101 EYNSQGRPLNILINNAGIMAS-----PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHR  174 (313)
Q Consensus       101 ~~~~~~g~id~lv~~ag~~~~-----~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~  174 (313)
                      ++.+++|++|++|||||+...     +. +.+.++|++.+++|+.+++++++.++|+|.+       +|+||++++.. .
T Consensus        78 ~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~-------~g~Iv~is~~~-~  149 (256)
T PRK07889         78 RVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE-------GGSIVGLDFDA-T  149 (256)
T ss_pred             HHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc-------CceEEEEeecc-c
Confidence            999999999999999998642     12 5677899999999999999999999999975       57999998653 3


Q ss_pred             ccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----hhHhHHHH
Q 021391          175 FAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----ILRGFCNT  250 (313)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----~~~~~~~~  250 (313)
                      .+.+               .+..|++||+|+++|+++|+.|++++|  ||||+|+||+++|++.....    ....+.+.
T Consensus       150 ~~~~---------------~~~~Y~asKaal~~l~~~la~el~~~g--Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  212 (256)
T PRK07889        150 VAWP---------------AYDWMGVAKAALESTNRYLARDLGPRG--IRVNLVAAGPIRTLAAKAIPGFELLEEGWDER  212 (256)
T ss_pred             ccCC---------------ccchhHHHHHHHHHHHHHHHHHhhhcC--eEEEeeccCcccChhhhcccCcHHHHHHHHhc
Confidence            3333               567899999999999999999999999  99999999999999865321    11122233


Q ss_pred             HHHh-hcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          251 VGKL-VLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       251 ~~~~-~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      .+.. +..+|+|+|+.++||++ +.+.++||+++.+||...
T Consensus       213 ~p~~~~~~~p~evA~~v~~l~s-~~~~~~tG~~i~vdgg~~  252 (256)
T PRK07889        213 APLGWDVKDPTPVARAVVALLS-DWFPATTGEIVHVDGGAH  252 (256)
T ss_pred             CccccccCCHHHHHHHHHHHhC-cccccccceEEEEcCcee
Confidence            3444 46899999999999998 778899999999887654

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.2e-40  Score=292.47  Aligned_cols=198  Identities=31%  Similarity=0.323  Sum_probs=181.2

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      ..+..++||+|+|||||+|||+++|.+|+++|++++++.|..+.++...+++.+..+..+++.+++|++|.+++.+++++
T Consensus         5 ~~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~   84 (282)
T KOG1205|consen    5 LFMERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEW   84 (282)
T ss_pred             ccHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHH
Confidence            34566899999999999999999999999999999999999999999989998887655799999999999999999999


Q ss_pred             HhhcCCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccC
Q 021391          102 YNSQGRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSE  179 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~  179 (313)
                      +.+.+|++|+||||||+.....  +.+.+++...|++|++|+..++|+++|+|++     ++.|+||+++|++|..+.| 
T Consensus        85 ~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~-----r~~GhIVvisSiaG~~~~P-  158 (282)
T KOG1205|consen   85 AIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKK-----RNDGHIVVISSIAGKMPLP-  158 (282)
T ss_pred             HHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhh-----cCCCeEEEEeccccccCCC-
Confidence            9999999999999999987433  6677888899999999999999999999998     4469999999999999888 


Q ss_pred             CCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccc
Q 021391          180 GIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY  240 (313)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~  240 (313)
                                    ....|++||+|+.+|+++|..|+.+.+..|++ +|+||+|+|++...
T Consensus       159 --------------~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~  204 (282)
T KOG1205|consen  159 --------------FRSIYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGK  204 (282)
T ss_pred             --------------cccccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccch
Confidence                          56699999999999999999999999877888 99999999997654

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-40  Score=290.85  Aligned_cols=242  Identities=20%  Similarity=0.257  Sum_probs=208.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      -+++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++...  +.++..+.+|++|+++++++++++.
T Consensus         4 ~~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~   81 (254)
T PRK08085          4 LFSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE--GIKAHAAPFNVTHKQEVEAAIEHIE   81 (254)
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEecCCCCHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999999988888887777654  4568889999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCC-C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          104 SQGRPLNILINNAGIMAS-P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~-~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      ++++++|++|||+|.... + .+.+.++|++++++|+.+++.+++++.+.+.+     ++.++||++||..+..+.+   
T Consensus        82 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~~iv~isS~~~~~~~~---  153 (254)
T PRK08085         82 KDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVK-----RQAGKIINICSMQSELGRD---  153 (254)
T ss_pred             HhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-----cCCcEEEEEccchhccCCC---
Confidence            999999999999997643 2 26788999999999999999999999999977     3468999999998776655   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----chhHhHHHHHHHhhcC
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----GILRGFCNTVGKLVLK  257 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~  257 (313)
                                  ....|+++|++++.++++++.++.++|  |+||+|+||+++|++....    .+........+..+..
T Consensus       154 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~  219 (254)
T PRK08085        154 ------------TITPYAASKGAVKMLTRGMCVELARHN--IQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWG  219 (254)
T ss_pred             ------------CCcchHHHHHHHHHHHHHHHHHHHhhC--eEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCCCCCc
Confidence                        677899999999999999999999999  9999999999999986542    1112223344556678


Q ss_pred             ChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          258 NIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       258 ~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      +|+|+|++++||++ +.+.++||+.+..||+..
T Consensus       220 ~~~~va~~~~~l~~-~~~~~i~G~~i~~dgg~~  251 (254)
T PRK08085        220 DPQELIGAAVFLSS-KASDFVNGHLLFVDGGML  251 (254)
T ss_pred             CHHHHHHHHHHHhC-ccccCCcCCEEEECCCee
Confidence            99999999999998 889999999999887653

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-40  Score=296.24  Aligned_cols=242  Identities=21%  Similarity=0.223  Sum_probs=201.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc---------hhHHHHHHHHHHhCCCCceEEEEccCCCHHHHH
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM---------AAGKDVREAIVKEIPSAKVDAMELDVSSLASVR   96 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~---------~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~   96 (313)
                      .++||++|||||++|||+++|++|+++|++|++++|+.         +.+++..+++...  +.++.++.+|++|++++.
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~   80 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA--GGEAVANGDDIADWDGAA   80 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc--CCceEEEeCCCCCHHHHH
Confidence            37899999999999999999999999999999999876         6667777777654  457889999999999999


Q ss_pred             HHHHHHhhcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhcc-CCCCCeEEEECCccc
Q 021391           97 KFASEYNSQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQK-SSREGRIVNVSSEAH  173 (313)
Q Consensus        97 ~~~~~~~~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-~~~~g~iv~isS~~~  173 (313)
                      ++++++.+++|++|++|||||+....  .+.+.++|++.+++|+.++++++++++|+|.+.... ....|+||++||.++
T Consensus        81 ~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~  160 (286)
T PRK07791         81 NLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAG  160 (286)
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhh
Confidence            99999999999999999999986542  277889999999999999999999999999863210 012479999999998


Q ss_pred             cccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHH
Q 021391          174 RFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGK  253 (313)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~  253 (313)
                      ..+.+               ++..|++||+|+++|+++++.|++++|  ||||+|+|| ++|++....  ........+.
T Consensus       161 ~~~~~---------------~~~~Y~asKaal~~l~~~la~el~~~g--IrVn~v~Pg-~~T~~~~~~--~~~~~~~~~~  220 (286)
T PRK07791        161 LQGSV---------------GQGNYSAAKAGIAALTLVAAAELGRYG--VTVNAIAPA-ARTRMTETV--FAEMMAKPEE  220 (286)
T ss_pred             CcCCC---------------CchhhHHHHHHHHHHHHHHHHHHHHhC--eEEEEECCC-CCCCcchhh--HHHHHhcCcc
Confidence            87766               678999999999999999999999999  999999999 788875422  1111111122


Q ss_pred             h--hcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          254 L--VLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       254 ~--~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      .  ...+|+|+|+.++||++ +.+.++||+++..||+..
T Consensus       221 ~~~~~~~pedva~~~~~L~s-~~~~~itG~~i~vdgG~~  258 (286)
T PRK07791        221 GEFDAMAPENVSPLVVWLGS-AESRDVTGKVFEVEGGKI  258 (286)
T ss_pred             cccCCCCHHHHHHHHHHHhC-chhcCCCCcEEEEcCCce
Confidence            1  34689999999999998 778999999999877654

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=7.6e-40  Score=289.69  Aligned_cols=242  Identities=16%  Similarity=0.179  Sum_probs=203.2

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      ++.++++||++|||||++|||++++++|+++|++|++++++..  ++..+.+...  +.++.++++|++|.+++++++++
T Consensus         3 ~~~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~   78 (253)
T PRK08993          3 LDAFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTAL--GRRFLSLTADLRKIDGIPALLER   78 (253)
T ss_pred             ccccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHH
Confidence            3456789999999999999999999999999999999887542  3444445433  45688999999999999999999


Q ss_pred             HhhcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccC
Q 021391          102 YNSQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSE  179 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~  179 (313)
                      +.++++++|++|||||+....  .+.+.++|++++++|+.+++.+++++.|.|.+.    +.+|+||++||..+..+.+ 
T Consensus        79 ~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~----~~~g~iv~isS~~~~~~~~-  153 (253)
T PRK08993         79 AVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQ----GNGGKIINIASMLSFQGGI-  153 (253)
T ss_pred             HHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhC----CCCeEEEEECchhhccCCC-
Confidence            999999999999999986432  267889999999999999999999999999873    2358999999998877655 


Q ss_pred             CCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----hhHhHHHHHHHhh
Q 021391          180 GIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----ILRGFCNTVGKLV  255 (313)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----~~~~~~~~~~~~~  255 (313)
                                    ....|+++|+|++.++++++.++.++|  |+||+|+||+++|++.....    ......+.++..+
T Consensus       154 --------------~~~~Y~~sKaa~~~~~~~la~e~~~~g--i~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~~r  217 (253)
T PRK08993        154 --------------RVPSYTASKSGVMGVTRLMANEWAKHN--INVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGR  217 (253)
T ss_pred             --------------CCcchHHHHHHHHHHHHHHHHHhhhhC--eEEEEEeeCcccCcchhhhccchHHHHHHHhcCCCCC
Confidence                          567899999999999999999999999  99999999999999865321    1122333445567


Q ss_pred             cCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          256 LKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       256 ~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      ..+|+|+|+.++||++ +.+.++||+++..||+.
T Consensus       218 ~~~p~eva~~~~~l~s-~~~~~~~G~~~~~dgg~  250 (253)
T PRK08993        218 WGLPSDLMGPVVFLAS-SASDYINGYTIAVDGGW  250 (253)
T ss_pred             CcCHHHHHHHHHHHhC-ccccCccCcEEEECCCE
Confidence            7899999999999998 78899999999888764

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=1.3e-39  Score=296.43  Aligned_cols=273  Identities=33%  Similarity=0.467  Sum_probs=215.5

Q ss_pred             EEeCCCCchHHHHHHHHHHcC-CEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCeeE
Q 021391           33 IVTGASSGIGTETARVLALRG-VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNI  111 (313)
Q Consensus        33 lItGas~giG~aia~~La~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~id~  111 (313)
                      |||||++|||+++|++|+++| ++|++++|+.++.++..+++...  +.++.++.+|++|.++++++++++.+.++++|+
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~   78 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMP--KDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDV   78 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCE
Confidence            699999999999999999999 99999999988877776666422  446888999999999999999999988899999


Q ss_pred             EEEcccCCCC--C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccc-----cCCCCC
Q 021391          112 LINNAGIMAS--P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAY-----SEGIRF  183 (313)
Q Consensus       112 lv~~ag~~~~--~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~~  183 (313)
                      ||||||+...  + .+.+.++|++++++|+.+++.+++.++|.|.+..   ..+|+||++||..+..+.     +....+
T Consensus        79 lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~---~~~g~IV~vsS~~~~~~~~~~~~~~~~~~  155 (308)
T PLN00015         79 LVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSD---YPSKRLIIVGSITGNTNTLAGNVPPKANL  155 (308)
T ss_pred             EEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC---CCCCEEEEEeccccccccccccCCCccch
Confidence            9999998543  2 2668899999999999999999999999998721   015899999998775321     110111


Q ss_pred             CCCC---------------CCCCCCccccchHhHHHHHHHHHHHHHHhcc-CCCcEEEEEeeCccc-ccCCccccchh-H
Q 021391          184 DKIN---------------DESAYNSFGAYGQSKLANILHAKELAKHLKE-DGVNITANSLHPGSI-VTNLFRYNGIL-R  245 (313)
Q Consensus       184 ~~~~---------------~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~-~g~~I~vn~i~PG~v-~t~~~~~~~~~-~  245 (313)
                      .+++               ....+++..+|++||+|+..+++.+++++.+ .|  |+||+|+||+| +|++.+..... .
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~g--i~v~~v~PG~v~~t~~~~~~~~~~~  233 (308)
T PLN00015        156 GDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETG--ITFASLYPGCIATTGLFREHIPLFR  233 (308)
T ss_pred             hhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCC--eEEEEecCCcccCccccccccHHHH
Confidence            1111               1234567789999999999999999999975 58  99999999999 78887643111 1


Q ss_pred             h---HHHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcc-----cCCCccCCCHHHHHHHHHHHHhhhC
Q 021391          246 G---FCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNI-----YKPNSQGQNMELAKKLWDFSMNLVK  313 (313)
Q Consensus       246 ~---~~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~  313 (313)
                      .   .....+..+..+|+++|+.++++++ +.....+|.|+..++.     ..+++.+.|++.+++||++++++++
T Consensus       234 ~~~~~~~~~~~~~~~~pe~~a~~~~~l~~-~~~~~~~G~~~~~~g~~~~~~~~~~~~a~d~~~~~~lw~~~~~~~~  308 (308)
T PLN00015        234 LLFPPFQKYITKGYVSEEEAGKRLAQVVS-DPSLTKSGVYWSWNGGSASFENQLSQEASDAEKAKKVWEISEKLVG  308 (308)
T ss_pred             HHHHHHHHHHhcccccHHHhhhhhhhhcc-ccccCCCccccccCCcccccccCcChhhcCHHHHHHHHHHHHHhcC
Confidence            1   1122233456899999999999998 5566799999986543     4678888999999999999999875

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-40  Score=293.62  Aligned_cols=249  Identities=20%  Similarity=0.207  Sum_probs=208.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++++|++++++++++++++.+.
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~~   77 (261)
T PRK08265          3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL-----GERARFIATDITDDAAIERAVATVVAR   77 (261)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCeeEEEEecCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999987777665554     446889999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCC-CCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCC
Q 021391          106 GRPLNILINNAGIMAS-PFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFD  184 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  184 (313)
                      ++++|++|||+|.... ..+.+.++|++.+++|+.+++++++++.|.|.+      ++++||++||.++..+.+      
T Consensus        78 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~------~~g~ii~isS~~~~~~~~------  145 (261)
T PRK08265         78 FGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLAR------GGGAIVNFTSISAKFAQT------  145 (261)
T ss_pred             hCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhc------CCcEEEEECchhhccCCC------
Confidence            9999999999997643 236678899999999999999999999999963      268999999999887766      


Q ss_pred             CCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc---h--hHhHH-HHHHHhhcCC
Q 021391          185 KINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG---I--LRGFC-NTVGKLVLKN  258 (313)
Q Consensus       185 ~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~---~--~~~~~-~~~~~~~~~~  258 (313)
                               ....|+++|++++.++++++.|+.++|  |+||+|+||+++|++.....   .  ..... ...+..+..+
T Consensus       146 ---------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~  214 (261)
T PRK08265        146 ---------GRWLYPASKAAIRQLTRSMAMDLAPDG--IRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGD  214 (261)
T ss_pred             ---------CCchhHHHHHHHHHHHHHHHHHhcccC--EEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCCCccC
Confidence                     577899999999999999999999999  99999999999999865321   0  01111 1124456778


Q ss_pred             hHHHHHHHHHHHccCCccCCCceeecCCcccCCCccCCCHHHHHH
Q 021391          259 IPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMELAKK  303 (313)
Q Consensus       259 ~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~~~~~~~~~~~  303 (313)
                      |+|+|+.++||++ +.+.++||+.+.+||+........+.+...+
T Consensus       215 p~dva~~~~~l~s-~~~~~~tG~~i~vdgg~~~~~~~~~~~~~~~  258 (261)
T PRK08265        215 PEEVAQVVAFLCS-DAASFVTGADYAVDGGYSALGPEQGVPAIPR  258 (261)
T ss_pred             HHHHHHHHHHHcC-ccccCccCcEEEECCCeeccCCCCCCCcccc
Confidence            9999999999997 7789999999998888766655555544433

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=7.5e-41  Score=294.03  Aligned_cols=226  Identities=31%  Similarity=0.391  Sum_probs=201.0

Q ss_pred             CCC--CchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC-CCeeEE
Q 021391           36 GAS--SGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG-RPLNIL  112 (313)
Q Consensus        36 Gas--~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~-g~id~l  112 (313)
                      |++  +|||+++|++|+++|++|++++|+.+++++..+++.++.+ ..  ++.+|++++++++++++++.+.+ |+||+|
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~-~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~l   77 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG-AE--VIQCDLSDEESVEALFDEAVERFGGRIDIL   77 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT-SE--EEESCTTSHHHHHHHHHHHHHHHCSSESEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC-Cc--eEeecCcchHHHHHHHHHHHhhcCCCeEEE
Confidence            667  9999999999999999999999999998888888887764 23  59999999999999999999999 999999


Q ss_pred             EEcccCCCC-----CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          113 INNAGIMAS-----PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       113 v~~ag~~~~-----~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                      |||+|....     +. +.+.++|++.+++|+.+++.++|++.|+|.+       +|+||++||..+..+.+        
T Consensus        78 V~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~gsii~iss~~~~~~~~--------  142 (241)
T PF13561_consen   78 VNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKK-------GGSIINISSIAAQRPMP--------  142 (241)
T ss_dssp             EEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHH-------EEEEEEEEEGGGTSBST--------
T ss_pred             EecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------CCCcccccchhhcccCc--------
Confidence            999998754     22 6778999999999999999999999998888       68999999998887766        


Q ss_pred             CCCCCCCccccchHhHHHHHHHHHHHHHHhcc-CCCcEEEEEeeCcccccCCcccc----chhHhHHHHHHHhhcCChHH
Q 021391          187 NDESAYNSFGAYGQSKLANILHAKELAKHLKE-DGVNITANSLHPGSIVTNLFRYN----GILRGFCNTVGKLVLKNIPQ  261 (313)
Q Consensus       187 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~-~g~~I~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~e  261 (313)
                             .+..|+++|+|+++++|++|.||++ +|  ||||+|+||+++|++....    ++.+...+..|.++..+|+|
T Consensus       143 -------~~~~y~~sKaal~~l~r~lA~el~~~~g--IrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~e  213 (241)
T PF13561_consen  143 -------GYSAYSASKAALEGLTRSLAKELAPKKG--IRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPEE  213 (241)
T ss_dssp             -------TTHHHHHHHHHHHHHHHHHHHHHGGHGT--EEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHH
T ss_pred             -------cchhhHHHHHHHHHHHHHHHHHhccccC--eeeeeecccceeccchhccccccchhhhhhhhhccCCCcCHHH
Confidence                   6779999999999999999999999 99  9999999999999985543    23344556677778789999


Q ss_pred             HHHHHHHHHccCCccCCCceeecCCccc
Q 021391          262 GAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       262 va~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      +|++++||++ |.+.++||+.|.+||+.
T Consensus       214 vA~~v~fL~s-~~a~~itG~~i~vDGG~  240 (241)
T PF13561_consen  214 VANAVLFLAS-DAASYITGQVIPVDGGF  240 (241)
T ss_dssp             HHHHHHHHHS-GGGTTGTSEEEEESTTG
T ss_pred             HHHHHHHHhC-ccccCccCCeEEECCCc
Confidence            9999999998 89999999999998875

...

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-39  Score=289.19  Aligned_cols=245  Identities=22%  Similarity=0.227  Sum_probs=207.1

Q ss_pred             hhccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHH
Q 021391           20 EVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFA   99 (313)
Q Consensus        20 ~~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~   99 (313)
                      +.+..++++||++|||||++|||++++++|+++|++|++++|+ +..++..+.+...  +.++.++.+|+++.+++++++
T Consensus         6 ~~~~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~   82 (258)
T PRK06935          6 FSMDFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE--GRKVTFVQVDLTKPESAEKVV   82 (258)
T ss_pred             hccccccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHH
Confidence            3445567899999999999999999999999999999999998 5555555555433  457889999999999999999


Q ss_pred             HHHhhcCCCeeEEEEcccCCCC-C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccc
Q 021391          100 SEYNSQGRPLNILINNAGIMAS-P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAY  177 (313)
Q Consensus       100 ~~~~~~~g~id~lv~~ag~~~~-~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~  177 (313)
                      +++.+.++++|++|||+|.... + .+.+.++|++.+++|+.+++.+++++.|+|.+     ++.++||++||..+..+.
T Consensus        83 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~g~iv~isS~~~~~~~  157 (258)
T PRK06935         83 KEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAK-----QGSGKIINIASMLSFQGG  157 (258)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHh-----cCCeEEEEECCHHhccCC
Confidence            9999999999999999997643 2 26678899999999999999999999999987     446899999999887765


Q ss_pred             cCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----hhHhHHHHHHH
Q 021391          178 SEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----ILRGFCNTVGK  253 (313)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----~~~~~~~~~~~  253 (313)
                      +               ....|+++|++++.++++++.|++++|  |+||+|+||+++|++.....    .........+.
T Consensus       158 ~---------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  220 (258)
T PRK06935        158 K---------------FVPAYTASKHGVAGLTKAFANELAAYN--IQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPA  220 (258)
T ss_pred             C---------------CchhhHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEeccccccchhhcccChHHHHHHHhcCCC
Confidence            5               667999999999999999999999999  99999999999999754321    11122233455


Q ss_pred             hhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          254 LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       254 ~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      .+..+|+|+|+.++||++ +.+.++||+.+..+|+..
T Consensus       221 ~~~~~~~dva~~~~~l~s-~~~~~~~G~~i~~dgg~~  256 (258)
T PRK06935        221 GRWGEPDDLMGAAVFLAS-RASDYVNGHILAVDGGWL  256 (258)
T ss_pred             CCCCCHHHHHHHHHHHcC-hhhcCCCCCEEEECCCee
Confidence            678899999999999998 788999999999887643

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=1.5e-39  Score=291.61  Aligned_cols=243  Identities=24%  Similarity=0.238  Sum_probs=207.8

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      +.+++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++...  +.++.++++|+++++++..+++++
T Consensus         4 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~   81 (278)
T PRK08277          4 NLFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA--GGEALAVKADVLDKESLEQARQQI   81 (278)
T ss_pred             ceeccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHH
Confidence            455789999999999999999999999999999999999988887777777553  457889999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCCC-----------------CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeE
Q 021391          103 NSQGRPLNILINNAGIMASP-----------------FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRI  165 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~-----------------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~i  165 (313)
                      .++++++|++|||+|.....                 .+.+.++|++.+++|+.+++.+++.++|.|.+     .+.++|
T Consensus        82 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~g~i  156 (278)
T PRK08277         82 LEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVG-----RKGGNI  156 (278)
T ss_pred             HHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh-----cCCcEE
Confidence            99999999999999964321                 15667889999999999999999999999987     446899


Q ss_pred             EEECCccccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc---
Q 021391          166 VNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG---  242 (313)
Q Consensus       166 v~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~---  242 (313)
                      |++||..+..+.+               ....|++||+|++.++++++.++++.|  ||||+|+||+++|++.+...   
T Consensus       157 i~isS~~~~~~~~---------------~~~~Y~~sK~a~~~l~~~la~e~~~~g--irvn~v~Pg~v~t~~~~~~~~~~  219 (278)
T PRK08277        157 INISSMNAFTPLT---------------KVPAYSAAKAAISNFTQWLAVHFAKVG--IRVNAIAPGFFLTEQNRALLFNE  219 (278)
T ss_pred             EEEccchhcCCCC---------------CCchhHHHHHHHHHHHHHHHHHhCccC--eEEEEEEeccCcCcchhhhhccc
Confidence            9999999887766               677899999999999999999999999  99999999999999754310   


Q ss_pred             ------hhHhHHHHHHHhhcCChHHHHHHHHHHHccC-CccCCCceeecCCcccC
Q 021391          243 ------ILRGFCNTVGKLVLKNIPQGAATTCYVALHP-QVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       243 ------~~~~~~~~~~~~~~~~~~eva~~~~~l~~~~-~~~~~tG~~~~~~~~~~  290 (313)
                            .........+..++.+|+|+|++++||++ + .+.++||+.+..||+..
T Consensus       220 ~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s-~~~~~~~tG~~i~vdgG~~  273 (278)
T PRK08277        220 DGSLTERANKILAHTPMGRFGKPEELLGTLLWLAD-EKASSFVTGVVLPVDGGFS  273 (278)
T ss_pred             cccchhHHHHHhccCCccCCCCHHHHHHHHHHHcC-ccccCCcCCCEEEECCCee
Confidence                  11122233455677899999999999998 6 78999999999887654

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-39  Score=289.56  Aligned_cols=235  Identities=18%  Similarity=0.150  Sum_probs=200.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      +++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...   .++.++++|++|+++++++++++.++++++
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~i   77 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY---GEVYAVKADLSDKDDLKNLVKEAWELLGGI   77 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            47999999999999999999999999999999998888887777542   368899999999999999999999999999


Q ss_pred             eEEEEcccCCCC----CCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCC
Q 021391          110 NILINNAGIMAS----PFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDK  185 (313)
Q Consensus       110 d~lv~~ag~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  185 (313)
                      |+||||+|....    ..+.+.++|.+.+++|+.+++.+++.++|.|.+.    +.+|+||++||.++..+.+       
T Consensus        78 d~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~----~~~g~iv~isS~~~~~~~~-------  146 (259)
T PRK08340         78 DALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEK----KMKGVLVYLSSVSVKEPMP-------  146 (259)
T ss_pred             CEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhc----CCCCEEEEEeCcccCCCCC-------
Confidence            999999997532    2266778899999999999999999999998742    3468999999998876655       


Q ss_pred             CCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----------ch----hHhHHHHH
Q 021391          186 INDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----------GI----LRGFCNTV  251 (313)
Q Consensus       186 ~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----------~~----~~~~~~~~  251 (313)
                              ....|+++|+++++++++++.+++++|  |+||+|+||+++|++.+..          ..    ........
T Consensus       147 --------~~~~y~~sKaa~~~~~~~la~e~~~~g--I~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (259)
T PRK08340        147 --------PLVLADVTRAGLVQLAKGVSRTYGGKG--IRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERT  216 (259)
T ss_pred             --------CchHHHHHHHHHHHHHHHHHHHhCCCC--EEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccC
Confidence                    667899999999999999999999999  9999999999999986421          00    11222334


Q ss_pred             HHhhcCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          252 GKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       252 ~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      +..+..+|+|+|++++||++ +.++++||+.+..||+.
T Consensus       217 p~~r~~~p~dva~~~~fL~s-~~~~~itG~~i~vdgg~  253 (259)
T PRK08340        217 PLKRTGRWEELGSLIAFLLS-ENAEYMLGSTIVFDGAM  253 (259)
T ss_pred             CccCCCCHHHHHHHHHHHcC-cccccccCceEeecCCc
Confidence            55678899999999999998 88999999999988764

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=1.4e-39  Score=294.23  Aligned_cols=239  Identities=23%  Similarity=0.221  Sum_probs=200.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc--hhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM--AAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      -+++||++|||||++|||+++|++|+++|++|++++|+.  +..+++.+.+...  +.++.++.+|+++.+++.++++++
T Consensus        45 ~~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~  122 (294)
T PRK07985         45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEEC--GRKAVLLPGDLSDEKFARSLVHEA  122 (294)
T ss_pred             CccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHc--CCeEEEEEccCCCHHHHHHHHHHH
Confidence            358999999999999999999999999999999988753  3344444433332  456888999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCC--CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccC
Q 021391          103 NSQGRPLNILINNAGIMAS--PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSE  179 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~  179 (313)
                      .+.+|++|++|||||....  +. +.+.++|++++++|+.+++.+++++.|+|.+       +++||++||..+..+.+ 
T Consensus       123 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-------~g~iv~iSS~~~~~~~~-  194 (294)
T PRK07985        123 HKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK-------GASIITTSSIQAYQPSP-  194 (294)
T ss_pred             HHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc-------CCEEEEECCchhccCCC-
Confidence            9999999999999997532  22 7788999999999999999999999999965       57999999998877665 


Q ss_pred             CCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----chhHhHHHHHHHhh
Q 021391          180 GIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----GILRGFCNTVGKLV  255 (313)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~~~~  255 (313)
                                    ...+|+++|+|++.++++++.|++++|  ||||+|+||+++|++....    +....+....+..+
T Consensus       195 --------------~~~~Y~asKaal~~l~~~la~el~~~g--Irvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r  258 (294)
T PRK07985        195 --------------HLLDYAATKAAILNYSRGLAKQVAEKG--IRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKR  258 (294)
T ss_pred             --------------CcchhHHHHHHHHHHHHHHHHHHhHhC--cEEEEEECCcCccccccccCCCHHHHHHHhccCCCCC
Confidence                          567899999999999999999999999  9999999999999985321    11122333345556


Q ss_pred             cCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          256 LKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       256 ~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      ..+|+|+|++++||++ +.+.++||+.+..||+..
T Consensus       259 ~~~pedva~~~~fL~s-~~~~~itG~~i~vdgG~~  292 (294)
T PRK07985        259 AGQPAELAPVYVYLAS-QESSYVTAEVHGVCGGEH  292 (294)
T ss_pred             CCCHHHHHHHHHhhhC-hhcCCccccEEeeCCCee
Confidence            7899999999999998 788999999999887654

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-39  Score=285.32  Aligned_cols=236  Identities=27%  Similarity=0.345  Sum_probs=196.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEe-cCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAV-RNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      ++||++|||||++|||++++++|+++|++|++++ |+.+..++...++...  +.++..+.+|+++.++++.+++++.+.
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN--GGSAFSIGANLESLHGVEALYSSLDNE   79 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhc--CCceEEEecccCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999875 5666677666666544  446788999999999999999987653


Q ss_pred             ----CC--CeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccc
Q 021391          106 ----GR--PLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAY  177 (313)
Q Consensus       106 ----~g--~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~  177 (313)
                          ++  ++|+||||||+.... . +.+.+.|++++++|+.+++.++++++|.|.+       .|+||++||.++..+.
T Consensus        80 ~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~~  152 (252)
T PRK12747         80 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD-------NSRIINISSAATRISL  152 (252)
T ss_pred             hhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc-------CCeEEEECCcccccCC
Confidence                34  899999999975432 2 6778889999999999999999999999976       5899999999988766


Q ss_pred             cCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc---hhHhHHHHH-HH
Q 021391          178 SEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG---ILRGFCNTV-GK  253 (313)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~---~~~~~~~~~-~~  253 (313)
                      +               ...+|++||+++++++++++.|++++|  ||||+|+||+++|++.....   ......... +.
T Consensus       153 ~---------------~~~~Y~~sKaa~~~~~~~la~e~~~~g--irvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  215 (252)
T PRK12747        153 P---------------DFIAYSMTKGAINTMTFTLAKQLGARG--ITVNAILPGFIKTDMNAELLSDPMMKQYATTISAF  215 (252)
T ss_pred             C---------------CchhHHHHHHHHHHHHHHHHHHHhHcC--CEEEEEecCCccCchhhhcccCHHHHHHHHhcCcc
Confidence            6               667899999999999999999999999  99999999999999865321   111111111 34


Q ss_pred             hhcCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          254 LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       254 ~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      .+..+|+|+|+.++||++ +.+.++||+.+..+|+.
T Consensus       216 ~~~~~~~dva~~~~~l~s-~~~~~~~G~~i~vdgg~  250 (252)
T PRK12747        216 NRLGEVEDIADTAAFLAS-PDSRWVTGQLIDVSGGS  250 (252)
T ss_pred             cCCCCHHHHHHHHHHHcC-ccccCcCCcEEEecCCc
Confidence            567899999999999997 77889999999988754

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-39  Score=284.00  Aligned_cols=241  Identities=27%  Similarity=0.305  Sum_probs=207.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+..+...+++...  +.++.++.+|+++.++++.+++++.
T Consensus         3 ~~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   80 (252)
T PRK07035          3 LFDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAA--GGKAEALACHIGEMEQIDALFAHIR   80 (252)
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999988888877777654  4467889999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCC--C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          104 SQGRPLNILINNAGIMAS--P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~--~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      +.++++|++|||+|....  + .+.+.+++++.+++|+.+++.++++++|+|.+     +..++||++||..+..+.+  
T Consensus        81 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~~iv~~sS~~~~~~~~--  153 (252)
T PRK07035         81 ERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKE-----QGGGSIVNVASVNGVSPGD--  153 (252)
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-----CCCcEEEEECchhhcCCCC--
Confidence            999999999999997532  2 26778889999999999999999999999987     4468999999998876655  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----chhHhHHHHHHHhhc
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----GILRGFCNTVGKLVL  256 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~~~~~  256 (313)
                                   ++..|++||++++.++++++.++.++|  |+||+|+||+++|++....    ..........+..+.
T Consensus       154 -------------~~~~Y~~sK~al~~~~~~l~~e~~~~g--i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  218 (252)
T PRK07035        154 -------------FQGIYSITKAAVISMTKAFAKECAPFG--IRVNALLPGLTDTKFASALFKNDAILKQALAHIPLRRH  218 (252)
T ss_pred             -------------CCcchHHHHHHHHHHHHHHHHHHhhcC--EEEEEEeeccccCcccccccCCHHHHHHHHccCCCCCc
Confidence                         678899999999999999999999999  9999999999999986542    111222233344567


Q ss_pred             CChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          257 KNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       257 ~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      .+|+|+|+.++||++ +...+++|+++..||+.
T Consensus       219 ~~~~~va~~~~~l~~-~~~~~~~g~~~~~dgg~  250 (252)
T PRK07035        219 AEPSEMAGAVLYLAS-DASSYTTGECLNVDGGY  250 (252)
T ss_pred             CCHHHHHHHHHHHhC-ccccCccCCEEEeCCCc
Confidence            899999999999998 77889999999988764

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=1.5e-38  Score=290.13  Aligned_cols=278  Identities=33%  Similarity=0.499  Sum_probs=217.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcC-CEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRG-VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      .+|++|||||++|||+++|++|+++| ++|++++|+.++.++..+++..  ++.++.++.+|+++.++++++++++.+.+
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   79 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGM--PKDSYTIMHLDLGSLDSVRQFVQQFRESG   79 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcC--CCCeEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            47899999999999999999999999 9999999998888777766642  24568889999999999999999998888


Q ss_pred             CCeeEEEEcccCCCCC---CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccc-----c
Q 021391          107 RPLNILINNAGIMASP---FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAY-----S  178 (313)
Q Consensus       107 g~id~lv~~ag~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~-----~  178 (313)
                      +++|++|||||+..+.   .+.+.+++++++++|+.+++.+++.++|.|.+..   ...++||++||.++....     +
T Consensus        80 ~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~---~~~g~IV~vsS~~~~~~~~~~~~~  156 (314)
T TIGR01289        80 RPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSP---NKDKRLIIVGSITGNTNTLAGNVP  156 (314)
T ss_pred             CCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCC---CCCCeEEEEecCccccccCCCcCC
Confidence            9999999999975432   2567889999999999999999999999998731   124799999999875431     1


Q ss_pred             CCCCCCCCC-------------CCCCCCccccchHhHHHHHHHHHHHHHHhc-cCCCcEEEEEeeCccc-ccCCccccc-
Q 021391          179 EGIRFDKIN-------------DESAYNSFGAYGQSKLANILHAKELAKHLK-EDGVNITANSLHPGSI-VTNLFRYNG-  242 (313)
Q Consensus       179 ~~~~~~~~~-------------~~~~~~~~~~Y~asK~a~~~l~~~la~e~~-~~g~~I~vn~i~PG~v-~t~~~~~~~-  242 (313)
                      ...++.++.             +...++++.+|++||+|+..+++.+++++. +.|  |+|++|+||.| +|++.+... 
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~g--i~v~~v~PG~v~~T~l~~~~~~  234 (314)
T TIGR01289       157 PKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETG--ITFASLYPGCIADTGLFREHVP  234 (314)
T ss_pred             CcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCC--eEEEEecCCcccCCcccccccH
Confidence            011122221             234566778999999999999999999995 467  99999999999 699876421 


Q ss_pred             hhHhH---HHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcc-----cCCCccCCCHHHHHHHHHHHHhhhC
Q 021391          243 ILRGF---CNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNI-----YKPNSQGQNMELAKKLWDFSMNLVK  313 (313)
Q Consensus       243 ~~~~~---~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~  313 (313)
                      .....   ..........++++.|+.+++++..+. ...+|.|+..++.     ..++..+.|++.+++||++++++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~  312 (314)
T TIGR01289       235 LFRTLFPPFQKYITKGYVSEEEAGERLAQVVSDPK-LKKSGVYWSWGNRQESFVNQLSEEVSDDSKASKMWDLSEKLVG  312 (314)
T ss_pred             HHHHHHHHHHHHHhccccchhhhhhhhHHhhcCcc-cCCCceeeecCCcccccccCCChhhcCHHHHHHHHHHHHHHhc
Confidence            11111   111112235789999999999998433 3468999986443     3577788999999999999999864

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.3e-39  Score=284.68  Aligned_cols=243  Identities=22%  Similarity=0.209  Sum_probs=206.0

Q ss_pred             CCCCCCCEEEEeCCCC-chHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           24 GIDGTGLTAIVTGASS-GIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        24 ~~~~~gk~~lItGas~-giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      ...+++|++|||||+| |||+++++.|+++|++|++++|+.++.++..+++....+..++.++++|++++++++++++++
T Consensus        12 ~~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   91 (262)
T PRK07831         12 HGLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAA   91 (262)
T ss_pred             ccccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            3446789999999985 999999999999999999999998888887777766444457889999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCC-C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          103 NSQGRPLNILINNAGIMAS-P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~-~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      .+.+|++|++|||+|.... + .+.+.++|++.+++|+.+++.+++.+.|.|.+.    ...++||+++|..+..+.+  
T Consensus        92 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~~g~iv~~ss~~~~~~~~--  165 (262)
T PRK07831         92 VERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRAR----GHGGVIVNNASVLGWRAQH--  165 (262)
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc----CCCcEEEEeCchhhcCCCC--
Confidence            9999999999999997543 2 267789999999999999999999999999873    2268999999988876655  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc---chhHhHHHHHHHhhcC
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN---GILRGFCNTVGKLVLK  257 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~  257 (313)
                                   +...|+++|+|+++++++++.|+.++|  ||||+|+||+++|++....   +....+....+..+..
T Consensus       166 -------------~~~~Y~~sKaal~~~~~~la~e~~~~g--I~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~r~~  230 (262)
T PRK07831        166 -------------GQAHYAAAKAGVMALTRCSALEAAEYG--VRINAVAPSIAMHPFLAKVTSAELLDELAAREAFGRAA  230 (262)
T ss_pred             -------------CCcchHHHHHHHHHHHHHHHHHhCccC--eEEEEEeeCCccCcccccccCHHHHHHHHhcCCCCCCc
Confidence                         677899999999999999999999999  9999999999999986532   1122233333445678


Q ss_pred             ChHHHHHHHHHHHccCCccCCCceeecCCcc
Q 021391          258 NIPQGAATTCYVALHPQVQGVSGEYFSDSNI  288 (313)
Q Consensus       258 ~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~  288 (313)
                      +|+|+|+.++||++ +.+.++||+++.++++
T Consensus       231 ~p~~va~~~~~l~s-~~~~~itG~~i~v~~~  260 (262)
T PRK07831        231 EPWEVANVIAFLAS-DYSSYLTGEVVSVSSQ  260 (262)
T ss_pred             CHHHHHHHHHHHcC-chhcCcCCceEEeCCC
Confidence            99999999999998 7789999999998873

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-39  Score=287.79  Aligned_cols=237  Identities=20%  Similarity=0.199  Sum_probs=198.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      +.++||++|||||++|||++++++|+++|++|++++|+.++++.+.+++     +.++.++++|++++++++.+++++.+
T Consensus         2 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (263)
T PRK06200          2 GWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF-----GDHVLVVEGDVTSYADNQRAVDQTVD   76 (263)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999999987776655443     34688899999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCC--CC-ccCccc----hhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccc
Q 021391          105 QGRPLNILINNAGIMAS--PF-MLSKDN----IELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAY  177 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~--~~-~~~~~~----~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~  177 (313)
                      +++++|++|||+|+...  +. +.+.++    |++++++|+.+++.+++.+.|.|.+.      +|+||+++|.++..+.
T Consensus        77 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~g~iv~~sS~~~~~~~  150 (263)
T PRK06200         77 AFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS------GGSMIFTLSNSSFYPG  150 (263)
T ss_pred             hcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc------CCEEEEECChhhcCCC
Confidence            99999999999997542  22 444444    88999999999999999999998762      5899999999987765


Q ss_pred             cCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc-------------hh
Q 021391          178 SEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG-------------IL  244 (313)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~-------------~~  244 (313)
                      +               +..+|++||+|++.++++++.++++ +  ||||+|+||+++|++.....             ..
T Consensus       151 ~---------------~~~~Y~~sK~a~~~~~~~la~el~~-~--Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~  212 (263)
T PRK06200        151 G---------------GGPLYTASKHAVVGLVRQLAYELAP-K--IRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLA  212 (263)
T ss_pred             C---------------CCchhHHHHHHHHHHHHHHHHHHhc-C--cEEEEEeCCccccCCcCccccCCCCcccccccchh
Confidence            5               5678999999999999999999987 5  99999999999999754210             11


Q ss_pred             HhHHHHHHHhhcCChHHHHHHHHHHHccCC-ccCCCceeecCCcccCC
Q 021391          245 RGFCNTVGKLVLKNIPQGAATTCYVALHPQ-VQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       245 ~~~~~~~~~~~~~~~~eva~~~~~l~~~~~-~~~~tG~~~~~~~~~~~  291 (313)
                      .......+..+..+|+|+|+.++||++ +. +.++||+.+..||+...
T Consensus       213 ~~~~~~~p~~r~~~~~eva~~~~fl~s-~~~~~~itG~~i~vdgG~~~  259 (263)
T PRK06200        213 DMIAAITPLQFAPQPEDHTGPYVLLAS-RRNSRALTGVVINADGGLGI  259 (263)
T ss_pred             HHhhcCCCCCCCCCHHHHhhhhhheec-ccccCcccceEEEEcCceee
Confidence            122233455678899999999999998 66 89999999998877544

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-39  Score=283.35  Aligned_cols=240  Identities=24%  Similarity=0.229  Sum_probs=206.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      +.+++|++|||||++|||++++++|+++|++|++++|+.+..++..+++...  +.++.++.+|+++.+++.++++++.+
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~   80 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREA--GGEALFVACDVTRDAEVKALVEQTIA   80 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            5688999999999999999999999999999999999988888777777554  45789999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCC--C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          105 QGRPLNILINNAGIMAS--P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~--~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      .++++|++|||+|....  + .+.+.+++++++++|+.+++.++++++|.|.+     +..++||++||..+..+.+   
T Consensus        81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~~~ii~~sS~~~~~~~~---  152 (253)
T PRK06172         81 AYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLA-----QGGGAIVNTASVAGLGAAP---  152 (253)
T ss_pred             HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-----cCCcEEEEECchhhccCCC---
Confidence            99999999999997543  2 26788999999999999999999999999987     3468999999998887766   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc-----hhHhHHHHHHHhhc
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG-----ILRGFCNTVGKLVL  256 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~-----~~~~~~~~~~~~~~  256 (313)
                                  ++..|+++|++++.++++++.++.++|  |+||+|+||+++|++.....     ....+....+..+.
T Consensus       153 ------------~~~~Y~~sKaa~~~~~~~la~e~~~~~--i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (253)
T PRK06172        153 ------------KMSIYAASKHAVIGLTKSAAIEYAKKG--IRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRI  218 (253)
T ss_pred             ------------CCchhHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCCCc
Confidence                        678999999999999999999999999  99999999999999866431     11112222344566


Q ss_pred             CChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          257 KNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       257 ~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      .+|+|+++.++||++ +...++||+++..||+.
T Consensus       219 ~~p~~ia~~~~~l~~-~~~~~~~G~~i~~dgg~  250 (253)
T PRK06172        219 GKVEEVASAVLYLCS-DGASFTTGHALMVDGGA  250 (253)
T ss_pred             cCHHHHHHHHHHHhC-ccccCcCCcEEEECCCc
Confidence            799999999999998 67889999999988764

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.3e-39  Score=293.84  Aligned_cols=247  Identities=17%  Similarity=0.180  Sum_probs=189.4

Q ss_pred             cCCCCCCCEEEEeCCC--CchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHH--------hCCCC-----ceEEEEc
Q 021391           23 QGIDGTGLTAIVTGAS--SGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVK--------EIPSA-----KVDAMEL   87 (313)
Q Consensus        23 ~~~~~~gk~~lItGas--~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~--------~~~~~-----~~~~~~~   87 (313)
                      +.++++||++|||||+  +|||+++|+.|+++|++|++.++.+ .+....+....        ...+.     ++..+..
T Consensus         2 ~~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~   80 (299)
T PRK06300          2 LKIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDA   80 (299)
T ss_pred             CCcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhh
Confidence            4677899999999996  9999999999999999999987641 11111110000        00011     1111223


Q ss_pred             cCCCH------------------HHHHHHHHHHhhcCCCeeEEEEcccCCC---CCC-ccCccchhhhhhhhhhHHHHHH
Q 021391           88 DVSSL------------------ASVRKFASEYNSQGRPLNILINNAGIMA---SPF-MLSKDNIELQFATNHLGHFLLT  145 (313)
Q Consensus        88 D~s~~------------------~~v~~~~~~~~~~~g~id~lv~~ag~~~---~~~-~~~~~~~~~~~~~n~~~~~~l~  145 (313)
                      |+++.                  .+++++++++.+++|++|+||||||...   .+. +.+.++|++.+++|+.++++++
T Consensus        81 d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~  160 (299)
T PRK06300         81 SFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLL  160 (299)
T ss_pred             hcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence            33333                  3689999999999999999999998643   233 7889999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCCCCCCccc-cchHhHHHHHHHHHHHHHHhcc-CCCcE
Q 021391          146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFG-AYGQSKLANILHAKELAKHLKE-DGVNI  223 (313)
Q Consensus       146 ~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~asK~a~~~l~~~la~e~~~-~g~~I  223 (313)
                      ++++|+|.+       +|+||+++|+.+..+.|               .+. .|++||+|+++|+++|+.|+++ +|  |
T Consensus       161 ~a~~p~m~~-------~G~ii~iss~~~~~~~p---------------~~~~~Y~asKaAl~~lt~~la~el~~~~g--I  216 (299)
T PRK06300        161 SHFGPIMNP-------GGSTISLTYLASMRAVP---------------GYGGGMSSAKAALESDTKVLAWEAGRRWG--I  216 (299)
T ss_pred             HHHHHHhhc-------CCeEEEEeehhhcCcCC---------------CccHHHHHHHHHHHHHHHHHHHHhCCCCC--e
Confidence            999999975       57999999998877666               443 7999999999999999999987 48  9


Q ss_pred             EEEEeeCcccccCCccccc----hhHhHHHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCCccC
Q 021391          224 TANSLHPGSIVTNLFRYNG----ILRGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQG  295 (313)
Q Consensus       224 ~vn~i~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~~~  295 (313)
                      |||+|+||+++|++.....    .........+..+..+|+|+|+.++||++ +.+.++||+.+..+|+....+..
T Consensus       217 rVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s-~~~~~itG~~i~vdGG~~~~~~~  291 (299)
T PRK06300        217 RVNTISAGPLASRAGKAIGFIERMVDYYQDWAPLPEPMEAEQVGAAAAFLVS-PLASAITGETLYVDHGANVMGIG  291 (299)
T ss_pred             EEEEEEeCCccChhhhcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-ccccCCCCCEEEECCCcceecCC
Confidence            9999999999999864321    11112223344567899999999999998 78899999999998887665544

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=7.7e-39  Score=283.35  Aligned_cols=244  Identities=24%  Similarity=0.271  Sum_probs=208.2

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      +.++++||++|||||++|||++++++|+++|++|++++|+.++.++..+.+...  +.++.++.+|++|+++++.+++++
T Consensus         4 ~~~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~   81 (255)
T PRK07523          4 NLFDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ--GLSAHALAFDVTDHDAVRAAIDAF   81 (255)
T ss_pred             cccCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CceEEEEEccCCCHHHHHHHHHHH
Confidence            344689999999999999999999999999999999999988887777766554  457889999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCC-CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          103 NSQGRPLNILINNAGIMAS-PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~-~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      .+.++++|++|||+|.... +. +.+.+++++++++|+.+++++++++.+.|.+     +..++||++||..+..+.+  
T Consensus        82 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~g~iv~iss~~~~~~~~--  154 (255)
T PRK07523         82 EAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIA-----RGAGKIINIASVQSALARP--  154 (255)
T ss_pred             HHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-----hCCeEEEEEccchhccCCC--
Confidence            9999999999999998643 22 6788999999999999999999999999987     3468999999988776655  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----hhHhHHHHHHHhhc
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----ILRGFCNTVGKLVL  256 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----~~~~~~~~~~~~~~  256 (313)
                                   .+..|+++|++++.++++++.+++++|  |+||+|+||+++|++.....    ....+....+..+.
T Consensus       155 -------------~~~~y~~sK~a~~~~~~~~a~e~~~~g--i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~  219 (255)
T PRK07523        155 -------------GIAPYTATKGAVGNLTKGMATDWAKHG--LQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRW  219 (255)
T ss_pred             -------------CCccHHHHHHHHHHHHHHHHHHhhHhC--eEEEEEEECcccCchhhhhccCHHHHHHHHhcCCCCCC
Confidence                         678999999999999999999999999  99999999999999865321    11222233445567


Q ss_pred             CChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          257 KNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       257 ~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      ..|+|+|++++||++ +.+.++||+.+..+++...
T Consensus       220 ~~~~dva~~~~~l~~-~~~~~~~G~~i~~~gg~~~  253 (255)
T PRK07523        220 GKVEELVGACVFLAS-DASSFVNGHVLYVDGGITA  253 (255)
T ss_pred             cCHHHHHHHHHHHcC-chhcCccCcEEEECCCeec
Confidence            889999999999998 7788999999988876543

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=1.1e-38  Score=282.56  Aligned_cols=244  Identities=25%  Similarity=0.291  Sum_probs=210.5

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      .+++++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+++.++.++.+|++++++++++++++
T Consensus         3 ~~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   82 (257)
T PRK09242          3 HRWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWV   82 (257)
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999999888888888877666678999999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          103 NSQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      .+.++++|++|||+|.....  .+.+.+++++.+++|+.+++.+++++.|+|.+     +..++||++||.++..+.+  
T Consensus        83 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~~ii~~sS~~~~~~~~--  155 (257)
T PRK09242         83 EDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQ-----HASSAIVNIGSVSGLTHVR--  155 (257)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh-----cCCceEEEECccccCCCCC--
Confidence            99999999999999975432  26788999999999999999999999999987     3468999999998877655  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----hhHhHHHHHHHhhc
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----ILRGFCNTVGKLVL  256 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----~~~~~~~~~~~~~~  256 (313)
                                   ....|+++|++++.++++++.++.+.|  |+||+|+||+++|++.....    .........+..+.
T Consensus       156 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~  220 (257)
T PRK09242        156 -------------SGAPYGMTKAALLQMTRNLAVEWAEDG--IRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRV  220 (257)
T ss_pred             -------------CCcchHHHHHHHHHHHHHHHHHHHHhC--eEEEEEEECCCCCcccccccCChHHHHHHHhcCCCCCC
Confidence                         667899999999999999999999988  99999999999999865431    11222223344556


Q ss_pred             CChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          257 KNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       257 ~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      .+|+|++.+++||++ +...+++|+.+..++..
T Consensus       221 ~~~~~va~~~~~l~~-~~~~~~~g~~i~~~gg~  252 (257)
T PRK09242        221 GEPEEVAAAVAFLCM-PAASYITGQCIAVDGGF  252 (257)
T ss_pred             cCHHHHHHHHHHHhC-cccccccCCEEEECCCe
Confidence            799999999999998 67788999998877653

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=8.5e-39  Score=290.00  Aligned_cols=239  Identities=24%  Similarity=0.272  Sum_probs=201.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCch--hHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMA--AGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .++||++|||||++|||++++++|+++|++|++++++.+  ..++..+.+...  +.++.++.+|+++.++++++++++.
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~  129 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE--GRKAVALPGDLKDEAFCRQLVERAV  129 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHHHHHHH
Confidence            478999999999999999999999999999999987643  344455555443  4578899999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCC--CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          104 SQGRPLNILINNAGIMAS--PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      +.++++|+||||||....  +. +.+.++|++++++|+.++++++++++|+|.+       +++||++||..+..+.+  
T Consensus       130 ~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~~~iv~~sS~~~~~~~~--  200 (300)
T PRK06128        130 KELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP-------GASIINTGSIQSYQPSP--  200 (300)
T ss_pred             HHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc-------CCEEEEECCccccCCCC--
Confidence            999999999999997532  22 6788999999999999999999999999865       57999999999887655  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccch----hHhHHHHHHHhhc
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI----LRGFCNTVGKLVL  256 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~----~~~~~~~~~~~~~  256 (313)
                                   ....|++||+|++.|+++++.++.++|  |+||+|+||+++|++......    ...+....+..+.
T Consensus       201 -------------~~~~Y~asK~a~~~~~~~la~el~~~g--I~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~~r~  265 (300)
T PRK06128        201 -------------TLLDYASTKAAIVAFTKALAKQVAEKG--IRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPMKRP  265 (300)
T ss_pred             -------------CchhHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCCCCC
Confidence                         567899999999999999999999999  999999999999998643211    1122223345667


Q ss_pred             CChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          257 KNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       257 ~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      ..|+|+|..++||++ +.+.++||+.+.++|+...
T Consensus       266 ~~p~dva~~~~~l~s-~~~~~~~G~~~~v~gg~~~  299 (300)
T PRK06128        266 GQPVEMAPLYVLLAS-QESSYVTGEVFGVTGGLLL  299 (300)
T ss_pred             cCHHHHHHHHHHHhC-ccccCccCcEEeeCCCEeC
Confidence            899999999999998 6788999999998877543

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-38  Score=282.91  Aligned_cols=241  Identities=21%  Similarity=0.253  Sum_probs=202.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .|++++|++|||||++|||+++++.|+++|++|++++|+.++.++..+++.... +.++.++.+|++++++++.++++  
T Consensus         2 ~~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~--   78 (259)
T PRK06125          2 DLHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAH-GVDVAVHALDLSSPEAREQLAAE--   78 (259)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHH--
Confidence            456889999999999999999999999999999999999888888777776543 45788999999999999888765  


Q ss_pred             hcCCCeeEEEEcccCCCC-C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          104 SQGRPLNILINNAGIMAS-P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~-~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                        ++++|++|||+|.... + .+.+.++|++++++|+.+++++++++.|.|.+     ...++||++||..+..+.+   
T Consensus        79 --~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~g~iv~iss~~~~~~~~---  148 (259)
T PRK06125         79 --AGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKA-----RGSGVIVNVIGAAGENPDA---  148 (259)
T ss_pred             --hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH-----cCCcEEEEecCccccCCCC---
Confidence              4789999999997643 2 27788999999999999999999999999987     3468999999988776544   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc------------chhHhHHH
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN------------GILRGFCN  249 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~------------~~~~~~~~  249 (313)
                                  .+..|+++|+|+++++++++.|+.++|  ||||+|+||+++|++....            .....+..
T Consensus       149 ------------~~~~y~ask~al~~~~~~la~e~~~~g--i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (259)
T PRK06125        149 ------------DYICGSAGNAALMAFTRALGGKSLDDG--VRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLA  214 (259)
T ss_pred             ------------CchHhHHHHHHHHHHHHHHHHHhCccC--eEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhc
Confidence                        567899999999999999999999999  9999999999999964321            01112222


Q ss_pred             HHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCC
Q 021391          250 TVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPN  292 (313)
Q Consensus       250 ~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~  292 (313)
                      ..+..+..+|+|+|+.++||++ +.+.++||+.+..||+..+.
T Consensus       215 ~~~~~~~~~~~~va~~~~~l~~-~~~~~~~G~~i~vdgg~~~~  256 (259)
T PRK06125        215 GLPLGRPATPEEVADLVAFLAS-PRSGYTSGTVVTVDGGISAR  256 (259)
T ss_pred             cCCcCCCcCHHHHHHHHHHHcC-chhccccCceEEecCCeeec
Confidence            3344567799999999999997 78899999999988875543

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=2e-38  Score=280.83  Aligned_cols=241  Identities=26%  Similarity=0.317  Sum_probs=206.3

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      ..+.+++|+++||||++|||++++++|+++|++|++++|+.+..+...+++...  +.++.++.+|+++.+++.++++.+
T Consensus         5 ~~~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~   82 (255)
T PRK06113          5 DNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFA   82 (255)
T ss_pred             cccCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHH
Confidence            345688999999999999999999999999999999999988888777777554  457889999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCC-CCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          103 NSQGRPLNILINNAGIMAS-PFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      .+.++++|++|||+|.... +.+.+.+++++.+++|+.+++++++++.|+|.+     ...++||++||.++..+.+   
T Consensus        83 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~~iv~isS~~~~~~~~---  154 (255)
T PRK06113         83 LSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEK-----NGGGVILTITSMAAENKNI---  154 (255)
T ss_pred             HHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHh-----cCCcEEEEEecccccCCCC---
Confidence            9999999999999997643 336778899999999999999999999999976     3467999999998877655   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc---chhHhHHHHHHHhhcCC
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN---GILRGFCNTVGKLVLKN  258 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~~  258 (313)
                                  +...|+++|+|++.++++++.++.+.|  |+||+|+||+++|++....   .......+..+..+..+
T Consensus       155 ------------~~~~Y~~sK~a~~~~~~~la~~~~~~~--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (255)
T PRK06113        155 ------------NMTSYASSKAAASHLVRNMAFDLGEKN--IRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQ  220 (255)
T ss_pred             ------------CcchhHHHHHHHHHHHHHHHHHhhhhC--eEEEEEecccccccccccccCHHHHHHHHhcCCCCCCcC
Confidence                        667899999999999999999999999  9999999999999986542   11122223333455679


Q ss_pred             hHHHHHHHHHHHccCCccCCCceeecCCcc
Q 021391          259 IPQGAATTCYVALHPQVQGVSGEYFSDSNI  288 (313)
Q Consensus       259 ~~eva~~~~~l~~~~~~~~~tG~~~~~~~~  288 (313)
                      |+|++++++||++ +.+.++||+++..+|+
T Consensus       221 ~~d~a~~~~~l~~-~~~~~~~G~~i~~~gg  249 (255)
T PRK06113        221 PQDIANAALFLCS-PAASWVSGQILTVSGG  249 (255)
T ss_pred             HHHHHHHHHHHcC-ccccCccCCEEEECCC
Confidence            9999999999997 8889999999998775

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=7.9e-39  Score=284.09  Aligned_cols=229  Identities=25%  Similarity=0.257  Sum_probs=194.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+.             ..++.++++|++|+++++++++++.++
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~-------------~~~~~~~~~D~~~~~~i~~~~~~~~~~   69 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS-------------YNDVDYFKVDVSNKEQVIKGIDYVISK   69 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc-------------cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999998543             125788999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCC-CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          106 GRPLNILINNAGIMAS-PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~-~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      ++++|++|||||+... +. +.+.++|++++++|+.+++.++++++|+|.+     +..++||++||..+..+.+     
T Consensus        70 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~g~iv~isS~~~~~~~~-----  139 (258)
T PRK06398         70 YGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLK-----QDKGVIINIASVQSFAVTR-----  139 (258)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH-----cCCeEEEEeCcchhccCCC-----
Confidence            9999999999998643 22 6788999999999999999999999999987     4478999999998877655     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----------hh---HhHHHH
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----------IL---RGFCNT  250 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----------~~---~~~~~~  250 (313)
                                +..+|+++|+|++.++++++.|+.+ +  |+||+|+||+++|++.....          ..   ..+...
T Consensus       140 ----------~~~~Y~~sKaal~~~~~~la~e~~~-~--i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (258)
T PRK06398        140 ----------NAAAYVTSKHAVLGLTRSIAVDYAP-T--IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEM  206 (258)
T ss_pred             ----------CCchhhhhHHHHHHHHHHHHHHhCC-C--CEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhc
Confidence                      6789999999999999999999985 4  99999999999999764320          00   111122


Q ss_pred             HHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          251 VGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       251 ~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      .+..+..+|+|+|+.++||++ +.+.++||+.+..||+...
T Consensus       207 ~~~~~~~~p~eva~~~~~l~s-~~~~~~~G~~i~~dgg~~~  246 (258)
T PRK06398        207 HPMKRVGKPEEVAYVVAFLAS-DLASFITGECVTVDGGLRA  246 (258)
T ss_pred             CCcCCCcCHHHHHHHHHHHcC-cccCCCCCcEEEECCcccc
Confidence            344567799999999999998 7788999999987776543

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=1.8e-38  Score=279.67  Aligned_cols=240  Identities=21%  Similarity=0.231  Sum_probs=200.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      |+++||++|||||++|||+++|++|+++|++|++++|+..  ++..+.+...  +.++.++.+|+++++++..+++++.+
T Consensus         1 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (248)
T TIGR01832         1 FSLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEAL--GRRFLSLTADLSDIEAIKALVDSAVE   76 (248)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999752  3334444332  45688999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          105 QGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      .++++|++|||+|.....  .+.+.+++++.+++|+.+++.++++++|.|.+.    ...++||++||..+..+.+    
T Consensus        77 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~~~g~iv~~sS~~~~~~~~----  148 (248)
T TIGR01832        77 EFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQ----GRGGKIINIASMLSFQGGI----  148 (248)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc----CCCeEEEEEecHHhccCCC----
Confidence            999999999999986542  266778999999999999999999999999872    2257999999998876655    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----hhHhHHHHHHHhhcCC
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----ILRGFCNTVGKLVLKN  258 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~  258 (313)
                                 ....|+++|++++.++++++.++.++|  |+||+|+||+++|++.....    .........+..++.+
T Consensus       149 -----------~~~~Y~~sKaa~~~~~~~la~e~~~~g--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (248)
T TIGR01832       149 -----------RVPSYTASKHGVAGLTKLLANEWAAKG--INVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGT  215 (248)
T ss_pred             -----------CCchhHHHHHHHHHHHHHHHHHhCccC--cEEEEEEECcCcCcchhccccChHHHHHHHhcCCCCCCcC
Confidence                       567899999999999999999999999  99999999999999765321    1112233344556789


Q ss_pred             hHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          259 IPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       259 ~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      |+|+|++++||++ +...+++|+++..||+..
T Consensus       216 ~~dva~~~~~l~s-~~~~~~~G~~i~~dgg~~  246 (248)
T TIGR01832       216 PDDIGGPAVFLAS-SASDYVNGYTLAVDGGWL  246 (248)
T ss_pred             HHHHHHHHHHHcC-ccccCcCCcEEEeCCCEe
Confidence            9999999999998 778899999999887643

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=1.8e-38  Score=281.08  Aligned_cols=239  Identities=22%  Similarity=0.284  Sum_probs=204.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      ||++|||||++|||+++++.|+++|++|++++|+.+..+....++...  +.++.++++|+++++++.++++++.+++++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD--GGKAIAVKADVSDRDQVFAAVRQVVDTFGD   79 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            789999999999999999999999999999999988888777777554  457889999999999999999999999999


Q ss_pred             eeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          109 LNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       109 id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                      +|++|||+|+.... . +.+.+++++.+++|+.+++.+++.+.+.|.+.    ..+++||++||..+..+.+        
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~~~~~iv~~sS~~~~~~~~--------  147 (256)
T PRK08643         80 LNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKL----GHGGKIINATSQAGVVGNP--------  147 (256)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc----CCCCEEEEECccccccCCC--------
Confidence            99999999976432 2 66788999999999999999999999999763    2357999999998887766        


Q ss_pred             CCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc------------h-hHhHHHHHHH
Q 021391          187 NDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG------------I-LRGFCNTVGK  253 (313)
Q Consensus       187 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~------------~-~~~~~~~~~~  253 (313)
                             ....|+++|++++.+++.++.++.+.|  |+||+|+||+++|++.....            + ...+....+.
T Consensus       148 -------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (256)
T PRK08643        148 -------ELAVYSSTKFAVRGLTQTAARDLASEG--ITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITL  218 (256)
T ss_pred             -------CCchhHHHHHHHHHHHHHHHHHhcccC--cEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCC
Confidence                   567899999999999999999999999  99999999999999865310            0 1122233445


Q ss_pred             hhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          254 LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       254 ~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      .+..+|+|+|+.++||++ +.+.++||+.+..|++..+
T Consensus       219 ~~~~~~~~va~~~~~L~~-~~~~~~~G~~i~vdgg~~~  255 (256)
T PRK08643        219 GRLSEPEDVANCVSFLAG-PDSDYITGQTIIVDGGMVF  255 (256)
T ss_pred             CCCcCHHHHHHHHHHHhC-ccccCccCcEEEeCCCeec
Confidence            567889999999999998 7889999999998887654

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=8.7e-39  Score=278.14  Aligned_cols=222  Identities=24%  Similarity=0.310  Sum_probs=196.1

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      ..-+.+|++||||||++|+||++|.+||++|+++++++.|.+..++..+++++.  + ++..+.||+++.+++.++++++
T Consensus        32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~--g-~~~~y~cdis~~eei~~~a~~V  108 (300)
T KOG1201|consen   32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI--G-EAKAYTCDISDREEIYRLAKKV  108 (300)
T ss_pred             chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc--C-ceeEEEecCCCHHHHHHHHHHH
Confidence            456789999999999999999999999999999999999999999999998875  3 8999999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          103 NSQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      +++.|.+|+||||||+.+..  ++.+++++++++++|+.|+++.+|+|+|.|.+     +.+|.||.++|.+|..+.+  
T Consensus       109 k~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~-----~~~GHIV~IaS~aG~~g~~--  181 (300)
T KOG1201|consen  109 KKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLE-----NNNGHIVTIASVAGLFGPA--  181 (300)
T ss_pred             HHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHh-----cCCceEEEehhhhcccCCc--
Confidence            99999999999999998763  38999999999999999999999999999999     6689999999999999877  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCc-EEEEEeeCcccccCCccccchhHhHHHHHHHhhcCCh
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVN-ITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNI  259 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~-I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  259 (313)
                                   +...|++||+|+.+|+++|..|+...+.. |+...+||++++|+|.......+.+      .-.-+|
T Consensus       182 -------------gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~~~~~~l------~P~L~p  242 (300)
T KOG1201|consen  182 -------------GLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDGATPFPTL------APLLEP  242 (300)
T ss_pred             -------------cchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCCCCCCccc------cCCCCH
Confidence                         78899999999999999999999876553 9999999999999998752111111      113568


Q ss_pred             HHHHHHHHHHHccC
Q 021391          260 PQGAATTCYVALHP  273 (313)
Q Consensus       260 ~eva~~~~~l~~~~  273 (313)
                      +++|+.++..+..+
T Consensus       243 ~~va~~Iv~ai~~n  256 (300)
T KOG1201|consen  243 EYVAKRIVEAILTN  256 (300)
T ss_pred             HHHHHHHHHHHHcC
Confidence            88888888877643

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=6.1e-39  Score=285.29  Aligned_cols=238  Identities=19%  Similarity=0.206  Sum_probs=195.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      |++++|+++||||++|||++++++|+++|++|++++|+.+.++++.+.    . +.++.++.+|+++.+++.++++++.+
T Consensus         1 m~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~----~-~~~~~~~~~D~~~~~~~~~~~~~~~~   75 (262)
T TIGR03325         1 MRLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA----H-GDAVVGVEGDVRSLDDHKEAVARCVA   75 (262)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh----c-CCceEEEEeccCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999987766554332    1 34688899999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCC--CC-ccCc----cchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccc
Q 021391          105 QGRPLNILINNAGIMAS--PF-MLSK----DNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAY  177 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~--~~-~~~~----~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~  177 (313)
                      .++++|+||||||+...  +. +.+.    +.|++.+++|+.+++.+++++.|.|.+     . +++||+++|..+..+.
T Consensus        76 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-----~-~g~iv~~sS~~~~~~~  149 (262)
T TIGR03325        76 AFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVA-----S-RGSVIFTISNAGFYPN  149 (262)
T ss_pred             HhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhh-----c-CCCEEEEeccceecCC
Confidence            99999999999997532  22 2232    478999999999999999999999976     2 4789999998887665


Q ss_pred             cCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc------------hhH
Q 021391          178 SEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG------------ILR  245 (313)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~------------~~~  245 (313)
                      +               ....|+++|+|++.|+++++.++++ +  ||||+|+||+++|++.....            ...
T Consensus       150 ~---------------~~~~Y~~sKaa~~~l~~~la~e~~~-~--irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~  211 (262)
T TIGR03325       150 G---------------GGPLYTAAKHAVVGLVKELAFELAP-Y--VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGD  211 (262)
T ss_pred             C---------------CCchhHHHHHHHHHHHHHHHHhhcc-C--eEEEEEecCCCcCCCccccccccccccccccchhh
Confidence            5               5678999999999999999999986 3  99999999999999864310            011


Q ss_pred             hHHHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          246 GFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       246 ~~~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      ......+..+..+|+|+|+.++||++++.+.++||+.+.+||+...
T Consensus       212 ~~~~~~p~~r~~~p~eva~~~~~l~s~~~~~~~tG~~i~vdgg~~~  257 (262)
T TIGR03325       212 MLKSVLPIGRMPDAEEYTGAYVFFATRGDTVPATGAVLNYDGGMGV  257 (262)
T ss_pred             hhhhcCCCCCCCChHHhhhheeeeecCCCcccccceEEEecCCeee
Confidence            1222345667889999999999999844567899999998876543

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=100.00  E-value=9.1e-38  Score=285.95  Aligned_cols=281  Identities=31%  Similarity=0.455  Sum_probs=218.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      +++.+|++|||||++|||++++++|+++|++|++++|+.++.++..+++...  +.++.++.+|+++.++++++++++.+
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~   79 (322)
T PRK07453          2 SQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIP--PDSYTIIHIDLGDLDSVRRFVDDFRA   79 (322)
T ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcc--CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            4568999999999999999999999999999999999998888777776432  45788999999999999999999888


Q ss_pred             cCCCeeEEEEcccCCCCC---CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccc-----
Q 021391          105 QGRPLNILINNAGIMASP---FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFA-----  176 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~-----  176 (313)
                      .++++|+||||||+....   .+.+.++++.++++|+.+++++++.++|.|.+..   ...++||++||..+...     
T Consensus        80 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~---~~~~riV~vsS~~~~~~~~~~~  156 (322)
T PRK07453         80 LGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSP---APDPRLVILGTVTANPKELGGK  156 (322)
T ss_pred             hCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCC---CCCceEEEEcccccCccccCCc
Confidence            778899999999976432   2567889999999999999999999999998731   11369999999876431     


Q ss_pred             --ccCCCCCCCCC-------------CCCCCCccccchHhHHHHHHHHHHHHHHhc-cCCCcEEEEEeeCccc-ccCCcc
Q 021391          177 --YSEGIRFDKIN-------------DESAYNSFGAYGQSKLANILHAKELAKHLK-EDGVNITANSLHPGSI-VTNLFR  239 (313)
Q Consensus       177 --~~~~~~~~~~~-------------~~~~~~~~~~Y~asK~a~~~l~~~la~e~~-~~g~~I~vn~i~PG~v-~t~~~~  239 (313)
                        .+...++++++             +...+.+..+|+.||.+.+.+++.+++++. ..|  |+||+++||.| .|++.+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~g--i~v~~v~PG~v~~t~~~~  234 (322)
T PRK07453        157 IPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTG--ITFSSLYPGCVADTPLFR  234 (322)
T ss_pred             cCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCC--eEEEEecCCcccCCcccc
Confidence              11111222221             123566778999999999999999999995 467  99999999999 588866


Q ss_pred             ccch-hHhHHH---HHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcc---------cCCCccCCCHHHHHHHHH
Q 021391          240 YNGI-LRGFCN---TVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNI---------YKPNSQGQNMELAKKLWD  306 (313)
Q Consensus       240 ~~~~-~~~~~~---~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~---------~~~~~~~~~~~~~~~~~~  306 (313)
                      .... ...+..   ........++++.++.+++++.++.. ..+|.|+..+..         ..+++.+.|++.+++||+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~y~~~~~~~~~~~~~~~~~~~~~a~d~~~~~~lw~  313 (322)
T PRK07453        235 NTPPLFQKLFPWFQKNITGGYVSQELAGERVAQVVADPEF-AQSGVHWSWGNRQKKDRKAFSQELSDRATDDDKARRLWD  313 (322)
T ss_pred             cCCHHHHHHHHHHHHHHhhceecHHHHhhHHHHhhcCccc-CCCCceeecCCCCCcCccccccccchhhcCHHHHHHHHH
Confidence            5321 111111   11122346788899999999885544 579999974322         356778899999999999


Q ss_pred             HHHhhhC
Q 021391          307 FSMNLVK  313 (313)
Q Consensus       307 ~~~~~~~  313 (313)
                      +++++++
T Consensus       314 ~s~~~~~  320 (322)
T PRK07453        314 LSAKLVG  320 (322)
T ss_pred             HHHHHhC
Confidence            9999864

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.8e-38  Score=280.24  Aligned_cols=238  Identities=22%  Similarity=0.283  Sum_probs=198.4

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHcCCEEEEEecC-----------chhHHHHHHHHHHhCCCCceEEEEccCCCH
Q 021391           26 DGTGLTAIVTGAS--SGIGTETARVLALRGVHVIMAVRN-----------MAAGKDVREAIVKEIPSAKVDAMELDVSSL   92 (313)
Q Consensus        26 ~~~gk~~lItGas--~giG~aia~~La~~G~~V~l~~r~-----------~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~   92 (313)
                      .++||++|||||+  +|||+++|++|+++|++|++++|+           .+..++..+++.+.  +.++.++++|+++.
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~   80 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKN--GVKVSSMELDLTQN   80 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhc--CCeEEEEEcCCCCH
Confidence            5889999999999  499999999999999999998643           12223333444433  56788999999999


Q ss_pred             HHHHHHHHHHhhcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECC
Q 021391           93 ASVRKFASEYNSQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSS  170 (313)
Q Consensus        93 ~~v~~~~~~~~~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS  170 (313)
                      +++.++++++.+++|++|++|||+|.....  .+.+.+++++++++|+.+++.+.++++|.|.+     +..|+||++||
T Consensus        81 ~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~g~iv~isS  155 (256)
T PRK12859         81 DAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDK-----KSGGRIINMTS  155 (256)
T ss_pred             HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh-----cCCeEEEEEcc
Confidence            999999999999999999999999976432  27788999999999999999999999999987     44789999999


Q ss_pred             ccccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHH
Q 021391          171 EAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNT  250 (313)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~  250 (313)
                      ..+..+.+               ++..|+++|++++.|+++++.++.++|  |+||+|+||+++|++.... ..+.+...
T Consensus       156 ~~~~~~~~---------------~~~~Y~~sK~a~~~l~~~la~~~~~~~--i~v~~v~PG~i~t~~~~~~-~~~~~~~~  217 (256)
T PRK12859        156 GQFQGPMV---------------GELAYAATKGAIDALTSSLAAEVAHLG--ITVNAINPGPTDTGWMTEE-IKQGLLPM  217 (256)
T ss_pred             cccCCCCC---------------CchHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEEccccCCCCCHH-HHHHHHhc
Confidence            98876655               678999999999999999999999999  9999999999999975421 12222233


Q ss_pred             HHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          251 VGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       251 ~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      .+..+..+|+|+|+.++||++ +...++||+++..|++.
T Consensus       218 ~~~~~~~~~~d~a~~~~~l~s-~~~~~~~G~~i~~dgg~  255 (256)
T PRK12859        218 FPFGRIGEPKDAARLIKFLAS-EEAEWITGQIIHSEGGF  255 (256)
T ss_pred             CCCCCCcCHHHHHHHHHHHhC-ccccCccCcEEEeCCCc
Confidence            344556789999999999997 77889999999988764

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-38  Score=280.34  Aligned_cols=246  Identities=20%  Similarity=0.220  Sum_probs=209.4

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      ++.+++.+|++|||||++|||++++++|+++|++|++++|+.++.++..+.+...  +.++.++++|+++.+++++++++
T Consensus         3 ~~~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~   80 (265)
T PRK07097          3 ENLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL--GIEAHGYVCDVTDEDGVQAMVSQ   80 (265)
T ss_pred             ccccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHH
Confidence            4677899999999999999999999999999999999999988888777776553  45789999999999999999999


Q ss_pred             HhhcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccC
Q 021391          102 YNSQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSE  179 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~  179 (313)
                      +.+.++++|+||||+|+....  .+.+.+++++++++|+.+++.+++.++|+|.+     ...++||++||..+..+.+ 
T Consensus        81 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~g~iv~isS~~~~~~~~-  154 (265)
T PRK07097         81 IEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIK-----KGHGKIINICSMMSELGRE-  154 (265)
T ss_pred             HHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh-----cCCcEEEEEcCccccCCCC-
Confidence            999999999999999986542  26788999999999999999999999999987     4478999999998876655 


Q ss_pred             CCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----------hhHhHHH
Q 021391          180 GIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----------ILRGFCN  249 (313)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----------~~~~~~~  249 (313)
                                    ....|+++|++++.++++++.++.++|  |+||+|+||+++|++.....          +......
T Consensus       155 --------------~~~~Y~~sKaal~~l~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  218 (265)
T PRK07097        155 --------------TVSAYAAAKGGLKMLTKNIASEYGEAN--IQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIA  218 (265)
T ss_pred             --------------CCccHHHHHHHHHHHHHHHHHHhhhcC--ceEEEEEeccccccchhhhhhccccccchhHHHHHHh
Confidence                          677899999999999999999999999  99999999999999764321          1111122


Q ss_pred             HHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCC
Q 021391          250 TVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPN  292 (313)
Q Consensus       250 ~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~  292 (313)
                      ..+..+..+|+|+|+.+++|++ +...+++|+.+..+++....
T Consensus       219 ~~~~~~~~~~~dva~~~~~l~~-~~~~~~~g~~~~~~gg~~~~  260 (265)
T PRK07097        219 KTPAARWGDPEDLAGPAVFLAS-DASNFVNGHILYVDGGILAY  260 (265)
T ss_pred             cCCccCCcCHHHHHHHHHHHhC-cccCCCCCCEEEECCCceec
Confidence            2234457789999999999998 66789999999887765443

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-38  Score=279.24  Aligned_cols=246  Identities=23%  Similarity=0.252  Sum_probs=205.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc-hhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM-AAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .++++|++|||||++|||+++|++|+++|++|++++|+. +..+...+++...  +.++.++.+|++|.+++.++++++.
T Consensus         3 ~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~   80 (261)
T PRK08936          3 SDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA--GGEAIAVKGDVTVESDVVNLIQTAV   80 (261)
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHH
Confidence            458999999999999999999999999999999998854 4455566666543  4578899999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          104 SQGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      +.++++|++|||+|..... . +.+.+++++.+++|+.+++++++.++|+|.+.    ...++||++||..+..+.+   
T Consensus        81 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~----~~~g~iv~~sS~~~~~~~~---  153 (261)
T PRK08936         81 KEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEH----DIKGNIINMSSVHEQIPWP---  153 (261)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc----CCCcEEEEEccccccCCCC---
Confidence            9999999999999976542 2 67889999999999999999999999999873    2358999999988776655   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--c--hhHhHHHHHHHhhcC
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--G--ILRGFCNTVGKLVLK  257 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--~--~~~~~~~~~~~~~~~  257 (313)
                                  .+.+|+++|+|++.++++++.++.+.|  |+||+|+||+++|++....  .  .........+..+..
T Consensus       154 ------------~~~~Y~~sKaa~~~~~~~la~e~~~~g--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (261)
T PRK08936        154 ------------LFVHYAASKGGVKLMTETLAMEYAPKG--IRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIG  219 (261)
T ss_pred             ------------CCcccHHHHHHHHHHHHHHHHHHhhcC--eEEEEEEECcCCCCccccccCCHHHHHHHHhcCCCCCCc
Confidence                        678999999999999999999999998  9999999999999986432  1  111122333445678


Q ss_pred             ChHHHHHHHHHHHccCCccCCCceeecCCcccCCCcc
Q 021391          258 NIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQ  294 (313)
Q Consensus       258 ~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~~  294 (313)
                      +|+|+++.++||++ +.+.++||+++..|++....+.
T Consensus       220 ~~~~va~~~~~l~s-~~~~~~~G~~i~~d~g~~~~~~  255 (261)
T PRK08936        220 KPEEIAAVAAWLAS-SEASYVTGITLFADGGMTLYPS  255 (261)
T ss_pred             CHHHHHHHHHHHcC-cccCCccCcEEEECCCcccCcc
Confidence            99999999999998 6788999999998877665444

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=4.9e-38  Score=282.00  Aligned_cols=243  Identities=22%  Similarity=0.211  Sum_probs=201.0

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      ...+++||++|||||++|||++++++|+++|++|++++|+.+..++..+++..   +.++.++++|++|+++++++++++
T Consensus        12 ~~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~   88 (280)
T PLN02253         12 PSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG---EPNVCFFHCDVTVEDDVSRAVDFT   88 (280)
T ss_pred             cccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC---CCceEEEEeecCCHHHHHHHHHHH
Confidence            34567899999999999999999999999999999999987776666555521   347889999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCC---C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccccc
Q 021391          103 NSQGRPLNILINNAGIMAS---P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYS  178 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~---~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~  178 (313)
                      .+.++++|+||||||....   . .+.+.+++++++++|+.+++++++++.|.|.+     ...|+||+++|..+..+.+
T Consensus        89 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-----~~~g~ii~isS~~~~~~~~  163 (280)
T PLN02253         89 VDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIP-----LKKGSIVSLCSVASAIGGL  163 (280)
T ss_pred             HHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHh-----cCCceEEEecChhhcccCC
Confidence            9999999999999997542   1 26778999999999999999999999999987     3468999999999876655


Q ss_pred             CCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----chhHhH----HHH
Q 021391          179 EGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----GILRGF----CNT  250 (313)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----~~~~~~----~~~  250 (313)
                                     ....|+++|+|++.++++++.|++++|  |+||+|+||+++|++....    ......    ...
T Consensus       164 ---------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  226 (280)
T PLN02253        164 ---------------GPHAYTGSKHAVLGLTRSVAAELGKHG--IRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAF  226 (280)
T ss_pred             ---------------CCcccHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcccccccccccccccchhhhhhhhHHH
Confidence                           456899999999999999999999999  9999999999999875321    000111    111


Q ss_pred             H----H-HhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          251 V----G-KLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       251 ~----~-~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      .    + ..+..+|+|+|++++||++ +.+.+++|+.+..+|+...
T Consensus       227 ~~~~~~l~~~~~~~~dva~~~~~l~s-~~~~~i~G~~i~vdgG~~~  271 (280)
T PLN02253        227 AGKNANLKGVELTVDDVANAVLFLAS-DEARYISGLNLMIDGGFTC  271 (280)
T ss_pred             hhcCCCCcCCCCCHHHHHHHHHhhcC-cccccccCcEEEECCchhh
Confidence            1    1 1234689999999999998 7788999999998877543

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.7e-38  Score=278.38  Aligned_cols=237  Identities=22%  Similarity=0.268  Sum_probs=194.2

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .+.++||+++||||++|||+++|++|+++|++|++++++.+..   .+++...    ++.++.+|++|+++++++++++.
T Consensus         2 ~~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~~----~~~~~~~Dl~~~~~~~~~~~~~~   74 (255)
T PRK06463          2 SMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELREK----GVFTIKCDVGNRDQVKKSKEVVE   74 (255)
T ss_pred             CCCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHhC----CCeEEEecCCCHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999988765432   2233221    47889999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCC-CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          104 SQGRPLNILINNAGIMAS-PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~-~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      +.++++|+||||+|+... +. +.+.+++++.+++|+.+++++++.++|.|.+     ++.++||++||..+..+..   
T Consensus        75 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~-----~~~g~iv~isS~~~~~~~~---  146 (255)
T PRK06463         75 KEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKL-----SKNGAIVNIASNAGIGTAA---  146 (255)
T ss_pred             HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHh-----cCCcEEEEEcCHHhCCCCC---
Confidence            999999999999998643 22 6678899999999999999999999999986     3478999999988764221   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc-------hhHhHHHHHHHh
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG-------ILRGFCNTVGKL  254 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~-------~~~~~~~~~~~~  254 (313)
                                 ++...|++||+|+++++++++.|+.+.|  |+||+|+||+++|++.....       ....+....+..
T Consensus       147 -----------~~~~~Y~asKaa~~~~~~~la~e~~~~~--i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (255)
T PRK06463        147 -----------EGTTFYAITKAGIIILTRRLAFELGKYG--IRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLK  213 (255)
T ss_pred             -----------CCccHhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcC
Confidence                       1457899999999999999999999999  99999999999999864321       111122233445


Q ss_pred             hcCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          255 VLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       255 ~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      +..+|+|+|+.++||++ +.+.++||+++..|++.
T Consensus       214 ~~~~~~~va~~~~~l~s-~~~~~~~G~~~~~dgg~  247 (255)
T PRK06463        214 TTGKPEDIANIVLFLAS-DDARYITGQVIVADGGR  247 (255)
T ss_pred             CCcCHHHHHHHHHHHcC-hhhcCCCCCEEEECCCe
Confidence            66799999999999997 77889999999877653

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-38  Score=281.37  Aligned_cols=242  Identities=23%  Similarity=0.206  Sum_probs=192.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      +|++||||| +|||+++|++|+ +|++|++++|+.+++++..+++...  +.++.++++|++|++++.++++++ +++++
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~   76 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREA--GFDVSTQEVDVSSRESVKALAATA-QTLGP   76 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHH-HhcCC
Confidence            589999998 699999999996 8999999999988877777776543  457889999999999999999988 56889


Q ss_pred             eeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccC---------
Q 021391          109 LNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSE---------  179 (313)
Q Consensus       109 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~---------  179 (313)
                      +|+||||||+..     ..+++++++++|+.+++++++.+.|.|.+       ++++|+++|.++..+...         
T Consensus        77 id~li~nAG~~~-----~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-------~g~iv~isS~~~~~~~~~~~~~~~~~~  144 (275)
T PRK06940         77 VTGLVHTAGVSP-----SQASPEAILKVDLYGTALVLEEFGKVIAP-------GGAGVVIASQSGHRLPALTAEQERALA  144 (275)
T ss_pred             CCEEEECCCcCC-----chhhHHHHHHHhhHHHHHHHHHHHHHHhh-------CCCEEEEEecccccCcccchhhhcccc
Confidence            999999999752     23679999999999999999999999976       478899999887654200         


Q ss_pred             CCCCCCCCCC-----C-CCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc------chhHhH
Q 021391          180 GIRFDKINDE-----S-AYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN------GILRGF  247 (313)
Q Consensus       180 ~~~~~~~~~~-----~-~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~------~~~~~~  247 (313)
                      ..+..++...     . ...++..|++||+|++.++++++.+++++|  ||||+|+||+++|++....      ......
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--Irvn~i~PG~v~T~~~~~~~~~~~~~~~~~~  222 (275)
T PRK06940        145 TTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERG--ARINSISPGIISTPLAQDELNGPRGDGYRNM  222 (275)
T ss_pred             ccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCC--eEEEEeccCcCcCccchhhhcCCchHHHHHH
Confidence            0011111000     0 002457899999999999999999999999  9999999999999986431      111223


Q ss_pred             HHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          248 CNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       248 ~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      ....+..+..+|+|+|++++||++ +.+.++||+.+.+||+..
T Consensus       223 ~~~~p~~r~~~peeia~~~~fL~s-~~~~~itG~~i~vdgg~~  264 (275)
T PRK06940        223 FAKSPAGRPGTPDEIAALAEFLMG-PRGSFITGSDFLVDGGAT  264 (275)
T ss_pred             hhhCCcccCCCHHHHHHHHHHHcC-cccCcccCceEEEcCCeE
Confidence            334455678899999999999998 888999999999887643

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.6e-38  Score=276.10  Aligned_cols=244  Identities=25%  Similarity=0.273  Sum_probs=204.3

Q ss_pred             chhccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHH
Q 021391           19 EEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKF   98 (313)
Q Consensus        19 ~~~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~   98 (313)
                      +....+++++||++|||||++|||++++++|+++|++|++++|+.+. .+...++    .+.++.++.+|+++++++.++
T Consensus         5 ~~~~~~~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~   79 (255)
T PRK06841          5 KQFDLAFDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAAQL----LGGNAKGLVCDVSDSQSVEAA   79 (255)
T ss_pred             ccchhhcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHh----hCCceEEEEecCCCHHHHHHH
Confidence            34455578999999999999999999999999999999999998753 2222222    234577899999999999999


Q ss_pred             HHHHhhcCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccc
Q 021391           99 ASEYNSQGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFA  176 (313)
Q Consensus        99 ~~~~~~~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~  176 (313)
                      ++++.+.++++|++|||+|..... . +.+.+++++++++|+.+++++++.+.|.|.+     ...++||++||..+..+
T Consensus        80 ~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~~iv~~sS~~~~~~  154 (255)
T PRK06841         80 VAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIA-----AGGGKIVNLASQAGVVA  154 (255)
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHh-----cCCceEEEEcchhhccC
Confidence            999999999999999999986432 2 6678899999999999999999999999987     34689999999988777


Q ss_pred             ccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc---chhHhHHHHHHH
Q 021391          177 YSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN---GILRGFCNTVGK  253 (313)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~---~~~~~~~~~~~~  253 (313)
                      .+               ....|+++|++++.++++++.+++++|  |+||+|+||+++|++....   .....+....+.
T Consensus       155 ~~---------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~  217 (255)
T PRK06841        155 LE---------------RHVAYCASKAGVVGMTKVLALEWGPYG--ITVNAISPTVVLTELGKKAWAGEKGERAKKLIPA  217 (255)
T ss_pred             CC---------------CCchHHHHHHHHHHHHHHHHHHHHhhC--eEEEEEEeCcCcCcccccccchhHHHHHHhcCCC
Confidence            66               677899999999999999999999999  9999999999999986532   111222334445


Q ss_pred             hhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          254 LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       254 ~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      .+..+|+|+|+.+++|++ +.+.++||+++..||+..
T Consensus       218 ~~~~~~~~va~~~~~l~~-~~~~~~~G~~i~~dgg~~  253 (255)
T PRK06841        218 GRFAYPEEIAAAALFLAS-DAAAMITGENLVIDGGYT  253 (255)
T ss_pred             CCCcCHHHHHHHHHHHcC-ccccCccCCEEEECCCcc
Confidence            567899999999999997 788999999999887654

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=7.4e-38  Score=277.37  Aligned_cols=239  Identities=24%  Similarity=0.283  Sum_probs=201.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      |.+++|++|||||++|||+++|+.|+++|++|++++|+.+..++..+++     +.++.++.+|++|+++++.+++++.+
T Consensus         2 ~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (257)
T PRK07067          2 MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI-----GPAAIAVSLDVTRQDSIDRIVAAAVE   76 (257)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999988777665544     34688999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCC-C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          105 QGRPLNILINNAGIMAS-P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~-~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      +++++|++|||+|.... + .+.+.+++++.+++|+.+++.+++++.+.|.+.    ..+++||++||..+..+.+    
T Consensus        77 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~~~~iv~~sS~~~~~~~~----  148 (257)
T PRK07067         77 RFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQ----GRGGKIINMASQAGRRGEA----  148 (257)
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhc----CCCcEEEEeCCHHhCCCCC----
Confidence            99999999999997643 2 266789999999999999999999999999763    2357999999988776655    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc-------------hhHhHHH
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG-------------ILRGFCN  249 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~-------------~~~~~~~  249 (313)
                                 +...|++||++++.++++++.++.++|  |+||+|+||+++|+++....             ....+..
T Consensus       149 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (257)
T PRK07067        149 -----------LVSHYCATKAAVISYTQSAALALIRHG--INVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGE  215 (257)
T ss_pred             -----------CCchhhhhHHHHHHHHHHHHHHhcccC--eEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhh
Confidence                       678999999999999999999999999  99999999999999754320             0011122


Q ss_pred             HHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          250 TVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       250 ~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      ..+..+..+|+|+|++++||++ +...+++|+.+.+|++..
T Consensus       216 ~~~~~~~~~~~dva~~~~~l~s-~~~~~~~g~~~~v~gg~~  255 (257)
T PRK07067        216 AVPLGRMGVPDDLTGMALFLAS-ADADYIVAQTYNVDGGNW  255 (257)
T ss_pred             cCCCCCccCHHHHHHHHHHHhC-cccccccCcEEeecCCEe
Confidence            3344567789999999999998 678899999999887643

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-37  Score=276.42  Aligned_cols=236  Identities=22%  Similarity=0.227  Sum_probs=193.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      .++++|++|||||++|||++++++|+++|++|++++|+.. .++..+++...  +.++.++.+|+++.+++.++++++.+
T Consensus         4 ~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (260)
T PRK12823          4 QRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAA--GGEALALTADLETYAGAQAAMAAAVE   80 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhc--CCeEEEEEEeCCCHHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999999853 44455555443  45688999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCC--CCC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          105 QGRPLNILINNAGIMA--SPF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~--~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      +++++|++|||||...  .+. +.+.+++++.+++|+.+++++++.++|.|.+     ...++||++||..+...     
T Consensus        81 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~g~iv~~sS~~~~~~-----  150 (260)
T PRK12823         81 AFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLA-----QGGGAIVNVSSIATRGI-----  150 (260)
T ss_pred             HcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHh-----cCCCeEEEEcCccccCC-----
Confidence            9999999999999642  233 6788999999999999999999999999987     34689999999876421     


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-----------chhH----h
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-----------GILR----G  246 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-----------~~~~----~  246 (313)
                                  ....|++||+|++.|+++++.+++++|  |+||+|+||+++|++....           ....    .
T Consensus       151 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (260)
T PRK12823        151 ------------NRVPYSAAKGGVNALTASLAFEYAEHG--IRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQ  216 (260)
T ss_pred             ------------CCCccHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCccCCcchhhHHhhccccccccccHHHHHHH
Confidence                        345799999999999999999999999  9999999999999863210           0011    1


Q ss_pred             HHHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcc
Q 021391          247 FCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNI  288 (313)
Q Consensus       247 ~~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~  288 (313)
                      .....+..+..+|+|+|++++||++ +.+.++||+.+..+++
T Consensus       217 ~~~~~~~~~~~~~~dva~~~~~l~s-~~~~~~~g~~~~v~gg  257 (260)
T PRK12823        217 TLDSSLMKRYGTIDEQVAAILFLAS-DEASYITGTVLPVGGG  257 (260)
T ss_pred             HhccCCcccCCCHHHHHHHHHHHcC-cccccccCcEEeecCC
Confidence            1222344567789999999999998 7788999999987754

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-37  Score=274.91  Aligned_cols=243  Identities=25%  Similarity=0.301  Sum_probs=208.0

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      ++++++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++...  +.++.++.+|+++++++.++++++
T Consensus         5 ~~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~   82 (256)
T PRK06124          5 QRFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAA--GGAAEALAFDIADEEAVAAAFARI   82 (256)
T ss_pred             cccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHH
Confidence            467789999999999999999999999999999999999988887777777554  456889999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          103 NSQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      ...++++|++|||+|.....  .+.+.+++++.+++|+.+++.+++.+++.|.+     ...++||++||..+..+.+  
T Consensus        83 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~~~iv~~ss~~~~~~~~--  155 (256)
T PRK06124         83 DAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKR-----QGYGRIIAITSIAGQVARA--  155 (256)
T ss_pred             HHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-----cCCcEEEEEeechhccCCC--
Confidence            99999999999999976542  26778899999999999999999999999987     3468999999998877666  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----chhHhHHHHHHHhhc
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----GILRGFCNTVGKLVL  256 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~~~~~  256 (313)
                                   +..+|+++|++++.++++++.|+.+.|  |+||+|+||+++|++....    .+...+....+..+.
T Consensus       156 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  220 (256)
T PRK06124        156 -------------GDAVYPAAKQGLTGLMRALAAEFGPHG--ITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRW  220 (256)
T ss_pred             -------------CccHhHHHHHHHHHHHHHHHHHHHHhC--cEEEEEEECCccCcchhhhccChHHHHHHHhcCCCCCC
Confidence                         678999999999999999999999888  9999999999999975432    111222223334456


Q ss_pred             CChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          257 KNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       257 ~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      .+|+|++++++||++ +.+.++||+++..||+..
T Consensus       221 ~~~~~~a~~~~~l~~-~~~~~~~G~~i~~dgg~~  253 (256)
T PRK06124        221 GRPEEIAGAAVFLAS-PAASYVNGHVLAVDGGYS  253 (256)
T ss_pred             CCHHHHHHHHHHHcC-cccCCcCCCEEEECCCcc
Confidence            789999999999998 778899999999887643

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-37  Score=274.69  Aligned_cols=239  Identities=19%  Similarity=0.166  Sum_probs=198.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      ||++|||||++|||+++++.|+++|++|++++|+.+..++..+++...  +.++.++++|++++++++++++++.+.+++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF--PGQVLTVQMDVRNPEDVQKMVEQIDEKFGR   78 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            689999999999999999999999999999999988777777666543  357889999999999999999999999999


Q ss_pred             eeEEEEcccCCCC-C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          109 LNILINNAGIMAS-P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       109 id~lv~~ag~~~~-~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                      +|++|||+|.... + .+.+.++|++++++|+.++++++++++|+|.+.    ...++||++||..+..+.+        
T Consensus        79 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~~g~ii~isS~~~~~~~~--------  146 (252)
T PRK07677         79 IDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEK----GIKGNIINMVATYAWDAGP--------  146 (252)
T ss_pred             ccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc----CCCEEEEEEcChhhccCCC--------
Confidence            9999999996432 2 277889999999999999999999999998762    2358999999998876544        


Q ss_pred             CCCCCCCccccchHhHHHHHHHHHHHHHHhcc-CCCcEEEEEeeCcccccCC-ccc----cchhHhHHHHHHHhhcCChH
Q 021391          187 NDESAYNSFGAYGQSKLANILHAKELAKHLKE-DGVNITANSLHPGSIVTNL-FRY----NGILRGFCNTVGKLVLKNIP  260 (313)
Q Consensus       187 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~-~g~~I~vn~i~PG~v~t~~-~~~----~~~~~~~~~~~~~~~~~~~~  260 (313)
                             ....|+++|+|++.++++|+.++.+ +|  |+||+|+||+++|+. ...    ....+.+.+..+..+..+|+
T Consensus       147 -------~~~~Y~~sKaa~~~~~~~la~e~~~~~g--i~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (252)
T PRK07677        147 -------GVIHSAAAKAGVLAMTRTLAVEWGRKYG--IRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPE  217 (252)
T ss_pred             -------CCcchHHHHHHHHHHHHHHHHHhCcccC--eEEEEEeecccccccccccccCCHHHHHHHhccCCCCCCCCHH
Confidence                   5678999999999999999999975 68  999999999999543 211    11122222333445678999


Q ss_pred             HHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          261 QGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       261 eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      |+|+.+.||++ +.+.++||+.+..+++...
T Consensus       218 ~va~~~~~l~~-~~~~~~~g~~~~~~gg~~~  247 (252)
T PRK07677        218 EIAGLAYFLLS-DEAAYINGTCITMDGGQWL  247 (252)
T ss_pred             HHHHHHHHHcC-ccccccCCCEEEECCCeec
Confidence            99999999998 7788999999998776544

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-38  Score=281.39  Aligned_cols=232  Identities=26%  Similarity=0.301  Sum_probs=196.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      -+++++|++|||||++|||++++++|+++|++|++++|+....+           ..++.++.+|++++++++++++++.
T Consensus         4 ~~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~~   72 (266)
T PRK06171          4 WLNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ-----------HENYQFVPTDVSSAEEVNHTVAEII   72 (266)
T ss_pred             cccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc-----------cCceEEEEccCCCHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999999865432           2367889999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCCC-----------CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391          104 SQGRPLNILINNAGIMASP-----------FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~-----------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                      +.++++|++|||||.....           .+.+.++|++++++|+.+++++++++.++|.+     +..++||++||..
T Consensus        73 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~g~iv~isS~~  147 (266)
T PRK06171         73 EKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVK-----QHDGVIVNMSSEA  147 (266)
T ss_pred             HHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHh-----cCCcEEEEEcccc
Confidence            9999999999999975321           14678899999999999999999999999987     4468999999999


Q ss_pred             ccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccc-cCCcccc----------
Q 021391          173 HRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIV-TNLFRYN----------  241 (313)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~-t~~~~~~----------  241 (313)
                      +..+.+               +...|+++|++++.++++++.+++++|  |+||+|+||+++ |++....          
T Consensus       148 ~~~~~~---------------~~~~Y~~sK~a~~~l~~~la~e~~~~g--i~v~~v~pG~~~~t~~~~~~~~~~~~~~~~  210 (266)
T PRK06171        148 GLEGSE---------------GQSCYAATKAALNSFTRSWAKELGKHN--IRVVGVAPGILEATGLRTPEYEEALAYTRG  210 (266)
T ss_pred             ccCCCC---------------CCchhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeccccccCCCcChhhhhhhccccC
Confidence            877655               678999999999999999999999999  999999999997 6653211          


Q ss_pred             ----chhHhHHH--HHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          242 ----GILRGFCN--TVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       242 ----~~~~~~~~--~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                          .....+..  ..+..+..+|+|+|+++.||++ +.+.++||+.+.+||+.
T Consensus       211 ~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s-~~~~~itG~~i~vdgg~  263 (266)
T PRK06171        211 ITVEQLRAGYTKTSTIPLGRSGKLSEVADLVCYLLS-DRASYITGVTTNIAGGK  263 (266)
T ss_pred             CCHHHHHhhhcccccccCCCCCCHHHhhhheeeeec-cccccceeeEEEecCcc
Confidence                00111222  3455677899999999999998 78899999999988764

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=9.9e-38  Score=303.31  Aligned_cols=238  Identities=23%  Similarity=0.276  Sum_probs=203.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      ...||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++     +.++..+.+|++|+++++++++++.++
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~  340 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL-----GDEHLSVQADITDEAAVESAFAQIQAR  340 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEccCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999987777665543     346778999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCC--CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          106 GRPLNILINNAGIMAS--PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      +|++|+||||||+...  +. +.+.++|++++++|+.+++++++.++|+|.+       +|+||++||.++..+.+    
T Consensus       341 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~----  409 (520)
T PRK06484        341 WGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQ-------GGVIVNLGSIASLLALP----  409 (520)
T ss_pred             cCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhcc-------CCEEEEECchhhcCCCC----
Confidence            9999999999998632  22 6788999999999999999999999999943       68999999999987766    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc-----hhHhHHHHHHHhhcC
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG-----ILRGFCNTVGKLVLK  257 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~-----~~~~~~~~~~~~~~~  257 (313)
                                 +..+|+++|+++++|+++++.|+.++|  ||||+|+||+++|++.....     ....+.+..+..+..
T Consensus       410 -----------~~~~Y~asKaal~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  476 (520)
T PRK06484        410 -----------PRNAYCASKAAVTMLSRSLACEWAPAG--IRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLG  476 (520)
T ss_pred             -----------CCchhHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCCCCc
Confidence                       678999999999999999999999999  99999999999999865321     112223334455678


Q ss_pred             ChHHHHHHHHHHHccCCccCCCceeecCCcccCCCc
Q 021391          258 NIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNS  293 (313)
Q Consensus       258 ~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~  293 (313)
                      +|+|+|+.++||++ +.+.++||+.+..+|+.....
T Consensus       477 ~~~dia~~~~~l~s-~~~~~~~G~~i~vdgg~~~~~  511 (520)
T PRK06484        477 DPEEVAEAIAFLAS-PAASYVNGATLTVDGGWTAFG  511 (520)
T ss_pred             CHHHHHHHHHHHhC-ccccCccCcEEEECCCccCCC
Confidence            99999999999998 778899999999887654433

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-37  Score=275.48  Aligned_cols=236  Identities=22%  Similarity=0.205  Sum_probs=198.2

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      +|+++||++|||||++|||++++++|+++|++|++++|+.+.     .   .  .+.++.++++|++++++++++++++.
T Consensus         1 ~~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~-----~---~--~~~~~~~~~~D~~~~~~~~~~~~~~~   70 (252)
T PRK07856          1 NLDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-----T---V--DGRPAEFHAADVRDPDQVAALVDAIV   70 (252)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh-----h---h--cCCceEEEEccCCCHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999998654     0   1  14568899999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          104 SQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      +.++++|+||||+|+....  .+.+.+.+++.+++|+.+++.+++.+.|.|.+.    ...++||++||..+..+.+   
T Consensus        71 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~~g~ii~isS~~~~~~~~---  143 (252)
T PRK07856         71 ERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQ----PGGGSIVNIGSVSGRRPSP---  143 (252)
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc----CCCcEEEEEcccccCCCCC---
Confidence            9999999999999976542  267788999999999999999999999999862    2358999999998887666   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----chhHhHHHHHHHhhcC
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----GILRGFCNTVGKLVLK  257 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~  257 (313)
                                  ....|+++|++++.++++++.++.++   |+||+|+||+++|++....    .....+....+..+..
T Consensus       144 ------------~~~~Y~~sK~a~~~l~~~la~e~~~~---i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (252)
T PRK07856        144 ------------GTAAYGAAKAGLLNLTRSLAVEWAPK---VRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLA  208 (252)
T ss_pred             ------------CCchhHHHHHHHHHHHHHHHHHhcCC---eEEEEEEeccccChHHhhhccCHHHHHHHhhcCCCCCCc
Confidence                        67899999999999999999999864   9999999999999975432    1111122233445678


Q ss_pred             ChHHHHHHHHHHHccCCccCCCceeecCCcccCCC
Q 021391          258 NIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPN  292 (313)
Q Consensus       258 ~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~  292 (313)
                      +|+|+|+.++||++ +.+.++||+.+.+||+...+
T Consensus       209 ~p~~va~~~~~L~~-~~~~~i~G~~i~vdgg~~~~  242 (252)
T PRK07856        209 TPADIAWACLFLAS-DLASYVSGANLEVHGGGERP  242 (252)
T ss_pred             CHHHHHHHHHHHcC-cccCCccCCEEEECCCcchH
Confidence            99999999999997 77889999999988776544

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=2.3e-37  Score=274.18  Aligned_cols=247  Identities=22%  Similarity=0.268  Sum_probs=205.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEec-CchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVR-NMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      +|++|||||++|||++++++|+++|++|+++++ +.+..+...+++...  +.+++++.+|++++++++++++++.+.++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH--GVRAEIRQLDLSDLPEGAQALDKLIQRLG   79 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            689999999999999999999999999998865 555666666666554  56789999999999999999999999999


Q ss_pred             CeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCC
Q 021391          108 PLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDK  185 (313)
Q Consensus       108 ~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  185 (313)
                      ++|++|||+|.....  .+.+.+++++++++|+.+++.+++++.++|.+.    +.+++||++||..+..+.+       
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~----~~~g~ii~isS~~~~~~~~-------  148 (256)
T PRK12743         80 RIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQ----GQGGRIINITSVHEHTPLP-------  148 (256)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc----CCCeEEEEEeeccccCCCC-------
Confidence            999999999986542  267889999999999999999999999999763    2358999999988776655       


Q ss_pred             CCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHHHHHHhhcCChHHHH
Q 021391          186 INDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCNTVGKLVLKNIPQGA  263 (313)
Q Consensus       186 ~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~eva  263 (313)
                              +...|+++|++++.++++++.++.++|  |+||+|+||+++|++.....  .........+..+..+|+|+|
T Consensus       149 --------~~~~Y~~sK~a~~~l~~~la~~~~~~~--i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  218 (256)
T PRK12743        149 --------GASAYTAAKHALGGLTKAMALELVEHG--ILVNAVAPGAIATPMNGMDDSDVKPDSRPGIPLGRPGDTHEIA  218 (256)
T ss_pred             --------CcchhHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEeCCccCccccccChHHHHHHHhcCCCCCCCCHHHHH
Confidence                    678999999999999999999999999  99999999999999865321  111122233445677999999


Q ss_pred             HHHHHHHccCCccCCCceeecCCcccCCCccCCCHH
Q 021391          264 ATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNME  299 (313)
Q Consensus       264 ~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~~~~~~~  299 (313)
                      +.++||++ +...++||+++..+|+......-.+.|
T Consensus       219 ~~~~~l~~-~~~~~~~G~~~~~dgg~~~~~~~~~~~  253 (256)
T PRK12743        219 SLVAWLCS-EGASYTTGQSLIVDGGFMLANPQFNSE  253 (256)
T ss_pred             HHHHHHhC-ccccCcCCcEEEECCCccccCCccccc
Confidence            99999997 788999999999888766554444443

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=2.6e-37  Score=270.49  Aligned_cols=231  Identities=18%  Similarity=0.139  Sum_probs=189.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      +|++|||||++|||++++++|+++|++|++++|+.+...   +.+...    .+.++.+|++++++++++++++.+.+++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~   74 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQA----GAQCIQADFSTNAGIMAFIDELKQHTDG   74 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHc----CCEEEEcCCCCHHHHHHHHHHHHhhCCC
Confidence            589999999999999999999999999999999875433   223221    3678999999999999999999999999


Q ss_pred             eeEEEEcccCCCC--CCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          109 LNILINNAGIMAS--PFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       109 id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                      +|++|||+|....  +.+.+.++|++++++|+.+++.+++.+.|.|.+..   .+.++||++||..+..+.+        
T Consensus        75 id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~---~~~g~iv~~ss~~~~~~~~--------  143 (236)
T PRK06483         75 LRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHG---HAASDIIHITDYVVEKGSD--------  143 (236)
T ss_pred             ccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCC---CCCceEEEEcchhhccCCC--------
Confidence            9999999997543  23567899999999999999999999999998731   1257999999988776655        


Q ss_pred             CCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHHHHHH
Q 021391          187 NDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGAATT  266 (313)
Q Consensus       187 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~eva~~~  266 (313)
                             .+.+|++||+++++|+++++.|+++ +  ||||+|+||++.|+...............+..+...|+|+|+.+
T Consensus       144 -------~~~~Y~asKaal~~l~~~~a~e~~~-~--irvn~v~Pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  213 (236)
T PRK06483        144 -------KHIAYAASKAALDNMTLSFAAKLAP-E--VKVNSIAPALILFNEGDDAAYRQKALAKSLLKIEPGEEEIIDLV  213 (236)
T ss_pred             -------CCccHHHHHHHHHHHHHHHHHHHCC-C--cEEEEEccCceecCCCCCHHHHHHHhccCccccCCCHHHHHHHH
Confidence                   6779999999999999999999986 5  99999999999886532222222233334555678999999999


Q ss_pred             HHHHccCCccCCCceeecCCcccC
Q 021391          267 CYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       267 ~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      .||++   ..++||+.+..||+..
T Consensus       214 ~~l~~---~~~~~G~~i~vdgg~~  234 (236)
T PRK06483        214 DYLLT---SCYVTGRSLPVDGGRH  234 (236)
T ss_pred             HHHhc---CCCcCCcEEEeCcccc
Confidence            99996   4789999999887653

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-37  Score=270.27  Aligned_cols=220  Identities=20%  Similarity=0.171  Sum_probs=186.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      |+++||+++||||++|||++++++|+++|++|++++|+.+++++..+++...  +.++..+.+|++++++++++++++.+
T Consensus         1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (227)
T PRK08862          1 MDIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSAL--TDNVYSFQLKDFSQESIRHLFDAIEQ   78 (227)
T ss_pred             CCCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999999999999988888877654  45678899999999999999999999


Q ss_pred             cCC-CeeEEEEcccCCCC--CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          105 QGR-PLNILINNAGIMAS--PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       105 ~~g-~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      ++| ++|++|||+|....  +. +.+.+++.+.+++|+.+++.+++.++|+|.+.    +++|+||++||..+.   +  
T Consensus        79 ~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~----~~~g~Iv~isS~~~~---~--  149 (227)
T PRK08862         79 QFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKR----NKKGVIVNVISHDDH---Q--  149 (227)
T ss_pred             HhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc----CCCceEEEEecCCCC---C--
Confidence            998 99999999985432  23 66778999999999999999999999999873    236899999996543   2  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChH
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIP  260 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  260 (313)
                                   ++..|+++|+|+++|+++++.|++++|  ||||+|+||+++|+.....   ..+ ..+       .+
T Consensus       150 -------------~~~~Y~asKaal~~~~~~la~el~~~~--Irvn~v~PG~i~t~~~~~~---~~~-~~~-------~~  203 (227)
T PRK08862        150 -------------DLTGVESSNALVSGFTHSWAKELTPFN--IRVGGVVPSIFSANGELDA---VHW-AEI-------QD  203 (227)
T ss_pred             -------------CcchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEecCcCcCCCccCH---HHH-HHH-------HH
Confidence                         456899999999999999999999999  9999999999999842211   111 111       18


Q ss_pred             HHHHHHHHHHccCCccCCCceeec
Q 021391          261 QGAATTCYVALHPQVQGVSGEYFS  284 (313)
Q Consensus       261 eva~~~~~l~~~~~~~~~tG~~~~  284 (313)
                      |++.++.||++   ..++||+.+.
T Consensus       204 ~~~~~~~~l~~---~~~~tg~~~~  224 (227)
T PRK08862        204 ELIRNTEYIVA---NEYFSGRVVE  224 (227)
T ss_pred             HHHhheeEEEe---cccccceEEe
Confidence            99999999996   5699998765

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-37  Score=273.59  Aligned_cols=241  Identities=24%  Similarity=0.278  Sum_probs=199.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+ ..+..+++...  +.++.++.+|++++++++++++++.++
T Consensus         3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~   79 (263)
T PRK08226          3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGR--GHRCTAVVADVRDPASVAAAIKRAKEK   79 (263)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999864 34444555433  457889999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCC--CCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccc-ccccCCCC
Q 021391          106 GRPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHR-FAYSEGIR  182 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~-~~~~~~~~  182 (313)
                      ++++|++|||+|....  ..+.+.+++++.+++|+.+++.+++.++|.+.+     ...++||++||..+. .+.+    
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~~~iv~isS~~~~~~~~~----  150 (263)
T PRK08226         80 EGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIA-----RKDGRIVMMSSVTGDMVADP----  150 (263)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh-----cCCcEEEEECcHHhcccCCC----
Confidence            9999999999997543  236678889999999999999999999999876     346799999998763 3333    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----------hhHhHHHHHH
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----------ILRGFCNTVG  252 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----------~~~~~~~~~~  252 (313)
                                 .+..|+++|++++.++++++.++.++|  |+||+|+||+++|++.....          .........+
T Consensus       151 -----------~~~~Y~~sK~a~~~~~~~la~~~~~~~--i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p  217 (263)
T PRK08226        151 -----------GETAYALTKAAIVGLTKSLAVEYAQSG--IRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIP  217 (263)
T ss_pred             -----------CcchHHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCC
Confidence                       567899999999999999999999988  99999999999999764320          1112222234


Q ss_pred             HhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCC
Q 021391          253 KLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPN  292 (313)
Q Consensus       253 ~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~  292 (313)
                      ..+..+|+|+|+.++||++ +.+.++||+++..||+...+
T Consensus       218 ~~~~~~~~~va~~~~~l~~-~~~~~~~g~~i~~dgg~~~~  256 (263)
T PRK08226        218 LRRLADPLEVGELAAFLAS-DESSYLTGTQNVIDGGSTLP  256 (263)
T ss_pred             CCCCCCHHHHHHHHHHHcC-chhcCCcCceEeECCCcccC
Confidence            4456799999999999997 77889999999988776544

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5e-37  Score=270.97  Aligned_cols=238  Identities=19%  Similarity=0.229  Sum_probs=193.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecC-chhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRN-MAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      |.+++|++|||||++|||+++|+.|+++|++|++++++ .+..+....++     +.++.++.+|+++++++..+++++.
T Consensus         1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~   75 (253)
T PRK08642          1 MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL-----GDRAIALQADVTDREQVQAMFATAT   75 (253)
T ss_pred             CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            45788999999999999999999999999999987654 44444333322     3478899999999999999999998


Q ss_pred             hcCCC-eeEEEEcccCCC-------CCC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccc
Q 021391          104 SQGRP-LNILINNAGIMA-------SPF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHR  174 (313)
Q Consensus       104 ~~~g~-id~lv~~ag~~~-------~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~  174 (313)
                      +.+++ +|++|||+|...       .+. +.+.+++++.+++|+.+++.+++.+.|.|.+     ...++||++||..+.
T Consensus        76 ~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~g~iv~iss~~~~  150 (253)
T PRK08642         76 EHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMRE-----QGFGRIINIGTNLFQ  150 (253)
T ss_pred             HHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHh-----cCCeEEEEECCcccc
Confidence            88887 999999998642       112 5677889999999999999999999999977     346899999997665


Q ss_pred             ccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc---hhHhHHHHH
Q 021391          175 FAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG---ILRGFCNTV  251 (313)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~---~~~~~~~~~  251 (313)
                      .+.+               ++..|+++|++++.++++++.++.++|  ||||+|+||+++|+......   ....+....
T Consensus       151 ~~~~---------------~~~~Y~~sK~a~~~l~~~la~~~~~~~--i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~  213 (253)
T PRK08642        151 NPVV---------------PYHDYTTAKAALLGLTRNLAAELGPYG--ITVNMVSGGLLRTTDASAATPDEVFDLIAATT  213 (253)
T ss_pred             CCCC---------------CccchHHHHHHHHHHHHHHHHHhCccC--eEEEEEeecccCCchhhccCCHHHHHHHHhcC
Confidence            4433               567899999999999999999999999  99999999999998544221   111222334


Q ss_pred             HHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          252 GKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       252 ~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      +..+..+|+|+|+.++||++ +.+.++||+.+..||+..
T Consensus       214 ~~~~~~~~~~va~~~~~l~~-~~~~~~~G~~~~vdgg~~  251 (253)
T PRK08642        214 PLRKVTTPQEFADAVLFFAS-PWARAVTGQNLVVDGGLV  251 (253)
T ss_pred             CcCCCCCHHHHHHHHHHHcC-chhcCccCCEEEeCCCee
Confidence            45567899999999999998 778899999999887643

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=5.1e-37  Score=272.08  Aligned_cols=233  Identities=23%  Similarity=0.267  Sum_probs=194.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHH----cCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           31 TAIVTGASSGIGTETARVLAL----RGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~----~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      ++|||||++|||+++|++|++    +|++|++++|+.+.+++..+++....++.++.++.+|++++++++++++++.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    7999999999999888888888764445678999999999999999999998877


Q ss_pred             CC----eeEEEEcccCCCCC---C-c-cCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccc
Q 021391          107 RP----LNILINNAGIMASP---F-M-LSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAY  177 (313)
Q Consensus       107 g~----id~lv~~ag~~~~~---~-~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~  177 (313)
                      +.    .|+||||||.....   . + .+.+++++.+++|+.+++.+++.++|.|.++.   ...++||++||.++..+.
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~---~~~~~iv~isS~~~~~~~  158 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSP---GLNRTVVNISSLCAIQPF  158 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcC---CCCCEEEEECCHHhCCCC
Confidence            64    37999999975321   1 2 24578999999999999999999999998631   124799999999988776


Q ss_pred             cCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-------chhHhHHHH
Q 021391          178 SEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-------GILRGFCNT  250 (313)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-------~~~~~~~~~  250 (313)
                      +               ++.+|++||+|++.|+++++.|+.++|  |+||+|+||+++|++.+..       .....+...
T Consensus       159 ~---------------~~~~Y~asKaal~~l~~~la~e~~~~~--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  221 (256)
T TIGR01500       159 K---------------GWALYCAGKAARDMLFQVLALEEKNPN--VRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQEL  221 (256)
T ss_pred             C---------------CchHHHHHHHHHHHHHHHHHHHhcCCC--eEEEEecCCcccchHHHHHHHhcCChhHHHHHHHH
Confidence            6               678899999999999999999999998  9999999999999986532       111223344


Q ss_pred             HHHhhcCChHHHHHHHHHHHccCCccCCCceeecC
Q 021391          251 VGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSD  285 (313)
Q Consensus       251 ~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~  285 (313)
                      .+..+..+|+|+|+.++++++  ..+++||++++.
T Consensus       222 ~~~~~~~~p~eva~~~~~l~~--~~~~~~G~~~~~  254 (256)
T TIGR01500       222 KAKGKLVDPKVSAQKLLSLLE--KDKFKSGAHVDY  254 (256)
T ss_pred             HhcCCCCCHHHHHHHHHHHHh--cCCcCCcceeec
Confidence            456678899999999999995  468999998763

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-37  Score=273.78  Aligned_cols=236  Identities=22%  Similarity=0.261  Sum_probs=195.7

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      +..+++||++|||||++|||++++++|+++|++|++++|+.+..      .     ..++.++++|++|+++++++++++
T Consensus         3 ~~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~------~-----~~~~~~~~~D~~~~~~~~~~~~~~   71 (260)
T PRK06523          3 FFLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD------L-----PEGVEFVAADLTTAEGCAAVARAV   71 (260)
T ss_pred             cCcCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh------c-----CCceeEEecCCCCHHHHHHHHHHH
Confidence            34568999999999999999999999999999999999986431      0     346789999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCC---CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccccc
Q 021391          103 NSQGRPLNILINNAGIMAS---PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYS  178 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~---~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~  178 (313)
                      .+.++++|++|||||....   +. +.+.+++++.+++|+.+++.++++++|.|.+     +..++||++||..+..+.+
T Consensus        72 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~g~ii~isS~~~~~~~~  146 (260)
T PRK06523         72 LERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIA-----RGSGVIIHVTSIQRRLPLP  146 (260)
T ss_pred             HHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHh-----cCCcEEEEEecccccCCCC
Confidence            9999999999999996532   12 5678899999999999999999999999987     3468999999988765533


Q ss_pred             CCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--h-------hHhHH-
Q 021391          179 EGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--I-------LRGFC-  248 (313)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~-------~~~~~-  248 (313)
                      .              ....|+++|++++.++++++.++.++|  |+||+|+||+++|++.....  +       ..... 
T Consensus       147 ~--------------~~~~Y~~sK~a~~~l~~~~a~~~~~~g--i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  210 (260)
T PRK06523        147 E--------------STTAYAAAKAALSTYSKSLSKEVAPKG--VRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQ  210 (260)
T ss_pred             C--------------CcchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHH
Confidence            1              467899999999999999999999999  99999999999999854210  0       01111 


Q ss_pred             ------HHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          249 ------NTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       249 ------~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                            ...+..+..+|+|+|+.++||++ +.+.++||+.+..+|+..+
T Consensus       211 ~~~~~~~~~p~~~~~~~~~va~~~~~l~s-~~~~~~~G~~~~vdgg~~~  258 (260)
T PRK06523        211 IIMDSLGGIPLGRPAEPEEVAELIAFLAS-DRAASITGTEYVIDGGTVP  258 (260)
T ss_pred             HHHHHhccCccCCCCCHHHHHHHHHHHhC-cccccccCceEEecCCccC
Confidence                  11244556789999999999998 7788999999998876544

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=3.9e-38  Score=262.15  Aligned_cols=232  Identities=24%  Similarity=0.261  Sum_probs=202.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      |+++||.+++||+.||||++++++|+++|..+.++..+.+..+ ...++.+.+|...+.|++||+++..+++++++++.+
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~-a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~   79 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPE-AIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILA   79 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHH-HHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHH
Confidence            6789999999999999999999999999999888888777744 456788888888999999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCC
Q 021391          105 QGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFD  184 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  184 (313)
                      .+|.||++||+||+.      ++.+|++++++|+.|.++-+..++|+|.|.  +..++|-||++||++|..|.|      
T Consensus        80 ~fg~iDIlINgAGi~------~dkd~e~Ti~vNLtgvin~T~~alpyMdk~--~gG~GGiIvNmsSv~GL~P~p------  145 (261)
T KOG4169|consen   80 TFGTIDILINGAGIL------DDKDWERTINVNLTGVINGTQLALPYMDKK--QGGKGGIIVNMSSVAGLDPMP------  145 (261)
T ss_pred             HhCceEEEEcccccc------cchhHHHhhccchhhhhhhhhhhhhhhhhh--cCCCCcEEEEeccccccCccc------
Confidence            999999999999986      467899999999999999999999999983  335789999999999999988      


Q ss_pred             CCCCCCCCCccccchHhHHHHHHHHHHHHHHh--ccCCCcEEEEEeeCcccccCCcccc-------chhHhHHHHHHHhh
Q 021391          185 KINDESAYNSFGAYGQSKLANILHAKELAKHL--KEDGVNITANSLHPGSIVTNLFRYN-------GILRGFCNTVGKLV  255 (313)
Q Consensus       185 ~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~--~~~g~~I~vn~i~PG~v~t~~~~~~-------~~~~~~~~~~~~~~  255 (313)
                               ..+.|++||+++.+|+|++|...  .+.|  |++|++|||+++|.+..+.       +..+.+...+....
T Consensus       146 ---------~~pVY~AsKaGVvgFTRSla~~ayy~~sG--V~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~  214 (261)
T KOG4169|consen  146 ---------VFPVYAASKAGVVGFTRSLADLAYYQRSG--VRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAP  214 (261)
T ss_pred             ---------cchhhhhcccceeeeehhhhhhhhHhhcC--EEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcc
Confidence                     78999999999999999998775  4557  9999999999999886653       23344445555555


Q ss_pred             cCChHHHHHHHHHHHccCCccCCCceeecCC
Q 021391          256 LKNIPQGAATTCYVALHPQVQGVSGEYFSDS  286 (313)
Q Consensus       256 ~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~  286 (313)
                      ..+|++++..++-++..    ..+|+.|..+
T Consensus       215 ~q~~~~~a~~~v~aiE~----~~NGaiw~v~  241 (261)
T KOG4169|consen  215 KQSPACCAINIVNAIEY----PKNGAIWKVD  241 (261)
T ss_pred             cCCHHHHHHHHHHHHhh----ccCCcEEEEe
Confidence            68899999999999972    5789988765

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.6e-37  Score=270.69  Aligned_cols=239  Identities=21%  Similarity=0.238  Sum_probs=201.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      +.+++|+++||||++|||+++|++|+++|++|++++|+.+..++..+++...  +.++.++.+|++++++++++++++.+
T Consensus         1 ~~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (258)
T PRK07890          1 MLLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDL--GRRALAVPTDITDEDQCANLVALALE   78 (258)
T ss_pred             CccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHh--CCceEEEecCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999988887777776554  45789999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCC--CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          105 QGRPLNILINNAGIMAS--PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      +++++|++|||+|....  +. +.+.+++++.+++|+.+++.+++++.+.|.+.      +++||++||..+..+.+   
T Consensus        79 ~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~~ii~~sS~~~~~~~~---  149 (258)
T PRK07890         79 RFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES------GGSIVMINSMVLRHSQP---  149 (258)
T ss_pred             HcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC------CCEEEEEechhhccCCC---
Confidence            99999999999997543  22 66789999999999999999999999999762      47999999998876655   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-------------chhHhHH
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-------------GILRGFC  248 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-------------~~~~~~~  248 (313)
                                  ++..|+++|++++.++++++.+++++|  |++|+|+||++.|++....             .......
T Consensus       150 ------------~~~~Y~~sK~a~~~l~~~~a~~~~~~~--i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (258)
T PRK07890        150 ------------KYGAYKMAKGALLAASQSLATELGPQG--IRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETA  215 (258)
T ss_pred             ------------CcchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHh
Confidence                        678999999999999999999999998  9999999999999875321             0111112


Q ss_pred             HHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          249 NTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       249 ~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      +..+.....+|+|++++++|+++ +...++||+.+..+++.
T Consensus       216 ~~~~~~~~~~~~dva~a~~~l~~-~~~~~~~G~~i~~~gg~  255 (258)
T PRK07890        216 ANSDLKRLPTDDEVASAVLFLAS-DLARAITGQTLDVNCGE  255 (258)
T ss_pred             hcCCccccCCHHHHHHHHHHHcC-HhhhCccCcEEEeCCcc
Confidence            22334456789999999999998 66779999998776654

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-36  Score=270.03  Aligned_cols=244  Identities=20%  Similarity=0.278  Sum_probs=202.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      +++++||++|||||++|||++++++|+++|++|++++|+.+.. +..+++...  +.++.++.+|++++++++++++++.
T Consensus         2 ~~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   78 (258)
T PRK08628          2 DLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRAL--QPRAEFVQVDLTDDAQCRDAVEQTV   78 (258)
T ss_pred             CCCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999988766 556666554  4578999999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCCC-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          104 SQGRPLNILINNAGIMASP-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      +.++++|++|||+|..... .+.+.++++..+++|+.+++.+++.+.|.+.+     + .++||++||..+..+.+    
T Consensus        79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~-~~~iv~~ss~~~~~~~~----  148 (258)
T PRK08628         79 AKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKA-----S-RGAIVNISSKTALTGQG----  148 (258)
T ss_pred             HhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhc-----c-CcEEEEECCHHhccCCC----
Confidence            9999999999999975432 34444889999999999999999999999875     2 57999999998887655    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-----chh---HhHHHHHHH-
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-----GIL---RGFCNTVGK-  253 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-----~~~---~~~~~~~~~-  253 (313)
                                 ....|++||++++.++++++.++.++|  |+||+|+||.++|++....     ...   .......+. 
T Consensus       149 -----------~~~~Y~~sK~a~~~~~~~l~~e~~~~~--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (258)
T PRK08628        149 -----------GTSGYAAAKGAQLALTREWAVALAKDG--VRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLG  215 (258)
T ss_pred             -----------CCchhHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCcc
Confidence                       678999999999999999999999988  9999999999999975431     000   111111222 


Q ss_pred             hhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCCcc
Q 021391          254 LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQ  294 (313)
Q Consensus       254 ~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~~  294 (313)
                      .+..+|+|+|+.++|+++ +...+++|+.+..+|+....+.
T Consensus       216 ~~~~~~~dva~~~~~l~~-~~~~~~~g~~~~~~gg~~~~~~  255 (258)
T PRK08628        216 HRMTTAEEIADTAVFLLS-ERSSHTTGQWLFVDGGYVHLDR  255 (258)
T ss_pred             ccCCCHHHHHHHHHHHhC-hhhccccCceEEecCCcccccc
Confidence            256789999999999998 6778999998887766554443

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.4e-36  Score=274.67  Aligned_cols=244  Identities=27%  Similarity=0.297  Sum_probs=198.4

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc-hhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM-AAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFAS  100 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~  100 (313)
                      .+.++++||++|||||++|||+++|++|+++|++|++++++. +..++..+++...  +.++.++.+|++|.++++++++
T Consensus         5 ~~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~--g~~~~~~~~Dv~d~~~~~~~~~   82 (306)
T PRK07792          5 TNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAA--GAKAVAVAGDISQRATADELVA   82 (306)
T ss_pred             cCCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHH
Confidence            355779999999999999999999999999999999999854 4566677777654  5678999999999999999999


Q ss_pred             HHhhcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhcc--CCCCCeEEEECCcccccc
Q 021391          101 EYNSQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQK--SSREGRIVNVSSEAHRFA  176 (313)
Q Consensus       101 ~~~~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~--~~~~g~iv~isS~~~~~~  176 (313)
                      ++.+ +|++|+||||||+....  .+.+.++|++.+++|+.+++++++++.++|.+....  ....|+||++||.++..+
T Consensus        83 ~~~~-~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  161 (306)
T PRK07792         83 TAVG-LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVG  161 (306)
T ss_pred             HHHH-hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccC
Confidence            9988 99999999999987553  267888999999999999999999999999763211  012479999999988776


Q ss_pred             ccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-chhHhHHHHHHHhh
Q 021391          177 YSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-GILRGFCNTVGKLV  255 (313)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-~~~~~~~~~~~~~~  255 (313)
                      .+               +...|+++|+++++++++++.++.++|  |+||+|+||. .|++.... ......  ......
T Consensus       162 ~~---------------~~~~Y~asKaal~~l~~~la~e~~~~g--I~vn~i~Pg~-~t~~~~~~~~~~~~~--~~~~~~  221 (306)
T PRK07792        162 PV---------------GQANYGAAKAGITALTLSAARALGRYG--VRANAICPRA-RTAMTADVFGDAPDV--EAGGID  221 (306)
T ss_pred             CC---------------CCchHHHHHHHHHHHHHHHHHHhhhcC--eEEEEECCCC-CCchhhhhccccchh--hhhccC
Confidence            55               677899999999999999999999999  9999999994 78765422 000000  011122


Q ss_pred             cCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          256 LKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       256 ~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      ..+|+++|..+.||++ +...++||+++.++|+.
T Consensus       222 ~~~pe~va~~v~~L~s-~~~~~~tG~~~~v~gg~  254 (306)
T PRK07792        222 PLSPEHVVPLVQFLAS-PAAAEVNGQVFIVYGPM  254 (306)
T ss_pred             CCCHHHHHHHHHHHcC-ccccCCCCCEEEEcCCe
Confidence            3579999999999997 77789999998876543

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.8e-37  Score=279.47  Aligned_cols=232  Identities=25%  Similarity=0.252  Sum_probs=194.7

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|.++++++++++.
T Consensus         2 ~~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~~~~~   79 (330)
T PRK06139          2 MGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL--GAEVLVVPTDVTDADQVKALATQAA   79 (330)
T ss_pred             CcCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHH
Confidence            35678999999999999999999999999999999999999988888877654  5578889999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          104 SQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      +.+|++|++|||||+....  .+.+.+++++.+++|+.+++++++.++|+|.+     +..|+||+++|..+..+.|   
T Consensus        80 ~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~-----~~~g~iV~isS~~~~~~~p---  151 (330)
T PRK06139         80 SFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKK-----QGHGIFINMISLGGFAAQP---  151 (330)
T ss_pred             HhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHH-----cCCCEEEEEcChhhcCCCC---
Confidence            9899999999999976542  27788999999999999999999999999998     4468999999999887766   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccC-CCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChH
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKED-GVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIP  260 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~-g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  260 (313)
                                  .+..|++||+++.+|+++|+.|+.+. |  |+|++|+||+++|++......... ....+.....+|+
T Consensus       152 ------------~~~~Y~asKaal~~~~~sL~~El~~~~g--I~V~~v~Pg~v~T~~~~~~~~~~~-~~~~~~~~~~~pe  216 (330)
T PRK06139        152 ------------YAAAYSASKFGLRGFSEALRGELADHPD--IHVCDVYPAFMDTPGFRHGANYTG-RRLTPPPPVYDPR  216 (330)
T ss_pred             ------------CchhHHHHHHHHHHHHHHHHHHhCCCCC--eEEEEEecCCccCccccccccccc-ccccCCCCCCCHH
Confidence                        67899999999999999999999874 7  999999999999998653211100 0001122356899


Q ss_pred             HHHHHHHHHHccCCccCCCc
Q 021391          261 QGAATTCYVALHPQVQGVSG  280 (313)
Q Consensus       261 eva~~~~~l~~~~~~~~~tG  280 (313)
                      ++|+.+++++.++......|
T Consensus       217 ~vA~~il~~~~~~~~~~~~g  236 (330)
T PRK06139        217 RVAKAVVRLADRPRATTTVG  236 (330)
T ss_pred             HHHHHHHHHHhCCCCEEEcC
Confidence            99999999997665443333

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=1.3e-36  Score=269.07  Aligned_cols=238  Identities=25%  Similarity=0.222  Sum_probs=198.0

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      .++++++||++|||||++|||+++|++|+++|++|++++|+.++.++..+++     +.++.++.+|+++.+++.+++++
T Consensus         3 ~~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~   77 (255)
T PRK05717          3 EPNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL-----GENAWFIAMDVADEAQVAAGVAE   77 (255)
T ss_pred             CCCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc-----CCceEEEEccCCCHHHHHHHHHH
Confidence            4677899999999999999999999999999999999999877665544332     34688999999999999999999


Q ss_pred             HhhcCCCeeEEEEcccCCCC---CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccc
Q 021391          102 YNSQGRPLNILINNAGIMAS---PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAY  177 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~~~---~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~  177 (313)
                      +.+++|++|++|||+|....   +. +.+.+++++.+++|+.+++++++++.|+|.+.      .++||++||..+..+.
T Consensus        78 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~g~ii~~sS~~~~~~~  151 (255)
T PRK05717         78 VLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH------NGAIVNLASTRARQSE  151 (255)
T ss_pred             HHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc------CcEEEEEcchhhcCCC
Confidence            99999999999999998643   22 56788999999999999999999999999762      5799999999887765


Q ss_pred             cCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc---hhHhHHHHHHHh
Q 021391          178 SEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG---ILRGFCNTVGKL  254 (313)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~---~~~~~~~~~~~~  254 (313)
                      +               ....|+++|++++.++++++.++.. +  |+||+|+||+++|++.....   .........+..
T Consensus       152 ~---------------~~~~Y~~sKaa~~~~~~~la~~~~~-~--i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~  213 (255)
T PRK05717        152 P---------------DTEAYAASKGGLLALTHALAISLGP-E--IRVNAVSPGWIDARDPSQRRAEPLSEADHAQHPAG  213 (255)
T ss_pred             C---------------CCcchHHHHHHHHHHHHHHHHHhcC-C--CEEEEEecccCcCCccccccchHHHHHHhhcCCCC
Confidence            5               5678999999999999999999875 4  99999999999998754321   111111123445


Q ss_pred             hcCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          255 VLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       255 ~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      +..+|+|+|..++++++ +...+++|+.+..+++.
T Consensus       214 ~~~~~~~va~~~~~l~~-~~~~~~~g~~~~~~gg~  247 (255)
T PRK05717        214 RVGTVEDVAAMVAWLLS-RQAGFVTGQEFVVDGGM  247 (255)
T ss_pred             CCcCHHHHHHHHHHHcC-chhcCccCcEEEECCCc
Confidence            67799999999999997 66789999988877653

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-36  Score=271.88  Aligned_cols=237  Identities=22%  Similarity=0.227  Sum_probs=194.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchh-------HHHHHHHHHHhCCCCceEEEEccCCCHHHHHH
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAA-------GKDVREAIVKEIPSAKVDAMELDVSSLASVRK   97 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~   97 (313)
                      |+++||++|||||++|||+++|++|+++|++|++++|+.+.       +++..+++...  +.++.++.+|+++++++..
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~   79 (273)
T PRK08278          2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA--GGQALPLVGDVRDEDQVAA   79 (273)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHH
Confidence            56789999999999999999999999999999999997653       33444445433  4578899999999999999


Q ss_pred             HHHHHhhcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccc
Q 021391           98 FASEYNSQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRF  175 (313)
Q Consensus        98 ~~~~~~~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~  175 (313)
                      +++++.+.++++|++|||+|.....  .+.+.+++++++++|+.+++.+++++.|+|.+     +.+++||++||..+..
T Consensus        80 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~-----~~~g~iv~iss~~~~~  154 (273)
T PRK08278         80 AVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKK-----SENPHILTLSPPLNLD  154 (273)
T ss_pred             HHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHh-----cCCCEEEEECCchhcc
Confidence            9999999999999999999976432  26778899999999999999999999999987     3468999999987665


Q ss_pred             cccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCc-ccccCCccccchhHhHHHHHHHh
Q 021391          176 AYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPG-SIVTNLFRYNGILRGFCNTVGKL  254 (313)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG-~v~t~~~~~~~~~~~~~~~~~~~  254 (313)
                      +..             ++++..|++||++++.++++++.|+.++|  |+||+|+|| +++|++.+.....     ..+..
T Consensus       155 ~~~-------------~~~~~~Y~~sK~a~~~~~~~la~el~~~~--I~v~~i~Pg~~i~t~~~~~~~~~-----~~~~~  214 (273)
T PRK08278        155 PKW-------------FAPHTAYTMAKYGMSLCTLGLAEEFRDDG--IAVNALWPRTTIATAAVRNLLGG-----DEAMR  214 (273)
T ss_pred             ccc-------------cCCcchhHHHHHHHHHHHHHHHHHhhhcC--cEEEEEeCCCccccHHHHhcccc-----ccccc
Confidence            430             12678999999999999999999999999  999999999 6888765432101     11223


Q ss_pred             hcCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          255 VLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       255 ~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      ...+|+++|+.++++++ +...++||+++.+.+..
T Consensus       215 ~~~~p~~va~~~~~l~~-~~~~~~~G~~~~~~~~~  248 (273)
T PRK08278        215 RSRTPEIMADAAYEILS-RPAREFTGNFLIDEEVL  248 (273)
T ss_pred             ccCCHHHHHHHHHHHhc-CccccceeEEEeccchh
Confidence            46799999999999998 66789999988644433

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-36  Score=272.48  Aligned_cols=241  Identities=22%  Similarity=0.253  Sum_probs=201.0

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchh-HHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAA-GKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      ...+++||++|||||++|||++++++|+++|++|++++|+.+. .+...+.+...  +.++.++.+|+++.+++++++++
T Consensus        40 ~~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~  117 (290)
T PRK06701         40 GSGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKE--GVKCLLIPGDVSDEAFCKDAVEE  117 (290)
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHH
Confidence            3567899999999999999999999999999999999998643 44444444332  45788999999999999999999


Q ss_pred             HhhcCCCeeEEEEcccCCCC--C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccccc
Q 021391          102 YNSQGRPLNILINNAGIMAS--P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYS  178 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~~~--~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~  178 (313)
                      +.+.++++|++|||||....  + .+.+.+++.+++++|+.+++.+++++.+.|.+       .++||++||..+..+.+
T Consensus       118 i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~-------~g~iV~isS~~~~~~~~  190 (290)
T PRK06701        118 TVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ-------GSAIINTGSITGYEGNE  190 (290)
T ss_pred             HHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh-------CCeEEEEecccccCCCC
Confidence            99999999999999997543  2 26788899999999999999999999999965       47999999998877665


Q ss_pred             CCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc---hhHhHHHHHHHhh
Q 021391          179 EGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG---ILRGFCNTVGKLV  255 (313)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~---~~~~~~~~~~~~~  255 (313)
                                     ....|+++|+|++.++++++.++.+.|  |+||+|+||+++|++.....   ....+....+...
T Consensus       191 ---------------~~~~Y~~sK~a~~~l~~~la~~~~~~g--Irv~~i~pG~v~T~~~~~~~~~~~~~~~~~~~~~~~  253 (290)
T PRK06701        191 ---------------TLIDYSATKGAIHAFTRSLAQSLVQKG--IRVNAVAPGPIWTPLIPSDFDEEKVSQFGSNTPMQR  253 (290)
T ss_pred             ---------------CcchhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCCCCCcccccccCHHHHHHHHhcCCcCC
Confidence                           567899999999999999999999999  99999999999999765421   1112222334455


Q ss_pred             cCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          256 LKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       256 ~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      ..+++|+|++++||++ +.+.+++|+++..+++..
T Consensus       254 ~~~~~dva~~~~~ll~-~~~~~~~G~~i~idgg~~  287 (290)
T PRK06701        254 PGQPEELAPAYVFLAS-PDSSYITGQMLHVNGGVI  287 (290)
T ss_pred             CcCHHHHHHHHHHHcC-cccCCccCcEEEeCCCcc
Confidence            6789999999999998 678899999999887643

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.7e-38  Score=252.44  Aligned_cols=235  Identities=24%  Similarity=0.312  Sum_probs=203.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      ..+++|+++++||++-|||++++++|++.|++|+.+.|+++.+..+.++    .| .-++.++.|+++++.+.+++-   
T Consensus         2 ~t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e----~p-~~I~Pi~~Dls~wea~~~~l~---   73 (245)
T KOG1207|consen    2 KTSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKE----TP-SLIIPIVGDLSAWEALFKLLV---   73 (245)
T ss_pred             cccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhh----CC-cceeeeEecccHHHHHHHhhc---
Confidence            3568999999999999999999999999999999999998887766554    32 348889999999877655544   


Q ss_pred             hcCCCeeEEEEcccCCCC-CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          104 SQGRPLNILINNAGIMAS-PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~-~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                       ..+++|.+|||||+... ++ +.+.++++++|++|+.+++.+.|....-+...    ..+|.||++||.++.++..   
T Consensus        74 -~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R----~~~GaIVNvSSqas~R~~~---  145 (245)
T KOG1207|consen   74 -PVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDR----QIKGAIVNVSSQASIRPLD---  145 (245)
T ss_pred             -ccCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhc----cCCceEEEecchhcccccC---
Confidence             34689999999998754 44 89999999999999999999999977776653    3468899999999998876   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----chhHhHHHHHHHhhcC
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----GILRGFCNTVGKLVLK  257 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~  257 (313)
                                  ....|+++|+|+.+++|+||.|+++++  ||||+++|-.+.|.|.+..    .....+...+|..++.
T Consensus       146 ------------nHtvYcatKaALDmlTk~lAlELGp~k--IRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~rFa  211 (245)
T KOG1207|consen  146 ------------NHTVYCATKAALDMLTKCLALELGPQK--IRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLKRFA  211 (245)
T ss_pred             ------------CceEEeecHHHHHHHHHHHHHhhCcce--eEeeccCCeEEEecccccccCCchhccchhhhCchhhhh
Confidence                        788999999999999999999999999  9999999999999997753    2344567788889999


Q ss_pred             ChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          258 NIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       258 ~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      ..+|+.++++||++ +.++..||..+.++|++
T Consensus       212 EV~eVVnA~lfLLS-d~ssmttGstlpveGGf  242 (245)
T KOG1207|consen  212 EVDEVVNAVLFLLS-DNSSMTTGSTLPVEGGF  242 (245)
T ss_pred             HHHHHHhhheeeee-cCcCcccCceeeecCCc
Confidence            99999999999998 88999999999987765

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-36  Score=267.67  Aligned_cols=245  Identities=25%  Similarity=0.369  Sum_probs=206.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      .++++|+++||||++|||++++++|+++|++|++++|+.++++++..++...  +.++.++.+|+++.+++.++++++.+
T Consensus         5 ~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (258)
T PRK06949          5 INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAE--GGAAHVVSLDVTDYQSIKAAVAHAET   82 (258)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            4588999999999999999999999999999999999998888777766544  34688999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhc---cCCCCCeEEEECCccccccccC
Q 021391          105 QGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQ---KSSREGRIVNVSSEAHRFAYSE  179 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~---~~~~~g~iv~isS~~~~~~~~~  179 (313)
                      .++++|++|||+|.....  .+.+.++++.++++|+.+++.+++++.|.|.++..   .....++||++||..+..+.+ 
T Consensus        83 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-  161 (258)
T PRK06949         83 EAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLP-  161 (258)
T ss_pred             hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCC-
Confidence            999999999999975432  25677889999999999999999999999987421   011247999999988776554 


Q ss_pred             CCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc---hhHhHHHHHHHhhc
Q 021391          180 GIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG---ILRGFCNTVGKLVL  256 (313)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~---~~~~~~~~~~~~~~  256 (313)
                                    ...+|+++|++++.++++++.++.+.|  |+||+|+||+++|++.....   ......+.++..+.
T Consensus       162 --------------~~~~Y~~sK~a~~~~~~~la~~~~~~~--i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  225 (258)
T PRK06949        162 --------------QIGLYCMSKAAVVHMTRAMALEWGRHG--INVNAICPGYIDTEINHHHWETEQGQKLVSMLPRKRV  225 (258)
T ss_pred             --------------CccHHHHHHHHHHHHHHHHHHHHHhcC--eEEEEEeeCCCcCCcchhccChHHHHHHHhcCCCCCC
Confidence                          567899999999999999999999988  99999999999999865321   11223334455678


Q ss_pred             CChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          257 KNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       257 ~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      ..|+|+++.++||++ +.+.++||+++..||+.
T Consensus       226 ~~p~~~~~~~~~l~~-~~~~~~~G~~i~~dgg~  257 (258)
T PRK06949        226 GKPEDLDGLLLLLAA-DESQFINGAIISADDGF  257 (258)
T ss_pred             cCHHHHHHHHHHHhC-hhhcCCCCcEEEeCCCC
Confidence            899999999999998 88899999999988754

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-36  Score=267.93  Aligned_cols=246  Identities=24%  Similarity=0.255  Sum_probs=205.4

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      .++++++|++|||||++|||++++++|+++|++|++++|+.++.++..+.+...  +.++.++.+|+++++++.++++++
T Consensus         4 ~~~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~   81 (263)
T PRK07814          4 DRFRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAA--GRRAHVVAADLAHPEATAGLAGQA   81 (263)
T ss_pred             ccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHH
Confidence            345689999999999999999999999999999999999988887777776543  457889999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          103 NSQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      .+.++++|+||||||.....  .+.+.++++.++++|+.+++.+++++.|+|.+.    ...++||++||.++..+.+  
T Consensus        82 ~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~~g~iv~~sS~~~~~~~~--  155 (263)
T PRK07814         82 VEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEH----SGGGSVINISSTMGRLAGR--  155 (263)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhh----cCCeEEEEEccccccCCCC--
Confidence            99999999999999975442  267889999999999999999999999999873    2368999999998877655  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----chhHhHHHHHHHhhc
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----GILRGFCNTVGKLVL  256 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~~~~~  256 (313)
                                   +...|+++|++++.++++++.++.+ +  |+||+|+||+++|++....    .+........+..+.
T Consensus       156 -------------~~~~Y~~sK~a~~~~~~~~~~e~~~-~--i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  219 (263)
T PRK07814        156 -------------GFAAYGTAKAALAHYTRLAALDLCP-R--IRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRL  219 (263)
T ss_pred             -------------CCchhHHHHHHHHHHHHHHHHHHCC-C--ceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCCCCCC
Confidence                         6788999999999999999999976 5  9999999999999875532    111122222233455


Q ss_pred             CChHHHHHHHHHHHccCCccCCCceeecCCcccCCCc
Q 021391          257 KNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNS  293 (313)
Q Consensus       257 ~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~  293 (313)
                      .+++|+|+.++|+++ +...+++|+++..+++...+.
T Consensus       220 ~~~~~va~~~~~l~~-~~~~~~~g~~~~~~~~~~~~~  255 (263)
T PRK07814        220 GDPEDIAAAAVYLAS-PAGSYLTGKTLEVDGGLTFPN  255 (263)
T ss_pred             cCHHHHHHHHHHHcC-ccccCcCCCEEEECCCccCCC
Confidence            789999999999997 777899999988776654433

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-36  Score=274.85  Aligned_cols=234  Identities=24%  Similarity=0.226  Sum_probs=197.0

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      +..+++||++|||||++|||+++++.|+++|++|++++|+.+++++..+++..   +..+..+.+|++|.++++.+++++
T Consensus         3 ~~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~---~~~~~~~~~Dv~d~~~v~~~~~~~   79 (296)
T PRK05872          3 PMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG---DDRVLTVVADVTDLAAMQAAAEEA   79 (296)
T ss_pred             CCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC---CCcEEEEEecCCCHHHHHHHHHHH
Confidence            34568999999999999999999999999999999999998888777666532   346777889999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          103 NSQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      .+.++++|++|||+|+....  .+.+.++|++++++|+.+++++++.+.|.|.+.      .|+||++||.++..+.+  
T Consensus        80 ~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~------~g~iv~isS~~~~~~~~--  151 (296)
T PRK05872         80 VERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER------RGYVLQVSSLAAFAAAP--  151 (296)
T ss_pred             HHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc------CCEEEEEeCHhhcCCCC--
Confidence            99999999999999986532  267889999999999999999999999999762      58999999999887766  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----hhHhHHHHH--HHh
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----ILRGFCNTV--GKL  254 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----~~~~~~~~~--~~~  254 (313)
                                   ....|++||++++.++++++.|+.++|  |+||+|+||+++|++.....    ....+....  +..
T Consensus       152 -------------~~~~Y~asKaal~~~~~~l~~e~~~~g--i~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~  216 (296)
T PRK05872        152 -------------GMAAYCASKAGVEAFANALRLEVAHHG--VTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLR  216 (296)
T ss_pred             -------------CchHHHHHHHHHHHHHHHHHHHHHHHC--cEEEEEecCcccchhhhhccccchhHHHHHhhCCCccc
Confidence                         678999999999999999999999999  99999999999999876431    111122221  234


Q ss_pred             hcCChHHHHHHHHHHHccCCccCCCceee
Q 021391          255 VLKNIPQGAATTCYVALHPQVQGVSGEYF  283 (313)
Q Consensus       255 ~~~~~~eva~~~~~l~~~~~~~~~tG~~~  283 (313)
                      +..+|+|+|+.++++++ +...+++|..+
T Consensus       217 ~~~~~~~va~~i~~~~~-~~~~~i~~~~~  244 (296)
T PRK05872        217 RTTSVEKCAAAFVDGIE-RRARRVYAPRW  244 (296)
T ss_pred             CCCCHHHHHHHHHHHHh-cCCCEEEchHH
Confidence            56789999999999998 66677776643

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.7e-36  Score=266.42  Aligned_cols=239  Identities=22%  Similarity=0.280  Sum_probs=196.6

Q ss_pred             CCCCCCEEEEeCCCC--chHHHHHHHHHHcCCEEEEEecC-----------chhHHHHHHHHHHhCCCCceEEEEccCCC
Q 021391           25 IDGTGLTAIVTGASS--GIGTETARVLALRGVHVIMAVRN-----------MAAGKDVREAIVKEIPSAKVDAMELDVSS   91 (313)
Q Consensus        25 ~~~~gk~~lItGas~--giG~aia~~La~~G~~V~l~~r~-----------~~~~~~~~~~l~~~~~~~~~~~~~~D~s~   91 (313)
                      |++++|++|||||++  |||++++++|+++|++|++++|+           ........+++...  +.+++++.+|+++
T Consensus         1 ~~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~   78 (256)
T PRK12748          1 LPLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESY--GVRCEHMEIDLSQ   78 (256)
T ss_pred             CCCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhc--CCeEEEEECCCCC
Confidence            467899999999994  99999999999999999999987           22222233334322  4578999999999


Q ss_pred             HHHHHHHHHHHhhcCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEEC
Q 021391           92 LASVRKFASEYNSQGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVS  169 (313)
Q Consensus        92 ~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~is  169 (313)
                      .+++..+++++.++++++|++|||+|+.... . +.+.++++..+++|+.+++.+++++.+.|.+     ...++||++|
T Consensus        79 ~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~~iv~~s  153 (256)
T PRK12748         79 PYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDG-----KAGGRIINLT  153 (256)
T ss_pred             HHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhh-----cCCeEEEEEC
Confidence            9999999999999999999999999976432 2 6678889999999999999999999999976     3468999999


Q ss_pred             CccccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHH
Q 021391          170 SEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCN  249 (313)
Q Consensus       170 S~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~  249 (313)
                      |..+..+.+               +...|+++|++++.++++++.++.+.|  |+|++|+||+++|++.... .......
T Consensus       154 s~~~~~~~~---------------~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~i~Pg~~~t~~~~~~-~~~~~~~  215 (256)
T PRK12748        154 SGQSLGPMP---------------DELAYAATKGAIEAFTKSLAPELAEKG--ITVNAVNPGPTDTGWITEE-LKHHLVP  215 (256)
T ss_pred             CccccCCCC---------------CchHHHHHHHHHHHHHHHHHHHHHHhC--eEEEEEEeCcccCCCCChh-HHHhhhc
Confidence            988776655               567899999999999999999999988  9999999999999976532 1122222


Q ss_pred             HHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          250 TVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       250 ~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      ..+..+..+|+|+|+.+.|+++ +.+.+++|+++..|++.
T Consensus       216 ~~~~~~~~~~~~~a~~~~~l~~-~~~~~~~g~~~~~d~g~  254 (256)
T PRK12748        216 KFPQGRVGEPVDAARLIAFLVS-EEAKWITGQVIHSEGGF  254 (256)
T ss_pred             cCCCCCCcCHHHHHHHHHHHhC-cccccccCCEEEecCCc
Confidence            2333456789999999999998 77889999999887653

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-36  Score=265.96  Aligned_cols=234  Identities=24%  Similarity=0.274  Sum_probs=197.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      +++||++|||||++|||++++++|+++|++|++++|+.+..++..+++     +.++.++++|+++.+++..+++.+.+.
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL-----GESALVIRADAGDVAAQKALAQALAEA   77 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999977666554443     456889999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          106 GRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      ++++|++|||+|..... . +.+.+++++++++|+.+++++++++.|+|.+       .+++|+++|..+..+.+     
T Consensus        78 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~~~~i~~~S~~~~~~~~-----  145 (249)
T PRK06500         78 FGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN-------PASIVLNGSINAHIGMP-----  145 (249)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-------CCEEEEEechHhccCCC-----
Confidence            99999999999976432 2 6788999999999999999999999999865       57899999988877655     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----hhH----hHHHHHHHhh
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----ILR----GFCNTVGKLV  255 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----~~~----~~~~~~~~~~  255 (313)
                                ....|+++|++++.++++++.++.++|  |++++|+||+++|++.....    ...    .+....+..+
T Consensus       146 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (249)
T PRK06500        146 ----------NSSVYAASKAALLSLAKTLSGELLPRG--IRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGR  213 (249)
T ss_pred             ----------CccHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCC
Confidence                      567999999999999999999999888  99999999999999754321    111    1122223345


Q ss_pred             cCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          256 LKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       256 ~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      ..+|+|+|++++|+++ +...+++|+.+..+|+.
T Consensus       214 ~~~~~~va~~~~~l~~-~~~~~~~g~~i~~~gg~  246 (249)
T PRK06500        214 FGTPEEIAKAVLYLAS-DESAFIVGSEIIVDGGM  246 (249)
T ss_pred             CcCHHHHHHHHHHHcC-ccccCccCCeEEECCCc
Confidence            6789999999999997 66789999999988764

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-36  Score=266.55  Aligned_cols=239  Identities=20%  Similarity=0.235  Sum_probs=199.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      +|++|||||+++||++++++|+++|++|++++|+....+...+++....+..++.++.+|+++.+++.++++++.+.+++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999999998888877777766543357899999999999999999999999999


Q ss_pred             eeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          109 LNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       109 id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                      +|++|||+|.....  .+.+.++|++.+++|+.+++++++++.+.|.++    +..++||++||..+..+.+        
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~----~~~~~iv~~ss~~~~~~~~--------  149 (259)
T PRK12384         82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRD----GIQGRIIQINSKSGKVGSK--------  149 (259)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhC----CCCcEEEEecCcccccCCC--------
Confidence            99999999976543  267888999999999999999999999999872    1157999999988766544        


Q ss_pred             CCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCccc-ccCCcccc-------------chhHhHHHHHH
Q 021391          187 NDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSI-VTNLFRYN-------------GILRGFCNTVG  252 (313)
Q Consensus       187 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v-~t~~~~~~-------------~~~~~~~~~~~  252 (313)
                             ....|++||+|++.++++++.++.++|  |+||+|+||.+ .|++....             +....+....+
T Consensus       150 -------~~~~Y~~sKaa~~~l~~~la~e~~~~g--i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (259)
T PRK12384        150 -------HNSGYSAAKFGGVGLTQSLALDLAEYG--ITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVP  220 (259)
T ss_pred             -------CCchhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCc
Confidence                   567899999999999999999999999  99999999975 66654321             01111222334


Q ss_pred             HhhcCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          253 KLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       253 ~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      .++...++|++++++||++ ..+.+++|+.+..+++.
T Consensus       221 ~~~~~~~~dv~~~~~~l~~-~~~~~~~G~~~~v~~g~  256 (259)
T PRK12384        221 LKRGCDYQDVLNMLLFYAS-PKASYCTGQSINVTGGQ  256 (259)
T ss_pred             ccCCCCHHHHHHHHHHHcC-cccccccCceEEEcCCE
Confidence            5567789999999999997 66789999988876543

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-36  Score=267.56  Aligned_cols=242  Identities=17%  Similarity=0.185  Sum_probs=201.8

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      ..|++++|++|||||++|||++++++|+++|++|++++|+.+..+...+++...  +.++.++.+|+++++++.++++++
T Consensus         3 ~~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~i~~~~~~~   80 (264)
T PRK07576          3 TMFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQA--GPEGLGVSADVRDYAAVEAAFAQI   80 (264)
T ss_pred             ccccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHH
Confidence            446789999999999999999999999999999999999988777766666554  346788999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          103 NSQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      .+.++++|++|||+|.....  .+.+.+++++.+++|+.+++.+++++.|.|.+     + +++||++||..+..+.+  
T Consensus        81 ~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~-----~-~g~iv~iss~~~~~~~~--  152 (264)
T PRK07576         81 ADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRR-----P-GASIIQISAPQAFVPMP--  152 (264)
T ss_pred             HHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-----C-CCEEEEECChhhccCCC--
Confidence            99999999999999865432  26678899999999999999999999999875     2 58999999998876655  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccc-cCCcccc----chhHhHHHHHHHhh
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIV-TNLFRYN----GILRGFCNTVGKLV  255 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~-t~~~~~~----~~~~~~~~~~~~~~  255 (313)
                                   .+..|+++|++++.|+++++.++..+|  |+||+|+||+++ |+.....    .....+....+..+
T Consensus       153 -------------~~~~Y~asK~a~~~l~~~la~e~~~~g--i~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~  217 (264)
T PRK07576        153 -------------MQAHVCAAKAGVDMLTRTLALEWGPEG--IRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKR  217 (264)
T ss_pred             -------------CccHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCCCC
Confidence                         678899999999999999999999999  999999999997 5532211    11111222334455


Q ss_pred             cCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          256 LKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       256 ~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      ..+|+|+|+.+++|++ +...+++|+++..++...
T Consensus       218 ~~~~~dva~~~~~l~~-~~~~~~~G~~~~~~gg~~  251 (264)
T PRK07576        218 NGTKQDIANAALFLAS-DMASYITGVVLPVDGGWS  251 (264)
T ss_pred             CCCHHHHHHHHHHHcC-hhhcCccCCEEEECCCcc
Confidence            6789999999999997 677899999999887654

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=4.2e-36  Score=264.22  Aligned_cols=238  Identities=22%  Similarity=0.226  Sum_probs=198.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEe-cCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAV-RNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      |++|+++||||++|||+++|++|+++|++|++.. ++....++..+++...  +.++.++.+|++|.+++.++++++.+.
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   78 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKAL--GFDFIASEGNVGDWDSTKAAFDKVKAE   78 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999988854 4555555555555443  456888999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          106 GRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      ++++|+||||+|.....  .+.+.+++++++++|+.+++.+++.++|.|.+     +..++||++||..+..+.+     
T Consensus        79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~~~iv~isS~~~~~~~~-----  148 (246)
T PRK12938         79 VGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVE-----RGWGRIINISSVNGQKGQF-----  148 (246)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH-----cCCeEEEEEechhccCCCC-----
Confidence            99999999999986532  26788999999999999999999999999987     3357999999988776655     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHHHHHHhhcCChHH
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCNTVGKLVLKNIPQ  261 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~e  261 (313)
                                ++..|+++|++++.++++++.++.+.|  |++|+|+||+++|++.....  .........+..+..++++
T Consensus       149 ----------~~~~y~~sK~a~~~~~~~l~~~~~~~g--i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (246)
T PRK12938        149 ----------GQTNYSTAKAGIHGFTMSLAQEVATKG--VTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDE  216 (246)
T ss_pred             ----------CChhHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEecccCCchhhhcChHHHHHHHhcCCccCCcCHHH
Confidence                      677899999999999999999999999  99999999999999865431  1122222334456789999


Q ss_pred             HHHHHHHHHccCCccCCCceeecCCccc
Q 021391          262 GAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       262 va~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      +++.+.||++ +...+++|+.+..++..
T Consensus       217 v~~~~~~l~~-~~~~~~~g~~~~~~~g~  243 (246)
T PRK12938        217 IGSIVAWLAS-EESGFSTGADFSLNGGL  243 (246)
T ss_pred             HHHHHHHHcC-cccCCccCcEEEECCcc
Confidence            9999999998 67789999999887653

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=4.9e-36  Score=265.21  Aligned_cols=248  Identities=23%  Similarity=0.253  Sum_probs=199.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      ++||+++||||++|||+++|+.|+++|++|++++|+.++.++..+++....++..+.++.+|++|++++.++++++.+.+
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999998888888877654444456778999999999999999999999


Q ss_pred             CCeeEEEEcccCCCC----C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          107 RPLNILINNAGIMAS----P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       107 g~id~lv~~ag~~~~----~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      +++|++|||||....    + .+.+.+.++..+++|+.+++.++++++|.|.+     +..++||++||.++..+...  
T Consensus        82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~~~iv~~sS~~~~~~~~~--  154 (256)
T PRK09186         82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKK-----QGGGNLVNISSIYGVVAPKF--  154 (256)
T ss_pred             CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHh-----cCCceEEEEechhhhccccc--
Confidence            999999999975421    2 26778899999999999999999999999987     34679999999877643210  


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHH
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQ  261 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~e  261 (313)
                         ...+.........|+++|++++.++++++.++.+.|  |+||+|+||.+.++...  .+...+....+.....+|+|
T Consensus       155 ---~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~--i~v~~i~Pg~~~~~~~~--~~~~~~~~~~~~~~~~~~~d  227 (256)
T PRK09186        155 ---EIYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSN--IRVNCVSPGGILDNQPE--AFLNAYKKCCNGKGMLDPDD  227 (256)
T ss_pred             ---hhccccccCCcchhHHHHHHHHHHHHHHHHHhCcCC--eEEEEEecccccCCCCH--HHHHHHHhcCCccCCCCHHH
Confidence               000111111234799999999999999999999998  99999999999876422  12222222233455789999


Q ss_pred             HHHHHHHHHccCCccCCCceeecCCccc
Q 021391          262 GAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       262 va~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      +|+.++++++ +...+++|+++..+++.
T Consensus       228 va~~~~~l~~-~~~~~~~g~~~~~~~g~  254 (256)
T PRK09186        228 ICGTLVFLLS-DQSKYITGQNIIVDDGF  254 (256)
T ss_pred             hhhhHhheec-cccccccCceEEecCCc
Confidence            9999999998 66789999999877654

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.8e-36  Score=262.10  Aligned_cols=241  Identities=27%  Similarity=0.323  Sum_probs=206.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      .++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++...  +.++.++.+|++++++++++++++.+
T Consensus         3 ~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   80 (250)
T PRK12939          3 SNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAA--GGRAHAIAADLADPASVQRFFDAAAA   80 (250)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999999988888777777554  45789999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          105 QGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      .++++|++|||+|.....  .+.+.++++..+++|+.+++.+++.+.|.+.+     .+.+++|++||..+..+.+    
T Consensus        81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~g~iv~isS~~~~~~~~----  151 (250)
T PRK12939         81 ALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRD-----SGRGRIVNLASDTALWGAP----  151 (250)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH-----cCCeEEEEECchhhccCCC----
Confidence            999999999999986543  26778899999999999999999999999987     4478999999988877655    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc---hhHhHHHHHHHhhcCCh
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG---ILRGFCNTVGKLVLKNI  259 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~  259 (313)
                                 ....|+++|++++.+++.++.++.+.+  |++++|+||+++|++.....   +...+....+..+..++
T Consensus       152 -----------~~~~y~~sK~~~~~~~~~l~~~~~~~~--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (250)
T PRK12939        152 -----------KLGAYVASKGAVIGMTRSLARELGGRG--ITVNAIAPGLTATEATAYVPADERHAYYLKGRALERLQVP  218 (250)
T ss_pred             -----------CcchHHHHHHHHHHHHHHHHHHHhhhC--EEEEEEEECCCCCccccccCChHHHHHHHhcCCCCCCCCH
Confidence                       567899999999999999999999888  99999999999999875432   22223333344567899


Q ss_pred             HHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          260 PQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       260 ~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      +|+|+.+++++. +...+++|+++..||+..
T Consensus       219 ~dva~~~~~l~~-~~~~~~~G~~i~~~gg~~  248 (250)
T PRK12939        219 DDVAGAVLFLLS-DAARFVTGQLLPVNGGFV  248 (250)
T ss_pred             HHHHHHHHHHhC-ccccCccCcEEEECCCcc
Confidence            999999999997 667899999999887643

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.7e-36  Score=261.81  Aligned_cols=237  Identities=27%  Similarity=0.349  Sum_probs=199.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCch-hHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMA-AGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      |++++|+++||||++|||+++++.|+++|++|+++.|+.+ ..++..+++...  +.++.++.+|+++.++++++++++.
T Consensus         1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~   78 (245)
T PRK12937          1 MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA--GGRAIAVQADVADAAAVTRLFDAAE   78 (245)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHH
Confidence            5678999999999999999999999999999998887543 445555555443  5578999999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          104 SQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      ++++++|++|||+|.....  .+.+.+++++++++|+.+++.+++++.|.|.+       .++||++||.++..+.+   
T Consensus        79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------~~~iv~~ss~~~~~~~~---  148 (245)
T PRK12937         79 TAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ-------GGRIINLSTSVIALPLP---  148 (245)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc-------CcEEEEEeeccccCCCC---
Confidence            9999999999999976432  26678889999999999999999999999865       57999999988776655   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc---chhHhHHHHHHHhhcCC
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN---GILRGFCNTVGKLVLKN  258 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~~  258 (313)
                                  ++..|+++|++++.++++++.++.+.|  |++++|+||+++|++....   .....+....+..+..+
T Consensus       149 ------------~~~~Y~~sK~a~~~~~~~~a~~~~~~~--i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (245)
T PRK12937        149 ------------GYGPYAASKAAVEGLVHVLANELRGRG--ITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPLERLGT  214 (245)
T ss_pred             ------------CCchhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeCCccCchhcccCCHHHHHHHHhcCCCCCCCC
Confidence                        677899999999999999999999988  9999999999999985332   12222233334456679


Q ss_pred             hHHHHHHHHHHHccCCccCCCceeecCCcc
Q 021391          259 IPQGAATTCYVALHPQVQGVSGEYFSDSNI  288 (313)
Q Consensus       259 ~~eva~~~~~l~~~~~~~~~tG~~~~~~~~  288 (313)
                      ++|+++.++|+++ +...+++|+++..+++
T Consensus       215 ~~d~a~~~~~l~~-~~~~~~~g~~~~~~~g  243 (245)
T PRK12937        215 PEEIAAAVAFLAG-PDGAWVNGQVLRVNGG  243 (245)
T ss_pred             HHHHHHHHHHHcC-ccccCccccEEEeCCC
Confidence            9999999999997 6778999999998765

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=1.2e-35  Score=262.51  Aligned_cols=238  Identities=22%  Similarity=0.258  Sum_probs=203.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      |+++||||++|||++++++|+++|++|++++|+.+..++..+++...  +.++.++.+|++|++++.++++++.+.++++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   78 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA--GGKAVAYKLDVSDKDQVFSAIDQAAEKFGGF   78 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999987777777776554  4578899999999999999999999999999


Q ss_pred             eEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCC
Q 021391          110 NILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIN  187 (313)
Q Consensus       110 d~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  187 (313)
                      |+||||+|......  +.+.+++++++++|+.+++.+++.+++.|.+.    +.+++||++||..+..+.+         
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~~~~~iv~~sS~~~~~~~~---------  145 (254)
T TIGR02415        79 DVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQ----GHGGKIINAASIAGHEGNP---------  145 (254)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhC----CCCeEEEEecchhhcCCCC---------
Confidence            99999999865422  67889999999999999999999999999873    2247999999998887766         


Q ss_pred             CCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccch-------------hHhHHHHHHHh
Q 021391          188 DESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI-------------LRGFCNTVGKL  254 (313)
Q Consensus       188 ~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~-------------~~~~~~~~~~~  254 (313)
                            .+..|+++|++++.++++++.++.+.|  |+|++|+||+++|++......             ...+....+..
T Consensus       146 ------~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (254)
T TIGR02415       146 ------ILSAYSSTKFAVRGLTQTAAQELAPKG--ITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALG  217 (254)
T ss_pred             ------CCcchHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCC
Confidence                  678999999999999999999999988  999999999999998653210             11222334445


Q ss_pred             hcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          255 VLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       255 ~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      +..+|+|++++++||++ +...+++|+++..|++...
T Consensus       218 ~~~~~~~~a~~~~~l~~-~~~~~~~g~~~~~d~g~~~  253 (254)
T TIGR02415       218 RPSEPEDVAGLVSFLAS-EDSDYITGQSILVDGGMVY  253 (254)
T ss_pred             CCCCHHHHHHHHHhhcc-cccCCccCcEEEecCCccC
Confidence            67899999999999998 6678999999998887553

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=1.1e-35  Score=260.10  Aligned_cols=228  Identities=24%  Similarity=0.294  Sum_probs=185.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecC-chhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRN-MAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      .++||++|||||++|||++++++|+++|++|++++++ .+..+++.+++       ...++.+|++|.+++.+++++   
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~-------~~~~~~~D~~~~~~~~~~~~~---   72 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET-------GATAVQTDSADRDAVIDVVRK---   72 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh-------CCeEEecCCCCHHHHHHHHHH---
Confidence            3789999999999999999999999999999988764 44444332221       356789999999988777753   


Q ss_pred             cCCCeeEEEEcccCCCC--CCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccc-ccccCCC
Q 021391          105 QGRPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHR-FAYSEGI  181 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~-~~~~~~~  181 (313)
                       ++++|++|||+|....  ..+.+.+++++.+++|+.+++.+++.+.+.|.+       .++||++||..+. .+.+   
T Consensus        73 -~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~~~~---  141 (237)
T PRK12742         73 -SGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPE-------GGRIIIIGSVNGDRMPVA---  141 (237)
T ss_pred             -hCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc-------CCeEEEEeccccccCCCC---
Confidence             5789999999997643  236778899999999999999999999999865       5799999998763 3333   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc-hhHhHHHHHHHhhcCChH
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG-ILRGFCNTVGKLVLKNIP  260 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~  260 (313)
                                  +...|+++|++++.++++++.++.+.|  |+||+|+||+++|++..... .........+..+..+|+
T Consensus       142 ------------~~~~Y~~sKaa~~~~~~~la~~~~~~g--i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~p~  207 (237)
T PRK12742        142 ------------GMAAYAASKSALQGMARGLARDFGPRG--ITINVVQPGPIDTDANPANGPMKDMMHSFMAIKRHGRPE  207 (237)
T ss_pred             ------------CCcchHHhHHHHHHHHHHHHHHHhhhC--eEEEEEecCcccCCccccccHHHHHHHhcCCCCCCCCHH
Confidence                        577899999999999999999999999  99999999999999865432 112222233445678999


Q ss_pred             HHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          261 QGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       261 eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      |+++.++||++ +.+.++||+.+..||+.
T Consensus       208 ~~a~~~~~l~s-~~~~~~~G~~~~~dgg~  235 (237)
T PRK12742        208 EVAGMVAWLAG-PEASFVTGAMHTIDGAF  235 (237)
T ss_pred             HHHHHHHHHcC-cccCcccCCEEEeCCCc
Confidence            99999999997 78899999999988764

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=1.1e-35  Score=260.34  Aligned_cols=232  Identities=22%  Similarity=0.251  Sum_probs=195.6

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEecC-chhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCee
Q 021391           32 AIVTGASSGIGTETARVLALRGVHVIMAVRN-MAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLN  110 (313)
Q Consensus        32 ~lItGas~giG~aia~~La~~G~~V~l~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~id  110 (313)
                      +|||||++|||+++|++|+++|++|++++|. .+..+...+++...  +.++.++.+|+++.+++.++++++.+.++++|
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~   78 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQ--GGNARLLQFDVADRVACRTLLEADIAEHGAYY   78 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            5899999999999999999999999999865 45566666666554  45789999999999999999999999999999


Q ss_pred             EEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHH-HHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCC
Q 021391          111 ILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLL-DTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIN  187 (313)
Q Consensus       111 ~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~-~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  187 (313)
                      ++|||+|......  +.+.++++.++++|+.+++++++.++ |.+.+     .+.++||++||.++..+.+         
T Consensus        79 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~~iv~vsS~~~~~~~~---------  144 (239)
T TIGR01831        79 GVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRA-----RQGGRIITLASVSGVMGNR---------  144 (239)
T ss_pred             EEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhh-----cCCeEEEEEcchhhccCCC---------
Confidence            9999999865432  56788999999999999999999886 44444     3368999999999887766         


Q ss_pred             CCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccch-hHhHHHHHHHhhcCChHHHHHHH
Q 021391          188 DESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI-LRGFCNTVGKLVLKNIPQGAATT  266 (313)
Q Consensus       188 ~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~eva~~~  266 (313)
                            ....|+++|++++.++++++.++.++|  |+||+|+||+++|++...... ........+..+..+|+|+++.+
T Consensus       145 ------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  216 (239)
T TIGR01831       145 ------GQVNYSAAKAGLIGATKALAVELAKRK--ITVNCIAPGLIDTEMLAEVEHDLDEALKTVPMNRMGQPAEVASLA  216 (239)
T ss_pred             ------CCcchHHHHHHHHHHHHHHHHHHhHhC--eEEEEEEEccCccccchhhhHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence                  677899999999999999999999999  999999999999998764321 22233344556678999999999


Q ss_pred             HHHHccCCccCCCceeecCCcc
Q 021391          267 CYVALHPQVQGVSGEYFSDSNI  288 (313)
Q Consensus       267 ~~l~~~~~~~~~tG~~~~~~~~  288 (313)
                      +||++ +.+.+++|+++..+|+
T Consensus       217 ~~l~~-~~~~~~~g~~~~~~gg  237 (239)
T TIGR01831       217 GFLMS-DGASYVTRQVISVNGG  237 (239)
T ss_pred             HHHcC-chhcCccCCEEEecCC
Confidence            99998 7789999999887765

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=1.7e-35  Score=260.86  Aligned_cols=211  Identities=17%  Similarity=0.186  Sum_probs=180.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      |+++||||++|||+++|++|+ +|++|++++|+.++++++.+++...+ ...+.++++|++|+++++++++++.+.+|++
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   78 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRG-ATSVHVLSFDAQDLDTHRELVKQTQELAGEI   78 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcc-CCceEEEEcccCCHHHHHHHHHHHHHhcCCC
Confidence            689999999999999999999 59999999999999988888886542 2357889999999999999999999999999


Q ss_pred             eEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCC
Q 021391          110 NILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIN  187 (313)
Q Consensus       110 d~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  187 (313)
                      |++|||+|+.... . +.+.+.+.+++++|+.+++.+++.++|.|.+.    ..+|+||++||.++..+.+         
T Consensus        79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~----~~~g~Iv~isS~~~~~~~~---------  145 (246)
T PRK05599         79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQ----TAPAAIVAFSSIAGWRARR---------  145 (246)
T ss_pred             CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhc----CCCCEEEEEeccccccCCc---------
Confidence            9999999986432 2 55666778889999999999999999999862    2358999999999887666         


Q ss_pred             CCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHHHHHHH
Q 021391          188 DESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGAATTC  267 (313)
Q Consensus       188 ~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~eva~~~~  267 (313)
                            ....|+++|+|+++++++++.|+.++|  |+||+|+||+++|++......         .....+|+|+|+.++
T Consensus       146 ------~~~~Y~asKaa~~~~~~~la~el~~~~--I~v~~v~PG~v~T~~~~~~~~---------~~~~~~pe~~a~~~~  208 (246)
T PRK05599        146 ------ANYVYGSTKAGLDAFCQGLADSLHGSH--VRLIIARPGFVIGSMTTGMKP---------APMSVYPRDVAAAVV  208 (246)
T ss_pred             ------CCcchhhHHHHHHHHHHHHHHHhcCCC--ceEEEecCCcccchhhcCCCC---------CCCCCCHHHHHHHHH
Confidence                  678999999999999999999999998  999999999999998643311         111358999999999


Q ss_pred             HHHcc
Q 021391          268 YVALH  272 (313)
Q Consensus       268 ~l~~~  272 (313)
                      ++++.
T Consensus       209 ~~~~~  213 (246)
T PRK05599        209 SAITS  213 (246)
T ss_pred             HHHhc
Confidence            99984

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.7e-36  Score=274.74  Aligned_cols=247  Identities=21%  Similarity=0.179  Sum_probs=200.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      ...+++|++|||||++|||++++++|+++|++|++++|+.+++++..+++...  +.++.++.+|++|+++++++++++.
T Consensus         3 ~~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~--g~~~~~v~~Dv~d~~~v~~~~~~~~   80 (334)
T PRK07109          3 LKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAA--GGEALAVVADVADAEAVQAAADRAE   80 (334)
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc--CCcEEEEEecCCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999998888888877654  5678899999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          104 SQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      +++|++|++|||+|.....  .+.+.+++++.+++|+.+++++++.++|.|.+     +..++||++||..+..+.+   
T Consensus        81 ~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~-----~~~g~iV~isS~~~~~~~~---  152 (334)
T PRK07109         81 EELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRP-----RDRGAIIQVGSALAYRSIP---  152 (334)
T ss_pred             HHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-----cCCcEEEEeCChhhccCCC---
Confidence            9999999999999975432  27788999999999999999999999999988     4468999999999887766   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHH
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQ  261 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~e  261 (313)
                                  .+..|+++|+++++|+++++.|+..++.+|+|++|+||.++|++......... ....+.....+|++
T Consensus       153 ------------~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~~~-~~~~~~~~~~~pe~  219 (334)
T PRK07109        153 ------------LQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSRLP-VEPQPVPPIYQPEV  219 (334)
T ss_pred             ------------cchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhhcc-ccccCCCCCCCHHH
Confidence                        67789999999999999999999875455999999999999997543210000 00112234568999


Q ss_pred             HHHHHHHHHccCCcc-CCCceeecCCcccCCCc
Q 021391          262 GAATTCYVALHPQVQ-GVSGEYFSDSNIYKPNS  293 (313)
Q Consensus       262 va~~~~~l~~~~~~~-~~tG~~~~~~~~~~~~~  293 (313)
                      +|+.++++++++... ++.|..+.........+
T Consensus       220 vA~~i~~~~~~~~~~~~vg~~~~~~~~~~~~~P  252 (334)
T PRK07109        220 VADAILYAAEHPRRELWVGGPAKAAILGNRLAP  252 (334)
T ss_pred             HHHHHHHHHhCCCcEEEeCcHHHHHHHHHHhCc
Confidence            999999999865322 34444444333333333

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.7e-35  Score=260.94  Aligned_cols=238  Identities=20%  Similarity=0.233  Sum_probs=198.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEE-EecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIM-AVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      |.||++|||||++|||++++++|+++|++|++ .+|+.+..++..+++...  +.++.++.+|++|++++.++++++.+.
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEAL--GRKALAVKANVGDVEKIKEMFAQIDEE   79 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999876 578887777777776554  457889999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCC-C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          106 GRPLNILINNAGIMAS-P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~-~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      ++++|+||||+|.... + .+.+.+.++.++++|+.+++.+++++.|.|.+     ++.++||++||..+..+.+     
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~g~iv~~sS~~~~~~~~-----  149 (250)
T PRK08063         80 FGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEK-----VGGGKIISLSSLGSIRYLE-----  149 (250)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-----cCCeEEEEEcchhhccCCC-----
Confidence            9999999999997543 2 36778889999999999999999999999987     4468999999987766544     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhH----HHHHHHhhcCCh
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGF----CNTVGKLVLKNI  259 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~----~~~~~~~~~~~~  259 (313)
                                +...|+++|++++.++++++.++.+.|  |++|+|+||+++|++..........    ....+.....++
T Consensus       150 ----------~~~~y~~sK~a~~~~~~~~~~~~~~~~--i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (250)
T PRK08063        150 ----------NYTTVGVSKAALEALTRYLAVELAPKG--IAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEP  217 (250)
T ss_pred             ----------CccHHHHHHHHHHHHHHHHHHHHhHhC--eEEEeEecCcccCchhhhccCchHHHHHHhcCCCCCCCcCH
Confidence                      567899999999999999999999999  9999999999999876532211111    112223346789


Q ss_pred             HHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          260 PQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       260 ~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      +|+|+.++++++ +...+++|+.+..+++.
T Consensus       218 ~dva~~~~~~~~-~~~~~~~g~~~~~~gg~  246 (250)
T PRK08063        218 EDVANAVLFLCS-PEADMIRGQTIIVDGGR  246 (250)
T ss_pred             HHHHHHHHHHcC-chhcCccCCEEEECCCe
Confidence            999999999997 56678999998877654

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.6e-35  Score=259.61  Aligned_cols=239  Identities=29%  Similarity=0.303  Sum_probs=202.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      |++++|++|||||++|||++++++|+++|++|++++|+.+..+...+.+..   +.++.++.+|+++++++.++++++.+
T Consensus         1 ~~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   77 (251)
T PRK07231          1 MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA---GGRAIAVAADVSDEADVEAAVAAALE   77 (251)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999998877776666543   35688999999999999999999988


Q ss_pred             cCCCeeEEEEcccCCCC--CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          105 QGRPLNILINNAGIMAS--PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      +++++|++|||+|....  +. +.+.+++++.+++|+.+++.+++.+.+.|.+     +..++||++||..+..+.+   
T Consensus        78 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~~iv~~sS~~~~~~~~---  149 (251)
T PRK07231         78 RFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRG-----EGGGAIVNVASTAGLRPRP---  149 (251)
T ss_pred             HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh-----cCCcEEEEEcChhhcCCCC---
Confidence            99999999999997533  22 6678899999999999999999999999987     4468999999998877655   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc------hhHhHHHHHHHhh
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG------ILRGFCNTVGKLV  255 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~------~~~~~~~~~~~~~  255 (313)
                                  +...|+.+|++++.+++.++.++.+.|  |++++++||+++|++.....      ....+....+...
T Consensus       150 ------------~~~~y~~sk~~~~~~~~~~a~~~~~~~--i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (251)
T PRK07231        150 ------------GLGWYNASKGAVITLTKALAAELGPDK--IRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGR  215 (251)
T ss_pred             ------------CchHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCC
Confidence                        677899999999999999999999888  99999999999999865431      1112222333445


Q ss_pred             cCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          256 LKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       256 ~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      ..+|+|+|++++++++ +...+++|+++..||+.
T Consensus       216 ~~~~~dva~~~~~l~~-~~~~~~~g~~~~~~gg~  248 (251)
T PRK07231        216 LGTPEDIANAALFLAS-DEASWITGVTLVVDGGR  248 (251)
T ss_pred             CcCHHHHHHHHHHHhC-ccccCCCCCeEEECCCc
Confidence            6789999999999997 66789999998887754

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=2.7e-35  Score=262.59  Aligned_cols=242  Identities=18%  Similarity=0.175  Sum_probs=187.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEec-CchhHHHHHHHHHHhCCCCceEEEEccCCCHHHH----HHHHHHHhh
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVR-NMAAGKDVREAIVKEIPSAKVDAMELDVSSLASV----RKFASEYNS  104 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v----~~~~~~~~~  104 (313)
                      ++++||||++|||++++++|+++|++|++++| +.+.++...+++.... +.++.++.+|++|++++    +++++++.+
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~   80 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARR-PNSAVTCQADLSNSATLFSRCEAIIDACFR   80 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhcc-CCceEEEEccCCCchhhHHHHHHHHHHHHH
Confidence            68999999999999999999999999999875 4566666666664432 34677899999999865    566666677


Q ss_pred             cCCCeeEEEEcccCCCC-CC-ccCc-----------cchhhhhhhhhhHHHHHHHHHHHHHHHhhcc-CCCCCeEEEECC
Q 021391          105 QGRPLNILINNAGIMAS-PF-MLSK-----------DNIELQFATNHLGHFLLTHLLLDTMKKTAQK-SSREGRIVNVSS  170 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~-~~-~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-~~~~g~iv~isS  170 (313)
                      .+|++|+||||||.... +. +.+.           +.+.+++++|+.+++.+++++.|.|.+.... .+..++||+++|
T Consensus        81 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s  160 (267)
T TIGR02685        81 AFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCD  160 (267)
T ss_pred             ccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehh
Confidence            88999999999997543 21 2222           2488999999999999999999998653110 123578999999


Q ss_pred             ccccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHH
Q 021391          171 EAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNT  250 (313)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~  250 (313)
                      ..+..+.+               ++.+|++||+|+++++++++.|+.++|  |+||+|+||+++|+..........+...
T Consensus       161 ~~~~~~~~---------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~~~~~~~~~~~~~~~~~~~  223 (267)
T TIGR02685       161 AMTDQPLL---------------GFTMYTMAKHALEGLTRSAALELAPLQ--IRVNGVAPGLSLLPDAMPFEVQEDYRRK  223 (267)
T ss_pred             hhccCCCc---------------ccchhHHHHHHHHHHHHHHHHHHhhhC--eEEEEEecCCccCccccchhHHHHHHHh
Confidence            88776655               678999999999999999999999999  9999999999987632211112222222


Q ss_pred             HHHh-hcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          251 VGKL-VLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       251 ~~~~-~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      .+.. +..+|+|+++.++|+++ +.+.++||+.+.++++..
T Consensus       224 ~~~~~~~~~~~~va~~~~~l~~-~~~~~~~G~~~~v~gg~~  263 (267)
T TIGR02685       224 VPLGQREASAEQIADVVIFLVS-PKAKYITGTCIKVDGGLS  263 (267)
T ss_pred             CCCCcCCCCHHHHHHHHHHHhC-cccCCcccceEEECCcee
Confidence            2322 46799999999999998 778999999999887654

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=3.1e-35  Score=258.14  Aligned_cols=237  Identities=24%  Similarity=0.301  Sum_probs=199.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      +++++|+++||||++|||++++++|+++|+.|++.+|+.+++++..+.+     +.++.++.+|+++.++++++++++.+
T Consensus         2 ~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (245)
T PRK12936          2 FDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL-----GERVKIFPANLSDRDEVKALGQKAEA   76 (245)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999887766654433     34688899999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          105 QGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      .++++|++|||+|.....  .+.+.+++++++++|+.+++++++++.+.+.+     +..++||++||..+..+.+    
T Consensus        77 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~~iv~~sS~~~~~~~~----  147 (245)
T PRK12936         77 DLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMR-----RRYGRIINITSVVGVTGNP----  147 (245)
T ss_pred             HcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHH-----hCCCEEEEECCHHhCcCCC----
Confidence            999999999999986542  25677899999999999999999999998876     3468999999998887766    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchh--HhHHHHHHHhhcCChH
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGIL--RGFCNTVGKLVLKNIP  260 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~  260 (313)
                                 ....|+++|+++..+++.++.++.+.|  |++++|+||+++|++.......  .......+..+..+|+
T Consensus       148 -----------~~~~Y~~sk~a~~~~~~~la~~~~~~~--i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (245)
T PRK12936        148 -----------GQANYCASKAGMIGFSKSLAQEIATRN--VTVNCVAPGFIESAMTGKLNDKQKEAIMGAIPMKRMGTGA  214 (245)
T ss_pred             -----------CCcchHHHHHHHHHHHHHHHHHhhHhC--eEEEEEEECcCcCchhcccChHHHHHHhcCCCCCCCcCHH
Confidence                       567899999999999999999999988  9999999999999876543211  1112223445567899


Q ss_pred             HHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          261 QGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       261 eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      ++++.++|+++ +...+++|+++..+++.
T Consensus       215 ~ia~~~~~l~~-~~~~~~~G~~~~~~~g~  242 (245)
T PRK12936        215 EVASAVAYLAS-SEAAYVTGQTIHVNGGM  242 (245)
T ss_pred             HHHHHHHHHcC-ccccCcCCCEEEECCCc
Confidence            99999999997 66778999999877654

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.4e-35  Score=288.27  Aligned_cols=238  Identities=24%  Similarity=0.286  Sum_probs=200.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      .++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++++|++++++++++++++.++
T Consensus         2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (520)
T PRK06484          2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL-----GPDHHALAMDVSDEAQIREGFEQLHRE   76 (520)
T ss_pred             CCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEeccCCHHHHHHHHHHHHHH
Confidence            457999999999999999999999999999999999988777666554     446788999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCC---C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          106 GRPLNILINNAGIMAS---P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~---~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      ++++|+||||||+..+   + .+.+.++|++++++|+.+++.++++++|+|.+.    +.+++||++||..+..+.+   
T Consensus        77 ~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~g~~iv~isS~~~~~~~~---  149 (520)
T PRK06484         77 FGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQ----GHGAAIVNVASGAGLVALP---  149 (520)
T ss_pred             hCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc----CCCCeEEEECCcccCCCCC---
Confidence            9999999999997422   2 367889999999999999999999999999872    2234999999999887766   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccch-----hHhHHHHHHHhhc
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI-----LRGFCNTVGKLVL  256 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~-----~~~~~~~~~~~~~  256 (313)
                                  ....|+++|+++++++++++.|+.+.|  |+||+|+||+++|++......     ........+..+.
T Consensus       150 ------------~~~~Y~asKaal~~l~~~la~e~~~~~--i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (520)
T PRK06484        150 ------------KRTAYSASKAAVISLTRSLACEWAAKG--IRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRL  215 (520)
T ss_pred             ------------CCchHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCC
Confidence                        677899999999999999999999999  999999999999998653210     1112223344456


Q ss_pred             CChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          257 KNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       257 ~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      .+|+++|+.++|+++ +...+++|+.+..++...
T Consensus       216 ~~~~~va~~v~~l~~-~~~~~~~G~~~~~~gg~~  248 (520)
T PRK06484        216 GRPEEIAEAVFFLAS-DQASYITGSTLVVDGGWT  248 (520)
T ss_pred             cCHHHHHHHHHHHhC-ccccCccCceEEecCCee
Confidence            789999999999998 678899999988776543

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-35  Score=260.05  Aligned_cols=244  Identities=23%  Similarity=0.231  Sum_probs=201.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      ++++||++|||||++|||.++|++|+++|++|++++|+.++.+...+.+...  +.++.++.+|++|+++++++++++.+
T Consensus         8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~Dl~d~~~i~~~~~~~~~   85 (259)
T PRK08213          8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEAL--GIDALWIAADVADEADIERLAEETLE   85 (259)
T ss_pred             hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999988877777666543  45788999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCC--CCccCccchhhhhhhhhhHHHHHHHHHHHH-HHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          105 QGRPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGHFLLTHLLLDT-MKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      .++++|++|||+|....  ..+.+.+.|++.+++|+.+++.+++++.++ |.+     +..+++|++||..+..+.+.. 
T Consensus        86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~-----~~~~~~v~~sS~~~~~~~~~~-  159 (259)
T PRK08213         86 RFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIP-----RGYGRIINVASVAGLGGNPPE-  159 (259)
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHh-----cCCeEEEEECChhhccCCCcc-
Confidence            98999999999997533  236778899999999999999999999998 655     335799999998776654311 


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--chhHhHHHHHHHhhcCCh
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--GILRGFCNTVGKLVLKNI  259 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~  259 (313)
                                +.+...|+++|++++.++++++.++.+.|  |++|+++||+++|++....  .+........+..+..++
T Consensus       160 ----------~~~~~~Y~~sKa~~~~~~~~~a~~~~~~g--i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (259)
T PRK08213        160 ----------VMDTIAYNTSKGAVINFTRALAAEWGPHG--IRVNAIAPGFFPTKMTRGTLERLGEDLLAHTPLGRLGDD  227 (259)
T ss_pred             ----------ccCcchHHHHHHHHHHHHHHHHHHhcccC--EEEEEEecCcCCCcchhhhhHHHHHHHHhcCCCCCCcCH
Confidence                      12457899999999999999999999999  9999999999999875532  111222223333455689


Q ss_pred             HHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          260 PQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       260 ~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      +|+|+.+++|++ +.+.+++|+.+..++..
T Consensus       228 ~~va~~~~~l~~-~~~~~~~G~~~~~~~~~  256 (259)
T PRK08213        228 EDLKGAALLLAS-DASKHITGQILAVDGGV  256 (259)
T ss_pred             HHHHHHHHHHhC-ccccCccCCEEEECCCe
Confidence            999999999997 78889999999987654

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=2.7e-35  Score=259.92  Aligned_cols=234  Identities=26%  Similarity=0.290  Sum_probs=197.0

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      +.+++++|++|||||++|||++++++|+++|++|++++|+.         +...  +.++.++++|++++++++++++++
T Consensus         2 ~~~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   70 (252)
T PRK08220          2 NAMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQE--DYPFATFVLDVSDAAAVAQVCQRL   70 (252)
T ss_pred             CccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhc--CCceEEEEecCCCHHHHHHHHHHH
Confidence            34778999999999999999999999999999999999985         1111  456889999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          103 NSQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      .+.++++|++|||+|.....  .+.+.++++..+++|+.+++.+++++.|.|.+     ...++||++||..+..+.+  
T Consensus        71 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~g~iv~~ss~~~~~~~~--  143 (252)
T PRK08220         71 LAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRR-----QRSGAIVTVGSNAAHVPRI--  143 (252)
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-----CCCCEEEEECCchhccCCC--
Confidence            99999999999999976542  26678899999999999999999999999987     4468999999988776554  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc---h---------hHhHH
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG---I---------LRGFC  248 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~---~---------~~~~~  248 (313)
                                   +...|+++|++++.++++++.++.+.|  |+||+|+||+++|++.....   .         .....
T Consensus       144 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  208 (252)
T PRK08220        144 -------------GMAAYGASKAALTSLAKCVGLELAPYG--VRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFK  208 (252)
T ss_pred             -------------CCchhHHHHHHHHHHHHHHHHHhhHhC--eEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHh
Confidence                         567899999999999999999999999  99999999999999754310   0         01111


Q ss_pred             HHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          249 NTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       249 ~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      ...+..+..+|+|+|++++||++ +...++||+++..+++..
T Consensus       209 ~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~g~~i~~~gg~~  249 (252)
T PRK08220        209 LGIPLGKIARPQEIANAVLFLAS-DLASHITLQDIVVDGGAT  249 (252)
T ss_pred             hcCCCcccCCHHHHHHHHHHHhc-chhcCccCcEEEECCCee
Confidence            22234567889999999999998 778899999999887654

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=4e-35  Score=258.34  Aligned_cols=238  Identities=26%  Similarity=0.292  Sum_probs=202.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      +++|++|||||+++||++++++|+++|++|++++|+.+..++..+++...  +.++.++.+|+++.++++++++.+.+.+
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~   78 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAK--GGNAQAFACDITDRDSVDTAVAAAEQAL   78 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999988877777666554  4578899999999999999999999999


Q ss_pred             CCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCC
Q 021391          107 RPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFD  184 (313)
Q Consensus       107 g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  184 (313)
                      +++|++|||+|..... . +.+.++++..+++|+.+++.+++.+.+.|.+     .+.++||++||..+..+.+      
T Consensus        79 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~~ii~iss~~~~~~~~------  147 (250)
T TIGR03206        79 GPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVE-----RGAGRIVNIASDAARVGSS------  147 (250)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-----cCCeEEEEECchhhccCCC------
Confidence            9999999999975432 2 5677889999999999999999999999987     3467999999998876655      


Q ss_pred             CCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--------chhHhHHHHHHHhhc
Q 021391          185 KINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--------GILRGFCNTVGKLVL  256 (313)
Q Consensus       185 ~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--------~~~~~~~~~~~~~~~  256 (313)
                               ....|+++|+|++.++++++.++.+.|  |+++.++||+++|++....        .....+....+....
T Consensus       148 ---------~~~~Y~~sK~a~~~~~~~la~~~~~~~--i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (250)
T TIGR03206       148 ---------GEAVYAACKGGLVAFSKTMAREHARHG--ITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRL  216 (250)
T ss_pred             ---------CCchHHHHHHHHHHHHHHHHHHHhHhC--cEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCC
Confidence                     567899999999999999999999888  9999999999999975432        011222333344456


Q ss_pred             CChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          257 KNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       257 ~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      .+++|+|+.++++++ +...+++|+++..+++.
T Consensus       217 ~~~~dva~~~~~l~~-~~~~~~~g~~~~~~~g~  248 (250)
T TIGR03206       217 GQPDDLPGAILFFSS-DDASFITGQVLSVSGGL  248 (250)
T ss_pred             cCHHHHHHHHHHHcC-cccCCCcCcEEEeCCCc
Confidence            789999999999998 77889999999987653

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-35  Score=263.32  Aligned_cols=224  Identities=23%  Similarity=0.276  Sum_probs=188.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      .++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|++++.++++++.+.
T Consensus         3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~   80 (275)
T PRK05876          3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE--GFDVHGVMCDVRHREEVTHLADEAFRL   80 (275)
T ss_pred             CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999998888887777644  457889999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          106 GRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      +|++|+||||||+....  .+.+.+++++++++|+.+++++++.++|.|.++    +.+|+||++||.++..+.+     
T Consensus        81 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~----~~~g~iv~isS~~~~~~~~-----  151 (275)
T PRK05876         81 LGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQ----GTGGHVVFTASFAGLVPNA-----  151 (275)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc----CCCCEEEEeCChhhccCCC-----
Confidence            99999999999986432  277889999999999999999999999999873    2268999999999887766     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHh----------HHHHHH-
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRG----------FCNTVG-  252 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~----------~~~~~~-  252 (313)
                                +...|+++|+++++++++++.|+.++|  |+|++|+||+++|++..+......          .....+ 
T Consensus       152 ----------~~~~Y~asK~a~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (275)
T PRK05876        152 ----------GLGAYGVAKYGVVGLAETLAREVTADG--IGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPL  219 (275)
T ss_pred             ----------CCchHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEEeCccccccccchhhhcCccccccccccccccccc
Confidence                      678899999999999999999999888  999999999999998654210000          000011 


Q ss_pred             HhhcCChHHHHHHHHHHHcc
Q 021391          253 KLVLKNIPQGAATTCYVALH  272 (313)
Q Consensus       253 ~~~~~~~~eva~~~~~l~~~  272 (313)
                      .....+|+++|+.++..+..
T Consensus       220 ~~~~~~~~dva~~~~~ai~~  239 (275)
T PRK05876        220 QDDNLGVDDIAQLTADAILA  239 (275)
T ss_pred             cccCCCHHHHHHHHHHHHHc
Confidence            12246899999999988863

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-34  Score=259.69  Aligned_cols=244  Identities=21%  Similarity=0.170  Sum_probs=203.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      +++++|++|||||++|||+++++.|+++|++|++++|+.+..+...+++.....+.++.++.+|+++++++.++++++.+
T Consensus         3 ~~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (276)
T PRK05875          3 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATA   82 (276)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999887777766665432235788999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCC--CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          105 QGRPLNILINNAGIMAS--PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      +++++|++|||+|....  +. +.+.++++.++++|+.+++.+++++.+.|.+     ...++||++||..+..+.+   
T Consensus        83 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~g~iv~~sS~~~~~~~~---  154 (276)
T PRK05875         83 WHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVR-----GGGGSFVGISSIAASNTHR---  154 (276)
T ss_pred             HcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-----cCCcEEEEEechhhcCCCC---
Confidence            99999999999997532  22 5677889999999999999999999999987     3468999999998776555   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchh----HhHHHHHHHhhcC
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGIL----RGFCNTVGKLVLK  257 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~----~~~~~~~~~~~~~  257 (313)
                                  +..+|+++|++++.++++++.++...+  |++++|+||+++|++.......    ..+....+..+..
T Consensus       155 ------------~~~~Y~~sK~a~~~~~~~~~~~~~~~~--i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (276)
T PRK05875        155 ------------WFGAYGVTKSAVDHLMKLAADELGPSW--VRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVG  220 (276)
T ss_pred             ------------CCcchHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCccCCccccccccCHHHHHHHHcCCCCCCCc
Confidence                        567899999999999999999999999  9999999999999986542111    1112222334566


Q ss_pred             ChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          258 NIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       258 ~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      +++|+|+.++||++ ....+++|+++..+++...
T Consensus       221 ~~~dva~~~~~l~~-~~~~~~~g~~~~~~~g~~~  253 (276)
T PRK05875        221 EVEDVANLAMFLLS-DAASWITGQVINVDGGHML  253 (276)
T ss_pred             CHHHHHHHHHHHcC-chhcCcCCCEEEECCCeec
Confidence            89999999999998 5567899999998876654

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=3.8e-35  Score=258.65  Aligned_cols=237  Identities=25%  Similarity=0.215  Sum_probs=197.7

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEecC-chhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCee
Q 021391           32 AIVTGASSGIGTETARVLALRGVHVIMAVRN-MAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLN  110 (313)
Q Consensus        32 ~lItGas~giG~aia~~La~~G~~V~l~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~id  110 (313)
                      ++||||++|||+++++.|+++|++|++++|+ .+.+++..+++........+.++.+|++|+++++++++++.+.++++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            8999999999999999999999999999998 666766666665443233456789999999999999999999999999


Q ss_pred             EEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCC
Q 021391          111 ILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIND  188 (313)
Q Consensus       111 ~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~  188 (313)
                      ++|||+|.....  .+.+.+++++++++|+.+++.+++.++|.|.+     .+.++||++||..+..+.+          
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~~~ii~~ss~~~~~~~~----------  146 (251)
T PRK07069         82 VLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRA-----SQPASIVNISSVAAFKAEP----------  146 (251)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhh-----cCCcEEEEecChhhccCCC----------
Confidence            999999986543  26678899999999999999999999999987     3468999999999887665          


Q ss_pred             CCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc-------hhHhHHHHHHHhhcCChHH
Q 021391          189 ESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG-------ILRGFCNTVGKLVLKNIPQ  261 (313)
Q Consensus       189 ~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~-------~~~~~~~~~~~~~~~~~~e  261 (313)
                           ++..|+++|++++.++++++.++.+++.+|+|++|+||+++|++.....       ......+..+..+..+|+|
T Consensus       147 -----~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (251)
T PRK07069        147 -----DYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDD  221 (251)
T ss_pred             -----CCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHH
Confidence                 6778999999999999999999988877799999999999999865320       1111222333345678999


Q ss_pred             HHHHHHHHHccCCccCCCceeecCCccc
Q 021391          262 GAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       262 va~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      +|+.+++|++ +...++||+.+..+++.
T Consensus       222 va~~~~~l~~-~~~~~~~g~~i~~~~g~  248 (251)
T PRK07069        222 VAHAVLYLAS-DESRFVTGAELVIDGGI  248 (251)
T ss_pred             HHHHHHHHcC-ccccCccCCEEEECCCe
Confidence            9999999987 67889999998877653

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-35  Score=256.40  Aligned_cols=212  Identities=17%  Similarity=0.159  Sum_probs=176.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCee
Q 021391           31 TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLN  110 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~id  110 (313)
                      +++||||++|||++++++|+++|++|++++|+.+++++..+++       ++.++++|++++++++++++++.+   ++|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~~~~~~~---~id   71 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-------DVDAIVCDNTDPASLEEARGLFPH---HLD   71 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-------cCcEEecCCCCHHHHHHHHHHHhh---cCc
Confidence            5899999999999999999999999999999987766655433       356789999999999999887742   699


Q ss_pred             EEEEcccCCCC---C----CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          111 ILINNAGIMAS---P----FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       111 ~lv~~ag~~~~---~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      ++|||+|....   +    ...+.++|++++++|+.+++++++++.|.|.+       +|+||++||.+.    +     
T Consensus        72 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-------~g~Iv~isS~~~----~-----  135 (223)
T PRK05884         72 TIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRS-------GGSIISVVPENP----P-----  135 (223)
T ss_pred             EEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-------CCeEEEEecCCC----C-----
Confidence            99999985321   1    11146789999999999999999999999965       589999999761    2     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHHH
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGA  263 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~eva  263 (313)
                                ...+|+++|+|+.+|+++++.|+.++|  ||||+|+||+++|++.....       ..+   ..+|+|++
T Consensus       136 ----------~~~~Y~asKaal~~~~~~la~e~~~~g--I~v~~v~PG~v~t~~~~~~~-------~~p---~~~~~~ia  193 (223)
T PRK05884        136 ----------AGSAEAAIKAALSNWTAGQAAVFGTRG--ITINAVACGRSVQPGYDGLS-------RTP---PPVAAEIA  193 (223)
T ss_pred             ----------CccccHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCccCchhhhhcc-------CCC---CCCHHHHH
Confidence                      456899999999999999999999999  99999999999998643211       111   23799999


Q ss_pred             HHHHHHHccCCccCCCceeecCCcccCC
Q 021391          264 ATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       264 ~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      +.++||++ +.+.++||+.+..||+...
T Consensus       194 ~~~~~l~s-~~~~~v~G~~i~vdgg~~~  220 (223)
T PRK05884        194 RLALFLTT-PAARHITGQTLHVSHGALA  220 (223)
T ss_pred             HHHHHHcC-chhhccCCcEEEeCCCeec
Confidence            99999998 8889999999998876543

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-35  Score=259.48  Aligned_cols=238  Identities=20%  Similarity=0.230  Sum_probs=188.2

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc----hhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHH
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM----AAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFA   99 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~----~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~   99 (313)
                      ++.+++|++|||||++|||+++|+.|+++|++|++++++.    +..++..+++...  +.++.++++|+++++++++++
T Consensus         3 ~~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~   80 (257)
T PRK12744          3 DHSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAA--GAKAVAFQADLTTAAAVEKLF   80 (257)
T ss_pred             CCCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHh--CCcEEEEecCcCCHHHHHHHH
Confidence            4567899999999999999999999999999977776532    3344444555443  457889999999999999999


Q ss_pred             HHHhhcCCCeeEEEEcccCCCC-C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEE-CCcccccc
Q 021391          100 SEYNSQGRPLNILINNAGIMAS-P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNV-SSEAHRFA  176 (313)
Q Consensus       100 ~~~~~~~g~id~lv~~ag~~~~-~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~i-sS~~~~~~  176 (313)
                      +++.+.++++|++|||||.... + .+.+.+++++++++|+.+++.+++++.|.|.+       .++++++ ||..+. +
T Consensus        81 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-------~~~iv~~~ss~~~~-~  152 (257)
T PRK12744         81 DDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND-------NGKIVTLVTSLLGA-F  152 (257)
T ss_pred             HHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc-------CCCEEEEecchhcc-c
Confidence            9999999999999999997543 2 26778899999999999999999999999865       4678776 554432 2


Q ss_pred             ccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhH------hHHHH
Q 021391          177 YSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILR------GFCNT  250 (313)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~------~~~~~  250 (313)
                      .+               .+..|++||+|++.++++++.|+.+.|  |+||+|+||++.|++........      .....
T Consensus       153 ~~---------------~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~  215 (257)
T PRK12744        153 TP---------------FYSAYAGSKAPVEHFTRAASKEFGARG--ISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAAL  215 (257)
T ss_pred             CC---------------CcccchhhHHHHHHHHHHHHHHhCcCc--eEEEEEecCccccchhccccccchhhcccccccc
Confidence            23               567899999999999999999999988  99999999999998754321111      00011


Q ss_pred             HHH--hhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          251 VGK--LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       251 ~~~--~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      .+.  .+...|+|+|+.+.||++ + ..+++|+.+..+++..
T Consensus       216 ~~~~~~~~~~~~dva~~~~~l~~-~-~~~~~g~~~~~~gg~~  255 (257)
T PRK12744        216 SPFSKTGLTDIEDIVPFIRFLVT-D-GWWITGQTILINGGYT  255 (257)
T ss_pred             cccccCCCCCHHHHHHHHHHhhc-c-cceeecceEeecCCcc
Confidence            111  156789999999999998 4 5789999999886643

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=7.7e-35  Score=256.50  Aligned_cols=239  Identities=28%  Similarity=0.308  Sum_probs=194.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEe-cCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAV-RNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .|++|||||++|||+++++.|+++|++|++++ |+.+..+...+++...  +.++.++.+|+++++++.++++++.+.++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAA--GGRACVVAGDVANEADVIAMFDAVQSAFG   79 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            37999999999999999999999999998875 5666666666666543  45789999999999999999999998899


Q ss_pred             CeeEEEEcccCCCC--C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCC
Q 021391          108 PLNILINNAGIMAS--P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFD  184 (313)
Q Consensus       108 ~id~lv~~ag~~~~--~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  184 (313)
                      ++|++|||+|....  + .+.+.++++..+++|+.+++.+++.+++.+....  .+..++||++||.++..+.+.     
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~~~~ii~~sS~~~~~~~~~-----  152 (248)
T PRK06947         80 RLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDR--GGRGGAIVNVSSIASRLGSPN-----  152 (248)
T ss_pred             CCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC--CCCCcEEEEECchhhcCCCCC-----
Confidence            99999999997643  2 2678889999999999999999999999987621  122578999999888765441     


Q ss_pred             CCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc---hhHhHHHHHHHhhcCChHH
Q 021391          185 KINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG---ILRGFCNTVGKLVLKNIPQ  261 (313)
Q Consensus       185 ~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~e  261 (313)
                               .+..|++||++++.++++++.++.+.|  |+|+.|+||+++|++.....   .........+..+..++++
T Consensus       153 ---------~~~~Y~~sK~~~~~~~~~la~~~~~~~--i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~e~  221 (248)
T PRK06947        153 ---------EYVDYAGSKGAVDTLTLGLAKELGPHG--VRVNAVRPGLIETEIHASGGQPGRAARLGAQTPLGRAGEADE  221 (248)
T ss_pred             ---------CCcccHhhHHHHHHHHHHHHHHhhhhC--cEEEEEeccCcccccccccCCHHHHHHHhhcCCCCCCcCHHH
Confidence                     245799999999999999999999988  99999999999999854321   1111112223345678999


Q ss_pred             HHHHHHHHHccCCccCCCceeecCCcc
Q 021391          262 GAATTCYVALHPQVQGVSGEYFSDSNI  288 (313)
Q Consensus       262 va~~~~~l~~~~~~~~~tG~~~~~~~~  288 (313)
                      +++.++|+++ +...+++|++|..||+
T Consensus       222 va~~~~~l~~-~~~~~~~G~~~~~~gg  247 (248)
T PRK06947        222 VAETIVWLLS-DAASYVTGALLDVGGG  247 (248)
T ss_pred             HHHHHHHHcC-ccccCcCCceEeeCCC
Confidence            9999999997 6678999999988764

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.8e-35  Score=256.47  Aligned_cols=239  Identities=26%  Similarity=0.282  Sum_probs=201.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      |+++||++|||||+++||++++++|+++|++|++++|+.+..++..+++.   .+.++.++.+|++|+++++++++++.+
T Consensus         1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~i~~   77 (252)
T PRK06138          1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA---AGGRAFARQGDVGSAEAVEALVDFVAA   77 (252)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh---cCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            56889999999999999999999999999999999999887777666654   255789999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          105 QGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      +++++|+||||+|.....  .+.+.+++++++++|+.+++.+++.+++.|.+     ...++||++||..+..+.+    
T Consensus        78 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~~ii~~sS~~~~~~~~----  148 (252)
T PRK06138         78 RWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQR-----QGGGSIVNTASQLALAGGR----  148 (252)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHh-----cCCeEEEEECChhhccCCC----
Confidence            999999999999976543  26678899999999999999999999999987     3468999999998877655    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccch----hHhHHH----HHHHh
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI----LRGFCN----TVGKL  254 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~----~~~~~~----~~~~~  254 (313)
                                 ....|+++|++++.++++++.++...|  |++++++||.+.|++......    ......    ..+..
T Consensus       149 -----------~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (252)
T PRK06138        149 -----------GRAAYVASKGAIASLTRAMALDHATDG--IRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMN  215 (252)
T ss_pred             -----------CccHHHHHHHHHHHHHHHHHHHHHhcC--eEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCC
Confidence                       567899999999999999999999988  999999999999997653210    011111    11222


Q ss_pred             hcCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          255 VLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       255 ~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      ...+++++|+.+++++. +...+++|+++..+++.
T Consensus       216 ~~~~~~d~a~~~~~l~~-~~~~~~~g~~~~~~~g~  249 (252)
T PRK06138        216 RFGTAEEVAQAALFLAS-DESSFATGTTLVVDGGW  249 (252)
T ss_pred             CCcCHHHHHHHHHHHcC-chhcCccCCEEEECCCe
Confidence            35689999999999997 56689999999887664

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-34  Score=254.55  Aligned_cols=230  Identities=24%  Similarity=0.247  Sum_probs=193.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCC--HHHHHHHHHHHh
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSS--LASVRKFASEYN  103 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~--~~~v~~~~~~~~  103 (313)
                      +|+||+++||||++|||++++++|+++|++|++++|+.+..+...+++.... +..+.++.+|+++  .+++.++++++.
T Consensus         3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~i~   81 (239)
T PRK08703          3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAG-HPEPFAIRFDLMSAEEKEFEQFAATIA   81 (239)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcC-CCCcceEEeeecccchHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999988887777775432 3457788999986  568999999998


Q ss_pred             hcC-CCeeEEEEcccCCCC--C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccC
Q 021391          104 SQG-RPLNILINNAGIMAS--P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSE  179 (313)
Q Consensus       104 ~~~-g~id~lv~~ag~~~~--~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~  179 (313)
                      +.+ +++|++|||||....  + .+.+.+++++.+++|+.+++.+++++.|.|.+     ...+++|+++|..+..+.+ 
T Consensus        82 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~-----~~~~~iv~~ss~~~~~~~~-  155 (239)
T PRK08703         82 EATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQ-----SPDASVIFVGESHGETPKA-  155 (239)
T ss_pred             HHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHh-----CCCCEEEEEeccccccCCC-
Confidence            888 789999999997532  2 36778899999999999999999999999987     4468999999988776655 


Q ss_pred             CCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccC-CCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCC
Q 021391          180 GIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKED-GVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKN  258 (313)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~-g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  258 (313)
                                    ...+|++||++++.++++++.|+.++ +  |+||+|+||+++|++.........      .....+
T Consensus       156 --------------~~~~Y~~sKaa~~~~~~~la~e~~~~~~--i~v~~v~pG~v~t~~~~~~~~~~~------~~~~~~  213 (239)
T PRK08703        156 --------------YWGGFGASKAALNYLCKVAADEWERFGN--LRANVLVPGPINSPQRIKSHPGEA------KSERKS  213 (239)
T ss_pred             --------------CccchHHhHHHHHHHHHHHHHHhccCCC--eEEEEEecCcccCccccccCCCCC------ccccCC
Confidence                          56789999999999999999999876 5  999999999999997553211110      112468


Q ss_pred             hHHHHHHHHHHHccCCccCCCceeecC
Q 021391          259 IPQGAATTCYVALHPQVQGVSGEYFSD  285 (313)
Q Consensus       259 ~~eva~~~~~l~~~~~~~~~tG~~~~~  285 (313)
                      +++++..++||++ +.+.++||+++.+
T Consensus       214 ~~~~~~~~~~~~~-~~~~~~~g~~~~~  239 (239)
T PRK08703        214 YGDVLPAFVWWAS-AESKGRSGEIVYL  239 (239)
T ss_pred             HHHHHHHHHHHhC-ccccCcCCeEeeC
Confidence            9999999999998 8899999998753

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-34  Score=254.49  Aligned_cols=239  Identities=25%  Similarity=0.250  Sum_probs=198.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+..+...+++...  +.++.++.+|+++.++++.+++++.+
T Consensus         2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (250)
T PRK07774          2 GRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVAD--GGTAIAVQVDVSDPDSAKAMADATVS   79 (250)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999987777776666543  34678899999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCC----C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccC
Q 021391          105 QGRPLNILINNAGIMAS----P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSE  179 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~----~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~  179 (313)
                      .++++|+||||+|+...    + .+.+.+.+++++++|+.+++.+++++.|.|.+     .+.++||++||.++..    
T Consensus        80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~~iv~~sS~~~~~----  150 (250)
T PRK07774         80 AFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAK-----RGGGAIVNQSSTAAWL----  150 (250)
T ss_pred             HhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHH-----hCCcEEEEEecccccC----
Confidence            99999999999998642    2 25677889999999999999999999999987     3468999999987653    


Q ss_pred             CCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc---hhHhHHHHHHHhhc
Q 021391          180 GIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG---ILRGFCNTVGKLVL  256 (313)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~---~~~~~~~~~~~~~~  256 (313)
                                    +...|++||++++.++++++.++...|  |++++++||.++|++.....   +.+...+..+....
T Consensus       151 --------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~  214 (250)
T PRK07774        151 --------------YSNFYGLAKVGLNGLTQQLARELGGMN--IRVNAIAPGPIDTEATRTVTPKEFVADMVKGIPLSRM  214 (250)
T ss_pred             --------------CccccHHHHHHHHHHHHHHHHHhCccC--eEEEEEecCcccCccccccCCHHHHHHHHhcCCCCCC
Confidence                          346799999999999999999999888  99999999999999865432   11222333333345


Q ss_pred             CChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          257 KNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       257 ~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      .+++|+++.++++++ +...+++|+++..+++..+
T Consensus       215 ~~~~d~a~~~~~~~~-~~~~~~~g~~~~v~~g~~~  248 (250)
T PRK07774        215 GTPEDLVGMCLFLLS-DEASWITGQIFNVDGGQII  248 (250)
T ss_pred             cCHHHHHHHHHHHhC-hhhhCcCCCEEEECCCeec
Confidence            689999999999997 5556789999887765443

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.9e-35  Score=255.22  Aligned_cols=225  Identities=25%  Similarity=0.261  Sum_probs=185.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      |+++||+++||||++|||++++++|+++|++|++++|+.....           ..++.++.+|++++      ++++.+
T Consensus         1 ~~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~-----------~~~~~~~~~D~~~~------~~~~~~   63 (235)
T PRK06550          1 QEFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL-----------SGNFHFLQLDLSDD------LEPLFD   63 (235)
T ss_pred             CCCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc-----------CCcEEEEECChHHH------HHHHHH
Confidence            4588999999999999999999999999999999999854210           23688999999997      344444


Q ss_pred             cCCCeeEEEEcccCCCC--C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          105 QGRPLNILINNAGIMAS--P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~--~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      .++++|++|||+|....  + .+.+.+++++.+++|+.+++++++++.|.+.+     ++.++||++||..+..+.+   
T Consensus        64 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~~iv~~sS~~~~~~~~---  135 (235)
T PRK06550         64 WVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLE-----RKSGIIINMCSIASFVAGG---  135 (235)
T ss_pred             hhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-----cCCcEEEEEcChhhccCCC---
Confidence            56899999999997532  2 36778899999999999999999999999987     4468999999998877655   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-c---hhHhHHHHHHHhhcC
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-G---ILRGFCNTVGKLVLK  257 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-~---~~~~~~~~~~~~~~~  257 (313)
                                  +...|+++|++++.++++++.++.++|  |+||+|+||+++|++.... .   .........+..+..
T Consensus       136 ------------~~~~Y~~sK~a~~~~~~~la~~~~~~g--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (235)
T PRK06550        136 ------------GGAAYTASKHALAGFTKQLALDYAKDG--IQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWA  201 (235)
T ss_pred             ------------CCcccHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCCccCcccccccCchHHHHHHhccCCcCCCC
Confidence                        567899999999999999999999988  9999999999999975432 1   111222233445578


Q ss_pred             ChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          258 NIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       258 ~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      +|+|+|+.++||++ +.+.+++|+++..||+.
T Consensus       202 ~~~~~a~~~~~l~s-~~~~~~~g~~~~~~gg~  232 (235)
T PRK06550        202 EPEEVAELTLFLAS-GKADYMQGTIVPIDGGW  232 (235)
T ss_pred             CHHHHHHHHHHHcC-hhhccCCCcEEEECCce
Confidence            99999999999997 77789999999988764

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-34  Score=255.61  Aligned_cols=240  Identities=23%  Similarity=0.235  Sum_probs=199.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCE-EEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVH-VIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~-V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      .+++|+++||||++|||++++++|+++|++ |++++|+.+..+...+++...  +.++.++.+|+++++++.++++.+.+
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEAL--GAKAVFVQADLSDVEDCRRVVAAADE   80 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            378999999999999999999999999998 999999987777666666433  55788899999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          105 QGRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      +++++|++|||+|......  +.+.+.++.++++|+.+++.+++++++.|.+.    ...+++|++||..+..+.+    
T Consensus        81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~~~g~iv~~ss~~~~~~~~----  152 (260)
T PRK06198         81 AFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRR----KAEGTIVNIGSMSAHGGQP----  152 (260)
T ss_pred             HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc----CCCCEEEEECCcccccCCC----
Confidence            9999999999999765432  67889999999999999999999999999873    2357999999998876555    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc---------chhHhHHHHHHH
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN---------GILRGFCNTVGK  253 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~---------~~~~~~~~~~~~  253 (313)
                                 ....|+++|++++.++++++.++...|  |+||+|+||++.|++....         .+........+.
T Consensus       153 -----------~~~~Y~~sK~a~~~~~~~~a~e~~~~~--i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (260)
T PRK06198        153 -----------FLAAYCASKGALATLTRNAAYALLRNR--IRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPF  219 (260)
T ss_pred             -----------CcchhHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCc
Confidence                       567899999999999999999999999  9999999999999874321         111111112233


Q ss_pred             hhcCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          254 LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       254 ~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      .+..+++|+++.++++++ +...+++|+++..|++.
T Consensus       220 ~~~~~~~~~a~~~~~l~~-~~~~~~~G~~~~~~~~~  254 (260)
T PRK06198        220 GRLLDPDEVARAVAFLLS-DESGLMTGSVIDFDQSV  254 (260)
T ss_pred             cCCcCHHHHHHHHHHHcC-hhhCCccCceEeECCcc
Confidence            446789999999999997 66789999998876554

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-34  Score=253.25  Aligned_cols=239  Identities=28%  Similarity=0.327  Sum_probs=193.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEec-CchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVR-NMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      +|++|||||++|||.+++++|+++|++|+++++ +.+..++..+.+...  +.++.++.+|++|.++++++++++.++++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQ--GGEALAVAADVADEADVLRLFEAVDRELG   79 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhC--CCcEEEEEeccCCHHHHHHHHHHHHHHhC
Confidence            579999999999999999999999999988874 445555555555443  45688999999999999999999999999


Q ss_pred             CeeEEEEcccCCCCC--C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCC
Q 021391          108 PLNILINNAGIMASP--F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFD  184 (313)
Q Consensus       108 ~id~lv~~ag~~~~~--~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  184 (313)
                      ++|++|||+|.....  . +.+.+++++++++|+.+++.+++++++.|.+..  ...+++||++||.++..+.+.     
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~~g~iv~~sS~~~~~~~~~-----  152 (248)
T PRK06123         80 RLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRH--GGRGGAIVNVSSMAARLGSPG-----  152 (248)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CCCCeEEEEECchhhcCCCCC-----
Confidence            999999999986432  2 667889999999999999999999999997621  022578999999988776551     


Q ss_pred             CCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc---chhHhHHHHHHHhhcCChHH
Q 021391          185 KINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN---GILRGFCNTVGKLVLKNIPQ  261 (313)
Q Consensus       185 ~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~e  261 (313)
                               .+..|+++|++++.++++++.++.++|  |+|++|+||.+.|++....   .+........+..+..+|+|
T Consensus       153 ---------~~~~Y~~sKaa~~~~~~~la~~~~~~~--i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d  221 (248)
T PRK06123        153 ---------EYIDYAASKGAIDTMTIGLAKEVAAEG--IRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMGRGGTAEE  221 (248)
T ss_pred             ---------CccchHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCcccCchhhccCCHHHHHHHHhcCCCCCCcCHHH
Confidence                     135699999999999999999999999  9999999999999975432   11112222334445678999


Q ss_pred             HHHHHHHHHccCCccCCCceeecCCcc
Q 021391          262 GAATTCYVALHPQVQGVSGEYFSDSNI  288 (313)
Q Consensus       262 va~~~~~l~~~~~~~~~tG~~~~~~~~  288 (313)
                      +++.++++++ +...+++|+++..+++
T Consensus       222 ~a~~~~~l~~-~~~~~~~g~~~~~~gg  247 (248)
T PRK06123        222 VARAILWLLS-DEASYTTGTFIDVSGG  247 (248)
T ss_pred             HHHHHHHHhC-ccccCccCCEEeecCC
Confidence            9999999998 6677899999987763

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=4.4e-34  Score=251.54  Aligned_cols=237  Identities=24%  Similarity=0.295  Sum_probs=197.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEec-CchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVR-NMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      ++++|+++||||++|||++++++|+++|++|+++.+ +.+..++..+++...  +.++.++.+|+++++++.++++++.+
T Consensus         3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (247)
T PRK12935          3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKE--GHDVYAVQADVSKVEDANRLVEEAVN   80 (247)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            467999999999999999999999999999987754 455566665666543  45789999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          105 QGRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      .++++|++|||+|......  +.+.+++++.+++|+.+++.++++++|.|.+     ...++||++||..+..+.+    
T Consensus        81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~~iv~~sS~~~~~~~~----  151 (247)
T PRK12935         81 HFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITE-----AEEGRIISISSIIGQAGGF----  151 (247)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-----cCCcEEEEEcchhhcCCCC----
Confidence            9999999999999865432  5677899999999999999999999999987     3468999999988876655    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHHHHHHhhcCChH
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCNTVGKLVLKNIP  260 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~  260 (313)
                                 ++..|+++|++++.++++++.++.+.|  |+++.++||+++|++.....  .........+......|+
T Consensus       152 -----------~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~e  218 (247)
T PRK12935        152 -----------GQTNYSAAKAGMLGFTKSLALELAKTN--VTVNAICPGFIDTEMVAEVPEEVRQKIVAKIPKKRFGQAD  218 (247)
T ss_pred             -----------CCcchHHHHHHHHHHHHHHHHHHHHcC--cEEEEEEeCCCcChhhhhccHHHHHHHHHhCCCCCCcCHH
Confidence                       677999999999999999999999888  99999999999998765432  112222233334568899


Q ss_pred             HHHHHHHHHHccCCccCCCceeecCCcc
Q 021391          261 QGAATTCYVALHPQVQGVSGEYFSDSNI  288 (313)
Q Consensus       261 eva~~~~~l~~~~~~~~~tG~~~~~~~~  288 (313)
                      |+++++++++. + ..+++|+.+..+++
T Consensus       219 dva~~~~~~~~-~-~~~~~g~~~~i~~g  244 (247)
T PRK12935        219 EIAKGVVYLCR-D-GAYITGQQLNINGG  244 (247)
T ss_pred             HHHHHHHHHcC-c-ccCccCCEEEeCCC
Confidence            99999999996 3 35899998887765

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-34  Score=253.84  Aligned_cols=239  Identities=26%  Similarity=0.249  Sum_probs=199.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      +++||++|||||+++||++++++|+++|++|++++|+++..++..+.+...  +.++.++++|+++.++++++++++.+.
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA--GGKAIGVAMDVTNEDAVNAGIDKVAER   81 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhc--CceEEEEECCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999998888887777554  457889999999999999999999988


Q ss_pred             CCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHH-HHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          106 GRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTM-KKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l-~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      ++++|+||||+|......  +.+.++++..+++|+.+++.+++.+++.+ .+     ...++||++||..+..+.+    
T Consensus        82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-----~~~~~iv~~ss~~~~~~~~----  152 (262)
T PRK13394         82 FGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKD-----DRGGVVIYMGSVHSHEASP----  152 (262)
T ss_pred             cCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhh-----cCCcEEEEEcchhhcCCCC----
Confidence            999999999999865422  56778899999999999999999999999 54     3468999999988776554    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--h-------hHhHHHH---
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--I-------LRGFCNT---  250 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~-------~~~~~~~---  250 (313)
                                 ....|+++|++++.+++.++.++.+.|  |++|+|+||++.|++....-  .       .......   
T Consensus       153 -----------~~~~y~~sk~a~~~~~~~la~~~~~~~--i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (262)
T PRK13394        153 -----------LKSAYVTAKHGLLGLARVLAKEGAKHN--VRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVML  219 (262)
T ss_pred             -----------CCcccHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHh
Confidence                       567899999999999999999999888  99999999999998754320  0       0011111   


Q ss_pred             --HHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          251 --VGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       251 --~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                        .+...+.+++|++++++++++ .....++|+++..+++.
T Consensus       220 ~~~~~~~~~~~~dva~a~~~l~~-~~~~~~~g~~~~~~~g~  259 (262)
T PRK13394        220 GKTVDGVFTTVEDVAQTVLFLSS-FPSAALTGQSFVVSHGW  259 (262)
T ss_pred             cCCCCCCCCCHHHHHHHHHHHcC-ccccCCcCCEEeeCCce
Confidence              122346799999999999997 55578999999887664

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=4.5e-34  Score=255.45  Aligned_cols=216  Identities=29%  Similarity=0.299  Sum_probs=180.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      +++|+++||||++|||++++++|+++|++|++++|+.+++++..    .    .++.++.+|++|+++++.+++++.+.+
T Consensus         1 ~~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~----~----~~~~~~~~Dv~~~~~~~~~~~~~~~~~   72 (273)
T PRK06182          1 MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA----S----LGVHPLSLDVTDEASIKAAVDTIIAEE   72 (273)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----h----CCCeEEEeeCCCHHHHHHHHHHHHHhc
Confidence            36899999999999999999999999999999999977654432    1    247889999999999999999999999


Q ss_pred             CCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCC
Q 021391          107 RPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFD  184 (313)
Q Consensus       107 g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  184 (313)
                      +++|+||||+|+....  .+.+.++++..+++|+.+++.+++.++|.|.+     ...++||++||..+..+.+      
T Consensus        73 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~-----~~~g~iv~isS~~~~~~~~------  141 (273)
T PRK06182         73 GRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRA-----QRSGRIINISSMGGKIYTP------  141 (273)
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHh-----cCCCEEEEEcchhhcCCCC------
Confidence            9999999999986542  26788999999999999999999999999987     3468999999988766555      


Q ss_pred             CCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-----------chh-------Hh
Q 021391          185 KINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-----------GIL-------RG  246 (313)
Q Consensus       185 ~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-----------~~~-------~~  246 (313)
                               ....|+++|+++++++++++.|+.+.|  |+||+|+||+++|++....           .+.       ..
T Consensus       142 ---------~~~~Y~~sKaa~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (273)
T PRK06182        142 ---------LGAWYHATKFALEGFSDALRLEVAPFG--IDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAAS  210 (273)
T ss_pred             ---------CccHhHHHHHHHHHHHHHHHHHhcccC--CEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHH
Confidence                     456799999999999999999999999  9999999999999975321           000       01


Q ss_pred             HHHHHHHhhcCChHHHHHHHHHHHcc
Q 021391          247 FCNTVGKLVLKNIPQGAATTCYVALH  272 (313)
Q Consensus       247 ~~~~~~~~~~~~~~eva~~~~~l~~~  272 (313)
                      +....+..+..+|+++|+.++++++.
T Consensus       211 ~~~~~~~~~~~~~~~vA~~i~~~~~~  236 (273)
T PRK06182        211 MRSTYGSGRLSDPSVIADAISKAVTA  236 (273)
T ss_pred             HHHhhccccCCCHHHHHHHHHHHHhC
Confidence            11122234567999999999999974

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-34  Score=253.81  Aligned_cols=234  Identities=24%  Similarity=0.227  Sum_probs=192.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      ++||+++||||++|||++++++|+++|++|++++|+....++..+++       ...++++|++++++++++++++.+.+
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV-------GGLFVPTDVTDEDAVNALFDTAAETY   77 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc-------CCcEEEeeCCCHHHHHHHHHHHHHHc
Confidence            68999999999999999999999999999999999877666554433       12578999999999999999999888


Q ss_pred             CCeeEEEEcccCCCC---CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          107 RPLNILINNAGIMAS---PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       107 g~id~lv~~ag~~~~---~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      +++|++|||+|...+   +. +.+.+.+++.+++|+.+++++++.++|.|.+     +..++||++||..+..+.+.   
T Consensus        78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-----~~~g~iv~~sS~~~~~g~~~---  149 (255)
T PRK06057         78 GSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVR-----QGKGSIINTASFVAVMGSAT---  149 (255)
T ss_pred             CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHH-----hCCcEEEEEcchhhccCCCC---
Confidence            999999999997543   12 5677889999999999999999999999987     34689999999877654321   


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccch--hH---hHHHHHHHhhcC
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI--LR---GFCNTVGKLVLK  257 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~--~~---~~~~~~~~~~~~  257 (313)
                                 +...|+++|++++.++++++.++.++|  |+|++|+||+++|++....-.  ..   ......+.....
T Consensus       150 -----------~~~~Y~~sKaal~~~~~~l~~~~~~~g--i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (255)
T PRK06057        150 -----------SQISYTASKGGVLAMSRELGVQFARQG--IRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPMGRFA  216 (255)
T ss_pred             -----------CCcchHHHHHHHHHHHHHHHHHHHhhC--cEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCCCCCCc
Confidence                       456799999999999999999999988  999999999999998653210  01   111122334568


Q ss_pred             ChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          258 NIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       258 ~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      +|+|+++.+.+|++ +...+++|+.+..|+..
T Consensus       217 ~~~~~a~~~~~l~~-~~~~~~~g~~~~~~~g~  247 (255)
T PRK06057        217 EPEEIAAAVAFLAS-DDASFITASTFLVDGGI  247 (255)
T ss_pred             CHHHHHHHHHHHhC-ccccCccCcEEEECCCe
Confidence            89999999999998 77899999998877653

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-34  Score=255.82  Aligned_cols=215  Identities=25%  Similarity=0.266  Sum_probs=186.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      |+++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++.      ++.++.+|++|+++++++++++.+
T Consensus         1 ~~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~   74 (273)
T PRK07825          1 DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG------LVVGGPLDVTDPASFAAFLDAVEA   74 (273)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc------cceEEEccCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999887776655441      477899999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          105 QGRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      .++++|++|||+|+.....  +.+.+.+++++++|+.+++.+++.++|.|.+     ++.++||++||.++..+.+    
T Consensus        75 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~-----~~~g~iv~isS~~~~~~~~----  145 (273)
T PRK07825         75 DLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVP-----RGRGHVVNVASLAGKIPVP----  145 (273)
T ss_pred             HcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CCCCEEEEEcCccccCCCC----
Confidence            9999999999999865432  6678889999999999999999999999988     4478999999999887766    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHH
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQG  262 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~ev  262 (313)
                                 +...|++||++++.++++++.++.+.|  |++++|+||+++|++.......       ......+++++
T Consensus       146 -----------~~~~Y~asKaa~~~~~~~l~~el~~~g--i~v~~v~Pg~v~t~~~~~~~~~-------~~~~~~~~~~v  205 (273)
T PRK07825        146 -----------GMATYCASKHAVVGFTDAARLELRGTG--VHVSVVLPSFVNTELIAGTGGA-------KGFKNVEPEDV  205 (273)
T ss_pred             -----------CCcchHHHHHHHHHHHHHHHHHhhccC--cEEEEEeCCcCcchhhcccccc-------cCCCCCCHHHH
Confidence                       678999999999999999999999999  9999999999999986543211       11235789999


Q ss_pred             HHHHHHHHccCC
Q 021391          263 AATTCYVALHPQ  274 (313)
Q Consensus       263 a~~~~~l~~~~~  274 (313)
                      |+.++.++.++.
T Consensus       206 a~~~~~~l~~~~  217 (273)
T PRK07825        206 AAAIVGTVAKPR  217 (273)
T ss_pred             HHHHHHHHhCCC
Confidence            999999998543

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=5.6e-34  Score=250.18  Aligned_cols=236  Identities=28%  Similarity=0.284  Sum_probs=195.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCch-hHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMA-AGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      |+++||||++|||+++|++|+++|++|++++|+.. ...+.......  .+.++.++.+|+++.++++++++++.+++++
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   80 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGF--TEDQVRLKELDVTDTEECAEALAEIEEEEGP   80 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhc--cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999999854 12222222211  2456889999999999999999999999999


Q ss_pred             eeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          109 LNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       109 id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                      +|++|||+|.....  .+.+.++++.++++|+.+++++++.++|.+.+     ...++||++||..+..+.+        
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~~iv~iss~~~~~~~~--------  147 (245)
T PRK12824         81 VDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCE-----QGYGRIINISSVNGLKGQF--------  147 (245)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-----hCCeEEEEECChhhccCCC--------
Confidence            99999999986432  36788999999999999999999999999987     3468999999998876655        


Q ss_pred             CCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccch--hHhHHHHHHHhhcCChHHHHH
Q 021391          187 NDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI--LRGFCNTVGKLVLKNIPQGAA  264 (313)
Q Consensus       187 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~eva~  264 (313)
                             +...|+++|++++.++++++.++.+.|  |++++++||+++|++......  ...+....+.....+++|+++
T Consensus       148 -------~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~  218 (245)
T PRK12824        148 -------GQTNYSAAKAGMIGFTKALASEGARYG--ITVNCIAPGYIATPMVEQMGPEVLQSIVNQIPMKRLGTPEEIAA  218 (245)
T ss_pred             -------CChHHHHHHHHHHHHHHHHHHHHHHhC--eEEEEEEEcccCCcchhhcCHHHHHHHHhcCCCCCCCCHHHHHH
Confidence                   677899999999999999999999988  999999999999997654321  112222333445678999999


Q ss_pred             HHHHHHccCCccCCCceeecCCcccC
Q 021391          265 TTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       265 ~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      .+++|++ +.+.+++|+.+..+++.+
T Consensus       219 ~~~~l~~-~~~~~~~G~~~~~~~g~~  243 (245)
T PRK12824        219 AVAFLVS-EAAGFITGETISINGGLY  243 (245)
T ss_pred             HHHHHcC-ccccCccCcEEEECCCee
Confidence            9999997 667889999999887764

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=7.8e-34  Score=248.80  Aligned_cols=235  Identities=25%  Similarity=0.278  Sum_probs=196.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEec-CchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVR-NMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      |++|||||++|||++++++|+++|++|++++| +.+..++..+++...  +.++.++.+|++++++++++++++.+.+++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGAL--GFDFRVVEGDVSSFESCKAAVAKVEAELGP   78 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            78999999999999999999999999999988 655555555544433  457889999999999999999999999999


Q ss_pred             eeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          109 LNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       109 id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                      +|+||||+|.....  .+.+.++++..+++|+.+++.+++.++|.|.+     .+.++||++||..+..+.+        
T Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~~~iv~iss~~~~~~~~--------  145 (242)
T TIGR01829        79 IDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRE-----RGWGRIINISSVNGQKGQF--------  145 (242)
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-----cCCcEEEEEcchhhcCCCC--------
Confidence            99999999976542  26677899999999999999999999999987     3467999999988776655        


Q ss_pred             CCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHHHHHHhhcCChHHHHH
Q 021391          187 NDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCNTVGKLVLKNIPQGAA  264 (313)
Q Consensus       187 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~eva~  264 (313)
                             ++..|+++|++++.++++++.++...|  |++|+++||+++|++.....  ....+....+.....+|+++++
T Consensus       146 -------~~~~y~~sk~a~~~~~~~la~~~~~~~--i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  216 (242)
T TIGR01829       146 -------GQTNYSAAKAGMIGFTKALAQEGATKG--VTVNTISPGYIATDMVMAMREDVLNSIVAQIPVGRLGRPEEIAA  216 (242)
T ss_pred             -------CcchhHHHHHHHHHHHHHHHHHhhhhC--eEEEEEeeCCCcCccccccchHHHHHHHhcCCCCCCcCHHHHHH
Confidence                   677899999999999999999999888  99999999999999865431  1222222334455688999999


Q ss_pred             HHHHHHccCCccCCCceeecCCccc
Q 021391          265 TTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       265 ~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      .+.||++ +...+++|+++..+|+.
T Consensus       217 ~~~~l~~-~~~~~~~G~~~~~~gg~  240 (242)
T TIGR01829       217 AVAFLAS-EEAGYITGATLSINGGL  240 (242)
T ss_pred             HHHHHcC-chhcCccCCEEEecCCc
Confidence            9999997 66788999999987764

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=5e-34  Score=283.58  Aligned_cols=246  Identities=24%  Similarity=0.290  Sum_probs=204.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      ..+++||++|||||++|||++++++|+++|++|++++|+.+.++...+++...+...++..+++|++|++++.++++++.
T Consensus       409 ~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~  488 (676)
T TIGR02632       409 EKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVA  488 (676)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            34588999999999999999999999999999999999988888777777655444568889999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCC-CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          104 SQGRPLNILINNAGIMAS-PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~-~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      +.+|++|++|||||.... +. +.+.++|+..+++|+.+++.+++.+++.|.+.    ..+++||++||..+..+.+   
T Consensus       489 ~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~----~~~g~IV~iSS~~a~~~~~---  561 (676)
T TIGR02632       489 LAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQ----GLGGNIVFIASKNAVYAGK---  561 (676)
T ss_pred             HhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCCEEEEEeChhhcCCCC---
Confidence            999999999999997653 22 67788999999999999999999999999873    2357999999998877655   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCccccc--CCcccc-----------ch---hH
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVT--NLFRYN-----------GI---LR  245 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t--~~~~~~-----------~~---~~  245 (313)
                                  +..+|++||++++.++++++.++++.|  ||||+|+||.+.|  +++...           ..   ..
T Consensus       562 ------------~~~aY~aSKaA~~~l~r~lA~el~~~g--IrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~  627 (676)
T TIGR02632       562 ------------NASAYSAAKAAEAHLARCLAAEGGTYG--IRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEE  627 (676)
T ss_pred             ------------CCHHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEECCceecCcccccccchhhhhhcccCChHHHHH
Confidence                        678999999999999999999999999  9999999999864  332211           00   01


Q ss_pred             hHHHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          246 GFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       246 ~~~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      .+....+.++..+|+|+|++++||++ +...++||+++.+||+...
T Consensus       628 ~~~~r~~l~r~v~peDVA~av~~L~s-~~~~~~TG~~i~vDGG~~~  672 (676)
T TIGR02632       628 HYAKRTLLKRHIFPADIAEAVFFLAS-SKSEKTTGCIITVDGGVPA  672 (676)
T ss_pred             HHHhcCCcCCCcCHHHHHHHHHHHhC-CcccCCcCcEEEECCCchh
Confidence            11222233456789999999999997 6678999999998876543

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=3.1e-34  Score=262.04  Aligned_cols=213  Identities=21%  Similarity=0.259  Sum_probs=175.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      +..|++++|||||+|||+++|++|+++|++|++++|+.+++++..+++...+++.++..+.+|+++  ++.+.++++.+.
T Consensus        50 ~~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~  127 (320)
T PLN02780         50 KKYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKET  127 (320)
T ss_pred             cccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHH
Confidence            356899999999999999999999999999999999999999988888776655678889999995  223333333333


Q ss_pred             CC--CeeEEEEcccCCCC---C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccc-c-c
Q 021391          106 GR--PLNILINNAGIMAS---P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRF-A-Y  177 (313)
Q Consensus       106 ~g--~id~lv~~ag~~~~---~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~-~-~  177 (313)
                      .+  ++|++|||||+...   + .+.+.+++++++++|+.+++.+++.++|.|.+     ++.|+||++||.++.. + .
T Consensus       128 ~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~-----~~~g~IV~iSS~a~~~~~~~  202 (320)
T PLN02780        128 IEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLK-----RKKGAIINIGSGAAIVIPSD  202 (320)
T ss_pred             hcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHh-----cCCcEEEEEechhhccCCCC
Confidence            33  47799999998642   2 26788899999999999999999999999987     4578999999998864 2 3


Q ss_pred             cCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcC
Q 021391          178 SEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLK  257 (313)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  257 (313)
                      |               ....|++||+++++++++|+.|+.++|  |+|++|+||+++|++.....         ......
T Consensus       203 p---------------~~~~Y~aSKaal~~~~~~L~~El~~~g--I~V~~v~PG~v~T~~~~~~~---------~~~~~~  256 (320)
T PLN02780        203 P---------------LYAVYAATKAYIDQFSRCLYVEYKKSG--IDVQCQVPLYVATKMASIRR---------SSFLVP  256 (320)
T ss_pred             c---------------cchHHHHHHHHHHHHHHHHHHHHhccC--eEEEEEeeCceecCcccccC---------CCCCCC
Confidence            4               578899999999999999999999999  99999999999999865211         011135


Q ss_pred             ChHHHHHHHHHHHc
Q 021391          258 NIPQGAATTCYVAL  271 (313)
Q Consensus       258 ~~~eva~~~~~l~~  271 (313)
                      +|+++|+.++..+.
T Consensus       257 ~p~~~A~~~~~~~~  270 (320)
T PLN02780        257 SSDGYARAALRWVG  270 (320)
T ss_pred             CHHHHHHHHHHHhC
Confidence            89999999999885

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-33  Score=255.03  Aligned_cols=219  Identities=24%  Similarity=0.243  Sum_probs=185.1

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      +.+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|.+++.++++++
T Consensus        34 ~~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~  111 (293)
T PRK05866         34 QPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRA--GGDAMAVPCDLSDLDAVDALVADV  111 (293)
T ss_pred             CCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHH
Confidence            567789999999999999999999999999999999999998888877777554  456889999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCCCC--c--cCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccc-c
Q 021391          103 NSQGRPLNILINNAGIMASPF--M--LSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFA-Y  177 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~~--~--~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~-~  177 (313)
                      .+.++++|++|||||......  +  .+.++++.++++|+.+++.++++++|.|.+     ...++||++||.++... .
T Consensus       112 ~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-----~~~g~iv~isS~~~~~~~~  186 (293)
T PRK05866        112 EKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLE-----RGDGHIINVATWGVLSEAS  186 (293)
T ss_pred             HHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCcEEEEECChhhcCCCC
Confidence            999999999999999764422  2  134678899999999999999999999987     44689999999765432 2


Q ss_pred             cCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcC
Q 021391          178 SEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLK  257 (313)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  257 (313)
                      +               ....|+++|+|+++++++++.|+.++|  |+|++|+||+++|++........       .....
T Consensus       187 p---------------~~~~Y~asKaal~~l~~~la~e~~~~g--I~v~~v~pg~v~T~~~~~~~~~~-------~~~~~  242 (293)
T PRK05866        187 P---------------LFSVYNASKAALSAVSRVIETEWGDRG--VHSTTLYYPLVATPMIAPTKAYD-------GLPAL  242 (293)
T ss_pred             C---------------CcchHHHHHHHHHHHHHHHHHHhcccC--cEEEEEEcCcccCcccccccccc-------CCCCC
Confidence            3               567899999999999999999999999  99999999999999875431110       11246


Q ss_pred             ChHHHHHHHHHHHcc
Q 021391          258 NIPQGAATTCYVALH  272 (313)
Q Consensus       258 ~~~eva~~~~~l~~~  272 (313)
                      +|+++|+.++..+..
T Consensus       243 ~pe~vA~~~~~~~~~  257 (293)
T PRK05866        243 TADEAAEWMVTAART  257 (293)
T ss_pred             CHHHHHHHHHHHHhc
Confidence            899999999998874

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-33  Score=249.36  Aligned_cols=240  Identities=20%  Similarity=0.202  Sum_probs=192.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEec-CchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVR-NMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      ..+|++|||||++|||++++++|+++|++|+++++ +.+..+.+.+++...  +.++.++.+|++|.+++.++++++.+.
T Consensus         7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~~   84 (258)
T PRK09134          7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL--GRRAVALQADLADEAEVRALVARASAA   84 (258)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46799999999999999999999999999988776 445556666665543  457889999999999999999999998


Q ss_pred             CCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          106 GRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      ++++|+||||||.....  .+.+.+++++++++|+.+++.+++++.+.+.+     ...++||+++|..+..+.|     
T Consensus        85 ~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~~iv~~~s~~~~~~~p-----  154 (258)
T PRK09134         85 LGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPA-----DARGLVVNMIDQRVWNLNP-----  154 (258)
T ss_pred             cCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-----cCCceEEEECchhhcCCCC-----
Confidence            99999999999976542  26778899999999999999999999999987     3468999999876655444     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHHH
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGA  263 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~eva  263 (313)
                                .+..|+++|++++.++++++.++.+ +  |+||+|+||++.|+...............+.....+++|+|
T Consensus       155 ----------~~~~Y~~sK~a~~~~~~~la~~~~~-~--i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~d~a  221 (258)
T PRK09134        155 ----------DFLSYTLSKAALWTATRTLAQALAP-R--IRVNAIGPGPTLPSGRQSPEDFARQHAATPLGRGSTPEEIA  221 (258)
T ss_pred             ----------CchHHHHHHHHHHHHHHHHHHHhcC-C--cEEEEeecccccCCcccChHHHHHHHhcCCCCCCcCHHHHH
Confidence                      4568999999999999999999975 3  99999999999887533221111222222334567899999


Q ss_pred             HHHHHHHccCCccCCCceeecCCcccCCCcc
Q 021391          264 ATTCYVALHPQVQGVSGEYFSDSNIYKPNSQ  294 (313)
Q Consensus       264 ~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~~  294 (313)
                      +++++++++   .+++|+.+..+++......
T Consensus       222 ~~~~~~~~~---~~~~g~~~~i~gg~~~~~~  249 (258)
T PRK09134        222 AAVRYLLDA---PSVTGQMIAVDGGQHLAWL  249 (258)
T ss_pred             HHHHHHhcC---CCcCCCEEEECCCeecccc
Confidence            999999973   4689998887766544433

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.5e-33  Score=248.38  Aligned_cols=238  Identities=22%  Similarity=0.210  Sum_probs=196.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      |+++|+++|||||++|||+++++.|+++|++|++++|+.++.++..+++...  +.++.++++|+++.++++++++.+.+
T Consensus         1 ~~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (253)
T PRK08217          1 MDLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGAL--GTEVRGYAANVTDEEDVEATFAQIAE   78 (253)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999988887777776554  45788999999999999999999988


Q ss_pred             cCCCeeEEEEcccCCCCC-----------CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          105 QGRPLNILINNAGIMASP-----------FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~-----------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                      .++++|++|||+|.....           .+.+.+.++.++++|+.+++.+++.+.|.|.+.    ..++.||++||...
T Consensus        79 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~----~~~~~iv~~ss~~~  154 (253)
T PRK08217         79 DFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIES----GSKGVIINISSIAR  154 (253)
T ss_pred             HcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc----CCCeEEEEEccccc
Confidence            888999999999975421           244667889999999999999999999999873    23578999988643


Q ss_pred             cccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHHHH
Q 021391          174 RFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCNTV  251 (313)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~~~  251 (313)
                       .+.+               +...|+++|+|++.++++++.++.++|  |++++++||+++|++.....  ....+....
T Consensus       155 -~~~~---------------~~~~Y~~sK~a~~~l~~~la~~~~~~~--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~  216 (253)
T PRK08217        155 -AGNM---------------GQTNYSASKAGVAAMTVTWAKELARYG--IRVAAIAPGVIETEMTAAMKPEALERLEKMI  216 (253)
T ss_pred             -cCCC---------------CCchhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEeeCCCcCccccccCHHHHHHHHhcC
Confidence             3433               567899999999999999999999888  99999999999999865431  112222233


Q ss_pred             HHhhcCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          252 GKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       252 ~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      +.....+++|+|+.+.+++.   ..+++|+.+..+++.
T Consensus       217 ~~~~~~~~~~~a~~~~~l~~---~~~~~g~~~~~~gg~  251 (253)
T PRK08217        217 PVGRLGEPEEIAHTVRFIIE---NDYVTGRVLEIDGGL  251 (253)
T ss_pred             CcCCCcCHHHHHHHHHHHHc---CCCcCCcEEEeCCCc
Confidence            34456789999999999996   257899999988765

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=1e-33  Score=250.41  Aligned_cols=239  Identities=27%  Similarity=0.274  Sum_probs=201.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      +++|++|||||+++||++++++|+++|++|++++|+.+..+...+++...  +.++.++.+|+++++++..+++++.+.+
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   79 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA--GGKAIGVAMDVTDEEAINAGIDYAVETF   79 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999998888777776553  5678999999999999999999999999


Q ss_pred             CCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCC
Q 021391          107 RPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFD  184 (313)
Q Consensus       107 g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  184 (313)
                      +++|++|||+|.....  .+.+.++++..+++|+.+++.+++.+++.|.+     ...++||++||..+..+.+      
T Consensus        80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~~iv~iss~~~~~~~~------  148 (258)
T PRK12429         80 GGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKA-----QGGGRIINMASVHGLVGSA------  148 (258)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHh-----cCCeEEEEEcchhhccCCC------
Confidence            9999999999976543  26677889999999999999999999999988     4468999999998887665      


Q ss_pred             CCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----------chhHh----HHHH
Q 021391          185 KINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----------GILRG----FCNT  250 (313)
Q Consensus       185 ~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----------~~~~~----~~~~  250 (313)
                               +...|+++|++++.+++.++.++.+.|  |++++++||++.|++....          .....    +...
T Consensus       149 ---------~~~~y~~~k~a~~~~~~~l~~~~~~~~--i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (258)
T PRK12429        149 ---------GKAAYVSAKHGLIGLTKVVALEGATHG--VTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPL  217 (258)
T ss_pred             ---------CcchhHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhcc
Confidence                     678999999999999999999999888  9999999999999875421          00110    1111


Q ss_pred             HHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          251 VGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       251 ~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      .+.....+++|+|+.+++++. +....++|+++..+++.+
T Consensus       218 ~~~~~~~~~~d~a~~~~~l~~-~~~~~~~g~~~~~~~g~~  256 (258)
T PRK12429        218 VPQKRFTTVEEIADYALFLAS-FAAKGVTGQAWVVDGGWT  256 (258)
T ss_pred             CCccccCCHHHHHHHHHHHcC-ccccCccCCeEEeCCCEe
Confidence            122456789999999999997 566788999998876643

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-33  Score=247.41  Aligned_cols=230  Identities=26%  Similarity=0.275  Sum_probs=191.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      ++|+++||||++|||++++++|+++|++|++++|+.++.++..+++...  +.++.++.+|+++++++.++++++.++++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST--GVKAAAYSIDLSNPEAIAPGIAELLEQFG   82 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999999988877777666543  45788999999999999999999999999


Q ss_pred             CeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCC
Q 021391          108 PLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDK  185 (313)
Q Consensus       108 ~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  185 (313)
                      ++|++|||+|.....  .+.+.++++.++++|+.+++.+++.+.|.|.+     +..++||++||..+..+.+       
T Consensus        83 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~~~iv~isS~~~~~~~~-------  150 (241)
T PRK07454         83 CPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRA-----RGGGLIINVSSIAARNAFP-------  150 (241)
T ss_pred             CCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHh-----cCCcEEEEEccHHhCcCCC-------
Confidence            999999999976542  25677899999999999999999999999987     3468999999998876655       


Q ss_pred             CCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHHHHH
Q 021391          186 INDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGAAT  265 (313)
Q Consensus       186 ~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~eva~~  265 (313)
                              ++..|+++|++++.++++++.++.+.|  |++|+|.||+++|++.........    .......+++++|+.
T Consensus       151 --------~~~~Y~~sK~~~~~~~~~~a~e~~~~g--i~v~~i~pg~i~t~~~~~~~~~~~----~~~~~~~~~~~va~~  216 (241)
T PRK07454        151 --------QWGAYCVSKAALAAFTKCLAEEERSHG--IRVCTITLGAVNTPLWDTETVQAD----FDRSAMLSPEQVAQT  216 (241)
T ss_pred             --------CccHHHHHHHHHHHHHHHHHHHhhhhC--CEEEEEecCcccCCcccccccccc----cccccCCCHHHHHHH
Confidence                    667899999999999999999999999  999999999999998653211111    112345789999999


Q ss_pred             HHHHHccCCccCCCceeecC
Q 021391          266 TCYVALHPQVQGVSGEYFSD  285 (313)
Q Consensus       266 ~~~l~~~~~~~~~tG~~~~~  285 (313)
                      ++++++.+....+.+..+..
T Consensus       217 ~~~l~~~~~~~~~~~~~~~~  236 (241)
T PRK07454        217 ILHLAQLPPSAVIEDLTLMP  236 (241)
T ss_pred             HHHHHcCCccceeeeEEeec
Confidence            99999855444444334433

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-33  Score=251.67  Aligned_cols=230  Identities=23%  Similarity=0.252  Sum_probs=190.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .+|++|||||++|||++++++|+++|++|++++|+.+.+++..+.+     +.++.++++|++|+++++++++++.+.++
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY-----GDRLLPLALDVTDRAAVFAAVETAVEHFG   76 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-----cCCeeEEEccCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999999999999999999987766544332     34678899999999999999999999999


Q ss_pred             CeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCC
Q 021391          108 PLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDK  185 (313)
Q Consensus       108 ~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  185 (313)
                      ++|++|||+|......  +.+.+++++++++|+.+++.+++.++|.|.+     ...++||++||.++..+.+       
T Consensus        77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~~iv~vsS~~~~~~~~-------  144 (275)
T PRK08263         77 RLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLRE-----QRSGHIIQISSIGGISAFP-------  144 (275)
T ss_pred             CCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-----cCCCEEEEEcChhhcCCCC-------
Confidence            9999999999875422  6788999999999999999999999999987     3467999999998887766       


Q ss_pred             CCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-------c----hhHhHHHHHHHh
Q 021391          186 INDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-------G----ILRGFCNTVGKL  254 (313)
Q Consensus       186 ~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-------~----~~~~~~~~~~~~  254 (313)
                              ....|+++|++++.+++.++.++.+.|  |+|++|+||+++|++....       .    .........+..
T Consensus       145 --------~~~~Y~~sKaa~~~~~~~la~e~~~~g--i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (275)
T PRK08263        145 --------MSGIYHASKWALEGMSEALAQEVAEFG--IKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSER  214 (275)
T ss_pred             --------CccHHHHHHHHHHHHHHHHHHHhhhhC--cEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhc
Confidence                    567899999999999999999999999  9999999999999987421       0    111122233444


Q ss_pred             hc-CChHHHHHHHHHHHccCCccCCCceeecCCc
Q 021391          255 VL-KNIPQGAATTCYVALHPQVQGVSGEYFSDSN  287 (313)
Q Consensus       255 ~~-~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~  287 (313)
                      .. .+|+++|+.++++++.+   ...++++...+
T Consensus       215 ~~~~~p~dva~~~~~l~~~~---~~~~~~~~~~~  245 (275)
T PRK08263        215 SVDGDPEAAAEALLKLVDAE---NPPLRLFLGSG  245 (275)
T ss_pred             cCCCCHHHHHHHHHHHHcCC---CCCeEEEeCch
Confidence            45 78999999999999843   33466666544

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3e-33  Score=245.71  Aligned_cols=240  Identities=30%  Similarity=0.332  Sum_probs=202.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEE-ecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMA-VRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      |++.+|++|||||+++||++++++|+++|++|+++ +|+.+..+...+.+...  +.++.++.+|+++++++.++++++.
T Consensus         1 ~~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   78 (247)
T PRK05565          1 MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE--GGDAIAVKADVSSEEDVENLVEQIV   78 (247)
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHH
Confidence            45788999999999999999999999999999999 99888777776666543  4578999999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          104 SQGRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      +.++++|++||++|......  +.+.+++++.+++|+.+++.+++.+.+.+.+     ...+++|++||..+..+.+   
T Consensus        79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~~~v~~sS~~~~~~~~---  150 (247)
T PRK05565         79 EKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIK-----RKSGVIVNISSIWGLIGAS---  150 (247)
T ss_pred             HHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-----cCCcEEEEECCHhhccCCC---
Confidence            98999999999999874322  6778899999999999999999999999987     4467899999988877655   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchh--HhHHHHHHHhhcCCh
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGIL--RGFCNTVGKLVLKNI  259 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~  259 (313)
                                  ....|+++|++++.++++++.++...|  |++++|+||.++|++.+.....  ..+....+.....++
T Consensus       151 ------------~~~~y~~sK~a~~~~~~~~~~~~~~~g--i~~~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (247)
T PRK05565        151 ------------CEVLYSASKGAVNAFTKALAKELAPSG--IRVNAVAPGAIDTEMWSSFSEEDKEGLAEEIPLGRLGKP  216 (247)
T ss_pred             ------------CccHHHHHHHHHHHHHHHHHHHHHHcC--eEEEEEEECCccCccccccChHHHHHHHhcCCCCCCCCH
Confidence                        567899999999999999999999888  9999999999999887654211  111112233345689


Q ss_pred             HHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          260 PQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       260 ~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      +++++.++++++ +....++|+++..++..
T Consensus       217 ~~va~~~~~l~~-~~~~~~~g~~~~~~~~~  245 (247)
T PRK05565        217 EEIAKVVLFLAS-DDASYITGQIITVDGGW  245 (247)
T ss_pred             HHHHHHHHHHcC-CccCCccCcEEEecCCc
Confidence            999999999998 67789999999988764

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.4e-33  Score=247.99  Aligned_cols=244  Identities=22%  Similarity=0.201  Sum_probs=196.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc-hhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM-AAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .|++|||||++|||++++++|+++|++|++++|+. +..+...+.+...  +.++.++.+|+++++++.++++++.+.++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL--GVEVIFFPADVADLSAHEAMLDAAQAAWG   79 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            48999999999999999999999999999999864 3444444544433  45789999999999999999999999999


Q ss_pred             CeeEEEEcccCCCC---CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccC-CCCCeEEEECCccccccccCCCC
Q 021391          108 PLNILINNAGIMAS---PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKS-SREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       108 ~id~lv~~ag~~~~---~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~-~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      ++|++|||+|....   +. +.+.+++++.+++|+.+++.+++++.+.|.+..... ...++||++||..+..+.+    
T Consensus        80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----  155 (256)
T PRK12745         80 RIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSP----  155 (256)
T ss_pred             CCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCC----
Confidence            99999999997543   12 567789999999999999999999999998742100 0145799999998877655    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHH-HHHHhhcCCh
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCN-TVGKLVLKNI  259 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~-~~~~~~~~~~  259 (313)
                                 +...|+++|++++.++++++.++.++|  |+|++|+||++.|++.....  +...... ..+.....++
T Consensus       156 -----------~~~~Y~~sK~a~~~~~~~l~~~~~~~g--i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (256)
T PRK12745        156 -----------NRGEYCISKAGLSMAAQLFAARLAEEG--IGVYEVRPGLIKTDMTAPVTAKYDALIAKGLVPMPRWGEP  222 (256)
T ss_pred             -----------CCcccHHHHHHHHHHHHHHHHHHHHhC--CEEEEEecCCCcCccccccchhHHhhhhhcCCCcCCCcCH
Confidence                       567899999999999999999999989  99999999999998765321  1111111 1233346689


Q ss_pred             HHHHHHHHHHHccCCccCCCceeecCCcccCCC
Q 021391          260 PQGAATTCYVALHPQVQGVSGEYFSDSNIYKPN  292 (313)
Q Consensus       260 ~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~  292 (313)
                      +|+++++.++++ +...+++|+++..+++...+
T Consensus       223 ~d~a~~i~~l~~-~~~~~~~G~~~~i~gg~~~~  254 (256)
T PRK12745        223 EDVARAVAALAS-GDLPYSTGQAIHVDGGLSIP  254 (256)
T ss_pred             HHHHHHHHHHhC-CcccccCCCEEEECCCeecc
Confidence            999999999997 67788999999988876543

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-33  Score=247.57  Aligned_cols=236  Identities=29%  Similarity=0.326  Sum_probs=193.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEE-ecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMA-VRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      ++++|+++||||++|||+++|++|+++|++|++. .|+.++.++..+++...  +.+++++.+|++|++++.++++++.+
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~~   80 (254)
T PRK12746          3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESN--GGKAFLIEADLNSIDGVKKLVEQLKN   80 (254)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCcCCHHHHHHHHHHHHH
Confidence            3678999999999999999999999999998775 68877777666666443  45688999999999999999999988


Q ss_pred             cC------CCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccc
Q 021391          105 QG------RPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFA  176 (313)
Q Consensus       105 ~~------g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~  176 (313)
                      ++      +++|++|||+|......  +.+.+.++..+++|+.+++++++.+.+.|.+       .+++|++||..+..+
T Consensus        81 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~~~~v~~sS~~~~~~  153 (254)
T PRK12746         81 ELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA-------EGRVINISSAEVRLG  153 (254)
T ss_pred             HhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc-------CCEEEEECCHHhcCC
Confidence            76      47999999999765432  5678889999999999999999999999865       469999999888766


Q ss_pred             ccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhH---h-HHHHHH
Q 021391          177 YSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILR---G-FCNTVG  252 (313)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~---~-~~~~~~  252 (313)
                      .+               +...|+++|++++.++++++.++.++|  |+|++++||+++|++........   . ......
T Consensus       154 ~~---------------~~~~Y~~sK~a~~~~~~~~~~~~~~~~--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~  216 (254)
T PRK12746        154 FT---------------GSIAYGLSKGALNTMTLPLAKHLGERG--ITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSV  216 (254)
T ss_pred             CC---------------CCcchHhhHHHHHHHHHHHHHHHhhcC--cEEEEEEECCccCcchhhhccChhHHHHHHhcCC
Confidence            55               677899999999999999999999988  99999999999999865421111   1 111222


Q ss_pred             HhhcCChHHHHHHHHHHHccCCccCCCceeecCCcc
Q 021391          253 KLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNI  288 (313)
Q Consensus       253 ~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~  288 (313)
                      ......++|+|+.+.++++ +.+.+++|+.+..++.
T Consensus       217 ~~~~~~~~dva~~~~~l~~-~~~~~~~g~~~~i~~~  251 (254)
T PRK12746        217 FGRIGQVEDIADAVAFLAS-SDSRWVTGQIIDVSGG  251 (254)
T ss_pred             cCCCCCHHHHHHHHHHHcC-cccCCcCCCEEEeCCC
Confidence            2345689999999999987 6667899998887755

>PRK12827 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4e-33  Score=245.19  Aligned_cols=238  Identities=27%  Similarity=0.280  Sum_probs=194.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecC----chhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHH
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRN----MAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~----~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      ++++|+++||||++|||+++|+.|+++|++|++++|.    .+..++..+++...  +.++.++.+|+++.+++++++++
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~   80 (249)
T PRK12827          3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAA--GGKALGLAFDVRDFAATRAALDA   80 (249)
T ss_pred             CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHH
Confidence            4678999999999999999999999999999997764    33344444444332  45788999999999999999999


Q ss_pred             HhhcCCCeeEEEEcccCCCC-C-CccCccchhhhhhhhhhHHHHHHHHHH-HHHHHhhccCCCCCeEEEECCcccccccc
Q 021391          102 YNSQGRPLNILINNAGIMAS-P-FMLSKDNIELQFATNHLGHFLLTHLLL-DTMKKTAQKSSREGRIVNVSSEAHRFAYS  178 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~~~-~-~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~l~~~~~~~~~~g~iv~isS~~~~~~~~  178 (313)
                      +.+.++++|++|||+|.... + .+.+.++++..+++|+.+++.+++++. +.+.+     ...+++|++||..+..+.+
T Consensus        81 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~~iv~~sS~~~~~~~~  155 (249)
T PRK12827         81 GVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRA-----RRGGRIVNIASVAGVRGNR  155 (249)
T ss_pred             HHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc-----CCCeEEEEECCchhcCCCC
Confidence            99988999999999998763 2 266788899999999999999999999 55554     3357999999998877655


Q ss_pred             CCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCC
Q 021391          179 EGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKN  258 (313)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  258 (313)
                                     +...|+.+|++++.++++++.++.+.|  |++++|+||+++|++..............+.....+
T Consensus       156 ---------------~~~~y~~sK~a~~~~~~~l~~~~~~~~--i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  218 (249)
T PRK12827        156 ---------------GQVNYAASKAGLIGLTKTLANELAPRG--ITVNAVAPGAINTPMADNAAPTEHLLNPVPVQRLGE  218 (249)
T ss_pred             ---------------CCchhHHHHHHHHHHHHHHHHHhhhhC--cEEEEEEECCcCCCcccccchHHHHHhhCCCcCCcC
Confidence                           677899999999999999999999888  999999999999998665432222333333344568


Q ss_pred             hHHHHHHHHHHHccCCccCCCceeecCCcc
Q 021391          259 IPQGAATTCYVALHPQVQGVSGEYFSDSNI  288 (313)
Q Consensus       259 ~~eva~~~~~l~~~~~~~~~tG~~~~~~~~  288 (313)
                      ++++|+.+++++. +...+++|+++..+++
T Consensus       219 ~~~va~~~~~l~~-~~~~~~~g~~~~~~~g  247 (249)
T PRK12827        219 PDEVAALVAFLVS-DAASYVTGQVIPVDGG  247 (249)
T ss_pred             HHHHHHHHHHHcC-cccCCccCcEEEeCCC
Confidence            9999999999997 6678999999887654

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.2e-33  Score=275.70  Aligned_cols=227  Identities=26%  Similarity=0.263  Sum_probs=192.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      ...+.++++|||||++|||+++|++|+++|++|++++|+.++++++.+++...  +.++.++.+|++|++++.++++++.
T Consensus       310 ~~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~  387 (582)
T PRK05855        310 RGPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAA--GAVAHAYRVDVSDADAMEAFAEWVR  387 (582)
T ss_pred             cccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            34567899999999999999999999999999999999998888888777654  4578999999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          104 SQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      +.+|++|+||||||+....  .+.+.+++++++++|+.|++++++++.|.|.+.    +.+|+||++||.++..+.+   
T Consensus       388 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~----~~~g~iv~~sS~~~~~~~~---  460 (582)
T PRK05855        388 AEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVER----GTGGHIVNVASAAAYAPSR---  460 (582)
T ss_pred             HhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc----CCCcEEEEECChhhccCCC---
Confidence            9999999999999986543  267889999999999999999999999999873    2358999999999887766   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchh-------H---hHHHHH
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGIL-------R---GFCNTV  251 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~-------~---~~~~~~  251 (313)
                                  +...|++||+|+++++++++.|+.++|  |+||+|+||+++|++.....+.       .   ......
T Consensus       461 ------------~~~~Y~~sKaa~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  526 (582)
T PRK05855        461 ------------SLPAYATSKAAVLMLSECLRAELAAAG--IGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKL  526 (582)
T ss_pred             ------------CCcHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhh
Confidence                        678999999999999999999999999  9999999999999987653211       0   011111


Q ss_pred             HHhhcCChHHHHHHHHHHHccC
Q 021391          252 GKLVLKNIPQGAATTCYVALHP  273 (313)
Q Consensus       252 ~~~~~~~~~eva~~~~~l~~~~  273 (313)
                      ......+|+++|+.+++.+..+
T Consensus       527 ~~~~~~~p~~va~~~~~~~~~~  548 (582)
T PRK05855        527 YQRRGYGPEKVAKAIVDAVKRN  548 (582)
T ss_pred             ccccCCCHHHHHHHHHHHHHcC
Confidence            1223458999999999999844

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=100.00  E-value=1.2e-33  Score=235.69  Aligned_cols=243  Identities=16%  Similarity=0.158  Sum_probs=212.3

Q ss_pred             CCCCCCEEEEeCCC--CchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           25 IDGTGLTAIVTGAS--SGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        25 ~~~~gk~~lItGas--~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      ..|+||++||+|-.  +.|++.||+.|.++|+.+.+++.++ ++++..+++.+..+  ....++||+++.++++++++++
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~--s~~v~~cDV~~d~~i~~~f~~i   78 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELG--SDLVLPCDVTNDESIDALFATI   78 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhcc--CCeEEecCCCCHHHHHHHHHHH
Confidence            56899999999977  7999999999999999999999987 67777777776632  3678999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCC------CCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccc
Q 021391          103 NSQGRPLNILINNAGIMAS------PFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFA  176 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~  176 (313)
                      .+++|++|.|||+.++.+.      ..+.+.|+|...+++..++...+.+++.|.|..       +|+||.+|-..+...
T Consensus        79 ~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~-------ggSiltLtYlgs~r~  151 (259)
T COG0623          79 KKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN-------GGSILTLTYLGSERV  151 (259)
T ss_pred             HHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC-------CCcEEEEEeccceee
Confidence            9999999999999998864      128899999999999999999999999999977       899999999888887


Q ss_pred             ccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHh----HHHHHH
Q 021391          177 YSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRG----FCNTVG  252 (313)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~----~~~~~~  252 (313)
                      .|               .+...+.+|+++|.-+|.||.+++++|  ||||+|+.||++|=........+.    .....|
T Consensus       152 vP---------------nYNvMGvAKAaLEasvRyLA~dlG~~g--IRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aP  214 (259)
T COG0623         152 VP---------------NYNVMGVAKAALEASVRYLAADLGKEG--IRVNAISAGPIRTLAASGIGDFRKMLKENEANAP  214 (259)
T ss_pred             cC---------------CCchhHHHHHHHHHHHHHHHHHhCccC--eEEeeecccchHHHHhhccccHHHHHHHHHhhCC
Confidence            77               667889999999999999999999999  999999999999866555432333    334456


Q ss_pred             HhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCCccC
Q 021391          253 KLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQG  295 (313)
Q Consensus       253 ~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~~~  295 (313)
                      .++..+.|||....+||+| |.++.+||+++.+|.++......
T Consensus       215 l~r~vt~eeVG~tA~fLlS-dLssgiTGei~yVD~G~~i~~m~  256 (259)
T COG0623         215 LRRNVTIEEVGNTAAFLLS-DLSSGITGEIIYVDSGYHIMGMG  256 (259)
T ss_pred             ccCCCCHHHhhhhHHHHhc-chhcccccceEEEcCCceeeccC
Confidence            6788999999999999998 99999999999999888766543

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.5e-33  Score=248.35  Aligned_cols=239  Identities=22%  Similarity=0.206  Sum_probs=194.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      |+++||||++|||++++++|+++|++|++++|+.+..++..+++.... .....++.+|++++++++++++++.+.++++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALG-GTVPEHRALDISDYDAVAAFAADIHAAHGSM   79 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCcceEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            589999999999999999999999999999999888877777776542 2235668999999999999999999999999


Q ss_pred             eEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCC
Q 021391          110 NILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIN  187 (313)
Q Consensus       110 d~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  187 (313)
                      |++|||+|.....  .+.+.++++..+++|+.+++.++++++|.|.+.    +..++||++||..+..+.+         
T Consensus        80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~----~~~g~ii~isS~~~~~~~~---------  146 (272)
T PRK07832         80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAA----GRGGHLVNVSSAAGLVALP---------  146 (272)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC----CCCcEEEEEccccccCCCC---------
Confidence            9999999976432  377889999999999999999999999999763    2357999999998776655         


Q ss_pred             CCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc---------hhHhHHHHHHHhhcCC
Q 021391          188 DESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG---------ILRGFCNTVGKLVLKN  258 (313)
Q Consensus       188 ~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~  258 (313)
                            ....|+++|+++++++++++.|+.++|  |+|++|+||+++|++.....         ....+... ...+..+
T Consensus       147 ------~~~~Y~~sK~a~~~~~~~l~~e~~~~~--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  217 (272)
T PRK07832        147 ------WHAAYSASKFGLRGLSEVLRFDLARHG--IGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDR-FRGHAVT  217 (272)
T ss_pred             ------CCcchHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCcccCcchhcccccccCcchhhHHHHHHh-cccCCCC
Confidence                  677899999999999999999999988  99999999999999865421         00111111 1234579


Q ss_pred             hHHHHHHHHHHHccCCccCCCceeecCCcccCCCc
Q 021391          259 IPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNS  293 (313)
Q Consensus       259 ~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~  293 (313)
                      |+++|+.+++++.  ...+++|..+..+.......
T Consensus       218 ~~~vA~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  250 (272)
T PRK07832        218 PEKAAEKILAGVE--KNRYLVYTSPDIRALYWFKR  250 (272)
T ss_pred             HHHHHHHHHHHHh--cCCeEEecCcchHHHHHHHh
Confidence            9999999999995  45677777666555544433

>PRK07060 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.1e-33  Score=244.18  Aligned_cols=234  Identities=28%  Similarity=0.303  Sum_probs=192.5

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      +++++++|+++||||++|||+++++.|+++|++|++++|+.++.++..++.       ...++.+|+++.+++.++++. 
T Consensus         3 ~~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~~~~-   74 (245)
T PRK07060          3 MAFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-------GCEPLRLDVGDDAAIRAALAA-   74 (245)
T ss_pred             cccccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------CCeEEEecCCCHHHHHHHHHH-
Confidence            456789999999999999999999999999999999999987665544322       356789999999988887775 


Q ss_pred             hhcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          103 NSQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                         .+++|++|||+|.....  .+.+.+++++.+++|+.+++.+++++.+.+.+.    ...++||++||..+..+.+  
T Consensus        75 ---~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~~~~iv~~sS~~~~~~~~--  145 (245)
T PRK07060         75 ---AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAA----GRGGSIVNVSSQAALVGLP--  145 (245)
T ss_pred             ---hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc----CCCcEEEEEccHHHcCCCC--
Confidence               46899999999986543  266778899999999999999999999998762    2247999999998877655  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----chhHhHHHHHHHhhc
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----GILRGFCNTVGKLVL  256 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~~~~~  256 (313)
                                   ....|+++|++++.++++++.++.+.|  |++++++||++.|++....    .....+....+....
T Consensus       146 -------------~~~~y~~sK~a~~~~~~~~a~~~~~~~--i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (245)
T PRK07060        146 -------------DHLAYCASKAALDAITRVLCVELGPHG--IRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRF  210 (245)
T ss_pred             -------------CCcHhHHHHHHHHHHHHHHHHHHhhhC--eEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCC
Confidence                         567899999999999999999999888  9999999999999975421    111222233344557


Q ss_pred             CChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          257 KNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       257 ~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      .+++|+|+.++++++ +...+++|+++..+++.
T Consensus       211 ~~~~d~a~~~~~l~~-~~~~~~~G~~~~~~~g~  242 (245)
T PRK07060        211 AEVDDVAAPILFLLS-DAASMVSGVSLPVDGGY  242 (245)
T ss_pred             CCHHHHHHHHHHHcC-cccCCccCcEEeECCCc
Confidence            899999999999998 67789999999988764

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=9.3e-33  Score=248.55  Aligned_cols=229  Identities=24%  Similarity=0.217  Sum_probs=187.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|.++++++++++.+.
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~~   80 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ--GAEVLGVRTDVSDAAQVEALADAALER   80 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999988888777776554  457888999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccC-CCCCeEEEECCccccccccCCCC
Q 021391          106 GRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKS-SREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~-~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      ++++|+||||||......  +.+.++++..+++|+.++++++++++|.|.+...+. ...++||++||.++..+.+    
T Consensus        81 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----  156 (287)
T PRK06194         81 FGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPP----  156 (287)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC----
Confidence            999999999999875532  677899999999999999999999999998842100 0127999999998887655    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccch-----------------hH
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI-----------------LR  245 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~-----------------~~  245 (313)
                                 ....|+++|++++.++++++.++...+..||+++++||+++|++......                 ..
T Consensus       157 -----------~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (287)
T PRK06194        157 -----------AMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQ  225 (287)
T ss_pred             -----------CCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHH
Confidence                       56789999999999999999999865555999999999999988653210                 00


Q ss_pred             hHHHHHHHhhcCChHHHHHHHHHHHc
Q 021391          246 GFCNTVGKLVLKNIPQGAATTCYVAL  271 (313)
Q Consensus       246 ~~~~~~~~~~~~~~~eva~~~~~l~~  271 (313)
                      +...........+++|+|+.++..+.
T Consensus       226 ~~~~~~~~~~~~s~~dva~~i~~~~~  251 (287)
T PRK06194        226 AMSQKAVGSGKVTAEEVAQLVFDAIR  251 (287)
T ss_pred             HHHHhhhhccCCCHHHHHHHHHHHHH
Confidence            11111111223689999999999885

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3e-33  Score=267.33  Aligned_cols=235  Identities=28%  Similarity=0.272  Sum_probs=193.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc--hhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM--AAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .++||++|||||++|||+++++.|+++|++|+++++..  +.+++.    ..+.   +..++.+|+++.++++++++.+.
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~----~~~~---~~~~~~~Dv~~~~~~~~~~~~~~  279 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAV----ANRV---GGTALALDITAPDAPARIAEHLA  279 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHH----HHHc---CCeEEEEeCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999998843  222322    2221   24578999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          104 SQGRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      +.++++|++|||+|+.....  +.+.+.|+..+++|+.+++++.+.+.+.+..     +.+++||++||.++..+.+   
T Consensus       280 ~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~-----~~~g~iv~~SS~~~~~g~~---  351 (450)
T PRK08261        280 ERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGAL-----GDGGRIVGVSSISGIAGNR---  351 (450)
T ss_pred             HhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhh-----cCCCEEEEECChhhcCCCC---
Confidence            99999999999999875432  6788999999999999999999999997554     3368999999999887666   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchh-HhHHH-HHHHhhcCCh
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGIL-RGFCN-TVGKLVLKNI  259 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~-~~~~~-~~~~~~~~~~  259 (313)
                                  ++..|+++|+++++++++++.++.++|  |++|+|+||+++|++....+.. ..... ..+..+...|
T Consensus       352 ------------~~~~Y~asKaal~~~~~~la~el~~~g--i~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~l~~~~~p  417 (450)
T PRK08261        352 ------------GQTNYAASKAGVIGLVQALAPLLAERG--ITINAVAPGFIETQMTAAIPFATREAGRRMNSLQQGGLP  417 (450)
T ss_pred             ------------CChHHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEEeCcCcchhhhccchhHHHHHhhcCCcCCCCCH
Confidence                        678999999999999999999999999  9999999999999887644321 11111 1122345689


Q ss_pred             HHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          260 PQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       260 ~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      +|+|+++.||++ +.+.++||+++.++|+..
T Consensus       418 ~dva~~~~~l~s-~~~~~itG~~i~v~g~~~  447 (450)
T PRK08261        418 VDVAETIAWLAS-PASGGVTGNVVRVCGQSL  447 (450)
T ss_pred             HHHHHHHHHHhC-hhhcCCCCCEEEECCCcc
Confidence            999999999997 888999999999887643

>PRK07074 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-32  Score=243.97  Aligned_cols=235  Identities=23%  Similarity=0.257  Sum_probs=194.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      +|++|||||++|||++++++|+++|++|++++|+.+..+...+++.    +.+++++.+|++|.+++..+++++.+++++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG----DARFVPVACDLTDAASLAAALANAAAERGP   77 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            5899999999999999999999999999999999887777666552    346889999999999999999999999999


Q ss_pred             eeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          109 LNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       109 id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                      +|++|||+|......  +.+.+++.+.+++|+.+++.+++++.+.+.+     +..++||++||..+... .        
T Consensus        78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~~~iv~~sS~~~~~~-~--------  143 (257)
T PRK07074         78 VDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLK-----RSRGAVVNIGSVNGMAA-L--------  143 (257)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH-----cCCeEEEEEcchhhcCC-C--------
Confidence            999999999865422  6677889999999999999999999999987     34689999999765432 1        


Q ss_pred             CCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-----chhHhHHHHHHHhhcCChHH
Q 021391          187 NDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-----GILRGFCNTVGKLVLKNIPQ  261 (313)
Q Consensus       187 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-----~~~~~~~~~~~~~~~~~~~e  261 (313)
                             +...|+++|++++.++++++.++.++|  |+||+++||++.|++....     .+........+......++|
T Consensus       144 -------~~~~y~~sK~a~~~~~~~~a~~~~~~g--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  214 (257)
T PRK07074        144 -------GHPAYSAAKAGLIHYTKLLAVEYGRFG--IRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDD  214 (257)
T ss_pred             -------CCcccHHHHHHHHHHHHHHHHHHhHhC--eEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHH
Confidence                   346899999999999999999999999  9999999999999875432     11111112223345689999


Q ss_pred             HHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          262 GAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       262 va~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      +++++++|++ +...+++|+++..+++...
T Consensus       215 ~a~~~~~l~~-~~~~~~~g~~~~~~~g~~~  243 (257)
T PRK07074        215 VANAVLFLAS-PAARAITGVCLPVDGGLTA  243 (257)
T ss_pred             HHHHHHHHcC-chhcCcCCcEEEeCCCcCc
Confidence            9999999997 7678999999987766544

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-32  Score=245.05  Aligned_cols=219  Identities=21%  Similarity=0.236  Sum_probs=187.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      |+++||||++|||++++++|+++|++|++++|+.+++++..+++...  +.++.++.+|++++++++++++.+.+.++++
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   78 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREA--GGDGFYQRCDVRDYSQLTALAQACEEKWGGI   78 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999998888888777654  4578899999999999999999999999999


Q ss_pred             eEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCC
Q 021391          110 NILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIN  187 (313)
Q Consensus       110 d~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  187 (313)
                      |+||||+|+....  .+.+.+++++++++|+.+++.+++.++|.|.+     ...++||++||..+..+.+         
T Consensus        79 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~~~iv~vsS~~~~~~~~---------  144 (270)
T PRK05650         79 DVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKR-----QKSGRIVNIASMAGLMQGP---------  144 (270)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHh-----CCCCEEEEECChhhcCCCC---------
Confidence            9999999987542  26677899999999999999999999999987     3368999999998887666         


Q ss_pred             CCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccch----hHhHHHHHHHhhcCChHHHH
Q 021391          188 DESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI----LRGFCNTVGKLVLKNIPQGA  263 (313)
Q Consensus       188 ~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~eva  263 (313)
                            ....|+++|+++++++++++.|+.+.|  |++++|+||+++|++......    ..............+++++|
T Consensus       145 ------~~~~Y~~sKaa~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA  216 (270)
T PRK05650        145 ------AMSSYNVAKAGVVALSETLLVELADDE--IGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIA  216 (270)
T ss_pred             ------CchHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCccccCcccccccCchhHHHHHHHHhhcCCCCHHHHH
Confidence                  678999999999999999999999998  999999999999998764311    11111222223357899999


Q ss_pred             HHHHHHHcc
Q 021391          264 ATTCYVALH  272 (313)
Q Consensus       264 ~~~~~l~~~  272 (313)
                      +.++..+..
T Consensus       217 ~~i~~~l~~  225 (270)
T PRK05650        217 DYIYQQVAK  225 (270)
T ss_pred             HHHHHHHhC
Confidence            999999974

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=2.2e-32  Score=240.03  Aligned_cols=241  Identities=28%  Similarity=0.329  Sum_probs=199.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchh-HHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAA-GKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      |++++|++|||||+++||+++++.|+++|++|+++.|+... .+...+++...  +.++.++.+|+++++++.++++++.
T Consensus         1 ~~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~   78 (248)
T PRK05557          1 MSLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGAL--GGKALAVQGDVSDAESVERAVDEAK   78 (248)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999888886643 44555555433  5578899999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          104 SQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      +.++++|++|||+|.....  .+.+.+.+++.+++|+.+++.+++++.+.+.+     ...+++|++||..+..+.+   
T Consensus        79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~~~v~iss~~~~~~~~---  150 (248)
T PRK05557         79 AEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMK-----QRSGRIINISSVVGLMGNP---  150 (248)
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-----cCCeEEEEEcccccCcCCC---
Confidence            9889999999999976543  26677889999999999999999999999987     3357999999998776655   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHHHHHHhhcCCh
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCNTVGKLVLKNI  259 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~  259 (313)
                                  +...|+++|++++.+++.++.++...+  |++++++||+++|++.....  +........+.....++
T Consensus       151 ------------~~~~y~~sk~a~~~~~~~~a~~~~~~~--i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (248)
T PRK05557        151 ------------GQANYAASKAGVIGFTKSLARELASRG--ITVNAVAPGFIETDMTDALPEDVKEAILAQIPLGRLGQP  216 (248)
T ss_pred             ------------CCchhHHHHHHHHHHHHHHHHHhhhhC--eEEEEEecCccCCccccccChHHHHHHHhcCCCCCCcCH
Confidence                        567899999999999999999999888  99999999999998765431  12222222233446789


Q ss_pred             HHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          260 PQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       260 ~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      +++++.+.+|+. +....++|+.+..+++..
T Consensus       217 ~~va~~~~~l~~-~~~~~~~g~~~~i~~~~~  246 (248)
T PRK05557        217 EEIASAVAFLAS-DEAAYITGQTLHVNGGMV  246 (248)
T ss_pred             HHHHHHHHHHcC-cccCCccccEEEecCCcc
Confidence            999999999987 567889999999877643

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.5e-33  Score=245.84  Aligned_cols=211  Identities=25%  Similarity=0.288  Sum_probs=180.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      +|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...  + ++.++.+|+++++++.++++++.+++++
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   78 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKA--A-RVSVYAADVRDADALAAAAADFIAAHGL   78 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccC--C-eeEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            479999999999999999999999999999999987776665554321  2 7889999999999999999999999999


Q ss_pred             eeEEEEcccCCCCCC---ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCC
Q 021391          109 LNILINNAGIMASPF---MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDK  185 (313)
Q Consensus       109 id~lv~~ag~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  185 (313)
                      +|++|||+|......   +.+.++++.++++|+.+++.+++.++|.|.+     .+.++||++||.++..+.+       
T Consensus        79 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~-----~~~~~iv~isS~~~~~~~~-------  146 (257)
T PRK07024         79 PDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRA-----ARRGTLVGIASVAGVRGLP-------  146 (257)
T ss_pred             CCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHh-----cCCCEEEEEechhhcCCCC-------
Confidence            999999999764322   2567889999999999999999999999987     4468999999999887766       


Q ss_pred             CCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHHHHH
Q 021391          186 INDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGAAT  265 (313)
Q Consensus       186 ~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~eva~~  265 (313)
                              ....|++||++++.++++++.|+.++|  |+|++|+||+++|++.....+.        .....+|+++|+.
T Consensus       147 --------~~~~Y~asK~a~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~--------~~~~~~~~~~a~~  208 (257)
T PRK07024        147 --------GAGAYSASKAAAIKYLESLRVELRPAG--VRVVTIAPGYIRTPMTAHNPYP--------MPFLMDADRFAAR  208 (257)
T ss_pred             --------CCcchHHHHHHHHHHHHHHHHHhhccC--cEEEEEecCCCcCchhhcCCCC--------CCCccCHHHHHHH
Confidence                    667899999999999999999999999  9999999999999975432211        1123579999999


Q ss_pred             HHHHHcc
Q 021391          266 TCYVALH  272 (313)
Q Consensus       266 ~~~l~~~  272 (313)
                      ++.++.+
T Consensus       209 ~~~~l~~  215 (257)
T PRK07024        209 AARAIAR  215 (257)
T ss_pred             HHHHHhC
Confidence            9999973

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.5e-33  Score=247.86  Aligned_cols=216  Identities=24%  Similarity=0.261  Sum_probs=178.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC-
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG-  106 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~-  106 (313)
                      .+|++|||||++|||++++++|+++|++|++++|+.+.++++.    .    ..+.++.+|++|.++++.+++++.+.+ 
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~----~----~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   74 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE----A----EGLEAFQLDYAEPESIAALVAQVLELSG   74 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----H----CCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3689999999999999999999999999999999977665432    2    247789999999999999999987765 


Q ss_pred             CCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCC
Q 021391          107 RPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFD  184 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  184 (313)
                      +++|++|||||+.....  +.+.++++..+++|+.+++.+++.++|.|.+     ...++||++||..+..+.+      
T Consensus        75 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~-----~~~g~iv~isS~~~~~~~~------  143 (277)
T PRK05993         75 GRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRK-----QGQGRIVQCSSILGLVPMK------  143 (277)
T ss_pred             CCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhh-----cCCCEEEEECChhhcCCCC------
Confidence            68999999999865432  6778899999999999999999999999988     4468999999998877665      


Q ss_pred             CCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchh-------------HhHHH--
Q 021391          185 KINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGIL-------------RGFCN--  249 (313)
Q Consensus       185 ~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~-------------~~~~~--  249 (313)
                               +...|++||++++.++++++.|+.+.|  |+|++|+||+++|++.......             ..+..  
T Consensus       144 ---------~~~~Y~asK~a~~~~~~~l~~el~~~g--i~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (277)
T PRK05993        144 ---------YRGAYNASKFAIEGLSLTLRMELQGSG--IHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQM  212 (277)
T ss_pred             ---------ccchHHHHHHHHHHHHHHHHHHhhhhC--CEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHH
Confidence                     677999999999999999999999999  9999999999999986542100             00000  


Q ss_pred             -HH-----HHhhcCChHHHHHHHHHHHccC
Q 021391          250 -TV-----GKLVLKNIPQGAATTCYVALHP  273 (313)
Q Consensus       250 -~~-----~~~~~~~~~eva~~~~~l~~~~  273 (313)
                       ..     ......+|+++|+.++..+.++
T Consensus       213 ~~~~~~~~~~~~~~~~~~va~~i~~a~~~~  242 (277)
T PRK05993        213 ARLEGGGSKSRFKLGPEAVYAVLLHALTAP  242 (277)
T ss_pred             HHHHhhhhccccCCCHHHHHHHHHHHHcCC
Confidence             00     1122358999999999998744

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.2e-32  Score=242.45  Aligned_cols=229  Identities=24%  Similarity=0.252  Sum_probs=193.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCC--CHHHHHHHHHHHh
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS--SLASVRKFASEYN  103 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s--~~~~v~~~~~~~~  103 (313)
                      .+++|+++||||+++||.+++++|+++|++|++++|+.++.++..+++.... ..++.++.+|++  +.+++.++++.+.
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~   87 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAG-GPQPAIIPLDLLTATPQNYQQLADTIE   87 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcC-CCCceEEEecccCCCHHHHHHHHHHHH
Confidence            3689999999999999999999999999999999999888877777776542 346777778876  7899999999999


Q ss_pred             hcCCCeeEEEEcccCCCC--C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          104 SQGRPLNILINNAGIMAS--P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~--~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      +.++++|+||||||....  + .+.+.+.++..+++|+.+++++++++.|.|.+     .+.++||++||..+..+.+  
T Consensus        88 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~-----~~~~~iv~~ss~~~~~~~~--  160 (247)
T PRK08945         88 EQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLK-----SPAASLVFTSSSVGRQGRA--  160 (247)
T ss_pred             HHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHh-----CCCCEEEEEccHhhcCCCC--
Confidence            999999999999997543  2 26677899999999999999999999999988     4478999999998877655  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChH
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIP  260 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  260 (313)
                                   .+..|++||++++.++++++.++...|  |++++++||+++|++.....  ..    .......+|+
T Consensus       161 -------------~~~~Y~~sK~a~~~~~~~~~~~~~~~~--i~~~~v~pg~v~t~~~~~~~--~~----~~~~~~~~~~  219 (247)
T PRK08945        161 -------------NWGAYAVSKFATEGMMQVLADEYQGTN--LRVNCINPGGTRTAMRASAF--PG----EDPQKLKTPE  219 (247)
T ss_pred             -------------CCcccHHHHHHHHHHHHHHHHHhcccC--EEEEEEecCCccCcchhhhc--Cc----ccccCCCCHH
Confidence                         677899999999999999999999988  99999999999998643221  00    0123467899


Q ss_pred             HHHHHHHHHHccCCccCCCceeec
Q 021391          261 QGAATTCYVALHPQVQGVSGEYFS  284 (313)
Q Consensus       261 eva~~~~~l~~~~~~~~~tG~~~~  284 (313)
                      |+++.++|+++ +...+++|+++.
T Consensus       220 ~~~~~~~~~~~-~~~~~~~g~~~~  242 (247)
T PRK08945        220 DIMPLYLYLMG-DDSRRKNGQSFD  242 (247)
T ss_pred             HHHHHHHHHhC-ccccccCCeEEe
Confidence            99999999997 777899999865

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-32  Score=246.42  Aligned_cols=219  Identities=25%  Similarity=0.271  Sum_probs=181.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .+|++|||||+||||++++++|+++|++|++++|+.++.+...+.    . +.++.++.+|++|++++.++++++.+.++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~----~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~~   77 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL----H-PDRALARLLDVTDFDAIDAVVADAEATFG   77 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh----c-CCCeeEEEccCCCHHHHHHHHHHHHHHhC
Confidence            578999999999999999999999999999999998765544322    2 34688899999999999999999999999


Q ss_pred             CeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCC
Q 021391          108 PLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDK  185 (313)
Q Consensus       108 ~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  185 (313)
                      ++|++|||+|.....  .+.+.+.+++.+++|+.++++++++++|+|.+     ...++||++||.++..+.+       
T Consensus        78 ~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~-----~~~~~iv~iSS~~~~~~~~-------  145 (277)
T PRK06180         78 PIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRA-----RRRGHIVNITSMGGLITMP-------  145 (277)
T ss_pred             CCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-----cCCCEEEEEecccccCCCC-------
Confidence            999999999986432  26677889999999999999999999999987     3467999999998887666       


Q ss_pred             CCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc---------chhHhH---H---HH
Q 021391          186 INDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN---------GILRGF---C---NT  250 (313)
Q Consensus       186 ~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~---------~~~~~~---~---~~  250 (313)
                              +...|+++|++++.++++++.++.+.|  |++++|+||.++|++....         .+...+   .   ..
T Consensus       146 --------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (277)
T PRK06180        146 --------GIGYYCGSKFALEGISESLAKEVAPFG--IHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREA  215 (277)
T ss_pred             --------CcchhHHHHHHHHHHHHHHHHHhhhhC--cEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHh
Confidence                    678999999999999999999999988  9999999999999864321         011000   0   01


Q ss_pred             HHHhhcCChHHHHHHHHHHHccC
Q 021391          251 VGKLVLKNIPQGAATTCYVALHP  273 (313)
Q Consensus       251 ~~~~~~~~~~eva~~~~~l~~~~  273 (313)
                      .......+|+++|+++++++..+
T Consensus       216 ~~~~~~~~~~dva~~~~~~l~~~  238 (277)
T PRK06180        216 KSGKQPGDPAKAAQAILAAVESD  238 (277)
T ss_pred             hccCCCCCHHHHHHHHHHHHcCC
Confidence            11223568999999999999744

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=100.00  E-value=2.4e-32  Score=240.51  Aligned_cols=238  Identities=27%  Similarity=0.298  Sum_probs=199.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      +++|++|||||+++||++++++|+++|++|++++|+.++..+..+++...  +.++.++.+|++|.+++.++++++..++
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAA--GGKARARQVDVRDRAALKAAVAAGVEDF   81 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            57899999999999999999999999999999999988777777777654  3468899999999999999999999999


Q ss_pred             CCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccc-ccccCCCCC
Q 021391          107 RPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHR-FAYSEGIRF  183 (313)
Q Consensus       107 g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~-~~~~~~~~~  183 (313)
                      +++|++|||+|.....  .+.+.++++..++.|+.+++.+++.+.|.|.+     ...+++|++||..+. .+.+     
T Consensus        82 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~~ii~~ss~~~~~~~~~-----  151 (251)
T PRK12826         82 GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIR-----AGGGRIVLTSSVAGPRVGYP-----  151 (251)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH-----cCCcEEEEEechHhhccCCC-----
Confidence            9999999999876542  25678899999999999999999999999987     336799999998876 4444     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccch---hHhHHHHHHHhhcCChH
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI---LRGFCNTVGKLVLKNIP  260 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~  260 (313)
                                ....|+++|++++.+++.++.++.+.|  |+++.++||.+.|+..+....   ...+....+.....+++
T Consensus       152 ----------~~~~y~~sK~a~~~~~~~~~~~~~~~~--i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (251)
T PRK12826        152 ----------GLAHYAASKAGLVGFTRALALELAARN--ITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPLGRLGEPE  219 (251)
T ss_pred             ----------CccHHHHHHHHHHHHHHHHHHHHHHcC--eEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCCCCCcCHH
Confidence                      567899999999999999999999888  999999999999987654321   11122222334567899


Q ss_pred             HHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          261 QGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       261 eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      |+|+.+++++. +...+++|+++..+++.
T Consensus       220 dva~~~~~l~~-~~~~~~~g~~~~~~~g~  247 (251)
T PRK12826        220 DIAAAVLFLAS-DEARYITGQTLPVDGGA  247 (251)
T ss_pred             HHHHHHHHHhC-ccccCcCCcEEEECCCc
Confidence            99999999987 66778999998876544

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.9e-32  Score=238.82  Aligned_cols=221  Identities=25%  Similarity=0.280  Sum_probs=188.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      .++++++++||||++|||++++++|+++|++|++++|+.+..++..+++...  +.++.++.+|+++++++..+++++.+
T Consensus         3 ~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (239)
T PRK07666          3 QSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY--GVKVVIATADVSDYEEVTAAIEQLKN   80 (239)
T ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            3468899999999999999999999999999999999988877777777543  45789999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          105 QGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      +++++|++|||+|.....  .+.+.+++++.+++|+.+++++++++.|.+.+     ...+++|++||..+..+.+    
T Consensus        81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~~iv~~ss~~~~~~~~----  151 (239)
T PRK07666         81 ELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIE-----RQSGDIINISSTAGQKGAA----  151 (239)
T ss_pred             HcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-----CCCcEEEEEcchhhccCCC----
Confidence            999999999999976542  26677889999999999999999999999987     4468999999998877655    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHH
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQG  262 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~ev  262 (313)
                                 +...|+++|++++.++++++.++.+.|  |++++|+||.+.|++........    . ......+++++
T Consensus       152 -----------~~~~Y~~sK~a~~~~~~~~a~e~~~~g--i~v~~v~pg~v~t~~~~~~~~~~----~-~~~~~~~~~~~  213 (239)
T PRK07666        152 -----------VTSAYSASKFGVLGLTESLMQEVRKHN--IRVTALTPSTVATDMAVDLGLTD----G-NPDKVMQPEDL  213 (239)
T ss_pred             -----------CCcchHHHHHHHHHHHHHHHHHhhccC--cEEEEEecCcccCcchhhccccc----c-CCCCCCCHHHH
Confidence                       567899999999999999999999988  99999999999999755321110    0 11235689999


Q ss_pred             HHHHHHHHccCC
Q 021391          263 AATTCYVALHPQ  274 (313)
Q Consensus       263 a~~~~~l~~~~~  274 (313)
                      |+.++.+++.+.
T Consensus       214 a~~~~~~l~~~~  225 (239)
T PRK07666        214 AEFIVAQLKLNK  225 (239)
T ss_pred             HHHHHHHHhCCC
Confidence            999999998553

>PRK07577 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-32  Score=239.51  Aligned_cols=225  Identities=24%  Similarity=0.296  Sum_probs=185.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      +++|++|||||++|||++++++|+++|++|++++|+.+.      .    .   ...++.+|+++.++++++++++.+.+
T Consensus         1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~------~----~---~~~~~~~D~~~~~~~~~~~~~~~~~~   67 (234)
T PRK07577          1 MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID------D----F---PGELFACDLADIEQTAATLAQINEIH   67 (234)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc------c----c---CceEEEeeCCCHHHHHHHHHHHHHhC
Confidence            467999999999999999999999999999999998653      0    1   12478999999999999999988876


Q ss_pred             CCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCC
Q 021391          107 RPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFD  184 (313)
Q Consensus       107 g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  184 (313)
                       ++|++|||+|..... . +.+.+++++.+++|+.+++.+.+.+.|.|.+     ...++||++||... .+.+      
T Consensus        68 -~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~~iv~~sS~~~-~~~~------  134 (234)
T PRK07577         68 -PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKL-----REQGRIVNICSRAI-FGAL------  134 (234)
T ss_pred             -CCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-----cCCcEEEEEccccc-cCCC------
Confidence             689999999986542 2 5678899999999999999999999999987     34689999999853 3333      


Q ss_pred             CCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc-----hhHhHHHHHHHhhcCCh
Q 021391          185 KINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG-----ILRGFCNTVGKLVLKNI  259 (313)
Q Consensus       185 ~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~  259 (313)
                               ....|+++|++++.++++++.++.+.|  |++|+|+||+++|++.....     .........+.....+|
T Consensus       135 ---------~~~~Y~~sK~a~~~~~~~~a~e~~~~g--i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (234)
T PRK07577        135 ---------DRTSYSAAKSALVGCTRTWALELAEYG--ITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTP  203 (234)
T ss_pred             ---------CchHHHHHHHHHHHHHHHHHHHHHhhC--cEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCcCH
Confidence                     467899999999999999999999999  99999999999999865321     11112222333445689


Q ss_pred             HHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          260 PQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       260 ~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      +|+|+.++++++ +...+++|+++..+++.
T Consensus       204 ~~~a~~~~~l~~-~~~~~~~g~~~~~~g~~  232 (234)
T PRK07577        204 EEVAAAIAFLLS-DDAGFITGQVLGVDGGG  232 (234)
T ss_pred             HHHHHHHHHHhC-cccCCccceEEEecCCc
Confidence            999999999997 55678999999987654

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=100.00  E-value=3e-32  Score=239.50  Aligned_cols=238  Identities=26%  Similarity=0.325  Sum_probs=193.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEE-ecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMA-VRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      |++|||||++|||++++++|+++|++|+++ .|+.+..++...++...  +.++.++.+|++|+++++++++++.+++++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~   79 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA--GGKAFVLQADISDENQVVAMFTAIDQHDEP   79 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhC--CCeEEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999874 57777666666666543  456888999999999999999999999999


Q ss_pred             eeEEEEcccCCCCC---CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCC
Q 021391          109 LNILINNAGIMASP---FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDK  185 (313)
Q Consensus       109 id~lv~~ag~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  185 (313)
                      +|++|||+|.....   .+.+.++++.++++|+.+++.+++.+++.+.+..  ...++++|++||..+..+.+.      
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~~g~~v~~sS~~~~~~~~~------  151 (247)
T PRK09730         80 LAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKH--GGSGGAIVNVSSAASRLGAPG------  151 (247)
T ss_pred             CCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC--CCCCcEEEEECchhhccCCCC------
Confidence            99999999975332   2667788999999999999999999999998731  123578999999988766551      


Q ss_pred             CCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccch---hHhHHHHHHHhhcCChHHH
Q 021391          186 INDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI---LRGFCNTVGKLVLKNIPQG  262 (313)
Q Consensus       186 ~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~ev  262 (313)
                              .+..|+++|++++.++++++.++.+.|  |++++|+||.+.|++......   ........+..+..+++|+
T Consensus       152 --------~~~~Y~~sK~~~~~~~~~l~~~~~~~~--i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  221 (247)
T PRK09730        152 --------EYVDYAASKGAIDTLTTGLSLEVAAQG--IRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQPEEV  221 (247)
T ss_pred             --------cccchHhHHHHHHHHHHHHHHHHHHhC--eEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCCCCcCHHHH
Confidence                    235799999999999999999999988  999999999999997543211   1112222233345689999


Q ss_pred             HHHHHHHHccCCccCCCceeecCCcc
Q 021391          263 AATTCYVALHPQVQGVSGEYFSDSNI  288 (313)
Q Consensus       263 a~~~~~l~~~~~~~~~tG~~~~~~~~  288 (313)
                      |+.++++++ +...+++|+++..+++
T Consensus       222 a~~~~~~~~-~~~~~~~g~~~~~~g~  246 (247)
T PRK09730        222 AQAIVWLLS-DKASYVTGSFIDLAGG  246 (247)
T ss_pred             HHHHHhhcC-hhhcCccCcEEecCCC
Confidence            999999998 5667899999988763

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-32  Score=243.56  Aligned_cols=214  Identities=17%  Similarity=0.140  Sum_probs=178.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcC-CEEEEEecCchh-HHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRG-VHVIMAVRNMAA-GKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G-~~V~l~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      -++|++|||||++|||+++|++|+++| ++|++++|+.+. +++..+++...+ +.+++++.+|++|.+++.++++++.+
T Consensus         6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~   84 (253)
T PRK07904          6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAG-ASSVEVIDFDALDTDSHPKVIDAAFA   84 (253)
T ss_pred             CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcC-CCceEEEEecCCChHHHHHHHHHHHh
Confidence            578999999999999999999999995 899999999876 777777776542 34789999999999999999999876


Q ss_pred             cCCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          105 QGRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                       ++++|++|||+|......  ..+.+...+++++|+.+++.+++.++|.|.+     ++.++||++||..+..+.+    
T Consensus        85 -~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~-----~~~~~iv~isS~~g~~~~~----  154 (253)
T PRK07904         85 -GGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRA-----QGFGQIIAMSSVAGERVRR----  154 (253)
T ss_pred             -cCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHh-----cCCceEEEEechhhcCCCC----
Confidence             489999999999864322  1223344568999999999999999999998     4468999999998766544    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHH
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQG  262 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~ev  262 (313)
                                 +...|++||+++..|+++++.|+.++|  |+|++|+||+++|++......         .....+|+++
T Consensus       155 -----------~~~~Y~~sKaa~~~~~~~l~~el~~~~--i~v~~v~Pg~v~t~~~~~~~~---------~~~~~~~~~~  212 (253)
T PRK07904        155 -----------SNFVYGSTKAGLDGFYLGLGEALREYG--VRVLVVRPGQVRTRMSAHAKE---------APLTVDKEDV  212 (253)
T ss_pred             -----------CCcchHHHHHHHHHHHHHHHHHHhhcC--CEEEEEeeCceecchhccCCC---------CCCCCCHHHH
Confidence                       556899999999999999999999999  999999999999998764321         1124689999


Q ss_pred             HHHHHHHHccC
Q 021391          263 AATTCYVALHP  273 (313)
Q Consensus       263 a~~~~~l~~~~  273 (313)
                      |+.++..+..+
T Consensus       213 A~~i~~~~~~~  223 (253)
T PRK07904        213 AKLAVTAVAKG  223 (253)
T ss_pred             HHHHHHHHHcC
Confidence            99999999743

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=7.9e-33  Score=226.96  Aligned_cols=184  Identities=30%  Similarity=0.320  Sum_probs=168.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      |++.|.|+|||||++|||+++|++|.+.|.+|++++|+++.++++.++      ...++...||+.|.+++.++++.+.+
T Consensus         1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~------~p~~~t~v~Dv~d~~~~~~lvewLkk   74 (245)
T COG3967           1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAE------NPEIHTEVCDVADRDSRRELVEWLKK   74 (245)
T ss_pred             CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhc------CcchheeeecccchhhHHHHHHHHHh
Confidence            578999999999999999999999999999999999999888876654      44688999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCCCC----ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          105 QGRPLNILINNAGIMASPF----MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      ++..+++||||||+.....    +...+..+..+.+|+.+|+.+++.++|++.+     ++.+.||++||..+..|+.  
T Consensus        75 ~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~-----q~~a~IInVSSGLafvPm~--  147 (245)
T COG3967          75 EYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLR-----QPEATIINVSSGLAFVPMA--  147 (245)
T ss_pred             hCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHh-----CCCceEEEeccccccCccc--
Confidence            9999999999999976522    4566777889999999999999999999999     5589999999999988877  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccC
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTN  236 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~  236 (313)
                                   ..+.|+++|+|++.++.+|..++...+  |.|.-+.|-.|+|+
T Consensus       148 -------------~~PvYcaTKAaiHsyt~aLR~Qlk~t~--veVIE~~PP~V~t~  188 (245)
T COG3967         148 -------------STPVYCATKAAIHSYTLALREQLKDTS--VEVIELAPPLVDTT  188 (245)
T ss_pred             -------------ccccchhhHHHHHHHHHHHHHHhhhcc--eEEEEecCCceecC
Confidence                         678999999999999999999999988  99999999999997

>PRK06924 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-32  Score=242.40  Aligned_cols=232  Identities=22%  Similarity=0.234  Sum_probs=184.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc-hhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNM-AAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      |+++||||++|||++++++|+++|++|++++|+. +.++..    .... +.+++++.+|++++++++.+++++.+.++.
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~----~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKL----AEQY-NSNLTFHSLDLQDVHELETNFNEILSSIQE   76 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHH----Hhcc-CCceEEEEecCCCHHHHHHHHHHHHHhcCc
Confidence            6899999999999999999999999999999986 333322    2211 457889999999999999999998776642


Q ss_pred             --e--eEEEEcccCCCC---CCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          109 --L--NILINNAGIMAS---PFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       109 --i--d~lv~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                        +  +++|||+|...+   ..+.+.+++.+.+++|+.+++.+++.++|+|.+.    +..++||++||..+..+.+   
T Consensus        77 ~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~~~~~iv~~sS~~~~~~~~---  149 (251)
T PRK06924         77 DNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDW----KVDKRVINISSGAAKNPYF---  149 (251)
T ss_pred             ccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhcc----CCCceEEEecchhhcCCCC---
Confidence              2  289999997543   2267889999999999999999999999999763    2357999999988776655   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc------c--hhHhHHHHHHH
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN------G--ILRGFCNTVGK  253 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~------~--~~~~~~~~~~~  253 (313)
                                  +...|+++|++++.+++.++.+++....+|+||+|+||+++|++....      .  ....+....+.
T Consensus       150 ------------~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (251)
T PRK06924        150 ------------GWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEE  217 (251)
T ss_pred             ------------CcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhc
Confidence                        678999999999999999999986432239999999999999975431      1  11122233344


Q ss_pred             hhcCChHHHHHHHHHHHccCCccCCCceeecCCc
Q 021391          254 LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSN  287 (313)
Q Consensus       254 ~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~  287 (313)
                      .+..+|+|+|+.++++++ + ..+++|+++..++
T Consensus       218 ~~~~~~~dva~~~~~l~~-~-~~~~~G~~~~v~~  249 (251)
T PRK06924        218 GKLLSPEYVAKALRNLLE-T-EDFPNGEVIDIDE  249 (251)
T ss_pred             CCcCCHHHHHHHHHHHHh-c-ccCCCCCEeehhh
Confidence            567899999999999998 4 3789999987664

>PRK06914 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.1e-32  Score=242.88  Aligned_cols=224  Identities=27%  Similarity=0.322  Sum_probs=186.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      |++|++|||||+||||+++++.|+++|++|++++|+.+..++..+++.....+.+++++.+|++|+++++. ++++.+.+
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~   79 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI   79 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc
Confidence            46899999999999999999999999999999999988877776665544334578999999999999999 99998889


Q ss_pred             CCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCC
Q 021391          107 RPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFD  184 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  184 (313)
                      +++|++|||+|......  +.+.+++++.+++|+.+++.+++.+.|.|.+     ...++||++||..+..+.+      
T Consensus        80 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~~iv~vsS~~~~~~~~------  148 (280)
T PRK06914         80 GRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRK-----QKSGKIINISSISGRVGFP------  148 (280)
T ss_pred             CCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-----cCCCEEEEECcccccCCCC------
Confidence            99999999999765432  5677899999999999999999999999987     4468999999988877655      


Q ss_pred             CCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc------------chh---HhHHH
Q 021391          185 KINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN------------GIL---RGFCN  249 (313)
Q Consensus       185 ~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~------------~~~---~~~~~  249 (313)
                               +...|+++|++++.++++++.++.++|  |++++++||+++|++....            .+.   .....
T Consensus       149 ---------~~~~Y~~sK~~~~~~~~~l~~~~~~~~--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (280)
T PRK06914        149 ---------GLSPYVSSKYALEGFSESLRLELKPFG--IDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQK  217 (280)
T ss_pred             ---------CCchhHHhHHHHHHHHHHHHHHhhhhC--CEEEEEecCCcccchhhccccccccccccccchHHHHHHHHH
Confidence                     677899999999999999999999999  9999999999999975421            000   11111


Q ss_pred             H--HHHhhcCChHHHHHHHHHHHccC
Q 021391          250 T--VGKLVLKNIPQGAATTCYVALHP  273 (313)
Q Consensus       250 ~--~~~~~~~~~~eva~~~~~l~~~~  273 (313)
                      .  .+..+..+|+|+|++++++++++
T Consensus       218 ~~~~~~~~~~~~~dva~~~~~~~~~~  243 (280)
T PRK06914        218 HINSGSDTFGNPIDVANLIVEIAESK  243 (280)
T ss_pred             HHhhhhhccCCHHHHHHHHHHHHcCC
Confidence            1  12234679999999999999854

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=4.3e-32  Score=237.85  Aligned_cols=240  Identities=28%  Similarity=0.305  Sum_probs=200.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      |++++|++|||||+++||++++++|+++|++|++++|+.+..+....++...  +.++.++.+|+++++++.++++++..
T Consensus         1 ~~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (246)
T PRK05653          1 MSLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAA--GGEARVLVFDVSDEAAVRALIEAAVE   78 (246)
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999988877766666543  55788999999999999999999988


Q ss_pred             cCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          105 QGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      .++++|++||++|.....  .+.+.++++..++.|+.+++++++++.|.+.+     ...++||++||..+..+.+    
T Consensus        79 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-----~~~~~ii~~ss~~~~~~~~----  149 (246)
T PRK05653         79 AFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIK-----ARYGRIVNISSVSGVTGNP----  149 (246)
T ss_pred             HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-----cCCcEEEEECcHHhccCCC----
Confidence            889999999999976542  26677889999999999999999999999977     3357999999988765544    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--chhHhHHHHHHHhhcCChH
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--GILRGFCNTVGKLVLKNIP  260 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~  260 (313)
                                 ....|+.+|++++.++++++.++.+.|  |++++|+||.+.++.....  ..........+.....+++
T Consensus       150 -----------~~~~y~~sk~~~~~~~~~l~~~~~~~~--i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (246)
T PRK05653        150 -----------GQTNYSAAKAGVIGFTKALALELASRG--ITVNAVAPGFIDTDMTEGLPEEVKAEILKEIPLGRLGQPE  216 (246)
T ss_pred             -----------CCcHhHhHHHHHHHHHHHHHHHHhhcC--eEEEEEEeCCcCCcchhhhhHHHHHHHHhcCCCCCCcCHH
Confidence                       567899999999999999999999888  9999999999999876531  1112222233334567889


Q ss_pred             HHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          261 QGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       261 eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      |+++.++++++ +....++|+++..+|+.
T Consensus       217 dva~~~~~~~~-~~~~~~~g~~~~~~gg~  244 (246)
T PRK05653        217 EVANAVAFLAS-DAASYITGQVIPVNGGM  244 (246)
T ss_pred             HHHHHHHHHcC-chhcCccCCEEEeCCCe
Confidence            99999999997 76788999999987764

>PRK12828 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4e-32  Score=237.22  Aligned_cols=234  Identities=24%  Similarity=0.204  Sum_probs=195.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .+++++|++|||||+++||++++++|+++|++|++++|+.++..+..+++..    ....++.+|++|.++++++++++.
T Consensus         2 ~~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~   77 (239)
T PRK12828          2 EHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPA----DALRIGGIDLVDPQAARRAVDEVN   77 (239)
T ss_pred             CCCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhh----cCceEEEeecCCHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999998776666555543    246778899999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          104 SQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      +.++++|++||++|.....  .+.+.+.+++.+++|+.+++.+++++.+.+.+     ++.++||++||..+..+.+   
T Consensus        78 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~~~iv~~sS~~~~~~~~---  149 (239)
T PRK12828         78 RQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTA-----SGGGRIVNIGAGAALKAGP---  149 (239)
T ss_pred             HHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHh-----cCCCEEEEECchHhccCCC---
Confidence            9999999999999976432  25678889999999999999999999999987     3468999999998876654   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHH
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQ  261 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~e  261 (313)
                                  ....|+++|++++.++++++.++.+.|  |+++.+.||++.|+.........      ......+++|
T Consensus       150 ------------~~~~y~~sk~a~~~~~~~~a~~~~~~~--i~~~~i~pg~v~~~~~~~~~~~~------~~~~~~~~~d  209 (239)
T PRK12828        150 ------------GMGAYAAAKAGVARLTEALAAELLDRG--ITVNAVLPSIIDTPPNRADMPDA------DFSRWVTPEQ  209 (239)
T ss_pred             ------------CcchhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCcccCcchhhcCCch------hhhcCCCHHH
Confidence                        567899999999999999999998888  99999999999998543221110      1122568999


Q ss_pred             HHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          262 GAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       262 va~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      +|+.++++++ +...+++|+.+..+++..
T Consensus       210 va~~~~~~l~-~~~~~~~g~~~~~~g~~~  237 (239)
T PRK12828        210 IAAVIAFLLS-DEAQAITGASIPVDGGVA  237 (239)
T ss_pred             HHHHHHHHhC-cccccccceEEEecCCEe
Confidence            9999999998 556689999999877543

>PRK09072 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-32  Score=242.10  Aligned_cols=219  Identities=22%  Similarity=0.249  Sum_probs=184.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      |+++++++|||||++|||++++++|+++|++|++++|+.+..++..+++ . . +.++.++.+|++|+++++.+++.+.+
T Consensus         1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~-~-~~~~~~~~~D~~d~~~~~~~~~~~~~   77 (263)
T PRK09072          1 MDLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-P-Y-PGRHRWVVADLTSEAGREAVLARARE   77 (263)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-h-c-CCceEEEEccCCCHHHHHHHHHHHHh
Confidence            5678999999999999999999999999999999999988887777666 2 2 45788999999999999999999876


Q ss_pred             cCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          105 QGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                       ++++|++|||+|.....  .+.+.+++++.+++|+.+++++++.+.|+|.+     +..++||++||..+..+.+    
T Consensus        78 -~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~-----~~~~~iv~isS~~~~~~~~----  147 (263)
T PRK09072         78 -MGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRA-----QPSAMVVNVGSTFGSIGYP----  147 (263)
T ss_pred             -cCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh-----cCCCEEEEecChhhCcCCC----
Confidence             78999999999976432  26678899999999999999999999999987     4468999999998877655    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHH
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQG  262 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~ev  262 (313)
                                 +...|+++|+++..++++++.++.+.|  |+|++|+||+++|++....  ....... ......+|+++
T Consensus       148 -----------~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~Pg~~~t~~~~~~--~~~~~~~-~~~~~~~~~~v  211 (263)
T PRK09072        148 -----------GYASYCASKFALRGFSEALRRELADTG--VRVLYLAPRATRTAMNSEA--VQALNRA-LGNAMDDPEDV  211 (263)
T ss_pred             -----------CccHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCcccccchhhh--ccccccc-ccCCCCCHHHH
Confidence                       567899999999999999999999998  9999999999999875432  1111111 11235689999


Q ss_pred             HHHHHHHHcc
Q 021391          263 AATTCYVALH  272 (313)
Q Consensus       263 a~~~~~l~~~  272 (313)
                      |+.+++++..
T Consensus       212 a~~i~~~~~~  221 (263)
T PRK09072        212 AAAVLQAIEK  221 (263)
T ss_pred             HHHHHHHHhC
Confidence            9999999974

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=6.9e-34  Score=226.98  Aligned_cols=241  Identities=26%  Similarity=0.262  Sum_probs=208.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      +.+|-++|||||.+|+|++.+.+|+++|+.|++.+...++.++..+++     +.++.|...|+++++++..++..++.+
T Consensus         6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel-----g~~~vf~padvtsekdv~aala~ak~k   80 (260)
T KOG1199|consen    6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL-----GGKVVFTPADVTSEKDVRAALAKAKAK   80 (260)
T ss_pred             hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh-----CCceEEeccccCcHHHHHHHHHHHHhh
Confidence            468899999999999999999999999999999999999999999888     789999999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCCC--------CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhc-cCCCCCeEEEECCcccccc
Q 021391          106 GRPLNILINNAGIMASP--------FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQ-KSSREGRIVNVSSEAHRFA  176 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~--------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~~~~g~iv~isS~~~~~~  176 (313)
                      ||++|.+|||||+....        ...+.|++++.+++|+.|+|++++.....|.++.. +..+.|.||+..|+++..+
T Consensus        81 fgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdg  160 (260)
T KOG1199|consen   81 FGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDG  160 (260)
T ss_pred             ccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecC
Confidence            99999999999976431        25678999999999999999999999999987643 3346789999999998876


Q ss_pred             ccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccch-hHhH-HHHHHH-
Q 021391          177 YSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI-LRGF-CNTVGK-  253 (313)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~-~~~~-~~~~~~-  253 (313)
                      ..               ++.+|++||.++.+++--+|+.++..|  ||+|.|.||.++||++...+. ...+ .+.+|- 
T Consensus       161 q~---------------gqaaysaskgaivgmtlpiardla~~g--ir~~tiapglf~tpllsslpekv~~fla~~ipfp  223 (260)
T KOG1199|consen  161 QT---------------GQAAYSASKGAIVGMTLPIARDLAGDG--IRFNTIAPGLFDTPLLSSLPEKVKSFLAQLIPFP  223 (260)
T ss_pred             cc---------------chhhhhcccCceEeeechhhhhcccCc--eEEEeecccccCChhhhhhhHHHHHHHHHhCCCc
Confidence            55               789999999999999999999999999  999999999999999876531 1222 223332 


Q ss_pred             hhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          254 LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       254 ~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      .++..|.|.+..+-....   ..+++|+.|.-||..+-
T Consensus       224 srlg~p~eyahlvqaiie---np~lngevir~dgalrm  258 (260)
T KOG1199|consen  224 SRLGHPHEYAHLVQAIIE---NPYLNGEVIRFDGALRM  258 (260)
T ss_pred             hhcCChHHHHHHHHHHHh---CcccCCeEEEecceecC
Confidence            367899999998888886   36899999998886653

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=100.00  E-value=6.7e-32  Score=238.08  Aligned_cols=225  Identities=22%  Similarity=0.315  Sum_probs=181.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      ++++||||++|||+++++.|+++|++|++++|+.++++...+.+     +.+++++.+|+++.++++.+++++.+.++++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   75 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVRNRAAIEEMLASLPAEWRNI   75 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----ccceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            47999999999999999999999999999999987766554433     3468899999999999999999999999999


Q ss_pred             eEEEEcccCCCC--C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          110 NILINNAGIMAS--P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       110 d~lv~~ag~~~~--~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                      |++|||+|+...  + .+.+.+++++++++|+.+++.+++.++|.|.+     ...++||++||..+..+.+        
T Consensus        76 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~~iv~isS~~~~~~~~--------  142 (248)
T PRK10538         76 DVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVE-----RNHGHIINIGSTAGSWPYA--------  142 (248)
T ss_pred             CEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-----cCCcEEEEECCcccCCCCC--------
Confidence            999999997532  2 26788999999999999999999999999987     3467999999988776554        


Q ss_pred             CCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccch---hHhHHHHHHHhhcCChHHHH
Q 021391          187 NDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI---LRGFCNTVGKLVLKNIPQGA  263 (313)
Q Consensus       187 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~eva  263 (313)
                             +...|+++|++++.+++.++.++.+.|  |++|+|+||++.|+......+   ..............+|+|+|
T Consensus       143 -------~~~~Y~~sK~~~~~~~~~l~~~~~~~~--i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA  213 (248)
T PRK10538        143 -------GGNVYGATKAFVRQFSLNLRTDLHGTA--VRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVS  213 (248)
T ss_pred             -------CCchhHHHHHHHHHHHHHHHHHhcCCC--cEEEEEeCCeecccccchhhccCcHHHHHhhccccCCCCHHHHH
Confidence                   567899999999999999999999999  999999999998544322111   11111111122456899999


Q ss_pred             HHHHHHHccCCccCCCcee
Q 021391          264 ATTCYVALHPQVQGVSGEY  282 (313)
Q Consensus       264 ~~~~~l~~~~~~~~~tG~~  282 (313)
                      ++++|+++.+ ..+.+|+.
T Consensus       214 ~~~~~l~~~~-~~~~~~~~  231 (248)
T PRK10538        214 EAVWWVATLP-AHVNINTL  231 (248)
T ss_pred             HHHHHHhcCC-Ccccchhh
Confidence            9999999844 34445544

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6.6e-32  Score=238.13  Aligned_cols=239  Identities=21%  Similarity=0.201  Sum_probs=191.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecC-chhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRN-MAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      |+++++++|||||++|||++++++|+++|++|++..|+ .+......+.+...  +.++.++.+|+++++++.++++++.
T Consensus         2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   79 (252)
T PRK06077          2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN--GGEGIGVLADVSTREGCETLAKATI   79 (252)
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHc--CCeeEEEEeccCCHHHHHHHHHHHH
Confidence            56789999999999999999999999999999887764 34444444444433  4567889999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          104 SQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      +.++++|++|||+|.....  .+.+.+.++..+++|+.+++.+++++.|.+.+       .+++|++||.++..+.+   
T Consensus        80 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~---  149 (252)
T PRK06077         80 DRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE-------GGAIVNIASVAGIRPAY---  149 (252)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc-------CcEEEEEcchhccCCCC---
Confidence            9999999999999975432  25677788999999999999999999999876       57999999998876655   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----h-hHhHHHHH-HHhh
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----I-LRGFCNTV-GKLV  255 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----~-~~~~~~~~-~~~~  255 (313)
                                  ++..|+++|++++.++++++.++.+ +  |+++.+.||+++|++.....    . ........ ....
T Consensus       150 ------------~~~~Y~~sK~~~~~~~~~l~~~~~~-~--i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (252)
T PRK06077        150 ------------GLSIYGAMKAAVINLTKYLALELAP-K--IRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGK  214 (252)
T ss_pred             ------------CchHHHHHHHHHHHHHHHHHHHHhc-C--CEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCC
Confidence                        6789999999999999999999987 7  99999999999998754321    0 11111111 1224


Q ss_pred             cCChHHHHHHHHHHHccCCccCCCceeecCCcccCCCc
Q 021391          256 LKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNS  293 (313)
Q Consensus       256 ~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~  293 (313)
                      ..+|+|+|+++++++++   ..++|+.+..+++....+
T Consensus       215 ~~~~~dva~~~~~~~~~---~~~~g~~~~i~~g~~~~~  249 (252)
T PRK06077        215 ILDPEEVAEFVAAILKI---ESITGQVFVLDSGESLKG  249 (252)
T ss_pred             CCCHHHHHHHHHHHhCc---cccCCCeEEecCCeeccC
Confidence            58999999999999962   357888888776665544

>PRK08267 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6e-32  Score=239.89  Aligned_cols=216  Identities=21%  Similarity=0.191  Sum_probs=181.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc-CCC
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ-GRP  108 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~-~g~  108 (313)
                      |++|||||++|||++++++|+++|++|++++|+.+..++..+.+.    +.+++++++|+++.+++.++++.+.++ +++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~   77 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG----AGNAWTGALDVTDRAAWDAALADFAAATGGR   77 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            789999999999999999999999999999999887776655432    457899999999999999999998776 789


Q ss_pred             eeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          109 LNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       109 id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                      +|+||||+|......  +.+.++++.++++|+.+++.+++++.++|.+     ..+++||++||..+..+.+        
T Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~~iv~isS~~~~~~~~--------  144 (260)
T PRK08267         78 LDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKA-----TPGARVINTSSASAIYGQP--------  144 (260)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-----CCCCEEEEeCchhhCcCCC--------
Confidence            999999999865432  6678899999999999999999999999987     4478999999998887766        


Q ss_pred             CCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHHHHHH
Q 021391          187 NDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGAATT  266 (313)
Q Consensus       187 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~eva~~~  266 (313)
                             ....|++||++++.++++++.++.+.|  |++|+|+||+++|++....................+|+++|+.+
T Consensus       145 -------~~~~Y~~sKaa~~~~~~~l~~~~~~~~--i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  215 (260)
T PRK08267        145 -------GLAVYSATKFAVRGLTEALDLEWRRHG--IRVADVMPLFVDTAMLDGTSNEVDAGSTKRLGVRLTPEDVAEAV  215 (260)
T ss_pred             -------CchhhHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCCcCCcccccccchhhhhhHhhccCCCCHHHHHHHH
Confidence                   567899999999999999999999998  99999999999999876410000101111122346889999999


Q ss_pred             HHHHc
Q 021391          267 CYVAL  271 (313)
Q Consensus       267 ~~l~~  271 (313)
                      +.++.
T Consensus       216 ~~~~~  220 (260)
T PRK08267        216 WAAVQ  220 (260)
T ss_pred             HHHHh
Confidence            99996

>PRK07775 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-31  Score=237.61  Aligned_cols=224  Identities=25%  Similarity=0.313  Sum_probs=184.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      ++.+|+++||||++|||++++++|+++|++|++++|+.+..++..+++...  +.++.++.+|+++++++.++++++.+.
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRAD--GGEAVAFPLDVTDPDSVKSFVAQAEEA   84 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            456799999999999999999999999999999999887776666555443  447888999999999999999999998


Q ss_pred             CCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          106 GRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      ++++|++|||+|.....  .+.+.+.+++.+++|+.++++++++++|.|.+     +..++||++||..+..+.+     
T Consensus        85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~-----~~~g~iv~isS~~~~~~~~-----  154 (274)
T PRK07775         85 LGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIE-----RRRGDLIFVGSDVALRQRP-----  154 (274)
T ss_pred             cCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-----cCCceEEEECChHhcCCCC-----
Confidence            99999999999976442  26677889999999999999999999999987     3467999999998876655     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--chhHhHHHHH------HHhh
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--GILRGFCNTV------GKLV  255 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--~~~~~~~~~~------~~~~  255 (313)
                                ....|+++|++++.+++.++.++.+.|  |++++|+||+++|++....  ..........      ....
T Consensus       155 ----------~~~~Y~~sK~a~~~l~~~~~~~~~~~g--i~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (274)
T PRK07775        155 ----------HMGAYGAAKAGLEAMVTNLQMELEGTG--VRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDY  222 (274)
T ss_pred             ----------CcchHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeCCcccCcccccCChhhhhHHHHHHHHhccccccc
Confidence                      567899999999999999999999888  9999999999999864321  1111111111      1123


Q ss_pred             cCChHHHHHHHHHHHccC
Q 021391          256 LKNIPQGAATTCYVALHP  273 (313)
Q Consensus       256 ~~~~~eva~~~~~l~~~~  273 (313)
                      ...++|+|++++++++++
T Consensus       223 ~~~~~dva~a~~~~~~~~  240 (274)
T PRK07775        223 FLRASDLARAITFVAETP  240 (274)
T ss_pred             ccCHHHHHHHHHHHhcCC
Confidence            678999999999999854

>PRK07806 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.5e-32  Score=237.82  Aligned_cols=237  Identities=23%  Similarity=0.177  Sum_probs=184.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCch-hHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMA-AGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+ ..+...+++...  +.++.++.+|+++++++..+++++.+
T Consensus         3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (248)
T PRK07806          3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAA--GGRASAVGADLTDEESVAALMDTARE   80 (248)
T ss_pred             CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            368899999999999999999999999999999999753 455555555443  45688999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCC
Q 021391          105 QGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFD  184 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  184 (313)
                      .++++|++|||+|....    ....++..+++|+.+++++++.+.|.|.+       +++||++||..+... +      
T Consensus        81 ~~~~~d~vi~~ag~~~~----~~~~~~~~~~vn~~~~~~l~~~~~~~~~~-------~~~iv~isS~~~~~~-~------  142 (248)
T PRK07806         81 EFGGLDALVLNASGGME----SGMDEDYAMRLNRDAQRNLARAALPLMPA-------GSRVVFVTSHQAHFI-P------  142 (248)
T ss_pred             hCCCCcEEEECCCCCCC----CCCCcceeeEeeeHHHHHHHHHHHhhccC-------CceEEEEeCchhhcC-c------
Confidence            99999999999986422    12235678999999999999999999854       579999999654311 0      


Q ss_pred             CCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc---chhHhH-HHHHHHhhcCChH
Q 021391          185 KINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN---GILRGF-CNTVGKLVLKNIP  260 (313)
Q Consensus       185 ~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~---~~~~~~-~~~~~~~~~~~~~  260 (313)
                         ....++.+..|++||++++.++++++.++++.|  |+||+|+||++.|++....   ...... ....+..++.+|+
T Consensus       143 ---~~~~~~~~~~Y~~sK~a~e~~~~~l~~~~~~~~--i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (248)
T PRK07806        143 ---TVKTMPEYEPVARSKRAGEDALRALRPELAEKG--IGFVVVSGDMIEGTVTATLLNRLNPGAIEARREAAGKLYTVS  217 (248)
T ss_pred             ---cccCCccccHHHHHHHHHHHHHHHHHHHhhccC--eEEEEeCCccccCchhhhhhccCCHHHHHHHHhhhcccCCHH
Confidence               001122456899999999999999999999999  9999999999998765421   000110 1123445678999


Q ss_pred             HHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          261 QGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       261 eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      |+|++++++++   ..+++|+.+..++...
T Consensus       218 dva~~~~~l~~---~~~~~g~~~~i~~~~~  244 (248)
T PRK07806        218 EFAAEVARAVT---APVPSGHIEYVGGADY  244 (248)
T ss_pred             HHHHHHHHHhh---ccccCccEEEecCccc
Confidence            99999999997   3578999888776543

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-31  Score=236.42  Aligned_cols=213  Identities=20%  Similarity=0.238  Sum_probs=185.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      +|++|||||++|||++++++|+++|++|++++|+.+..++..+.+...+++.+++++.+|+++++++.++++++.+++++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999999999888888777776666778999999999999999999999999999


Q ss_pred             eeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          109 LNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       109 id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                      +|++|||+|+.....  +.+.+.+++.+++|+.+++.+++.+.|.|.+     ...++||++||..+..+.+.       
T Consensus        82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~~~iv~~sS~~~~~~~~~-------  149 (248)
T PRK08251         82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFRE-----QGSGHLVLISSVSAVRGLPG-------  149 (248)
T ss_pred             CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-----cCCCeEEEEeccccccCCCC-------
Confidence            999999999865432  5567788899999999999999999999987     34679999999888766541       


Q ss_pred             CCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHHHHHH
Q 021391          187 NDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGAATT  266 (313)
Q Consensus       187 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~eva~~~  266 (313)
                             ....|++||++++.+++.++.++...|  |++++|+||+++|++......         .....+++++|+.+
T Consensus       150 -------~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~pg~v~t~~~~~~~~---------~~~~~~~~~~a~~i  211 (248)
T PRK08251        150 -------VKAAYAASKAGVASLGEGLRAELAKTP--IKVSTIEPGYIRSEMNAKAKS---------TPFMVDTETGVKAL  211 (248)
T ss_pred             -------CcccHHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCcCcchhhhcccc---------CCccCCHHHHHHHH
Confidence                   257899999999999999999999888  999999999999998654321         12346799999999


Q ss_pred             HHHHc
Q 021391          267 CYVAL  271 (313)
Q Consensus       267 ~~l~~  271 (313)
                      +..+.
T Consensus       212 ~~~~~  216 (248)
T PRK08251        212 VKAIE  216 (248)
T ss_pred             HHHHh
Confidence            99886

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.6e-32  Score=240.53  Aligned_cols=214  Identities=30%  Similarity=0.303  Sum_probs=179.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      ++++++||||+||||++++++|+++|++|++++|+.+..+.          ..+++++++|++|+++++++++++.+++|
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~----------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g   72 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP----------IPGVELLELDVTDDASVQAAVDEVIARAG   72 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----------cCCCeeEEeecCCHHHHHHHHHHHHHhCC
Confidence            56899999999999999999999999999999998654321          23578999999999999999999999999


Q ss_pred             CeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCC
Q 021391          108 PLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDK  185 (313)
Q Consensus       108 ~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  185 (313)
                      ++|+||||+|+.....  +.+.+++++++++|+.+++.+++.++|.|.+     ...++||++||.++..+.+       
T Consensus        73 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~-----~~~~~iv~isS~~~~~~~~-------  140 (270)
T PRK06179         73 RIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRA-----QGSGRIINISSVLGFLPAP-------  140 (270)
T ss_pred             CCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-----cCCceEEEECCccccCCCC-------
Confidence            9999999999865432  6678899999999999999999999999988     4478999999998877666       


Q ss_pred             CCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----hhH---hH----HHHH--H
Q 021391          186 INDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----ILR---GF----CNTV--G  252 (313)
Q Consensus       186 ~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----~~~---~~----~~~~--~  252 (313)
                              ....|+++|++++.++++++.|+++.|  |++++|+||+++|++.....    ...   ..    ....  .
T Consensus       141 --------~~~~Y~~sK~a~~~~~~~l~~el~~~g--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (270)
T PRK06179        141 --------YMALYAASKHAVEGYSESLDHEVRQFG--IRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKA  210 (270)
T ss_pred             --------CccHHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhc
Confidence                    567899999999999999999999999  99999999999999865421    000   00    0010  1


Q ss_pred             HhhcCChHHHHHHHHHHHccC
Q 021391          253 KLVLKNIPQGAATTCYVALHP  273 (313)
Q Consensus       253 ~~~~~~~~eva~~~~~l~~~~  273 (313)
                      ..+..+|+++|+.++.++..+
T Consensus       211 ~~~~~~~~~va~~~~~~~~~~  231 (270)
T PRK06179        211 VKKADAPEVVADTVVKAALGP  231 (270)
T ss_pred             cccCCCHHHHHHHHHHHHcCC
Confidence            123468999999999999743

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=100.00  E-value=4.5e-32  Score=237.05  Aligned_cols=222  Identities=21%  Similarity=0.233  Sum_probs=174.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC--CEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           30 LTAIVTGASSGIGTETARVLALRG--VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      |++|||||++|||+++|++|+++|  ..|++.+|+....          ....++.++++|+++.++++++.+    +++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~----------~~~~~~~~~~~Dls~~~~~~~~~~----~~~   66 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD----------FQHDNVQWHALDVTDEAEIKQLSE----QFT   66 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc----------cccCceEEEEecCCCHHHHHHHHH----hcC
Confidence            579999999999999999999985  5677777754321          113478899999999999887543    457


Q ss_pred             CeeEEEEcccCCCCC-------C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccC
Q 021391          108 PLNILINNAGIMASP-------F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSE  179 (313)
Q Consensus       108 ~id~lv~~ag~~~~~-------~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~  179 (313)
                      ++|++|||+|.....       . +.+.+.+++.+++|+.+++.+++.++|.|.+     ++.++|+++||..+..... 
T Consensus        67 ~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~-----~~~~~i~~iss~~~~~~~~-  140 (235)
T PRK09009         67 QLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQ-----SESAKFAVISAKVGSISDN-  140 (235)
T ss_pred             CCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccc-----cCCceEEEEeecccccccC-
Confidence            899999999986421       1 4566789999999999999999999999977     3457999999866533210 


Q ss_pred             CCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCCh
Q 021391          180 GIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNI  259 (313)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  259 (313)
                                 .++++..|+++|++++.|+++|+.|+.+...+|+||+|+||+++|++.....      ...+.....+|
T Consensus       141 -----------~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~------~~~~~~~~~~~  203 (235)
T PRK09009        141 -----------RLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQ------QNVPKGKLFTP  203 (235)
T ss_pred             -----------CCCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchh------hccccCCCCCH
Confidence                       1225678999999999999999999987423399999999999999865321      12233446789


Q ss_pred             HHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          260 PQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       260 ~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      +|+|+.++++++ +...+++|+++..++..
T Consensus       204 ~~~a~~~~~l~~-~~~~~~~g~~~~~~g~~  232 (235)
T PRK09009        204 EYVAQCLLGIIA-NATPAQSGSFLAYDGET  232 (235)
T ss_pred             HHHHHHHHHHHH-cCChhhCCcEEeeCCcC
Confidence            999999999998 66778999999877654

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=100.00  E-value=2.4e-31  Score=234.57  Aligned_cols=236  Identities=33%  Similarity=0.384  Sum_probs=190.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchh--HHHHHHHHHHhCCC-CceEEEEccCCC-HHHHHHHHH
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAA--GKDVREAIVKEIPS-AKVDAMELDVSS-LASVRKFAS  100 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~--~~~~~~~l~~~~~~-~~~~~~~~D~s~-~~~v~~~~~  100 (313)
                      +.+.+|++|||||++|||+++|+.|+++|++|+++.|+.+.  .+...+... . .+ ..+.+..+|+++ .++++.+++
T Consensus         1 ~~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~Dvs~~~~~v~~~~~   78 (251)
T COG1028           1 MDLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK-E-AGGGRAAAVAADVSDDEESVEALVA   78 (251)
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH-h-cCCCcEEEEEecCCCCHHHHHHHHH
Confidence            35789999999999999999999999999999998887654  333333332 1 12 368888999998 999999999


Q ss_pred             HHhhcCCCeeEEEEcccCCCC--C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccc
Q 021391          101 EYNSQGRPLNILINNAGIMAS--P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAY  177 (313)
Q Consensus       101 ~~~~~~g~id~lv~~ag~~~~--~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~  177 (313)
                      ++...+|++|++|||||+...  + .+.+.+++++.+++|+.+++.+++.+.|.+.+       . +||++||..+. +.
T Consensus        79 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~-------~-~Iv~isS~~~~-~~  149 (251)
T COG1028          79 AAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKK-------Q-RIVNISSVAGL-GG  149 (251)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhh-------C-eEEEECCchhc-CC
Confidence            999999999999999998763  3 37788999999999999999999988888874       3 99999999988 65


Q ss_pred             cCCCCCCCCCCCCCCCc-cccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhH-----hHHHHH
Q 021391          178 SEGIRFDKINDESAYNS-FGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILR-----GFCNTV  251 (313)
Q Consensus       178 ~~~~~~~~~~~~~~~~~-~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~-----~~~~~~  251 (313)
                      +               + +.+|++||+|+++|++.++.|+.+.|  |++|+|+||+++|++........     ......
T Consensus       150 ~---------------~~~~~Y~~sK~al~~~~~~l~~e~~~~g--i~v~~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~  212 (251)
T COG1028         150 P---------------PGQAAYAASKAALIGLTKALALELAPRG--IRVNAVAPGYIDTPMTAALESAELEALKRLAARI  212 (251)
T ss_pred             C---------------CCcchHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEEeccCCCcchhhhhhhhhhHHHHHHhcC
Confidence            5               4 48999999999999999999999999  99999999999999887542211     111111


Q ss_pred             HHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcc
Q 021391          252 GKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNI  288 (313)
Q Consensus       252 ~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~  288 (313)
                      +..+...|++++..+.|+.+.....+++|..+..++.
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  249 (251)
T COG1028         213 PLGRLGTPEEVAAAVAFLASDEAASYITGQTLPVDGG  249 (251)
T ss_pred             CCCCCcCHHHHHHHHHHHcCcchhccccCCEEEeCCC
Confidence            2225667889999999888633466788887764443

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=100.00  E-value=1.6e-31  Score=222.74  Aligned_cols=232  Identities=28%  Similarity=0.346  Sum_probs=187.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHc-CCEE-EEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           28 TGLTAIVTGASSGIGTETARVLALR-GVHV-IMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~-G~~V-~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      .-|.++||||++|||..++++|.+. |..+ +.++|+.+++.+..+.....  ..+++.+++|+++.++++.+++++.+-
T Consensus         2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~--d~rvHii~Ldvt~deS~~~~~~~V~~i   79 (249)
T KOG1611|consen    2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKS--DSRVHIIQLDVTCDESIDNFVQEVEKI   79 (249)
T ss_pred             CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhcc--CCceEEEEEecccHHHHHHHHHHHHhh
Confidence            4467999999999999999999975 6654 45567787763333332223  569999999999999999999999887


Q ss_pred             --CCCeeEEEEcccCCCCCC---ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccC------CCCCeEEEECCcccc
Q 021391          106 --GRPLNILINNAGIMASPF---MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKS------SREGRIVNVSSEAHR  174 (313)
Q Consensus       106 --~g~id~lv~~ag~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~------~~~g~iv~isS~~~~  174 (313)
                        ..++|+|+||||+..+..   ..+.+.|.+.+++|..|++.+.|+++|++++.+.+.      ...+.|||+||.++.
T Consensus        80 Vg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s  159 (249)
T KOG1611|consen   80 VGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGS  159 (249)
T ss_pred             cccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccc
Confidence              558999999999876533   667788999999999999999999999999965321      224589999998876


Q ss_pred             ccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHh
Q 021391          175 FAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKL  254 (313)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~  254 (313)
                      .+....            .++.+|.+||+|++.++|+++.++.+++  |-|..+|||+|+|+|....             
T Consensus       160 ~~~~~~------------~~~~AYrmSKaAlN~f~ksls~dL~~~~--ilv~sihPGwV~TDMgg~~-------------  212 (249)
T KOG1611|consen  160 IGGFRP------------GGLSAYRMSKAALNMFAKSLSVDLKDDH--ILVVSIHPGWVQTDMGGKK-------------  212 (249)
T ss_pred             cCCCCC------------cchhhhHhhHHHHHHHHHHhhhhhcCCc--EEEEEecCCeEEcCCCCCC-------------
Confidence            443211            1678999999999999999999999998  9999999999999997733             


Q ss_pred             hcCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          255 VLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       255 ~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      ...++||.+..++.-+. .....-+|.|++.|+-.
T Consensus       213 a~ltveeSts~l~~~i~-kL~~~hnG~ffn~dlt~  246 (249)
T KOG1611|consen  213 AALTVEESTSKLLASIN-KLKNEHNGGFFNRDGTP  246 (249)
T ss_pred             cccchhhhHHHHHHHHH-hcCcccCcceEccCCCc
Confidence            13578999998888886 56667799999877543

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.1e-31  Score=231.32  Aligned_cols=240  Identities=25%  Similarity=0.281  Sum_probs=195.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchh-HHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAA-GKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      +++.|++|||||+++||++++++|+++|++|+++.|+..+ .+...+.+...  +.++.++.+|+++++++.++++++.+
T Consensus         3 ~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~   80 (249)
T PRK12825          3 SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL--GRRAQAVQADVTDKAALEAAVAAAVE   80 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc--CCceEEEECCcCCHHHHHHHHHHHHH
Confidence            3567899999999999999999999999998887765443 44444444433  45788999999999999999999988


Q ss_pred             cCCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          105 QGRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      .++++|++||++|......  +.+.+.++..+++|+.+++++++.+.+++.+     ...+++|++||..+..+.+    
T Consensus        81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~~~i~~SS~~~~~~~~----  151 (249)
T PRK12825         81 RFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRK-----QRGGRIVNISSVAGLPGWP----  151 (249)
T ss_pred             HcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-----cCCCEEEEECccccCCCCC----
Confidence            8889999999999765432  5678889999999999999999999999987     3467999999988876544    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHH--HHHHhhcCChH
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCN--TVGKLVLKNIP  260 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~--~~~~~~~~~~~  260 (313)
                                 ....|+.+|++++.+++.++.++.+.|  |+++.|+||.+.|++............  ..+.....+++
T Consensus       152 -----------~~~~y~~sK~~~~~~~~~~~~~~~~~~--i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (249)
T PRK12825        152 -----------GRSNYAAAKAGLVGLTKALARELAEYG--ITVNMVAPGDIDTDMKEATIEEAREAKDAETPLGRSGTPE  218 (249)
T ss_pred             -----------CchHHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEEECCccCCccccccchhHHhhhccCCCCCCcCHH
Confidence                       567899999999999999999999888  999999999999998665321111111  22334467899


Q ss_pred             HHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          261 QGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       261 eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      |+++.+.++++ .....++|+++..+++..
T Consensus       219 dva~~~~~~~~-~~~~~~~g~~~~i~~g~~  247 (249)
T PRK12825        219 DIARAVAFLCS-DASDYITGQVIEVTGGVD  247 (249)
T ss_pred             HHHHHHHHHhC-ccccCcCCCEEEeCCCEe
Confidence            99999999997 456789999999877654

>PRK07578 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-31  Score=227.31  Aligned_cols=196  Identities=18%  Similarity=0.185  Sum_probs=165.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      +++|||||++|||++++++|+++ ++|++++|+..                   .+++|+++++++++++++    .+++
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-------------------~~~~D~~~~~~~~~~~~~----~~~i   56 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-------------------DVQVDITDPASIRALFEK----VGKV   56 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-------------------ceEecCCChHHHHHHHHh----cCCC
Confidence            37999999999999999999999 99999998742                   368999999999998875    4789


Q ss_pred             eEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCC
Q 021391          110 NILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIN  187 (313)
Q Consensus       110 d~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  187 (313)
                      |++|||+|......  +.+.++|++.+++|+.+++++++.+.|+|.+       +++|+++||..+..+.+         
T Consensus        57 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~g~iv~iss~~~~~~~~---------  120 (199)
T PRK07578         57 DAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND-------GGSFTLTSGILSDEPIP---------  120 (199)
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------CCeEEEEcccccCCCCC---------
Confidence            99999999754322  6788899999999999999999999999976       57999999998877666         


Q ss_pred             CCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHHHHHHH
Q 021391          188 DESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGAATTC  267 (313)
Q Consensus       188 ~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~eva~~~~  267 (313)
                            .+..|+++|+++++++++++.|+ ++|  |+||+|+||+++|++.....       ..+.....+|+|+|+.++
T Consensus       121 ------~~~~Y~~sK~a~~~~~~~la~e~-~~g--i~v~~i~Pg~v~t~~~~~~~-------~~~~~~~~~~~~~a~~~~  184 (199)
T PRK07578        121 ------GGASAATVNGALEGFVKAAALEL-PRG--IRINVVSPTVLTESLEKYGP-------FFPGFEPVPAARVALAYV  184 (199)
T ss_pred             ------CchHHHHHHHHHHHHHHHHHHHc-cCC--eEEEEEcCCcccCchhhhhh-------cCCCCCCCCHHHHHHHHH
Confidence                  67899999999999999999999 888  99999999999998642111       112234578999999999


Q ss_pred             HHHccCCccCCCceeecC
Q 021391          268 YVALHPQVQGVSGEYFSD  285 (313)
Q Consensus       268 ~l~~~~~~~~~tG~~~~~  285 (313)
                      .+++    ..++|+.|.+
T Consensus       185 ~~~~----~~~~g~~~~~  198 (199)
T PRK07578        185 RSVE----GAQTGEVYKV  198 (199)
T ss_pred             HHhc----cceeeEEecc
Confidence            9886    3588988764

>PRK08324 short chain dehydrogenase; Validated

Probab=100.00  E-value=4.2e-31  Score=263.70  Aligned_cols=240  Identities=25%  Similarity=0.284  Sum_probs=201.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      .++||++|||||+||||++++++|+++|++|++++|+.+..+...+++...   .++.++.+|+++++++.++++++.+.
T Consensus       419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~---~~v~~v~~Dvtd~~~v~~~~~~~~~~  495 (681)
T PRK08324        419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP---DRALGVACDVTDEAAVQAAFEEAALA  495 (681)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc---CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999988877776666432   46889999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          106 GRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      +|++|++|||+|......  +.+.+.|+..+++|+.+++.+++.+.+.|.++    ..+++||++||..+..+.+     
T Consensus       496 ~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~----~~~g~iV~vsS~~~~~~~~-----  566 (681)
T PRK08324        496 FGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQ----GLGGSIVFIASKNAVNPGP-----  566 (681)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc----CCCcEEEEECCccccCCCC-----
Confidence            999999999999865432  67889999999999999999999999999873    2248999999998877655     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCccc--ccCCccccch---------h-H----hH
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSI--VTNLFRYNGI---------L-R----GF  247 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v--~t~~~~~~~~---------~-~----~~  247 (313)
                                +...|+++|++++.++++++.++++.|  |+||+|+||.+  .|++......         . .    .+
T Consensus       567 ----------~~~~Y~asKaa~~~l~~~la~e~~~~g--Irvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~  634 (681)
T PRK08324        567 ----------NFGAYGAAKAAELHLVRQLALELGPDG--IRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFY  634 (681)
T ss_pred             ----------CcHHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHH
Confidence                      678999999999999999999999999  99999999999  8876543200         0 0    11


Q ss_pred             HHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          248 CNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       248 ~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      ....+.....+++|+|++++++++ +....+||+++..+++..
T Consensus       635 ~~~~~l~~~v~~~DvA~a~~~l~s-~~~~~~tG~~i~vdgG~~  676 (681)
T PRK08324        635 RARNLLKREVTPEDVAEAVVFLAS-GLLSKTTGAIITVDGGNA  676 (681)
T ss_pred             HhcCCcCCccCHHHHHHHHHHHhC-ccccCCcCCEEEECCCch
Confidence            122223346789999999999997 667889999999876644

>PRK07041 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-31  Score=232.43  Aligned_cols=220  Identities=21%  Similarity=0.196  Sum_probs=178.1

Q ss_pred             EEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCeeEE
Q 021391           33 IVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNIL  112 (313)
Q Consensus        33 lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~id~l  112 (313)
                      |||||++|||++++++|+++|++|++++|+.+..+...+++..   +.+++++.+|+++++++.++++++    +++|++
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~----~~id~l   73 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG---GAPVRTAALDITDEAAVDAFFAEA----GPFDHV   73 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCceEEEEccCCCHHHHHHHHHhc----CCCCEE
Confidence            6999999999999999999999999999998777766665542   456889999999999999888763    789999


Q ss_pred             EEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCCC
Q 021391          113 INNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDES  190 (313)
Q Consensus       113 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~  190 (313)
                      |||+|.....  .+.+.+++++++++|+.+++++++  .+.+.+       .++||++||.++..+.+            
T Consensus        74 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~~-------~g~iv~~ss~~~~~~~~------------  132 (230)
T PRK07041         74 VITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIAP-------GGSLTFVSGFAAVRPSA------------  132 (230)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhcC-------CeEEEEECchhhcCCCC------------
Confidence            9999986542  266788999999999999999999  444432       68999999999877665            


Q ss_pred             CCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc------hhHhHHHHHHHhhcCChHHHHH
Q 021391          191 AYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG------ILRGFCNTVGKLVLKNIPQGAA  264 (313)
Q Consensus       191 ~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~eva~  264 (313)
                         +...|+++|++++.++++++.|+..    ||||+++||+++|++.....      .........+..+..+|+|+|+
T Consensus       133 ---~~~~Y~~sK~a~~~~~~~la~e~~~----irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  205 (230)
T PRK07041        133 ---SGVLQGAINAALEALARGLALELAP----VRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVAN  205 (230)
T ss_pred             ---cchHHHHHHHHHHHHHHHHHHHhhC----ceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHH
Confidence               6778999999999999999999974    99999999999998865321      1111112223334568999999


Q ss_pred             HHHHHHccCCccCCCceeecCCcccC
Q 021391          265 TTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       265 ~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      .++++++ +  .+++|+.+..+++..
T Consensus       206 ~~~~l~~-~--~~~~G~~~~v~gg~~  228 (230)
T PRK07041        206 AILFLAA-N--GFTTGSTVLVDGGHA  228 (230)
T ss_pred             HHHHHhc-C--CCcCCcEEEeCCCee
Confidence            9999997 3  579999888776543

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.98  E-value=7e-31  Score=233.16  Aligned_cols=239  Identities=27%  Similarity=0.299  Sum_probs=193.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      .++++|++|||||+++||++++++|+++|++|++++|+.+..+...++..    +.++.++.+|++|++++..+++++.+
T Consensus         7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (264)
T PRK12829          7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP----GAKVTATVADVADPAQVERVFDTAVE   82 (264)
T ss_pred             hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh----cCceEEEEccCCCHHHHHHHHHHHHH
Confidence            34789999999999999999999999999999999998776665544432    22678999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCCC---CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          105 QGRPLNILINNAGIMASP---FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      .++++|+||||+|.....   ...+.+.+++++++|+.+++.+++.+.+.+...    +.+++|+++||.++..+.+   
T Consensus        83 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~~~~~vv~~ss~~~~~~~~---  155 (264)
T PRK12829         83 RFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKAS----GHGGVIIALSSVAGRLGYP---  155 (264)
T ss_pred             HhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC----CCCeEEEEecccccccCCC---
Confidence            999999999999986332   266778999999999999999999999988762    1126799999888766655   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc-------------hhHhHH
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG-------------ILRGFC  248 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~-------------~~~~~~  248 (313)
                                  .+..|+.+|++++.+++.++.++...+  |++++|.||++.|++.....             +.....
T Consensus       156 ------------~~~~y~~~K~a~~~~~~~l~~~~~~~~--i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (264)
T PRK12829        156 ------------GRTPYAASKWAVVGLVKSLAIELGPLG--IRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYL  221 (264)
T ss_pred             ------------CCchhHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHH
Confidence                        567899999999999999999998888  99999999999998754321             001111


Q ss_pred             HHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          249 NTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       249 ~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      ...+.....+++++|++++++++ +....++|+++..+++.
T Consensus       222 ~~~~~~~~~~~~d~a~~~~~l~~-~~~~~~~g~~~~i~~g~  261 (264)
T PRK12829        222 EKISLGRMVEPEDIAATALFLAS-PAARYITGQAISVDGNV  261 (264)
T ss_pred             hcCCCCCCCCHHHHHHHHHHHcC-ccccCccCcEEEeCCCc
Confidence            11222346889999999999986 55677899998877654

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.98  E-value=7.9e-31  Score=229.41  Aligned_cols=235  Identities=18%  Similarity=0.130  Sum_probs=190.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      |++++|+++||||++|||.++++.|+++|++|++++|+.++.+...+.+..   ..+++++.+|+++.++++++++++..
T Consensus         1 ~~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~   77 (238)
T PRK05786          1 MRLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSK---YGNIHYVVGDVSSTESARNVIEKAAK   77 (238)
T ss_pred             CCcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCeEEEECCCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999998877765555543   23688999999999999999999988


Q ss_pred             cCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccc-cccCCCCC
Q 021391          105 QGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRF-AYSEGIRF  183 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~-~~~~~~~~  183 (313)
                      .++++|.+|+++|..........+.++.++++|+.+++.+++.+.|.+.+       ++++|++||..+.. +.+     
T Consensus        78 ~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------~~~iv~~ss~~~~~~~~~-----  145 (238)
T PRK05786         78 VLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKE-------GSSIVLVSSMSGIYKASP-----  145 (238)
T ss_pred             HhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhc-------CCEEEEEecchhcccCCC-----
Confidence            88899999999987544332233888999999999999999999999865       57999999987643 222     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHHH
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGA  263 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~eva  263 (313)
                                ....|+++|++++.++++++.++...|  |++++|+||++.|++.....+. .. .. ......++++++
T Consensus       146 ----------~~~~Y~~sK~~~~~~~~~~~~~~~~~g--i~v~~i~pg~v~~~~~~~~~~~-~~-~~-~~~~~~~~~~va  210 (238)
T PRK05786        146 ----------DQLSYAVAKAGLAKAVEILASELLGRG--IRVNGIAPTTISGDFEPERNWK-KL-RK-LGDDMAPPEDFA  210 (238)
T ss_pred             ----------CchHHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCccCCCCCchhhhh-hh-cc-ccCCCCCHHHHH
Confidence                      456899999999999999999999888  9999999999999864322111 00 00 011246899999


Q ss_pred             HHHHHHHccCCccCCCceeecCCcccC
Q 021391          264 ATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       264 ~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      +.++++++ +....++|+++..++...
T Consensus       211 ~~~~~~~~-~~~~~~~g~~~~~~~~~~  236 (238)
T PRK05786        211 KVIIWLLT-DEADWVDGVVIPVDGGAR  236 (238)
T ss_pred             HHHHHHhc-ccccCccCCEEEECCccc
Confidence            99999997 667789999888776543

>PRK09135 pteridine reductase; Provisional

Probab=99.98  E-value=1.5e-30  Score=228.86  Aligned_cols=238  Identities=17%  Similarity=0.211  Sum_probs=187.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc-hhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM-AAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      .++++++|||||+++||++++++|+++|++|++++|+. +..+...+.+.... +..+.++.+|+++.+++..+++++.+
T Consensus         3 ~~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~   81 (249)
T PRK09135          3 TDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALR-PGSAAALQADLLDPDALPELVAACVA   81 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc-CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            35779999999999999999999999999999999864 44555555554332 34688999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          105 QGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      .++++|++|||+|..... . +.+.++++.++++|+.+++.+++++.|.+.+.      .+.+++++|..+..+.+    
T Consensus        82 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~----  151 (249)
T PRK09135         82 AFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ------RGAIVNITDIHAERPLK----  151 (249)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC------CeEEEEEeChhhcCCCC----
Confidence            999999999999975432 2 55678899999999999999999999998762      57888888766544433    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc---chhHhHHHHHHHhhcCCh
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN---GILRGFCNTVGKLVLKNI  259 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~  259 (313)
                                 +...|++||++++.++++++.++.+ +  |++++++||++.|+.....   ..........+.....++
T Consensus       152 -----------~~~~Y~~sK~~~~~~~~~l~~~~~~-~--i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (249)
T PRK09135        152 -----------GYPVYCAAKAALEMLTRSLALELAP-E--VRVNAVAPGAILWPEDGNSFDEEARQAILARTPLKRIGTP  217 (249)
T ss_pred             -----------CchhHHHHHHHHHHHHHHHHHHHCC-C--CeEEEEEeccccCccccccCCHHHHHHHHhcCCcCCCcCH
Confidence                       6778999999999999999999965 5  9999999999999975431   111112222222345689


Q ss_pred             HHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          260 PQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       260 ~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      +|+++++.+++. + ....+|+.+..+++..
T Consensus       218 ~d~a~~~~~~~~-~-~~~~~g~~~~i~~g~~  246 (249)
T PRK09135        218 EDIAEAVRFLLA-D-ASFITGQILAVDGGRS  246 (249)
T ss_pred             HHHHHHHHHHcC-c-cccccCcEEEECCCee
Confidence            999999999986 3 4567999888765543

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.98  E-value=9.8e-31  Score=230.92  Aligned_cols=238  Identities=25%  Similarity=0.258  Sum_probs=194.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      +|++|||||+++||++++++|+++|++|++++|+.+..+...+++...  +.++.++.+|+++.++++++++++.+.+++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDA--GGSVIYLVADVTKEDEIADMIAAAAAEFGG   78 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            579999999999999999999999999999999987777766665443  457889999999999999999999998889


Q ss_pred             eeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          109 LNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       109 id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                      +|++|||+|.....  .+.+.+++++++++|+.+++.+++.+.+.|.+     ...+++|++||..+..+.+        
T Consensus        79 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~-----~~~~~~v~~ss~~~~~~~~--------  145 (255)
T TIGR01963        79 LDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKK-----QGWGRIINIASAHGLVASP--------  145 (255)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-----cCCeEEEEEcchhhcCCCC--------
Confidence            99999999976432  25677889999999999999999999999987     3467999999988776655        


Q ss_pred             CCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc---------hhHh-----HHHHHH
Q 021391          187 NDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG---------ILRG-----FCNTVG  252 (313)
Q Consensus       187 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~---------~~~~-----~~~~~~  252 (313)
                             ....|+.+|++++.++++++.++.+.+  |+++.++||.+.|++.....         ....     .....+
T Consensus       146 -------~~~~y~~sk~a~~~~~~~~~~~~~~~~--i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (255)
T TIGR01963       146 -------FKSAYVAAKHGLIGLTKVLALEVAAHG--ITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQP  216 (255)
T ss_pred             -------CCchhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCc
Confidence                   567899999999999999999998888  99999999999988643210         0000     000111


Q ss_pred             HhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          253 KLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       253 ~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      .....+++|+|++++++++ +....++|+++..+++..+
T Consensus       217 ~~~~~~~~d~a~~~~~~~~-~~~~~~~g~~~~~~~g~~~  254 (255)
T TIGR01963       217 TKRFVTVDEVAETALFLAS-DAAAGITGQAIVLDGGWTA  254 (255)
T ss_pred             cccCcCHHHHHHHHHHHcC-ccccCccceEEEEcCcccc
Confidence            2236789999999999997 4456789999888776654

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.98  E-value=9.9e-31  Score=233.97  Aligned_cols=213  Identities=23%  Similarity=0.271  Sum_probs=175.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      |++|||||++|||++++++|+++|++|++++|+.+..+...    .    .++.++.+|+++.+++.++++++.+.++++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~----~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   73 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA----A----AGFTAVQLDVNDGAALARLAEELEAEHGGL   73 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----H----CCCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            79999999999999999999999999999999976654432    1    246788999999999999999999999999


Q ss_pred             eEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCC
Q 021391          110 NILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIN  187 (313)
Q Consensus       110 d~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  187 (313)
                      |++|||+|.....  .+.+.+++++.+++|+.+++.++++++|.|.+.      .++||++||..+..+.+         
T Consensus        74 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------~g~iv~isS~~~~~~~~---------  138 (274)
T PRK05693         74 DVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS------RGLVVNIGSVSGVLVTP---------  138 (274)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc------CCEEEEECCccccCCCC---------
Confidence            9999999976432  267889999999999999999999999999762      47999999998877655         


Q ss_pred             CCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhH--------hH---HHHH-----
Q 021391          188 DESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILR--------GF---CNTV-----  251 (313)
Q Consensus       188 ~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~--------~~---~~~~-----  251 (313)
                            ....|+++|++++.++++++.|+++.|  |+|++|+||+++|++........        .+   ....     
T Consensus       139 ------~~~~Y~~sK~al~~~~~~l~~e~~~~g--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (274)
T PRK05693        139 ------FAGAYCASKAAVHALSDALRLELAPFG--VQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARAR  210 (274)
T ss_pred             ------CccHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHH
Confidence                  567899999999999999999999999  99999999999999866431100        00   0000     


Q ss_pred             -HHhhcCChHHHHHHHHHHHccC
Q 021391          252 -GKLVLKNIPQGAATTCYVALHP  273 (313)
Q Consensus       252 -~~~~~~~~~eva~~~~~l~~~~  273 (313)
                       ......+|+++|+.++..+..+
T Consensus       211 ~~~~~~~~~~~~a~~i~~~~~~~  233 (274)
T PRK05693        211 ASQDNPTPAAEFARQLLAAVQQS  233 (274)
T ss_pred             hccCCCCCHHHHHHHHHHHHhCC
Confidence             0112357999999999888643

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.3e-30  Score=228.96  Aligned_cols=209  Identities=21%  Similarity=0.220  Sum_probs=178.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      |+++||||++|||++++++|+++|++|++++|+.++.++..+++... ++.++.++++|++++++++++++++.+   .+
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~   77 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRAR-GAVAVSTHELDILDTASHAAFLDSLPA---LP   77 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHh-cCCeEEEEecCCCChHHHHHHHHHHhh---cC
Confidence            78999999999999999999999999999999998887777766553 245789999999999999999998754   46


Q ss_pred             eEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCC
Q 021391          110 NILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIN  187 (313)
Q Consensus       110 d~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  187 (313)
                      |++|||+|......  +.+.+++.+.+++|+.+++++++++.|.|.+     ++.+++|++||..+..+.+         
T Consensus        78 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~~iv~~sS~~~~~~~~---------  143 (243)
T PRK07102         78 DIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEA-----RGSGTIVGISSVAGDRGRA---------  143 (243)
T ss_pred             CEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh-----CCCCEEEEEecccccCCCC---------
Confidence            99999999764422  5677888899999999999999999999987     4478999999988776655         


Q ss_pred             CCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHHHHHHH
Q 021391          188 DESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGAATTC  267 (313)
Q Consensus       188 ~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~eva~~~~  267 (313)
                            ....|+++|+++++++++++.++.+.|  |+|++|+||+++|++.....+        +.....+|+++++.++
T Consensus       144 ------~~~~Y~~sK~a~~~~~~~l~~el~~~g--i~v~~v~pg~v~t~~~~~~~~--------~~~~~~~~~~~a~~i~  207 (243)
T PRK07102        144 ------SNYVYGSAKAALTAFLSGLRNRLFKSG--VHVLTVKPGFVRTPMTAGLKL--------PGPLTAQPEEVAKDIF  207 (243)
T ss_pred             ------CCcccHHHHHHHHHHHHHHHHHhhccC--cEEEEEecCcccChhhhccCC--------CccccCCHHHHHHHHH
Confidence                  567899999999999999999999999  999999999999997554321        2233578999999999


Q ss_pred             HHHcc
Q 021391          268 YVALH  272 (313)
Q Consensus       268 ~l~~~  272 (313)
                      .++..
T Consensus       208 ~~~~~  212 (243)
T PRK07102        208 RAIEK  212 (243)
T ss_pred             HHHhC
Confidence            99974

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.98  E-value=1.5e-30  Score=227.58  Aligned_cols=189  Identities=28%  Similarity=0.355  Sum_probs=169.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      -+..+|.|+|||+-+|+|+.+|++|.++|++|+..+.+++..+.+..+..    .++...+++|+|++++|+++.+.+.+
T Consensus        25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~----s~rl~t~~LDVT~~esi~~a~~~V~~  100 (322)
T KOG1610|consen   25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK----SPRLRTLQLDVTKPESVKEAAQWVKK  100 (322)
T ss_pred             cccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc----CCcceeEeeccCCHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999988877776655443    45788899999999999999998877


Q ss_pred             cC--CCeeEEEEcccCCCCC--C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccC
Q 021391          105 QG--RPLNILINNAGIMASP--F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSE  179 (313)
Q Consensus       105 ~~--g~id~lv~~ag~~~~~--~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~  179 (313)
                      ..  .++-.||||||+....  . -.+.+++++.+++|++|++.++++++|.++++      .||||++||++|..+.| 
T Consensus       101 ~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~a------rGRvVnvsS~~GR~~~p-  173 (322)
T KOG1610|consen  101 HLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRA------RGRVVNVSSVLGRVALP-  173 (322)
T ss_pred             hcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhc------cCeEEEecccccCccCc-
Confidence            54  3699999999976542  2 57889999999999999999999999999985      79999999999999888 


Q ss_pred             CCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccc
Q 021391          180 GIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY  240 (313)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~  240 (313)
                                    ...+|++||+|++.++.++.+|+.+.|  |.|..|.||..+|++...
T Consensus       174 --------------~~g~Y~~SK~aVeaf~D~lR~EL~~fG--V~VsiiePG~f~T~l~~~  218 (322)
T KOG1610|consen  174 --------------ALGPYCVSKFAVEAFSDSLRRELRPFG--VKVSIIEPGFFKTNLANP  218 (322)
T ss_pred             --------------ccccchhhHHHHHHHHHHHHHHHHhcC--cEEEEeccCccccccCCh
Confidence                          778999999999999999999999999  999999999999999873

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.5e-30  Score=231.15  Aligned_cols=218  Identities=25%  Similarity=0.254  Sum_probs=182.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      ++++|||||++|||+++++.|+++|++|++++|+..+.++..+++...  +.++.++.+|++|.+++..+++++.+++++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   78 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH--GGEALVVPTDVSDAEACERLIEAAVARFGG   78 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            478999999999999999999999999999999988877777666554  457889999999999999999999999999


Q ss_pred             eeEEEEcccCCCCCC--cc-CccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCC
Q 021391          109 LNILINNAGIMASPF--ML-SKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDK  185 (313)
Q Consensus       109 id~lv~~ag~~~~~~--~~-~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  185 (313)
                      +|++|||+|......  +. +.+.+++.+++|+.+++++++.+.|.|.+     + .++||++||..+..+.+       
T Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-----~-~~~iv~~sS~~~~~~~~-------  145 (263)
T PRK06181         79 IDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKA-----S-RGQIVVVSSLAGLTGVP-------  145 (263)
T ss_pred             CCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-----c-CCEEEEEecccccCCCC-------
Confidence            999999999765432  45 77889999999999999999999999876     2 57999999988876655       


Q ss_pred             CCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc-hhHhHHH--HHHHhhcCChHHH
Q 021391          186 INDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG-ILRGFCN--TVGKLVLKNIPQG  262 (313)
Q Consensus       186 ~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~-~~~~~~~--~~~~~~~~~~~ev  262 (313)
                              +...|+++|++++.++++++.++.+.|  |++++|.||++.|++..... .......  ........+|+|+
T Consensus       146 --------~~~~Y~~sK~~~~~~~~~l~~~~~~~~--i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  215 (263)
T PRK06181        146 --------TRSGYAASKHALHGFFDSLRIELADDG--VAVTVVCPGFVATDIRKRALDGDGKPLGKSPMQESKIMSAEEC  215 (263)
T ss_pred             --------CccHHHHHHHHHHHHHHHHHHHhhhcC--ceEEEEecCccccCcchhhccccccccccccccccCCCCHHHH
Confidence                    677899999999999999999999988  99999999999999765320 0000000  0111246799999


Q ss_pred             HHHHHHHHc
Q 021391          263 AATTCYVAL  271 (313)
Q Consensus       263 a~~~~~l~~  271 (313)
                      |+.+++++.
T Consensus       216 a~~i~~~~~  224 (263)
T PRK06181        216 AEAILPAIA  224 (263)
T ss_pred             HHHHHHHhh
Confidence            999999997

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.97  E-value=3e-30  Score=225.54  Aligned_cols=232  Identities=29%  Similarity=0.364  Sum_probs=191.8

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEecCc-hhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCee
Q 021391           32 AIVTGASSGIGTETARVLALRGVHVIMAVRNM-AAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLN  110 (313)
Q Consensus        32 ~lItGas~giG~aia~~La~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~id  110 (313)
                      +||||++++||.+++++|+++|++|++++|+. +..+...+.+...  +.++.++.+|++|+++++++++++.++++++|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   78 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAY--GVKALGVVCDVSDREDVKAVVEEIEEELGPID   78 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            58999999999999999999999999999875 4445555555443  45688999999999999999999999999999


Q ss_pred             EEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCC
Q 021391          111 ILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIND  188 (313)
Q Consensus       111 ~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~  188 (313)
                      ++||++|.....  .+.+.+.++..+++|+.+++.+++.+.+.+.+     ...+++|++||.++..+.+          
T Consensus        79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~~~v~~sS~~~~~g~~----------  143 (239)
T TIGR01830        79 ILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIK-----QRSGRIINISSVVGLMGNA----------  143 (239)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-----cCCeEEEEECCccccCCCC----------
Confidence            999999976442  26677889999999999999999999999976     3467999999998887766          


Q ss_pred             CCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHHHHHHhhcCChHHHHHHH
Q 021391          189 ESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCNTVGKLVLKNIPQGAATT  266 (313)
Q Consensus       189 ~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~eva~~~  266 (313)
                           ....|+++|++++.+++.++.++...|  +++++++||+++|++.....  +...+....+..+..+++|+++.+
T Consensus       144 -----~~~~y~~~k~a~~~~~~~l~~~~~~~g--~~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  216 (239)
T TIGR01830       144 -----GQANYAASKAGVIGFTKSLAKELASRN--ITVNAVAPGFIDTDMTDKLSEKVKKKILSQIPLGRFGTPEEVANAV  216 (239)
T ss_pred             -----CCchhHHHHHHHHHHHHHHHHHHhhcC--eEEEEEEECCCCChhhhhcChHHHHHHHhcCCcCCCcCHHHHHHHH
Confidence                 577899999999999999999999888  99999999999988754332  111222233344567899999999


Q ss_pred             HHHHccCCccCCCceeecCCcc
Q 021391          267 CYVALHPQVQGVSGEYFSDSNI  288 (313)
Q Consensus       267 ~~l~~~~~~~~~tG~~~~~~~~  288 (313)
                      ++++. +...+.+|++++.+++
T Consensus       217 ~~~~~-~~~~~~~g~~~~~~~g  237 (239)
T TIGR01830       217 AFLAS-DEASYITGQVIHVDGG  237 (239)
T ss_pred             HHHhC-cccCCcCCCEEEeCCC
Confidence            99997 5667899998887654

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.6e-30  Score=223.45  Aligned_cols=225  Identities=22%  Similarity=0.258  Sum_probs=187.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      +.+++++++||||+|+||++++++|+++|++|++++|+.+..++..+++...   .+++++.+|+++.+++..+++++.+
T Consensus         2 ~~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   78 (237)
T PRK07326          2 MSLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK---GNVLGLAADVRDEADVQRAVDAIVA   78 (237)
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc---CcEEEEEccCCCHHHHHHHHHHHHH
Confidence            4467899999999999999999999999999999999988877777766542   4688999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          105 QGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      .++++|++||++|.....  .+.+.+++++.+++|+.+++.+++++++.+.+      ..++||++||..+..+.+    
T Consensus        79 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~------~~~~iv~~ss~~~~~~~~----  148 (237)
T PRK07326         79 AFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKR------GGGYIINISSLAGTNFFA----  148 (237)
T ss_pred             HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHH------CCeEEEEECChhhccCCC----
Confidence            999999999999976442  26788889999999999999999999999843      257999999988765544    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHH
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQG  262 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~ev  262 (313)
                                 ....|+++|++++.+++.++.++.+.|  +++++|+||++.|++........       .....+++|+
T Consensus       149 -----------~~~~y~~sk~a~~~~~~~~~~~~~~~g--i~v~~v~pg~~~t~~~~~~~~~~-------~~~~~~~~d~  208 (237)
T PRK07326        149 -----------GGAAYNASKFGLVGFSEAAMLDLRQYG--IKVSTIMPGSVATHFNGHTPSEK-------DAWKIQPEDI  208 (237)
T ss_pred             -----------CCchHHHHHHHHHHHHHHHHHHhcccC--cEEEEEeeccccCcccccccchh-------hhccCCHHHH
Confidence                       567899999999999999999999888  99999999999998754432110       1123689999


Q ss_pred             HHHHHHHHccCCccCCCceee
Q 021391          263 AATTCYVALHPQVQGVSGEYF  283 (313)
Q Consensus       263 a~~~~~l~~~~~~~~~tG~~~  283 (313)
                      ++.++++++.+ ...+.+++.
T Consensus       209 a~~~~~~l~~~-~~~~~~~~~  228 (237)
T PRK07326        209 AQLVLDLLKMP-PRTLPSKIE  228 (237)
T ss_pred             HHHHHHHHhCC-ccccccceE
Confidence            99999999844 444444443

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.7e-30  Score=229.78  Aligned_cols=217  Identities=25%  Similarity=0.280  Sum_probs=177.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      .|++|||||+||||++++++|+++|++|++++|+.+..++..+..     +.++.++.+|++|.++++++++++.+.+++
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY-----GDRLWVLQLDVTDSAAVRAVVDRAFAALGR   76 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            478999999999999999999999999999999976655543332     346889999999999999999999888899


Q ss_pred             eeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          109 LNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       109 id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                      +|+||||+|......  +.+.+++++.+++|+.++++++++++|+|.+     ...++||++||..+..+.|        
T Consensus        77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~-----~~~~~iv~~sS~~~~~~~~--------  143 (276)
T PRK06482         77 IDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRR-----QGGGRIVQVSSEGGQIAYP--------  143 (276)
T ss_pred             CCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-----cCCCEEEEEcCcccccCCC--------
Confidence            999999999875432  5677889999999999999999999999987     3467999999988766555        


Q ss_pred             CCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc-------h----hHhHHHHHHHh-
Q 021391          187 NDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG-------I----LRGFCNTVGKL-  254 (313)
Q Consensus       187 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~-------~----~~~~~~~~~~~-  254 (313)
                             +...|++||++++.++++++.++.+.|  |+++.++||.+.|++.....       +    ...+...+... 
T Consensus       144 -------~~~~Y~~sK~a~~~~~~~l~~~~~~~g--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (276)
T PRK06482        144 -------GFSLYHATKWGIEGFVEAVAQEVAPFG--IEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGS  214 (276)
T ss_pred             -------CCchhHHHHHHHHHHHHHHHHHhhccC--cEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhcc
Confidence                   678999999999999999999999888  99999999999888754321       0    11111121111 


Q ss_pred             --hcCChHHHHHHHHHHHcc
Q 021391          255 --VLKNIPQGAATTCYVALH  272 (313)
Q Consensus       255 --~~~~~~eva~~~~~l~~~  272 (313)
                        ...++++++++++..+..
T Consensus       215 ~~~~~d~~~~~~a~~~~~~~  234 (276)
T PRK06482        215 FAIPGDPQKMVQAMIASADQ  234 (276)
T ss_pred             CCCCCCHHHHHHHHHHHHcC
Confidence              125799999999999863

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.6e-30  Score=259.40  Aligned_cols=215  Identities=26%  Similarity=0.250  Sum_probs=185.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      +++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|.++++++++++.+.
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~  445 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAK--GGTAHAYTCDLTDSAAVDHTVKDILAE  445 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHh
Confidence            578999999999999999999999999999999999998888887777654  457899999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCCCC--cc--CccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          106 GRPLNILINNAGIMASPF--ML--SKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~--~~--~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      +|++|++|||||......  +.  ..+++++++++|+.+++.+++.++|.|.+     +..++||++||.++..+.+   
T Consensus       446 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-----~~~g~iv~isS~~~~~~~~---  517 (657)
T PRK07201        446 HGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRE-----RRFGHVVNVSSIGVQTNAP---  517 (657)
T ss_pred             cCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhh-----cCCCEEEEECChhhcCCCC---
Confidence            999999999999754322  11  24689999999999999999999999987     4468999999998877665   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHH
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQ  261 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~e  261 (313)
                                  ....|++||++++.++++++.|+.++|  |+||+|+||+++|++.......       ......+|++
T Consensus       518 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~v~pg~v~T~~~~~~~~~-------~~~~~~~~~~  576 (657)
T PRK07201        518 ------------RFSAYVASKAALDAFSDVAASETLSDG--ITFTTIHMPLVRTPMIAPTKRY-------NNVPTISPEE  576 (657)
T ss_pred             ------------CcchHHHHHHHHHHHHHHHHHHHHhhC--CcEEEEECCcCcccccCccccc-------cCCCCCCHHH
Confidence                        677899999999999999999999998  9999999999999987643111       1122468999


Q ss_pred             HHHHHHHHHc
Q 021391          262 GAATTCYVAL  271 (313)
Q Consensus       262 va~~~~~l~~  271 (313)
                      +|+.++..+.
T Consensus       577 ~a~~i~~~~~  586 (657)
T PRK07201        577 AADMVVRAIV  586 (657)
T ss_pred             HHHHHHHHHH
Confidence            9999998775

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.97  E-value=2.2e-30  Score=226.45  Aligned_cols=192  Identities=29%  Similarity=0.387  Sum_probs=170.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      +-.|+|++|||||+|||++.|++||++|++|++++|+.++++.+.+||.+++. ..+..+.+|+++.+++-+-+.+... 
T Consensus        46 ~~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~-vev~~i~~Dft~~~~~ye~i~~~l~-  123 (312)
T KOG1014|consen   46 EKLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK-VEVRIIAIDFTKGDEVYEKLLEKLA-  123 (312)
T ss_pred             HhcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC-cEEEEEEEecCCCchhHHHHHHHhc-
Confidence            34569999999999999999999999999999999999999999999999885 8899999999999873332222222 


Q ss_pred             CCCeeEEEEcccCCCC-C--C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          106 GRPLNILINNAGIMAS-P--F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~-~--~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      ...|.+||||+|.... |  + +.+.+.++..+++|..+...+++.++|.|.+     +++|-||+++|.++..+.|   
T Consensus       124 ~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~-----r~~G~IvnigS~ag~~p~p---  195 (312)
T KOG1014|consen  124 GLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVE-----RKKGIIVNIGSFAGLIPTP---  195 (312)
T ss_pred             CCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhc-----CCCceEEEeccccccccCh---
Confidence            2368999999998763 2  2 6667789999999999999999999999998     6799999999999999988   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN  241 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~  241 (313)
                                  .++.|+++|+.+..++++|..|+..+|  |.|-++.|..|.|+|....
T Consensus       196 ------------~~s~ysasK~~v~~~S~~L~~Ey~~~g--I~Vq~v~p~~VaTkm~~~~  241 (312)
T KOG1014|consen  196 ------------LLSVYSASKAFVDFFSRCLQKEYESKG--IFVQSVIPYLVATKMAKYR  241 (312)
T ss_pred             ------------hHHHHHHHHHHHHHHHHHHHHHHHhcC--eEEEEeehhheeccccccC
Confidence                        789999999999999999999999999  9999999999999987643

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.4e-30  Score=225.10  Aligned_cols=216  Identities=25%  Similarity=0.308  Sum_probs=171.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHH-HhhcC--
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASE-YNSQG--  106 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~-~~~~~--  106 (313)
                      +++|||||++|||++++++|+++|++|++++|+.+..  .    .. ..+.++.++.+|+++.+++++++++ +.+.+  
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~----~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   74 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L----AA-AAGERLAEVELDLSDAAAAAAWLAGDLLAAFVD   74 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h----hh-ccCCeEEEEEeccCCHHHHHHHHHHHHHHHhcc
Confidence            4799999999999999999999999999999986531  1    11 1245788999999999999998877 55443  


Q ss_pred             -CCeeEEEEcccCCCC--CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          107 -RPLNILINNAGIMAS--PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       107 -g~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                       +++|++|||+|....  +. +.+.+++++.+++|+.+++.+++.+.+.|.+     +..++||++||..+..+.+    
T Consensus        75 ~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~~iv~isS~~~~~~~~----  145 (243)
T PRK07023         75 GASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASD-----AAERRILHISSGAARNAYA----  145 (243)
T ss_pred             CCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhc-----cCCCEEEEEeChhhcCCCC----
Confidence             479999999997643  22 5678899999999999999999999999987     4468999999998876655    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--------chhHhHHHHHHHh
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--------GILRGFCNTVGKL  254 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--------~~~~~~~~~~~~~  254 (313)
                                 ++..|+++|++++.+++.++.+ .+.|  |++|+|+||+++|++....        .....+....+..
T Consensus       146 -----------~~~~Y~~sK~a~~~~~~~~~~~-~~~~--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (243)
T PRK07023        146 -----------GWSVYCATKAALDHHARAVALD-ANRA--LRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKASG  211 (243)
T ss_pred             -----------CchHHHHHHHHHHHHHHHHHhc-CCCC--cEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhcC
Confidence                       6789999999999999999999 7778  9999999999999875421        0111223333445


Q ss_pred             hcCChHHHHHHHHHHHccCCc
Q 021391          255 VLKNIPQGAATTCYVALHPQV  275 (313)
Q Consensus       255 ~~~~~~eva~~~~~l~~~~~~  275 (313)
                      +..+|+|+|+.++.++.++..
T Consensus       212 ~~~~~~~va~~~~~~l~~~~~  232 (243)
T PRK07023        212 ALSTPEDAARRLIAYLLSDDF  232 (243)
T ss_pred             CCCCHHHHHHHHHHHHhcccc
Confidence            678999999965544443543

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.2e-30  Score=225.01  Aligned_cols=202  Identities=25%  Similarity=0.249  Sum_probs=169.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      ++++||||++|||++++++|+++|++|++++|+.+..++..+    .  ..++.++++|+++.++++++++++..   .+
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~----~--~~~~~~~~~D~~~~~~~~~~~~~~~~---~~   72 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHT----Q--SANIFTLAFDVTDHPGTKAALSQLPF---IP   72 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----h--cCCCeEEEeeCCCHHHHHHHHHhccc---CC
Confidence            789999999999999999999999999999999776554432    2  34688999999999999999987642   47


Q ss_pred             eEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCC
Q 021391          110 NILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIN  187 (313)
Q Consensus       110 d~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  187 (313)
                      |++|||+|.....  .+.+.+++++++++|+.+++++++.+.|.|.+       +++||++||..+..+.+         
T Consensus        73 d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~~~iv~isS~~~~~~~~---------  136 (240)
T PRK06101         73 ELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC-------GHRVVIVGSIASELALP---------  136 (240)
T ss_pred             CEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc-------CCeEEEEechhhccCCC---------
Confidence            9999999865321  24677889999999999999999999999965       56899999998887766         


Q ss_pred             CCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHHHHHHH
Q 021391          188 DESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGAATTC  267 (313)
Q Consensus       188 ~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~eva~~~~  267 (313)
                            ....|+++|+++++++++++.|+.++|  |++++++||+++|++.....+.        .....+++++|+.++
T Consensus       137 ------~~~~Y~asK~a~~~~~~~l~~e~~~~g--i~v~~v~pg~i~t~~~~~~~~~--------~~~~~~~~~~a~~i~  200 (240)
T PRK06101        137 ------RAEAYGASKAAVAYFARTLQLDLRPKG--IEVVTVFPGFVATPLTDKNTFA--------MPMIITVEQASQEIR  200 (240)
T ss_pred             ------CCchhhHHHHHHHHHHHHHHHHHHhcC--ceEEEEeCCcCCCCCcCCCCCC--------CCcccCHHHHHHHHH
Confidence                  667899999999999999999999999  9999999999999986643211        112357999999999


Q ss_pred             HHHcc
Q 021391          268 YVALH  272 (313)
Q Consensus       268 ~l~~~  272 (313)
                      ..+..
T Consensus       201 ~~i~~  205 (240)
T PRK06101        201 AQLAR  205 (240)
T ss_pred             HHHhc
Confidence            88863

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=4.9e-30  Score=211.43  Aligned_cols=183  Identities=27%  Similarity=0.314  Sum_probs=163.6

Q ss_pred             CCCEEEEeCCC-CchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh-c
Q 021391           28 TGLTAIVTGAS-SGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS-Q  105 (313)
Q Consensus        28 ~gk~~lItGas-~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~-~  105 (313)
                      +.|.+||||++ ||||.+++++|+++|+.|+.+.|..+...++..       ..++....+|++++++|..+-.++.. .
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~-------~~gl~~~kLDV~~~~~V~~v~~evr~~~   78 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAI-------QFGLKPYKLDVSKPEEVVTVSGEVRANP   78 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHH-------hhCCeeEEeccCChHHHHHHHHHHhhCC
Confidence            45888998887 899999999999999999999999877665543       23588899999999999999999988 7


Q ss_pred             CCCeeEEEEcccCCCC-CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          106 GRPLNILINNAGIMAS-PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~-~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      +|.+|+|+||||..-. |. +.+.+..+..+++|++|+++++|++-..+.+.      +|.||+++|.++..++|     
T Consensus        79 ~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lika------KGtIVnvgSl~~~vpfp-----  147 (289)
T KOG1209|consen   79 DGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKA------KGTIVNVGSLAGVVPFP-----  147 (289)
T ss_pred             CCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHc------cceEEEecceeEEeccc-----
Confidence            8999999999997532 33 88999999999999999999999999777763      89999999999999988     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccc
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY  240 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~  240 (313)
                                ..+.|.+||+|++.+++.|..|+++.|  |+|..+.||.|.|++...
T Consensus       148 ----------f~~iYsAsKAAihay~~tLrlEl~PFg--v~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  148 ----------FGSIYSASKAAIHAYARTLRLELKPFG--VRVINAITGGVATDIADK  192 (289)
T ss_pred             ----------hhhhhhHHHHHHHHhhhhcEEeeeccc--cEEEEecccceecccccC
Confidence                      678999999999999999999999999  999999999999998765

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.8e-28  Score=213.08  Aligned_cols=200  Identities=24%  Similarity=0.276  Sum_probs=163.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      |+++||||++|||++++++|+++|++|++++|+.+..++.. +      ..++.++.+|++|+++++++++++..  +++
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~------~~~~~~~~~D~~d~~~~~~~~~~~~~--~~i   72 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ-A------LPGVHIEKLDMNDPASLDQLLQRLQG--QRF   72 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH-h------ccccceEEcCCCCHHHHHHHHHHhhc--CCC
Confidence            78999999999999999999999999999999987654432 1      12567889999999999999998854  479


Q ss_pred             eEEEEcccCCCC---C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCC
Q 021391          110 NILINNAGIMAS---P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDK  185 (313)
Q Consensus       110 d~lv~~ag~~~~---~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  185 (313)
                      |++|||+|+...   + .+.+.+++++.+++|+.+++.+++.+.|.+.+     . .+.++++||..+..+.+.      
T Consensus        73 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~-~~~iv~~ss~~g~~~~~~------  140 (225)
T PRK08177         73 DLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRP-----G-QGVLAFMSSQLGSVELPD------  140 (225)
T ss_pred             CEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhh-----c-CCEEEEEccCccccccCC------
Confidence            999999998643   2 26677889999999999999999999999875     1 478999999776543321      


Q ss_pred             CCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHHHHH
Q 021391          186 INDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGAAT  265 (313)
Q Consensus       186 ~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~eva~~  265 (313)
                            ...+..|+++|++++.++++++.++.++|  |+||+|+||+++|++.....             ..++++.+..
T Consensus       141 ------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~--i~v~~i~PG~i~t~~~~~~~-------------~~~~~~~~~~  199 (225)
T PRK08177        141 ------GGEMPLYKASKAALNSMTRSFVAELGEPT--LTVLSMHPGWVKTDMGGDNA-------------PLDVETSVKG  199 (225)
T ss_pred             ------CCCccchHHHHHHHHHHHHHHHHHhhcCC--eEEEEEcCCceecCCCCCCC-------------CCCHHHHHHH
Confidence                  11456899999999999999999999988  99999999999999865321             1356777777


Q ss_pred             HHHHHc
Q 021391          266 TCYVAL  271 (313)
Q Consensus       266 ~~~l~~  271 (313)
                      ++..+.
T Consensus       200 ~~~~~~  205 (225)
T PRK08177        200 LVEQIE  205 (225)
T ss_pred             HHHHHH
Confidence            777765

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.96  E-value=4e-29  Score=206.86  Aligned_cols=161  Identities=39%  Similarity=0.493  Sum_probs=146.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecC--chhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           30 LTAIVTGASSGIGTETARVLALRGV-HVIMAVRN--MAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~-~V~l~~r~--~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      |++|||||++|||++++++|+++|. +|++++|+  .+..++..+++...  +.++.++++|++++++++++++++.+.+
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAP--GAKITFIECDLSDPESIRALIEEVIKRF   78 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHT--TSEEEEEESETTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccc--cccccccccccccccccccccccccccc
Confidence            7999999999999999999999966 78899998  67777777777754  5789999999999999999999999999


Q ss_pred             CCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCC
Q 021391          107 RPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFD  184 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  184 (313)
                      +++|++|||+|......  +.+.+++++.+++|+.+++.+.+.+.|  ..       +++||++||.++..+.|      
T Consensus        79 ~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~~-------~g~iv~~sS~~~~~~~~------  143 (167)
T PF00106_consen   79 GPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP--QG-------GGKIVNISSIAGVRGSP------  143 (167)
T ss_dssp             SSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH--HT-------TEEEEEEEEGGGTSSST------
T ss_pred             ccccccccccccccccccccccchhhhhccccccceeeeeeehhee--cc-------ccceEEecchhhccCCC------
Confidence            99999999999887433  677899999999999999999999999  32       78999999999999887      


Q ss_pred             CCCCCCCCCccccchHhHHHHHHHHHHHHHHh
Q 021391          185 KINDESAYNSFGAYGQSKLANILHAKELAKHL  216 (313)
Q Consensus       185 ~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~  216 (313)
                               ++..|+++|+|+.+|+++++.|+
T Consensus       144 ---------~~~~Y~askaal~~~~~~la~e~  166 (167)
T PF00106_consen  144 ---------GMSAYSASKAALRGLTQSLAAEL  166 (167)
T ss_dssp             ---------TBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------CChhHHHHHHHHHHHHHHHHHhc
Confidence                     78899999999999999999986

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.96  E-value=5.6e-28  Score=213.74  Aligned_cols=215  Identities=26%  Similarity=0.271  Sum_probs=170.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      +|++|||||++|||++++++|+++|++|++++|+.+..++..+.....  +.++.++.+|++|++++..++.      ++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~------~~   73 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR--GLALRVEKLDLTDAIDRAQAAE------WD   73 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcceEEEeeCCCHHHHHHHhc------CC
Confidence            589999999999999999999999999999999987766655544333  3468899999999998877654      37


Q ss_pred             eeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          109 LNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       109 id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                      +|+||||+|+....  .+.+.++++..+++|+.+++.+++.+++.+.+     ...++||++||..+..+.+        
T Consensus        74 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~~~iv~~SS~~~~~~~~--------  140 (257)
T PRK09291         74 VDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVA-----RGKGKVVFTSSMAGLITGP--------  140 (257)
T ss_pred             CCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-----cCCceEEEEcChhhccCCC--------
Confidence            99999999986542  26778899999999999999999999999987     3357999999988776554        


Q ss_pred             CCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc-----hh---HhHHHHH---HHhh
Q 021391          187 NDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG-----IL---RGFCNTV---GKLV  255 (313)
Q Consensus       187 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~-----~~---~~~~~~~---~~~~  255 (313)
                             +...|+++|++++.++++++.++.+.|  |++++|+||++.|++.....     +.   .......   ....
T Consensus       141 -------~~~~Y~~sK~a~~~~~~~l~~~~~~~g--i~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (257)
T PRK09291        141 -------FTGAYCASKHALEAIAEAMHAELKPFG--IQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPLE  211 (257)
T ss_pred             -------CcchhHHHHHHHHHHHHHHHHHHHhcC--cEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhcccc
Confidence                   567899999999999999999999999  99999999999998754220     00   0000000   0112


Q ss_pred             cCChHHHHHHHHHHHccC
Q 021391          256 LKNIPQGAATTCYVALHP  273 (313)
Q Consensus       256 ~~~~~eva~~~~~l~~~~  273 (313)
                      ..+++++++.++.++.++
T Consensus       212 ~~~~~~~~~~~~~~l~~~  229 (257)
T PRK09291        212 QFDPQEMIDAMVEVIPAD  229 (257)
T ss_pred             CCCHHHHHHHHHHHhcCC
Confidence            257888988888887643

>PRK08264 short chain dehydrogenase; Validated

Probab=99.96  E-value=8.5e-28  Score=210.31  Aligned_cols=201  Identities=27%  Similarity=0.341  Sum_probs=171.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      |++++|++|||||+|+||+++|++|+++|+ +|++++|+.++.++       .  +.++.++.+|+++.+++.+++++  
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-------~--~~~~~~~~~D~~~~~~~~~~~~~--   70 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-------L--GPRVVPLQLDVTDPASVAAAAEA--   70 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-------c--CCceEEEEecCCCHHHHHHHHHh--
Confidence            668899999999999999999999999999 99999998766443       1  45789999999999999888775  


Q ss_pred             hcCCCeeEEEEcccCCCC--C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          104 SQGRPLNILINNAGIMAS--P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~--~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                        ++++|++||++|....  + .+.+.+++++.+++|+.+++.+++++.|.+.+     ...+++|++||..+..+.+  
T Consensus        71 --~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~~~v~~sS~~~~~~~~--  141 (238)
T PRK08264         71 --ASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAA-----NGGGAIVNVLSVLSWVNFP--  141 (238)
T ss_pred             --cCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-----cCCCEEEEEcChhhccCCC--
Confidence              3679999999998332  2 26678999999999999999999999999987     3468999999988876655  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChH
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIP  260 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  260 (313)
                                   +...|+++|++++.+++.++.++.+.|  |+++++.||.++|++......           ...+++
T Consensus       142 -------------~~~~y~~sK~a~~~~~~~l~~~~~~~~--i~~~~v~pg~v~t~~~~~~~~-----------~~~~~~  195 (238)
T PRK08264        142 -------------NLGTYSASKAAAWSLTQALRAELAPQG--TRVLGVHPGPIDTDMAAGLDA-----------PKASPA  195 (238)
T ss_pred             -------------CchHhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeCCcccccccccCCc-----------CCCCHH
Confidence                         667899999999999999999999988  999999999999998553311           146788


Q ss_pred             HHHHHHHHHHc
Q 021391          261 QGAATTCYVAL  271 (313)
Q Consensus       261 eva~~~~~l~~  271 (313)
                      ++++.++..+.
T Consensus       196 ~~a~~~~~~~~  206 (238)
T PRK08264        196 DVARQILDALE  206 (238)
T ss_pred             HHHHHHHHHHh
Confidence            99999998886

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.96  E-value=8.2e-29  Score=217.66  Aligned_cols=212  Identities=23%  Similarity=0.200  Sum_probs=163.3

Q ss_pred             HHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCeeEEEEcccCCCCCCc
Q 021391           45 TARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFM  124 (313)
Q Consensus        45 ia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~  124 (313)
                      +|++|+++|++|++++|+.++.+             ...++++|++|.+++.++++++.   +++|+||||||+..    
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~-------------~~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~----   60 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT-------------LDGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPG----   60 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh-------------hhHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCC----
Confidence            47899999999999999876532             12367999999999999998874   68999999999752    


Q ss_pred             cCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC-C------CCCC------CCC
Q 021391          125 LSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF-D------KIND------ESA  191 (313)
Q Consensus       125 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~-~------~~~~------~~~  191 (313)
                        .+.+++.+++|+.+++.+++.++|+|.+       +|+||++||.++....+ .... .      +.++      ..+
T Consensus        61 --~~~~~~~~~vN~~~~~~l~~~~~~~~~~-------~g~Iv~isS~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  130 (241)
T PRK12428         61 --TAPVELVARVNFLGLRHLTEALLPRMAP-------GGAIVNVASLAGAEWPQ-RLELHKALAATASFDEGAAWLAAHP  130 (241)
T ss_pred             --CCCHHHhhhhchHHHHHHHHHHHHhccC-------CcEEEEeCcHHhhcccc-chHHHHhhhccchHHHHHHhhhccC
Confidence              2468999999999999999999999865       58999999998763211 0000 0      0000      023


Q ss_pred             CCccccchHhHHHHHHHHHHHH-HHhccCCCcEEEEEeeCcccccCCccccch--hHhHH--HHHHHhhcCChHHHHHHH
Q 021391          192 YNSFGAYGQSKLANILHAKELA-KHLKEDGVNITANSLHPGSIVTNLFRYNGI--LRGFC--NTVGKLVLKNIPQGAATT  266 (313)
Q Consensus       192 ~~~~~~Y~asK~a~~~l~~~la-~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~--~~~~~--~~~~~~~~~~~~eva~~~  266 (313)
                      .++...|++||+|++.+++.++ .+++++|  ||||+|+||.++|++......  .....  ...+..+..+|+|+|+.+
T Consensus       131 ~~~~~~Y~~sK~a~~~~~~~la~~e~~~~g--irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~  208 (241)
T PRK12428        131 VALATGYQLSKEALILWTMRQAQPWFGARG--IRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVL  208 (241)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHHhhhccC--eEEEEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHHHHHHHH
Confidence            4467889999999999999999 9999999  999999999999998654210  01111  112344567999999999


Q ss_pred             HHHHccCCccCCCceeecCCccc
Q 021391          267 CYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       267 ~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      +||++ +.+.+++|+.+..+|+.
T Consensus       209 ~~l~s-~~~~~~~G~~i~vdgg~  230 (241)
T PRK12428        209 VFLCS-DAARWINGVNLPVDGGL  230 (241)
T ss_pred             HHHcC-hhhcCccCcEEEecCch
Confidence            99997 77889999998887654

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.96  E-value=9.4e-28  Score=211.36  Aligned_cols=205  Identities=20%  Similarity=0.140  Sum_probs=152.5

Q ss_pred             hhccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHH
Q 021391           20 EVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFA   99 (313)
Q Consensus        20 ~~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~   99 (313)
                      .++....++||+++||||++|||+++|++|+++|++|++++|+.....+   . ...  . ...++.+|+++.+++++  
T Consensus         5 ~~~~~~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~---~-~~~--~-~~~~~~~D~~~~~~~~~--   75 (245)
T PRK12367          5 DPMAQSTWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE---S-NDE--S-PNEWIKWECGKEESLDK--   75 (245)
T ss_pred             chhhHHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh---h-hcc--C-CCeEEEeeCCCHHHHHH--
Confidence            3455566899999999999999999999999999999999998632111   1 111  1 23678999999987754  


Q ss_pred             HHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccC
Q 021391          100 SEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSE  179 (313)
Q Consensus       100 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~  179 (313)
                           .++++|++|||||+... .+.+.+++++.+++|+.+++++++.++|.|.++..  ..++.+++.+|.++..+ + 
T Consensus        76 -----~~~~iDilVnnAG~~~~-~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~--~~g~~iiv~ss~a~~~~-~-  145 (245)
T PRK12367         76 -----QLASLDVLILNHGINPG-GRQDPENINKALEINALSSWRLLELFEDIALNNNS--QIPKEIWVNTSEAEIQP-A-  145 (245)
T ss_pred             -----hcCCCCEEEECCccCCc-CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccc--CCCeEEEEEecccccCC-C-
Confidence                 34689999999997532 34578899999999999999999999999976310  11334555556554432 1 


Q ss_pred             CCCCCCCCCCCCCCccccchHhHHHHHHHH---HHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhc
Q 021391          180 GIRFDKINDESAYNSFGAYGQSKLANILHA---KELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVL  256 (313)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~---~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~  256 (313)
                                    ....|++||+|+..+.   +.++.|+.+.+  |+|++++||+++|++..              ...
T Consensus       146 --------------~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~--i~v~~~~pg~~~t~~~~--------------~~~  195 (245)
T PRK12367        146 --------------LSPSYEISKRLIGQLVSLKKNLLDKNERKK--LIIRKLILGPFRSELNP--------------IGI  195 (245)
T ss_pred             --------------CCchhHHHHHHHHHHHHHHHHHHHhhcccc--cEEEEecCCCcccccCc--------------cCC
Confidence                          3467999999986543   44444556777  99999999999998632              113


Q ss_pred             CChHHHHHHHHHHHccC
Q 021391          257 KNIPQGAATTCYVALHP  273 (313)
Q Consensus       257 ~~~~eva~~~~~l~~~~  273 (313)
                      .+|+++|+.+++.+..+
T Consensus       196 ~~~~~vA~~i~~~~~~~  212 (245)
T PRK12367        196 MSADFVAKQILDQANLG  212 (245)
T ss_pred             CCHHHHHHHHHHHHhcC
Confidence            57999999999999743

>PRK08017 oxidoreductase; Provisional

Probab=99.96  E-value=2.6e-27  Score=209.33  Aligned_cols=214  Identities=29%  Similarity=0.305  Sum_probs=174.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc-CCC
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ-GRP  108 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~-~g~  108 (313)
                      |+++||||+||||+++++.|+++|++|++++|+.++.+...    .    .++..+.+|++|.+++..+++++... .++
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~----~----~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   74 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN----S----LGFTGILLDLDDPESVERAADEVIALTDNR   74 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH----h----CCCeEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence            78999999999999999999999999999999987655432    1    14678899999999999999988764 368


Q ss_pred             eeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          109 LNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       109 id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                      +|++|||+|.....  .+.+.+++++.+++|+.+++.+++.+.+.+.+     ...++||++||..+..+.+        
T Consensus        75 ~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~-----~~~~~iv~~ss~~~~~~~~--------  141 (256)
T PRK08017         75 LYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLP-----HGEGRIVMTSSVMGLISTP--------  141 (256)
T ss_pred             CeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhh-----cCCCEEEEEcCcccccCCC--------
Confidence            99999999976432  26788899999999999999999999999987     3467999999988776655        


Q ss_pred             CCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchh---HhHH-HHHHHhhcCChHHH
Q 021391          187 NDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGIL---RGFC-NTVGKLVLKNIPQG  262 (313)
Q Consensus       187 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~---~~~~-~~~~~~~~~~~~ev  262 (313)
                             ....|+++|++++.++++++.++.+.|  |++++|+||+++|++.......   .... .........+++|+
T Consensus       142 -------~~~~Y~~sK~~~~~~~~~l~~~~~~~~--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  212 (256)
T PRK08017        142 -------GRGAYAASKYALEAWSDALRMELRHSG--IKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAV  212 (256)
T ss_pred             -------CccHHHHHHHHHHHHHHHHHHHHhhcC--CEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHHHH
Confidence                   567899999999999999999999988  9999999999999876542111   1111 11112235789999


Q ss_pred             HHHHHHHHccC
Q 021391          263 AATTCYVALHP  273 (313)
Q Consensus       263 a~~~~~l~~~~  273 (313)
                      ++.+..++..+
T Consensus       213 a~~~~~~~~~~  223 (256)
T PRK08017        213 VPKLRHALESP  223 (256)
T ss_pred             HHHHHHHHhCC
Confidence            99999999743

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.96  E-value=5.6e-27  Score=203.31  Aligned_cols=212  Identities=24%  Similarity=0.275  Sum_probs=170.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      |+++||||+++||++++++|+++|++|++++|+.+..++..    .    ..+.++.+|+++.++++++++++..  +++
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~----~----~~~~~~~~D~~~~~~v~~~~~~~~~--~~~   71 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ----A----LGAEALALDVADPASVAGLAWKLDG--EAL   71 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH----h----ccceEEEecCCCHHHHHHHHHHhcC--CCC
Confidence            68999999999999999999999999999999976655432    2    1356899999999999998887642  479


Q ss_pred             eEEEEcccCCCC---CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCC
Q 021391          110 NILINNAGIMAS---PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDK  185 (313)
Q Consensus       110 d~lv~~ag~~~~---~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  185 (313)
                      |++|||+|....   +. +.+.+++++.+++|+.+++.+++++.|+|.+      ..+++|+++|..+..+...      
T Consensus        72 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~------~~g~iv~isS~~~~~~~~~------  139 (222)
T PRK06953         72 DAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEA------AGGVLAVLSSRMGSIGDAT------  139 (222)
T ss_pred             CEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhc------cCCeEEEEcCccccccccc------
Confidence            999999998632   22 5588999999999999999999999998865      2578999999877654321      


Q ss_pred             CCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHHHHH
Q 021391          186 INDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGAAT  265 (313)
Q Consensus       186 ~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~eva~~  265 (313)
                            ......|+++|++++.+++.++.++.  +  ++||+|+||+++|++....             ....+++.+..
T Consensus       140 ------~~~~~~Y~~sK~a~~~~~~~~~~~~~--~--i~v~~v~Pg~i~t~~~~~~-------------~~~~~~~~~~~  196 (222)
T PRK06953        140 ------GTTGWLYRASKAALNDALRAASLQAR--H--ATCIALHPGWVRTDMGGAQ-------------AALDPAQSVAG  196 (222)
T ss_pred             ------CCCccccHHhHHHHHHHHHHHhhhcc--C--cEEEEECCCeeecCCCCCC-------------CCCCHHHHHHH
Confidence                  00123699999999999999998864  4  9999999999999986532             12467889999


Q ss_pred             HHHHHccCCccCCCceeecCCc
Q 021391          266 TCYVALHPQVQGVSGEYFSDSN  287 (313)
Q Consensus       266 ~~~l~~~~~~~~~tG~~~~~~~  287 (313)
                      ++.++. ......+|.++.-++
T Consensus       197 ~~~~~~-~~~~~~~~~~~~~~~  217 (222)
T PRK06953        197 MRRVIA-QATRRDNGRFFQYDG  217 (222)
T ss_pred             HHHHHH-hcCcccCceEEeeCC
Confidence            999887 445688999886443

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.95  E-value=2.9e-27  Score=206.53  Aligned_cols=221  Identities=22%  Similarity=0.218  Sum_probs=188.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      +.++|||+|+|||+++|.++..+|++|.++.|+.+++.++.+++.-...-..+.+..+|+.|-+++..+++++...++.+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            68999999999999999999999999999999999999999998765433347899999999999999999999999999


Q ss_pred             eEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCC
Q 021391          110 NILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIN  187 (313)
Q Consensus       110 d~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  187 (313)
                      |.+|+|||...+..  +.+.+.++..+++|+.+.++++++.++.|++.    ..-|+|+++||.++..+..         
T Consensus       114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~----~~~g~I~~vsS~~a~~~i~---------  180 (331)
T KOG1210|consen  114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKR----EHLGRIILVSSQLAMLGIY---------  180 (331)
T ss_pred             ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhcc----ccCcEEEEehhhhhhcCcc---------
Confidence            99999999887654  88999999999999999999999999999983    2246999999999998877         


Q ss_pred             CCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHh-HHHHHH-HhhcCChHHHHHH
Q 021391          188 DESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRG-FCNTVG-KLVLKNIPQGAAT  265 (313)
Q Consensus       188 ~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~-~~~~~~-~~~~~~~~eva~~  265 (313)
                            ++++|+++|+|+.+|+..+.+|+.++|  |.|....|+.++||.......... ....+. .....++|+.|.+
T Consensus       181 ------GysaYs~sK~alrgLa~~l~qE~i~~~--v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii~g~ss~~~~e~~a~~  252 (331)
T KOG1210|consen  181 ------GYSAYSPSKFALRGLAEALRQELIKYG--VHVTLYYPPDTLTPGFERENKTKPEETKIIEGGSSVIKCEEMAKA  252 (331)
T ss_pred             ------cccccccHHHHHHHHHHHHHHHHhhcc--eEEEEEcCCCCCCCccccccccCchheeeecCCCCCcCHHHHHHH
Confidence                  899999999999999999999999999  999999999999996553321111 111111 1224678888888


Q ss_pred             HHHHHc
Q 021391          266 TCYVAL  271 (313)
Q Consensus       266 ~~~l~~  271 (313)
                      ++.=+.
T Consensus       253 ~~~~~~  258 (331)
T KOG1210|consen  253 IVKGMK  258 (331)
T ss_pred             HHhHHh
Confidence            776554

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.95  E-value=1.1e-27  Score=199.77  Aligned_cols=231  Identities=21%  Similarity=0.162  Sum_probs=184.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .+|.+|+||+|+|||..++..+.+++-.....+++....+  .+.+...++ +.......|++...-.+++++..++++|
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~~g-d~~v~~~g~~~e~~~l~al~e~~r~k~g   81 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVAYG-DDFVHVVGDITEEQLLGALREAPRKKGG   81 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEEec-CCcceechHHHHHHHHHHHHhhhhhcCC
Confidence            4578899999999999999999998876555555444333  333333332 4566677888888889999999999999


Q ss_pred             CeeEEEEcccCCCCC---C--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          108 PLNILINNAGIMASP---F--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       108 ~id~lv~~ag~~~~~---~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      ..|++|||||...+.   .  ..+.+.|++.|++|+++++.+.+.++|.++++    .-++.||++||.+...+++    
T Consensus        82 kr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~----p~~~~vVnvSS~aav~p~~----  153 (253)
T KOG1204|consen   82 KRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKS----PVNGNVVNVSSLAAVRPFS----  153 (253)
T ss_pred             ceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCC----CccCeEEEecchhhhcccc----
Confidence            999999999987552   2  56778999999999999999999999999883    1368999999999998877    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--------hhHhHHHHHHHh
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--------ILRGFCNTVGKL  254 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--------~~~~~~~~~~~~  254 (313)
                                 .|++||.+|+|.+++++.||.|=. .+  |++.+++||.++|+|.....        ....+.+.....
T Consensus       154 -----------~wa~yc~~KaAr~m~f~~lA~EEp-~~--v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~  219 (253)
T KOG1204|consen  154 -----------SWAAYCSSKAARNMYFMVLASEEP-FD--VRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESG  219 (253)
T ss_pred             -----------HHHHhhhhHHHHHHHHHHHhhcCc-cc--eeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcC
Confidence                       899999999999999999999877 67  99999999999999976431        111222333445


Q ss_pred             hcCChHHHHHHHHHHHccCCccCCCceeecC
Q 021391          255 VLKNIPQGAATTCYVALHPQVQGVSGEYFSD  285 (313)
Q Consensus       255 ~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~  285 (313)
                      .+.+|...|..+..|+....  +++|++++-
T Consensus       220 ~ll~~~~~a~~l~~L~e~~~--f~sG~~vdy  248 (253)
T KOG1204|consen  220 QLLDPQVTAKVLAKLLEKGD--FVSGQHVDY  248 (253)
T ss_pred             CcCChhhHHHHHHHHHHhcC--ccccccccc
Confidence            67899999999999997432  899998763

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.95  E-value=6.8e-26  Score=196.54  Aligned_cols=209  Identities=22%  Similarity=0.264  Sum_probs=167.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      .|++|||||+++||+++++.|+++ ++|++++|+.+..++..+..      ..++++.+|++|.+++.++++.+    ++
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~----~~   71 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL------PGATPFPVDLTDPEAIAAAVEQL----GR   71 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh------ccceEEecCCCCHHHHHHHHHhc----CC
Confidence            589999999999999999999999 99999999976655443321      24788999999999998887754    47


Q ss_pred             eeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          109 LNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       109 id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                      +|++||++|.....  .+.+.+++.+.+++|+.+++.+.+.+++.+.+.      .+++|++||..+..+.+        
T Consensus        72 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~~~v~~ss~~~~~~~~--------  137 (227)
T PRK08219         72 LDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA------HGHVVFINSGAGLRANP--------  137 (227)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC------CCeEEEEcchHhcCcCC--------
Confidence            99999999976432  256778899999999999999999999998873      57999999988776555        


Q ss_pred             CCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHHHHHH
Q 021391          187 NDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGAATT  266 (313)
Q Consensus       187 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~eva~~~  266 (313)
                             +...|+.+|++++.+++.++.++...   |++++|+||+++|+......  .......+.....+++|+|+.+
T Consensus       138 -------~~~~y~~~K~a~~~~~~~~~~~~~~~---i~~~~i~pg~~~~~~~~~~~--~~~~~~~~~~~~~~~~dva~~~  205 (227)
T PRK08219        138 -------GWGSYAASKFALRALADALREEEPGN---VRVTSVHPGRTDTDMQRGLV--AQEGGEYDPERYLRPETVAKAV  205 (227)
T ss_pred             -------CCchHHHHHHHHHHHHHHHHHHhcCC---ceEEEEecCCccchHhhhhh--hhhccccCCCCCCCHHHHHHHH
Confidence                   56789999999999999999887753   99999999999887644221  1100111223457899999999


Q ss_pred             HHHHccCC
Q 021391          267 CYVALHPQ  274 (313)
Q Consensus       267 ~~l~~~~~  274 (313)
                      +++++++.
T Consensus       206 ~~~l~~~~  213 (227)
T PRK08219        206 RFAVDAPP  213 (227)
T ss_pred             HHHHcCCC
Confidence            99998543

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.93  E-value=9e-25  Score=203.88  Aligned_cols=201  Identities=22%  Similarity=0.171  Sum_probs=150.2

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      ..++++||+++||||++|||++++++|+++|++|++++|+.++.++..   ...  ...+..+.+|++|++++.+.+   
T Consensus       172 ta~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~---~~~--~~~v~~v~~Dvsd~~~v~~~l---  243 (406)
T PRK07424        172 TALSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEI---NGE--DLPVKTLHWQVGQEAALAELL---  243 (406)
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---hhc--CCCeEEEEeeCCCHHHHHHHh---
Confidence            345789999999999999999999999999999999999876554322   111  234678899999998876543   


Q ss_pred             hhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          103 NSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                          +++|++|||||+... .+.+.+++++++++|+.+++.++++++|.|.+.... ..++.+|++|+ ++..+ +    
T Consensus       244 ----~~IDiLInnAGi~~~-~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~-~~~~iiVn~Ss-a~~~~-~----  311 (406)
T PRK07424        244 ----EKVDILIINHGINVH-GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDK-ATKEVWVNTSE-AEVNP-A----  311 (406)
T ss_pred             ----CCCCEEEECCCcCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CCCeEEEEEcc-ccccC-C----
Confidence                479999999997543 356778999999999999999999999999873200 01234566654 33211 1    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHH
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQG  262 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~ev  262 (313)
                                 ..+.|++||+|+..++. +.++.  .+  +.+..++||+++|++..              ....+||++
T Consensus       312 -----------~~~~Y~ASKaAl~~l~~-l~~~~--~~--~~I~~i~~gp~~t~~~~--------------~~~~spe~v  361 (406)
T PRK07424        312 -----------FSPLYELSKRALGDLVT-LRRLD--AP--CVVRKLILGPFKSNLNP--------------IGVMSADWV  361 (406)
T ss_pred             -----------CchHHHHHHHHHHHHHH-HHHhC--CC--CceEEEEeCCCcCCCCc--------------CCCCCHHHH
Confidence                       34579999999999985 44332  34  56677889999988632              113589999


Q ss_pred             HHHHHHHHccC
Q 021391          263 AATTCYVALHP  273 (313)
Q Consensus       263 a~~~~~l~~~~  273 (313)
                      |+.+++++..+
T Consensus       362 A~~il~~i~~~  372 (406)
T PRK07424        362 AKQILKLAKRD  372 (406)
T ss_pred             HHHHHHHHHCC
Confidence            99999999744

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.93  E-value=2e-24  Score=182.60  Aligned_cols=231  Identities=26%  Similarity=0.334  Sum_probs=187.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-----EEEEEecCchhHHHHHHHHHHhCC--CCceEEEEccCCCHHHHHHHHH
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGV-----HVIMAVRNMAAGKDVREAIVKEIP--SAKVDAMELDVSSLASVRKFAS  100 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~-----~V~l~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~s~~~~v~~~~~  100 (313)
                      ..|+++|||+++|||.++|.+|++...     ++++++|+.++++++...+.+.+|  ..++.++.+|+++..|+.++..
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            458999999999999999999998753     589999999999999999999998  5578999999999999999999


Q ss_pred             HHhhcCCCeeEEEEcccCCCCCC-----------------------------ccCccchhhhhhhhhhHHHHHHHHHHHH
Q 021391          101 EYNSQGRPLNILINNAGIMASPF-----------------------------MLSKDNIELQFATNHLGHFLLTHLLLDT  151 (313)
Q Consensus       101 ~~~~~~g~id~lv~~ag~~~~~~-----------------------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~  151 (313)
                      ++.++|.++|.++.|||++..+.                             ..+.|++..+++.||+|++.+.+.+.|.
T Consensus        82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl  161 (341)
T KOG1478|consen   82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL  161 (341)
T ss_pred             HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence            99999999999999999753210                             2367889999999999999999999999


Q ss_pred             HHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCc
Q 021391          152 MKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPG  231 (313)
Q Consensus       152 l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG  231 (313)
                      +-+     +.++.+|.+||..+..   .+++++|++-.+   +..+|..||.++..+.-.+-+.+.+.|  +.-++++||
T Consensus       162 l~~-----~~~~~lvwtSS~~a~k---k~lsleD~q~~k---g~~pY~sSKrl~DlLh~A~~~~~~~~g--~~qyvv~pg  228 (341)
T KOG1478|consen  162 LCH-----SDNPQLVWTSSRMARK---KNLSLEDFQHSK---GKEPYSSSKRLTDLLHVALNRNFKPLG--INQYVVQPG  228 (341)
T ss_pred             hhc-----CCCCeEEEEeeccccc---ccCCHHHHhhhc---CCCCcchhHHHHHHHHHHHhccccccc--hhhhcccCc
Confidence            998     5567999999977543   455555555444   567799999999999999999999999  999999999


Q ss_pred             ccccCCcccc--chh-----Hh--HHHHHHHhhc-CChHHHHHHHHHHHc
Q 021391          232 SIVTNLFRYN--GIL-----RG--FCNTVGKLVL-KNIPQGAATTCYVAL  271 (313)
Q Consensus       232 ~v~t~~~~~~--~~~-----~~--~~~~~~~~~~-~~~~eva~~~~~l~~  271 (313)
                      ...|.+....  ++.     ..  ..+.....+- .+|-..|.+.+|+..
T Consensus       229 ~~tt~~~~~~l~~~~~~~~~~~fyl~rllgspwh~id~y~aa~A~vw~~l  278 (341)
T KOG1478|consen  229 IFTTNSFSEYLNPFTYFGMLCGFYLARLLGSPWHNIDPYKAANAPVWVTL  278 (341)
T ss_pred             eeecchhhhhhhhHHHHHHHHHHHHHHHhcCcccccCccccccchhhhhh
Confidence            9988876543  110     00  1112222222 456668888898875

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.91  E-value=9.4e-24  Score=230.23  Aligned_cols=181  Identities=20%  Similarity=0.141  Sum_probs=153.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHc-CCEEEEEecCch------------------------------------------
Q 021391           28 TGLTAIVTGASSGIGTETARVLALR-GVHVIMAVRNMA------------------------------------------   64 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~-G~~V~l~~r~~~------------------------------------------   64 (313)
                      +|+++|||||++|||+++|++|+++ |++|++++|+..                                          
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            6899999999999999999999998 699999999820                                          


Q ss_pred             -----hHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCeeEEEEcccCCCCCC--ccCccchhhhhhhh
Q 021391           65 -----AGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPF--MLSKDNIELQFATN  137 (313)
Q Consensus        65 -----~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n  137 (313)
                           +.+...+++.+.  +.++.++.+|++|.+++.++++++.+. ++||+||||||+.....  +.+.++|++.+++|
T Consensus      2076 ~~~~~ei~~~la~l~~~--G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~n 2152 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAA--GASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTK 2152 (2582)
T ss_pred             cchhHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHH
Confidence                 111122223222  567899999999999999999999877 68999999999875533  78899999999999


Q ss_pred             hhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhc
Q 021391          138 HLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLK  217 (313)
Q Consensus       138 ~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~  217 (313)
                      +.|.+++++++.+.+.         ++||++||+++..+.+               ++..|+++|++++.+++.++.++.
T Consensus      2153 v~G~~~Ll~al~~~~~---------~~IV~~SSvag~~G~~---------------gqs~YaaAkaaL~~la~~la~~~~ 2208 (2582)
T TIGR02813      2153 VDGLLSLLAALNAENI---------KLLALFSSAAGFYGNT---------------GQSDYAMSNDILNKAALQLKALNP 2208 (2582)
T ss_pred             HHHHHHHHHHHHHhCC---------CeEEEEechhhcCCCC---------------CcHHHHHHHHHHHHHHHHHHHHcC
Confidence            9999999999876543         3799999999988877               788999999999999999998875


Q ss_pred             cCCCcEEEEEeeCcccccCCcc
Q 021391          218 EDGVNITANSLHPGSIVTNLFR  239 (313)
Q Consensus       218 ~~g~~I~vn~i~PG~v~t~~~~  239 (313)
                      .    ++||+|+||+++|+|..
T Consensus      2209 ~----irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813      2209 S----AKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred             C----cEEEEEECCeecCCccc
Confidence            3    89999999999999864

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.90  E-value=8.8e-23  Score=195.20  Aligned_cols=212  Identities=15%  Similarity=0.102  Sum_probs=157.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHh-----C--CCCceEEEEccCCCHHHHHHHH
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKE-----I--PSAKVDAMELDVSSLASVRKFA   99 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~-----~--~~~~~~~~~~D~s~~~~v~~~~   99 (313)
                      ..||++|||||+||||++++++|+++|++|++++|+.++++.+.+++...     +  ...++.++.+|++|.+++.++ 
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a-  156 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA-  156 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH-
Confidence            57899999999999999999999999999999999988877766655321     1  123588999999999887654 


Q ss_pred             HHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccc-cccc
Q 021391          100 SEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHR-FAYS  178 (313)
Q Consensus       100 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~-~~~~  178 (313)
                            ++++|+||||+|....    ...++...+++|+.+..++++++.+.         ..++||++||.++. .+.+
T Consensus       157 ------LggiDiVVn~AG~~~~----~v~d~~~~~~VN~~Gt~nLl~Aa~~a---------gVgRIV~VSSiga~~~g~p  217 (576)
T PLN03209        157 ------LGNASVVICCIGASEK----EVFDVTGPYRIDYLATKNLVDAATVA---------KVNHFILVTSLGTNKVGFP  217 (576)
T ss_pred             ------hcCCCEEEEccccccc----cccchhhHHHHHHHHHHHHHHHHHHh---------CCCEEEEEccchhcccCcc
Confidence                  3579999999997532    22346778999999999999988643         14699999998753 2211


Q ss_pred             CCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--chhHhHHHHHHHhhc
Q 021391          179 EGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--GILRGFCNTVGKLVL  256 (313)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--~~~~~~~~~~~~~~~  256 (313)
                                      ...|. +|.++..+.+.+..++...|  |++|.|+||++.|++....  .............+.
T Consensus       218 ----------------~~~~~-sk~~~~~~KraaE~~L~~sG--IrvTIVRPG~L~tp~d~~~~t~~v~~~~~d~~~gr~  278 (576)
T PLN03209        218 ----------------AAILN-LFWGVLCWKRKAEEALIASG--LPYTIVRPGGMERPTDAYKETHNLTLSEEDTLFGGQ  278 (576)
T ss_pred             ----------------ccchh-hHHHHHHHHHHHHHHHHHcC--CCEEEEECCeecCCccccccccceeeccccccCCCc
Confidence                            11233 78888888888888898889  9999999999988754321  101111111233456


Q ss_pred             CChHHHHHHHHHHHccCCccC
Q 021391          257 KNIPQGAATTCYVALHPQVQG  277 (313)
Q Consensus       257 ~~~~eva~~~~~l~~~~~~~~  277 (313)
                      .+.+|||+.++++++++.+.+
T Consensus       279 isreDVA~vVvfLasd~~as~  299 (576)
T PLN03209        279 VSNLQVAELMACMAKNRRLSY  299 (576)
T ss_pred             cCHHHHHHHHHHHHcCchhcc
Confidence            789999999999998554444

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.89  E-value=2.3e-21  Score=176.88  Aligned_cols=250  Identities=12%  Similarity=0.058  Sum_probs=173.9

Q ss_pred             CCCCEEEEeCCCCchHHH--HHHHHHHcCCEEEEEecCchhHH------------HHHHHHHHhCCCCceEEEEccCCCH
Q 021391           27 GTGLTAIVTGASSGIGTE--TARVLALRGVHVIMAVRNMAAGK------------DVREAIVKEIPSAKVDAMELDVSSL   92 (313)
Q Consensus        27 ~~gk~~lItGas~giG~a--ia~~La~~G~~V~l~~r~~~~~~------------~~~~~l~~~~~~~~~~~~~~D~s~~   92 (313)
                      -.||++||||+++|||.+  +|+.| ++|++|+++++..+..+            ...+.+...  +..+..+.||++++
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~--G~~a~~i~~DVss~  115 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAA--GLYAKSINGDAFSD  115 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhc--CCceEEEEcCCCCH
Confidence            457999999999999999  89999 99999888885432211            222223222  44677899999999


Q ss_pred             HHHHHHHHHHhhcCCCeeEEEEcccCCCCCC-----------------------c-------------cCccchhhhhhh
Q 021391           93 ASVRKFASEYNSQGRPLNILINNAGIMASPF-----------------------M-------------LSKDNIELQFAT  136 (313)
Q Consensus        93 ~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~-----------------------~-------------~~~~~~~~~~~~  136 (313)
                      ++++++++++.+.+|+||+||||+|......                       +             .+.++++.  .+
T Consensus       116 E~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~--Tv  193 (398)
T PRK13656        116 EIKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIAD--TV  193 (398)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHH--HH
Confidence            9999999999999999999999999763211                       1             11112222  22


Q ss_pred             hhhHH-----HHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCCCCCCcc--ccchHhHHHHHHHH
Q 021391          137 NHLGH-----FLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSF--GAYGQSKLANILHA  209 (313)
Q Consensus       137 n~~~~-----~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~asK~a~~~l~  209 (313)
                      +++|.     |.=.....+.|.+       ++++|.+|+..+....|               .+  ..-+.+|++++..+
T Consensus       194 ~vMggedw~~Wi~al~~a~lla~-------g~~~va~TY~G~~~t~p---------------~Y~~g~mG~AKa~LE~~~  251 (398)
T PRK13656        194 KVMGGEDWELWIDALDEAGVLAE-------GAKTVAYSYIGPELTHP---------------IYWDGTIGKAKKDLDRTA  251 (398)
T ss_pred             HhhccchHHHHHHHHHhcccccC-------CcEEEEEecCCcceeec---------------ccCCchHHHHHHHHHHHH
Confidence            33333     2334555566644       79999999988877655               33  46799999999999


Q ss_pred             HHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHH---HHHHHhhcCChHHHHHHHHHHHccCCccCCCcee--ec
Q 021391          210 KELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFC---NTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEY--FS  284 (313)
Q Consensus       210 ~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~---~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~--~~  284 (313)
                      |.|+.++++.|  ||+|++.+|++.|......+....+.   -+++.. -.+-|-..+.+.-|....  -+-.|..  ++
T Consensus       252 r~La~~L~~~g--iran~i~~g~~~T~Ass~Ip~~~ly~~~l~kvmk~-~g~he~~ieq~~rl~~~~--ly~~~~~~~~d  326 (398)
T PRK13656        252 LALNEKLAAKG--GDAYVSVLKAVVTQASSAIPVMPLYISLLFKVMKE-KGTHEGCIEQIYRLFSER--LYRDGAIPEVD  326 (398)
T ss_pred             HHHHHHhhhcC--CEEEEEecCcccchhhhcCCCcHHHHHHHHHHHHh-cCCCCChHHHHHHHHHHh--cccCCCCCCcC
Confidence            99999999999  99999999999998877654333222   222222 223455556666666411  1112322  45


Q ss_pred             CCcccCCCccCCCHHHHH---HHHHHH
Q 021391          285 DSNIYKPNSQGQNMELAK---KLWDFS  308 (313)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~---~~~~~~  308 (313)
                      ..|..+.-++..+++.|+   +||+..
T Consensus       327 ~~~r~r~d~~el~~~vq~~v~~~~~~~  353 (398)
T PRK13656        327 EEGRLRLDDWELRPDVQAAVRELWPQV  353 (398)
T ss_pred             CcCCcccchhhcCHHHHHHHHHHHHHh
Confidence            668888999999998885   567653

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.89  E-value=5.5e-22  Score=164.41  Aligned_cols=173  Identities=23%  Similarity=0.242  Sum_probs=141.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHH---HHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           30 LTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDV---REAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~---~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      |+++||||++|||++++++|+++|+ .|++++|+.+..+..   .+++...  +.++.++.+|++++++++++++++...
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   78 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEAL--GAEVTVVACDVADRAALAAALAAIPAR   78 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            5799999999999999999999997 688888876544332   2334332  457889999999999999999999888


Q ss_pred             CCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          106 GRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      ++++|++|||+|.....  ...+.++++.++++|+.+++.+++.+.+         ...+++|++||..+..+.+     
T Consensus        79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~---------~~~~~ii~~ss~~~~~~~~-----  144 (180)
T smart00822       79 LGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRD---------LPLDFFVLFSSVAGVLGNP-----  144 (180)
T ss_pred             cCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhcc---------CCcceEEEEccHHHhcCCC-----
Confidence            89999999999976432  3667788999999999999999998832         2257999999998877655     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccc
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIV  234 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~  234 (313)
                                ....|+++|.+++.+++.+    .+.|  +++.+++||+++
T Consensus       145 ----------~~~~y~~sk~~~~~~~~~~----~~~~--~~~~~~~~g~~~  179 (180)
T smart00822      145 ----------GQANYAAANAFLDALAAHR----RARG--LPATSINWGAWA  179 (180)
T ss_pred             ----------CchhhHHHHHHHHHHHHHH----HhcC--CceEEEeecccc
Confidence                      6678999999999888765    4466  889999999875

It uses NADPH to reduce the keto group to a hydroxy group.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.89  E-value=2e-21  Score=178.10  Aligned_cols=204  Identities=14%  Similarity=0.120  Sum_probs=151.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcC--CEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRG--VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      ++||++|||||+|+||++++++|+++|  ++|++++|+........+.+    ...++.++.+|++|.+++.++++    
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~----~~~~~~~v~~Dl~d~~~l~~~~~----   73 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF----PAPCLRFFIGDVRDKERLTRALR----   73 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh----CCCcEEEEEccCCCHHHHHHHHh----
Confidence            478999999999999999999999987  68999998865543332222    23468899999999999888765    


Q ss_pred             cCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCC
Q 021391          105 QGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFD  184 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  184 (313)
                         ++|+|||+||....+.  ........+++|+.+++++++++.+.         ..++||++||.....         
T Consensus        74 ---~iD~Vih~Ag~~~~~~--~~~~~~~~~~~Nv~g~~~ll~aa~~~---------~~~~iV~~SS~~~~~---------  130 (324)
T TIGR03589        74 ---GVDYVVHAAALKQVPA--AEYNPFECIRTNINGAQNVIDAAIDN---------GVKRVVALSTDKAAN---------  130 (324)
T ss_pred             ---cCCEEEECcccCCCch--hhcCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEEeCCCCCC---------
Confidence               5899999999753322  22334578999999999999998753         135899999864321         


Q ss_pred             CCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHH-H---HH------Hh
Q 021391          185 KINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCN-T---VG------KL  254 (313)
Q Consensus       185 ~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~-~---~~------~~  254 (313)
                               +...|++||++.+.+++.++.+++..|  ++++++.||.+.++...-.+....... .   .+      ..
T Consensus       131 ---------p~~~Y~~sK~~~E~l~~~~~~~~~~~g--i~~~~lR~g~v~G~~~~~i~~~~~~~~~~~~~~~i~~~~~~r  199 (324)
T TIGR03589       131 ---------PINLYGATKLASDKLFVAANNISGSKG--TRFSVVRYGNVVGSRGSVVPFFKSLKEEGVTELPITDPRMTR  199 (324)
T ss_pred             ---------CCCHHHHHHHHHHHHHHHHHhhccccC--cEEEEEeecceeCCCCCcHHHHHHHHHhCCCCeeeCCCCceE
Confidence                     345799999999999999998888888  999999999998764221111111110 0   00      01


Q ss_pred             hcCChHHHHHHHHHHHcc
Q 021391          255 VLKNIPQGAATTCYVALH  272 (313)
Q Consensus       255 ~~~~~~eva~~~~~l~~~  272 (313)
                      .+..++|++++++.++..
T Consensus       200 ~~i~v~D~a~a~~~al~~  217 (324)
T TIGR03589       200 FWITLEQGVNFVLKSLER  217 (324)
T ss_pred             eeEEHHHHHHHHHHHHhh
Confidence            146789999999998863

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.88  E-value=1.1e-20  Score=168.48  Aligned_cols=235  Identities=18%  Similarity=0.160  Sum_probs=169.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHH--HHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDV--REAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~--~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      .+++|+||||||.||.+++++|+++|++|+.+.|++++.+..  ..++..  .+.+...+..|++|+++++.+++     
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~--a~~~l~l~~aDL~d~~sf~~ai~-----   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEG--AKERLKLFKADLLDEGSFDKAID-----   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhccc--CcccceEEeccccccchHHHHHh-----
Confidence            789999999999999999999999999999999999874442  333332  24569999999999999999988     


Q ss_pred             CCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCC
Q 021391          106 GRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDK  185 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  185 (313)
                        ++|+|+|.|.......   .+...+.++..+.|+.++++++...-        .--|||++||.++............
T Consensus        78 --gcdgVfH~Asp~~~~~---~~~e~~li~pav~Gt~nVL~ac~~~~--------sVkrvV~TSS~aAv~~~~~~~~~~~  144 (327)
T KOG1502|consen   78 --GCDGVFHTASPVDFDL---EDPEKELIDPAVKGTKNVLEACKKTK--------SVKRVVYTSSTAAVRYNGPNIGENS  144 (327)
T ss_pred             --CCCEEEEeCccCCCCC---CCcHHhhhhHHHHHHHHHHHHHhccC--------CcceEEEeccHHHhccCCcCCCCCc
Confidence              7999999997553311   11334789999999999999997653        1249999999998876522333333


Q ss_pred             CCCCCCCCc-------cccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc-----hhHhHHHH---
Q 021391          186 INDESAYNS-------FGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG-----ILRGFCNT---  250 (313)
Q Consensus       186 ~~~~~~~~~-------~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~-----~~~~~~~~---  250 (313)
                      .-+++.|+.       ...|+.||    .+++..|.+|++++ ++....|+||.|-.|......     ....+.+.   
T Consensus       145 vvdE~~wsd~~~~~~~~~~Y~~sK----~lAEkaAw~fa~e~-~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~  219 (327)
T KOG1502|consen  145 VVDEESWSDLDFCRCKKLWYALSK----TLAEKAAWEFAKEN-GLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAE  219 (327)
T ss_pred             ccccccCCcHHHHHhhHHHHHHHH----HHHHHHHHHHHHhC-CccEEEecCCceECCCcccccchhHHHHHHHHhcccc
Confidence            333333322       14699999    55666777777654 488999999999888776521     11111111   


Q ss_pred             -HH--HhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          251 -VG--KLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       251 -~~--~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                       .+  ...+....|+|.+.++++..+.+.   |+|+..+....
T Consensus       220 ~~~n~~~~~VdVrDVA~AHv~a~E~~~a~---GRyic~~~~~~  259 (327)
T KOG1502|consen  220 TYPNFWLAFVDVRDVALAHVLALEKPSAK---GRYICVGEVVS  259 (327)
T ss_pred             cCCCCceeeEeHHHHHHHHHHHHcCcccC---ceEEEecCccc
Confidence             01  112478999999999999866554   89888766554

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.87  E-value=2.1e-20  Score=171.22  Aligned_cols=224  Identities=17%  Similarity=0.112  Sum_probs=156.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      +||++|||||+|+||++++++|+++|++|++++|+....+.............++.++.+|+++.+++.++++       
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-------   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------
Confidence            5799999999999999999999999999999999876554432222111112468899999999999888776       


Q ss_pred             CeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC-CCCCC
Q 021391          108 PLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI-RFDKI  186 (313)
Q Consensus       108 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~-~~~~~  186 (313)
                      ++|+||||||....  ..+.+.+...+++|+.+++++++++.+.+.        .++||++||.++..+..... ....+
T Consensus        77 ~~d~vih~A~~~~~--~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~--------~~~iv~~SS~~~~~~~~~~~~~~~~~  146 (325)
T PLN02989         77 GCETVFHTASPVAI--TVKTDPQVELINPAVNGTINVLRTCTKVSS--------VKRVILTSSMAAVLAPETKLGPNDVV  146 (325)
T ss_pred             CCCEEEEeCCCCCC--CCCCChHHHHHHHHHHHHHHHHHHHHHcCC--------ceEEEEecchhheecCCccCCCCCcc
Confidence            58999999996432  334566788999999999999999876531        35999999987654421000 00112


Q ss_pred             CCCCCCCc------cccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-chhHhHHHHHHH------
Q 021391          187 NDESAYNS------FGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-GILRGFCNTVGK------  253 (313)
Q Consensus       187 ~~~~~~~~------~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-~~~~~~~~~~~~------  253 (313)
                      ++..+..+      ...|+.||.+.+.+++.++.++   |  +.++.+.|+.+-.|..... .+..........      
T Consensus       147 ~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~  221 (325)
T PLN02989        147 DETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDN---E--IDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFN  221 (325)
T ss_pred             CcCCCCchhHhcccccchHHHHHHHHHHHHHHHHHc---C--CeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCC
Confidence            33322222      3579999999999888876654   5  8889999999988765431 111111111111      


Q ss_pred             ---hhcCChHHHHHHHHHHHccC
Q 021391          254 ---LVLKNIPQGAATTCYVALHP  273 (313)
Q Consensus       254 ---~~~~~~~eva~~~~~l~~~~  273 (313)
                         ..+..++|+|++++.++.++
T Consensus       222 ~~~r~~i~v~Dva~a~~~~l~~~  244 (325)
T PLN02989        222 TTHHRFVDVRDVALAHVKALETP  244 (325)
T ss_pred             CcCcCeeEHHHHHHHHHHHhcCc
Confidence               12345799999999988744

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.86  E-value=2.7e-20  Score=172.27  Aligned_cols=222  Identities=16%  Similarity=0.103  Sum_probs=157.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      ++||++|||||+|+||+++++.|+++|++|++++|+........+.+..   ..++.++.+|+++.+++.+++++.    
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~----   74 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL---AKKIEDHFGDIRDAAKLRKAIAEF----   74 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh---cCCceEEEccCCCHHHHHHHHhhc----
Confidence            5789999999999999999999999999999999987654433332221   335778999999999999988864    


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                       ++|+|||+|+....  ..+.+++...+++|+.+++++++++.+.        +..+++|++||...+.... .  ....
T Consensus        75 -~~d~vih~A~~~~~--~~~~~~~~~~~~~N~~g~~~ll~a~~~~--------~~~~~iv~~SS~~vyg~~~-~--~~~~  140 (349)
T TIGR02622        75 -KPEIVFHLAAQPLV--RKSYADPLETFETNVMGTVNLLEAIRAI--------GSVKAVVNVTSDKCYRNDE-W--VWGY  140 (349)
T ss_pred             -CCCEEEECCccccc--ccchhCHHHHHHHhHHHHHHHHHHHHhc--------CCCCEEEEEechhhhCCCC-C--CCCC
Confidence             68999999985322  3455677889999999999999987431        1135899999975442210 0  0012


Q ss_pred             CCCCCCCccccchHhHHHHHHHHHHHHHHhcc----CCCcEEEEEeeCcccccCCccc-cchhHhHHHHHH---------
Q 021391          187 NDESAYNSFGAYGQSKLANILHAKELAKHLKE----DGVNITANSLHPGSIVTNLFRY-NGILRGFCNTVG---------  252 (313)
Q Consensus       187 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~----~g~~I~vn~i~PG~v~t~~~~~-~~~~~~~~~~~~---------  252 (313)
                      ++..+..+...|+.+|.+.+.+++.++.++.+    .|  ++++++.|+.+-.|.... ..+...+.....         
T Consensus       141 ~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~--i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~  218 (349)
T TIGR02622       141 RETDPLGGHDPYSSSKACAELVIASYRSSFFGVANFHG--IKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRN  218 (349)
T ss_pred             ccCCCCCCCCcchhHHHHHHHHHHHHHHHhhcccccCC--CcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECC
Confidence            23334456678999999999999999988855    36  999999999998764211 111122211111         


Q ss_pred             ---HhhcCChHHHHHHHHHHHc
Q 021391          253 ---KLVLKNIPQGAATTCYVAL  271 (313)
Q Consensus       253 ---~~~~~~~~eva~~~~~l~~  271 (313)
                         ..-+...+|++++++.++.
T Consensus       219 g~~~rd~i~v~D~a~a~~~~~~  240 (349)
T TIGR02622       219 PDATRPWQHVLEPLSGYLLLAE  240 (349)
T ss_pred             CCcccceeeHHHHHHHHHHHHH
Confidence               1113457788999887765

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.86  E-value=9.9e-20  Score=166.59  Aligned_cols=225  Identities=20%  Similarity=0.151  Sum_probs=152.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      +.+||++|||||+|+||++++++|+++|++|+++.|+.+..+.............++.++.+|+++.++++++++     
T Consensus         2 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   76 (322)
T PLN02986          2 NGGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE-----   76 (322)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh-----
Confidence            457899999999999999999999999999999999876554332222111112468899999999998888876     


Q ss_pred             CCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccc-cccCCCCCC
Q 021391          106 GRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRF-AYSEGIRFD  184 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~-~~~~~~~~~  184 (313)
                        ++|+|||+|+.....   ..+.....+++|+.+..++++++....        .-.+||++||.+... +.+....-.
T Consensus        77 --~~d~vih~A~~~~~~---~~~~~~~~~~~nv~gt~~ll~~~~~~~--------~v~rvV~~SS~~~~~~~~~~~~~~~  143 (322)
T PLN02986         77 --GCDAVFHTASPVFFT---VKDPQTELIDPALKGTINVLNTCKETP--------SVKRVILTSSTAAVLFRQPPIEAND  143 (322)
T ss_pred             --CCCEEEEeCCCcCCC---CCCchhhhhHHHHHHHHHHHHHHHhcC--------CccEEEEecchhheecCCccCCCCC
Confidence              589999999864221   123345678999999999999875321        135899999987642 211100001


Q ss_pred             CCCCCCCC------CccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-chhHhHHHHHH-----
Q 021391          185 KINDESAY------NSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-GILRGFCNTVG-----  252 (313)
Q Consensus       185 ~~~~~~~~------~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-~~~~~~~~~~~-----  252 (313)
                      .+++..+.      .+...|++||.+.+.+++.+..++   |  ++++.++|+.+.+|..... .+.........     
T Consensus       144 ~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---~--~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~  218 (322)
T PLN02986        144 VVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDN---G--IDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNL  218 (322)
T ss_pred             CcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHHh---C--CeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCC
Confidence            12222111      124579999999998888876654   5  8999999999988864421 11111111100     


Q ss_pred             ----HhhcCChHHHHHHHHHHHccC
Q 021391          253 ----KLVLKNIPQGAATTCYVALHP  273 (313)
Q Consensus       253 ----~~~~~~~~eva~~~~~l~~~~  273 (313)
                          ...+..++|+|++++.++.++
T Consensus       219 ~~~~~~~~v~v~Dva~a~~~al~~~  243 (322)
T PLN02986        219 FNNRFYRFVDVRDVALAHIKALETP  243 (322)
T ss_pred             CCCcCcceeEHHHHHHHHHHHhcCc
Confidence                012567899999999999754

>PLN02583 cinnamoyl-CoA reductase

Probab=99.84  E-value=1.3e-19  Score=164.01  Aligned_cols=232  Identities=15%  Similarity=0.057  Sum_probs=154.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchh--HHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAA--GKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      |+=.+|++|||||+|+||++++++|+++|++|+++.|+.+.  .......+...  +.++.++.+|++|.+++..++.  
T Consensus         2 ~~~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~~~~~l~--   77 (297)
T PLN02583          2 FDESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCE--EERLKVFDVDPLDYHSILDALK--   77 (297)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccC--CCceEEEEecCCCHHHHHHHHc--
Confidence            44567999999999999999999999999999999986432  22222222111  3468889999999998876654  


Q ss_pred             hhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC-C
Q 021391          103 NSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG-I  181 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~-~  181 (313)
                           ++|.++|.++....   . ...++.++++|+.+++++++++.+.+.        .++||++||.++....+.. .
T Consensus        78 -----~~d~v~~~~~~~~~---~-~~~~~~~~~~nv~gt~~ll~aa~~~~~--------v~riV~~SS~~a~~~~~~~~~  140 (297)
T PLN02583         78 -----GCSGLFCCFDPPSD---Y-PSYDEKMVDVEVRAAHNVLEACAQTDT--------IEKVVFTSSLTAVIWRDDNIS  140 (297)
T ss_pred             -----CCCEEEEeCccCCc---c-cccHHHHHHHHHHHHHHHHHHHHhcCC--------ccEEEEecchHheecccccCC
Confidence                 57899987753321   1 124678999999999999999986531        3599999998775422111 1


Q ss_pred             CCCCCCCCCCCCc------cccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-chhHhHHHHH--H
Q 021391          182 RFDKINDESAYNS------FGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-GILRGFCNTV--G  252 (313)
Q Consensus       182 ~~~~~~~~~~~~~------~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-~~~~~~~~~~--~  252 (313)
                      +...+++..+...      ...|+.||...+.+++.++.+.   |  +++++|+|+.+.+|..... ..........  .
T Consensus       141 ~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---g--i~~v~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~  215 (297)
T PLN02583        141 TQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMDR---G--VNMVSINAGLLMGPSLTQHNPYLKGAAQMYENG  215 (297)
T ss_pred             CCCCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHHh---C--CcEEEEcCCcccCCCCCCchhhhcCCcccCccc
Confidence            1112222222111      1269999999998887776543   6  9999999999988764321 1111000000  1


Q ss_pred             HhhcCChHHHHHHHHHHHccCCccCCCceeecC
Q 021391          253 KLVLKNIPQGAATTCYVALHPQVQGVSGEYFSD  285 (313)
Q Consensus       253 ~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~  285 (313)
                      ...+..++|+|++++..+..+.   ..|+++..
T Consensus       216 ~~~~v~V~Dva~a~~~al~~~~---~~~r~~~~  245 (297)
T PLN02583        216 VLVTVDVNFLVDAHIRAFEDVS---SYGRYLCF  245 (297)
T ss_pred             CcceEEHHHHHHHHHHHhcCcc---cCCcEEEe
Confidence            1235788999999999997443   23455443

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.84  E-value=1.4e-19  Score=166.95  Aligned_cols=231  Identities=13%  Similarity=0.043  Sum_probs=153.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHH-HHHHHHHH-hC-CCCceEEEEccCCCHHHHHHHHHHH
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGK-DVREAIVK-EI-PSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~-~~~~~l~~-~~-~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.+... ...+.+.. .. .+.++.++.+|++|.+++.++++.+
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   82 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI   82 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence            578999999999999999999999999999999998754211 11222211 01 1346889999999999999988875


Q ss_pred             hhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          103 NSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                           .+|+|||+|+.....  ...+..+..+++|+.++.++++++.+.+.+.    ....++|++||...+ +....  
T Consensus        83 -----~~d~Vih~A~~~~~~--~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~----~~~~~~v~~Ss~~vy-g~~~~--  148 (340)
T PLN02653         83 -----KPDEVYNLAAQSHVA--VSFEMPDYTADVVATGALRLLEAVRLHGQET----GRQIKYYQAGSSEMY-GSTPP--  148 (340)
T ss_pred             -----CCCEEEECCcccchh--hhhhChhHHHHHHHHHHHHHHHHHHHhcccc----ccceeEEEeccHHHh-CCCCC--
Confidence                 589999999975432  2234557778999999999999998876541    011268888876443 32211  


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCC-CcEEEEEeeCcccccCCccccc-hhHhHHHH----H-----
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDG-VNITANSLHPGSIVTNLFRYNG-ILRGFCNT----V-----  251 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g-~~I~vn~i~PG~v~t~~~~~~~-~~~~~~~~----~-----  251 (313)
                        .+++..+..+...|+.||.+.+.++++++.+++-.- ..+.+|.+.|+...+.+..... +.......    +     
T Consensus       149 --~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g  226 (340)
T PLN02653        149 --PQSETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNL  226 (340)
T ss_pred             --CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCC
Confidence              233444555677899999999999999988775310 1155666677643321111000 00000000    0     


Q ss_pred             -HHhhcCChHHHHHHHHHHHcc
Q 021391          252 -GKLVLKNIPQGAATTCYVALH  272 (313)
Q Consensus       252 -~~~~~~~~~eva~~~~~l~~~  272 (313)
                       ...-+...+|+|++++.++.+
T Consensus       227 ~~~rd~i~v~D~a~a~~~~~~~  248 (340)
T PLN02653        227 DASRDWGFAGDYVEAMWLMLQQ  248 (340)
T ss_pred             cceecceeHHHHHHHHHHHHhc
Confidence             011235789999999998874

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.84  E-value=3.4e-20  Score=155.88  Aligned_cols=172  Identities=22%  Similarity=0.249  Sum_probs=132.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCc---hhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           31 TAIVTGASSGIGTETARVLALRGV-HVIMAVRNM---AAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G~-~V~l~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      ++|||||++|||..+++.|+++|. +|++++|+.   ...++..+++...  +.++.++.+|++|++++.++++++.+++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~--g~~v~~~~~Dv~d~~~v~~~~~~~~~~~   79 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESA--GARVEYVQCDVTDPEAVAAALAQLRQRF   79 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHT--T-EEEEEE--TTSHHHHHHHHHTSHTTS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhC--CCceeeeccCccCHHHHHHHHHHHHhcc
Confidence            789999999999999999999987 899999982   3455677777765  6799999999999999999999999999


Q ss_pred             CCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCC
Q 021391          107 RPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFD  184 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  184 (313)
                      ++|+.|||++|......  +.+.+.++..+...+.+.++|.+.+.+.-         -..+|++||+++..+.+      
T Consensus        80 ~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~---------l~~~i~~SSis~~~G~~------  144 (181)
T PF08659_consen   80 GPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRP---------LDFFILFSSISSLLGGP------  144 (181)
T ss_dssp             S-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTT---------TSEEEEEEEHHHHTT-T------
T ss_pred             CCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCC---------CCeEEEECChhHhccCc------
Confidence            99999999999875532  77889999999999999999999886621         34889999999999888      


Q ss_pred             CCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccc
Q 021391          185 KINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIV  234 (313)
Q Consensus       185 ~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~  234 (313)
                               ++..|+++.+.++.+++...    ..|  ..+.+|+.|+.+
T Consensus       145 ---------gq~~YaaAN~~lda~a~~~~----~~g--~~~~sI~wg~W~  179 (181)
T PF08659_consen  145 ---------GQSAYAAANAFLDALARQRR----SRG--LPAVSINWGAWD  179 (181)
T ss_dssp             ---------TBHHHHHHHHHHHHHHHHHH----HTT--SEEEEEEE-EBS
T ss_pred             ---------chHhHHHHHHHHHHHHHHHH----hCC--CCEEEEEccccC
Confidence                     88999999999888777644    345  567788877654

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK06720 hypothetical protein; Provisional

Probab=99.83  E-value=2.3e-19  Score=148.78  Aligned_cols=146  Identities=20%  Similarity=0.229  Sum_probs=118.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .|+++||+++||||++|||+++++.|+++|++|++++|+.+..++..+++...  +....++.+|+++.+++.++++++.
T Consensus        11 ~~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~v~~~~   88 (169)
T PRK06720         11 KMKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNL--GGEALFVSYDMEKQGDWQRVISITL   88 (169)
T ss_pred             ccccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            46689999999999999999999999999999999999988777777777643  3467788999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCCC--C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccC--CCCCeEEEECCcccc
Q 021391          104 SQGRPLNILINNAGIMASP--F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKS--SREGRIVNVSSEAHR  174 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~--~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~--~~~g~iv~isS~~~~  174 (313)
                      +.+|++|++|||||+....  . +.+.+. ++  .+|+.+.+..++.+.++|.+.....  +..||+..||+.+..
T Consensus        89 ~~~G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (169)
T PRK06720         89 NAFSRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQS  161 (169)
T ss_pred             HHcCCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccccc
Confidence            9999999999999986532  2 223333 33  6788888999999999988854332  456788888876643

>PLN02650 dihydroflavonol-4-reductase

Probab=99.83  E-value=8.8e-19  Score=162.29  Aligned_cols=221  Identities=19%  Similarity=0.098  Sum_probs=151.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      ..|++|||||+|+||++++++|+++|++|++++|+.+........+.......++.++.+|+++.+++..+++       
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-------   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR-------   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------
Confidence            5689999999999999999999999999999999876555433222111112357899999999998887765       


Q ss_pred             CeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCC
Q 021391          108 PLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIN  187 (313)
Q Consensus       108 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  187 (313)
                      .+|+|||+|+.....   ..+..+..+++|+.+++++++++.+...        ..+||++||.....+.+.....  .+
T Consensus        77 ~~d~ViH~A~~~~~~---~~~~~~~~~~~Nv~gt~~ll~aa~~~~~--------~~r~v~~SS~~~~~~~~~~~~~--~~  143 (351)
T PLN02650         77 GCTGVFHVATPMDFE---SKDPENEVIKPTVNGMLSIMKACAKAKT--------VRRIVFTSSAGTVNVEEHQKPV--YD  143 (351)
T ss_pred             CCCEEEEeCCCCCCC---CCCchhhhhhHHHHHHHHHHHHHHhcCC--------ceEEEEecchhhcccCCCCCCc--cC
Confidence            589999999864211   1233457899999999999999876421        2489999997554332111000  01


Q ss_pred             CC---------CCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc---chhHhHHHH-----
Q 021391          188 DE---------SAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN---GILRGFCNT-----  250 (313)
Q Consensus       188 ~~---------~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~---~~~~~~~~~-----  250 (313)
                      +.         ....+...|+.||.+.+.+++.++.++   |  ++++.+.|+.+.+|.....   .+.......     
T Consensus       144 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~  218 (351)
T PLN02650        144 EDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAEN---G--LDFISIIPTLVVGPFISTSMPPSLITALSLITGNEA  218 (351)
T ss_pred             cccCCchhhhhccccccchHHHHHHHHHHHHHHHHHHc---C--CeEEEECCCceECCCCCCCCCccHHHHHHHhcCCcc
Confidence            11         011123479999999999998887753   5  9999999999988864321   111111000     


Q ss_pred             ----HHHhhcCChHHHHHHHHHHHccC
Q 021391          251 ----VGKLVLKNIPQGAATTCYVALHP  273 (313)
Q Consensus       251 ----~~~~~~~~~~eva~~~~~l~~~~  273 (313)
                          .....+..++|+|++++.++..+
T Consensus       219 ~~~~~~~r~~v~V~Dva~a~~~~l~~~  245 (351)
T PLN02650        219 HYSIIKQGQFVHLDDLCNAHIFLFEHP  245 (351)
T ss_pred             ccCcCCCcceeeHHHHHHHHHHHhcCc
Confidence                01123578999999999999743

>PLN02214 cinnamoyl-CoA reductase

Probab=99.83  E-value=1.1e-18  Score=161.11  Aligned_cols=225  Identities=18%  Similarity=0.154  Sum_probs=154.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHH-HHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDV-REAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~-~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      +++|++|||||+|+||++++++|+++|++|++++|+.+..... ...+..  ...++.++.+|+++.+++..+++     
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~-----   80 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEG--GKERLILCKADLQDYEALKAAID-----   80 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhC--CCCcEEEEecCcCChHHHHHHHh-----
Confidence            5689999999999999999999999999999999986543221 122211  12358889999999998888776     


Q ss_pred             CCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCC
Q 021391          106 GRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDK  185 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  185 (313)
                        ++|+|||+|+..       .++....+++|+.++.++++++....         ..+||++||.++.++.+.......
T Consensus        81 --~~d~Vih~A~~~-------~~~~~~~~~~nv~gt~~ll~aa~~~~---------v~r~V~~SS~~avyg~~~~~~~~~  142 (342)
T PLN02214         81 --GCDGVFHTASPV-------TDDPEQMVEPAVNGAKFVINAAAEAK---------VKRVVITSSIGAVYMDPNRDPEAV  142 (342)
T ss_pred             --cCCEEEEecCCC-------CCCHHHHHHHHHHHHHHHHHHHHhcC---------CCEEEEeccceeeeccCCCCCCcc
Confidence              589999999853       23567889999999999999986431         348999999866654322110011


Q ss_pred             CCCCC------CCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--chhHhHHHHHH-----
Q 021391          186 INDES------AYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--GILRGFCNTVG-----  252 (313)
Q Consensus       186 ~~~~~------~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--~~~~~~~~~~~-----  252 (313)
                      +++..      ..++...|+.||.+.+.+++.++.+.   |  +++..+.|+.+-.|.....  .....+.....     
T Consensus       143 ~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---g--~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~  217 (342)
T PLN02214        143 VDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEK---G--VDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKT  217 (342)
T ss_pred             cCcccCCChhhccccccHHHHHHHHHHHHHHHHHHHc---C--CcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccc
Confidence            22221      12244679999999999888876654   5  8889999999977754321  11111111000     


Q ss_pred             ----HhhcCChHHHHHHHHHHHccCCccCCCceeec
Q 021391          253 ----KLVLKNIPQGAATTCYVALHPQVQGVSGEYFS  284 (313)
Q Consensus       253 ----~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~  284 (313)
                          ..-+..++|+|++++.++.++.   ..|.++.
T Consensus       218 ~~~~~~~~i~V~Dva~a~~~al~~~~---~~g~yn~  250 (342)
T PLN02214        218 YANLTQAYVDVRDVALAHVLVYEAPS---ASGRYLL  250 (342)
T ss_pred             CCCCCcCeeEHHHHHHHHHHHHhCcc---cCCcEEE
Confidence                0124578999999999987432   2355543

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.82  E-value=1.6e-18  Score=158.31  Aligned_cols=223  Identities=17%  Similarity=0.100  Sum_probs=149.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHh-CCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKE-IPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      -+||++|||||+|+||++++++|+++|++|++++|+........ .+... ....++.++.+|+++++++..+++     
T Consensus         2 ~~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   75 (322)
T PLN02662          2 GEGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTE-HLLALDGAKERLHLFKANLLEEGSFDSVVD-----   75 (322)
T ss_pred             CCCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHH-HHHhccCCCCceEEEeccccCcchHHHHHc-----
Confidence            36799999999999999999999999999999999865433222 22111 112368899999999988877766     


Q ss_pred             CCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccc-ccccCCCCCC
Q 021391          106 GRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHR-FAYSEGIRFD  184 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~-~~~~~~~~~~  184 (313)
                        ++|+|||+|+......   .+..+.++++|+.++.++++++....        ...++|++||.++. ++........
T Consensus        76 --~~d~Vih~A~~~~~~~---~~~~~~~~~~nv~gt~~ll~a~~~~~--------~~~~~v~~SS~~~~~y~~~~~~~~~  142 (322)
T PLN02662         76 --GCEGVFHTASPFYHDV---TDPQAELIDPAVKGTLNVLRSCAKVP--------SVKRVVVTSSMAAVAYNGKPLTPDV  142 (322)
T ss_pred             --CCCEEEEeCCcccCCC---CChHHHHHHHHHHHHHHHHHHHHhCC--------CCCEEEEccCHHHhcCCCcCCCCCC
Confidence              5899999998653211   12234788999999999999986431        13489999998653 2211000001


Q ss_pred             CCCCCCCCCc------cccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-chh-HhHHHHH-----
Q 021391          185 KINDESAYNS------FGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-GIL-RGFCNTV-----  251 (313)
Q Consensus       185 ~~~~~~~~~~------~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-~~~-~~~~~~~-----  251 (313)
                      .++++.+..+      ...|+.+|.+.+.+++.++.+.   |  +++..+.|+.+-+|..... ... ..+.+..     
T Consensus       143 ~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~  217 (322)
T PLN02662        143 VVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKEN---G--IDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQT  217 (322)
T ss_pred             cCCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHHc---C--CcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCcc
Confidence            1233222212      2479999999998887766543   5  8899999999988864321 111 1111111     


Q ss_pred             ---HHhhcCChHHHHHHHHHHHccC
Q 021391          252 ---GKLVLKNIPQGAATTCYVALHP  273 (313)
Q Consensus       252 ---~~~~~~~~~eva~~~~~l~~~~  273 (313)
                         ....+..++|+|++++.++..+
T Consensus       218 ~~~~~~~~i~v~Dva~a~~~~~~~~  242 (322)
T PLN02662        218 FPNASYRWVDVRDVANAHIQAFEIP  242 (322)
T ss_pred             CCCCCcCeEEHHHHHHHHHHHhcCc
Confidence               0112467899999999998744

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.82  E-value=3.7e-18  Score=158.24  Aligned_cols=227  Identities=12%  Similarity=0.056  Sum_probs=148.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEE-EEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVI-MAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~-l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      |++|||||+|+||+++++.|+++|+.++ +++|..+. .. ...+....+..++.++.+|++|.+++++++++.     +
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   74 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GN-LMSLAPVAQSERFAFEKVDICDRAELARVFTEH-----Q   74 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cc-hhhhhhcccCCceEEEECCCcChHHHHHHHhhc-----C
Confidence            6899999999999999999999998754 45554321 11 111111111346788999999999998888753     6


Q ss_pred             eeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCC
Q 021391          109 LNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIND  188 (313)
Q Consensus       109 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~  188 (313)
                      +|+|||+||....  ..+.+.++..+++|+.+++++++++.+.+...........++|++||.+.+......  ...+++
T Consensus        75 ~D~Vih~A~~~~~--~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~--~~~~~E  150 (355)
T PRK10217         75 PDCVMHLAAESHV--DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHST--DDFFTE  150 (355)
T ss_pred             CCEEEECCcccCc--chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCC--CCCcCC
Confidence            9999999986532  234466788999999999999999987643210000113489999986543211100  011334


Q ss_pred             CCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHH------HH-------Hhh
Q 021391          189 ESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNT------VG-------KLV  255 (313)
Q Consensus       189 ~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~------~~-------~~~  255 (313)
                      ..+..+...|+.||.+.+.+++.++.+++     +++..+.|+.+-.|......+...+...      ++       ..-
T Consensus       151 ~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~-----~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~  225 (355)
T PRK10217        151 TTPYAPSSPYSASKASSDHLVRAWLRTYG-----LPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRD  225 (355)
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHHHhC-----CCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeC
Confidence            44555677899999999999999887764     5666677777765543211111111110      00       112


Q ss_pred             cCChHHHHHHHHHHHcc
Q 021391          256 LKNIPQGAATTCYVALH  272 (313)
Q Consensus       256 ~~~~~eva~~~~~l~~~  272 (313)
                      +..++|+++++..++.+
T Consensus       226 ~i~v~D~a~a~~~~~~~  242 (355)
T PRK10217        226 WLYVEDHARALYCVATT  242 (355)
T ss_pred             cCcHHHHHHHHHHHHhc
Confidence            46789999999888863

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.81  E-value=6.5e-18  Score=156.60  Aligned_cols=224  Identities=18%  Similarity=0.145  Sum_probs=150.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      +-+++++|||||+|+||++++++|+++|++|++++|+.+..+.....+..   +.++.++.+|+++.+++.++++     
T Consensus         7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~-----   78 (353)
T PLN02896          7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE---GDRLRLFRADLQEEGSFDEAVK-----   78 (353)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc---CCeEEEEECCCCCHHHHHHHHc-----
Confidence            34678999999999999999999999999999999987665544433321   3468899999999998877765     


Q ss_pred             CCCeeEEEEcccCCCCCCccCccch-----hhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          106 GRPLNILINNAGIMASPFMLSKDNI-----ELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~~~~~~~~-----~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                        .+|+|||+|+........+.++.     ...++.|+.+.+++++++.+..        ..+++|++||.+.+...+..
T Consensus        79 --~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~--------~~~~~v~~SS~~vyg~~~~~  148 (353)
T PLN02896         79 --GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK--------TVKRVVFTSSISTLTAKDSN  148 (353)
T ss_pred             --CCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC--------CccEEEEEechhhccccccC
Confidence              58999999997643321112222     2456677899999999887542        13589999998665432211


Q ss_pred             CCC-CCCCCC--CC-------CCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--chhHhHH
Q 021391          181 IRF-DKINDE--SA-------YNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--GILRGFC  248 (313)
Q Consensus       181 ~~~-~~~~~~--~~-------~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--~~~~~~~  248 (313)
                      ..+ ..+++.  .+       .++...|+.||.+.+.+++.++.++   |  +++..+.|+.+-.|.....  .+.....
T Consensus       149 ~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~lR~~~vyGp~~~~~~~~~~~~~~  223 (353)
T PLN02896        149 GRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN---G--IDLVSVITTTVAGPFLTPSVPSSIQVLL  223 (353)
T ss_pred             CCCCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc---C--CeEEEEcCCcccCCCcCCCCCchHHHHH
Confidence            000 011111  11       1233479999999999988877655   4  8999999988877754321  1111111


Q ss_pred             HHH---H--------------HhhcCChHHHHHHHHHHHcc
Q 021391          249 NTV---G--------------KLVLKNIPQGAATTCYVALH  272 (313)
Q Consensus       249 ~~~---~--------------~~~~~~~~eva~~~~~l~~~  272 (313)
                      ...   .              ..-+..++|+|++++.++..
T Consensus       224 ~~~~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~  264 (353)
T PLN02896        224 SPITGDSKLFSILSAVNSRMGSIALVHIEDICDAHIFLMEQ  264 (353)
T ss_pred             HHhcCCccccccccccccccCceeEEeHHHHHHHHHHHHhC
Confidence            100   0              01245789999999999863

>PLN02240 UDP-glucose 4-epimerase

Probab=99.80  E-value=1.6e-17  Score=153.63  Aligned_cols=183  Identities=18%  Similarity=0.152  Sum_probs=130.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhC--CCCceEEEEccCCCHHHHHHHHHHH
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEI--PSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      |+|++|++|||||+|+||++++++|+++|++|++++|...........+....  ...++.++.+|+++++++..++++.
T Consensus         1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~   80 (352)
T PLN02240          1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST   80 (352)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC
Confidence            56789999999999999999999999999999999875433222222222111  1246788999999999998888753


Q ss_pred             hhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          103 NSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                           .+|+|||+|+....  ..+.+.....+++|+.++.++++++...         +..++|++||.... +.+..  
T Consensus        81 -----~~d~vih~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~Ss~~vy-g~~~~--  141 (352)
T PLN02240         81 -----RFDAVIHFAGLKAV--GESVAKPLLYYDNNLVGTINLLEVMAKH---------GCKKLVFSSSATVY-GQPEE--  141 (352)
T ss_pred             -----CCCEEEEccccCCc--cccccCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEEccHHHh-CCCCC--
Confidence                 79999999997532  2234567789999999999999865321         13589999996433 32211  


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCc
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPG  231 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG  231 (313)
                       ..+++..+..+...|+.+|.+.+.+++.++.+.  .+  +.+..+.++
T Consensus       142 -~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~--~~~~~~R~~  185 (352)
T PLN02240        142 -VPCTEEFPLSATNPYGRTKLFIEEICRDIHASD--PE--WKIILLRYF  185 (352)
T ss_pred             -CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc--CC--CCEEEEeec
Confidence             123444555567789999999999999887542  23  555555554

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.79  E-value=1.1e-17  Score=159.21  Aligned_cols=197  Identities=13%  Similarity=0.130  Sum_probs=136.8

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhH----------------HHHHHHHHHhCCCCceEEE
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAG----------------KDVREAIVKEIPSAKVDAM   85 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~----------------~~~~~~l~~~~~~~~~~~~   85 (313)
                      ...-++++|++|||||+|+||++++++|+++|++|++++|.....                .+..+.+... .+.++.++
T Consensus        40 ~~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~~v  118 (442)
T PLN02572         40 GSSSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEV-SGKEIELY  118 (442)
T ss_pred             CCCccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHh-hCCcceEE
Confidence            345567889999999999999999999999999999987532110                0111111111 13468899


Q ss_pred             EccCCCHHHHHHHHHHHhhcCCCeeEEEEcccCCCCCC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCe
Q 021391           86 ELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGR  164 (313)
Q Consensus        86 ~~D~s~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~  164 (313)
                      .+|++|.+++.++++++     ++|+|||+|+....+. ..+.+.++..+++|+.+++++++++...-.        ..+
T Consensus       119 ~~Dl~d~~~v~~~l~~~-----~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv--------~~~  185 (442)
T PLN02572        119 VGDICDFEFLSEAFKSF-----EPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAP--------DCH  185 (442)
T ss_pred             ECCCCCHHHHHHHHHhC-----CCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCC--------Ccc
Confidence            99999999999888864     6999999997644332 334455677789999999999999865421        248


Q ss_pred             EEEECCccccccccCCCCCCCCC------CC---CCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCccccc
Q 021391          165 IVNVSSEAHRFAYSEGIRFDKIN------DE---SAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVT  235 (313)
Q Consensus       165 iv~isS~~~~~~~~~~~~~~~~~------~~---~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t  235 (313)
                      +|++||...+.......+...++      ++   .+..+...|+.||.+.+.+++.++..+   |  +.+..+.|+.+-.
T Consensus       186 ~V~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~---g--l~~v~lR~~~vyG  260 (442)
T PLN02572        186 LVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---G--IRATDLNQGVVYG  260 (442)
T ss_pred             EEEEecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhc---C--CCEEEEecccccC
Confidence            99999976543211000001110      11   134455689999999999888877654   4  8888999998877


Q ss_pred             CC
Q 021391          236 NL  237 (313)
Q Consensus       236 ~~  237 (313)
                      |.
T Consensus       261 p~  262 (442)
T PLN02572        261 VR  262 (442)
T ss_pred             CC
Confidence            65

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.78  E-value=5.6e-18  Score=156.41  Aligned_cols=226  Identities=14%  Similarity=0.050  Sum_probs=145.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhH-HHHHHHHHHh---CCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAG-KDVREAIVKE---IPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~-~~~~~~l~~~---~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      |++|||||+|+||++++++|+++|++|++++|+.+.. ......+...   ..+.++.++.+|++|.+++.++++.+   
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI---   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence            6899999999999999999999999999999876421 1111122111   11245889999999999999988865   


Q ss_pred             CCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCC
Q 021391          106 GRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDK  185 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  185 (313)
                        ++|+|||+|+.....  ...+.....+++|+.++.++++++.+.-.+      +..++|++||...+.. +..   ..
T Consensus        78 --~~d~ViH~Aa~~~~~--~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~------~~~~~v~~SS~~vyg~-~~~---~~  143 (343)
T TIGR01472        78 --KPTEIYNLAAQSHVK--VSFEIPEYTADVDGIGTLRLLEAVRTLGLI------KSVKFYQASTSELYGK-VQE---IP  143 (343)
T ss_pred             --CCCEEEECCcccccc--hhhhChHHHHHHHHHHHHHHHHHHHHhCCC------cCeeEEEeccHHhhCC-CCC---CC
Confidence              689999999975432  122334567789999999999999764211      1247899998765432 111   12


Q ss_pred             CCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCC-cEEEEEeeCcccccCCcccc-chhHhHHHH----------HHH
Q 021391          186 INDESAYNSFGAYGQSKLANILHAKELAKHLKEDGV-NITANSLHPGSIVTNLFRYN-GILRGFCNT----------VGK  253 (313)
Q Consensus       186 ~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~-~I~vn~i~PG~v~t~~~~~~-~~~~~~~~~----------~~~  253 (313)
                      +++..+..+...|+.||.+.+.+++.++.+++-... .+.+|...|+.-.+.+.... .+.......          ...
T Consensus       144 ~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~  223 (343)
T TIGR01472       144 QNETTPFYPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAK  223 (343)
T ss_pred             CCCCCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccc
Confidence            344455567788999999999999999887642210 13345555653211111000 001111000          001


Q ss_pred             hhcCChHHHHHHHHHHHcc
Q 021391          254 LVLKNIPQGAATTCYVALH  272 (313)
Q Consensus       254 ~~~~~~~eva~~~~~l~~~  272 (313)
                      .-+...+|++++++.++.+
T Consensus       224 rd~i~V~D~a~a~~~~~~~  242 (343)
T TIGR01472       224 RDWGHAKDYVEAMWLMLQQ  242 (343)
T ss_pred             cCceeHHHHHHHHHHHHhc
Confidence            1245789999999888864

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.78  E-value=4.1e-17  Score=148.25  Aligned_cols=215  Identities=14%  Similarity=0.079  Sum_probs=146.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC--CEEEEEecCchh-HHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           31 TAIVTGASSGIGTETARVLALRG--VHVIMAVRNMAA-GKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G--~~V~l~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      +++||||+|+||++++++|++.|  ++|++.+|.... ..+..+.+.   ...++.++.+|++|++++.++++..     
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~-----   72 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLE---DNPRYRFVKGDIGDRELVSRLFTEH-----   72 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhc---cCCCcEEEEcCCcCHHHHHHHHhhc-----
Confidence            48999999999999999999987  689888764311 111112221   1236788999999999998888753     


Q ss_pred             CeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCC
Q 021391          108 PLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIN  187 (313)
Q Consensus       108 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  187 (313)
                      ++|+|||+|+....  ..+.+..+..+++|+.++.++++++...+.        +.++|++||..........   ....
T Consensus        73 ~~d~vi~~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--------~~~~i~~Ss~~v~g~~~~~---~~~~  139 (317)
T TIGR01181        73 QPDAVVHFAAESHV--DRSISGPAAFIETNVVGTYTLLEAVRKYWH--------EFRFHHISTDEVYGDLEKG---DAFT  139 (317)
T ss_pred             CCCEEEEcccccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHhcCC--------CceEEEeeccceeCCCCCC---CCcC
Confidence            59999999987532  223456678899999999999988765432        3489999986543322110   0122


Q ss_pred             CCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHh-------------
Q 021391          188 DESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKL-------------  254 (313)
Q Consensus       188 ~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~-------------  254 (313)
                      +..+..+...|+.+|.+.+.+++.++.+.   +  +++..+.|+.+-.+......+...+.......             
T Consensus       140 e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  214 (317)
T TIGR01181       140 ETTPLAPSSPYSASKAASDHLVRAYHRTY---G--LPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVR  214 (317)
T ss_pred             CCCCCCCCCchHHHHHHHHHHHHHHHHHh---C--CCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEE
Confidence            33344456789999999999999987765   4  78888999988766433222222222211111             


Q ss_pred             hcCChHHHHHHHHHHHc
Q 021391          255 VLKNIPQGAATTCYVAL  271 (313)
Q Consensus       255 ~~~~~~eva~~~~~l~~  271 (313)
                      .....+|+++++..++.
T Consensus       215 ~~i~v~D~a~~~~~~~~  231 (317)
T TIGR01181       215 DWLYVEDHCRAIYLVLE  231 (317)
T ss_pred             eeEEHHHHHHHHHHHHc
Confidence            12357899999988886

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.77  E-value=2.8e-17  Score=151.42  Aligned_cols=222  Identities=14%  Similarity=0.089  Sum_probs=148.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      +++|++|||||+|+||++++++|+++|++|++++|+.+....... +.......++.++.+|++|.+++..+++      
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   79 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH-LRALQELGDLKIFGADLTDEESFEAPIA------   79 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH-HHhcCCCCceEEEEcCCCChHHHHHHHh------
Confidence            568999999999999999999999999999999888654332211 1110001257889999999988877765      


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccccc---CCCCC
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYS---EGIRF  183 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~~  183 (313)
                       ++|+|||+|+....   ...+.....+++|+.+..++++++.+..        ..+++|++||.+.....+   .....
T Consensus        80 -~~d~vih~A~~~~~---~~~~~~~~~~~~nv~g~~~ll~a~~~~~--------~~~~~v~~SS~~~~g~~~~~~~~~~~  147 (338)
T PLN00198         80 -GCDLVFHVATPVNF---ASEDPENDMIKPAIQGVHNVLKACAKAK--------SVKRVILTSSAAAVSINKLSGTGLVM  147 (338)
T ss_pred             -cCCEEEEeCCCCcc---CCCChHHHHHHHHHHHHHHHHHHHHhcC--------CccEEEEeecceeeeccCCCCCCcee
Confidence             58999999985321   1223345678999999999999986531        135999999987654221   01001


Q ss_pred             CCC--C----CCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--chh---HhHHH--H
Q 021391          184 DKI--N----DESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--GIL---RGFCN--T  250 (313)
Q Consensus       184 ~~~--~----~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--~~~---~~~~~--~  250 (313)
                      ++-  .    ..+..++...|+.||.+.+.+++.++.++   |  +++..+.|+.+-.|.....  .+.   .....  .
T Consensus       148 ~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~  222 (338)
T PLN00198        148 NEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEEN---N--IDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNE  222 (338)
T ss_pred             ccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHhc---C--ceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCc
Confidence            000  0    00123356679999999999988877653   5  8889999999877753211  111   00000  0


Q ss_pred             H--------H----HhhcCChHHHHHHHHHHHcc
Q 021391          251 V--------G----KLVLKNIPQGAATTCYVALH  272 (313)
Q Consensus       251 ~--------~----~~~~~~~~eva~~~~~l~~~  272 (313)
                      .        +    ..-+..++|++++++.++..
T Consensus       223 ~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~  256 (338)
T PLN00198        223 FLINGLKGMQMLSGSISITHVEDVCRAHIFLAEK  256 (338)
T ss_pred             cccccccccccccCCcceeEHHHHHHHHHHHhhC
Confidence            0        0    01357899999999999874

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.77  E-value=5.5e-17  Score=150.17  Aligned_cols=223  Identities=13%  Similarity=0.058  Sum_probs=150.3

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhC---CCCceEEEEccCCCHHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEI---PSAKVDAMELDVSSLASVRKF   98 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~---~~~~~~~~~~D~s~~~~v~~~   98 (313)
                      -..+-+++|++|||||+|.||.+++++|+++|++|++++|...........+....   ...++.++.+|+.|.+++..+
T Consensus         8 ~~~~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~   87 (348)
T PRK15181          8 RTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKA   87 (348)
T ss_pred             hhcccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHH
Confidence            34566788999999999999999999999999999999986543222222221111   123578899999998887777


Q ss_pred             HHHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccccc
Q 021391           99 ASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYS  178 (313)
Q Consensus        99 ~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~  178 (313)
                      ++       .+|+|||+|+....+.  ..++....+++|+.++.++++++...         .-.++|++||.......+
T Consensus        88 ~~-------~~d~ViHlAa~~~~~~--~~~~~~~~~~~Nv~gt~nll~~~~~~---------~~~~~v~~SS~~vyg~~~  149 (348)
T PRK15181         88 CK-------NVDYVLHQAALGSVPR--SLKDPIATNSANIDGFLNMLTAARDA---------HVSSFTYAASSSTYGDHP  149 (348)
T ss_pred             hh-------CCCEEEECccccCchh--hhhCHHHHHHHHHHHHHHHHHHHHHc---------CCCeEEEeechHhhCCCC
Confidence            65       5899999999654322  22334567999999999999988532         134899999875543222


Q ss_pred             CCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----chhHhHHHHHH--
Q 021391          179 EGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----GILRGFCNTVG--  252 (313)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~--  252 (313)
                       ...   +.++....+...|+.+|.+.+.+++.++.+.   |  +++..+.|+.+-.|.....    .+...+.....  
T Consensus       150 -~~~---~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~  220 (348)
T PRK15181        150 -DLP---KIEERIGRPLSPYAVTKYVNELYADVFARSY---E--FNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKD  220 (348)
T ss_pred             -CCC---CCCCCCCCCCChhhHHHHHHHHHHHHHHHHh---C--CCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcC
Confidence             111   1223334455689999999999888876554   5  8888999998877653221    11122211111  


Q ss_pred             -----------HhhcCChHHHHHHHHHHHc
Q 021391          253 -----------KLVLKNIPQGAATTCYVAL  271 (313)
Q Consensus       253 -----------~~~~~~~~eva~~~~~l~~  271 (313)
                                 ..-+...+|+|++++.++.
T Consensus       221 ~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~  250 (348)
T PRK15181        221 EPIYINGDGSTSRDFCYIENVIQANLLSAT  250 (348)
T ss_pred             CCcEEeCCCCceEeeEEHHHHHHHHHHHHh
Confidence                       0113568999999887664

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.77  E-value=9e-17  Score=148.80  Aligned_cols=225  Identities=11%  Similarity=0.042  Sum_probs=145.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCE-EEEEecCc--hhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           31 TAIVTGASSGIGTETARVLALRGVH-VIMAVRNM--AAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G~~-V~l~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      ++|||||+|+||++++++|+++|.+ |+.+++..  ...+.    +....++.+++++.+|++|.+++.+++++.     
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----   72 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLES----LADVSDSERYVFEHADICDRAELDRIFAQH-----   72 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHH----HHhcccCCceEEEEecCCCHHHHHHHHHhc-----
Confidence            6999999999999999999999986 55555432  11111    111112346788999999999999988753     


Q ss_pred             CeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC-----
Q 021391          108 PLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR-----  182 (313)
Q Consensus       108 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~-----  182 (313)
                      ++|+|||+|+.....  ...+..+.++++|+.++.++++++.++|.+.........++|++||...........+     
T Consensus        73 ~~d~vih~A~~~~~~--~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~  150 (352)
T PRK10084         73 QPDAVMHLAAESHVD--RSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSE  150 (352)
T ss_pred             CCCEEEECCcccCCc--chhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccc
Confidence            799999999865321  2234557789999999999999999876432100011348999988754432110000     


Q ss_pred             -CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHH------H---
Q 021391          183 -FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTV------G---  252 (313)
Q Consensus       183 -~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~------~---  252 (313)
                       ...+++..++.+...|+.||.+.+.+++.++.+++     +.+..+.|+.+-.|......+...+....      +   
T Consensus       151 ~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g-----~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~  225 (352)
T PRK10084        151 ELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTYG-----LPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYG  225 (352)
T ss_pred             cCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHhC-----CCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeC
Confidence             00133445566777899999999999999988765     44445666666554321111111111110      0   


Q ss_pred             ----HhhcCChHHHHHHHHHHHc
Q 021391          253 ----KLVLKNIPQGAATTCYVAL  271 (313)
Q Consensus       253 ----~~~~~~~~eva~~~~~l~~  271 (313)
                          ..-+..++|+++++..++.
T Consensus       226 ~g~~~~~~v~v~D~a~a~~~~l~  248 (352)
T PRK10084        226 KGDQIRDWLYVEDHARALYKVVT  248 (352)
T ss_pred             CCCeEEeeEEHHHHHHHHHHHHh
Confidence                1114578999999988876

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.75  E-value=1.8e-16  Score=144.87  Aligned_cols=216  Identities=21%  Similarity=0.185  Sum_probs=147.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      ++++||||+|+||+++++.|+++|++|++++|+.+.....        ....+.++.+|+++.+++.++++       .+
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~~~~~~~D~~~~~~l~~~~~-------~~   65 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL--------EGLDVEIVEGDLRDPASLRKAVA-------GC   65 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc--------ccCCceEEEeeCCCHHHHHHHHh-------CC
Confidence            4799999999999999999999999999999986543221        12358889999999998877775       58


Q ss_pred             eEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCC
Q 021391          110 NILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDE  189 (313)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~  189 (313)
                      |++||+++....    ..+..+..+++|+.++.++++++...         ..+++|++||.......+.+..   .+++
T Consensus        66 d~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~SS~~~~~~~~~~~~---~~e~  129 (328)
T TIGR03466        66 RALFHVAADYRL----WAPDPEEMYAANVEGTRNLLRAALEA---------GVERVVYTSSVATLGVRGDGTP---ADET  129 (328)
T ss_pred             CEEEEeceeccc----CCCCHHHHHHHHHHHHHHHHHHHHHh---------CCCeEEEEechhhcCcCCCCCC---cCcc
Confidence            999999975321    23456778999999999999987632         1358999999876543221111   2222


Q ss_pred             CCCC---ccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHH-----H-----Hhhc
Q 021391          190 SAYN---SFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTV-----G-----KLVL  256 (313)
Q Consensus       190 ~~~~---~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~-----~-----~~~~  256 (313)
                      .+..   ....|+.+|.+.+.+++.++.+.   |  +++..+.|+.+-.+...............     +     ....
T Consensus       130 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (328)
T TIGR03466       130 TPSSLDDMIGHYKRSKFLAEQAALEMAAEK---G--LPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNL  204 (328)
T ss_pred             CCCCcccccChHHHHHHHHHHHHHHHHHhc---C--CCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcce
Confidence            2222   24579999999999998887653   5  78888999888655432111111111100     0     0113


Q ss_pred             CChHHHHHHHHHHHccCCccCCCceeecC
Q 021391          257 KNIPQGAATTCYVALHPQVQGVSGEYFSD  285 (313)
Q Consensus       257 ~~~~eva~~~~~l~~~~~~~~~tG~~~~~  285 (313)
                      ...+|+|++++.++..+    ..|..+..
T Consensus       205 i~v~D~a~a~~~~~~~~----~~~~~~~~  229 (328)
T TIGR03466       205 VHVDDVAEGHLLALERG----RIGERYIL  229 (328)
T ss_pred             EEHHHHHHHHHHHHhCC----CCCceEEe
Confidence            46899999988888632    24555444

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02686 cinnamoyl-CoA reductase

Probab=99.74  E-value=3.9e-16  Score=145.48  Aligned_cols=228  Identities=13%  Similarity=0.054  Sum_probs=150.5

Q ss_pred             hhccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhC----CCCceEEEEccCCCHHHH
Q 021391           20 EVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEI----PSAKVDAMELDVSSLASV   95 (313)
Q Consensus        20 ~~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~----~~~~~~~~~~D~s~~~~v   95 (313)
                      -+....+.++|++|||||+|+||++++++|+++|++|+++.|+.+..+.+ +++....    ...++.++.+|++|.+++
T Consensus        44 ~~~~~~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l  122 (367)
T PLN02686         44 AGDAGADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESL  122 (367)
T ss_pred             ccccccCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHH
Confidence            34456678899999999999999999999999999999988887654443 2222110    012578899999999998


Q ss_pred             HHHHHHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc-c
Q 021391           96 RKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH-R  174 (313)
Q Consensus        96 ~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~-~  174 (313)
                      .++++       .+|.+||+++........  .......++|+.+..++++++...-        .-.++|++||.++ .
T Consensus       123 ~~~i~-------~~d~V~hlA~~~~~~~~~--~~~~~~~~~nv~gt~~llea~~~~~--------~v~r~V~~SS~~~~v  185 (367)
T PLN02686        123 HEAFD-------GCAGVFHTSAFVDPAGLS--GYTKSMAELEAKASENVIEACVRTE--------SVRKCVFTSSLLACV  185 (367)
T ss_pred             HHHHH-------hccEEEecCeeecccccc--cccchhhhhhHHHHHHHHHHHHhcC--------CccEEEEeccHHHhc
Confidence            88877       468999999875332110  1113456789999999998875321        1238999999742 2


Q ss_pred             ccc--cCCCCCCCCCCC------CCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--chh
Q 021391          175 FAY--SEGIRFDKINDE------SAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--GIL  244 (313)
Q Consensus       175 ~~~--~~~~~~~~~~~~------~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--~~~  244 (313)
                      ++.  +... ...+++.      ...++...|+.||.+.+.+++.++.+   .|  +++++++|+.+.+|.....  ...
T Consensus       186 yg~~~~~~~-~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~g--l~~v~lRp~~vyGp~~~~~~~~~~  259 (367)
T PLN02686        186 WRQNYPHDL-PPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KG--LKLATICPALVTGPGFFRRNSTAT  259 (367)
T ss_pred             ccccCCCCC-CcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cC--ceEEEEcCCceECCCCCCCCChhH
Confidence            221  1110 0111111      12224457999999999999887765   46  9999999999988854221  001


Q ss_pred             HhHHH----HHH--HhhcCChHHHHHHHHHHHc
Q 021391          245 RGFCN----TVG--KLVLKNIPQGAATTCYVAL  271 (313)
Q Consensus       245 ~~~~~----~~~--~~~~~~~~eva~~~~~l~~  271 (313)
                      .....    ...  ...+..++|++++++.++.
T Consensus       260 ~~~~~g~~~~~g~g~~~~v~V~Dva~A~~~al~  292 (367)
T PLN02686        260 IAYLKGAQEMLADGLLATADVERLAEAHVCVYE  292 (367)
T ss_pred             HHHhcCCCccCCCCCcCeEEHHHHHHHHHHHHh
Confidence            01110    001  1125679999999998886

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.74  E-value=3.7e-16  Score=143.77  Aligned_cols=179  Identities=18%  Similarity=0.142  Sum_probs=123.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      +++|||||+|+||++++++|+++|++|++++|..+........+.. .++.++.++.+|++|.+++..+++.     .++
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~   74 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIER-LGGKHPTFVEGDIRNEALLTEILHD-----HAI   74 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHH-hcCCCceEEEccCCCHHHHHHHHhc-----CCC
Confidence            3699999999999999999999999999988754333322222222 1234578889999999998887764     369


Q ss_pred             eEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCC
Q 021391          110 NILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDE  189 (313)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~  189 (313)
                      |+|||+|+.....  ...+.....+++|+.++.++++++...         +.+++|++||...+...+ .   ..+++.
T Consensus        75 d~vvh~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~Ss~~~yg~~~-~---~~~~E~  139 (338)
T PRK10675         75 DTVIHFAGLKAVG--ESVQKPLEYYDNNVNGTLRLISAMRAA---------NVKNLIFSSSATVYGDQP-K---IPYVES  139 (338)
T ss_pred             CEEEECCcccccc--chhhCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEeccHHhhCCCC-C---Cccccc
Confidence            9999999875322  122345567899999999998865422         235899999975442211 1   122333


Q ss_pred             CCC-CccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCccc
Q 021391          190 SAY-NSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSI  233 (313)
Q Consensus       190 ~~~-~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v  233 (313)
                      .+. .+...|+.+|.+.+.+++.++++...    +++..+.|+.+
T Consensus       140 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~----~~~~ilR~~~v  180 (338)
T PRK10675        140 FPTGTPQSPYGKSKLMVEQILTDLQKAQPD----WSIALLRYFNP  180 (338)
T ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHhcCC----CcEEEEEeeee
Confidence            332 35678999999999999998765432    55555555443

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.74  E-value=1.7e-16  Score=149.22  Aligned_cols=224  Identities=17%  Similarity=0.160  Sum_probs=174.1

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      ...-++||++|||||+|.||+++++++++.+. ++++.+|++.+.-....+++..++..+..++-+|+.|.+.++.++++
T Consensus       244 i~~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~  323 (588)
T COG1086         244 IGAMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEG  323 (588)
T ss_pred             HHhHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhc
Confidence            34448999999999999999999999999998 69999999999999999999988888999999999999999999986


Q ss_pred             HhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          102 YNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      .     ++|+++|+|..-.-|.  -+....+.+.+|+.|+.++++++...-.+         ++|++|+--+..      
T Consensus       324 ~-----kvd~VfHAAA~KHVPl--~E~nP~Eai~tNV~GT~nv~~aa~~~~V~---------~~V~iSTDKAV~------  381 (588)
T COG1086         324 H-----KVDIVFHAAALKHVPL--VEYNPEEAIKTNVLGTENVAEAAIKNGVK---------KFVLISTDKAVN------  381 (588)
T ss_pred             C-----CCceEEEhhhhccCcc--hhcCHHHHHHHhhHhHHHHHHHHHHhCCC---------EEEEEecCcccC------
Confidence            5     7999999998754443  34556778999999999999999877555         899999866554      


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchh-HhHHHHH--------H
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGIL-RGFCNTV--------G  252 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~-~~~~~~~--------~  252 (313)
                                  +-..|++||...+.++.+++.+....+  -++.++.-|.|-.....-.+.. +++.+.-        .
T Consensus       382 ------------PtNvmGaTKr~aE~~~~a~~~~~~~~~--T~f~~VRFGNVlGSrGSViPlFk~QI~~GgplTvTdp~m  447 (588)
T COG1086         382 ------------PTNVMGATKRLAEKLFQAANRNVSGTG--TRFCVVRFGNVLGSRGSVIPLFKKQIAEGGPLTVTDPDM  447 (588)
T ss_pred             ------------CchHhhHHHHHHHHHHHHHhhccCCCC--cEEEEEEecceecCCCCCHHHHHHHHHcCCCccccCCCc
Confidence                        356899999999999999998777655  7888999998865443322222 1211110        0


Q ss_pred             HhhcCChHHHHHHHHHHHccCCccCCCceeecCC
Q 021391          253 KLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDS  286 (313)
Q Consensus       253 ~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~  286 (313)
                      ...+-+.+|.++.++....    -...|+.+.-|
T Consensus       448 tRyfMTI~EAv~LVlqA~a----~~~gGeifvld  477 (588)
T COG1086         448 TRFFMTIPEAVQLVLQAGA----IAKGGEIFVLD  477 (588)
T ss_pred             eeEEEEHHHHHHHHHHHHh----hcCCCcEEEEc
Confidence            1123467778888777765    24567766644

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.74  E-value=3.3e-16  Score=136.36  Aligned_cols=218  Identities=19%  Similarity=0.201  Sum_probs=158.9

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCeeE
Q 021391           32 AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNI  111 (313)
Q Consensus        32 ~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~id~  111 (313)
                      ||||||+|.||.+++++|.++|..|+.+.|...........       .++.++.+|+.|.++++.+++..     .+|.
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~-------~~~~~~~~dl~~~~~~~~~~~~~-----~~d~   68 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK-------LNVEFVIGDLTDKEQLEKLLEKA-----NIDV   68 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH-------TTEEEEESETTSHHHHHHHHHHH-----TESE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc-------ceEEEEEeecccccccccccccc-----CceE
Confidence            79999999999999999999999999888876554332221       17899999999999999999986     8999


Q ss_pred             EEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCCCC
Q 021391          112 LINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESA  191 (313)
Q Consensus       112 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~  191 (313)
                      +||+|+...  ...+.+.....++.|+.+..++++.+...-         ..++|++||.... +.+   ....++++..
T Consensus        69 vi~~a~~~~--~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~---------~~~~i~~sS~~~y-~~~---~~~~~~e~~~  133 (236)
T PF01370_consen   69 VIHLAAFSS--NPESFEDPEEIIEANVQGTRNLLEAAREAG---------VKRFIFLSSASVY-GDP---DGEPIDEDSP  133 (236)
T ss_dssp             EEEEBSSSS--HHHHHHSHHHHHHHHHHHHHHHHHHHHHHT---------TSEEEEEEEGGGG-TSS---SSSSBETTSG
T ss_pred             EEEeecccc--cccccccccccccccccccccccccccccc---------ccccccccccccc-ccc---cccccccccc
Confidence            999998753  222336777888999999998888886442         2489999995433 322   1223344445


Q ss_pred             CCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCC---ccccchhHhHHHHHHHh-------------h
Q 021391          192 YNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNL---FRYNGILRGFCNTVGKL-------------V  255 (313)
Q Consensus       192 ~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~---~~~~~~~~~~~~~~~~~-------------~  255 (313)
                      ..+...|+.+|...+.+++.+..+.   +  +++..+.|+.+-.+.   .....+...+.......             .
T Consensus       134 ~~~~~~Y~~~K~~~e~~~~~~~~~~---~--~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (236)
T PF01370_consen  134 INPLSPYGASKRAAEELLRDYAKKY---G--LRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRD  208 (236)
T ss_dssp             CCHSSHHHHHHHHHHHHHHHHHHHH---T--SEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEE
T ss_pred             ccccccccccccccccccccccccc---c--cccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccc
Confidence            5667779999999999999988766   4  889999999997776   22223333333333211             1


Q ss_pred             cCChHHHHHHHHHHHccCCccCCCceeec
Q 021391          256 LKNIPQGAATTCYVALHPQVQGVSGEYFS  284 (313)
Q Consensus       256 ~~~~~eva~~~~~l~~~~~~~~~tG~~~~  284 (313)
                      ....+|+|+++++++.++.   ..|..++
T Consensus       209 ~i~v~D~a~~~~~~~~~~~---~~~~~yN  234 (236)
T PF01370_consen  209 FIHVDDLAEAIVAALENPK---AAGGIYN  234 (236)
T ss_dssp             EEEHHHHHHHHHHHHHHSC---TTTEEEE
T ss_pred             eEEHHHHHHHHHHHHhCCC---CCCCEEE
Confidence            3468899999999998654   3444444

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.73  E-value=5.5e-17  Score=145.51  Aligned_cols=228  Identities=18%  Similarity=0.143  Sum_probs=152.2

Q ss_pred             EEeCCCCchHHHHHHHHHHcC--CEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCee
Q 021391           33 IVTGASSGIGTETARVLALRG--VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLN  110 (313)
Q Consensus        33 lItGas~giG~aia~~La~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~id  110 (313)
                      |||||+|.||++++++|+++|  ++|.++++.......  ..+..   -....++.+|++|.+++.++++       ++|
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~~~---~~~~~~~~~Di~d~~~l~~a~~-------g~d   68 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDLQK---SGVKEYIQGDITDPESLEEALE-------GVD   68 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhhhc---ccceeEEEeccccHHHHHHHhc-------CCc
Confidence            699999999999999999999  689988886643221  11111   1223499999999999998887       689


Q ss_pred             EEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCCC
Q 021391          111 ILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDES  190 (313)
Q Consensus       111 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~  190 (313)
                      +|||+|+.....   .....+..+++|+.|+-++++++...-         -.++|++||.+.........+..+.++..
T Consensus        69 ~V~H~Aa~~~~~---~~~~~~~~~~vNV~GT~nvl~aa~~~~---------VkrlVytSS~~vv~~~~~~~~~~~~dE~~  136 (280)
T PF01073_consen   69 VVFHTAAPVPPW---GDYPPEEYYKVNVDGTRNVLEAARKAG---------VKRLVYTSSISVVFDNYKGDPIINGDEDT  136 (280)
T ss_pred             eEEEeCcccccc---CcccHHHHHHHHHHHHHHHHHHHHHcC---------CCEEEEEcCcceeEeccCCCCcccCCcCC
Confidence            999999875432   145677899999999999999987542         34999999998876533233333333433


Q ss_pred             CCC--ccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-chhHhHHHHH------HH----hhcC
Q 021391          191 AYN--SFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-GILRGFCNTV------GK----LVLK  257 (313)
Q Consensus       191 ~~~--~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-~~~~~~~~~~------~~----~~~~  257 (313)
                      +++  ....|+.||+..|.++......-.+.|..++..+|+|..|-.|..... +......+.-      ..    .-..
T Consensus       137 ~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~v  216 (280)
T PF01073_consen  137 PYPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFV  216 (280)
T ss_pred             cccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcE
Confidence            333  456899999999988777554111223349999999999977754322 1111111110      00    1134


Q ss_pred             ChHHHHHHHHHHHcc--CC--ccCCCceeec
Q 021391          258 NIPQGAATTCYVALH--PQ--VQGVSGEYFS  284 (313)
Q Consensus       258 ~~~eva~~~~~l~~~--~~--~~~~tG~~~~  284 (313)
                      .++.+|++.+..+..  ..  ...+.|+.+.
T Consensus       217 yV~NvA~ahvlA~~~L~~~~~~~~~~G~~y~  247 (280)
T PF01073_consen  217 YVENVAHAHVLAAQALLEPGKPERVAGQAYF  247 (280)
T ss_pred             eHHHHHHHHHHHHHHhccccccccCCCcEEE
Confidence            588999988765431  11  3457888444

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.73  E-value=1.4e-16  Score=140.79  Aligned_cols=205  Identities=19%  Similarity=0.117  Sum_probs=131.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCH-HHHHHHHHHHhhc
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSL-ASVRKFASEYNSQ  105 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~-~~v~~~~~~~~~~  105 (313)
                      ..+|++|||||+|+||++++++|+++|++|+++.|+.+......    ..  +.++.++.+|+++. +++   .+.+.  
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~----~~--~~~~~~~~~Dl~d~~~~l---~~~~~--   83 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSL----PQ--DPSLQIVRADVTEGSDKL---VEAIG--   83 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhc----cc--CCceEEEEeeCCCCHHHH---HHHhh--
Confidence            45789999999999999999999999999999999876543321    11  23688999999984 332   22220  


Q ss_pred             CCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCC
Q 021391          106 GRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDK  185 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  185 (313)
                       .++|+||+++|..... .     ....+++|+.+..++++++.    +     .+.++||++||..........     
T Consensus        84 -~~~d~vi~~~g~~~~~-~-----~~~~~~~n~~~~~~ll~a~~----~-----~~~~~iV~iSS~~v~g~~~~~-----  142 (251)
T PLN00141         84 -DDSDAVICATGFRRSF-D-----PFAPWKVDNFGTVNLVEACR----K-----AGVTRFILVSSILVNGAAMGQ-----  142 (251)
T ss_pred             -cCCCEEEECCCCCcCC-C-----CCCceeeehHHHHHHHHHHH----H-----cCCCEEEEEccccccCCCccc-----
Confidence             2699999999864221 1     12235788889888888874    2     224699999998643211100     


Q ss_pred             CCCCCCCCccccchHhHHHHHHHH-HHHHHH-hccCCCcEEEEEeeCcccccCCcccc-chhHhHHHHHHHhhcCChHHH
Q 021391          186 INDESAYNSFGAYGQSKLANILHA-KELAKH-LKEDGVNITANSLHPGSIVTNLFRYN-GILRGFCNTVGKLVLKNIPQG  262 (313)
Q Consensus       186 ~~~~~~~~~~~~Y~asK~a~~~l~-~~la~e-~~~~g~~I~vn~i~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~ev  262 (313)
                             .....|...|.+...+. +..+.+ +...|  ++++.|.||++.++..... .....   ........+++++
T Consensus       143 -------~~~~~~~~~~~~~~~~~~k~~~e~~l~~~g--i~~~iirpg~~~~~~~~~~~~~~~~---~~~~~~~i~~~dv  210 (251)
T PLN00141        143 -------ILNPAYIFLNLFGLTLVAKLQAEKYIRKSG--INYTIVRPGGLTNDPPTGNIVMEPE---DTLYEGSISRDQV  210 (251)
T ss_pred             -------ccCcchhHHHHHHHHHHHHHHHHHHHHhcC--CcEEEEECCCccCCCCCceEEECCC---CccccCcccHHHH
Confidence                   01234555554433322 222222 45567  9999999999976643211 00000   0011124689999


Q ss_pred             HHHHHHHHccCCc
Q 021391          263 AATTCYVALHPQV  275 (313)
Q Consensus       263 a~~~~~l~~~~~~  275 (313)
                      |+.++.++.++..
T Consensus       211 A~~~~~~~~~~~~  223 (251)
T PLN00141        211 AEVAVEALLCPES  223 (251)
T ss_pred             HHHHHHHhcChhh
Confidence            9999999985543

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.71  E-value=6.8e-17  Score=143.02  Aligned_cols=212  Identities=19%  Similarity=0.218  Sum_probs=146.2

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceE----EEEccCCCHHHHHHHHHHHhhcC
Q 021391           32 AIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVD----AMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        32 ~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~----~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      ||||||+|-||+.++++|++.+. +|++++|++.++-++..++...+++.++.    .+.+|+.|.+.++.++++.    
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~----   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY----   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence            79999999999999999999996 79999999999999999887766554443    4588999999998888865    


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                       ++|+|+|.|..-..+.  -++...+.+++|+.|+.++++++..+-.+         ++|++|+--+..           
T Consensus        77 -~pdiVfHaAA~KhVpl--~E~~p~eav~tNv~GT~nv~~aa~~~~v~---------~~v~ISTDKAv~-----------  133 (293)
T PF02719_consen   77 -KPDIVFHAAALKHVPL--MEDNPFEAVKTNVLGTQNVAEAAIEHGVE---------RFVFISTDKAVN-----------  133 (293)
T ss_dssp             -T-SEEEE------HHH--HCCCHHHHHHHHCHHHHHHHHHHHHTT-S---------EEEEEEECGCSS-----------
T ss_pred             -CCCEEEEChhcCCCCh--HHhCHHHHHHHHHHHHHHHHHHHHHcCCC---------EEEEccccccCC-----------
Confidence             8999999998644333  33566788999999999999999876444         899999865543           


Q ss_pred             CCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHH------------h
Q 021391          187 NDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGK------------L  254 (313)
Q Consensus       187 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~------------~  254 (313)
                             +...|++||...|.++.+++...+..+  .++.+|.-|.|......   ..+-+.+++..            .
T Consensus       134 -------PtnvmGatKrlaE~l~~~~~~~~~~~~--t~f~~VRFGNVlgS~GS---Vip~F~~Qi~~g~PlTvT~p~mtR  201 (293)
T PF02719_consen  134 -------PTNVMGATKRLAEKLVQAANQYSGNSD--TKFSSVRFGNVLGSRGS---VIPLFKKQIKNGGPLTVTDPDMTR  201 (293)
T ss_dssp             ---------SHHHHHHHHHHHHHHHHCCTSSSS----EEEEEEE-EETTGTTS---CHHHHHHHHHTTSSEEECETT-EE
T ss_pred             -------CCcHHHHHHHHHHHHHHHHhhhCCCCC--cEEEEEEecceecCCCc---HHHHHHHHHHcCCcceeCCCCcEE
Confidence                   456899999999999999998886666  88889999988543221   12222222221            2


Q ss_pred             hcCChHHHHHHHHHHHccCCccCCCceeecCC
Q 021391          255 VLKNIPQGAATTCYVALHPQVQGVSGEYFSDS  286 (313)
Q Consensus       255 ~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~  286 (313)
                      .+.+++|.++.++..+..    ...|+++..+
T Consensus       202 ffmti~EAv~Lvl~a~~~----~~~geifvl~  229 (293)
T PF02719_consen  202 FFMTIEEAVQLVLQAAAL----AKGGEIFVLD  229 (293)
T ss_dssp             EEE-HHHHHHHHHHHHHH------TTEEEEE-
T ss_pred             EEecHHHHHHHHHHHHhh----CCCCcEEEec
Confidence            345788888888888752    2356766544

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.70  E-value=1.8e-15  Score=138.01  Aligned_cols=179  Identities=20%  Similarity=0.216  Sum_probs=127.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCee
Q 021391           31 TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLN  110 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~id  110 (313)
                      ++|||||+|+||++++++|+++|++|++++|...........+..   ..++..+.+|+++.+++.++++.     +++|
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~-----~~~d   72 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGER---ITRVTFVEGDLRDRELLDRLFEE-----HKID   72 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcc---ccceEEEECCCCCHHHHHHHHHh-----CCCc
Confidence            479999999999999999999999999887654332222222211   11577889999999999888874     3799


Q ss_pred             EEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCCC
Q 021391          111 ILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDES  190 (313)
Q Consensus       111 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~  190 (313)
                      ++|||+|.....  ...+.....++.|+.++..+++++...         ...++|++||.... +.+..   ..+++..
T Consensus        73 ~vv~~ag~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~ss~~~~-g~~~~---~~~~e~~  137 (328)
T TIGR01179        73 AVIHFAGLIAVG--ESVQDPLKYYRNNVVNTLNLLEAMQQT---------GVKKFIFSSSAAVY-GEPSS---IPISEDS  137 (328)
T ss_pred             EEEECccccCcc--hhhcCchhhhhhhHHHHHHHHHHHHhc---------CCCEEEEecchhhc-CCCCC---CCccccC
Confidence            999999975332  233455677899999999998875422         13589999886543 22211   1133334


Q ss_pred             CCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccC
Q 021391          191 AYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTN  236 (313)
Q Consensus       191 ~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~  236 (313)
                      +..+...|+.+|++++.+++.++.+.  .+  +++..+.|+.+-.+
T Consensus       138 ~~~~~~~y~~sK~~~e~~~~~~~~~~--~~--~~~~ilR~~~v~g~  179 (328)
T TIGR01179       138 PLGPINPYGRSKLMSERILRDLSKAD--PG--LSYVILRYFNVAGA  179 (328)
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHhc--cC--CCEEEEecCcccCC
Confidence            44466789999999999999987652  24  78888998777554

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.70  E-value=2.1e-15  Score=139.60  Aligned_cols=229  Identities=21%  Similarity=0.222  Sum_probs=142.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC--CEEEEEecCchhH---HHHHHHHHHhC---C--C-CceEEEEccCCCHH------
Q 021391           31 TAIVTGASSGIGTETARVLALRG--VHVIMAVRNMAAG---KDVREAIVKEI---P--S-AKVDAMELDVSSLA------   93 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G--~~V~l~~r~~~~~---~~~~~~l~~~~---~--~-~~~~~~~~D~s~~~------   93 (313)
                      ++|||||||+||++++++|+++|  ++|+++.|+.+..   +...+.+....   .  . .++.++.+|++++.      
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999999  7899999976532   12222222110   0  1 47899999998753      


Q ss_pred             HHHHHHHHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391           94 SVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus        94 ~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                      ....+.       ..+|++||||+....     ...++...++|+.++..+++.+...         ...+++++||...
T Consensus        81 ~~~~~~-------~~~d~vih~a~~~~~-----~~~~~~~~~~nv~g~~~ll~~a~~~---------~~~~~v~iSS~~v  139 (367)
T TIGR01746        81 EWERLA-------ENVDTIVHNGALVNW-----VYPYSELRAANVLGTREVLRLAASG---------RAKPLHYVSTISV  139 (367)
T ss_pred             HHHHHH-------hhCCEEEeCCcEecc-----CCcHHHHhhhhhHHHHHHHHHHhhC---------CCceEEEEccccc
Confidence            222222       369999999986532     1345677889999999998877532         1236999999876


Q ss_pred             cccccCCC-CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcc----ccchhHhHH
Q 021391          174 RFAYSEGI-RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR----YNGILRGFC  248 (313)
Q Consensus       174 ~~~~~~~~-~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~----~~~~~~~~~  248 (313)
                      ........ ..++............|+.+|.+.+.+++.++.    .|  ++++.+.||.+.++...    ...+.....
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g--~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~  213 (367)
T TIGR01746       140 LAAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RG--LPVTIVRPGRILGNSYTGAINSSDILWRMV  213 (367)
T ss_pred             cCCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHHh----cC--CCEEEECCCceeecCCCCCCCchhHHHHHH
Confidence            54321110 000000011112345799999999988876543    36  99999999999765221    111221221


Q ss_pred             HHH------H-----HhhcCChHHHHHHHHHHHccCCccCCCceeecCCc
Q 021391          249 NTV------G-----KLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSN  287 (313)
Q Consensus       249 ~~~------~-----~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~  287 (313)
                      ...      +     ......+++++++++.++..+ ....+|..+...+
T Consensus       214 ~~~~~~~~~p~~~~~~~~~~~vddva~ai~~~~~~~-~~~~~~~~~~v~~  262 (367)
T TIGR01746       214 KGCLALGAYPDSPELTEDLTPVDYVARAIVALSSQP-AASAGGPVFHVVN  262 (367)
T ss_pred             HHHHHhCCCCCCCccccCcccHHHHHHHHHHHHhCC-CcccCCceEEecC
Confidence            111      0     011467889999999998743 2223355555433

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.69  E-value=4.4e-15  Score=129.30  Aligned_cols=246  Identities=17%  Similarity=0.138  Sum_probs=166.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCc-hhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           30 LTAIVTGASSGIGTETARVLALRGV--HVIMAVRNM-AAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~--~V~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      +++|||||.|.||.++++.+.++..  +|+.++.=. ..-.+..+.+..   ..+..|++.|+.|.+.+.+++++.    
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~---~~~~~fv~~DI~D~~~v~~~~~~~----   73 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVED---SPRYRFVQGDICDRELVDRLFKEY----   73 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhc---CCCceEEeccccCHHHHHHHHHhc----
Confidence            5799999999999999999999865  467776522 111122222221   458999999999999999998865    


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                       .+|++||-|.-+.  .+.+.++.+..+++|++|++.|++++..+..+        .+++.||.--.....+.  +...+
T Consensus        74 -~~D~VvhfAAESH--VDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~--------frf~HISTDEVYG~l~~--~~~~F  140 (340)
T COG1088          74 -QPDAVVHFAAESH--VDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK--------FRFHHISTDEVYGDLGL--DDDAF  140 (340)
T ss_pred             -CCCeEEEechhcc--ccccccChhhhhhcchHHHHHHHHHHHHhccc--------ceEEEeccccccccccC--CCCCc
Confidence             7999999997432  36678888899999999999999999888643        48899987543322211  11246


Q ss_pred             CCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHH-HHHHHh-----------
Q 021391          187 NDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFC-NTVGKL-----------  254 (313)
Q Consensus       187 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~-~~~~~~-----------  254 (313)
                      .+..++++.++|++||++...|+|++.+.++     +.+....+..--.|.+-...+.+... +.+...           
T Consensus       141 tE~tp~~PsSPYSASKAasD~lVray~~TYg-----lp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~i  215 (340)
T COG1088         141 TETTPYNPSSPYSASKAASDLLVRAYVRTYG-----LPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQI  215 (340)
T ss_pred             ccCCCCCCCCCcchhhhhHHHHHHHHHHHcC-----CceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcce
Confidence            6788999999999999999999999999887     55555555443333332211111111 111000           


Q ss_pred             -hcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCCccCCCHHHHHHHHHHH
Q 021391          255 -VLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMELAKKLWDFS  308 (313)
Q Consensus       255 -~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (313)
                       -..-++|=+.++...+..    +.-|+..+++|...    ..+.+..+.+-+.+
T Consensus       216 RDWl~VeDh~~ai~~Vl~k----g~~GE~YNIgg~~E----~~Nlevv~~i~~~l  262 (340)
T COG1088         216 RDWLYVEDHCRAIDLVLTK----GKIGETYNIGGGNE----RTNLEVVKTICELL  262 (340)
T ss_pred             eeeEEeHhHHHHHHHHHhc----CcCCceEEeCCCcc----chHHHHHHHHHHHh
Confidence             023467778888888762    33488888776543    24555555444443

>PLN02427 UDP-apiose/xylose synthase

Probab=99.67  E-value=7.5e-15  Score=137.78  Aligned_cols=222  Identities=13%  Similarity=0.087  Sum_probs=140.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHc-CCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALR-GVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      .++.++||||||+|.||++++++|+++ |++|++++|+.+............. ..++.++.+|++|.+.+.++++    
T Consensus        11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~-~~~~~~~~~Dl~d~~~l~~~~~----   85 (386)
T PLN02427         11 PIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPW-SGRIQFHRINIKHDSRLEGLIK----   85 (386)
T ss_pred             cccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccC-CCCeEEEEcCCCChHHHHHHhh----
Confidence            356678999999999999999999998 5899999987654433221100001 2368899999999988877765    


Q ss_pred             cCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC-CC
Q 021391          105 QGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI-RF  183 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~-~~  183 (313)
                         .+|+|||+|+......  ..+.-...+..|+.+..++++++...          +.++|++||...+....... +.
T Consensus        86 ---~~d~ViHlAa~~~~~~--~~~~~~~~~~~n~~gt~~ll~aa~~~----------~~r~v~~SS~~vYg~~~~~~~~e  150 (386)
T PLN02427         86 ---MADLTINLAAICTPAD--YNTRPLDTIYSNFIDALPVVKYCSEN----------NKRLIHFSTCEVYGKTIGSFLPK  150 (386)
T ss_pred             ---cCCEEEEcccccChhh--hhhChHHHHHHHHHHHHHHHHHHHhc----------CCEEEEEeeeeeeCCCcCCCCCc
Confidence               4799999998653321  11222345678999999998877422          24899999976442211100 00


Q ss_pred             C-CC---------CCC-CC--C----CccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccc------
Q 021391          184 D-KI---------NDE-SA--Y----NSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY------  240 (313)
Q Consensus       184 ~-~~---------~~~-~~--~----~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~------  240 (313)
                      + .+         .+. ..  +    .+...|+.+|.+.+.+++.++..   .|  +.+..+.|+.+-.+....      
T Consensus       151 ~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g--~~~~ilR~~~vyGp~~~~~~~~~~  225 (386)
T PLN02427        151 DHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NG--LEFTIVRPFNWIGPRMDFIPGIDG  225 (386)
T ss_pred             ccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cC--CceEEecccceeCCCCCccccccc
Confidence            0 00         000 00  0    12346999999999888776543   35  888899999887764310      


Q ss_pred             -c----chhHhHHHHHH-------------HhhcCChHHHHHHHHHHHcc
Q 021391          241 -N----GILRGFCNTVG-------------KLVLKNIPQGAATTCYVALH  272 (313)
Q Consensus       241 -~----~~~~~~~~~~~-------------~~~~~~~~eva~~~~~l~~~  272 (313)
                       .    .+...+.....             ..-+...+|+|++++.++.+
T Consensus       226 ~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~  275 (386)
T PLN02427        226 PSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIEN  275 (386)
T ss_pred             cccccchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhC
Confidence             0    11111111110             01246789999999988864

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.67  E-value=2.3e-15  Score=131.56  Aligned_cols=161  Identities=22%  Similarity=0.217  Sum_probs=129.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      +++|||||+|-||++++.+|++.|+.|++++.-...-.+....+       ...+++.|+.|.+.+++++++.     +|
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~-------~~~f~~gDi~D~~~L~~vf~~~-----~i   68 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL-------QFKFYEGDLLDRALLTAVFEEN-----KI   68 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc-------cCceEEeccccHHHHHHHHHhc-----CC
Confidence            57999999999999999999999999999998665544443321       1679999999999999999875     89


Q ss_pred             eEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCC
Q 021391          110 NILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDE  189 (313)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~  189 (313)
                      |.|+|-||...-  ..+.+...+.++-|+.+++.|++++...-.+         + +++||.++.++.|..   ..+.+.
T Consensus        69 daViHFAa~~~V--gESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~---------~-~vFSStAavYG~p~~---~PI~E~  133 (329)
T COG1087          69 DAVVHFAASISV--GESVQNPLKYYDNNVVGTLNLIEAMLQTGVK---------K-FIFSSTAAVYGEPTT---SPISET  133 (329)
T ss_pred             CEEEECcccccc--chhhhCHHHHHhhchHhHHHHHHHHHHhCCC---------E-EEEecchhhcCCCCC---cccCCC
Confidence            999999996433  4567788899999999999999998766433         4 556666778777744   345566


Q ss_pred             CCCCccccchHhHHHHHHHHHHHHHHhc
Q 021391          190 SAYNSFGAYGQSKLANILHAKELAKHLK  217 (313)
Q Consensus       190 ~~~~~~~~Y~asK~a~~~l~~~la~e~~  217 (313)
                      .+..+..+|+.||.+.|.+.+.++....
T Consensus       134 ~~~~p~NPYG~sKlm~E~iL~d~~~a~~  161 (329)
T COG1087         134 SPLAPINPYGRSKLMSEEILRDAAKANP  161 (329)
T ss_pred             CCCCCCCcchhHHHHHHHHHHHHHHhCC
Confidence            6666778899999999999999887665

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.64  E-value=3.1e-14  Score=131.70  Aligned_cols=221  Identities=11%  Similarity=0.062  Sum_probs=141.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc-CCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCC-CHHHHHHHHHHHhhcCC
Q 021391           30 LTAIVTGASSGIGTETARVLALR-GVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS-SLASVRKFASEYNSQGR  107 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s-~~~~v~~~~~~~~~~~g  107 (313)
                      |+||||||+|.||++++++|+++ |++|++++|+.+....    +.   +...+.++.+|++ +.+.+..+++       
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~----~~---~~~~~~~~~~Dl~~~~~~~~~~~~-------   67 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGD----LV---NHPRMHFFEGDITINKEWIEYHVK-------   67 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHH----hc---cCCCeEEEeCCCCCCHHHHHHHHc-------
Confidence            57999999999999999999986 6999999987543221    11   1235889999998 6665555443       


Q ss_pred             CeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCC
Q 021391          108 PLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIN  187 (313)
Q Consensus       108 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  187 (313)
                      ++|+|||+|+...+..  ..++.+..+++|+.+..++++++...          +.++|++||...+.... ..   .++
T Consensus        68 ~~d~ViH~aa~~~~~~--~~~~p~~~~~~n~~~~~~ll~aa~~~----------~~~~v~~SS~~vyg~~~-~~---~~~  131 (347)
T PRK11908         68 KCDVILPLVAIATPAT--YVKQPLRVFELDFEANLPIVRSAVKY----------GKHLVFPSTSEVYGMCP-DE---EFD  131 (347)
T ss_pred             CCCEEEECcccCChHH--hhcCcHHHHHHHHHHHHHHHHHHHhc----------CCeEEEEecceeeccCC-Cc---CcC
Confidence            5899999998754321  22344677899999999988887532          24899999976443211 11   111


Q ss_pred             CCC------C-CCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccc--------cchhHhHHHHHH
Q 021391          188 DES------A-YNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY--------NGILRGFCNTVG  252 (313)
Q Consensus       188 ~~~------~-~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~--------~~~~~~~~~~~~  252 (313)
                      ++.      + .++...|+.+|.+.+.+++.++.+.   |  +.+..+.|+.+-.+....        ..+...+.....
T Consensus       132 ee~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~  206 (347)
T PRK11908        132 PEASPLVYGPINKPRWIYACSKQLMDRVIWAYGMEE---G--LNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIV  206 (347)
T ss_pred             ccccccccCcCCCccchHHHHHHHHHHHHHHHHHHc---C--CCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHh
Confidence            111      1 1234479999999999888877543   4  566677787665543211        111111111110


Q ss_pred             -------------HhhcCChHHHHHHHHHHHccCCccCCCceeecCC
Q 021391          253 -------------KLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDS  286 (313)
Q Consensus       253 -------------~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~  286 (313)
                                   ..-+...+|++++++.++.++.. ...|+.++..
T Consensus       207 ~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~~~~-~~~g~~yni~  252 (347)
T PRK11908        207 RGEPISLVDGGSQKRAFTDIDDGIDALMKIIENKDG-VASGKIYNIG  252 (347)
T ss_pred             CCCceEEecCCceeeccccHHHHHHHHHHHHhCccc-cCCCCeEEeC
Confidence                         11257889999999999874321 1234544443

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.63  E-value=1.6e-14  Score=131.03  Aligned_cols=211  Identities=19%  Similarity=0.163  Sum_probs=143.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCee
Q 021391           31 TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLN  110 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~id  110 (313)
                      .||||||+|.||++++++|+++|++|+.++|.........         ..+.++.+|+++.+.+..+++..     . |
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~d~~~~~~~~~~~~~~-----~-d   66 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL---------SGVEFVVLDLTDRDLVDELAKGV-----P-D   66 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc---------cccceeeecccchHHHHHHHhcC-----C-C
Confidence            3999999999999999999999999999999765543221         25778999999986665555532     2 9


Q ss_pred             EEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCC-
Q 021391          111 ILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDE-  189 (313)
Q Consensus       111 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~-  189 (313)
                      ++||+++.......... .....+.+|+.++.++++++...  .       ..++|+.||.+...+.....   .+++. 
T Consensus        67 ~vih~aa~~~~~~~~~~-~~~~~~~~nv~gt~~ll~aa~~~--~-------~~~~v~~ss~~~~~~~~~~~---~~~E~~  133 (314)
T COG0451          67 AVIHLAAQSSVPDSNAS-DPAEFLDVNVDGTLNLLEAARAA--G-------VKRFVFASSVSVVYGDPPPL---PIDEDL  133 (314)
T ss_pred             EEEEccccCchhhhhhh-CHHHHHHHHHHHHHHHHHHHHHc--C-------CCeEEEeCCCceECCCCCCC---Cccccc
Confidence            99999997655432222 55678999999999999999761  1       45888866655554331111   12222 


Q ss_pred             CCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc---chhHhH----HHHHH-Hh-------
Q 021391          190 SAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN---GILRGF----CNTVG-KL-------  254 (313)
Q Consensus       190 ~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~---~~~~~~----~~~~~-~~-------  254 (313)
                      .+..+...|+.+|.+.+.+++.++.   ..|  +.+..+.|+.+-.+.....   .+....    ....+ ..       
T Consensus       134 ~~~~p~~~Yg~sK~~~E~~~~~~~~---~~~--~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (314)
T COG0451         134 GPPRPLNPYGVSKLAAEQLLRAYAR---LYG--LPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQ  208 (314)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHH---HhC--CCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCce
Confidence            2333334799999999999999888   445  7888899987765543322   112211    11111 00       


Q ss_pred             --hcCChHHHHHHHHHHHccCC
Q 021391          255 --VLKNIPQGAATTCYVALHPQ  274 (313)
Q Consensus       255 --~~~~~~eva~~~~~l~~~~~  274 (313)
                        .....+|++++++.++.++.
T Consensus       209 ~~~~i~v~D~a~~~~~~~~~~~  230 (314)
T COG0451         209 TRDFVYVDDVADALLLALENPD  230 (314)
T ss_pred             eEeeEeHHHHHHHHHHHHhCCC
Confidence              13447899999999998543

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.63  E-value=2.8e-14  Score=142.96  Aligned_cols=221  Identities=13%  Similarity=0.018  Sum_probs=145.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHc--CCEEEEEecCc--hhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHH
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALR--GVHVIMAVRNM--AAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~--G~~V~l~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      ..++|+||||||+|.||++++++|+++  |++|+.++|..  +....    +.......++.++.+|++|.+.+..++..
T Consensus         3 ~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~----l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~   78 (668)
T PLN02260          3 TYEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKN----LNPSKSSPNFKFVKGDIASADLVNYLLIT   78 (668)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhh----hhhcccCCCeEEEECCCCChHHHHHHHhh
Confidence            457799999999999999999999998  67899888742  12211    11111134688999999999887766543


Q ss_pred             HhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          102 YNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                           .++|+|||+|+.....  ...+.....+++|+.++.++++++...        +...++|++||...+.... ..
T Consensus        79 -----~~~D~ViHlAa~~~~~--~~~~~~~~~~~~Nv~gt~~ll~a~~~~--------~~vkr~I~~SS~~vyg~~~-~~  142 (668)
T PLN02260         79 -----EGIDTIMHFAAQTHVD--NSFGNSFEFTKNNIYGTHVLLEACKVT--------GQIRRFIHVSTDEVYGETD-ED  142 (668)
T ss_pred             -----cCCCEEEECCCccCch--hhhhCHHHHHHHHHHHHHHHHHHHHhc--------CCCcEEEEEcchHHhCCCc-cc
Confidence                 2799999999975332  122334567899999999999887532        1135899999976543211 11


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHH--------
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGK--------  253 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~--------  253 (313)
                      .....++.....+...|+.+|.+.+.+++.++.++   +  +.+..+.|+.+-.+......+...+......        
T Consensus       143 ~~~~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~---~--l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g  217 (668)
T PLN02260        143 ADVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---G--LPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHG  217 (668)
T ss_pred             cccCccccCCCCCCCCcHHHHHHHHHHHHHHHHHc---C--CCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEec
Confidence            11111222333355689999999999998877654   4  7778899988866543221112211111110        


Q ss_pred             -----hhcCChHHHHHHHHHHHc
Q 021391          254 -----LVLKNIPQGAATTCYVAL  271 (313)
Q Consensus       254 -----~~~~~~~eva~~~~~l~~  271 (313)
                           ..+...+|+|+++..++.
T Consensus       218 ~g~~~r~~ihV~Dva~a~~~~l~  240 (668)
T PLN02260        218 DGSNVRSYLYCEDVAEAFEVVLH  240 (668)
T ss_pred             CCCceEeeEEHHHHHHHHHHHHh
Confidence                 113568999999988875

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.63  E-value=3.5e-14  Score=141.87  Aligned_cols=223  Identities=11%  Similarity=0.059  Sum_probs=145.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHc-CCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHH-HHHHHHHHhh
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALR-GVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLAS-VRKFASEYNS  104 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~-v~~~~~~~~~  104 (313)
                      .++|+||||||+|.||++++++|+++ |++|+.++|+.......       ....++.++.+|++|..+ ++++++    
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~-------~~~~~~~~~~gDl~d~~~~l~~~l~----  381 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF-------LGHPRFHFVEGDISIHSEWIEYHIK----  381 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhh-------cCCCceEEEeccccCcHHHHHHHhc----
Confidence            57789999999999999999999986 79999999976432211       112368889999999654 343333    


Q ss_pred             cCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCC
Q 021391          105 QGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFD  184 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  184 (313)
                         ++|+|||+|+......  ..+..+..+++|+.+..++++++...          +.++|++||...+ +.+...   
T Consensus       382 ---~~D~ViHlAa~~~~~~--~~~~~~~~~~~Nv~~t~~ll~a~~~~----------~~~~V~~SS~~vy-g~~~~~---  442 (660)
T PRK08125        382 ---KCDVVLPLVAIATPIE--YTRNPLRVFELDFEENLKIIRYCVKY----------NKRIIFPSTSEVY-GMCTDK---  442 (660)
T ss_pred             ---CCCEEEECccccCchh--hccCHHHHHHhhHHHHHHHHHHHHhc----------CCeEEEEcchhhc-CCCCCC---
Confidence               6899999999754321  12334567899999999999988642          2489999997544 221111   


Q ss_pred             CCCCCC------CC-CccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccc--------cchhHhHHH
Q 021391          185 KINDES------AY-NSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY--------NGILRGFCN  249 (313)
Q Consensus       185 ~~~~~~------~~-~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~--------~~~~~~~~~  249 (313)
                      .+++..      +. .+...|+.||.+.+.+++.++.++   |  +++..+.|+.+-.|....        ......+..
T Consensus       443 ~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~---g--~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~  517 (660)
T PRK08125        443 YFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKE---G--LRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLIL  517 (660)
T ss_pred             CcCccccccccCCCCCCccchHHHHHHHHHHHHHHHHhc---C--CceEEEEEceeeCCCccccccccccccchHHHHHH
Confidence            122211      11 234579999999999998876654   4  778888898887664321        011111111


Q ss_pred             HHH-------------HhhcCChHHHHHHHHHHHccCCccCCCceeecC
Q 021391          250 TVG-------------KLVLKNIPQGAATTCYVALHPQVQGVSGEYFSD  285 (313)
Q Consensus       250 ~~~-------------~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~  285 (313)
                      ...             ..-+...+|++++++.++.++. ....|+.++.
T Consensus       518 ~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l~~~~-~~~~g~iyni  565 (660)
T PRK08125        518 NLVEGSPIKLVDGGKQKRCFTDIRDGIEALFRIIENKD-NRCDGQIINI  565 (660)
T ss_pred             HhcCCCCeEEeCCCceeeceeeHHHHHHHHHHHHhccc-cccCCeEEEc
Confidence            110             1124578999999988886432 1224554443

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.62  E-value=5e-14  Score=128.02  Aligned_cols=206  Identities=17%  Similarity=0.159  Sum_probs=132.0

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh--cCCCe
Q 021391           32 AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS--QGRPL  109 (313)
Q Consensus        32 ~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~--~~g~i  109 (313)
                      +|||||+|.||++++++|+++|++++++.|+.......            ..+..+|+.|..+.+.+++++.+  .++++
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   69 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF------------VNLVDLDIADYMDKEDFLAQIMAGDDFGDI   69 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH------------HhhhhhhhhhhhhHHHHHHHHhcccccCCc
Confidence            79999999999999999999999766666554322110            01234577776666666665532  34579


Q ss_pred             eEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCC
Q 021391          110 NILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDE  189 (313)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~  189 (313)
                      |+|||+|+......   . +.+..++.|+.++.++++++...          +.++|++||...+.... .   ..+++.
T Consensus        70 d~Vih~A~~~~~~~---~-~~~~~~~~n~~~t~~ll~~~~~~----------~~~~i~~SS~~vyg~~~-~---~~~~E~  131 (308)
T PRK11150         70 EAIFHEGACSSTTE---W-DGKYMMDNNYQYSKELLHYCLER----------EIPFLYASSAATYGGRT-D---DFIEER  131 (308)
T ss_pred             cEEEECceecCCcC---C-ChHHHHHHHHHHHHHHHHHHHHc----------CCcEEEEcchHHhCcCC-C---CCCccC
Confidence            99999998643321   1 22457899999999999988532          23799999976543211 1   123333


Q ss_pred             CCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----hhHhHHHHHHH------------
Q 021391          190 SAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----ILRGFCNTVGK------------  253 (313)
Q Consensus       190 ~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----~~~~~~~~~~~------------  253 (313)
                      ....+...|+.+|.+.+.+++.++.+.   +  +.+..+.|+.+-.+......    ....+......            
T Consensus       132 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~  206 (308)
T PRK11150        132 EYEKPLNVYGYSKFLFDEYVRQILPEA---N--SQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSEN  206 (308)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHc---C--CCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCc
Confidence            444556789999999999888776543   4  77788888877665432111    11111111110            


Q ss_pred             --hhcCChHHHHHHHHHHHcc
Q 021391          254 --LVLKNIPQGAATTCYVALH  272 (313)
Q Consensus       254 --~~~~~~~eva~~~~~l~~~  272 (313)
                        .-+...+|+|++++.++.+
T Consensus       207 ~~r~~i~v~D~a~a~~~~~~~  227 (308)
T PRK11150        207 FKRDFVYVGDVAAVNLWFWEN  227 (308)
T ss_pred             eeeeeeeHHHHHHHHHHHHhc
Confidence              1134788999999888863

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.62  E-value=6.1e-14  Score=126.04  Aligned_cols=188  Identities=19%  Similarity=0.191  Sum_probs=131.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCee
Q 021391           31 TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLN  110 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~id  110 (313)
                      ++|||||+|.||.+++++|+++|++|++++|.                       .+|+.+++++.++++..     .+|
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-----------------------~~d~~~~~~~~~~~~~~-----~~d   52 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS-----------------------QLDLTDPEALERLLRAI-----RPD   52 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-----------------------ccCCCCHHHHHHHHHhC-----CCC
Confidence            47999999999999999999999999999874                       47999999998888753     689


Q ss_pred             EEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCCC
Q 021391          111 ILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDES  190 (313)
Q Consensus       111 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~  190 (313)
                      ++||+++.....  ......+..+++|+.++.++++++...          +.++|++||.+.+.+..    ...+++..
T Consensus        53 ~vi~~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~v~~Ss~~vy~~~~----~~~~~E~~  116 (287)
T TIGR01214        53 AVVNTAAYTDVD--GAESDPEKAFAVNALAPQNLARAAARH----------GARLVHISTDYVFDGEG----KRPYREDD  116 (287)
T ss_pred             EEEECCcccccc--ccccCHHHHHHHHHHHHHHHHHHHHHc----------CCeEEEEeeeeeecCCC----CCCCCCCC
Confidence            999999865321  122345678899999999999987431          24899999865442211    11233333


Q ss_pred             CCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHH-----------hhcCCh
Q 021391          191 AYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGK-----------LVLKNI  259 (313)
Q Consensus       191 ~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~-----------~~~~~~  259 (313)
                      +.++...|+.+|.+.+.+++.+       +  .++..+.|+.+-.+.... .+...+......           ......
T Consensus       117 ~~~~~~~Y~~~K~~~E~~~~~~-------~--~~~~ilR~~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  186 (287)
T TIGR01214       117 ATNPLNVYGQSKLAGEQAIRAA-------G--PNALIVRTSWLYGGGGGR-NFVRTMLRLAGRGEELRVVDDQIGSPTYA  186 (287)
T ss_pred             CCCCcchhhHHHHHHHHHHHHh-------C--CCeEEEEeeecccCCCCC-CHHHHHHHHhhcCCCceEecCCCcCCcCH
Confidence            3445678999999999888765       3  456788898887665311 112112111111           112346


Q ss_pred             HHHHHHHHHHHcc
Q 021391          260 PQGAATTCYVALH  272 (313)
Q Consensus       260 ~eva~~~~~l~~~  272 (313)
                      +|++++++.++.+
T Consensus       187 ~Dva~a~~~~~~~  199 (287)
T TIGR01214       187 KDLARVIAALLQR  199 (287)
T ss_pred             HHHHHHHHHHHhh
Confidence            8999999999864

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.61  E-value=1.3e-13  Score=131.13  Aligned_cols=217  Identities=12%  Similarity=0.071  Sum_probs=138.1

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      ..+.-++|+||||||+|.||++++++|+++|++|++++|......+.   +.......++.++..|+.+..     +   
T Consensus       113 ~~~~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~---~~~~~~~~~~~~i~~D~~~~~-----l---  181 (442)
T PLN02206        113 LGLKRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKEN---VMHHFSNPNFELIRHDVVEPI-----L---  181 (442)
T ss_pred             cccccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhh---hhhhccCCceEEEECCccChh-----h---
Confidence            44555789999999999999999999999999999998754322211   111112346788889987652     1   


Q ss_pred             hhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC-C
Q 021391          103 NSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG-I  181 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~-~  181 (313)
                          .++|+|||+|+......  ..+.....+++|+.++.++++++...          +.++|++||...+...... .
T Consensus       182 ----~~~D~ViHlAa~~~~~~--~~~~p~~~~~~Nv~gt~nLleaa~~~----------g~r~V~~SS~~VYg~~~~~p~  245 (442)
T PLN02206        182 ----LEVDQIYHLACPASPVH--YKFNPVKTIKTNVVGTLNMLGLAKRV----------GARFLLTSTSEVYGDPLQHPQ  245 (442)
T ss_pred             ----cCCCEEEEeeeecchhh--hhcCHHHHHHHHHHHHHHHHHHHHHh----------CCEEEEECChHHhCCCCCCCC
Confidence                15899999998654321  12234678999999999999988532          2489999997654321110 0


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcc--ccchhHhHHHHHH-------
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR--YNGILRGFCNTVG-------  252 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~--~~~~~~~~~~~~~-------  252 (313)
                      +.+......+..+...|+.+|.+.+.+++.+...+   +  +++..+.|+.+-.+...  .......+.....       
T Consensus       246 ~E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~~---g--~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i  320 (442)
T PLN02206        246 VETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---N--VEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTV  320 (442)
T ss_pred             CccccccCCCCCccchHHHHHHHHHHHHHHHHHHh---C--CCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEE
Confidence            00000112233445689999999999888775543   4  66777777766554321  1111111111110       


Q ss_pred             ------HhhcCChHHHHHHHHHHHc
Q 021391          253 ------KLVLKNIPQGAATTCYVAL  271 (313)
Q Consensus       253 ------~~~~~~~~eva~~~~~l~~  271 (313)
                            ..-+...+|+|++++.++.
T Consensus       321 ~g~G~~~rdfi~V~Dva~ai~~a~e  345 (442)
T PLN02206        321 YGDGKQTRSFQFVSDLVEGLMRLME  345 (442)
T ss_pred             eCCCCEEEeEEeHHHHHHHHHHHHh
Confidence                  0114568999999998886

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.60  E-value=3.4e-14  Score=132.56  Aligned_cols=214  Identities=16%  Similarity=0.111  Sum_probs=140.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      ++|+||||||+|.||+++++.|.++|++|++++|......   .   ..  .....++.+|+++.+.+..+++       
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~---~---~~--~~~~~~~~~Dl~d~~~~~~~~~-------   84 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM---S---ED--MFCHEFHLVDLRVMENCLKVTK-------   84 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc---c---cc--cccceEEECCCCCHHHHHHHHh-------
Confidence            7799999999999999999999999999999998643211   0   00  1135678899999887766654       


Q ss_pred             CeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC-CCC
Q 021391          108 PLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF-DKI  186 (313)
Q Consensus       108 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~-~~~  186 (313)
                      ++|+|||+|+...... .........+..|+.++.++++++...-         -.++|++||...+.... .... ..+
T Consensus        85 ~~D~Vih~Aa~~~~~~-~~~~~~~~~~~~N~~~t~nll~aa~~~~---------vk~~V~~SS~~vYg~~~-~~~~~~~~  153 (370)
T PLN02695         85 GVDHVFNLAADMGGMG-FIQSNHSVIMYNNTMISFNMLEAARING---------VKRFFYASSACIYPEFK-QLETNVSL  153 (370)
T ss_pred             CCCEEEEcccccCCcc-ccccCchhhHHHHHHHHHHHHHHHHHhC---------CCEEEEeCchhhcCCcc-ccCcCCCc
Confidence            5899999998643211 1112334567789999999999875321         24899999975432211 1000 012


Q ss_pred             CCCC--CCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--------chhHhHHH---HH--
Q 021391          187 NDES--AYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--------GILRGFCN---TV--  251 (313)
Q Consensus       187 ~~~~--~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--------~~~~~~~~---~~--  251 (313)
                      .+..  +..+...|+.+|.+.+.+++.++..+   |  +++..+.|+.+-.|.....        .+......   .+  
T Consensus       154 ~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~~---g--~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~  228 (370)
T PLN02695        154 KESDAWPAEPQDAYGLEKLATEELCKHYTKDF---G--IECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEM  228 (370)
T ss_pred             CcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---C--CCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEE
Confidence            1211  44566789999999999998876654   4  7888899988877642210        11111111   00  


Q ss_pred             -H----HhhcCChHHHHHHHHHHHcc
Q 021391          252 -G----KLVLKNIPQGAATTCYVALH  272 (313)
Q Consensus       252 -~----~~~~~~~~eva~~~~~l~~~  272 (313)
                       .    ...+...+|+++++++++.+
T Consensus       229 ~g~g~~~r~~i~v~D~a~ai~~~~~~  254 (370)
T PLN02695        229 WGDGKQTRSFTFIDECVEGVLRLTKS  254 (370)
T ss_pred             eCCCCeEEeEEeHHHHHHHHHHHHhc
Confidence             0    01135788999999988763

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.56  E-value=5.8e-13  Score=121.09  Aligned_cols=207  Identities=11%  Similarity=0.029  Sum_probs=131.8

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCee
Q 021391           32 AIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLN  110 (313)
Q Consensus        32 ~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~id  110 (313)
                      ||||||+|.||+++++.|.++|+ .|++++|..... . ..++       ....+..|+.+.+.++.+.++   .+.++|
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~-~~~~-------~~~~~~~d~~~~~~~~~~~~~---~~~~~D   68 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-K-FLNL-------ADLVIADYIDKEDFLDRLEKG---AFGKIE   68 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-h-hhhh-------hheeeeccCcchhHHHHHHhh---ccCCCC
Confidence            68999999999999999999998 688887754321 1 1111       113567788887776665543   345899


Q ss_pred             EEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCCC
Q 021391          111 ILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDES  190 (313)
Q Consensus       111 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~  190 (313)
                      +|||+|+....    ..++.+..+++|+.+..++++++...          +.++|++||...+.. +..    .+.++.
T Consensus        69 ~vvh~A~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~----------~~~~v~~SS~~vy~~-~~~----~~~e~~  129 (314)
T TIGR02197        69 AIFHQGACSDT----TETDGEYMMENNYQYSKRLLDWCAEK----------GIPFIYASSAATYGD-GEA----GFREGR  129 (314)
T ss_pred             EEEECccccCc----cccchHHHHHHHHHHHHHHHHHHHHh----------CCcEEEEccHHhcCC-CCC----Cccccc
Confidence            99999996422    23456778899999999999987542          347999999654422 211    111222


Q ss_pred             C-CCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccc----cchhHhHHHHHHH------------
Q 021391          191 A-YNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY----NGILRGFCNTVGK------------  253 (313)
Q Consensus       191 ~-~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~----~~~~~~~~~~~~~------------  253 (313)
                      . ..+...|+.+|.+.+.+++....+.. .+  +++..+.|+.+-.+....    ..+...+......            
T Consensus       130 ~~~~p~~~Y~~sK~~~e~~~~~~~~~~~-~~--~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (314)
T TIGR02197       130 ELERPLNVYGYSKFLFDQYVRRRVLPEA-LS--AQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEG  206 (314)
T ss_pred             CcCCCCCHHHHHHHHHHHHHHHHhHhhc-cC--CceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccc
Confidence            1 23556899999999998876433222 12  566777777765543211    0111111111100            


Q ss_pred             -------hhcCChHHHHHHHHHHHcc
Q 021391          254 -------LVLKNIPQGAATTCYVALH  272 (313)
Q Consensus       254 -------~~~~~~~eva~~~~~l~~~  272 (313)
                             ..+...+|++++++.++..
T Consensus       207 ~~~g~~~~~~i~v~D~a~~i~~~~~~  232 (314)
T TIGR02197       207 FKDGEQLRDFVYVKDVVDVNLWLLEN  232 (314)
T ss_pred             cCCCCceeeeEEHHHHHHHHHHHHhc
Confidence                   1245689999999999873

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.56  E-value=6.9e-14  Score=131.31  Aligned_cols=212  Identities=15%  Similarity=0.124  Sum_probs=139.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHH--HHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKD--VREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~--~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      .++++++||||+|+||++++++|+++|++|++++|+..+...  ..+++...  ..++.++.+|++|++++..+++.+  
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~--~~~v~~v~~Dl~d~~~l~~~~~~~--  133 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKE--LPGAEVVFGDVTDADSLRKVLFSE--  133 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhh--cCCceEEEeeCCCHHHHHHHHHHh--
Confidence            467899999999999999999999999999999998755321  11122222  236889999999999999888754  


Q ss_pred             cCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCC
Q 021391          105 QGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFD  184 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  184 (313)
                       .+++|+||||++....       .....+++|+.+..++++++.    +     .+-.++|++||.+...         
T Consensus       134 -~~~~D~Vi~~aa~~~~-------~~~~~~~vn~~~~~~ll~aa~----~-----~gv~r~V~iSS~~v~~---------  187 (390)
T PLN02657        134 -GDPVDVVVSCLASRTG-------GVKDSWKIDYQATKNSLDAGR----E-----VGAKHFVLLSAICVQK---------  187 (390)
T ss_pred             -CCCCcEEEECCccCCC-------CCccchhhHHHHHHHHHHHHH----H-----cCCCEEEEEeeccccC---------
Confidence             1269999999984321       112346788888888888764    2     1235899999976432         


Q ss_pred             CCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHh-----HHH--HHHHhhcC
Q 021391          185 KINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRG-----FCN--TVGKLVLK  257 (313)
Q Consensus       185 ~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~-----~~~--~~~~~~~~  257 (313)
                               +...|..+|...+...+.     ...+  +++..+.|+.+-.++.........     +..  ........
T Consensus       188 ---------p~~~~~~sK~~~E~~l~~-----~~~g--l~~tIlRp~~~~~~~~~~~~~~~~g~~~~~~GdG~~~~~~~I  251 (390)
T PLN02657        188 ---------PLLEFQRAKLKFEAELQA-----LDSD--FTYSIVRPTAFFKSLGGQVEIVKDGGPYVMFGDGKLCACKPI  251 (390)
T ss_pred             ---------cchHHHHHHHHHHHHHHh-----ccCC--CCEEEEccHHHhcccHHHHHhhccCCceEEecCCcccccCce
Confidence                     234578899888776543     2346  888999998765332110000000     000  00011135


Q ss_pred             ChHHHHHHHHHHHccCCccCCCceeecCCc
Q 021391          258 NIPQGAATTCYVALHPQVQGVSGEYFSDSN  287 (313)
Q Consensus       258 ~~~eva~~~~~l~~~~~~~~~tG~~~~~~~  287 (313)
                      ..+|+|..++.++.++.   ..|+.+...+
T Consensus       252 ~v~DlA~~i~~~~~~~~---~~~~~~~Igg  278 (390)
T PLN02657        252 SEADLASFIADCVLDES---KINKVLPIGG  278 (390)
T ss_pred             eHHHHHHHHHHHHhCcc---ccCCEEEcCC
Confidence            67899999998886332   2355666544

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.54  E-value=1.3e-13  Score=124.97  Aligned_cols=143  Identities=17%  Similarity=0.157  Sum_probs=105.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      +++|||||+|.||++++++|+++| +|+.++|...                   .+..|++|.+++.++++..     ++
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-------------------~~~~Dl~d~~~~~~~~~~~-----~~   55 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST-------------------DYCGDFSNPEGVAETVRKI-----RP   55 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-------------------cccCCCCCHHHHHHHHHhc-----CC
Confidence            479999999999999999999999 7888877521                   2457999999998888854     68


Q ss_pred             eEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCC
Q 021391          110 NILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDE  189 (313)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~  189 (313)
                      |+|||+|+.....  ...++.+..+.+|+.++.++++++...          +.++|++||...+.+.. .   ...++.
T Consensus        56 D~Vih~Aa~~~~~--~~~~~~~~~~~~N~~~~~~l~~aa~~~----------g~~~v~~Ss~~Vy~~~~-~---~p~~E~  119 (299)
T PRK09987         56 DVIVNAAAHTAVD--KAESEPEFAQLLNATSVEAIAKAANEV----------GAWVVHYSTDYVFPGTG-D---IPWQET  119 (299)
T ss_pred             CEEEECCccCCcc--hhhcCHHHHHHHHHHHHHHHHHHHHHc----------CCeEEEEccceEECCCC-C---CCcCCC
Confidence            9999999875432  223344666789999999999988642          34899998866543221 1   112233


Q ss_pred             CCCCccccchHhHHHHHHHHHHHH
Q 021391          190 SAYNSFGAYGQSKLANILHAKELA  213 (313)
Q Consensus       190 ~~~~~~~~Y~asK~a~~~l~~~la  213 (313)
                      .+..+...|+.+|.+.+.+++.+.
T Consensus       120 ~~~~P~~~Yg~sK~~~E~~~~~~~  143 (299)
T PRK09987        120 DATAPLNVYGETKLAGEKALQEHC  143 (299)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHhC
Confidence            345566789999999998876643

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.54  E-value=1.7e-13  Score=125.17  Aligned_cols=198  Identities=13%  Similarity=0.074  Sum_probs=129.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      ++++||||||.||++++++|+++|++|++++|+.++...    +.    ..++.++.+|++|++++..+++       ++
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~----l~----~~~v~~v~~Dl~d~~~l~~al~-------g~   65 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASF----LK----EWGAELVYGDLSLPETLPPSFK-------GV   65 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhh----Hh----hcCCEEEECCCCCHHHHHHHHC-------CC
Confidence            379999999999999999999999999999998654322    11    2258899999999998877765       68


Q ss_pred             eEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCC
Q 021391          110 NILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDE  189 (313)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~  189 (313)
                      |+|||+++...       .+.....++|+.+..++++++...-         -.++|++||..... .            
T Consensus        66 d~Vi~~~~~~~-------~~~~~~~~~~~~~~~~l~~aa~~~g---------vkr~I~~Ss~~~~~-~------------  116 (317)
T CHL00194         66 TAIIDASTSRP-------SDLYNAKQIDWDGKLALIEAAKAAK---------IKRFIFFSILNAEQ-Y------------  116 (317)
T ss_pred             CEEEECCCCCC-------CCccchhhhhHHHHHHHHHHHHHcC---------CCEEEEeccccccc-c------------
Confidence            99999876321       1234467788889888888775431         24899998854321 0            


Q ss_pred             CCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHH--------HHHhhcCChHH
Q 021391          190 SAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNT--------VGKLVLKNIPQ  261 (313)
Q Consensus       190 ~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~--------~~~~~~~~~~e  261 (313)
                          +...|..+|...+.+.+       ..|  +.+..+.|+.+-.++....  .......        .........+|
T Consensus       117 ----~~~~~~~~K~~~e~~l~-------~~~--l~~tilRp~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~v~D  181 (317)
T CHL00194        117 ----PYIPLMKLKSDIEQKLK-------KSG--IPYTIFRLAGFFQGLISQY--AIPILEKQPIWITNESTPISYIDTQD  181 (317)
T ss_pred             ----CCChHHHHHHHHHHHHH-------HcC--CCeEEEeecHHhhhhhhhh--hhhhccCCceEecCCCCccCccCHHH
Confidence                22457888888776543       245  7777888875432211100  0000000        00011245699


Q ss_pred             HHHHHHHHHccCCccCCCceeecCCccc
Q 021391          262 GAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       262 va~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      +|++++.++.++.   ..|+.++..+..
T Consensus       182 va~~~~~~l~~~~---~~~~~~ni~g~~  206 (317)
T CHL00194        182 AAKFCLKSLSLPE---TKNKTFPLVGPK  206 (317)
T ss_pred             HHHHHHHHhcCcc---ccCcEEEecCCC
Confidence            9999998886432   235666655443

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.51  E-value=2.9e-13  Score=119.61  Aligned_cols=169  Identities=20%  Similarity=0.195  Sum_probs=126.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhC-CCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEI-PSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      +++||||||.|-||.+++.+|.++|+.|++++.=........+.++... .+..+.++..|+.|.+.++++++..     
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-----   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence            6899999999999999999999999999999863333333334444332 2468999999999999999999976     


Q ss_pred             CeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCC
Q 021391          108 PLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIN  187 (313)
Q Consensus       108 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  187 (313)
                      ++|.|+|-|+....+  .+.+...+.+..|+.|.++++..+..+-         -..+|+.||. ..++.|...++.+  
T Consensus        77 ~fd~V~Hfa~~~~vg--eS~~~p~~Y~~nNi~gtlnlLe~~~~~~---------~~~~V~sssa-tvYG~p~~ip~te--  142 (343)
T KOG1371|consen   77 KFDAVMHFAALAAVG--ESMENPLSYYHNNIAGTLNLLEVMKAHN---------VKALVFSSSA-TVYGLPTKVPITE--  142 (343)
T ss_pred             CCceEEeehhhhccc--hhhhCchhheehhhhhHHHHHHHHHHcC---------CceEEEecce-eeecCcceeeccC--
Confidence            699999999865432  3444558889999999999999887664         2367777764 4445543333322  


Q ss_pred             CCCCC-CccccchHhHHHHHHHHHHHHHHhc
Q 021391          188 DESAY-NSFGAYGQSKLANILHAKELAKHLK  217 (313)
Q Consensus       188 ~~~~~-~~~~~Y~asK~a~~~l~~~la~e~~  217 (313)
                       +.+- .+...|+.+|.+++...+.+...+.
T Consensus       143 -~~~t~~p~~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  143 -EDPTDQPTNPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             -cCCCCCCCCcchhhhHHHHHHHHhhhcccc
Confidence             2222 3667899999999999998877655

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.50  E-value=1.4e-12  Score=123.98  Aligned_cols=214  Identities=13%  Similarity=0.067  Sum_probs=136.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      +.-+.++||||||+|.||++++++|+++|++|++++|...........+.   ...++.++..|+.+..     +     
T Consensus       116 ~~~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~---~~~~~~~~~~Di~~~~-----~-----  182 (436)
T PLN02166        116 IGRKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLF---GNPRFELIRHDVVEPI-----L-----  182 (436)
T ss_pred             cccCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhc---cCCceEEEECcccccc-----c-----
Confidence            33456889999999999999999999999999999986432221111111   1236778888987642     1     


Q ss_pred             cCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCC
Q 021391          105 QGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFD  184 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  184 (313)
                        .++|+|||+|+......  ...+....+++|+.+..++++++...          +.++|++||.+.+. .+.....+
T Consensus       183 --~~~D~ViHlAa~~~~~~--~~~~p~~~~~~Nv~gT~nLleaa~~~----------g~r~V~~SS~~VYg-~~~~~p~~  247 (436)
T PLN02166        183 --LEVDQIYHLACPASPVH--YKYNPVKTIKTNVMGTLNMLGLAKRV----------GARFLLTSTSEVYG-DPLEHPQK  247 (436)
T ss_pred             --cCCCEEEECceeccchh--hccCHHHHHHHHHHHHHHHHHHHHHh----------CCEEEEECcHHHhC-CCCCCCCC
Confidence              26899999998653322  11234678999999999999888643          23899998876543 22111111


Q ss_pred             C--CCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcc--ccchhHhHHHHH----H----
Q 021391          185 K--INDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR--YNGILRGFCNTV----G----  252 (313)
Q Consensus       185 ~--~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~--~~~~~~~~~~~~----~----  252 (313)
                      +  .....+..+...|+.+|.+.+.+++.++...   +  +++..+.|+.+-.+...  .......+....    +    
T Consensus       248 E~~~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~~---~--l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~  322 (436)
T PLN02166        248 ETYWGNVNPIGERSCYDEGKRTAETLAMDYHRGA---G--VEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVY  322 (436)
T ss_pred             ccccccCCCCCCCCchHHHHHHHHHHHHHHHHHh---C--CCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEe
Confidence            1  1111344455689999999999998876653   4  66667777766555321  111111111111    0    


Q ss_pred             -----HhhcCChHHHHHHHHHHHc
Q 021391          253 -----KLVLKNIPQGAATTCYVAL  271 (313)
Q Consensus       253 -----~~~~~~~~eva~~~~~l~~  271 (313)
                           ..-+...+|+++++..++.
T Consensus       323 g~g~~~rdfi~V~Dva~ai~~~~~  346 (436)
T PLN02166        323 GDGKQTRSFQYVSDLVDGLVALME  346 (436)
T ss_pred             CCCCeEEeeEEHHHHHHHHHHHHh
Confidence                 1124568899999988875

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.47  E-value=2.2e-12  Score=129.10  Aligned_cols=177  Identities=21%  Similarity=0.171  Sum_probs=116.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHH--HcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHH--HHHHHHHHhhc
Q 021391           30 LTAIVTGASSGIGTETARVLA--LRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLAS--VRKFASEYNSQ  105 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La--~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~--v~~~~~~~~~~  105 (313)
                      +++|||||||.||++++++|+  .+|++|++++|+... .. ...+.......++.++.+|++|++.  .....+++   
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~-~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l---   75 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SR-LEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL---   75 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HH-HHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh---
Confidence            379999999999999999999  589999999996432 11 2222222222478999999999531  01112222   


Q ss_pred             CCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCC
Q 021391          106 GRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDK  185 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  185 (313)
                       .++|+|||+|+.....     .......++|+.+..++++.+...         ...++|++||...........+.++
T Consensus        76 -~~~D~Vih~Aa~~~~~-----~~~~~~~~~nv~gt~~ll~~a~~~---------~~~~~v~~SS~~v~g~~~~~~~e~~  140 (657)
T PRK07201         76 -GDIDHVVHLAAIYDLT-----ADEEAQRAANVDGTRNVVELAERL---------QAATFHHVSSIAVAGDYEGVFREDD  140 (657)
T ss_pred             -cCCCEEEECceeecCC-----CCHHHHHHHHhHHHHHHHHHHHhc---------CCCeEEEEeccccccCccCcccccc
Confidence             3799999999965321     234567789999999888876432         1358999998765432221111111


Q ss_pred             CCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccC
Q 021391          186 INDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTN  236 (313)
Q Consensus       186 ~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~  236 (313)
                      .+  ...+....|+.+|...+.+++.      ..|  +++..+.|+.+-.+
T Consensus       141 ~~--~~~~~~~~Y~~sK~~~E~~~~~------~~g--~~~~ilRp~~v~G~  181 (657)
T PRK07201        141 FD--EGQGLPTPYHRTKFEAEKLVRE------ECG--LPWRVYRPAVVVGD  181 (657)
T ss_pred             ch--hhcCCCCchHHHHHHHHHHHHH------cCC--CcEEEEcCCeeeec
Confidence            11  1122335799999999987753      245  88889999988654

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.46  E-value=2.8e-12  Score=107.57  Aligned_cols=182  Identities=20%  Similarity=0.184  Sum_probs=123.4

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCeeE
Q 021391           32 AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNI  111 (313)
Q Consensus        32 ~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~id~  111 (313)
                      |+|+||||.+|+.++++|+++|++|+++.|+.++.++          ..+++.+.+|+.|++++.++++       +.|+
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~----------~~~~~~~~~d~~d~~~~~~al~-------~~d~   63 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED----------SPGVEIIQGDLFDPDSVKAALK-------GADA   63 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH----------CTTEEEEESCTTCHHHHHHHHT-------TSSE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc----------ccccccceeeehhhhhhhhhhh-------hcch
Confidence            7899999999999999999999999999999887665          3479999999999988887777       7899


Q ss_pred             EEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCCCC
Q 021391          112 LINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESA  191 (313)
Q Consensus       112 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~  191 (313)
                      +|+++|....       +            ...++.+...+++.     +-.++|++||.......+..      .....
T Consensus        64 vi~~~~~~~~-------~------------~~~~~~~~~a~~~~-----~~~~~v~~s~~~~~~~~~~~------~~~~~  113 (183)
T PF13460_consen   64 VIHAAGPPPK-------D------------VDAAKNIIEAAKKA-----GVKRVVYLSSAGVYRDPPGL------FSDED  113 (183)
T ss_dssp             EEECCHSTTT-------H------------HHHHHHHHHHHHHT-----TSSEEEEEEETTGTTTCTSE------EEGGT
T ss_pred             hhhhhhhhcc-------c------------cccccccccccccc-----ccccceeeeccccCCCCCcc------ccccc
Confidence            9999975322       0            44455566666552     24589998887654432210      00000


Q ss_pred             CCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHHHHHHHHHHc
Q 021391          192 YNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGAATTCYVAL  271 (313)
Q Consensus       192 ~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~eva~~~~~l~~  271 (313)
                      .+....|...|...+.+.       ...+  ++...+.|+.+-.+......+...  .........+.+|+|..++.++.
T Consensus       114 ~~~~~~~~~~~~~~e~~~-------~~~~--~~~~ivrp~~~~~~~~~~~~~~~~--~~~~~~~~i~~~DvA~~~~~~l~  182 (183)
T PF13460_consen  114 KPIFPEYARDKREAEEAL-------RESG--LNWTIVRPGWIYGNPSRSYRLIKE--GGPQGVNFISREDVAKAIVEALE  182 (183)
T ss_dssp             CGGGHHHHHHHHHHHHHH-------HHST--SEEEEEEESEEEBTTSSSEEEESS--TSTTSHCEEEHHHHHHHHHHHHH
T ss_pred             ccchhhhHHHHHHHHHHH-------HhcC--CCEEEEECcEeEeCCCcceeEEec--cCCCCcCcCCHHHHHHHHHHHhC
Confidence            111234566665544333       2346  899999999987665332222111  11112245788999999998875

...

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.46  E-value=3.6e-13  Score=118.92  Aligned_cols=175  Identities=19%  Similarity=0.195  Sum_probs=101.9

Q ss_pred             EeCCCCchHHHHHHHHHHcCC--EEEEEecCchh--H-HHHHHHHHHhC--------CCCceEEEEccCCCHH------H
Q 021391           34 VTGASSGIGTETARVLALRGV--HVIMAVRNMAA--G-KDVREAIVKEI--------PSAKVDAMELDVSSLA------S   94 (313)
Q Consensus        34 ItGas~giG~aia~~La~~G~--~V~l~~r~~~~--~-~~~~~~l~~~~--------~~~~~~~~~~D~s~~~------~   94 (313)
                      ||||||.||.++..+|++++.  +|+++.|....  + +...+.+....        ...+++++..|++++.      .
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999987  99999997633  2 22222221100        1468999999999964      3


Q ss_pred             HHHHHHHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccc
Q 021391           95 VRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHR  174 (313)
Q Consensus        95 v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~  174 (313)
                      ...+.+       .+|++||||+.....     ..++...++|+.|+.++++.+...         +..+++++|| +..
T Consensus        81 ~~~L~~-------~v~~IiH~Aa~v~~~-----~~~~~~~~~NV~gt~~ll~la~~~---------~~~~~~~iST-a~v  138 (249)
T PF07993_consen   81 YQELAE-------EVDVIIHCAASVNFN-----APYSELRAVNVDGTRNLLRLAAQG---------KRKRFHYIST-AYV  138 (249)
T ss_dssp             HHHHHH-------H--EEEE--SS-SBS------S--EEHHHHHHHHHHHHHHHTSS---------S---EEEEEE-GGG
T ss_pred             hhcccc-------ccceeeecchhhhhc-----ccchhhhhhHHHHHHHHHHHHHhc---------cCcceEEecc-ccc
Confidence            444434       589999999865321     255667889999999999888621         1238999999 333


Q ss_pred             ccccCCCC------CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCccccc
Q 021391          175 FAYSEGIR------FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVT  235 (313)
Q Consensus       175 ~~~~~~~~------~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t  235 (313)
                      .+......      ..+.+..........|..||...|.+++..+.+.   |  +.+..+.||.+-.
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~---g--~p~~I~Rp~~i~g  200 (249)
T PF07993_consen  139 AGSRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRH---G--LPVTIYRPGIIVG  200 (249)
T ss_dssp             TTS-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH--------EEEEEE-EEE-
T ss_pred             cCCCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcC---C--ceEEEEecCcccc
Confidence            32221111      1112222333345689999999999998887653   4  7888999998854

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.45  E-value=8.1e-13  Score=119.67  Aligned_cols=194  Identities=13%  Similarity=0.097  Sum_probs=129.3

Q ss_pred             EEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCeeEE
Q 021391           33 IVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNIL  112 (313)
Q Consensus        33 lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~id~l  112 (313)
                      |||||+|.||.++++.|++.|++|+++.+.                      ..+|+++.++++.+++..     ++|+|
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~----------------------~~~Dl~~~~~l~~~~~~~-----~~d~V   53 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH----------------------KELDLTRQADVEAFFAKE-----KPTYV   53 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc----------------------ccCCCCCHHHHHHHHhcc-----CCCEE
Confidence            699999999999999999999988766422                      148999999988887753     68999


Q ss_pred             EEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCCC--
Q 021391          113 INNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDES--  190 (313)
Q Consensus       113 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~--  190 (313)
                      ||+|+...... ...+.....++.|+.++.++++++...-         -.++|++||...+.+.. .   ..+++..  
T Consensus        54 ih~A~~~~~~~-~~~~~~~~~~~~n~~~~~~ll~~~~~~~---------~~~~i~~SS~~vyg~~~-~---~~~~E~~~~  119 (306)
T PLN02725         54 ILAAAKVGGIH-ANMTYPADFIRENLQIQTNVIDAAYRHG---------VKKLLFLGSSCIYPKFA-P---QPIPETALL  119 (306)
T ss_pred             EEeeeeecccc-hhhhCcHHHHHHHhHHHHHHHHHHHHcC---------CCeEEEeCceeecCCCC-C---CCCCHHHhc
Confidence            99998743211 1122345678899999999999886431         34899999975432211 1   1122211  


Q ss_pred             --CCCc-cccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccc----cchhHhHHHH-------------
Q 021391          191 --AYNS-FGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY----NGILRGFCNT-------------  250 (313)
Q Consensus       191 --~~~~-~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~----~~~~~~~~~~-------------  250 (313)
                        +..+ ...|+.+|.+.+.+++.+..+.   +  +++..+.|+.+-.+....    ......+...             
T Consensus       120 ~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (306)
T PLN02725        120 TGPPEPTNEWYAIAKIAGIKMCQAYRIQY---G--WDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVV  194 (306)
T ss_pred             cCCCCCCcchHHHHHHHHHHHHHHHHHHh---C--CCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEE
Confidence              2222 2359999999998888876554   4  788899999887664221    0111111100             


Q ss_pred             -----HHHhhcCChHHHHHHHHHHHcc
Q 021391          251 -----VGKLVLKNIPQGAATTCYVALH  272 (313)
Q Consensus       251 -----~~~~~~~~~~eva~~~~~l~~~  272 (313)
                           ........++|++++++.++..
T Consensus       195 ~~~~g~~~~~~i~v~Dv~~~~~~~~~~  221 (306)
T PLN02725        195 VWGSGSPLREFLHVDDLADAVVFLMRR  221 (306)
T ss_pred             EcCCCCeeeccccHHHHHHHHHHHHhc
Confidence                 0011346788999999999873

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.45  E-value=1.2e-12  Score=117.80  Aligned_cols=189  Identities=21%  Similarity=0.227  Sum_probs=123.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      +++|||||+|-||.++.+.|.++|+.|+.++|+                       .+|++|.+++.+++++.     ++
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-----------------------~~dl~d~~~~~~~~~~~-----~p   52 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS-----------------------DLDLTDPEAVAKLLEAF-----KP   52 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-----------------------CS-TTSHHHHHHHHHHH-------
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-----------------------hcCCCCHHHHHHHHHHh-----CC
Confidence            479999999999999999999999999999766                       78999999999999987     79


Q ss_pred             eEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCC
Q 021391          110 NILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDE  189 (313)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~  189 (313)
                      |+|||||++...  +.-.+.-+..+.+|+.++.++++.+...          +.++|++||.....+....    ...++
T Consensus        53 d~Vin~aa~~~~--~~ce~~p~~a~~iN~~~~~~la~~~~~~----------~~~li~~STd~VFdG~~~~----~y~E~  116 (286)
T PF04321_consen   53 DVVINCAAYTNV--DACEKNPEEAYAINVDATKNLAEACKER----------GARLIHISTDYVFDGDKGG----PYTED  116 (286)
T ss_dssp             SEEEE------H--HHHHHSHHHHHHHHTHHHHHHHHHHHHC----------T-EEEEEEEGGGS-SSTSS----SB-TT
T ss_pred             CeEeccceeecH--HhhhhChhhhHHHhhHHHHHHHHHHHHc----------CCcEEEeeccEEEcCCccc----ccccC
Confidence            999999987522  2233456778999999999999988643          5799999998765443111    12233


Q ss_pred             CCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHh-----------hcCC
Q 021391          190 SAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKL-----------VLKN  258 (313)
Q Consensus       190 ~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~-----------~~~~  258 (313)
                      ...++...|+.+|...|..++...    +     +...+.++++-.+  ....+...+.......           ....
T Consensus       117 d~~~P~~~YG~~K~~~E~~v~~~~----~-----~~~IlR~~~~~g~--~~~~~~~~~~~~~~~~~~i~~~~d~~~~p~~  185 (286)
T PF04321_consen  117 DPPNPLNVYGRSKLEGEQAVRAAC----P-----NALILRTSWVYGP--SGRNFLRWLLRRLRQGEPIKLFDDQYRSPTY  185 (286)
T ss_dssp             S----SSHHHHHHHHHHHHHHHH-----S-----SEEEEEE-SEESS--SSSSHHHHHHHHHHCTSEEEEESSCEE--EE
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHhc----C-----CEEEEecceeccc--CCCchhhhHHHHHhcCCeeEeeCCceeCCEE
Confidence            344567889999999888777622    2     2334566666554  2223344433333211           2345


Q ss_pred             hHHHHHHHHHHHccC
Q 021391          259 IPQGAATTCYVALHP  273 (313)
Q Consensus       259 ~~eva~~~~~l~~~~  273 (313)
                      .+++|+.+..++...
T Consensus       186 ~~dlA~~i~~l~~~~  200 (286)
T PF04321_consen  186 VDDLARVILELIEKN  200 (286)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhc
Confidence            788999999998743

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PLN02778 3,5-epimerase/4-reductase

Probab=99.40  E-value=1e-11  Score=112.52  Aligned_cols=144  Identities=13%  Similarity=0.062  Sum_probs=94.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      .+++|||||+|.||+++++.|+++|++|++..                          .|+.+.+.+...+++.     +
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~--------------------------~~~~~~~~v~~~l~~~-----~   57 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS--------------------------GRLENRASLEADIDAV-----K   57 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec--------------------------CccCCHHHHHHHHHhc-----C
Confidence            47899999999999999999999999987432                          2344555555555432     6


Q ss_pred             eeEEEEcccCCCCCC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC--CCCC
Q 021391          109 LNILINNAGIMASPF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI--RFDK  185 (313)
Q Consensus       109 id~lv~~ag~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~--~~~~  185 (313)
                      +|+|||+||....+. +...+.....+++|+.++.++++++...          +.+.+++||.+.........  +...
T Consensus        58 ~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~----------gv~~v~~sS~~vy~~~~~~p~~~~~~  127 (298)
T PLN02778         58 PTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRER----------GLVLTNYATGCIFEYDDAHPLGSGIG  127 (298)
T ss_pred             CCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh----------CCCEEEEecceEeCCCCCCCcccCCC
Confidence            899999999764332 2233455678999999999999998643          22455565543221110000  0001


Q ss_pred             CCCC-CCCCccccchHhHHHHHHHHHHHH
Q 021391          186 INDE-SAYNSFGAYGQSKLANILHAKELA  213 (313)
Q Consensus       186 ~~~~-~~~~~~~~Y~asK~a~~~l~~~la  213 (313)
                      +.++ .+.++...|+.||.+.+.+++.++
T Consensus       128 ~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~  156 (298)
T PLN02778        128 FKEEDTPNFTGSFYSKTKAMVEELLKNYE  156 (298)
T ss_pred             CCcCCCCCCCCCchHHHHHHHHHHHHHhh
Confidence            2222 222234679999999999988765

>PLN02996 fatty acyl-CoA reductase

Probab=99.40  E-value=8.9e-12  Score=120.23  Aligned_cols=185  Identities=16%  Similarity=0.163  Sum_probs=121.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC---EEEEEecCchh--HH-HHHHHH---------HHhCC-------CCceEE
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV---HVIMAVRNMAA--GK-DVREAI---------VKEIP-------SAKVDA   84 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~---~V~l~~r~~~~--~~-~~~~~l---------~~~~~-------~~~~~~   84 (313)
                      ++||+++||||||.||+.++..|++.+.   +|+++.|....  .. ....++         .+..+       ..++.+
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            7899999999999999999999998643   68888886531  11 111111         11111       147899


Q ss_pred             EEccCCCH-------HHHHHHHHHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhc
Q 021391           85 MELDVSSL-------ASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQ  157 (313)
Q Consensus        85 ~~~D~s~~-------~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~  157 (313)
                      +..|++++       +.++.+++       .+|+|||+|+....     .+..+..+++|+.|+.++++.+...-     
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~-----~~~~~~~~~~Nv~gt~~ll~~a~~~~-----  151 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNF-----DERYDVALGINTLGALNVLNFAKKCV-----  151 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCC-----cCCHHHHHHHHHHHHHHHHHHHHhcC-----
Confidence            99999843       33444443       58999999987532     23567889999999999999885431     


Q ss_pred             cCCCCCeEEEECCccccccccCCC---CC---C--------CCC-------------------C-------------CC-
Q 021391          158 KSSREGRIVNVSSEAHRFAYSEGI---RF---D--------KIN-------------------D-------------ES-  190 (313)
Q Consensus       158 ~~~~~g~iv~isS~~~~~~~~~~~---~~---~--------~~~-------------------~-------------~~-  190 (313)
                         .-.++|++||........+..   ..   .        +.+                   +             +. 
T Consensus       152 ---~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (491)
T PLN02996        152 ---KVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAK  228 (491)
T ss_pred             ---CCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHH
Confidence               123789988876543211100   00   0        010                   0             00 


Q ss_pred             CCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCc
Q 021391          191 AYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLF  238 (313)
Q Consensus       191 ~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~  238 (313)
                      .......|+.||++.|.+++..+     .|  +.+..+.|+.|-.+..
T Consensus       229 ~~~~pn~Y~~TK~~aE~lv~~~~-----~~--lpv~i~RP~~V~G~~~  269 (491)
T PLN02996        229 LHGWPNTYVFTKAMGEMLLGNFK-----EN--LPLVIIRPTMITSTYK  269 (491)
T ss_pred             hCCCCCchHhhHHHHHHHHHHhc-----CC--CCEEEECCCEeccCCc
Confidence            11123469999999999886542     25  8889999998866543

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.34  E-value=1.2e-10  Score=97.17  Aligned_cols=173  Identities=13%  Similarity=0.129  Sum_probs=121.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      ++++||||+ |+|.++++.|+++|++|++++|+.+..+.....+..   ..++.++.+|++|++++.++++.+.++++++
T Consensus         1 m~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~---~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~i   76 (177)
T PRK08309          1 MHALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT---PESITPLPLDYHDDDALKLAIKSTIEKNGPF   76 (177)
T ss_pred             CEEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc---CCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            479999998 777889999999999999999998776665544422   3468889999999999999999999989999


Q ss_pred             eEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEEC-CccccccccCCCCCCCCCC
Q 021391          110 NILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVS-SEAHRFAYSEGIRFDKIND  188 (313)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~is-S~~~~~~~~~~~~~~~~~~  188 (313)
                      |++|+..-..                    ++-.+.+++...-.+     ++.-+++.|- |.++.              
T Consensus        77 d~lv~~vh~~--------------------~~~~~~~~~~~~gv~-----~~~~~~~h~~gs~~~~--------------  117 (177)
T PRK08309         77 DLAVAWIHSS--------------------AKDALSVVCRELDGS-----SETYRLFHVLGSAASD--------------  117 (177)
T ss_pred             eEEEEecccc--------------------chhhHHHHHHHHccC-----CCCceEEEEeCCcCCc--------------
Confidence            9999877432                    344445555444333     2234677764 32210              


Q ss_pred             CCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHHHHHHHH
Q 021391          189 ESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGAATTCY  268 (313)
Q Consensus       189 ~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~eva~~~~~  268 (313)
                              .            +.....+....  ....-|..|++..+-..               |..+-+|+++.++.
T Consensus       118 --------~------------~~~~~~~~~~~--~~~~~i~lgf~~~~~~~---------------rwlt~~ei~~gv~~  160 (177)
T PRK08309        118 --------P------------RIPSEKIGPAR--CSYRRVILGFVLEDTYS---------------RWLTHEEISDGVIK  160 (177)
T ss_pred             --------h------------hhhhhhhhhcC--CceEEEEEeEEEeCCcc---------------ccCchHHHHHHHHH
Confidence                    0            11122222233  45566778998655322               34578999999999


Q ss_pred             HHccCCccCCCcee
Q 021391          269 VALHPQVQGVSGEY  282 (313)
Q Consensus       269 l~~~~~~~~~tG~~  282 (313)
                      .+.++...++.|+.
T Consensus       161 ~~~~~~~~~~~g~~  174 (177)
T PRK08309        161 AIESDADEHVVGTV  174 (177)
T ss_pred             HHhcCCCeEEEEEe
Confidence            99988877777764

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.33  E-value=3.5e-11  Score=106.20  Aligned_cols=184  Identities=21%  Similarity=0.218  Sum_probs=130.0

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCeeE
Q 021391           32 AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNI  111 (313)
Q Consensus        32 ~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~id~  111 (313)
                      +||||++|=+|.++++.|. .+..|+.++|..                       +|++|++++.+++++.     ++|+
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-----------------------~Ditd~~~v~~~i~~~-----~PDv   53 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE-----------------------LDITDPDAVLEVIRET-----RPDV   53 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc-----------------------ccccChHHHHHHHHhh-----CCCE
Confidence            9999999999999999999 668999887652                       9999999999999987     8999


Q ss_pred             EEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCCCC
Q 021391          112 LINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESA  191 (313)
Q Consensus       112 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~  191 (313)
                      |||+|++...  +..+.+.+..+.+|..++.++++++...          +..+|++|+-...-|...+ ...   +...
T Consensus        54 VIn~AAyt~v--D~aE~~~e~A~~vNa~~~~~lA~aa~~~----------ga~lVhiSTDyVFDG~~~~-~Y~---E~D~  117 (281)
T COG1091          54 VINAAAYTAV--DKAESEPELAFAVNATGAENLARAAAEV----------GARLVHISTDYVFDGEKGG-PYK---ETDT  117 (281)
T ss_pred             EEECcccccc--ccccCCHHHHHHhHHHHHHHHHHHHHHh----------CCeEEEeecceEecCCCCC-CCC---CCCC
Confidence            9999997643  3345557888999999999999999655          6789999987665443311 111   2223


Q ss_pred             CCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHH-----------hhcCChH
Q 021391          192 YNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGK-----------LVLKNIP  260 (313)
Q Consensus       192 ~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~-----------~~~~~~~  260 (313)
                      .++...|+.||.+.|..++...    ++.     ..|...++-....+  .|...+.+....           .......
T Consensus       118 ~~P~nvYG~sKl~GE~~v~~~~----~~~-----~I~Rtswv~g~~g~--nFv~tml~la~~~~~l~vv~Dq~gsPt~~~  186 (281)
T COG1091         118 PNPLNVYGRSKLAGEEAVRAAG----PRH-----LILRTSWVYGEYGN--NFVKTMLRLAKEGKELKVVDDQYGSPTYTE  186 (281)
T ss_pred             CCChhhhhHHHHHHHHHHHHhC----CCE-----EEEEeeeeecCCCC--CHHHHHHHHhhcCCceEEECCeeeCCccHH
Confidence            3356789999999888777754    332     12333333332222  122222222111           1245678


Q ss_pred             HHHHHHHHHHc
Q 021391          261 QGAATTCYVAL  271 (313)
Q Consensus       261 eva~~~~~l~~  271 (313)
                      ++|+.+..++.
T Consensus       187 dlA~~i~~ll~  197 (281)
T COG1091         187 DLADAILELLE  197 (281)
T ss_pred             HHHHHHHHHHh
Confidence            89999999886

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.30  E-value=3.7e-11  Score=109.67  Aligned_cols=183  Identities=17%  Similarity=0.159  Sum_probs=128.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcC--CEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRG--VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      ++.++|||||+|.+|++++++|.+++  ..|.+++..+..-....++...  ....+.++.+|+.+..++...+.     
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~--~~~~v~~~~~D~~~~~~i~~a~~-----   75 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGF--RSGRVTVILGDLLDANSISNAFQ-----   75 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcc--cCCceeEEecchhhhhhhhhhcc-----
Confidence            67899999999999999999999999  6899999876421111111111  14578999999999988877766     


Q ss_pred             CCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCC
Q 021391          106 GRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDK  185 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  185 (313)
                        +. .+||+|....+..  ...+-+..+++|+.|+.+++.++...-.+         ++|++||.....+..   +.-.
T Consensus        76 --~~-~Vvh~aa~~~~~~--~~~~~~~~~~vNV~gT~nvi~~c~~~~v~---------~lIYtSs~~Vvf~g~---~~~n  138 (361)
T KOG1430|consen   76 --GA-VVVHCAASPVPDF--VENDRDLAMRVNVNGTLNVIEACKELGVK---------RLIYTSSAYVVFGGE---PIIN  138 (361)
T ss_pred             --Cc-eEEEeccccCccc--cccchhhheeecchhHHHHHHHHHHhCCC---------EEEEecCceEEeCCe---eccc
Confidence              55 7777776443322  22367788999999999999988766544         899999987655432   1122


Q ss_pred             CCCCCCCC--ccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcc
Q 021391          186 INDESAYN--SFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR  239 (313)
Q Consensus       186 ~~~~~~~~--~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~  239 (313)
                      -++..+++  ....|+.||+-.|.+++....   ..+  ....++.|-.|-.|..+
T Consensus       139 ~~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~---~~~--l~T~aLR~~~IYGpgd~  189 (361)
T KOG1430|consen  139 GDESLPYPLKHIDPYGESKALAEKLVLEANG---SDD--LYTCALRPPGIYGPGDK  189 (361)
T ss_pred             CCCCCCCccccccccchHHHHHHHHHHHhcC---CCC--eeEEEEccccccCCCCc
Confidence            22333333  335899999988887776554   334  78888999888766544

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.29  E-value=1.1e-10  Score=104.91  Aligned_cols=204  Identities=12%  Similarity=0.034  Sum_probs=113.5

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCeeE
Q 021391           32 AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNI  111 (313)
Q Consensus        32 ~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~id~  111 (313)
                      +|||||+|.||.++++.|+++|++|++++|+.+......        .  ..  ..|+.. ...       .....++|+
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~--~~--~~~~~~-~~~-------~~~~~~~D~   60 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK--------W--EG--YKPWAP-LAE-------SEALEGADA   60 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc--------c--ee--eecccc-cch-------hhhcCCCCE
Confidence            689999999999999999999999999999876532210        0  00  112222 111       122347999


Q ss_pred             EEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCCCC
Q 021391          112 LINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESA  191 (313)
Q Consensus       112 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~  191 (313)
                      |||++|..........+..+..+++|+.++.++++++...        +.+..+++.+|..+..+.....   .+++...
T Consensus        61 Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--------~~~~~~~i~~S~~~~yg~~~~~---~~~E~~~  129 (292)
T TIGR01777        61 VINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAA--------EQKPKVFISASAVGYYGTSEDR---VFTEEDS  129 (292)
T ss_pred             EEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhc--------CCCceEEEEeeeEEEeCCCCCC---CcCcccC
Confidence            9999996433222233445667889999988888887532        1112334334443333322111   1222221


Q ss_pred             CCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHH-----HHH----HhhcCChHHH
Q 021391          192 YNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCN-----TVG----KLVLKNIPQG  262 (313)
Q Consensus       192 ~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~-----~~~----~~~~~~~~ev  262 (313)
                      ..+...|...+...+...+    .+.+.+  +.+..+.|+.+-.+.............     ...    .......+|+
T Consensus       130 ~~~~~~~~~~~~~~e~~~~----~~~~~~--~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dv  203 (292)
T TIGR01777       130 PAGDDFLAELCRDWEEAAQ----AAEDLG--TRVVLLRTGIVLGPKGGALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDL  203 (292)
T ss_pred             CCCCChHHHHHHHHHHHhh----hchhcC--CceEEEeeeeEECCCcchhHHHHHHHhcCcccccCCCCcccccEeHHHH
Confidence            2222234434434333322    233446  889999999987663211110000000     000    1134678999


Q ss_pred             HHHHHHHHcc
Q 021391          263 AATTCYVALH  272 (313)
Q Consensus       263 a~~~~~l~~~  272 (313)
                      |+.+..++.+
T Consensus       204 a~~i~~~l~~  213 (292)
T TIGR01777       204 VQLILFALEN  213 (292)
T ss_pred             HHHHHHHhcC
Confidence            9999999974

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.28  E-value=1.7e-10  Score=102.78  Aligned_cols=183  Identities=16%  Similarity=0.144  Sum_probs=142.2

Q ss_pred             CCEEEEeCC-CCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           29 GLTAIVTGA-SSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        29 gk~~lItGa-s~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      ...|||.|. +.-|++.+|..|-++|+-|+++..+.++.....++    . ...+.....|..++.++...++++.+...
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e----~-~~dI~~L~ld~~~~~~~~~~l~~f~~~L~   77 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESE----D-RPDIRPLWLDDSDPSSIHASLSRFASLLS   77 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhc----c-CCCCCCcccCCCCCcchHHHHHHHHHHhc
Confidence            357889995 79999999999999999999999987664443332    2 33477788888888777777777665432


Q ss_pred             --------------CeeEEEEcccCCCCCC---ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEEC-
Q 021391          108 --------------PLNILINNAGIMASPF---MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVS-  169 (313)
Q Consensus       108 --------------~id~lv~~ag~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~is-  169 (313)
                                    .+..||.......+..   .++.+.|.+.++.|+..++.+++.++|++....   ..+.+||+++ 
T Consensus        78 ~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~---~~~~~iil~~P  154 (299)
T PF08643_consen   78 RPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRS---NQKSKIILFNP  154 (299)
T ss_pred             CCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---CCCceEEEEeC
Confidence                          3566666655433322   678899999999999999999999999998732   2367777776 


Q ss_pred             CccccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccC
Q 021391          170 SEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTN  236 (313)
Q Consensus       170 S~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~  236 (313)
                      |+.+....|               ..+.-.....++.+|++.|.+|+++.+  |.|..|..|.++-.
T Consensus       155 si~ssl~~P---------------fhspE~~~~~al~~~~~~LrrEl~~~~--I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  155 SISSSLNPP---------------FHSPESIVSSALSSFFTSLRRELRPHN--IDVTQIKLGNLDIG  204 (299)
T ss_pred             chhhccCCC---------------ccCHHHHHHHHHHHHHHHHHHHhhhcC--CceEEEEeeeeccc
Confidence            555555555               566788899999999999999999999  99999999988755

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PRK05865 hypothetical protein; Provisional

Probab=99.25  E-value=1e-10  Score=118.08  Aligned_cols=164  Identities=15%  Similarity=0.116  Sum_probs=115.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      ++++||||+|+||++++++|+++|++|++++|+....      +     ..++.++.+|++|.+++.++++       ++
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~-----~~~v~~v~gDL~D~~~l~~al~-------~v   62 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W-----PSSADFIAADIRDATAVESAMT-------GA   62 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c-----ccCceEEEeeCCCHHHHHHHHh-------CC
Confidence            4699999999999999999999999999999874321      1     1257789999999999888776       58


Q ss_pred             eEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCC
Q 021391          110 NILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDE  189 (313)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~  189 (313)
                      |+|||+|+....           .+++|+.++.++++++.    +     ...+++|++||..                 
T Consensus        63 D~VVHlAa~~~~-----------~~~vNv~GT~nLLeAa~----~-----~gvkr~V~iSS~~-----------------  105 (854)
T PRK05865         63 DVVAHCAWVRGR-----------NDHINIDGTANVLKAMA----E-----TGTGRIVFTSSGH-----------------  105 (854)
T ss_pred             CEEEECCCcccc-----------hHHHHHHHHHHHHHHHH----H-----cCCCeEEEECCcH-----------------
Confidence            999999975321           46889999888877654    3     1245899998721                 


Q ss_pred             CCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHH--HHHH------hhcCChHH
Q 021391          190 SAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCN--TVGK------LVLKNIPQ  261 (313)
Q Consensus       190 ~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~--~~~~------~~~~~~~e  261 (313)
                                  |.+.+.+++.       .|  +.+..+.|+.+-.+....  +......  ....      ..+...+|
T Consensus       106 ------------K~aaE~ll~~-------~g--l~~vILRp~~VYGP~~~~--~i~~ll~~~v~~~G~~~~~~dfIhVdD  162 (854)
T PRK05865        106 ------------QPRVEQMLAD-------CG--LEWVAVRCALIFGRNVDN--WVQRLFALPVLPAGYADRVVQVVHSDD  162 (854)
T ss_pred             ------------HHHHHHHHHH-------cC--CCEEEEEeceEeCCChHH--HHHHHhcCceeccCCCCceEeeeeHHH
Confidence                        7666655532       35  788888888876653211  1111110  0000      02456899


Q ss_pred             HHHHHHHHHc
Q 021391          262 GAATTCYVAL  271 (313)
Q Consensus       262 va~~~~~l~~  271 (313)
                      +|++++.++.
T Consensus       163 VA~Ai~~aL~  172 (854)
T PRK05865        163 AQRLLVRALL  172 (854)
T ss_pred             HHHHHHHHHh
Confidence            9999988875

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.24  E-value=5.9e-10  Score=101.04  Aligned_cols=178  Identities=21%  Similarity=0.254  Sum_probs=119.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC-CEEEEEecCch---hHHHHHHHHH-----HhCCCCceEEEEccCCCHH------H
Q 021391           30 LTAIVTGASSGIGTETARVLALRG-VHVIMAVRNMA---AGKDVREAIV-----KEIPSAKVDAMELDVSSLA------S   94 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G-~~V~l~~r~~~---~~~~~~~~l~-----~~~~~~~~~~~~~D~s~~~------~   94 (313)
                      +++|+|||||.+|+.+.++|+.+- ++|+...|-.+   ..+.+.+.+.     .+....+++.+..|++.++      .
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            579999999999999999998764 59999988443   2233333332     1223568999999999543      4


Q ss_pred             HHHHHHHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccc
Q 021391           95 VRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHR  174 (313)
Q Consensus        95 v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~  174 (313)
                      ...+++       .+|.+|||+....-     ...+.+....|+.|+..+++.+.-.         +...+.+|||++..
T Consensus        81 ~~~La~-------~vD~I~H~gA~Vn~-----v~pYs~L~~~NVlGT~evlrLa~~g---------k~Kp~~yVSsisv~  139 (382)
T COG3320          81 WQELAE-------NVDLIIHNAALVNH-----VFPYSELRGANVLGTAEVLRLAATG---------KPKPLHYVSSISVG  139 (382)
T ss_pred             HHHHhh-------hcceEEecchhhcc-----cCcHHHhcCcchHhHHHHHHHHhcC---------CCceeEEEeeeeec
Confidence            444444       58999999986532     3456677789999999998877422         12348999998754


Q ss_pred             cccc-CCC--CCCCC-CC-CCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccc
Q 021391          175 FAYS-EGI--RFDKI-ND-ESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIV  234 (313)
Q Consensus       175 ~~~~-~~~--~~~~~-~~-~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~  234 (313)
                      .... .+.  ++++. +. ...-.....|+.||.+.|.+++....    .|  +++..+.||++-
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~----rG--Lpv~I~Rpg~I~  198 (382)
T COG3320         140 ETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGD----RG--LPVTIFRPGYIT  198 (382)
T ss_pred             cccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHhh----cC--CCeEEEecCeee
Confidence            3321 111  22211 11 11222346899999999987776554    46  888899999984

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.23  E-value=5.9e-11  Score=103.05  Aligned_cols=184  Identities=16%  Similarity=0.145  Sum_probs=136.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHH-h-CCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVK-E-IPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~-~-~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      .+|++||||-||--|.-+|+.|++.|+.|+.+.|.........-.|.. . ..+.+++++.+|++|..++.++++++   
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v---   77 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV---   77 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc---
Confidence            369999999999999999999999999999999864332211101111 1 12446899999999999999999988   


Q ss_pred             CCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCC
Q 021391          106 GRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDK  185 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  185 (313)
                        .+|-+.|.++.+.-  ..+.+....+.+++.+|+++++.++.-+-.+       +.++..-|| +-..+.-   ....
T Consensus        78 --~PdEIYNLaAQS~V--~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~-------~~rfYQASt-SE~fG~v---~~~p  142 (345)
T COG1089          78 --QPDEIYNLAAQSHV--GVSFEQPEYTADVDAIGTLRLLEAIRILGEK-------KTRFYQAST-SELYGLV---QEIP  142 (345)
T ss_pred             --Cchhheeccccccc--cccccCcceeeeechhHHHHHHHHHHHhCCc-------ccEEEeccc-HHhhcCc---ccCc
Confidence              89999999985432  5677888889999999999999998766432       345555554 3333321   2223


Q ss_pred             CCCCCCCCccccchHhHHHHHHHHHHHHHHhc---cCCCcEEEEEeeCc
Q 021391          186 INDESAYNSFGAYGQSKLANILHAKELAKHLK---EDGVNITANSLHPG  231 (313)
Q Consensus       186 ~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~---~~g~~I~vn~i~PG  231 (313)
                      .++.++|.+.++|+++|....-++..+...++   -.|  |-+|.=+|.
T Consensus       143 q~E~TPFyPrSPYAvAKlYa~W~tvNYResYgl~AcnG--ILFNHESP~  189 (345)
T COG1089         143 QKETTPFYPRSPYAVAKLYAYWITVNYRESYGLFACNG--ILFNHESPL  189 (345)
T ss_pred             cccCCCCCCCCHHHHHHHHHHheeeehHhhcCceeecc--eeecCCCCC
Confidence            56788999999999999988877777776664   345  888888875

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.23  E-value=3.6e-10  Score=113.48  Aligned_cols=156  Identities=12%  Similarity=0.044  Sum_probs=104.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      ..+++|||||+|.||+++++.|.++|++|...                          ..|++|.+++..++++.     
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~--------------------------~~~l~d~~~v~~~i~~~-----  427 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG--------------------------KGRLEDRSSLLADIRNV-----  427 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCeEEee--------------------------ccccccHHHHHHHHHhh-----
Confidence            44689999999999999999999999887311                          13577888887777764     


Q ss_pred             CeeEEEEcccCCCCCC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC-C-CC
Q 021391          108 PLNILINNAGIMASPF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI-R-FD  184 (313)
Q Consensus       108 ~id~lv~~ag~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~-~-~~  184 (313)
                      ++|+|||+|+....+. +...+..+..+++|+.++.++++++...          +.++|++||........... . -.
T Consensus       428 ~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~----------g~~~v~~Ss~~v~~~~~~~~~~~~~  497 (668)
T PLN02260        428 KPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCREN----------GLLMMNFATGCIFEYDAKHPEGSGI  497 (668)
T ss_pred             CCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc----------CCeEEEEcccceecCCcccccccCC
Confidence            7999999999764432 3344566788999999999999998643          33566776643322110000 0 00


Q ss_pred             CCCCC-CCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEee
Q 021391          185 KINDE-SAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLH  229 (313)
Q Consensus       185 ~~~~~-~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~  229 (313)
                      .+.++ .+.+....|+.||.+.+.+++.+..   ...  +|+..+.
T Consensus       498 p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~~~---~~~--~r~~~~~  538 (668)
T PLN02260        498 GFKEEDKPNFTGSFYSKTKAMVEELLREYDN---VCT--LRVRMPI  538 (668)
T ss_pred             CCCcCCCCCCCCChhhHHHHHHHHHHHhhhh---heE--EEEEEec
Confidence            12222 2222336899999999999887642   123  5555554

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.22  E-value=1.3e-09  Score=87.21  Aligned_cols=214  Identities=14%  Similarity=0.068  Sum_probs=152.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC-
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG-  106 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~-  106 (313)
                      .-.+++|-||-+.+|.+++..|-.+++.|.-++..+.+-            .+.-+.+..|-+=.++-+.+.+++-+.. 
T Consensus         2 sagrVivYGGkGALGSacv~~FkannywV~siDl~eNe~------------Ad~sI~V~~~~swtEQe~~v~~~vg~sL~   69 (236)
T KOG4022|consen    2 SAGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ------------ADSSILVDGNKSWTEQEQSVLEQVGSSLQ   69 (236)
T ss_pred             CCceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc------------ccceEEecCCcchhHHHHHHHHHHHHhhc
Confidence            346899999999999999999999999998887653220            1223455566555666677777776544 


Q ss_pred             -CCeeEEEEcccCCCCCCcc---CccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          107 -RPLNILINNAGIMASPFML---SKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       107 -g~id~lv~~ag~~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                       .++|.+++-||.+.....-   -....+.++.-.+...-.-.+.+..+++.       +|-+-..+.-++..+.|    
T Consensus        70 gekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~-------GGLL~LtGAkaAl~gTP----  138 (236)
T KOG4022|consen   70 GEKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKP-------GGLLQLTGAKAALGGTP----  138 (236)
T ss_pred             ccccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCC-------CceeeecccccccCCCC----
Confidence             3799999999976543321   12345566777777776666766666654       55555555556666666    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhc--cCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChH
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLK--EDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIP  260 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~--~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  260 (313)
                                 ++-.|+.+|+|++.++++|+.+-.  +.|  -.+..|-|-..+|||.+.+....++..      ....+
T Consensus       139 -----------gMIGYGMAKaAVHqLt~SLaak~SGlP~g--saa~~ilPVTLDTPMNRKwMP~ADfss------WTPL~  199 (236)
T KOG4022|consen  139 -----------GMIGYGMAKAAVHQLTSSLAAKDSGLPDG--SAALTILPVTLDTPMNRKWMPNADFSS------WTPLS  199 (236)
T ss_pred             -----------cccchhHHHHHHHHHHHHhcccccCCCCC--ceeEEEeeeeccCccccccCCCCcccC------cccHH
Confidence                       788999999999999999997754  344  678889999999999887633333322      24567


Q ss_pred             HHHHHHHHHHccCCccCCCceeec
Q 021391          261 QGAATTCYVALHPQVQGVSGEYFS  284 (313)
Q Consensus       261 eva~~~~~l~~~~~~~~~tG~~~~  284 (313)
                      ++++..+-+.+ +..+--+|..+.
T Consensus       200 fi~e~flkWtt-~~~RPssGsLlq  222 (236)
T KOG4022|consen  200 FISEHFLKWTT-ETSRPSSGSLLQ  222 (236)
T ss_pred             HHHHHHHHHhc-cCCCCCCCceEE
Confidence            89999999987 666777887665

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.22  E-value=1.8e-09  Score=116.73  Aligned_cols=223  Identities=19%  Similarity=0.149  Sum_probs=135.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcC----CEEEEEecCchhHHH---HHHHHHHhC-----CCCceEEEEccCCCHHHH
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRG----VHVIMAVRNMAAGKD---VREAIVKEI-----PSAKVDAMELDVSSLASV   95 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G----~~V~l~~r~~~~~~~---~~~~l~~~~-----~~~~~~~~~~D~s~~~~v   95 (313)
                      +.++++||||+|.||.+++++|+++|    .+|+.+.|+......   ..+.+....     ...++.++..|++++.--
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            35899999999999999999999987    789999997543222   111111100     013688999999865200


Q ss_pred             --HHHHHHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391           96 --RKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus        96 --~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                        ....+++.   ..+|++||||+....     ...+......|+.++.++++.+...         +..+++++||.+.
T Consensus      1050 l~~~~~~~l~---~~~d~iiH~Aa~~~~-----~~~~~~~~~~nv~gt~~ll~~a~~~---------~~~~~v~vSS~~v 1112 (1389)
T TIGR03443      1050 LSDEKWSDLT---NEVDVIIHNGALVHW-----VYPYSKLRDANVIGTINVLNLCAEG---------KAKQFSFVSSTSA 1112 (1389)
T ss_pred             cCHHHHHHHH---hcCCEEEECCcEecC-----ccCHHHHHHhHHHHHHHHHHHHHhC---------CCceEEEEeCeee
Confidence              11122221   268999999986532     1234445568999999999877432         1348999999765


Q ss_pred             cccccC-------------CCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccc
Q 021391          174 RFAYSE-------------GIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY  240 (313)
Q Consensus       174 ~~~~~~-------------~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~  240 (313)
                      ......             ....++............|+.||.+.+.+++.++.    .|  +.+..+.||.+-.+....
T Consensus      1113 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g--~~~~i~Rpg~v~G~~~~g 1186 (1389)
T TIGR03443      1113 LDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RG--LRGCIVRPGYVTGDSKTG 1186 (1389)
T ss_pred             cCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CC--CCEEEECCCccccCCCcC
Confidence            422100             00000000011122335699999999998876543    36  889999999986543221


Q ss_pred             ----cchhHhHHHHH------H----HhhcCChHHHHHHHHHHHccC
Q 021391          241 ----NGILRGFCNTV------G----KLVLKNIPQGAATTCYVALHP  273 (313)
Q Consensus       241 ----~~~~~~~~~~~------~----~~~~~~~~eva~~~~~l~~~~  273 (313)
                          ..+........      +    ..-....++++++++.++.++
T Consensus      1187 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~ 1233 (1389)
T TIGR03443      1187 ATNTDDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNP 1233 (1389)
T ss_pred             CCCchhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCC
Confidence                12222222211      1    012356888999999988643

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.21  E-value=1.6e-10  Score=110.64  Aligned_cols=155  Identities=17%  Similarity=0.128  Sum_probs=111.3

Q ss_pred             EeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCeeEEE
Q 021391           34 VTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILI  113 (313)
Q Consensus        34 ItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~id~lv  113 (313)
                      |+||++|+|.++++.|...|+.|+.+.+...+...        ....++..+.+|.+..+..+.                
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~--------~~~~~~~~~~~d~~~~~~~~~----------------   98 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAA--------GWGDRFGALVFDATGITDPAD----------------   98 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCCeeeecCcccccccc--------CcCCcccEEEEECCCCCCHHH----------------
Confidence            77888999999999999999999988665431100        001123333333333322211                


Q ss_pred             EcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCCCCCC
Q 021391          114 NNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYN  193 (313)
Q Consensus       114 ~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~  193 (313)
                                              +.+.+.+.+..++.|.+       +|+||+++|.....                  
T Consensus        99 ------------------------l~~~~~~~~~~l~~l~~-------~griv~i~s~~~~~------------------  129 (450)
T PRK08261         99 ------------------------LKALYEFFHPVLRSLAP-------CGRVVVLGRPPEAA------------------  129 (450)
T ss_pred             ------------------------HHHHHHHHHHHHHhccC-------CCEEEEEccccccC------------------
Confidence                                    22444667777777754       68999999976643                  


Q ss_pred             ccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHHHHHHHHHHccC
Q 021391          194 SFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGAATTCYVALHP  273 (313)
Q Consensus       194 ~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~eva~~~~~l~~~~  273 (313)
                      ....|+++|+++.+++|+++.|+ +.+  |++|+|.|++                        ..++++++.+.|+++ +
T Consensus       130 ~~~~~~~akaal~gl~rsla~E~-~~g--i~v~~i~~~~------------------------~~~~~~~~~~~~l~s-~  181 (450)
T PRK08261        130 ADPAAAAAQRALEGFTRSLGKEL-RRG--ATAQLVYVAP------------------------GAEAGLESTLRFFLS-P  181 (450)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHh-hcC--CEEEEEecCC------------------------CCHHHHHHHHHHhcC-C
Confidence            23469999999999999999999 678  9999999875                        246788889999987 7


Q ss_pred             CccCCCceeecCCccc
Q 021391          274 QVQGVSGEYFSDSNIY  289 (313)
Q Consensus       274 ~~~~~tG~~~~~~~~~  289 (313)
                      .+.+++|+.+..++..
T Consensus       182 ~~a~~~g~~i~~~~~~  197 (450)
T PRK08261        182 RSAYVSGQVVRVGAAD  197 (450)
T ss_pred             ccCCccCcEEEecCCc
Confidence            8889999988866544

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.20  E-value=9.1e-10  Score=107.83  Aligned_cols=127  Identities=13%  Similarity=0.129  Sum_probs=89.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC---EEEEEecCch--hHHHHH-HHH---------HHhCC-------CCceEE
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV---HVIMAVRNMA--AGKDVR-EAI---------VKEIP-------SAKVDA   84 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~---~V~l~~r~~~--~~~~~~-~~l---------~~~~~-------~~~~~~   84 (313)
                      ++||+++||||||.||+.++++|++.+.   +|+++.|...  ...+.. +++         ++.++       ..+++.
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            6899999999999999999999998753   6899988542  222222 222         22222       247899


Q ss_pred             EEccCCCHH------HHHHHHHHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhcc
Q 021391           85 MELDVSSLA------SVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQK  158 (313)
Q Consensus        85 ~~~D~s~~~------~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~  158 (313)
                      +..|++++.      ..+.+.+       .+|+|||+|+....     .+.++..+++|+.++.++++.+...-      
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f-----~~~~~~a~~vNV~GT~nLLelA~~~~------  258 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTTF-----DERYDVAIDINTRGPCHLMSFAKKCK------  258 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHHh-------cCCEEEECcccccc-----ccCHHHHHHHHHHHHHHHHHHHHHcC------
Confidence            999999973      3333332       58999999987532     24678889999999999999876431      


Q ss_pred             CCCCCeEEEECCccc
Q 021391          159 SSREGRIVNVSSEAH  173 (313)
Q Consensus       159 ~~~~g~iv~isS~~~  173 (313)
                        .-.++|++||...
T Consensus       259 --~lk~fV~vSTayV  271 (605)
T PLN02503        259 --KLKLFLQVSTAYV  271 (605)
T ss_pred             --CCCeEEEccCcee
Confidence              1236888887644

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.17  E-value=1.7e-09  Score=93.94  Aligned_cols=168  Identities=17%  Similarity=0.114  Sum_probs=114.4

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      .+.....+++++||||+|.||+++|.+|..+|..|++++.-.........-.   .....++.+..|+..+     ++. 
T Consensus        20 ~~~~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~---~~~~~fel~~hdv~~p-----l~~-   90 (350)
T KOG1429|consen   20 EQVKPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHW---IGHPNFELIRHDVVEP-----LLK-   90 (350)
T ss_pred             hcccCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchh---ccCcceeEEEeechhH-----HHH-
Confidence            4556678899999999999999999999999999999986433322222111   1233677777777766     344 


Q ss_pred             HhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          102 YNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                            .+|-++|.|...++..  -...--+++..|+++.++++..+...          +.|++..|+ +-.++.|...
T Consensus        91 ------evD~IyhLAapasp~~--y~~npvktIktN~igtln~lglakrv----------~aR~l~aST-seVYgdp~~h  151 (350)
T KOG1429|consen   91 ------EVDQIYHLAAPASPPH--YKYNPVKTIKTNVIGTLNMLGLAKRV----------GARFLLAST-SEVYGDPLVH  151 (350)
T ss_pred             ------HhhhhhhhccCCCCcc--cccCccceeeecchhhHHHHHHHHHh----------CceEEEeec-ccccCCcccC
Confidence                  5788999998776533  11223467889999999999888655          346666655 4444544322


Q ss_pred             CCCCCCC--CCCCCccccchHhHHHHHHHHHHHHHHhc
Q 021391          182 RFDKIND--ESAYNSFGAYGQSKLANILHAKELAKHLK  217 (313)
Q Consensus       182 ~~~~~~~--~~~~~~~~~Y~asK~a~~~l~~~la~e~~  217 (313)
                      +..+...  -.+..+.++|.-.|.+.+.|+..+..+.+
T Consensus       152 pq~e~ywg~vnpigpr~cydegKr~aE~L~~~y~k~~g  189 (350)
T KOG1429|consen  152 PQVETYWGNVNPIGPRSCYDEGKRVAETLCYAYHKQEG  189 (350)
T ss_pred             CCccccccccCcCCchhhhhHHHHHHHHHHHHhhcccC
Confidence            2222221  22334568999999999999988777655

>PLN00016 RNA-binding protein; Provisional

Probab=99.08  E-value=6.9e-09  Score=97.21  Aligned_cols=191  Identities=16%  Similarity=0.098  Sum_probs=112.6

Q ss_pred             CCCCCEEEEe----CCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHH-------HHHHHhCCCCceEEEEccCCCHHH
Q 021391           26 DGTGLTAIVT----GASSGIGTETARVLALRGVHVIMAVRNMAAGKDVR-------EAIVKEIPSAKVDAMELDVSSLAS   94 (313)
Q Consensus        26 ~~~gk~~lIt----Gas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~-------~~l~~~~~~~~~~~~~~D~s~~~~   94 (313)
                      ....++||||    ||+|.||++++++|+++|++|++++|+........       .++.    ...+.++.+|+.|   
T Consensus        49 ~~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~----~~~v~~v~~D~~d---  121 (378)
T PLN00016         49 AVEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS----SAGVKTVWGDPAD---  121 (378)
T ss_pred             ccccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh----hcCceEEEecHHH---
Confidence            3455889999    99999999999999999999999999875432211       1111    2247888999877   


Q ss_pred             HHHHHHHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccc
Q 021391           95 VRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHR  174 (313)
Q Consensus        95 v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~  174 (313)
                      +..++.     ..++|+|||+++..                  ..+...++++    ..+     ..-.++|++||...+
T Consensus       122 ~~~~~~-----~~~~d~Vi~~~~~~------------------~~~~~~ll~a----a~~-----~gvkr~V~~SS~~vy  169 (378)
T PLN00016        122 VKSKVA-----GAGFDVVYDNNGKD------------------LDEVEPVADW----AKS-----PGLKQFLFCSSAGVY  169 (378)
T ss_pred             HHhhhc-----cCCccEEEeCCCCC------------------HHHHHHHHHH----HHH-----cCCCEEEEEccHhhc
Confidence            332221     13689999997521                  1122233333    333     223489999997644


Q ss_pred             ccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHH-
Q 021391          175 FAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGK-  253 (313)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~-  253 (313)
                      .... ..   ...+.....+   +. +|...+.+.+       ..+  +.+..+.|+.+-.+..... ....+...+.. 
T Consensus       170 g~~~-~~---p~~E~~~~~p---~~-sK~~~E~~l~-------~~~--l~~~ilRp~~vyG~~~~~~-~~~~~~~~~~~~  231 (378)
T PLN00016        170 KKSD-EP---PHVEGDAVKP---KA-GHLEVEAYLQ-------KLG--VNWTSFRPQYIYGPGNNKD-CEEWFFDRLVRG  231 (378)
T ss_pred             CCCC-CC---CCCCCCcCCC---cc-hHHHHHHHHH-------HcC--CCeEEEeceeEECCCCCCc-hHHHHHHHHHcC
Confidence            3211 10   0111111212   22 7888776543       245  8888999998876643221 11111111100 


Q ss_pred             ------------hhcCChHHHHHHHHHHHccC
Q 021391          254 ------------LVLKNIPQGAATTCYVALHP  273 (313)
Q Consensus       254 ------------~~~~~~~eva~~~~~l~~~~  273 (313)
                                  ......+|+|++++.++.++
T Consensus       232 ~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~  263 (378)
T PLN00016        232 RPVPIPGSGIQLTQLGHVKDLASMFALVVGNP  263 (378)
T ss_pred             CceeecCCCCeeeceecHHHHHHHHHHHhcCc
Confidence                        11346899999999998743

>PRK12320 hypothetical protein; Provisional

Probab=99.06  E-value=9.3e-09  Score=102.04  Aligned_cols=103  Identities=18%  Similarity=0.184  Sum_probs=77.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCee
Q 021391           31 TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLN  110 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~id  110 (313)
                      ++|||||+|.||++++++|+++|++|++++|+....         .  ...+.++.+|+++.. +..+++       ++|
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---------~--~~~ve~v~~Dl~d~~-l~~al~-------~~D   62 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---------L--DPRVDYVCASLRNPV-LQELAG-------EAD   62 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---------c--cCCceEEEccCCCHH-HHHHhc-------CCC
Confidence            699999999999999999999999999999864321         0  235789999999973 433332       689


Q ss_pred             EEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391          111 ILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus       111 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                      ++||+++....          ....+|+.+..++++++...          +.++|++||..
T Consensus        63 ~VIHLAa~~~~----------~~~~vNv~Gt~nLleAA~~~----------GvRiV~~SS~~  104 (699)
T PRK12320         63 AVIHLAPVDTS----------APGGVGITGLAHVANAAARA----------GARLLFVSQAA  104 (699)
T ss_pred             EEEEcCccCcc----------chhhHHHHHHHHHHHHHHHc----------CCeEEEEECCC
Confidence            99999986311          11257899999988887421          34899998764

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.05  E-value=4.5e-10  Score=97.61  Aligned_cols=97  Identities=14%  Similarity=0.271  Sum_probs=72.2

Q ss_pred             EEeCC-CCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCeeE
Q 021391           33 IVTGA-SSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNI  111 (313)
Q Consensus        33 lItGa-s~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~id~  111 (313)
                      .||.. |||||+++|+.|+++|++|+++++...        +..   .   ....+|+++.++++++++.+.+.++++|+
T Consensus        18 ~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~---~---~~~~~Dv~d~~s~~~l~~~v~~~~g~iDi   83 (227)
T TIGR02114        18 SITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKP---E---PHPNLSIREIETTKDLLITLKELVQEHDI   83 (227)
T ss_pred             eecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------ccc---c---cCCcceeecHHHHHHHHHHHHHHcCCCCE
Confidence            45544 679999999999999999999976311        100   0   02468999999999999999999999999


Q ss_pred             EEEcccCCCC-CC-ccCccchhhhhhhhhhHHHHHHH
Q 021391          112 LINNAGIMAS-PF-MLSKDNIELQFATNHLGHFLLTH  146 (313)
Q Consensus       112 lv~~ag~~~~-~~-~~~~~~~~~~~~~n~~~~~~l~~  146 (313)
                      +|||||+... +. +.+.++|+++   +..+.+++.+
T Consensus        84 LVnnAgv~d~~~~~~~s~e~~~~~---~~~~~~~~~~  117 (227)
T TIGR02114        84 LIHSMAVSDYTPVYMTDLEQVQAS---DNLNEFLSKQ  117 (227)
T ss_pred             EEECCEeccccchhhCCHHHHhhh---cchhhhhccc
Confidence            9999997643 22 6677777766   4445555554

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.03  E-value=4e-09  Score=94.74  Aligned_cols=176  Identities=16%  Similarity=0.138  Sum_probs=107.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC-e
Q 021391           31 TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP-L  109 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~-i  109 (313)
                      +++||||||.+|++++++|+++|++|.++.|+.++..           ...+..+.+|+.|++++..+++.. ..+.+ +
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~-----------~~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~   68 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA-----------GPNEKHVKFDWLDEDTWDNPFSSD-DGMEPEI   68 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc-----------CCCCccccccCCCHHHHHHHHhcc-cCcCCce
Confidence            4899999999999999999999999999999976432           124566789999999998888653 33345 9


Q ss_pred             eEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCC
Q 021391          110 NILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDE  189 (313)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~  189 (313)
                      |.++++++...       +..            ...+.++....+     ..-.+||++||.....+             
T Consensus        69 d~v~~~~~~~~-------~~~------------~~~~~~i~aa~~-----~gv~~~V~~Ss~~~~~~-------------  111 (285)
T TIGR03649        69 SAVYLVAPPIP-------DLA------------PPMIKFIDFARS-----KGVRRFVLLSASIIEKG-------------  111 (285)
T ss_pred             eEEEEeCCCCC-------Chh------------HHHHHHHHHHHH-----cCCCEEEEeeccccCCC-------------
Confidence            99999986321       100            111233333444     22358999987543211             


Q ss_pred             CCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc---chhH--hHHH--HHHHhhcCChHHH
Q 021391          190 SAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN---GILR--GFCN--TVGKLVLKNIPQG  262 (313)
Q Consensus       190 ~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~---~~~~--~~~~--~~~~~~~~~~~ev  262 (313)
                               ...+..++.+.+..      .|  +....+.|+++..++....   ....  .+..  .-....+..++|+
T Consensus       112 ---------~~~~~~~~~~l~~~------~g--i~~tilRp~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~Dv  174 (285)
T TIGR03649       112 ---------GPAMGQVHAHLDSL------GG--VEYTVLRPTWFMENFSEEFHVEAIRKENKIYSATGDGKIPFVSADDI  174 (285)
T ss_pred             ---------CchHHHHHHHHHhc------cC--CCEEEEeccHHhhhhcccccccccccCCeEEecCCCCccCcccHHHH
Confidence                     01122222222111      36  8888999997654432110   0000  0000  0111235789999


Q ss_pred             HHHHHHHHcc
Q 021391          263 AATTCYVALH  272 (313)
Q Consensus       263 a~~~~~l~~~  272 (313)
                      |+.+..++.+
T Consensus       175 a~~~~~~l~~  184 (285)
T TIGR03649       175 ARVAYRALTD  184 (285)
T ss_pred             HHHHHHHhcC
Confidence            9999999874

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.98  E-value=7.2e-09  Score=90.14  Aligned_cols=201  Identities=13%  Similarity=0.106  Sum_probs=117.6

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCeeE
Q 021391           32 AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNI  111 (313)
Q Consensus        32 ~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~id~  111 (313)
                      ++||||||-||++++.+|.+.|..|+++.|+..+.+...        ...+.       ..+.+    ++..  ..++|+
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~--------~~~v~-------~~~~~----~~~~--~~~~Da   59 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL--------HPNVT-------LWEGL----ADAL--TLGIDA   59 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc--------Ccccc-------ccchh----hhcc--cCCCCE
Confidence            589999999999999999999999999999987654322        11111       11111    1111  117999


Q ss_pred             EEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCCCC
Q 021391          112 LINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESA  191 (313)
Q Consensus       112 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~  191 (313)
                      |||.||..-.....+.+.=+.    =..+.+..++.+.....+.    .+++++..-+|..|+++.....   .+.++.+
T Consensus        60 vINLAG~~I~~rrWt~~~K~~----i~~SRi~~T~~L~e~I~~~----~~~P~~~isaSAvGyYG~~~~~---~~tE~~~  128 (297)
T COG1090          60 VINLAGEPIAERRWTEKQKEE----IRQSRINTTEKLVELIAAS----ETKPKVLISASAVGYYGHSGDR---VVTEESP  128 (297)
T ss_pred             EEECCCCccccccCCHHHHHH----HHHHHhHHHHHHHHHHHhc----cCCCcEEEecceEEEecCCCce---eeecCCC
Confidence            999999643222122222222    2456777778887777763    3467777777888887754221   1111111


Q ss_pred             CCccccchHhHHHHHHHHHHHHHH---hccCCCcEEEEEeeCcccccCCccccchhHhHHHH-----HH----HhhcCCh
Q 021391          192 YNSFGAYGQSKLANILHAKELAKH---LKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNT-----VG----KLVLKNI  259 (313)
Q Consensus       192 ~~~~~~Y~asK~a~~~l~~~la~e---~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~-----~~----~~~~~~~  259 (313)
                      + +       .-++.-+|+.|-.+   ....|  +||..+.-|.|..+-......+....+.     ..    .......
T Consensus       129 ~-g-------~~Fla~lc~~WE~~a~~a~~~g--tRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhi  198 (297)
T COG1090         129 P-G-------DDFLAQLCQDWEEEALQAQQLG--TRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHI  198 (297)
T ss_pred             C-C-------CChHHHHHHHHHHHHhhhhhcC--ceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeH
Confidence            1 1       11222344544433   33446  9999999999866433322111111111     11    1124678


Q ss_pred             HHHHHHHHHHHccCC
Q 021391          260 PQGAATTCYVALHPQ  274 (313)
Q Consensus       260 ~eva~~~~~l~~~~~  274 (313)
                      +|..+.+.|++.+..
T Consensus       199 eD~v~~I~fll~~~~  213 (297)
T COG1090         199 EDLVNAILFLLENEQ  213 (297)
T ss_pred             HHHHHHHHHHHhCcC
Confidence            999999999998543

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.97  E-value=6.1e-08  Score=92.24  Aligned_cols=226  Identities=17%  Similarity=0.096  Sum_probs=145.0

Q ss_pred             ccCCCCCCCEEEEeCCC-CchHHHHHHHHHHcCCEEEEEecCc-hhHHHHHHHHHHhC--CCCceEEEEccCCCHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGAS-SGIGTETARVLALRGVHVIMAVRNM-AAGKDVREAIVKEI--PSAKVDAMELDVSSLASVRK   97 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas-~giG~aia~~La~~G~~V~l~~r~~-~~~~~~~~~l~~~~--~~~~~~~~~~D~s~~~~v~~   97 (313)
                      -++..+.+|++|||||+ +.||.+++.+|++.|++||++..+. ++..+..+.|...+  ++..+.++.+++.+-..|++
T Consensus       389 p~~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdA  468 (866)
T COG4982         389 PNGGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDA  468 (866)
T ss_pred             CCCCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHH
Confidence            36677899999999999 6799999999999999999987554 55667778887765  36678999999999999999


Q ss_pred             HHHHHhhcC----C----------CeeEEEEcccCCCCCCccCccchh--hhhhhhhhHHHHHHHHHHHHHHHhhccCCC
Q 021391           98 FASEYNSQG----R----------PLNILINNAGIMASPFMLSKDNIE--LQFATNHLGHFLLTHLLLDTMKKTAQKSSR  161 (313)
Q Consensus        98 ~~~~~~~~~----g----------~id~lv~~ag~~~~~~~~~~~~~~--~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~  161 (313)
                      +++-|-.+.    |          .+|.+|--|.+.... ++..-+-+  -.+.+-+++..+++-.+.+.-....  -..
T Consensus       469 lIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G-~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~--v~~  545 (866)
T COG4982         469 LIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSG-ELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRG--VDT  545 (866)
T ss_pred             HHHHhccccccccCCcceecccccCcceeeecccCCccC-ccccCCchHHHHHHHHHHHHHHHHHHhhhhccccC--ccc
Confidence            999884432    1          245666555433222 22222222  2234445555555555444322210  011


Q ss_pred             CCeEEEECCcc-ccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHH--hccCCCcEEEEEeeCcccc-cCC
Q 021391          162 EGRIVNVSSEA-HRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKH--LKEDGVNITANSLHPGSIV-TNL  237 (313)
Q Consensus       162 ~g~iv~isS~~-~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e--~~~~g~~I~vn~i~PG~v~-t~~  237 (313)
                      .-.||.-.|.- |..                 .+..+|+-+|++++.++.-|..|  |+.+   +.+..-.-|+++ |++
T Consensus       546 R~hVVLPgSPNrG~F-----------------GgDGaYgEsK~aldav~~RW~sEs~Wa~~---vsl~~A~IGWtrGTGL  605 (866)
T COG4982         546 RLHVVLPGSPNRGMF-----------------GGDGAYGESKLALDAVVNRWHSESSWAAR---VSLAHALIGWTRGTGL  605 (866)
T ss_pred             ceEEEecCCCCCCcc-----------------CCCcchhhHHHHHHHHHHHhhccchhhHH---HHHhhhheeeeccccc
Confidence            24566655543 232                 26789999999999887766655  3433   444445567875 555


Q ss_pred             ccccchhHhHHHHHHHhhcCChHHHHHHHHHHHc
Q 021391          238 FRYNGILRGFCNTVGKLVLKNIPQGAATTCYVAL  271 (313)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~eva~~~~~l~~  271 (313)
                      +......-....+. .-+.-+.+|.|..++-|++
T Consensus       606 Mg~Ndiiv~aiEk~-GV~tyS~~EmA~~LLgL~s  638 (866)
T COG4982         606 MGHNDIIVAAIEKA-GVRTYSTDEMAFNLLGLAS  638 (866)
T ss_pred             cCCcchhHHHHHHh-CceecCHHHHHHHHHhhcc
Confidence            55443333322222 2234578999999999987

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=98.88  E-value=6.3e-08  Score=84.37  Aligned_cols=228  Identities=14%  Similarity=0.076  Sum_probs=147.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHc--CCEEEEEec-CchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALR--GVHVIMAVR-NMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~--G~~V~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .+.|.++||||.+.||...++.+...  .++.+..+. .--......+++..   ..+..++..|+.+...+..++.+  
T Consensus         4 ~~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n---~p~ykfv~~di~~~~~~~~~~~~--   78 (331)
T KOG0747|consen    4 YKEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRN---SPNYKFVEGDIADADLVLYLFET--   78 (331)
T ss_pred             CccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhcc---CCCceEeeccccchHHHHhhhcc--
Confidence            34499999999999999999999875  445444432 11011222222221   45788999999999888777663  


Q ss_pred             hcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          104 SQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                         ..+|.|+|-|.....  +.+.-+--..+..|+++...|++.+.-..+-        -++|.+|+.-.+....    .
T Consensus        79 ---~~id~vihfaa~t~v--d~s~~~~~~~~~nnil~t~~Lle~~~~sg~i--------~~fvhvSTdeVYGds~----~  141 (331)
T KOG0747|consen   79 ---EEIDTVIHFAAQTHV--DRSFGDSFEFTKNNILSTHVLLEAVRVSGNI--------RRFVHVSTDEVYGDSD----E  141 (331)
T ss_pred             ---CchhhhhhhHhhhhh--hhhcCchHHHhcCCchhhhhHHHHHHhccCe--------eEEEEecccceecCcc----c
Confidence               389999999875432  2233334455778999999999998766432        3889999865543322    2


Q ss_pred             CCCC-CCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHH----------
Q 021391          184 DKIN-DESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVG----------  252 (313)
Q Consensus       184 ~~~~-~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~----------  252 (313)
                      +..+ +....++-..|+++|+|.+.+++++.+.++     +-+..+.-+.|-.|..-.......+.+...          
T Consensus       142 ~~~~~E~s~~nPtnpyAasKaAaE~~v~Sy~~sy~-----lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~  216 (331)
T KOG0747|consen  142 DAVVGEASLLNPTNPYAASKAAAEMLVRSYGRSYG-----LPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGD  216 (331)
T ss_pred             cccccccccCCCCCchHHHHHHHHHHHHHHhhccC-----CcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecC
Confidence            2222 455666778899999999999999988776     666666666666554332222222222110          


Q ss_pred             ---HhhcCChHHHHHHHHHHHccCCccCCCceeecC
Q 021391          253 ---KLVLKNIPQGAATTCYVALHPQVQGVSGEYFSD  285 (313)
Q Consensus       253 ---~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~  285 (313)
                         .....-++|+++++-..+.-    +-.|++.+.
T Consensus       217 g~~~rs~l~veD~~ea~~~v~~K----g~~geIYNI  248 (331)
T KOG0747|consen  217 GLQTRSYLYVEDVSEAFKAVLEK----GELGEIYNI  248 (331)
T ss_pred             cccceeeEeHHHHHHHHHHHHhc----CCccceeec
Confidence               11234688999988887752    334666554

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.84  E-value=1.3e-07  Score=87.75  Aligned_cols=216  Identities=17%  Similarity=0.144  Sum_probs=128.4

Q ss_pred             hccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHH-HHHH
Q 021391           21 VTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASV-RKFA   99 (313)
Q Consensus        21 ~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v-~~~~   99 (313)
                      +.+....+-.+|+|+||||++|+-+++.|.++|+.|..+.|+.++.++.... ..  .......+..|.....++ ..++
T Consensus        71 ~~~~~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~-~~--~d~~~~~v~~~~~~~~d~~~~~~  147 (411)
T KOG1203|consen   71 PPNNNSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGV-FF--VDLGLQNVEADVVTAIDILKKLV  147 (411)
T ss_pred             cCCCCCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcc-cc--cccccceeeeccccccchhhhhh
Confidence            3355556779999999999999999999999999999999998887776551 11  123455556665554333 3333


Q ss_pred             HHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccC
Q 021391          100 SEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSE  179 (313)
Q Consensus       100 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~  179 (313)
                      +.+   .-...+++-++|..+...     +......+.+.|..+++.++.....+         ++|++||+.+.-... 
T Consensus       148 ~~~---~~~~~~v~~~~ggrp~~e-----d~~~p~~VD~~g~knlvdA~~~aGvk---------~~vlv~si~~~~~~~-  209 (411)
T KOG1203|consen  148 EAV---PKGVVIVIKGAGGRPEEE-----DIVTPEKVDYEGTKNLVDACKKAGVK---------RVVLVGSIGGTKFNQ-  209 (411)
T ss_pred             hhc---cccceeEEecccCCCCcc-----cCCCcceecHHHHHHHHHHHHHhCCc---------eEEEEEeecCcccCC-
Confidence            322   113556777776543321     34444567888999999999555444         899999887754432 


Q ss_pred             CCCCCCCCCCCCCCccccchHhHHHHHH-H-HHHHHHHhccCCCcEEEEEeeCcccccCCcccc--chhHh--HHHHHHH
Q 021391          180 GIRFDKINDESAYNSFGAYGQSKLANIL-H-AKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--GILRG--FCNTVGK  253 (313)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~asK~a~~~-l-~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--~~~~~--~~~~~~~  253 (313)
                                       .|......... - -+....++.+.|  +....|.||..+.+.....  .....  ....-..
T Consensus       210 -----------------~~~~~~~~~~~~~~k~~~e~~~~~Sg--l~ytiIR~g~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (411)
T KOG1203|consen  210 -----------------PPNILLLNGLVLKAKLKAEKFLQDSG--LPYTIIRPGGLEQDTGGQREVVVDDEKELLTVDGG  270 (411)
T ss_pred             -----------------CchhhhhhhhhhHHHHhHHHHHHhcC--CCcEEEeccccccCCCCcceecccCcccccccccc
Confidence                             12222211111 1 123444555777  8888899998865443321  11100  0000001


Q ss_pred             hhcCChHHHHHHHHHHHccCCcc
Q 021391          254 LVLKNIPQGAATTCYVALHPQVQ  276 (313)
Q Consensus       254 ~~~~~~~eva~~~~~l~~~~~~~  276 (313)
                      ....+..++|+..+-++.++...
T Consensus       271 ~~~i~r~~vael~~~all~~~~~  293 (411)
T KOG1203|consen  271 AYSISRLDVAELVAKALLNEAAT  293 (411)
T ss_pred             ceeeehhhHHHHHHHHHhhhhhc
Confidence            01345677888887777644433

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.81  E-value=3.1e-08  Score=89.33  Aligned_cols=86  Identities=20%  Similarity=0.227  Sum_probs=67.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCE-EEEEecCc---hhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHH
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVH-VIMAVRNM---AAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFAS  100 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~-V~l~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~  100 (313)
                      .++++|+++|+|| ||+|++++..|++.|++ |++++|+.   ++.+++.+++....  ..+.+..+|+++.+++...++
T Consensus       122 ~~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~--~~~~~~~~d~~~~~~~~~~~~  198 (289)
T PRK12548        122 VDVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEV--PECIVNVYDLNDTEKLKAEIA  198 (289)
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcC--CCceeEEechhhhhHHHhhhc
Confidence            4578999999999 69999999999999995 99999997   66777777665442  245566789888777765544


Q ss_pred             HHhhcCCCeeEEEEcccCCC
Q 021391          101 EYNSQGRPLNILINNAGIMA  120 (313)
Q Consensus       101 ~~~~~~g~id~lv~~ag~~~  120 (313)
                             ..|+||||..+..
T Consensus       199 -------~~DilINaTp~Gm  211 (289)
T PRK12548        199 -------SSDILVNATLVGM  211 (289)
T ss_pred             -------cCCEEEEeCCCCC
Confidence                   4699999986543

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.80  E-value=1.7e-08  Score=94.45  Aligned_cols=80  Identities=23%  Similarity=0.256  Sum_probs=62.6

Q ss_pred             CCCCCCEEEEeCC----------------CCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEcc
Q 021391           25 IDGTGLTAIVTGA----------------SSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD   88 (313)
Q Consensus        25 ~~~~gk~~lItGa----------------s~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D   88 (313)
                      -+++||++|||||                ||++|+++|++|+++|++|++++++.+ .+         .+.   ....+|
T Consensus       184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~---------~~~---~~~~~d  250 (399)
T PRK05579        184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP---------TPA---GVKRID  250 (399)
T ss_pred             cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc---------CCC---CcEEEc
Confidence            3589999999999                455999999999999999999998752 11         111   134679


Q ss_pred             CCCHHHHHHHHHHHhhcCCCeeEEEEcccCCC
Q 021391           89 VSSLASVRKFASEYNSQGRPLNILINNAGIMA  120 (313)
Q Consensus        89 ~s~~~~v~~~~~~~~~~~g~id~lv~~ag~~~  120 (313)
                      +++.+++.+.+.   +.++++|++|||||+..
T Consensus       251 v~~~~~~~~~v~---~~~~~~DilI~~Aav~d  279 (399)
T PRK05579        251 VESAQEMLDAVL---AALPQADIFIMAAAVAD  279 (399)
T ss_pred             cCCHHHHHHHHH---HhcCCCCEEEEcccccc
Confidence            999888766665   44778999999999753

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.73  E-value=1.2e-07  Score=80.46  Aligned_cols=85  Identities=19%  Similarity=0.291  Sum_probs=69.4

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      ..++++++++|+||+|++|+++++.|+++|++|++++|+.++++...+.+....   ......+|..+.+++.+++.   
T Consensus        23 ~~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~---   96 (194)
T cd01078          23 GKDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF---GEGVGAVETSDDAARAAAIK---   96 (194)
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc---CCcEEEeeCCCHHHHHHHHh---
Confidence            567899999999999999999999999999999999999988888777765432   23456678888888766665   


Q ss_pred             hcCCCeeEEEEcccC
Q 021391          104 SQGRPLNILINNAGI  118 (313)
Q Consensus       104 ~~~g~id~lv~~ag~  118 (313)
                          +.|++|++...
T Consensus        97 ----~~diVi~at~~  107 (194)
T cd01078          97 ----GADVVFAAGAA  107 (194)
T ss_pred             ----cCCEEEECCCC
Confidence                57888887654

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.67  E-value=4.3e-07  Score=79.14  Aligned_cols=196  Identities=17%  Similarity=0.095  Sum_probs=113.9

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCeeE
Q 021391           32 AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNI  111 (313)
Q Consensus        32 ~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~id~  111 (313)
                      |+|+||+|.+|+.+++.|++.|++|.++.|+...  ...+++...    .++++.+|+.|.+++.++++       ++|.
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~~----g~~vv~~d~~~~~~l~~al~-------g~d~   67 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQAL----GAEVVEADYDDPESLVAALK-------GVDA   67 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHHT----TTEEEES-TT-HHHHHHHHT-------TCSE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhcc----cceEeecccCCHHHHHHHHc-------CCce
Confidence            6899999999999999999999999999999732  223334332    45678999999999988887       8999


Q ss_pred             EEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCCCC
Q 021391          112 LINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESA  191 (313)
Q Consensus       112 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~  191 (313)
                      ++++.+....              .-......+++++...-.+         ++| .||........          ...
T Consensus        68 v~~~~~~~~~--------------~~~~~~~~li~Aa~~agVk---------~~v-~ss~~~~~~~~----------~~~  113 (233)
T PF05368_consen   68 VFSVTPPSHP--------------SELEQQKNLIDAAKAAGVK---------HFV-PSSFGADYDES----------SGS  113 (233)
T ss_dssp             EEEESSCSCC--------------CHHHHHHHHHHHHHHHT-S---------EEE-ESEESSGTTTT----------TTS
T ss_pred             EEeecCcchh--------------hhhhhhhhHHHhhhccccc---------eEE-EEEeccccccc----------ccc
Confidence            9998875421              1122233455555544322         554 56654432110          000


Q ss_pred             CCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----hhH-----hHH-HHHHHhhc-CChH
Q 021391          192 YNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----ILR-----GFC-NTVGKLVL-KNIP  260 (313)
Q Consensus       192 ~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----~~~-----~~~-~~~~~~~~-~~~~  260 (313)
                      + +...+-..|..++.+.+..       +  +....|.||+..........    ...     .+. ..-..... .+.+
T Consensus       114 ~-p~~~~~~~k~~ie~~l~~~-------~--i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (233)
T PF05368_consen  114 E-PEIPHFDQKAEIEEYLRES-------G--IPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTR  183 (233)
T ss_dssp             T-THHHHHHHHHHHHHHHHHC-------T--SEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHH
T ss_pred             c-ccchhhhhhhhhhhhhhhc-------c--ccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHH
Confidence            1 1122334666655444433       5  88889999976432221110    000     000 00001123 3789


Q ss_pred             HHHHHHHHHHccCCccCCCceeecC
Q 021391          261 QGAATTCYVALHPQVQGVSGEYFSD  285 (313)
Q Consensus       261 eva~~~~~l~~~~~~~~~tG~~~~~  285 (313)
                      |+++.+..++.+ ...+-.|.++..
T Consensus       184 Dvg~~va~il~~-p~~~~~~~~~~~  207 (233)
T PF05368_consen  184 DVGRAVAAILLD-PEKHNNGKTIFL  207 (233)
T ss_dssp             HHHHHHHHHHHS-GGGTTEEEEEEE
T ss_pred             HHHHHHHHHHcC-hHHhcCCEEEEe
Confidence            999999999985 334335666553

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.56  E-value=6.3e-07  Score=78.28  Aligned_cols=147  Identities=20%  Similarity=0.104  Sum_probs=105.6

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      -+-++.|-++-|.||||.+|+-++.+|++.|-.|++-.|-.+..-...+-+   +.-+++.++..|+.|++||.++++  
T Consensus        55 GRsS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvm---GdLGQvl~~~fd~~DedSIr~vvk--  129 (391)
T KOG2865|consen   55 GRSSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVM---GDLGQVLFMKFDLRDEDSIRAVVK--  129 (391)
T ss_pred             CcccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeec---ccccceeeeccCCCCHHHHHHHHH--
Confidence            345578889999999999999999999999999999998544322222222   113479999999999999999998  


Q ss_pred             hhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          103 NSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                           .-.+|||..|--.+...      -...++|+.++-.+++.+..--.+         +.|.+|+..+...      
T Consensus       130 -----~sNVVINLIGrd~eTkn------f~f~Dvn~~~aerlAricke~GVe---------rfIhvS~Lganv~------  183 (391)
T KOG2865|consen  130 -----HSNVVINLIGRDYETKN------FSFEDVNVHIAERLARICKEAGVE---------RFIHVSCLGANVK------  183 (391)
T ss_pred             -----hCcEEEEeeccccccCC------cccccccchHHHHHHHHHHhhChh---------heeehhhcccccc------
Confidence                 45799999985322111      123468888888888887666555         8899988664322      


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHH
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKE  211 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~  211 (313)
                                 ..+-|--+|++-+-.+|.
T Consensus       184 -----------s~Sr~LrsK~~gE~aVrd  201 (391)
T KOG2865|consen  184 -----------SPSRMLRSKAAGEEAVRD  201 (391)
T ss_pred             -----------ChHHHHHhhhhhHHHHHh
Confidence                       234567777776665543

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.55  E-value=2.5e-07  Score=86.38  Aligned_cols=79  Identities=22%  Similarity=0.314  Sum_probs=61.7

Q ss_pred             CCCCCEEEEeCC---------------CCc-hHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccC
Q 021391           26 DGTGLTAIVTGA---------------SSG-IGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDV   89 (313)
Q Consensus        26 ~~~gk~~lItGa---------------s~g-iG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~   89 (313)
                      +++||++|||||               |+| +|.++|+.|+.+|++|++++++....          . ..  ....+|+
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~----------~-~~--~~~~~~v  248 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL----------T-PP--GVKSIKV  248 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC----------C-CC--CcEEEEe
Confidence            489999999999               667 99999999999999999988664321          1 11  2256899


Q ss_pred             CCHHHH-HHHHHHHhhcCCCeeEEEEcccCCC
Q 021391           90 SSLASV-RKFASEYNSQGRPLNILINNAGIMA  120 (313)
Q Consensus        90 s~~~~v-~~~~~~~~~~~g~id~lv~~ag~~~  120 (313)
                      ++.+++ ++++++.   .+.+|++|+|||+..
T Consensus       249 ~~~~~~~~~~~~~~---~~~~D~~i~~Aavsd  277 (390)
T TIGR00521       249 STAEEMLEAALNEL---AKDFDIFISAAAVAD  277 (390)
T ss_pred             ccHHHHHHHHHHhh---cccCCEEEEcccccc
Confidence            998888 6666443   467999999999863

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.49  E-value=2.6e-06  Score=75.60  Aligned_cols=133  Identities=21%  Similarity=0.102  Sum_probs=95.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      +.+|||||||.+|++++++|.++|++|.+..|+.++.....         ..+.+...|+.++.++...++       ++
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~---------~~v~~~~~d~~~~~~l~~a~~-------G~   64 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA---------GGVEVVLGDLRDPKSLVAGAK-------GV   64 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc---------CCcEEEEeccCCHhHHHHHhc-------cc
Confidence            47899999999999999999999999999999987766543         368899999999999888877       78


Q ss_pred             eEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCC
Q 021391          110 NILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDE  189 (313)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~  189 (313)
                      |.+++..+... +..       ........+.....++..    .      ....++.+|+..+...             
T Consensus        65 ~~~~~i~~~~~-~~~-------~~~~~~~~~~~~~a~~a~----~------~~~~~~~~s~~~~~~~-------------  113 (275)
T COG0702          65 DGVLLISGLLD-GSD-------AFRAVQVTAVVRAAEAAG----A------GVKHGVSLSVLGADAA-------------  113 (275)
T ss_pred             cEEEEEecccc-ccc-------chhHHHHHHHHHHHHHhc----C------CceEEEEeccCCCCCC-------------
Confidence            88888887542 111       223333444444444443    1      1235666666554432             


Q ss_pred             CCCCccccchHhHHHHHHHHHHHH
Q 021391          190 SAYNSFGAYGQSKLANILHAKELA  213 (313)
Q Consensus       190 ~~~~~~~~Y~asK~a~~~l~~~la  213 (313)
                          ....|..+|...+...++..
T Consensus       114 ----~~~~~~~~~~~~e~~l~~sg  133 (275)
T COG0702         114 ----SPSALARAKAAVEAALRSSG  133 (275)
T ss_pred             ----CccHHHHHHHHHHHHHHhcC
Confidence                33578999988888776644

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.44  E-value=1.9e-06  Score=72.89  Aligned_cols=148  Identities=16%  Similarity=0.112  Sum_probs=95.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC---EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           30 LTAIVTGASSGIGTETARVLALRGV---HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~---~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      |+++|||++|-+|++|.+.+.++|.   +.++.+.                       -.+|+++.+++++++++.    
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s-----------------------kd~DLt~~a~t~~lF~~e----   54 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS-----------------------KDADLTNLADTRALFESE----   54 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc-----------------------ccccccchHHHHHHHhcc----
Confidence            7899999999999999999999886   2333321                       257999999999999975    


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                       ++..|||.|.....-+ .+..--.+.+..|+.---++++.+..+-.+         ++|+..|.+-.... ...   .+
T Consensus        55 -kPthVIhlAAmVGGlf-~N~~ynldF~r~Nl~indNVlhsa~e~gv~---------K~vsclStCIfPdk-t~y---PI  119 (315)
T KOG1431|consen   55 -KPTHVIHLAAMVGGLF-HNNTYNLDFIRKNLQINDNVLHSAHEHGVK---------KVVSCLSTCIFPDK-TSY---PI  119 (315)
T ss_pred             -CCceeeehHhhhcchh-hcCCCchHHHhhcceechhHHHHHHHhchh---------hhhhhcceeecCCC-CCC---CC
Confidence             7888999987543311 111112223444444444556666666544         67777776643221 111   12


Q ss_pred             CC-----CCCCCccccchHhHHHHHHHHHHHHHHhccC
Q 021391          187 ND-----ESAYNSFGAYGQSKLANILHAKELAKHLKED  219 (313)
Q Consensus       187 ~~-----~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~  219 (313)
                      ++     --+-+....|+-+|..+.-..+.++.+++..
T Consensus       120 dEtmvh~gpphpsN~gYsyAKr~idv~n~aY~~qhg~~  157 (315)
T KOG1431|consen  120 DETMVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQHGRD  157 (315)
T ss_pred             CHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHhCCc
Confidence            21     1111134479999999988889988888753

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.34  E-value=1.9e-06  Score=74.96  Aligned_cols=97  Identities=16%  Similarity=0.262  Sum_probs=62.2

Q ss_pred             EEEEeCCCCc-hHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           31 TAIVTGASSG-IGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        31 ~~lItGas~g-iG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      +-.||..|+| ||+++|+.|+++|++|++++|+....        . .+..++.++.++  +   ..++.+.+.+.++.+
T Consensus        17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~--------~-~~~~~v~~i~v~--s---~~~m~~~l~~~~~~~   82 (229)
T PRK06732         17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK--------P-EPHPNLSIIEIE--N---VDDLLETLEPLVKDH   82 (229)
T ss_pred             ceeecCccchHHHHHHHHHHHhCCCEEEEEECccccc--------C-CCCCCeEEEEEe--c---HHHHHHHHHHHhcCC
Confidence            4567766665 99999999999999999998764210        0 011245555532  2   233333333444578


Q ss_pred             eEEEEcccCCCC-CC-ccCccchhhhhhhhhhHH
Q 021391          110 NILINNAGIMAS-PF-MLSKDNIELQFATNHLGH  141 (313)
Q Consensus       110 d~lv~~ag~~~~-~~-~~~~~~~~~~~~~n~~~~  141 (313)
                      |++|||||+... +. ..+.+++..++++|....
T Consensus        83 DivIh~AAvsd~~~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         83 DVLIHSMAVSDYTPVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             CEEEeCCccCCceehhhhhhhhhhhhhhhhhhhc
Confidence            999999998642 22 456777788877765543

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.33  E-value=2.4e-06  Score=79.20  Aligned_cols=77  Identities=27%  Similarity=0.457  Sum_probs=66.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC-CEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           30 LTAIVTGASSGIGTETARVLALRG-VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      +.+||.|| |++|+.+|..|+++| .+|++++|+.++++++.+..     ..++.++++|+.|.+.+.+++++       
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~-----~~~v~~~~vD~~d~~al~~li~~-------   68 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI-----GGKVEALQVDAADVDALVALIKD-------   68 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc-----cccceeEEecccChHHHHHHHhc-------
Confidence            67899999 999999999999999 79999999998888776543     34899999999999998888883       


Q ss_pred             eeEEEEcccCC
Q 021391          109 LNILINNAGIM  119 (313)
Q Consensus       109 id~lv~~ag~~  119 (313)
                      .|++||++...
T Consensus        69 ~d~VIn~~p~~   79 (389)
T COG1748          69 FDLVINAAPPF   79 (389)
T ss_pred             CCEEEEeCCch
Confidence            39999998753

>PLN00106 malate dehydrogenase

Probab=98.32  E-value=5.1e-06  Score=75.78  Aligned_cols=159  Identities=14%  Similarity=0.120  Sum_probs=99.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      .++|+|+|++|.+|..++..|+.++.  .+++++++..  +....++....+    .....++++.++....+       
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~--~g~a~Dl~~~~~----~~~i~~~~~~~d~~~~l-------   84 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANT--PGVAADVSHINT----PAQVRGFLGDDQLGDAL-------   84 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCC--CeeEchhhhCCc----CceEEEEeCCCCHHHHc-------
Confidence            46899999999999999999997765  7999999872  221223332211    11233444443333333       


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc----cccccCCCC
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH----RFAYSEGIR  182 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~----~~~~~~~~~  182 (313)
                      ...|++|++||....+    ...++..+..|+.....+.+.+.++        ..++.|+++|-..-    ....     
T Consensus        85 ~~aDiVVitAG~~~~~----g~~R~dll~~N~~i~~~i~~~i~~~--------~p~aivivvSNPvD~~~~i~t~-----  147 (323)
T PLN00106         85 KGADLVIIPAGVPRKP----GMTRDDLFNINAGIVKTLCEAVAKH--------CPNALVNIISNPVNSTVPIAAE-----  147 (323)
T ss_pred             CCCCEEEEeCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHH--------CCCeEEEEeCCCccccHHHHHH-----
Confidence            3789999999986442    2446777888887766655555444        22344444444332    1110     


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccC
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKED  219 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~  219 (313)
                        .+....++++...|+.++.-...|-..+|.+++-.
T Consensus       148 --~~~~~s~~p~~~viG~~~LDs~Rl~~~lA~~lgv~  182 (323)
T PLN00106        148 --VLKKAGVYDPKKLFGVTTLDVVRANTFVAEKKGLD  182 (323)
T ss_pred             --HHHHcCCCCcceEEEEecchHHHHHHHHHHHhCCC
Confidence              01123345567789999877778889999988743

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.27  E-value=6e-06  Score=77.92  Aligned_cols=188  Identities=18%  Similarity=0.187  Sum_probs=116.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcC---CEEEEEecCch--hHH---------HHHHHHHHhCCC--CceEEEEccCC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRG---VHVIMAVRNMA--AGK---------DVREAIVKEIPS--AKVDAMELDVS   90 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G---~~V~l~~r~~~--~~~---------~~~~~l~~~~~~--~~~~~~~~D~s   90 (313)
                      ++||+++||||||++|+-+...|+..-   .++++.-|...  ..+         .+.+.+.+..|.  .++..+..|++
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence            689999999999999999999999864   26888877432  111         222333333332  37888899998


Q ss_pred             CHHHHHHHHHHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECC
Q 021391           91 SLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSS  170 (313)
Q Consensus        91 ~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS  170 (313)
                      +++---..-+.- .....+|++||+|+...-     .|.++..+.+|++|+.++++.+....+-        -..|.+|.
T Consensus        90 ~~~LGis~~D~~-~l~~eV~ivih~AAtvrF-----de~l~~al~iNt~Gt~~~l~lak~~~~l--------~~~vhVST  155 (467)
T KOG1221|consen   90 EPDLGISESDLR-TLADEVNIVIHSAATVRF-----DEPLDVALGINTRGTRNVLQLAKEMVKL--------KALVHVST  155 (467)
T ss_pred             CcccCCChHHHH-HHHhcCCEEEEeeeeecc-----chhhhhhhhhhhHhHHHHHHHHHHhhhh--------heEEEeeh
Confidence            875211111111 112379999999986532     3567778999999999999988766543        26777877


Q ss_pred             ccccc--------cccCCC--CCCC---CCC-----------CCCCC-ccccchHhHHHHHHHHHHHHHHhccCCCcEEE
Q 021391          171 EAHRF--------AYSEGI--RFDK---IND-----------ESAYN-SFGAYGQSKLANILHAKELAKHLKEDGVNITA  225 (313)
Q Consensus       171 ~~~~~--------~~~~~~--~~~~---~~~-----------~~~~~-~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~v  225 (313)
                      ....-        +++...  ++.+   +++           ++..+ ....|.=+|+..+.+...-+..       +-+
T Consensus       156 Ay~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~-------lPi  228 (467)
T KOG1221|consen  156 AYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAEN-------LPL  228 (467)
T ss_pred             hheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccC-------CCe
Confidence            65431        111111  1211   110           11111 2346888887777766554433       455


Q ss_pred             EEeeCccccc
Q 021391          226 NSLHPGSIVT  235 (313)
Q Consensus       226 n~i~PG~v~t  235 (313)
                      ..|.|..|-.
T Consensus       229 vIiRPsiI~s  238 (467)
T KOG1221|consen  229 VIIRPSIITS  238 (467)
T ss_pred             EEEcCCceec
Confidence            6788877744

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.25  E-value=8.2e-06  Score=65.05  Aligned_cols=79  Identities=23%  Similarity=0.314  Sum_probs=59.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCE-EEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVH-VIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~-V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      ++++++++|.|| ||.|++++..|++.|++ |+++.|+.++++++.+.+    ++..+.++..  .+..   ....    
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~----~~~~~~~~~~--~~~~---~~~~----   74 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEF----GGVNIEAIPL--EDLE---EALQ----   74 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH----TGCSEEEEEG--GGHC---HHHH----
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc----CccccceeeH--HHHH---HHHh----
Confidence            689999999998 89999999999999995 999999999988887776    2234444444  2322   2333    


Q ss_pred             cCCCeeEEEEcccCCCC
Q 021391          105 QGRPLNILINNAGIMAS  121 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~  121 (313)
                         ..|++|++.+....
T Consensus        75 ---~~DivI~aT~~~~~   88 (135)
T PF01488_consen   75 ---EADIVINATPSGMP   88 (135)
T ss_dssp             ---TESEEEE-SSTTST
T ss_pred             ---hCCeEEEecCCCCc
Confidence               68999999976533

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK09620 hypothetical protein; Provisional

Probab=98.22  E-value=1.7e-06  Score=75.10  Aligned_cols=82  Identities=18%  Similarity=0.198  Sum_probs=51.5

Q ss_pred             CCCCEEEEeCCC----------------CchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCC
Q 021391           27 GTGLTAIVTGAS----------------SGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS   90 (313)
Q Consensus        27 ~~gk~~lItGas----------------~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s   90 (313)
                      |+||+||||+|.                |.+|+++|+.|+++|++|+++++........   +   .+......+..|..
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~---~---~~~~~~~~V~s~~d   74 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPND---I---NNQLELHPFEGIID   74 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcc---c---CCceeEEEEecHHH
Confidence            579999999886                9999999999999999999887642211100   0   00122333333222


Q ss_pred             CHHHHHHHHHHHhhcCCCeeEEEEcccCC
Q 021391           91 SLASVRKFASEYNSQGRPLNILINNAGIM  119 (313)
Q Consensus        91 ~~~~v~~~~~~~~~~~g~id~lv~~ag~~  119 (313)
                      ..+.+.++++    . ..+|++||+|++.
T Consensus        75 ~~~~l~~~~~----~-~~~D~VIH~AAvs   98 (229)
T PRK09620         75 LQDKMKSIIT----H-EKVDAVIMAAAGS   98 (229)
T ss_pred             HHHHHHHHhc----c-cCCCEEEECcccc
Confidence            2223333222    1 2689999999974

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.20  E-value=6.1e-06  Score=74.26  Aligned_cols=82  Identities=20%  Similarity=0.230  Sum_probs=71.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHH----cCCEEEEEecCchhHHHHHHHHHHhCCC--CceEEEEccCCCHHHHHHHHHHHhh
Q 021391           31 TAIVTGASSGIGTETARVLAL----RGVHVIMAVRNMAAGKDVREAIVKEIPS--AKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~----~G~~V~l~~r~~~~~~~~~~~l~~~~~~--~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      -++|-||||..|.-++.++..    +|..+.+.+||++++++..+.+.++.+.  .....+.+|.+|++++.+++++   
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~---   83 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQ---   83 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhh---
Confidence            379999999999999999999    7889999999999999999999887543  2344889999999999999995   


Q ss_pred             cCCCeeEEEEcccCC
Q 021391          105 QGRPLNILINNAGIM  119 (313)
Q Consensus       105 ~~g~id~lv~~ag~~  119 (313)
                          ..++|||+|..
T Consensus        84 ----~~vivN~vGPy   94 (423)
T KOG2733|consen   84 ----ARVIVNCVGPY   94 (423)
T ss_pred             ----hEEEEeccccc
Confidence                46999999965

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.18  E-value=6.7e-06  Score=77.27  Aligned_cols=76  Identities=32%  Similarity=0.478  Sum_probs=60.5

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           32 AIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        32 ~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      |+|.|| |.+|+.+++.|++++-  +|++.+|+.+++++..+++    ...++..+++|+.|.+++.++++       ..
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~l~~~~~-------~~   68 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL----LGDRVEAVQVDVNDPESLAELLR-------GC   68 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT------TTTTEEEEE--TTTHHHHHHHHT-------TS
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc----cccceeEEEEecCCHHHHHHHHh-------cC
Confidence            689999 9999999999999974  8999999999988877654    25689999999999999888877       56


Q ss_pred             eEEEEcccCC
Q 021391          110 NILINNAGIM  119 (313)
Q Consensus       110 d~lv~~ag~~  119 (313)
                      |+||||+|..
T Consensus        69 dvVin~~gp~   78 (386)
T PF03435_consen   69 DVVINCAGPF   78 (386)
T ss_dssp             SEEEE-SSGG
T ss_pred             CEEEECCccc
Confidence            9999999864

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.17  E-value=2.3e-05  Score=67.29  Aligned_cols=186  Identities=16%  Similarity=0.105  Sum_probs=124.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHH-HHHHHH---hCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDV-REAIVK---EIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~-~~~l~~---~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      -..|++||||-+|-=|.-++.-|+..|+.|..+-|........ .+.+..   .+.+......-.|++|...+.++++.+
T Consensus        26 r~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i  105 (376)
T KOG1372|consen   26 RPRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI  105 (376)
T ss_pred             ccceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc
Confidence            3457999999999999999999999999999998866554422 222211   123556788889999999999999987


Q ss_pred             hhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          103 NSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                           .++-+.|.|.....  ..+.|-.+-+-++...|++.++.++...-..       .+.-.+-.|.+-.++.-   .
T Consensus       106 -----kPtEiYnLaAQSHV--kvSFdlpeYTAeVdavGtLRlLdAi~~c~l~-------~~VrfYQAstSElyGkv---~  168 (376)
T KOG1372|consen  106 -----KPTEVYNLAAQSHV--KVSFDLPEYTAEVDAVGTLRLLDAIRACRLT-------EKVRFYQASTSELYGKV---Q  168 (376)
T ss_pred             -----Cchhhhhhhhhcce--EEEeecccceeeccchhhhhHHHHHHhcCcc-------cceeEEecccHhhcccc---c
Confidence                 78888888875432  3344555566788899999999988766443       12223444444444321   1


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHH---HHhccCCCcEEEEEeeCc
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELA---KHLKEDGVNITANSLHPG  231 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la---~e~~~~g~~I~vn~i~PG  231 (313)
                      .-...+.++|.+.++|+++|...-=.+-.+.   .-|+=.|  |-+|.=+|-
T Consensus       169 e~PQsE~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNG--ILFNHESPR  218 (376)
T KOG1372|consen  169 EIPQSETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNG--ILFNHESPR  218 (376)
T ss_pred             CCCcccCCCCCCCChhHHhhhhheEEEEEhHHhhcceeecc--EeecCCCCc
Confidence            1223456788889999999966332211111   1233345  777777774

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.17  E-value=8.6e-06  Score=78.09  Aligned_cols=78  Identities=17%  Similarity=0.210  Sum_probs=59.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc-hhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM-AAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      |++++|+++|+|+++ +|.++|+.|+++|++|++++++. +..++..+++.+.    .+.++..|..+.           
T Consensus         1 ~~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~-----------   64 (450)
T PRK14106          1 MELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGEL----GIELVLGEYPEE-----------   64 (450)
T ss_pred             CCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc----CCEEEeCCcchh-----------
Confidence            367899999999888 99999999999999999999975 3444444444322    355777887761           


Q ss_pred             hcCCCeeEEEEcccCC
Q 021391          104 SQGRPLNILINNAGIM  119 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~  119 (313)
                       ..+.+|+||+++|+.
T Consensus        65 -~~~~~d~vv~~~g~~   79 (450)
T PRK14106         65 -FLEGVDLVVVSPGVP   79 (450)
T ss_pred             -HhhcCCEEEECCCCC
Confidence             124789999999975

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.14  E-value=3e-05  Score=70.74  Aligned_cols=163  Identities=16%  Similarity=0.089  Sum_probs=96.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcC--CEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRG--VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      ++.++++|+|++|.||..++..|+.++  ..+++++++.  ++....++....  .  .....+.+|+.+..+.++    
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~--~~g~a~Dl~~~~--~--~~~v~~~td~~~~~~~l~----   75 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG--APGVAADLSHID--T--PAKVTGYADGELWEKALR----   75 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC--CcccccchhhcC--c--CceEEEecCCCchHHHhC----
Confidence            455799999999999999999999665  4799999943  222222333321  1  233445666444323333    


Q ss_pred             cCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCC
Q 021391          105 QGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFD  184 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  184 (313)
                         ..|++|+++|....+    .+.+...+..|+...-.+.+++.++-         .-++|+++|.....-.+.  ...
T Consensus        76 ---gaDvVVitaG~~~~~----~~tR~dll~~N~~i~~~i~~~i~~~~---------~~~iviv~SNPvdv~~~~--~~~  137 (321)
T PTZ00325         76 ---GADLVLICAGVPRKP----GMTRDDLFNTNAPIVRDLVAAVASSA---------PKAIVGIVSNPVNSTVPI--AAE  137 (321)
T ss_pred             ---CCCEEEECCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHHC---------CCeEEEEecCcHHHHHHH--HHh
Confidence               789999999975332    23466778888877666666665442         236777766433211110  000


Q ss_pred             CCCCCCCCCccccchHhHHHHHHHHHHHHHHhc
Q 021391          185 KINDESAYNSFGAYGQSKLANILHAKELAKHLK  217 (313)
Q Consensus       185 ~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~  217 (313)
                      .+....++++...|+.+-.=-..|-..+|..+.
T Consensus       138 ~~~~~sg~p~~~viG~g~LDs~R~r~~la~~l~  170 (321)
T PTZ00325        138 TLKKAGVYDPRKLFGVTTLDVVRARKFVAEALG  170 (321)
T ss_pred             hhhhccCCChhheeechhHHHHHHHHHHHHHhC
Confidence            112334455667788863222256666777765

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.14  E-value=0.00014  Score=59.85  Aligned_cols=196  Identities=16%  Similarity=0.082  Sum_probs=120.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      +.+-|.||||-.|..|+++..++|..|..+.||..+....          ..+..++.|+.|++++.+.+.       +.
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~----------~~~~i~q~Difd~~~~a~~l~-------g~   63 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR----------QGVTILQKDIFDLTSLASDLA-------GH   63 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc----------ccceeecccccChhhhHhhhc-------CC
Confidence            4678899999999999999999999999999998765432          246688999999998855555       78


Q ss_pred             eEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCC
Q 021391          110 NILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDE  189 (313)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~  189 (313)
                      |+||..-|...+..      ...    ..    .-.+++...++.     ....|+++++...+..-.+. ..+.   +.
T Consensus        64 DaVIsA~~~~~~~~------~~~----~~----k~~~~li~~l~~-----agv~RllVVGGAGSL~id~g-~rLv---D~  120 (211)
T COG2910          64 DAVISAFGAGASDN------DEL----HS----KSIEALIEALKG-----AGVPRLLVVGGAGSLEIDEG-TRLV---DT  120 (211)
T ss_pred             ceEEEeccCCCCCh------hHH----HH----HHHHHHHHHHhh-----cCCeeEEEEcCccceEEcCC-ceee---cC
Confidence            99999988653211      111    11    114555555554     34679999998877665543 2111   11


Q ss_pred             CCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchh--Hh-HHHHHHHhhcCChHHHHHHH
Q 021391          190 SAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGIL--RG-FCNTVGKLVLKNIPQGAATT  266 (313)
Q Consensus       190 ~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~--~~-~~~~~~~~~~~~~~eva~~~  266 (313)
                      -.| +...|..+++..+.    |..--.+.+  +...-++|..+..|..+...+.  .+ +...-......+.+|.|-++
T Consensus       121 p~f-P~ey~~~A~~~ae~----L~~Lr~~~~--l~WTfvSPaa~f~PGerTg~yrlggD~ll~n~~G~SrIS~aDYAiA~  193 (211)
T COG2910         121 PDF-PAEYKPEALAQAEF----LDSLRAEKS--LDWTFVSPAAFFEPGERTGNYRLGGDQLLVNAKGESRISYADYAIAV  193 (211)
T ss_pred             CCC-chhHHHHHHHHHHH----HHHHhhccC--cceEEeCcHHhcCCccccCceEeccceEEEcCCCceeeeHHHHHHHH
Confidence            112 22235555544333    222223333  6777899987766643332111  00 10000111245778888888


Q ss_pred             HHHHcc
Q 021391          267 CYVALH  272 (313)
Q Consensus       267 ~~l~~~  272 (313)
                      +.-+..
T Consensus       194 lDe~E~  199 (211)
T COG2910         194 LDELEK  199 (211)
T ss_pred             HHHHhc
Confidence            887763

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.05  E-value=1.4e-05  Score=81.29  Aligned_cols=161  Identities=16%  Similarity=0.159  Sum_probs=121.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchh--HH-HHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAA--GK-DVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~--~~-~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      ..|+.+|+||-||.|..+|..|.++|+ .++++.|+--+  -+ ......+..  +..+.+-..|++.......++++..
T Consensus      1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~--GVqV~vsT~nitt~~ga~~Li~~s~ 1844 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRR--GVQVQVSTSNITTAEGARGLIEESN 1844 (2376)
T ss_pred             ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhc--CeEEEEecccchhhhhHHHHHHHhh
Confidence            458999999999999999999999999 58888886422  11 122222333  5566666678888887788877653


Q ss_pred             hcCCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          104 SQGRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                       +.+.+..++|.|.+....+  +.+++.+++.-+-.+.++++|-+.-.+.-...       --+|.+||+..-++..   
T Consensus      1845 -kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~L-------dyFv~FSSvscGRGN~--- 1913 (2376)
T KOG1202|consen 1845 -KLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPEL-------DYFVVFSSVSCGRGNA--- 1913 (2376)
T ss_pred             -hcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCccc-------ceEEEEEeecccCCCC---
Confidence             4578999999998877654  67888999988888999888877665554331       2677788887666655   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHH
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELA  213 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la  213 (313)
                                  ++..|+-+..+++.+++.-.
T Consensus      1914 ------------GQtNYG~aNS~MERiceqRr 1933 (2376)
T KOG1202|consen 1914 ------------GQTNYGLANSAMERICEQRR 1933 (2376)
T ss_pred             ------------cccccchhhHHHHHHHHHhh
Confidence                        78899999999999988743

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.05  E-value=2e-05  Score=72.20  Aligned_cols=75  Identities=21%  Similarity=0.302  Sum_probs=54.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHc-CC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALR-GV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~-G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      .++++|+++||||+|.||+.++++|+++ |. +|+++.|+.+.+.+..+++.           ..|+.   ++++.+   
T Consensus       151 ~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~-----------~~~i~---~l~~~l---  213 (340)
T PRK14982        151 IDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELG-----------GGKIL---SLEEAL---  213 (340)
T ss_pred             cCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhc-----------cccHH---hHHHHH---
Confidence            4689999999999999999999999865 64 89999999777766554431           11222   222222   


Q ss_pred             hhcCCCeeEEEEcccCCC
Q 021391          103 NSQGRPLNILINNAGIMA  120 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~  120 (313)
                          ...|++|++++...
T Consensus       214 ----~~aDiVv~~ts~~~  227 (340)
T PRK14982        214 ----PEADIVVWVASMPK  227 (340)
T ss_pred             ----ccCCEEEECCcCCc
Confidence                36899999998643

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=98.02  E-value=1.5e-05  Score=67.93  Aligned_cols=168  Identities=15%  Similarity=0.152  Sum_probs=110.6

Q ss_pred             hhccCCCCCCCEEEEeCCCCchHHHHHHHHHHc-CC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHH
Q 021391           20 EVTQGIDGTGLTAIVTGASSGIGTETARVLALR-GV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRK   97 (313)
Q Consensus        20 ~~~~~~~~~gk~~lItGas~giG~aia~~La~~-G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~   97 (313)
                      +-....+-+-.++||||+-|-+|..+|..|-.+ |. .|++.+..... +.    ...     .--++-.|+-|.+.+++
T Consensus        35 FH~~s~~~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp-~~----V~~-----~GPyIy~DILD~K~L~e  104 (366)
T KOG2774|consen   35 FHTISQTQKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP-AN----VTD-----VGPYIYLDILDQKSLEE  104 (366)
T ss_pred             cccccccCCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc-hh----hcc-----cCCchhhhhhccccHHH
Confidence            334455667789999999999999999998865 65 57777643222 11    111     12256678888877766


Q ss_pred             HHHHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccc
Q 021391           98 FASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAY  177 (313)
Q Consensus        98 ~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~  177 (313)
                      .+-.     .+||-+||-....+.   ..+....-..++|..|..++++.+..+-          -+|.+-|.+.+..+.
T Consensus       105 IVVn-----~RIdWL~HfSALLSA---vGE~NVpLA~~VNI~GvHNil~vAa~~k----------L~iFVPSTIGAFGPt  166 (366)
T KOG2774|consen  105 IVVN-----KRIDWLVHFSALLSA---VGETNVPLALQVNIRGVHNILQVAAKHK----------LKVFVPSTIGAFGPT  166 (366)
T ss_pred             hhcc-----cccceeeeHHHHHHH---hcccCCceeeeecchhhhHHHHHHHHcC----------eeEeecccccccCCC
Confidence            6553     389999998764332   2234445567899999999999887653          345555555555443


Q ss_pred             cCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhcc
Q 021391          178 SEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKE  218 (313)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~  218 (313)
                      .+   -....+.+--.+...|+.||.-.+.+.+.+..+|+-
T Consensus       167 SP---RNPTPdltIQRPRTIYGVSKVHAEL~GEy~~hrFg~  204 (366)
T KOG2774|consen  167 SP---RNPTPDLTIQRPRTIYGVSKVHAELLGEYFNHRFGV  204 (366)
T ss_pred             CC---CCCCCCeeeecCceeechhHHHHHHHHHHHHhhcCc
Confidence            21   111112222335678999999999999999888873

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.94  E-value=3e-05  Score=71.10  Aligned_cols=120  Identities=14%  Similarity=0.068  Sum_probs=69.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC-------CEEEEEecCch--hHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHH
Q 021391           30 LTAIVTGASSGIGTETARVLALRG-------VHVIMAVRNMA--AGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFAS  100 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G-------~~V~l~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~  100 (313)
                      -+++||||+|.+|.+++..|+..+       ..|++.+++..  .++....++...    .. ....|+....+..+   
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~----~~-~~~~~~~~~~~~~~---   74 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDC----AF-PLLKSVVATTDPEE---   74 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhc----cc-cccCCceecCCHHH---
Confidence            358999999999999999999854       58999999653  122211111110    00 01113322222222   


Q ss_pred             HHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391          101 EYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus       101 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                          .+...|+|||+||....+.    +.-...++.|+.    +++.+.+.+.+.+   ..++.+|++|...
T Consensus        75 ----~l~~aDiVI~tAG~~~~~~----~~R~~l~~~N~~----i~~~i~~~i~~~~---~~~~iiivvsNPv  131 (325)
T cd01336          75 ----AFKDVDVAILVGAMPRKEG----MERKDLLKANVK----IFKEQGEALDKYA---KKNVKVLVVGNPA  131 (325)
T ss_pred             ----HhCCCCEEEEeCCcCCCCC----CCHHHHHHHHHH----HHHHHHHHHHHhC---CCCeEEEEecCcH
Confidence                2347999999999864421    222455666654    4556666666642   1367788887644

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.83  E-value=0.00039  Score=62.65  Aligned_cols=148  Identities=20%  Similarity=0.281  Sum_probs=86.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      .+|++++|+|+++++|.++++.+...|.+|++++++.++.+.+. ++     +..   ..+|..+.+..+.+.+..  ..
T Consensus       143 ~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~-----g~~---~~~~~~~~~~~~~~~~~~--~~  211 (325)
T cd08253         143 KAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QA-----GAD---AVFNYRAEDLADRILAAT--AG  211 (325)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc-----CCC---EEEeCCCcCHHHHHHHHc--CC
Confidence            36899999999999999999999999999999999876654432 21     221   124445544444433322  12


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCC-
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDK-  185 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~-  185 (313)
                      .++|++++++|..         ..               ......+       ...|+++.+++....    ....+.. 
T Consensus       212 ~~~d~vi~~~~~~---------~~---------------~~~~~~l-------~~~g~~v~~~~~~~~----~~~~~~~~  256 (325)
T cd08253         212 QGVDVIIEVLANV---------NL---------------AKDLDVL-------APGGRIVVYGSGGLR----GTIPINPL  256 (325)
T ss_pred             CceEEEEECCchH---------HH---------------HHHHHhh-------CCCCEEEEEeecCCc----CCCChhHH
Confidence            3699999998631         00               1111222       236899988764310    0111111 


Q ss_pred             CCCCCCCCccccchHhHHHHHHHHHHHHHHhccCC
Q 021391          186 INDESAYNSFGAYGQSKLANILHAKELAKHLKEDG  220 (313)
Q Consensus       186 ~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g  220 (313)
                      +.....+.....|..+|.....+.+.+...+....
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (325)
T cd08253         257 MAKEASIRGVLLYTATPEERAAAAEAIAAGLADGA  291 (325)
T ss_pred             HhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCC
Confidence            11111222333567777777777777766665544

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.77  E-value=0.0012  Score=52.94  Aligned_cols=117  Identities=14%  Similarity=0.208  Sum_probs=76.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHhCCC--CceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           30 LTAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKEIPS--AKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~--~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      .++.|+||+|.+|.+++..|+..+.  .+++.+++.+.++....++....+.  .......   .+.+.           
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~~-----------   66 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYEA-----------   66 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGGG-----------
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---ccccc-----------
Confidence            3689999999999999999999976  6999999988888777777654211  2222322   22222           


Q ss_pred             CCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391          106 GRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                      ....|++|.++|....+.    +.-.+.++.|..    +.+.+.+.+.+.    .+++.++++|...
T Consensus        67 ~~~aDivvitag~~~~~g----~sR~~ll~~N~~----i~~~~~~~i~~~----~p~~~vivvtNPv  121 (141)
T PF00056_consen   67 LKDADIVVITAGVPRKPG----MSRLDLLEANAK----IVKEIAKKIAKY----APDAIVIVVTNPV  121 (141)
T ss_dssp             GTTESEEEETTSTSSSTT----SSHHHHHHHHHH----HHHHHHHHHHHH----STTSEEEE-SSSH
T ss_pred             cccccEEEEecccccccc----ccHHHHHHHhHh----HHHHHHHHHHHh----CCccEEEEeCCcH
Confidence            236899999999754322    223444555554    455555555554    3467788777644

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.77  E-value=0.00015  Score=58.88  Aligned_cols=79  Identities=20%  Similarity=0.327  Sum_probs=57.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcC-CEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRG-VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      ..++++++++|+|+ |++|+++++.|++.| .+|++++|+.+..++..+++...       .+..+.++..+.       
T Consensus        14 ~~~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~-------~~~~~~~~~~~~-------   78 (155)
T cd01065          14 GIELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGEL-------GIAIAYLDLEEL-------   78 (155)
T ss_pred             CCCCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc-------ccceeecchhhc-------
Confidence            34578899999998 899999999999996 68999999988877766655321       022334443322       


Q ss_pred             hhcCCCeeEEEEcccCCC
Q 021391          103 NSQGRPLNILINNAGIMA  120 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~  120 (313)
                         ....|++|++.+...
T Consensus        79 ---~~~~Dvvi~~~~~~~   93 (155)
T cd01065          79 ---LAEADLIINTTPVGM   93 (155)
T ss_pred             ---cccCCEEEeCcCCCC
Confidence               236899999997543

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=97.76  E-value=0.00013  Score=59.60  Aligned_cols=161  Identities=18%  Similarity=0.106  Sum_probs=100.6

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFAS  100 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~  100 (313)
                      .++.|+++.++|.||||-.|..+.+++++.+-  +|+++.|...-...+         ...+.-...|++..++.     
T Consensus        12 EDf~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at---------~k~v~q~~vDf~Kl~~~-----   77 (238)
T KOG4039|consen   12 EDFRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT---------DKVVAQVEVDFSKLSQL-----   77 (238)
T ss_pred             HHHhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc---------cceeeeEEechHHHHHH-----
Confidence            34778999999999999999999999999874  799999875322221         34566677787765543     


Q ss_pred             HHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          101 EYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       101 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                        ...+.++|+++++.|.......  .|++.+.   .---.+.+.+++     |.    +....++.+||..+...    
T Consensus        78 --a~~~qg~dV~FcaLgTTRgkaG--adgfykv---DhDyvl~~A~~A-----Ke----~Gck~fvLvSS~GAd~s----  137 (238)
T KOG4039|consen   78 --ATNEQGPDVLFCALGTTRGKAG--ADGFYKV---DHDYVLQLAQAA-----KE----KGCKTFVLVSSAGADPS----  137 (238)
T ss_pred             --HhhhcCCceEEEeecccccccc--cCceEee---chHHHHHHHHHH-----Hh----CCCeEEEEEeccCCCcc----
Confidence              2233489999999987543221  2333322   111111222222     21    33558888998776533    


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCc
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLF  238 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~  238 (313)
                                   ....|--.|.=++.-+..    +.-+    ++..+.||++.....
T Consensus       138 -------------SrFlY~k~KGEvE~~v~e----L~F~----~~~i~RPG~ll~~R~  174 (238)
T KOG4039|consen  138 -------------SRFLYMKMKGEVERDVIE----LDFK----HIIILRPGPLLGERT  174 (238)
T ss_pred             -------------cceeeeeccchhhhhhhh----cccc----EEEEecCcceecccc
Confidence                         234677778666654333    2221    456799999965543

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.70  E-value=0.00026  Score=63.25  Aligned_cols=77  Identities=18%  Similarity=0.287  Sum_probs=56.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      ...++|+++|+|+ ||+|++++..|++.|++|.+++|+.++.++..+.+...  + .......|     +   .      
T Consensus       113 ~~~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~--~-~~~~~~~~-----~---~------  174 (270)
T TIGR00507       113 PLRPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRY--G-EIQAFSMD-----E---L------  174 (270)
T ss_pred             CCccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhc--C-ceEEechh-----h---h------
Confidence            3457899999999 69999999999999999999999988888777765432  1 12222111     1   0      


Q ss_pred             cCCCeeEEEEcccCC
Q 021391          105 QGRPLNILINNAGIM  119 (313)
Q Consensus       105 ~~g~id~lv~~ag~~  119 (313)
                      .....|++||+.+..
T Consensus       175 ~~~~~DivInatp~g  189 (270)
T TIGR00507       175 PLHRVDLIINATSAG  189 (270)
T ss_pred             cccCccEEEECCCCC
Confidence            123589999999864

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.69  E-value=0.00021  Score=64.14  Aligned_cols=50  Identities=18%  Similarity=0.302  Sum_probs=43.7

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcC-CEEEEEecCchhHHHHHHHHH
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRG-VHVIMAVRNMAAGKDVREAIV   74 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G-~~V~l~~r~~~~~~~~~~~l~   74 (313)
                      ..++++|+++|+|+ ||+|++++..|++.| .+|++++|+.++.+++.+.+.
T Consensus       118 ~~~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~  168 (278)
T PRK00258        118 GVDLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG  168 (278)
T ss_pred             CCCCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence            34688999999997 899999999999999 689999999988887776653

>cd00704 MDH Malate dehydrogenase

Probab=97.67  E-value=0.00029  Score=64.45  Aligned_cols=117  Identities=13%  Similarity=0.100  Sum_probs=70.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-------EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHH----HHH
Q 021391           31 TAIVTGASSGIGTETARVLALRGV-------HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVR----KFA   99 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G~-------~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~----~~~   99 (313)
                      ++.||||+|.+|..++..|+..|.       .++|.+++...              ........|+.+.....    ..-
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~--------------~~~~g~~~Dl~d~~~~~~~~~~i~   67 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM--------------KALEGVVMELQDCAFPLLKGVVIT   67 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc--------------CccceeeeehhhhcccccCCcEEe
Confidence            589999999999999999998764       49999987520              12233445555442000    000


Q ss_pred             HHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391          100 SEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus       100 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                      ....+.+...|++|++||....+.    +.-.+.+..|+    .+.+.+.+.+.+.+   ++++.+|++|-..
T Consensus        68 ~~~~~~~~~aDiVVitAG~~~~~g----~tR~dll~~N~----~i~~~i~~~i~~~~---~~~~iiivvsNPv  129 (323)
T cd00704          68 TDPEEAFKDVDVAILVGAFPRKPG----MERADLLRKNA----KIFKEQGEALNKVA---KPTVKVLVVGNPA  129 (323)
T ss_pred             cChHHHhCCCCEEEEeCCCCCCcC----CcHHHHHHHhH----HHHHHHHHHHHHhC---CCCeEEEEeCCcH
Confidence            111223457999999999754432    22334455554    45666666666642   1467788877543

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.65  E-value=0.00012  Score=70.20  Aligned_cols=81  Identities=14%  Similarity=0.219  Sum_probs=55.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      |+++||+++|||+++ +|.++|+.|++.|++|++.+++........+.+...  +  +.+....  +...+   .+    
T Consensus         1 ~~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~--g--~~~~~~~--~~~~~---~~----   66 (447)
T PRK02472          1 TEYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEE--G--IKVICGS--HPLEL---LD----   66 (447)
T ss_pred             CCcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhc--C--CEEEeCC--CCHHH---hc----
Confidence            457899999999986 999999999999999999998765444444444432  2  2222211  11111   11    


Q ss_pred             cCCCeeEEEEcccCCCC
Q 021391          105 QGRPLNILINNAGIMAS  121 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~  121 (313)
                        ..+|+||+++|+...
T Consensus        67 --~~~d~vV~s~gi~~~   81 (447)
T PRK02472         67 --EDFDLMVKNPGIPYT   81 (447)
T ss_pred             --CcCCEEEECCCCCCC
Confidence              148999999998643

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.64  E-value=0.0011  Score=60.35  Aligned_cols=80  Identities=23%  Similarity=0.356  Sum_probs=57.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      ..|++++|+|+++++|.++++.+...|++|++++++.+..+.+ ..+     +..   ...|..+.+....+.+...  .
T Consensus       165 ~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~-----~~~---~~~~~~~~~~~~~~~~~~~--~  233 (342)
T cd08266         165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KEL-----GAD---YVIDYRKEDFVREVRELTG--K  233 (342)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCC---eEEecCChHHHHHHHHHhC--C
Confidence            3678999999999999999999999999999999887665433 111     211   2246666555555544332  2


Q ss_pred             CCeeEEEEccc
Q 021391          107 RPLNILINNAG  117 (313)
Q Consensus       107 g~id~lv~~ag  117 (313)
                      +++|++++++|
T Consensus       234 ~~~d~~i~~~g  244 (342)
T cd08266         234 RGVDVVVEHVG  244 (342)
T ss_pred             CCCcEEEECCc
Confidence            36999999997

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.61  E-value=0.00052  Score=63.24  Aligned_cols=83  Identities=16%  Similarity=0.308  Sum_probs=64.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCc---------------------hhHHHHHHHHHHhCCCCceE
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNM---------------------AAGKDVREAIVKEIPSAKVD   83 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~---------------------~~~~~~~~~l~~~~~~~~~~   83 (313)
                      .+++++|+|.|+ ||+|..+++.|+..|. ++.+++++.                     .+.+.+.+.+.+.+|..+++
T Consensus        21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~   99 (338)
T PRK12475         21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV   99 (338)
T ss_pred             hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence            367899999997 6899999999999998 899999874                     35666677777777888888


Q ss_pred             EEEccCCCHHHHHHHHHHHhhcCCCeeEEEEccc
Q 021391           84 AMELDVSSLASVRKFASEYNSQGRPLNILINNAG  117 (313)
Q Consensus        84 ~~~~D~s~~~~v~~~~~~~~~~~g~id~lv~~ag  117 (313)
                      .+..|++. +.++.+++       ..|++|.+..
T Consensus       100 ~~~~~~~~-~~~~~~~~-------~~DlVid~~D  125 (338)
T PRK12475        100 PVVTDVTV-EELEELVK-------EVDLIIDATD  125 (338)
T ss_pred             EEeccCCH-HHHHHHhc-------CCCEEEEcCC
Confidence            88888863 34444433       5799988873

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.58  E-value=0.00031  Score=59.00  Aligned_cols=77  Identities=21%  Similarity=0.200  Sum_probs=48.0

Q ss_pred             CCCCEEEEeCC----------------CCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCC
Q 021391           27 GTGLTAIVTGA----------------SSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS   90 (313)
Q Consensus        27 ~~gk~~lItGa----------------s~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s   90 (313)
                      |+||+||||+|                ||-+|.++|+.++.+|++|+++..... ...          ...+  -..++.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~----------p~~~--~~i~v~   67 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP----------PPGV--KVIRVE   67 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS---------------TTE--EEEE-S
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc----------cccc--eEEEec
Confidence            58999999987                478999999999999999999986632 110          1233  344466


Q ss_pred             CHHHHHHHHHHHhhcCCCeeEEEEcccCC
Q 021391           91 SLASVRKFASEYNSQGRPLNILINNAGIM  119 (313)
Q Consensus        91 ~~~~v~~~~~~~~~~~g~id~lv~~ag~~  119 (313)
                      +.+++...+.+..   ...|++|++|.+.
T Consensus        68 sa~em~~~~~~~~---~~~Di~I~aAAVs   93 (185)
T PF04127_consen   68 SAEEMLEAVKELL---PSADIIIMAAAVS   93 (185)
T ss_dssp             SHHHHHHHHHHHG---GGGSEEEE-SB--
T ss_pred             chhhhhhhhcccc---CcceeEEEecchh
Confidence            6666655555543   3459999999875

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.53  E-value=0.0015  Score=59.49  Aligned_cols=117  Identities=14%  Similarity=0.191  Sum_probs=76.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC--CEEEEEecCchhHHHHHHHHHHhCC--CCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           30 LTAIVTGASSGIGTETARVLALRG--VHVIMAVRNMAAGKDVREAIVKEIP--SAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G--~~V~l~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      +++.|.|+ |++|++++..|+..|  ..|++++++.++++....++.....  +.......   .+.+.           
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~~~-----------   65 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDYSD-----------   65 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCHHH-----------
Confidence            36888896 899999999999999  4799999999988888877765421  11222221   22211           


Q ss_pred             CCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          106 GRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                      ....|++|+++|....+.    +.-...+..|.    .+++...+.+.+.    ..++.++++|-...
T Consensus        66 l~~aDIVIitag~~~~~g----~~R~dll~~N~----~i~~~~~~~i~~~----~~~~~vivvsNP~d  121 (306)
T cd05291          66 CKDADIVVITAGAPQKPG----ETRLDLLEKNA----KIMKSIVPKIKAS----GFDGIFLVASNPVD  121 (306)
T ss_pred             hCCCCEEEEccCCCCCCC----CCHHHHHHHHH----HHHHHHHHHHHHh----CCCeEEEEecChHH
Confidence            136899999999754432    12223344444    3555556666654    34678888886553

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.52  E-value=0.00056  Score=62.67  Aligned_cols=117  Identities=13%  Similarity=0.071  Sum_probs=73.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-------EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHH--HH--
Q 021391           31 TAIVTGASSGIGTETARVLALRGV-------HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRK--FA--   99 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G~-------~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~--~~--   99 (313)
                      ++.|+||+|.+|.+++..|+..|.       .++|.++++..              ........|++|......  ..  
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~--------------~~a~g~~~Dl~d~~~~~~~~~~~~   66 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAM--------------KVLEGVVMELMDCAFPLLDGVVPT   66 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcc--------------cccceeEeehhcccchhcCceecc
Confidence            478999999999999999998664       49999986432              123445666666541110  00  


Q ss_pred             HHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391          100 SEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus       100 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                      ....+.+...|++|++||....+    .+.....+..|+.    +++.+.+.+.+.+   ++++.||++|...
T Consensus        67 ~~~~~~~~~aDiVVitAG~~~~~----~~tr~~ll~~N~~----i~k~i~~~i~~~~---~~~~iiivvsNPv  128 (324)
T TIGR01758        67 HDPAVAFTDVDVAILVGAFPRKE----GMERRDLLSKNVK----IFKEQGRALDKLA---KKDCKVLVVGNPA  128 (324)
T ss_pred             CChHHHhCCCCEEEEcCCCCCCC----CCcHHHHHHHHHH----HHHHHHHHHHhhC---CCCeEEEEeCCcH
Confidence            01123345799999999975332    2234555666654    5566666666631   1367888887644

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.49  E-value=0.00028  Score=63.25  Aligned_cols=122  Identities=19%  Similarity=0.210  Sum_probs=82.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      ..++|.||+|..|.-++++|+.+|.+-.+.+||..++..+..+|     +..+..+.+.  +++.++++++       +.
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L-----G~~~~~~p~~--~p~~~~~~~~-------~~   72 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL-----GPEAAVFPLG--VPAALEAMAS-------RT   72 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc-----CccccccCCC--CHHHHHHHHh-------cc
Confidence            56899999999999999999999999999999999999888877     3333334444  4777777776       67


Q ss_pred             eEEEEcccCCCCCCc-------cCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391          110 NILINNAGIMASPFM-------LSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus       110 d~lv~~ag~~~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                      ++|+||+|......+       ..-.++     +.+.|-+.+.+.......+.+.  ..+.+||.-....
T Consensus        73 ~VVlncvGPyt~~g~plv~aC~~~GTdY-----~DiTGEi~~fe~~i~~yh~~A~--~~Ga~Ii~~cGFD  135 (382)
T COG3268          73 QVVLNCVGPYTRYGEPLVAACAAAGTDY-----ADITGEIMFFENSIDLYHAQAA--DAGARIIPGCGFD  135 (382)
T ss_pred             eEEEeccccccccccHHHHHHHHhCCCe-----eeccccHHHHHHHHHHHHHHHH--hcCCEEeccCCCC
Confidence            899999997643110       000111     1234555556666555444321  3466777655433

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.48  E-value=0.0012  Score=60.75  Aligned_cols=81  Identities=19%  Similarity=0.291  Sum_probs=54.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      -.|.++||+||++++|..+++.+...|++|+.++++.++.+.+.+.+     +.. .+  .|..+.+...+.+.+.. . 
T Consensus       150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l-----Ga~-~v--i~~~~~~~~~~~i~~~~-~-  219 (338)
T cd08295         150 KKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL-----GFD-DA--FNYKEEPDLDAALKRYF-P-  219 (338)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc-----CCc-ee--EEcCCcccHHHHHHHhC-C-
Confidence            46899999999999999999888889999999998877655544323     221 11  23222222333333332 1 


Q ss_pred             CCeeEEEEccc
Q 021391          107 RPLNILINNAG  117 (313)
Q Consensus       107 g~id~lv~~ag  117 (313)
                      +++|+++.+.|
T Consensus       220 ~gvd~v~d~~g  230 (338)
T cd08295         220 NGIDIYFDNVG  230 (338)
T ss_pred             CCcEEEEECCC
Confidence            47999999887

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.46  E-value=0.00091  Score=61.41  Aligned_cols=77  Identities=17%  Similarity=0.323  Sum_probs=52.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC-C
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG-R  107 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~-g  107 (313)
                      |.++||+||+||+|...++-....|++++++..+.++.+ ..+++     +..   ...|..+.+    +.+++.+.. |
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~l-----GAd---~vi~y~~~~----~~~~v~~~t~g  209 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKEL-----GAD---HVINYREED----FVEQVRELTGG  209 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhc-----CCC---EEEcCCccc----HHHHHHHHcCC
Confidence            899999999999999999888889987777776666655 44433     221   122333433    344444333 2


Q ss_pred             -CeeEEEEcccC
Q 021391          108 -PLNILINNAGI  118 (313)
Q Consensus       108 -~id~lv~~ag~  118 (313)
                       ++|+++...|.
T Consensus       210 ~gvDvv~D~vG~  221 (326)
T COG0604         210 KGVDVVLDTVGG  221 (326)
T ss_pred             CCceEEEECCCH
Confidence             69999999984

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.44  E-value=0.0032  Score=57.51  Aligned_cols=121  Identities=11%  Similarity=0.169  Sum_probs=79.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHhCCC-CceEEEEccCCCHHHHHHHHHHH
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKEIPS-AKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      .-.++++.|+|+ |++|.+++..|+..|.  .+++.+++.+.++....++....+- .++....   .+.   +.     
T Consensus         3 ~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~---~~~---~~-----   70 (315)
T PRK00066          3 KKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYA---GDY---SD-----   70 (315)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEe---CCH---HH-----
Confidence            346789999998 9999999999999987  7999999998888888777765321 1222221   121   11     


Q ss_pred             hhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          103 NSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                         +..-|++|.++|....+.    ..-...++.|..    +++.+.+.+.+.    ..++.++++|-...
T Consensus        71 ---~~~adivIitag~~~k~g----~~R~dll~~N~~----i~~~i~~~i~~~----~~~~~vivvsNP~d  126 (315)
T PRK00066         71 ---CKDADLVVITAGAPQKPG----ETRLDLVEKNLK----IFKSIVGEVMAS----GFDGIFLVASNPVD  126 (315)
T ss_pred             ---hCCCCEEEEecCCCCCCC----CCHHHHHHHHHH----HHHHHHHHHHHh----CCCeEEEEccCcHH
Confidence               236899999999854432    122344455544    444445555553    34678888886553

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.44  E-value=0.0024  Score=72.36  Aligned_cols=186  Identities=16%  Similarity=0.114  Sum_probs=114.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      .+.|+.++|++.+++++.+++.+|.++|..|+++..... .......+     +..+-.+.+.-.+..++..+++.+...
T Consensus      1752 ~~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1825 (2582)
T TIGR02813      1752 KQSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWV-VSHSASPL-----ASAIASVTLGTIDDTSIEAVIKDIEEK 1825 (2582)
T ss_pred             cccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeecccc-cccccccc-----ccccccccccccchHHHHHHHHhhhcc
Confidence            456888999988999999999999999999887742211 00000000     112223455555667788888888777


Q ss_pred             CCCeeEEEEcccCCCCCCc-cCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCC
Q 021391          106 GRPLNILINNAGIMASPFM-LSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFD  184 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  184 (313)
                      .+.++.+||..+......+ .+...+...-...+...|.+.|.+.+.+..     ...+.++.++...|..+.....   
T Consensus      1826 ~~~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~-----~~~~~~~~vsr~~G~~g~~~~~--- 1897 (2582)
T TIGR02813      1826 TAQIDGFIHLQPQHKSVADKVDAIELPEAAKQSLMLAFLFAKLLNVKLAT-----NARASFVTVSRIDGGFGYSNGD--- 1897 (2582)
T ss_pred             ccccceEEEeccccccccccccccccchhhHHHHHHHHHHHHhhchhhcc-----CCCeEEEEEEecCCccccCCcc---
Confidence            8899999998875432111 011111222224455667788877666554     3356788888877655432110   


Q ss_pred             CCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCc
Q 021391          185 KINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPG  231 (313)
Q Consensus       185 ~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG  231 (313)
                         ...+.... --....+++.+|+|+++.|+...-  .|...+.|.
T Consensus      1898 ---~~~~~~~~-~~~~~~a~l~Gl~Ktl~~E~P~~~--~r~vDl~~~ 1938 (2582)
T TIGR02813      1898 ---ADSGTQQV-KAELNQAALAGLTKTLNHEWNAVF--CRALDLAPK 1938 (2582)
T ss_pred             ---cccccccc-ccchhhhhHHHHHHhHHHHCCCCe--EEEEeCCCC
Confidence               00000000 013357899999999999999766  888888775

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.43  E-value=0.00092  Score=60.14  Aligned_cols=52  Identities=19%  Similarity=0.232  Sum_probs=45.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhC
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEI   77 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~   77 (313)
                      .++.+|+++|.|+ ||.|++++..|++.|+ +|++++|+.++.+.+.+.+...+
T Consensus       123 ~~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~  175 (284)
T PRK12549        123 PDASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARF  175 (284)
T ss_pred             cCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhC
Confidence            3578899999998 6799999999999998 79999999999998888776554

>PRK05086 malate dehydrogenase; Provisional

Probab=97.42  E-value=0.003  Score=57.66  Aligned_cols=105  Identities=17%  Similarity=0.101  Sum_probs=57.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHH-c--CCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           30 LTAIVTGASSGIGTETARVLAL-R--GVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~-~--G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      ++++|.||+|++|.+++..|+. .  +..+++.+|+.. .+...-.+...  +.......++-.+   +...       .
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~--~~~~~i~~~~~~d---~~~~-------l   67 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHI--PTAVKIKGFSGED---PTPA-------L   67 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcC--CCCceEEEeCCCC---HHHH-------c
Confidence            5789999999999999998865 2  347888888743 21111122110  1011111112122   1111       2


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHH
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDT  151 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  151 (313)
                      ...|++|.++|....+.    ..-...+..|....-.+.+.+.++
T Consensus        68 ~~~DiVIitaG~~~~~~----~~R~dll~~N~~i~~~ii~~i~~~  108 (312)
T PRK05086         68 EGADVVLISAGVARKPG----MDRSDLFNVNAGIVKNLVEKVAKT  108 (312)
T ss_pred             CCCCEEEEcCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHh
Confidence            36999999999754432    223445666665555554444433

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.42  E-value=0.0014  Score=58.81  Aligned_cols=82  Identities=16%  Similarity=0.263  Sum_probs=57.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      ++++|+++|.|| ||-|++++..|++.|+ +|+++.|+.++.+++.+.+...++...+  ...+.   .......     
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~--~~~~~---~~~~~~~-----  192 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAV--VGVDA---RGIEDVI-----  192 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceE--EecCH---hHHHHHH-----
Confidence            467899999998 8899999999999998 7999999999988887776543322111  12232   1121112     


Q ss_pred             cCCCeeEEEEcccCCC
Q 021391          105 QGRPLNILINNAGIMA  120 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~  120 (313)
                        ...|+|||+..+..
T Consensus       193 --~~~divINaTp~Gm  206 (283)
T PRK14027        193 --AAADGVVNATPMGM  206 (283)
T ss_pred             --hhcCEEEEcCCCCC
Confidence              24799999986543

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.42  E-value=0.0013  Score=56.04  Aligned_cols=83  Identities=13%  Similarity=0.244  Sum_probs=61.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecC-------------------chhHHHHHHHHHHhCCCCceEEE
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRN-------------------MAAGKDVREAIVKEIPSAKVDAM   85 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~   85 (313)
                      .+++++|+|.| .||+|..+++.|+..|. ++.+++++                   ..+.+.+.+.+.+.+|..++..+
T Consensus        18 kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~   96 (202)
T TIGR02356        18 RLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTAL   96 (202)
T ss_pred             HhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            46889999998 57999999999999998 89999987                   34566666777777776666666


Q ss_pred             EccCCCHHHHHHHHHHHhhcCCCeeEEEEccc
Q 021391           86 ELDVSSLASVRKFASEYNSQGRPLNILINNAG  117 (313)
Q Consensus        86 ~~D~s~~~~v~~~~~~~~~~~g~id~lv~~ag  117 (313)
                      ..++.+ +.+..+++       ..|++|.+..
T Consensus        97 ~~~i~~-~~~~~~~~-------~~D~Vi~~~d  120 (202)
T TIGR02356        97 KERVTA-ENLELLIN-------NVDLVLDCTD  120 (202)
T ss_pred             hhcCCH-HHHHHHHh-------CCCEEEECCC
Confidence            666643 33444333       6788888763

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.41  E-value=0.0015  Score=59.62  Aligned_cols=79  Identities=16%  Similarity=0.279  Sum_probs=53.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      +|.++||+||++++|..+++.+...|++|+.++++.++.+.+ +++     +...   ..|-.+.+...+.++...  .+
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~l-----Ga~~---vi~~~~~~~~~~~~~~~~--~~  206 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKL-----GFDV---AFNYKTVKSLEETLKKAS--PD  206 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCCE---EEeccccccHHHHHHHhC--CC
Confidence            689999999999999999888888899999999887665544 222     3221   222222223333343332  23


Q ss_pred             CeeEEEEccc
Q 021391          108 PLNILINNAG  117 (313)
Q Consensus       108 ~id~lv~~ag  117 (313)
                      ++|+++.+.|
T Consensus       207 gvdvv~d~~G  216 (325)
T TIGR02825       207 GYDCYFDNVG  216 (325)
T ss_pred             CeEEEEECCC
Confidence            6999999887

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.39  E-value=0.0017  Score=60.16  Aligned_cols=81  Identities=15%  Similarity=0.237  Sum_probs=53.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      -.|.++||+||+|++|..+++.+...|++|+.++++.++.+.+.+++     +...   ..|-.+.+...+.+.+..  .
T Consensus       157 ~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l-----Ga~~---vi~~~~~~~~~~~i~~~~--~  226 (348)
T PLN03154        157 KKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL-----GFDE---AFNYKEEPDLDAALKRYF--P  226 (348)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc-----CCCE---EEECCCcccHHHHHHHHC--C
Confidence            36899999999999999999888889999999988877655443232     2221   123222222333333322  2


Q ss_pred             CCeeEEEEccc
Q 021391          107 RPLNILINNAG  117 (313)
Q Consensus       107 g~id~lv~~ag  117 (313)
                      +++|+++.+.|
T Consensus       227 ~gvD~v~d~vG  237 (348)
T PLN03154        227 EGIDIYFDNVG  237 (348)
T ss_pred             CCcEEEEECCC
Confidence            36999999987

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.38  E-value=0.00018  Score=61.29  Aligned_cols=47  Identities=28%  Similarity=0.211  Sum_probs=41.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHH
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVRE   71 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~   71 (313)
                      ..+++||+++|+|.+ .+|+.+++.|.+.|++|++.+++.+..+...+
T Consensus        23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~   69 (200)
T cd01075          23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAE   69 (200)
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            567999999999996 89999999999999999999999776665544

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.36  E-value=0.0011  Score=60.65  Aligned_cols=164  Identities=15%  Similarity=0.061  Sum_probs=98.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-------EEEEEecCch--hHHHHHHHHHHhC-CC-CceEEEEccCCCHHHHHHH
Q 021391           30 LTAIVTGASSGIGTETARVLALRGV-------HVIMAVRNMA--AGKDVREAIVKEI-PS-AKVDAMELDVSSLASVRKF   98 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~-------~V~l~~r~~~--~~~~~~~~l~~~~-~~-~~~~~~~~D~s~~~~v~~~   98 (313)
                      +++.|+||+|.+|..++..|+..|.       .++|.+.+..  +++....++.... +- .++.. .  -.+       
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i-~--~~~-------   72 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVI-T--DDP-------   72 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEE-e--cCc-------
Confidence            5899999999999999999998876       6999998543  2444444443321 10 01111 1  011       


Q ss_pred             HHHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccccc
Q 021391           99 ASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYS  178 (313)
Q Consensus        99 ~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~  178 (313)
                          .+....-|++|.+||....+. .   .-.+.+..|+    -+++.+.+.+.+.+   .+++.+|++|-..-....-
T Consensus        73 ----~~~~~daDivvitaG~~~k~g-~---tR~dll~~N~----~i~~~i~~~i~~~~---~~~~iiivvsNPvD~~t~~  137 (322)
T cd01338          73 ----NVAFKDADWALLVGAKPRGPG-M---ERADLLKANG----KIFTAQGKALNDVA---SRDVKVLVVGNPCNTNALI  137 (322)
T ss_pred             ----HHHhCCCCEEEEeCCCCCCCC-C---cHHHHHHHHH----HHHHHHHHHHHhhC---CCCeEEEEecCcHHHHHHH
Confidence                112246899999999754432 1   2233345554    45666666766642   1367888887644221100


Q ss_pred             CCCCCCCCCCCC-CCCccccchHhHHHHHHHHHHHHHHhccCCCcEEE
Q 021391          179 EGIRFDKINDES-AYNSFGAYGQSKLANILHAKELAKHLKEDGVNITA  225 (313)
Q Consensus       179 ~~~~~~~~~~~~-~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~v  225 (313)
                             +.... .++....|+.++.-...|...++..++-.-..|+.
T Consensus       138 -------~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~  178 (322)
T cd01338         138 -------AMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKN  178 (322)
T ss_pred             -------HHHHcCCCChHheEEehHHHHHHHHHHHHHHhCcChhHeEE
Confidence                   00112 24456689999999999999999998754323553

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.34  E-value=0.0061  Score=54.16  Aligned_cols=83  Identities=20%  Similarity=0.294  Sum_probs=53.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCc-------------------hhHHHHHHHHHHhCCCCceEEEE
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNM-------------------AAGKDVREAIVKEIPSAKVDAME   86 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~   86 (313)
                      +++.+|+|.|+ ||+|..+|..|+..|. ++.+++.+.                   .+.+.+.+.+...+|..++..+.
T Consensus        28 L~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~  106 (268)
T PRK15116         28 FADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVD  106 (268)
T ss_pred             hcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEe
Confidence            67788999876 5999999999999995 899988752                   12334444555555555555542


Q ss_pred             ccCCCHHHHHHHHHHHhhcCCCeeEEEEccc
Q 021391           87 LDVSSLASVRKFASEYNSQGRPLNILINNAG  117 (313)
Q Consensus        87 ~D~s~~~~v~~~~~~~~~~~g~id~lv~~ag  117 (313)
                       +.-+++.++.++.      ...|+||.+..
T Consensus       107 -~~i~~e~~~~ll~------~~~D~VIdaiD  130 (268)
T PRK15116        107 -DFITPDNVAEYMS------AGFSYVIDAID  130 (268)
T ss_pred             -cccChhhHHHHhc------CCCCEEEEcCC
Confidence             2223344433331      24677777764

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=97.34  E-value=0.006  Score=53.12  Aligned_cols=82  Identities=20%  Similarity=0.244  Sum_probs=56.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCc-------------------hhHHHHHHHHHHhCCCCceEEEE
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNM-------------------AAGKDVREAIVKEIPSAKVDAME   86 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~   86 (313)
                      +++++|+|.|+ ||+|..+++.|+..|. +++++|.+.                   .+.+.+.+.+.+.+|..++..+.
T Consensus         9 L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~   87 (231)
T cd00755           9 LRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE   87 (231)
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee
Confidence            56788999876 5999999999999998 899988653                   24555556666666666666666


Q ss_pred             ccCCCHHHHHHHHHHHhhcCCCeeEEEEcc
Q 021391           87 LDVSSLASVRKFASEYNSQGRPLNILINNA  116 (313)
Q Consensus        87 ~D~s~~~~v~~~~~~~~~~~g~id~lv~~a  116 (313)
                      ..++. +....++.      ...|++|.+.
T Consensus        88 ~~i~~-~~~~~l~~------~~~D~Vvdai  110 (231)
T cd00755          88 EFLTP-DNSEDLLG------GDPDFVVDAI  110 (231)
T ss_pred             eecCH-hHHHHHhc------CCCCEEEEcC
Confidence            55553 33333332      2478888776

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd08293 PTGR2 Prostaglandin reductase

Probab=97.33  E-value=0.0019  Score=59.44  Aligned_cols=78  Identities=17%  Similarity=0.249  Sum_probs=52.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      |.++||+||+|++|.++++.+...|+ +|+.++++.++.+.+.+++     +... +  .|..+. ++.+.+.++.  .+
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l-----Ga~~-v--i~~~~~-~~~~~i~~~~--~~  223 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL-----GFDA-A--INYKTD-NVAERLRELC--PE  223 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc-----CCcE-E--EECCCC-CHHHHHHHHC--CC
Confidence            48999999999999999888888899 7999998877665544433     2221 1  222222 2222233332  24


Q ss_pred             CeeEEEEccc
Q 021391          108 PLNILINNAG  117 (313)
Q Consensus       108 ~id~lv~~ag  117 (313)
                      ++|+++.+.|
T Consensus       224 gvd~vid~~g  233 (345)
T cd08293         224 GVDVYFDNVG  233 (345)
T ss_pred             CceEEEECCC
Confidence            7999999887

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.33  E-value=0.002  Score=59.42  Aligned_cols=82  Identities=18%  Similarity=0.359  Sum_probs=60.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCc---------------------hhHHHHHHHHHHhCCCCceE
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNM---------------------AAGKDVREAIVKEIPSAKVD   83 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~---------------------~~~~~~~~~l~~~~~~~~~~   83 (313)
                      .++.++|+|.|+ ||+|..++..|+..|. ++.+++.+.                     .+.+.+.+.+.+.+|..++.
T Consensus        21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~   99 (339)
T PRK07688         21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVE   99 (339)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEE
Confidence            367889999998 7999999999999999 899999863                     34455556666666666777


Q ss_pred             EEEccCCCHHHHHHHHHHHhhcCCCeeEEEEcc
Q 021391           84 AMELDVSSLASVRKFASEYNSQGRPLNILINNA  116 (313)
Q Consensus        84 ~~~~D~s~~~~v~~~~~~~~~~~g~id~lv~~a  116 (313)
                      .+..+++. +.+..+++       ..|++|.+.
T Consensus       100 ~~~~~~~~-~~~~~~~~-------~~DlVid~~  124 (339)
T PRK07688        100 AIVQDVTA-EELEELVT-------GVDLIIDAT  124 (339)
T ss_pred             EEeccCCH-HHHHHHHc-------CCCEEEEcC
Confidence            77777754 33444433       568888875

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.32  E-value=0.0017  Score=60.83  Aligned_cols=83  Identities=19%  Similarity=0.311  Sum_probs=61.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecC-------------------chhHHHHHHHHHHhCCCCceEEE
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRN-------------------MAAGKDVREAIVKEIPSAKVDAM   85 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~   85 (313)
                      .+++++|+|.|+ ||+|..++..|+..|. ++++++++                   ..+.+.+.+.+.+.+|..++..+
T Consensus       132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  210 (376)
T PRK08762        132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV  210 (376)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            367888999966 7999999999999999 79999987                   45677777777777666666666


Q ss_pred             EccCCCHHHHHHHHHHHhhcCCCeeEEEEccc
Q 021391           86 ELDVSSLASVRKFASEYNSQGRPLNILINNAG  117 (313)
Q Consensus        86 ~~D~s~~~~v~~~~~~~~~~~g~id~lv~~ag  117 (313)
                      ...+++ +.+..+++       ..|+||++..
T Consensus       211 ~~~~~~-~~~~~~~~-------~~D~Vv~~~d  234 (376)
T PRK08762        211 QERVTS-DNVEALLQ-------DVDVVVDGAD  234 (376)
T ss_pred             eccCCh-HHHHHHHh-------CCCEEEECCC
Confidence            555543 33444443       5788888874

>PRK06849 hypothetical protein; Provisional

Probab=97.31  E-value=0.0019  Score=60.71  Aligned_cols=83  Identities=18%  Similarity=0.117  Sum_probs=55.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      +.|+|||||++..+|.++++.|.+.|++|++++.+........+.+      .....+...-.+++...+.+.++.+++ 
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~------d~~~~~p~p~~d~~~~~~~L~~i~~~~-   75 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV------DGFYTIPSPRWDPDAYIQALLSIVQRE-   75 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh------hheEEeCCCCCCHHHHHHHHHHHHHHc-
Confidence            4699999999999999999999999999999998764433211111      122222223344444444444555554 


Q ss_pred             CeeEEEEccc
Q 021391          108 PLNILINNAG  117 (313)
Q Consensus       108 ~id~lv~~ag  117 (313)
                      ++|++|....
T Consensus        76 ~id~vIP~~e   85 (389)
T PRK06849         76 NIDLLIPTCE   85 (389)
T ss_pred             CCCEEEECCh
Confidence            5899998875

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.31  E-value=0.00049  Score=67.26  Aligned_cols=49  Identities=29%  Similarity=0.409  Sum_probs=42.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHH
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAI   73 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l   73 (313)
                      ..++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++
T Consensus       374 ~~~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        374 GSPLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             ccCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            45688999999999 59999999999999999999999988777766544

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.30  E-value=0.0012  Score=59.27  Aligned_cols=48  Identities=25%  Similarity=0.274  Sum_probs=42.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHH
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIV   74 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~   74 (313)
                      ++++|+++|.|+ ||.|++++..|++.|+ +|+++.|+.++.+++.+.+.
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~  170 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGV  170 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhh
Confidence            468999999987 8999999999999998 79999999988888776653

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=97.27  E-value=0.0033  Score=55.35  Aligned_cols=83  Identities=13%  Similarity=0.291  Sum_probs=59.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCc-------------------hhHHHHHHHHHHhCCCCceEEE
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNM-------------------AAGKDVREAIVKEIPSAKVDAM   85 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~   85 (313)
                      .+++++|+|.|+ ||+|..+++.|+..|. ++.+++.+.                   .+.+.+.+.+.+.+|..++..+
T Consensus        29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~  107 (245)
T PRK05690         29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETI  107 (245)
T ss_pred             HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence            468899999998 9999999999999998 788887653                   2445555666666676677777


Q ss_pred             EccCCCHHHHHHHHHHHhhcCCCeeEEEEccc
Q 021391           86 ELDVSSLASVRKFASEYNSQGRPLNILINNAG  117 (313)
Q Consensus        86 ~~D~s~~~~v~~~~~~~~~~~g~id~lv~~ag  117 (313)
                      ...++. +.+..+++       ..|++|.+..
T Consensus       108 ~~~i~~-~~~~~~~~-------~~DiVi~~~D  131 (245)
T PRK05690        108 NARLDD-DELAALIA-------GHDLVLDCTD  131 (245)
T ss_pred             eccCCH-HHHHHHHh-------cCCEEEecCC
Confidence            666653 23333333       5788888763

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=97.27  E-value=0.0024  Score=57.59  Aligned_cols=85  Identities=19%  Similarity=0.242  Sum_probs=54.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCch---hHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHH
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMA---AGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFA   99 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~   99 (313)
                      ..++++|++||.|| ||-+++++..|+..|+ +|.++.|+.+   +++.+.+.+...+ +..+.+  .++.+.+.+.   
T Consensus       119 ~~~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~-~~~~~~--~~~~~~~~l~---  191 (288)
T PRK12749        119 GFDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENT-DCVVTV--TDLADQQAFA---  191 (288)
T ss_pred             CCCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhcc-CceEEE--echhhhhhhh---
Confidence            45678999999997 5669999999999998 7999999853   6666655553322 111222  1221111111   


Q ss_pred             HHHhhcCCCeeEEEEcccCC
Q 021391          100 SEYNSQGRPLNILINNAGIM  119 (313)
Q Consensus       100 ~~~~~~~g~id~lv~~ag~~  119 (313)
                      +    .....|+|||+..+.
T Consensus       192 ~----~~~~aDivINaTp~G  207 (288)
T PRK12749        192 E----ALASADILTNGTKVG  207 (288)
T ss_pred             h----hcccCCEEEECCCCC
Confidence            1    123689999987554

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.20  E-value=0.0035  Score=58.21  Aligned_cols=82  Identities=20%  Similarity=0.255  Sum_probs=61.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCc-------------------hhHHHHHHHHHHhCCCCceEEE
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNM-------------------AAGKDVREAIVKEIPSAKVDAM   85 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~   85 (313)
                      .+++++|+|.|+ ||+|..+++.|+..|. ++.+++.+.                   .+.+.+.+.+.+.+|..++..+
T Consensus        25 ~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~  103 (355)
T PRK05597         25 SLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVS  103 (355)
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEE
Confidence            367899999988 7999999999999998 799988764                   4667777778887777777777


Q ss_pred             EccCCCHHHHHHHHHHHhhcCCCeeEEEEcc
Q 021391           86 ELDVSSLASVRKFASEYNSQGRPLNILINNA  116 (313)
Q Consensus        86 ~~D~s~~~~v~~~~~~~~~~~g~id~lv~~a  116 (313)
                      ...++.. ....+++       ..|+||.+.
T Consensus       104 ~~~i~~~-~~~~~~~-------~~DvVvd~~  126 (355)
T PRK05597        104 VRRLTWS-NALDELR-------DADVILDGS  126 (355)
T ss_pred             EeecCHH-HHHHHHh-------CCCEEEECC
Confidence            6666543 2333333       467777765

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=97.20  E-value=0.0033  Score=54.04  Aligned_cols=81  Identities=16%  Similarity=0.272  Sum_probs=57.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCc------------------hhHHHHHHHHHHhCCCCceEEEEc
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNM------------------AAGKDVREAIVKEIPSAKVDAMEL   87 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~------------------~~~~~~~~~l~~~~~~~~~~~~~~   87 (313)
                      ++.++|+|.|+ ||+|..+++.|+..|. ++.++|.+.                  .+.+.+.+.+.+.+|..++..+..
T Consensus        26 L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~  104 (212)
T PRK08644         26 LKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNE  104 (212)
T ss_pred             HhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEee
Confidence            67789999995 8999999999999999 699998872                  345555555666666666666666


Q ss_pred             cCCCHHHHHHHHHHHhhcCCCeeEEEEcc
Q 021391           88 DVSSLASVRKFASEYNSQGRPLNILINNA  116 (313)
Q Consensus        88 D~s~~~~v~~~~~~~~~~~g~id~lv~~a  116 (313)
                      .+++. .+.++++       ..|++|.+.
T Consensus       105 ~i~~~-~~~~~~~-------~~DvVI~a~  125 (212)
T PRK08644        105 KIDED-NIEELFK-------DCDIVVEAF  125 (212)
T ss_pred             ecCHH-HHHHHHc-------CCCEEEECC
Confidence            66542 2333332       567777774

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.20  E-value=0.001  Score=58.86  Aligned_cols=75  Identities=13%  Similarity=0.246  Sum_probs=56.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      +++||+|||+- |+.+++.|.++|++|+++.++....+...+        .....+..+..+.+++.+++.+.     ++
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~--------~g~~~v~~g~l~~~~l~~~l~~~-----~i   66 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI--------HQALTVHTGALDPQELREFLKRH-----SI   66 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc--------cCCceEEECCCCHHHHHHHHHhc-----CC
Confidence            47999999998 999999999999999999998765433221        12334556777777776776643     79


Q ss_pred             eEEEEcccC
Q 021391          110 NILINNAGI  118 (313)
Q Consensus       110 d~lv~~ag~  118 (313)
                      |+||+.+..
T Consensus        67 ~~VIDAtHP   75 (256)
T TIGR00715        67 DILVDATHP   75 (256)
T ss_pred             CEEEEcCCH
Confidence            999999863

This enzyme was found to be a monomer by gel filtration.

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.19  E-value=0.0017  Score=61.38  Aligned_cols=75  Identities=16%  Similarity=0.306  Sum_probs=54.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      ++.||+++|.|+ ||+|+.+++.|+..|+ +++++.|+.++++.+.+++    +..  ..+     ..++....+     
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~----~~~--~~~-----~~~~l~~~l-----  240 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAF----RNA--SAH-----YLSELPQLI-----  240 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHh----cCC--eEe-----cHHHHHHHh-----
Confidence            589999999999 9999999999999997 7999999988777665543    111  111     122222222     


Q ss_pred             cCCCeeEEEEcccCC
Q 021391          105 QGRPLNILINNAGIM  119 (313)
Q Consensus       105 ~~g~id~lv~~ag~~  119 (313)
                        ...|+||++.+..
T Consensus       241 --~~aDiVI~aT~a~  253 (414)
T PRK13940        241 --KKADIIIAAVNVL  253 (414)
T ss_pred             --ccCCEEEECcCCC
Confidence              3689999999864

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.19  E-value=0.0054  Score=53.75  Aligned_cols=79  Identities=20%  Similarity=0.249  Sum_probs=53.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      .+|.+++|+|+++ +|.++++.+...|.+|++++++.+..+.+ +++     +..   ...|..+.+....+.   ....
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~~~~~~~~---~~~~  199 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KEL-----GAD---HVIDYKEEDLEEELR---LTGG  199 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHh-----CCc---eeccCCcCCHHHHHH---HhcC
Confidence            4689999999999 99999999999999999999887654433 221     211   123433433333333   2233


Q ss_pred             CCeeEEEEcccC
Q 021391          107 RPLNILINNAGI  118 (313)
Q Consensus       107 g~id~lv~~ag~  118 (313)
                      +++|++++++|.
T Consensus       200 ~~~d~vi~~~~~  211 (271)
T cd05188         200 GGADVVIDAVGG  211 (271)
T ss_pred             CCCCEEEECCCC
Confidence            579999999873

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK14968 putative methyltransferase; Provisional

Probab=97.17  E-value=0.0056  Score=51.04  Aligned_cols=80  Identities=19%  Similarity=0.155  Sum_probs=57.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCc-eEEEEccCCCHHHHHHHHHHHhhc
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAK-VDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~-~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      .+++++|-.|++.|.   ++..|+.++.+|+.++++++..+.+.+.+.......+ +.++.+|+.+.-         .+ 
T Consensus        22 ~~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~---------~~-   88 (188)
T PRK14968         22 KKGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEPF---------RG-   88 (188)
T ss_pred             cCCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEeccccccc---------cc-
Confidence            477899999988886   6667777789999999998877777666654322222 778888875421         11 


Q ss_pred             CCCeeEEEEcccCCC
Q 021391          106 GRPLNILINNAGIMA  120 (313)
Q Consensus       106 ~g~id~lv~~ag~~~  120 (313)
                       ..+|.++.|..+..
T Consensus        89 -~~~d~vi~n~p~~~  102 (188)
T PRK14968         89 -DKFDVILFNPPYLP  102 (188)
T ss_pred             -cCceEEEECCCcCC
Confidence             26899999887654

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=97.13  E-value=0.0085  Score=54.79  Aligned_cols=73  Identities=19%  Similarity=0.274  Sum_probs=53.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .|++++|+|++ |+|...++-....|++|+..+|+.++.+.+.+ +     +...   ..|.++++.++.+.+       
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~-l-----GAd~---~i~~~~~~~~~~~~~-------  228 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKK-L-----GADH---VINSSDSDALEAVKE-------  228 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH-h-----CCcE---EEEcCCchhhHHhHh-------
Confidence            58999999999 99988877777799999999999988776543 2     2222   223335555544444       


Q ss_pred             CeeEEEEccc
Q 021391          108 PLNILINNAG  117 (313)
Q Consensus       108 ~id~lv~~ag  117 (313)
                      ..|+++.+++
T Consensus       229 ~~d~ii~tv~  238 (339)
T COG1064         229 IADAIIDTVG  238 (339)
T ss_pred             hCcEEEECCC
Confidence            2899999997

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.10  E-value=0.0034  Score=58.69  Aligned_cols=76  Identities=14%  Similarity=0.153  Sum_probs=54.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      +.+++++|.|+ |.+|+.+++.+...|++|++++|+.++++.+...+     +.   .+..+..+.+.+.+.+.      
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~-----g~---~v~~~~~~~~~l~~~l~------  229 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF-----GG---RIHTRYSNAYEIEDAVK------  229 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc-----Cc---eeEeccCCHHHHHHHHc------
Confidence            56788999988 78999999999999999999999977665543322     11   12334555555544433      


Q ss_pred             CCeeEEEEcccC
Q 021391          107 RPLNILINNAGI  118 (313)
Q Consensus       107 g~id~lv~~ag~  118 (313)
                       ..|++|++++.
T Consensus       230 -~aDvVI~a~~~  240 (370)
T TIGR00518       230 -RADLLIGAVLI  240 (370)
T ss_pred             -cCCEEEEcccc
Confidence             57999999865

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.10  E-value=0.0051  Score=53.50  Aligned_cols=83  Identities=14%  Similarity=0.288  Sum_probs=60.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecC-------------------chhHHHHHHHHHHhCCCCceEEE
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRN-------------------MAAGKDVREAIVKEIPSAKVDAM   85 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~   85 (313)
                      .+.+++|+|.| .||+|..+++.|+..|. +++++|.+                   ..+.+.+.+.+.+.+|..++..+
T Consensus        18 ~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~   96 (228)
T cd00757          18 KLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY   96 (228)
T ss_pred             HHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            46788999998 57999999999999998 78887543                   23556666777777776677777


Q ss_pred             EccCCCHHHHHHHHHHHhhcCCCeeEEEEccc
Q 021391           86 ELDVSSLASVRKFASEYNSQGRPLNILINNAG  117 (313)
Q Consensus        86 ~~D~s~~~~v~~~~~~~~~~~g~id~lv~~ag  117 (313)
                      ..+++ .+.+..+++       ..|++|.+..
T Consensus        97 ~~~i~-~~~~~~~~~-------~~DvVi~~~d  120 (228)
T cd00757          97 NERLD-AENAEELIA-------GYDLVLDCTD  120 (228)
T ss_pred             cceeC-HHHHHHHHh-------CCCEEEEcCC
Confidence            76664 333444443       5788888874

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=97.08  E-value=0.0061  Score=55.56  Aligned_cols=121  Identities=21%  Similarity=0.200  Sum_probs=70.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCc--hhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           30 LTAIVTGASSGIGTETARVLALRGV--HVIMAVRNM--AAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~--~V~l~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      +++.|+||+|.+|..++..|+..|.  .|++++|+.  ++++.....+.......... ..+..++.  .+.        
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~-~~i~~~~d--~~~--------   69 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGID-AEIKISSD--LSD--------   69 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCC-cEEEECCC--HHH--------
Confidence            4789999999999999999999986  499999964  44444443343211000000 01111111  111        


Q ss_pred             CCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          106 GRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                      ....|++|.++|....+.    ..-...+..|+.-    ++.+.+.+.+.    ..++.+|++++...
T Consensus        70 l~~aDiViitag~p~~~~----~~r~dl~~~n~~i----~~~~~~~i~~~----~~~~~viv~~npvd  125 (309)
T cd05294          70 VAGSDIVIITAGVPRKEG----MSRLDLAKKNAKI----VKKYAKQIAEF----APDTKILVVTNPVD  125 (309)
T ss_pred             hCCCCEEEEecCCCCCCC----CCHHHHHHHHHHH----HHHHHHHHHHH----CCCeEEEEeCCchH
Confidence            236899999999754321    1223344455444    44444444443    23678888888653

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.07  E-value=0.0031  Score=56.49  Aligned_cols=81  Identities=19%  Similarity=0.270  Sum_probs=58.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .+.+|++++|.|| ||-+++++..|++.|+ +|+++.|+.++++++.+.+...+.    .....+..+.+..+       
T Consensus       122 ~~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~----~~~~~~~~~~~~~~-------  189 (283)
T COG0169         122 VDVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGA----AVEAAALADLEGLE-------  189 (283)
T ss_pred             cccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc----cccccccccccccc-------
Confidence            5668999999997 5779999999999996 799999999999988887755421    11122233322211       


Q ss_pred             hcCCCeeEEEEcccCCCC
Q 021391          104 SQGRPLNILINNAGIMAS  121 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~  121 (313)
                          ..|++||+......
T Consensus       190 ----~~dliINaTp~Gm~  203 (283)
T COG0169         190 ----EADLLINATPVGMA  203 (283)
T ss_pred             ----ccCEEEECCCCCCC
Confidence                36999999876544

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=97.03  E-value=0.0061  Score=50.69  Aligned_cols=77  Identities=18%  Similarity=0.356  Sum_probs=49.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCc------------------hhHHHHHHHHHHhCCCCceEEEEccCCC
Q 021391           31 TAIVTGASSGIGTETARVLALRGV-HVIMAVRNM------------------AAGKDVREAIVKEIPSAKVDAMELDVSS   91 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G~-~V~l~~r~~------------------~~~~~~~~~l~~~~~~~~~~~~~~D~s~   91 (313)
                      +|+|.|+ ||+|..+++.|+..|. +++++|.+.                  .+.+.+.+.+.+.+|..++..+...++.
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~   79 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE   79 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh
Confidence            3678885 8999999999999999 699999875                  2344444445555555555555555543


Q ss_pred             HHHHHHHHHHHhhcCCCeeEEEEcc
Q 021391           92 LASVRKFASEYNSQGRPLNILINNA  116 (313)
Q Consensus        92 ~~~v~~~~~~~~~~~g~id~lv~~a  116 (313)
                       +.+.++++       ..|++|.+.
T Consensus        80 -~~~~~~l~-------~~DlVi~~~   96 (174)
T cd01487          80 -NNLEGLFG-------DCDIVVEAF   96 (174)
T ss_pred             -hhHHHHhc-------CCCEEEECC
Confidence             22333322       467777664

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.01  E-value=0.0042  Score=55.94  Aligned_cols=44  Identities=23%  Similarity=0.277  Sum_probs=38.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHH
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKD   68 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~   68 (313)
                      .+++.|++++|.|. |++|+++++.|...|++|++++|+.++.+.
T Consensus       146 ~~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~  189 (287)
T TIGR02853       146 DFTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR  189 (287)
T ss_pred             CCCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            45789999999999 669999999999999999999999765443

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.00  E-value=0.011  Score=46.96  Aligned_cols=80  Identities=20%  Similarity=0.397  Sum_probs=60.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecC-------------------chhHHHHHHHHHHhCCCCceEEEEcc
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGV-HVIMAVRN-------------------MAAGKDVREAIVKEIPSAKVDAMELD   88 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~D   88 (313)
                      .++++|.|+ ||+|..+++.|+..|. ++.++|.+                   ..+.+.+.+.+.+.+|..++..+..+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            467888875 6899999999999999 79988764                   23566677777788888888888888


Q ss_pred             CCCHHHHHHHHHHHhhcCCCeeEEEEccc
Q 021391           89 VSSLASVRKFASEYNSQGRPLNILINNAG  117 (313)
Q Consensus        89 ~s~~~~v~~~~~~~~~~~g~id~lv~~ag  117 (313)
                      + +.+....+++       ..|++|.+..
T Consensus        81 ~-~~~~~~~~~~-------~~d~vi~~~d  101 (135)
T PF00899_consen   81 I-DEENIEELLK-------DYDIVIDCVD  101 (135)
T ss_dssp             C-SHHHHHHHHH-------TSSEEEEESS
T ss_pred             c-cccccccccc-------CCCEEEEecC
Confidence            8 3444555554       6789988864

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.00  E-value=0.0035  Score=56.24  Aligned_cols=80  Identities=10%  Similarity=0.158  Sum_probs=56.4

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCC-CHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS-SLASVRKFASE  101 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s-~~~~v~~~~~~  101 (313)
                      .++. .|+++.|+|++| +|.--++---+.|.+|++.++...+-+++.+.|.+     .   .-+|.+ |++.++++.+.
T Consensus       177 ~g~~-pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGA-----d---~fv~~~~d~d~~~~~~~~  246 (360)
T KOG0023|consen  177 SGLG-PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGA-----D---VFVDSTEDPDIMKAIMKT  246 (360)
T ss_pred             cCCC-CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCc-----c---eeEEecCCHHHHHHHHHh
Confidence            3444 899999999998 99766555556799999999998888888877632     2   234555 77777777664


Q ss_pred             HhhcCCCeeEEEEc
Q 021391          102 YNSQGRPLNILINN  115 (313)
Q Consensus       102 ~~~~~g~id~lv~~  115 (313)
                      .   .+.+|.++|.
T Consensus       247 ~---dg~~~~v~~~  257 (360)
T KOG0023|consen  247 T---DGGIDTVSNL  257 (360)
T ss_pred             h---cCcceeeeec
Confidence            3   3345555544

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.99  E-value=0.017  Score=52.37  Aligned_cols=43  Identities=28%  Similarity=0.284  Sum_probs=37.4

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHH
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGK   67 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~   67 (313)
                      ..++.|++++|.|. |++|+.++..|...|++|++++|+.+..+
T Consensus       147 ~~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~  189 (296)
T PRK08306        147 PITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLA  189 (296)
T ss_pred             CCCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            35678999999997 67999999999999999999999966543

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.97  E-value=0.006  Score=54.73  Aligned_cols=80  Identities=19%  Similarity=0.363  Sum_probs=54.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      .+|.+++|+|+++++|.++++.+...|++|++++++.+..+.+ +++     +..   ..+|..+.+..+.+.+ ... .
T Consensus       138 ~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~~~~~~~~~-~~~-~  206 (323)
T cd05276         138 KAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL-----GAD---VAINYRTEDFAEEVKE-ATG-G  206 (323)
T ss_pred             CCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc-----CCC---EEEeCCchhHHHHHHH-HhC-C
Confidence            4689999999999999999999999999999999887655443 222     221   2234333333333322 221 2


Q ss_pred             CCeeEEEEccc
Q 021391          107 RPLNILINNAG  117 (313)
Q Consensus       107 g~id~lv~~ag  117 (313)
                      +++|+++++.|
T Consensus       207 ~~~d~vi~~~g  217 (323)
T cd05276         207 RGVDVILDMVG  217 (323)
T ss_pred             CCeEEEEECCc
Confidence            46999999997

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.92  E-value=0.011  Score=52.83  Aligned_cols=107  Identities=16%  Similarity=0.215  Sum_probs=74.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      +|.|++|++|+|.+|.-+.+----.|++|+.++-..++..-+.+++     +.   -...|-..+ ++.+.+++..-  .
T Consensus       150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~l-----Gf---D~~idyk~~-d~~~~L~~a~P--~  218 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEEL-----GF---DAGIDYKAE-DFAQALKEACP--K  218 (340)
T ss_pred             CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhc-----CC---ceeeecCcc-cHHHHHHHHCC--C
Confidence            5899999999999997665544457999999998888877666554     11   123343343 33333333322  3


Q ss_pred             CeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccc
Q 021391          108 PLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFA  176 (313)
Q Consensus       108 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~  176 (313)
                      +||+.+-|.|.-                        +..++++.|+.       .+||+.++-++++..
T Consensus       219 GIDvyfeNVGg~------------------------v~DAv~~~ln~-------~aRi~~CG~IS~YN~  256 (340)
T COG2130         219 GIDVYFENVGGE------------------------VLDAVLPLLNL-------FARIPVCGAISQYNA  256 (340)
T ss_pred             CeEEEEEcCCch------------------------HHHHHHHhhcc-------ccceeeeeehhhcCC
Confidence            799999999842                        45567777766       789999988877654

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.92  E-value=0.013  Score=56.88  Aligned_cols=112  Identities=21%  Similarity=0.246  Sum_probs=70.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCH-------------H
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSL-------------A   93 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~-------------~   93 (313)
                      ..+.+|+|.|+ |.+|...+..+...|++|++++++.++.+...+ +     +..  ++..|..+.             +
T Consensus       163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-l-----GA~--~v~i~~~e~~~~~~gya~~~s~~  233 (509)
T PRK09424        163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-M-----GAE--FLELDFEEEGGSGDGYAKVMSEE  233 (509)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c-----CCe--EEEeccccccccccchhhhcchh
Confidence            46899999987 689999999999999999999999877664432 2     333  333333221             1


Q ss_pred             HHHHHHHHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCc
Q 021391           94 SVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSE  171 (313)
Q Consensus        94 ~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~  171 (313)
                      ..+...+.+.+..++.|++|.++|....+.                 +..+++.....|++       ++.||.++..
T Consensus       234 ~~~~~~~~~~~~~~gaDVVIetag~pg~~a-----------------P~lit~~~v~~mkp-------GgvIVdvg~~  287 (509)
T PRK09424        234 FIKAEMALFAEQAKEVDIIITTALIPGKPA-----------------PKLITAEMVASMKP-------GSVIVDLAAE  287 (509)
T ss_pred             HHHHHHHHHHhccCCCCEEEECCCCCcccC-----------------cchHHHHHHHhcCC-------CCEEEEEccC
Confidence            111222222222356999999999743211                 22234556666654       7889988763

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.92  E-value=0.0082  Score=51.11  Aligned_cols=35  Identities=26%  Similarity=0.367  Sum_probs=32.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRN   62 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~   62 (313)
                      ++.++|+|.|+ ||+|..++..|+..|. +++++|++
T Consensus        19 L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        19 LEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            67789999998 6899999999999999 79999987

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.92  E-value=0.0051  Score=55.88  Aligned_cols=42  Identities=31%  Similarity=0.389  Sum_probs=36.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHH
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKD   68 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~   68 (313)
                      -.|.+++|+||++++|.++++.+...|++|+.+.++.+..+.
T Consensus       161 ~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~  202 (332)
T cd08259         161 KKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKI  202 (332)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Confidence            357899999999999999999999999999999987665443

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.88  E-value=0.0069  Score=55.08  Aligned_cols=80  Identities=15%  Similarity=0.244  Sum_probs=52.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      -+|.+++|.|+++++|.+++..+.+.|++|+.++++.++.+.+.+.+     +.. .  ..|..+.+..+. +.+..  .
T Consensus       144 ~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~-----g~~-~--~~~~~~~~~~~~-v~~~~--~  212 (329)
T cd05288         144 KPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEEL-----GFD-A--AINYKTPDLAEA-LKEAA--P  212 (329)
T ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhc-----CCc-e--EEecCChhHHHH-HHHhc--c
Confidence            36799999999999999999999999999999998876655433212     221 1  122223222222 22222  1


Q ss_pred             CCeeEEEEccc
Q 021391          107 RPLNILINNAG  117 (313)
Q Consensus       107 g~id~lv~~ag  117 (313)
                      +++|+++++.|
T Consensus       213 ~~~d~vi~~~g  223 (329)
T cd05288         213 DGIDVYFDNVG  223 (329)
T ss_pred             CCceEEEEcch
Confidence            47999999987

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.88  E-value=0.015  Score=53.51  Aligned_cols=77  Identities=13%  Similarity=0.160  Sum_probs=51.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      ..|++++|+|+ |++|...+..+...|+ +|++++++.++.+.+ +++     +...   ..|..+. ++.+    +.+.
T Consensus       168 ~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a-~~l-----Ga~~---vi~~~~~-~~~~----~~~~  232 (343)
T PRK09880        168 LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA-REM-----GADK---LVNPQND-DLDH----YKAE  232 (343)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH-HHc-----CCcE---EecCCcc-cHHH----Hhcc
Confidence            36899999986 8999999988888898 688899887766533 223     3221   2243332 2222    2222


Q ss_pred             CCCeeEEEEcccC
Q 021391          106 GRPLNILINNAGI  118 (313)
Q Consensus       106 ~g~id~lv~~ag~  118 (313)
                      .+++|+++.+.|.
T Consensus       233 ~g~~D~vid~~G~  245 (343)
T PRK09880        233 KGYFDVSFEVSGH  245 (343)
T ss_pred             CCCCCEEEECCCC
Confidence            3569999999983

>PRK08223 hypothetical protein; Validated

Probab=96.87  E-value=0.0076  Score=53.93  Aligned_cols=36  Identities=19%  Similarity=0.220  Sum_probs=31.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecC
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRN   62 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~   62 (313)
                      .+++.+|+|.|+ ||+|..++..|+..|. ++.++|.+
T Consensus        24 kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D   60 (287)
T PRK08223         24 RLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFD   60 (287)
T ss_pred             HHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            367889999987 5999999999999998 78888876

>PTZ00117 malate dehydrogenase; Provisional

Probab=96.84  E-value=0.04  Score=50.48  Aligned_cols=121  Identities=11%  Similarity=0.081  Sum_probs=73.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcC-CEEEEEecCchhHHHHHHHHHHhCC--CCceEEEEccCCCHHHHHHHHHHHh
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRG-VHVIMAVRNMAAGKDVREAIVKEIP--SAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G-~~V~l~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .+.+++.|.|| |.+|..++..++..| ..|++.+++.+.++...-++....+  +... .+.. -+|.   + .+    
T Consensus         3 ~~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~-~i~~-~~d~---~-~l----   71 (319)
T PTZ00117          3 VKRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNI-NILG-TNNY---E-DI----   71 (319)
T ss_pred             CCCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCe-EEEe-CCCH---H-Hh----
Confidence            35678999997 889999999999999 6899999988665433322322110  1111 1111 1121   2 11    


Q ss_pred             hcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          104 SQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                         ..-|++|.++|....+.    ......+..|.    .+.+.+.+.+.+.    .+++.+|++|-...
T Consensus        72 ---~~ADiVVitag~~~~~g----~~r~dll~~n~----~i~~~i~~~i~~~----~p~a~vivvsNP~d  126 (319)
T PTZ00117         72 ---KDSDVVVITAGVQRKEE----MTREDLLTING----KIMKSVAESVKKY----CPNAFVICVTNPLD  126 (319)
T ss_pred             ---CCCCEEEECCCCCCCCC----CCHHHHHHHHH----HHHHHHHHHHHHH----CCCeEEEEecChHH
Confidence               26799999999754321    12334555555    4566777777664    34667888876543

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=96.84  E-value=0.013  Score=53.35  Aligned_cols=118  Identities=15%  Similarity=0.121  Sum_probs=71.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           30 LTAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      +++.|+|++|.+|.++|..|+.+|.  .+++++.+  .++...-+|....+  ......+.  ..+++       .+.+.
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~--~~~i~~~~--~~~~~-------y~~~~   67 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINT--PAKVTGYL--GPEEL-------KKALK   67 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCC--cceEEEec--CCCch-------HHhcC
Confidence            3688999999999999999999884  79999988  43433334443211  11111110  00111       12234


Q ss_pred             CeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391          108 PLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus       108 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                      ..|++|.+||....+.    +.-...++.|..-.    +.+.+.+.+.    ..++.+|++|-..
T Consensus        68 daDivvitaG~~~k~g----~tR~dll~~N~~i~----~~i~~~i~~~----~p~a~vivvtNPv  120 (310)
T cd01337          68 GADVVVIPAGVPRKPG----MTRDDLFNINAGIV----RDLATAVAKA----CPKALILIISNPV  120 (310)
T ss_pred             CCCEEEEeCCCCCCCC----CCHHHHHHHHHHHH----HHHHHHHHHh----CCCeEEEEccCch
Confidence            7899999999854432    23444556665544    4444444443    3467888888766

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.84  E-value=0.0015  Score=45.76  Aligned_cols=36  Identities=28%  Similarity=0.274  Sum_probs=23.7

Q ss_pred             CCC-CEEEEeCCCCchHHHHHHHHH-HcCCEEEEEecC
Q 021391           27 GTG-LTAIVTGASSGIGTETARVLA-LRGVHVIMAVRN   62 (313)
Q Consensus        27 ~~g-k~~lItGas~giG~aia~~La-~~G~~V~l~~r~   62 (313)
                      ++| |+|||+|+|+|.|.+-.-.++ ..|++.+.+..+
T Consensus        36 ~~GpK~VLViGaStGyGLAsRIa~aFg~gA~TiGV~fE   73 (78)
T PF12242_consen   36 INGPKKVLVIGASTGYGLASRIAAAFGAGADTIGVSFE   73 (78)
T ss_dssp             -TS-SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE--
T ss_pred             CCCCceEEEEecCCcccHHHHHHHHhcCCCCEEEEeec
Confidence            355 999999999999999444444 678888877754

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.80  E-value=0.0054  Score=53.26  Aligned_cols=75  Identities=16%  Similarity=0.252  Sum_probs=57.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      |+++|.|+ |-+|+.+|+.|.++|++|++++++++..++..++      ....+.+.+|-++++.++++--      ...
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~------~~~~~~v~gd~t~~~~L~~agi------~~a   67 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD------ELDTHVVIGDATDEDVLEEAGI------DDA   67 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh------hcceEEEEecCCCHHHHHhcCC------CcC
Confidence            45667766 5679999999999999999999998887764432      2357899999999887655511      257


Q ss_pred             eEEEEccc
Q 021391          110 NILINNAG  117 (313)
Q Consensus       110 d~lv~~ag  117 (313)
                      |++|-..|
T Consensus        68 D~vva~t~   75 (225)
T COG0569          68 DAVVAATG   75 (225)
T ss_pred             CEEEEeeC
Confidence            88887776

>PRK08328 hypothetical protein; Provisional

Probab=96.78  E-value=0.015  Score=50.63  Aligned_cols=37  Identities=24%  Similarity=0.371  Sum_probs=31.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNM   63 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~   63 (313)
                      .+++++|+|.|++ |+|..+++.|+..|. +++++|.+.
T Consensus        24 ~L~~~~VlIiG~G-GlGs~ia~~La~~Gvg~i~lvD~D~   61 (231)
T PRK08328         24 KLKKAKVAVVGVG-GLGSPVAYYLAAAGVGRILLIDEQT   61 (231)
T ss_pred             HHhCCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            3577889999875 999999999999998 798988654

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.78  E-value=0.014  Score=51.14  Aligned_cols=83  Identities=13%  Similarity=0.302  Sum_probs=55.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCc-------------------hhHHHHHHHHHHhCCCCceEEE
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNM-------------------AAGKDVREAIVKEIPSAKVDAM   85 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~   85 (313)
                      .+++++|+|.|+ ||+|..++..|+..|. +++++|.+.                   .+.+.+.+.+.+.+|..++..+
T Consensus        21 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~   99 (240)
T TIGR02355        21 ALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPI   99 (240)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEE
Confidence            467788999976 5999999999999998 788887653                   2444555556666666666655


Q ss_pred             EccCCCHHHHHHHHHHHhhcCCCeeEEEEccc
Q 021391           86 ELDVSSLASVRKFASEYNSQGRPLNILINNAG  117 (313)
Q Consensus        86 ~~D~s~~~~v~~~~~~~~~~~g~id~lv~~ag  117 (313)
                      ...++. +.+.++++       ..|++|.+..
T Consensus       100 ~~~i~~-~~~~~~~~-------~~DlVvd~~D  123 (240)
T TIGR02355       100 NAKLDD-AELAALIA-------EHDIVVDCTD  123 (240)
T ss_pred             eccCCH-HHHHHHhh-------cCCEEEEcCC
Confidence            544433 23333333       5677777663

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.78  E-value=0.005  Score=55.29  Aligned_cols=40  Identities=25%  Similarity=0.281  Sum_probs=36.6

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecC
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRN   62 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~   62 (313)
                      ...+++||+++|.|+++-.|+.++..|+++|++|.++.|.
T Consensus       153 ~~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        153 YNIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             cCCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            4678999999999999999999999999999999998874

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.76  E-value=0.0095  Score=56.41  Aligned_cols=43  Identities=21%  Similarity=0.237  Sum_probs=38.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHH
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGK   67 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~   67 (313)
                      +..+.||+++|.|. |.||+.+++.|...|++|+++++++.+..
T Consensus       207 ~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~  249 (425)
T PRK05476        207 NVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICAL  249 (425)
T ss_pred             cCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhH
Confidence            45689999999997 68999999999999999999999876543

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.75  E-value=0.0069  Score=50.53  Aligned_cols=47  Identities=30%  Similarity=0.258  Sum_probs=38.9

Q ss_pred             hhccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHH
Q 021391           20 EVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGK   67 (313)
Q Consensus        20 ~~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~   67 (313)
                      ......++.|+++.|.|. |.||+++|+.|...|++|+..+|......
T Consensus        27 ~~~~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~   73 (178)
T PF02826_consen   27 ERFPGRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE   73 (178)
T ss_dssp             TTTTBS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred             cCCCccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh
Confidence            344566799999999976 89999999999999999999999876544

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.75  E-value=0.0076  Score=57.43  Aligned_cols=74  Identities=26%  Similarity=0.425  Sum_probs=53.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      ++.|++++|.|+ |.+|+.+++.|...|+ +|++++|+.++.+...+++     +..  .+     +.++....+     
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~-----g~~--~~-----~~~~~~~~l-----  240 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF-----GGE--AI-----PLDELPEAL-----  240 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc-----CCc--Ee-----eHHHHHHHh-----
Confidence            478999999987 9999999999999998 7999999987776655543     211  11     222332222     


Q ss_pred             cCCCeeEEEEcccCC
Q 021391          105 QGRPLNILINNAGIM  119 (313)
Q Consensus       105 ~~g~id~lv~~ag~~  119 (313)
                        ...|++|.+.|..
T Consensus       241 --~~aDvVI~aT~s~  253 (423)
T PRK00045        241 --AEADIVISSTGAP  253 (423)
T ss_pred             --ccCCEEEECCCCC
Confidence              2579999998743

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.72  E-value=0.015  Score=54.32  Aligned_cols=82  Identities=16%  Similarity=0.297  Sum_probs=59.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecC-------------------chhHHHHHHHHHHhCCCCceEEE
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRN-------------------MAAGKDVREAIVKEIPSAKVDAM   85 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~   85 (313)
                      .+++++|+|.|+ ||+|..+++.|+..|. ++++++.+                   ..+.+.+.+.+.+.+|..+++.+
T Consensus        38 ~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~  116 (370)
T PRK05600         38 RLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNAL  116 (370)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEe
Confidence            367788999987 5999999999999998 89998876                   24556666667777676667776


Q ss_pred             EccCCCHHHHHHHHHHHhhcCCCeeEEEEcc
Q 021391           86 ELDVSSLASVRKFASEYNSQGRPLNILINNA  116 (313)
Q Consensus        86 ~~D~s~~~~v~~~~~~~~~~~g~id~lv~~a  116 (313)
                      ...++. +.+..+++       ..|++|.|.
T Consensus       117 ~~~i~~-~~~~~~~~-------~~DlVid~~  139 (370)
T PRK05600        117 RERLTA-ENAVELLN-------GVDLVLDGS  139 (370)
T ss_pred             eeecCH-HHHHHHHh-------CCCEEEECC
Confidence            666653 33333333       467777766

>PRK04148 hypothetical protein; Provisional

Probab=96.72  E-value=0.0041  Score=49.14  Aligned_cols=57  Identities=19%  Similarity=0.168  Sum_probs=46.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHH
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLA   93 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~   93 (313)
                      .+++++++.|.+  .|.++|..|++.|+.|+.++.++...+.+.+        ..+.++..|+.+++
T Consensus        15 ~~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~--------~~~~~v~dDlf~p~   71 (134)
T PRK04148         15 GKNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKK--------LGLNAFVDDLFNPN   71 (134)
T ss_pred             ccCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHH--------hCCeEEECcCCCCC
Confidence            356889999998  7788999999999999999999886555432        24688999999876

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.71  E-value=0.011  Score=53.66  Aligned_cols=78  Identities=22%  Similarity=0.355  Sum_probs=50.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCc-------------------hhHHHHHHHHHHhCCCCceEEEEccCC
Q 021391           31 TAIVTGASSGIGTETARVLALRGV-HVIMAVRNM-------------------AAGKDVREAIVKEIPSAKVDAMELDVS   90 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~D~s   90 (313)
                      +|+|.|+ ||+|..+++.|+..|. ++.++|.+.                   .+.+.+.+.+.+.+|..++..+..+++
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~   79 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK   79 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence            4788886 8999999999999998 799888653                   234444555555555556666666666


Q ss_pred             CHHHHHHHHHHHhhcCCCeeEEEEcc
Q 021391           91 SLASVRKFASEYNSQGRPLNILINNA  116 (313)
Q Consensus        91 ~~~~v~~~~~~~~~~~g~id~lv~~a  116 (313)
                      +......+++       ..|+||.+.
T Consensus        80 ~~~~~~~f~~-------~~DvVv~a~   98 (312)
T cd01489          80 DPDFNVEFFK-------QFDLVFNAL   98 (312)
T ss_pred             CccchHHHHh-------cCCEEEECC
Confidence            5322222322       456666654

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.70  E-value=0.015  Score=51.71  Aligned_cols=119  Identities=18%  Similarity=0.162  Sum_probs=73.1

Q ss_pred             EEEeCCCCchHHHHHHHHHHcC----CEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           32 AIVTGASSGIGTETARVLALRG----VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        32 ~lItGas~giG~aia~~La~~G----~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      +.|.||+|.+|..++..|+..|    .+|++.++++++++....++.......    ....++..++....+       .
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~----~~~~i~~~~d~~~~~-------~   69 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL----ADIKVSITDDPYEAF-------K   69 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc----cCcEEEECCchHHHh-------C
Confidence            4689998899999999999999    689999999888887777765432111    011111111122222       3


Q ss_pred             CeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          108 PLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       108 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                      ..|++|..+|....+.   .. -...+..    ..-+.+.+.+.+.+.    .+++.++++|-...
T Consensus        70 ~aDiVv~t~~~~~~~g---~~-r~~~~~~----n~~i~~~i~~~i~~~----~p~a~~i~~tNP~d  123 (263)
T cd00650          70 DADVVIITAGVGRKPG---MG-RLDLLKR----NVPIVKEIGDNIEKY----SPDAWIIVVSNPVD  123 (263)
T ss_pred             CCCEEEECCCCCCCcC---CC-HHHHHHH----HHHHHHHHHHHHHHH----CCCeEEEEecCcHH
Confidence            6899999998754431   11 1122222    334555555566554    34678888876543

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=96.69  E-value=0.0066  Score=55.29  Aligned_cols=118  Identities=14%  Similarity=0.167  Sum_probs=70.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           31 TAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      ++.|+|++|.+|.++|..|+..|.  .++|.++++  .+....++....  .......+.  +.++.       .+.+..
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~~--~~~~i~~~~--~~~~~-------~~~~~d   67 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHIP--TAASVKGFS--GEEGL-------ENALKG   67 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcCC--cCceEEEec--CCCch-------HHHcCC
Confidence            478999999999999999999886  699999876  221122222211  001111100  00011       122347


Q ss_pred             eeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          109 LNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       109 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                      -|++|.++|....+.    ..-.+.+..|+.    +++.+.+.+.+.    .+++.||++|-..-
T Consensus        68 aDivvitaG~~~~~g----~~R~dll~~N~~----I~~~i~~~i~~~----~p~~iiivvsNPvD  120 (312)
T TIGR01772        68 ADVVVIPAGVPRKPG----MTRDDLFNVNAG----IVKDLVAAVAES----CPKAMILVITNPVN  120 (312)
T ss_pred             CCEEEEeCCCCCCCC----ccHHHHHHHhHH----HHHHHHHHHHHh----CCCeEEEEecCchh
Confidence            899999999754432    233445666665    666666666664    44778888887663

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.69  E-value=0.019  Score=45.94  Aligned_cols=78  Identities=19%  Similarity=0.277  Sum_probs=52.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCc-------------------hhHHHHHHHHHHhCCCCceEEEEccCC
Q 021391           31 TAIVTGASSGIGTETARVLALRGV-HVIMAVRNM-------------------AAGKDVREAIVKEIPSAKVDAMELDVS   90 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~D~s   90 (313)
                      +++|.|+ ||+|..+++.|+..|. ++.+++.+.                   .+.+.+.+.+.+.+|..++..+..++.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            4788887 8999999999999999 788887652                   344555555666666666666666555


Q ss_pred             CHHHHHHHHHHHhhcCCCeeEEEEccc
Q 021391           91 SLASVRKFASEYNSQGRPLNILINNAG  117 (313)
Q Consensus        91 ~~~~v~~~~~~~~~~~g~id~lv~~ag  117 (313)
                      +... ..+       +.+.|++|.+..
T Consensus        80 ~~~~-~~~-------~~~~diVi~~~d   98 (143)
T cd01483          80 EDNL-DDF-------LDGVDLVIDAID   98 (143)
T ss_pred             hhhH-HHH-------hcCCCEEEECCC
Confidence            4322 112       236777777764

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=96.69  E-value=0.014  Score=55.13  Aligned_cols=45  Identities=22%  Similarity=0.290  Sum_probs=39.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHH
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDV   69 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~   69 (313)
                      +..+.|++++|.|++ .||+.+++.+...|++|+++++++.+++.+
T Consensus       197 ~~~l~GktVvViG~G-~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A  241 (413)
T cd00401         197 DVMIAGKVAVVAGYG-DVGKGCAQSLRGQGARVIVTEVDPICALQA  241 (413)
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECChhhHHHH
Confidence            456899999999987 799999999999999999999987765543

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.67  E-value=0.014  Score=49.58  Aligned_cols=80  Identities=20%  Similarity=0.300  Sum_probs=55.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCc-------------------hhHHHHHHHHHHhCCCCceEEEE
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNM-------------------AAGKDVREAIVKEIPSAKVDAME   86 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~   86 (313)
                      +++++|+|.|+ +|+|..+++.|+..|. ++.++|.+.                   .+.+.+.+.+.+.+|..++..+.
T Consensus        19 L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~   97 (197)
T cd01492          19 LRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDT   97 (197)
T ss_pred             HHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEe
Confidence            56788999985 5599999999999999 688887542                   24455566667777766666666


Q ss_pred             ccCCCHHHHHHHHHHHhhcCCCeeEEEEcc
Q 021391           87 LDVSSLASVRKFASEYNSQGRPLNILINNA  116 (313)
Q Consensus        87 ~D~s~~~~v~~~~~~~~~~~g~id~lv~~a  116 (313)
                      ..+++.  ...+++       ..|++|.+.
T Consensus        98 ~~~~~~--~~~~~~-------~~dvVi~~~  118 (197)
T cd01492          98 DDISEK--PEEFFS-------QFDVVVATE  118 (197)
T ss_pred             cCcccc--HHHHHh-------CCCEEEECC
Confidence            555521  223332       568888764

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.66  E-value=0.02  Score=48.62  Aligned_cols=82  Identities=18%  Similarity=0.329  Sum_probs=54.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCc---------------------hhHHHHHHHHHHhCCCCceEE
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNM---------------------AAGKDVREAIVKEIPSAKVDA   84 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~---------------------~~~~~~~~~l~~~~~~~~~~~   84 (313)
                      +++.+|+|.|+++ +|..+++.|+..|. ++.+++.+.                     .+.+.+.+.+.+.+|..+++.
T Consensus        17 L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~   95 (198)
T cd01485          17 LRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSI   95 (198)
T ss_pred             HhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEE
Confidence            5678899998765 99999999999999 588887652                     133344555666666666666


Q ss_pred             EEccCCC-HHHHHHHHHHHhhcCCCeeEEEEcc
Q 021391           85 MELDVSS-LASVRKFASEYNSQGRPLNILINNA  116 (313)
Q Consensus        85 ~~~D~s~-~~~v~~~~~~~~~~~g~id~lv~~a  116 (313)
                      +..++.+ .+....+++       ..|++|.+.
T Consensus        96 ~~~~~~~~~~~~~~~~~-------~~dvVi~~~  121 (198)
T cd01485          96 VEEDSLSNDSNIEEYLQ-------KFTLVIATE  121 (198)
T ss_pred             EecccccchhhHHHHHh-------CCCEEEECC
Confidence            6665542 223333333       567777664

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.66  E-value=0.011  Score=54.68  Aligned_cols=81  Identities=16%  Similarity=0.262  Sum_probs=53.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      -+|+.+||.||++|+|.+.++.....|+..+++.++.++.+ +.+++     +.   -...|..+++-++...+..   .
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~-l~k~l-----GA---d~vvdy~~~~~~e~~kk~~---~  223 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLE-LVKKL-----GA---DEVVDYKDENVVELIKKYT---G  223 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHH-HHHHc-----CC---cEeecCCCHHHHHHHHhhc---C
Confidence            47899999999999999999988889965555555544433 23333     22   2355677744333332221   4


Q ss_pred             CCeeEEEEcccCC
Q 021391          107 RPLNILINNAGIM  119 (313)
Q Consensus       107 g~id~lv~~ag~~  119 (313)
                      +++|+|+.|.|..
T Consensus       224 ~~~DvVlD~vg~~  236 (347)
T KOG1198|consen  224 KGVDVVLDCVGGS  236 (347)
T ss_pred             CCccEEEECCCCC
Confidence            5899999999863

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.65  E-value=0.0052  Score=50.79  Aligned_cols=39  Identities=28%  Similarity=0.342  Sum_probs=35.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM   63 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~   63 (313)
                      .+++||+++|.|++.-+|..+++.|.++|++|.++.|+.
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~   78 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT   78 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence            479999999999977789999999999999999999874

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.65  E-value=0.0085  Score=54.51  Aligned_cols=79  Identities=16%  Similarity=0.279  Sum_probs=52.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      -+|.++||+||++++|.++++.+...|++|+.++++.++.+.+.+ +     +...   ..|-.+.+..+. +.+..  .
T Consensus       142 ~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~-----Ga~~---vi~~~~~~~~~~-v~~~~--~  209 (329)
T cd08294         142 KAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-L-----GFDA---VFNYKTVSLEEA-LKEAA--P  209 (329)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c-----CCCE---EEeCCCccHHHH-HHHHC--C
Confidence            368999999999999999988888899999999988766554422 2     2221   123333322222 22221  1


Q ss_pred             CCeeEEEEccc
Q 021391          107 RPLNILINNAG  117 (313)
Q Consensus       107 g~id~lv~~ag  117 (313)
                      +++|+++.+.|
T Consensus       210 ~gvd~vld~~g  220 (329)
T cd08294         210 DGIDCYFDNVG  220 (329)
T ss_pred             CCcEEEEECCC
Confidence            46999999887

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=96.65  E-value=0.039  Score=50.31  Aligned_cols=118  Identities=13%  Similarity=0.034  Sum_probs=76.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHhCCCC-ceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           30 LTAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKEIPSA-KVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~-~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      .++.|+|+ |.+|.++|..|+..|.  .++|++.+.+.++....++....+-. .......  .|.+.           +
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~~-----------~   69 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYSV-----------T   69 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHHH-----------h
Confidence            57899996 9999999999998876  69999999888777777776543211 1122211  12211           1


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                      ...|++|.++|....+. .+   -...+..|.    -+++.+.+.+.+.    ..++.++++|....
T Consensus        70 ~~adivvitaG~~~k~g-~~---R~dll~~N~----~i~~~~~~~i~~~----~p~~~vivvsNP~d  124 (312)
T cd05293          70 ANSKVVIVTAGARQNEG-ES---RLDLVQRNV----DIFKGIIPKLVKY----SPNAILLVVSNPVD  124 (312)
T ss_pred             CCCCEEEECCCCCCCCC-CC---HHHHHHHHH----HHHHHHHHHHHHh----CCCcEEEEccChHH
Confidence            36899999999764432 12   223344443    3456666666664    44788888887654

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.61  E-value=0.011  Score=56.15  Aligned_cols=74  Identities=20%  Similarity=0.419  Sum_probs=53.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcC-CEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRG-VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      ++.|++++|.|+ |.+|+.+++.|...| .+|++++|+.++.++..+.+     +.  ..+.     .++....+.    
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~-----g~--~~i~-----~~~l~~~l~----  239 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL-----GG--EAVK-----FEDLEEYLA----  239 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc-----CC--eEee-----HHHHHHHHh----
Confidence            488999999997 999999999999999 58999999987766555433     21  1221     123333333    


Q ss_pred             cCCCeeEEEEcccCC
Q 021391          105 QGRPLNILINNAGIM  119 (313)
Q Consensus       105 ~~g~id~lv~~ag~~  119 (313)
                         ..|++|.+.|..
T Consensus       240 ---~aDvVi~aT~s~  251 (417)
T TIGR01035       240 ---EADIVISSTGAP  251 (417)
T ss_pred             ---hCCEEEECCCCC
Confidence               579999997643

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.60  E-value=0.012  Score=53.79  Aligned_cols=72  Identities=22%  Similarity=0.428  Sum_probs=52.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      +.+++++|.|+ |.+|+.+++.|...|. +|++++|+.++.++..+++     +.  ..+     +.++....+.     
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~-----g~--~~~-----~~~~~~~~l~-----  237 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL-----GG--NAV-----PLDELLELLN-----  237 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc-----CC--eEE-----eHHHHHHHHh-----
Confidence            78999999998 9999999999999775 7999999988777665543     22  122     2223333332     


Q ss_pred             CCCeeEEEEcccC
Q 021391          106 GRPLNILINNAGI  118 (313)
Q Consensus       106 ~g~id~lv~~ag~  118 (313)
                        ..|++|.+.+.
T Consensus       238 --~aDvVi~at~~  248 (311)
T cd05213         238 --EADVVISATGA  248 (311)
T ss_pred             --cCCEEEECCCC
Confidence              47999999874

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.59  E-value=0.016  Score=52.16  Aligned_cols=80  Identities=21%  Similarity=0.382  Sum_probs=53.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      .+|++++|+|+++++|.++++.+...|++|+++.++.+..+.+ .++     +...   ..+..+.+....+... .. .
T Consensus       138 ~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~~---~~~~~~~~~~~~~~~~-~~-~  206 (325)
T TIGR02824       138 KAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EAL-----GADI---AINYREEDFVEVVKAE-TG-G  206 (325)
T ss_pred             CCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCcE---EEecCchhHHHHHHHH-cC-C
Confidence            3689999999999999999999999999999999887655432 221     2211   1233333333332222 11 1


Q ss_pred             CCeeEEEEccc
Q 021391          107 RPLNILINNAG  117 (313)
Q Consensus       107 g~id~lv~~ag  117 (313)
                      +++|++++++|
T Consensus       207 ~~~d~~i~~~~  217 (325)
T TIGR02824       207 KGVDVILDIVG  217 (325)
T ss_pred             CCeEEEEECCc
Confidence            36999999987

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.59  E-value=0.0038  Score=59.81  Aligned_cols=77  Identities=18%  Similarity=0.129  Sum_probs=52.5

Q ss_pred             CCCCCEEEEeCC----------------CCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccC
Q 021391           26 DGTGLTAIVTGA----------------SSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDV   89 (313)
Q Consensus        26 ~~~gk~~lItGa----------------s~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~   89 (313)
                      +|+||++|||+|                ||-+|+++|+.++.+|++|+++.-... .         .. ...+.++  ++
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~---------~~-p~~v~~i--~V  319 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-L---------AD-PQGVKVI--HV  319 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-C---------CC-CCCceEE--Ee
Confidence            589999999987                467999999999999999999863321 0         01 2234443  33


Q ss_pred             CCHHHHHHHHHHHhhcCCCeeEEEEcccCC
Q 021391           90 SSLASVRKFASEYNSQGRPLNILINNAGIM  119 (313)
Q Consensus        90 s~~~~v~~~~~~~~~~~g~id~lv~~ag~~  119 (313)
                      .+..++.+.+   .+.+. .|++|++|.+.
T Consensus       320 ~ta~eM~~av---~~~~~-~Di~I~aAAVa  345 (475)
T PRK13982        320 ESARQMLAAV---EAALP-ADIAIFAAAVA  345 (475)
T ss_pred             cCHHHHHHHH---HhhCC-CCEEEEecccc
Confidence            4444444444   33343 69999999875

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.59  E-value=0.0053  Score=59.36  Aligned_cols=48  Identities=21%  Similarity=0.272  Sum_probs=41.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHH
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREA   72 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~   72 (313)
                      ..++.+|+++|+|+ ||+|++++..|++.|++|++++|+.++.++..+.
T Consensus       327 ~~~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~  374 (477)
T PRK09310        327 NIPLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASR  374 (477)
T ss_pred             CCCcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            45678999999996 6999999999999999999999998777665543

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=96.49  E-value=0.016  Score=55.36  Aligned_cols=42  Identities=21%  Similarity=0.274  Sum_probs=37.2

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhH
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAG   66 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~   66 (313)
                      +..+.||+++|.|.+ .||+.+|+.|...|++|+++.+++...
T Consensus       249 ~~~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~a  290 (476)
T PTZ00075        249 DVMIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPICA  290 (476)
T ss_pred             CCCcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence            467999999999987 599999999999999999998886554

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=96.48  E-value=0.055  Score=51.53  Aligned_cols=118  Identities=14%  Similarity=0.102  Sum_probs=77.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc-------CC--EEEEEecCchhHHHHHHHHHHhC-CC-CceEEEEccCCCHHHHHHH
Q 021391           30 LTAIVTGASSGIGTETARVLALR-------GV--HVIMAVRNMAAGKDVREAIVKEI-PS-AKVDAMELDVSSLASVRKF   98 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~-------G~--~V~l~~r~~~~~~~~~~~l~~~~-~~-~~~~~~~~D~s~~~~v~~~   98 (313)
                      -+|.|+|++|.+|.+++..|+..       |.  ++++.+++.++++...-++.... +- .++. +..  .+.+     
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~-i~~--~~ye-----  172 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVS-IGI--DPYE-----  172 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceE-Eec--CCHH-----
Confidence            46899999999999999999988       65  79999999999988888887643 11 1111 111  1211     


Q ss_pred             HHHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391           99 ASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus        99 ~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                            .+...|++|..+|....+.    +.-.+.++.|..    +.+...+.+.+..   +.++.||++|-..
T Consensus       173 ------~~kdaDiVVitAG~prkpG----~tR~dLl~~N~~----I~k~i~~~I~~~a---~p~~ivIVVsNPv  229 (444)
T PLN00112        173 ------VFQDAEWALLIGAKPRGPG----MERADLLDINGQ----IFAEQGKALNEVA---SRNVKVIVVGNPC  229 (444)
T ss_pred             ------HhCcCCEEEECCCCCCCCC----CCHHHHHHHHHH----HHHHHHHHHHHhc---CCCeEEEEcCCcH
Confidence                  1246899999999754321    233445566655    4445555555411   3477888888654

>PLN02494 adenosylhomocysteinase

Probab=96.48  E-value=0.021  Score=54.54  Aligned_cols=43  Identities=19%  Similarity=0.275  Sum_probs=37.7

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHH
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGK   67 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~   67 (313)
                      +..+.||+++|.|.+ .||+.+|+.+...|++|+++++++.+..
T Consensus       249 ~i~LaGKtVvViGyG-~IGr~vA~~aka~Ga~VIV~e~dp~r~~  291 (477)
T PLN02494        249 DVMIAGKVAVICGYG-DVGKGCAAAMKAAGARVIVTEIDPICAL  291 (477)
T ss_pred             CCccCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhhH
Confidence            455899999999987 8999999999999999999999875543

>PRK14851 hypothetical protein; Provisional

Probab=96.46  E-value=0.023  Score=57.10  Aligned_cols=83  Identities=10%  Similarity=0.193  Sum_probs=61.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecC-------------------chhHHHHHHHHHHhCCCCceEEE
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRN-------------------MAAGKDVREAIVKEIPSAKVDAM   85 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~   85 (313)
                      .+++++|+|.| .||+|..++..|+..|. ++++++.+                   ..|.+.+.+.+.+.+|..+++.+
T Consensus        40 kL~~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~  118 (679)
T PRK14851         40 RLAEAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPF  118 (679)
T ss_pred             HHhcCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEE
Confidence            36789999998 67999999999999998 78887764                   23555566666777777778888


Q ss_pred             EccCCCHHHHHHHHHHHhhcCCCeeEEEEccc
Q 021391           86 ELDVSSLASVRKFASEYNSQGRPLNILINNAG  117 (313)
Q Consensus        86 ~~D~s~~~~v~~~~~~~~~~~g~id~lv~~ag  117 (313)
                      ...++. +.+..+++       ++|+||.+.-
T Consensus       119 ~~~i~~-~n~~~~l~-------~~DvVid~~D  142 (679)
T PRK14851        119 PAGINA-DNMDAFLD-------GVDVVLDGLD  142 (679)
T ss_pred             ecCCCh-HHHHHHHh-------CCCEEEECCC
Confidence            777764 44555555       5788886653

>PLN02602 lactate dehydrogenase

Probab=96.43  E-value=0.13  Score=47.72  Aligned_cols=118  Identities=14%  Similarity=0.095  Sum_probs=75.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHhCCC-CceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           30 LTAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKEIPS-AKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      +++.|+|+ |.+|.++|..|+..|.  .++|.+.+.++++....++....+- ....+ ..+ .+.+       +    .
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i-~~~-~dy~-------~----~  103 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKI-LAS-TDYA-------V----T  103 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEE-EeC-CCHH-------H----h
Confidence            69999996 9999999999998876  6999999988887777777654210 11211 111 1211       1    2


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                      ..-|++|.+||....+. .+   -.+.+..|.    -+++.+.+.+.++    ..++.+|++|-...
T Consensus       104 ~daDiVVitAG~~~k~g-~t---R~dll~~N~----~I~~~i~~~I~~~----~p~~ivivvtNPvd  158 (350)
T PLN02602        104 AGSDLCIVTAGARQIPG-ES---RLNLLQRNV----ALFRKIIPELAKY----SPDTILLIVSNPVD  158 (350)
T ss_pred             CCCCEEEECCCCCCCcC-CC---HHHHHHHHH----HHHHHHHHHHHHH----CCCeEEEEecCchH
Confidence            36899999999764432 12   223333443    4556666666664    44678888886543

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.42  E-value=0.013  Score=56.15  Aligned_cols=73  Identities=18%  Similarity=0.186  Sum_probs=51.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      +.++|.|+ |.+|+++++.|.++|..|++++++.+..+...+.       ..+.++..|.++....+.+      .....
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~-------~~~~~~~gd~~~~~~l~~~------~~~~a   66 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDR-------LDVRTVVGNGSSPDVLREA------GAEDA   66 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh-------cCEEEEEeCCCCHHHHHHc------CCCcC
Confidence            36888887 9999999999999999999999998776654321       2356667777776654433      01245


Q ss_pred             eEEEEcc
Q 021391          110 NILINNA  116 (313)
Q Consensus       110 d~lv~~a  116 (313)
                      |.+|.+.
T Consensus        67 ~~vi~~~   73 (453)
T PRK09496         67 DLLIAVT   73 (453)
T ss_pred             CEEEEec
Confidence            5555554

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=96.42  E-value=0.15  Score=46.77  Aligned_cols=123  Identities=13%  Similarity=0.151  Sum_probs=73.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhC--CCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEI--PSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      +.+++.|.|| |.+|..++..++..|. .|++++.+++.+....-.+....  .+.......  .+|.+   +       
T Consensus         5 ~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d~~---~-------   71 (321)
T PTZ00082          5 KRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNNYE---D-------   71 (321)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCCHH---H-------
Confidence            4578999995 7899999999999995 89999998876533222222211  011112211  02211   1       


Q ss_pred             cCCCeeEEEEcccCCCCCCccCcc--chhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          105 QGRPLNILINNAGIMASPFMLSKD--NIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~~~~~~--~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                       ...-|++|.++|....+.. +.-  .....+..|+    .+.+.+.+.+.+.    .+++.++++|-...
T Consensus        72 -l~~aDiVI~tag~~~~~~~-~~~~~~r~~~l~~n~----~i~~~i~~~i~~~----~p~a~~iv~sNP~d  132 (321)
T PTZ00082         72 -IAGSDVVIVTAGLTKRPGK-SDKEWNRDDLLPLNA----KIMDEVAEGIKKY----CPNAFVIVITNPLD  132 (321)
T ss_pred             -hCCCCEEEECCCCCCCCCC-CcCCCCHHHHHHHHH----HHHHHHHHHHHHH----CCCeEEEEecCcHH
Confidence             1368999999997654321 111  1233444453    4667777777765    33567777776553

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=96.41  E-value=0.082  Score=48.80  Aligned_cols=41  Identities=22%  Similarity=0.222  Sum_probs=36.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHH
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDV   69 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~   69 (313)
                      .|.+++|.|+ +++|..++..+...|++|++++++.++.+.+
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~  206 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM  206 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            5899999999 9999999999889999999999988776543

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.40  E-value=0.031  Score=54.17  Aligned_cols=83  Identities=18%  Similarity=0.177  Sum_probs=56.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCC-------------HH
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSS-------------LA   93 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~-------------~~   93 (313)
                      ..+.+++|.|+ |.+|...+..+...|++|++++++.+..+... ++       ...++..|..+             .+
T Consensus       162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~-~l-------Ga~~v~v~~~e~g~~~~gYa~~~s~~  232 (511)
T TIGR00561       162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SM-------GAEFLELDFKEEGGSGDGYAKVMSEE  232 (511)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-------CCeEEeccccccccccccceeecCHH
Confidence            45689999996 89999999999999999999999887654332 22       23444555422             22


Q ss_pred             HHHHHHHHHhhcCCCeeEEEEcccC
Q 021391           94 SVRKFASEYNSQGRPLNILINNAGI  118 (313)
Q Consensus        94 ~v~~~~~~~~~~~g~id~lv~~ag~  118 (313)
                      ..+...+.+.+.....|++|+++-+
T Consensus       233 ~~~~~~~~~~e~~~~~DIVI~Tali  257 (511)
T TIGR00561       233 FIAAEMELFAAQAKEVDIIITTALI  257 (511)
T ss_pred             HHHHHHHHHHHHhCCCCEEEECccc
Confidence            3333333344444579999999943

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.39  E-value=0.011  Score=47.19  Aligned_cols=42  Identities=21%  Similarity=0.272  Sum_probs=38.3

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCch
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMA   64 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~   64 (313)
                      ..++++||.++|.|.+.-+|+.++..|.++|++|.++.++..
T Consensus        22 ~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~   63 (140)
T cd05212          22 EGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI   63 (140)
T ss_pred             cCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc
Confidence            467899999999999999999999999999999999987654

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=96.39  E-value=0.027  Score=51.10  Aligned_cols=42  Identities=26%  Similarity=0.390  Sum_probs=36.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHH
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDV   69 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~   69 (313)
                      .+.+++|.|+++++|.+++......|++|+.++++.++.+.+
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  187 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL  187 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence            468999999999999999999999999999999887765544

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.38  E-value=0.031  Score=48.75  Aligned_cols=77  Identities=23%  Similarity=0.358  Sum_probs=49.0

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCC-EEEEEecCch-------------------hHHHHHHHHHHhCCCCceEEEEccCCC
Q 021391           32 AIVTGASSGIGTETARVLALRGV-HVIMAVRNMA-------------------AGKDVREAIVKEIPSAKVDAMELDVSS   91 (313)
Q Consensus        32 ~lItGas~giG~aia~~La~~G~-~V~l~~r~~~-------------------~~~~~~~~l~~~~~~~~~~~~~~D~s~   91 (313)
                      ++|.| .||+|..+++.|+..|. ++.++|.+.=                   +.+.+.+.+.+.+|..++..+..++++
T Consensus         2 VlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~~   80 (234)
T cd01484           2 VLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVGP   80 (234)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCCh
Confidence            67777 67999999999999998 7888887532                   333444445555555566666666654


Q ss_pred             HHHH-HHHHHHHhhcCCCeeEEEEcc
Q 021391           92 LASV-RKFASEYNSQGRPLNILINNA  116 (313)
Q Consensus        92 ~~~v-~~~~~~~~~~~g~id~lv~~a  116 (313)
                      .... ..++       ...|++|.+.
T Consensus        81 ~~~~~~~f~-------~~~DvVi~a~   99 (234)
T cd01484          81 EQDFNDTFF-------EQFHIIVNAL   99 (234)
T ss_pred             hhhchHHHH-------hCCCEEEECC
Confidence            3221 1222       2467777664

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PRK07877 hypothetical protein; Provisional

Probab=96.38  E-value=0.021  Score=57.68  Aligned_cols=80  Identities=20%  Similarity=0.232  Sum_probs=62.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCc------------------hhHHHHHHHHHHhCCCCceEEEE
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV--HVIMAVRNM------------------AAGKDVREAIVKEIPSAKVDAME   86 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~--~V~l~~r~~------------------~~~~~~~~~l~~~~~~~~~~~~~   86 (313)
                      +++++|+|.|+ | +|..++..|+..|.  ++++++.+.                  .|.+.+.+.+.+.+|..+++.+.
T Consensus       105 L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~  182 (722)
T PRK07877        105 LGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFT  182 (722)
T ss_pred             HhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEe
Confidence            68899999999 3 99999999999994  899987752                  35566666777777777888888


Q ss_pred             ccCCCHHHHHHHHHHHhhcCCCeeEEEEcc
Q 021391           87 LDVSSLASVRKFASEYNSQGRPLNILINNA  116 (313)
Q Consensus        87 ~D~s~~~~v~~~~~~~~~~~g~id~lv~~a  116 (313)
                      ..++ .+.++++++       ++|+||.|.
T Consensus       183 ~~i~-~~n~~~~l~-------~~DlVvD~~  204 (722)
T PRK07877        183 DGLT-EDNVDAFLD-------GLDVVVEEC  204 (722)
T ss_pred             ccCC-HHHHHHHhc-------CCCEEEECC
Confidence            8887 455666655       578888876

>PLN00203 glutamyl-tRNA reductase

Probab=96.35  E-value=0.017  Score=56.22  Aligned_cols=77  Identities=14%  Similarity=0.248  Sum_probs=54.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      ++.+++++|.|+ |++|+.+++.|...|+ +|+++.|+.++.+...+++    ++..+.+  .++   ++...++.    
T Consensus       263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~----~g~~i~~--~~~---~dl~~al~----  328 (519)
T PLN00203        263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF----PDVEIIY--KPL---DEMLACAA----  328 (519)
T ss_pred             CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh----CCCceEe--ecH---hhHHHHHh----
Confidence            388999999999 9999999999999997 7999999988877665543    2212211  122   22333333    


Q ss_pred             cCCCeeEEEEcccCC
Q 021391          105 QGRPLNILINNAGIM  119 (313)
Q Consensus       105 ~~g~id~lv~~ag~~  119 (313)
                         ..|+||.+.+..
T Consensus       329 ---~aDVVIsAT~s~  340 (519)
T PLN00203        329 ---EADVVFTSTSSE  340 (519)
T ss_pred             ---cCCEEEEccCCC
Confidence               579999987643

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.34  E-value=0.017  Score=60.39  Aligned_cols=78  Identities=26%  Similarity=0.345  Sum_probs=61.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcC-CE-------------EEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCH
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRG-VH-------------VIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSL   92 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G-~~-------------V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~   92 (313)
                      -..|+|+|.|| |.+|+.+++.|++.. +.             |.+++++.+.++++.+.    ++  ++..+++|++|.
T Consensus       567 ~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~----~~--~~~~v~lDv~D~  639 (1042)
T PLN02819        567 KKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEG----IE--NAEAVQLDVSDS  639 (1042)
T ss_pred             ccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHh----cC--CCceEEeecCCH
Confidence            34689999997 999999999999763 23             88888887776655543    22  467899999999


Q ss_pred             HHHHHHHHHHhhcCCCeeEEEEcccC
Q 021391           93 ASVRKFASEYNSQGRPLNILINNAGI  118 (313)
Q Consensus        93 ~~v~~~~~~~~~~~g~id~lv~~ag~  118 (313)
                      +++.++++       .+|+||++...
T Consensus       640 e~L~~~v~-------~~DaVIsalP~  658 (1042)
T PLN02819        640 ESLLKYVS-------QVDVVISLLPA  658 (1042)
T ss_pred             HHHHHhhc-------CCCEEEECCCc
Confidence            88777666       58999999864

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=96.34  E-value=0.032  Score=51.14  Aligned_cols=118  Identities=14%  Similarity=0.071  Sum_probs=71.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-------EEEEEecCc--hhHHHHHHHHHHhC-CCC-ceEEEEccCCCHHHHHHH
Q 021391           30 LTAIVTGASSGIGTETARVLALRGV-------HVIMAVRNM--AAGKDVREAIVKEI-PSA-KVDAMELDVSSLASVRKF   98 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~-------~V~l~~r~~--~~~~~~~~~l~~~~-~~~-~~~~~~~D~s~~~~v~~~   98 (313)
                      -++.|+||+|++|.+++..|+..|.       .++|.+.+.  ++++....++.... +.. ...     ++. +.    
T Consensus         4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-----i~~-~~----   73 (323)
T TIGR01759         4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVV-----ATT-DP----   73 (323)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcE-----Eec-Ch----
Confidence            4689999999999999999998885       699999864  44555555555432 100 111     110 11    


Q ss_pred             HHHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391           99 ASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus        99 ~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                          .+.....|++|.+||....+.    +.-.+.+..|+.    +++.+.+.+.+.+   .+++.++++|-..
T Consensus        74 ----~~~~~daDvVVitAG~~~k~g----~tR~dll~~Na~----i~~~i~~~i~~~~---~~~~iiivvsNPv  132 (323)
T TIGR01759        74 ----EEAFKDVDAALLVGAFPRKPG----MERADLLSKNGK----IFKEQGKALNKVA---KKDVKVLVVGNPA  132 (323)
T ss_pred             ----HHHhCCCCEEEEeCCCCCCCC----CcHHHHHHHHHH----HHHHHHHHHHhhC---CCCeEEEEeCCcH
Confidence                111236899999999754321    233344555554    4555566666542   1267788887543

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=96.31  E-value=0.066  Score=48.71  Aligned_cols=117  Identities=15%  Similarity=0.170  Sum_probs=76.4

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHhCC--C-CceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           32 AIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKEIP--S-AKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        32 ~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~~~--~-~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      +.|.|+ |.+|..+|..|+.+|.  .++|.+.+.+.++.....|....+  . ..+.....|   .+       +    .
T Consensus         2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~---y~-------~----~   66 (307)
T cd05290           2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD---YD-------D----C   66 (307)
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC---HH-------H----h
Confidence            678898 9999999999999886  699999998888777777765322  1 123333322   11       1    2


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                      ..-|++|.+||....+. .+.+ -.+.+..|.    .+++.+.+.+.++    ..++.++++|-..-
T Consensus        67 ~~aDivvitaG~~~kpg-~tr~-R~dll~~N~----~I~~~i~~~i~~~----~p~~i~ivvsNPvD  123 (307)
T cd05290          67 ADADIIVITAGPSIDPG-NTDD-RLDLAQTNA----KIIREIMGNITKV----TKEAVIILITNPLD  123 (307)
T ss_pred             CCCCEEEECCCCCCCCC-CCch-HHHHHHHHH----HHHHHHHHHHHHh----CCCeEEEEecCcHH
Confidence            36899999999864432 2211 233344443    4667777777775    34677777776543

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14967 putative methyltransferase; Provisional

Probab=96.27  E-value=0.14  Score=44.22  Aligned_cols=97  Identities=18%  Similarity=0.236  Sum_probs=59.7

Q ss_pred             CCCCCCCCCccchhccCC---C-CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCce
Q 021391            8 GPSGFSASSTAEEVTQGI---D-GTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKV   82 (313)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~---~-~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~   82 (313)
                      .+..|++....+.....+   . -.+.++|-.|++.|.   ++..+++.|+ +|+.++.++...+.+.+.+...  +.++
T Consensus        12 ~~g~~~p~~ds~~l~~~l~~~~~~~~~~vLDlGcG~G~---~~~~la~~~~~~v~~vD~s~~~l~~a~~n~~~~--~~~~   86 (223)
T PRK14967         12 APGVYRPQEDTQLLADALAAEGLGPGRRVLDLCTGSGA---LAVAAAAAGAGSVTAVDISRRAVRSARLNALLA--GVDV   86 (223)
T ss_pred             CCCCcCCCCcHHHHHHHHHhcccCCCCeEEEecCCHHH---HHHHHHHcCCCeEEEEECCHHHHHHHHHHHHHh--CCee
Confidence            344455554443332222   1 346899999998764   3455666676 8999999987776655544433  3356


Q ss_pred             EEEEccCCCHHHHHHHHHHHhhcCCCeeEEEEcccCCC
Q 021391           83 DAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMA  120 (313)
Q Consensus        83 ~~~~~D~s~~~~v~~~~~~~~~~~g~id~lv~~ag~~~  120 (313)
                      .++..|+.+.      +     ..+..|+++.|..+..
T Consensus        87 ~~~~~d~~~~------~-----~~~~fD~Vi~npPy~~  113 (223)
T PRK14967         87 DVRRGDWARA------V-----EFRPFDVVVSNPPYVP  113 (223)
T ss_pred             EEEECchhhh------c-----cCCCeeEEEECCCCCC
Confidence            7777776541      1     1247999999986543

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.27  E-value=0.056  Score=46.63  Aligned_cols=42  Identities=21%  Similarity=0.328  Sum_probs=37.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHH
Q 021391           31 TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREA   72 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~   72 (313)
                      ++.|.||+|.+|.++++.|++.|++|++.+|+.++.+...+.
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~   43 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK   43 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence            589999999999999999999999999999998877665544

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.26  E-value=0.019  Score=51.72  Aligned_cols=80  Identities=19%  Similarity=0.320  Sum_probs=52.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      .++++++|+|+++++|.+++..+...|++|++++++.++.+.+ .++     +. -..+  |.........+.+ ... .
T Consensus       143 ~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~-----g~-~~~~--~~~~~~~~~~~~~-~~~-~  211 (328)
T cd08268         143 RPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LAL-----GA-AHVI--VTDEEDLVAEVLR-ITG-G  211 (328)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc-----CC-CEEE--ecCCccHHHHHHH-HhC-C
Confidence            3678999999999999999999999999999999887665543 221     22 1222  2222222222222 211 2


Q ss_pred             CCeeEEEEccc
Q 021391          107 RPLNILINNAG  117 (313)
Q Consensus       107 g~id~lv~~ag  117 (313)
                      .++|+++++.|
T Consensus       212 ~~~d~vi~~~~  222 (328)
T cd08268         212 KGVDVVFDPVG  222 (328)
T ss_pred             CCceEEEECCc
Confidence            26999999987

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=96.24  E-value=0.069  Score=48.41  Aligned_cols=119  Identities=15%  Similarity=0.191  Sum_probs=73.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHhCCCC-ceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           30 LTAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKEIPSA-KVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~-~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      +.|.|+|| |++|.+++..|+.++.  .+++.+.+.+..+....++....+.. .-..+..| .+.+           .+
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y~-----------~~   67 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDYE-----------DL   67 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CChh-----------hh
Confidence            46889999 9999999999988875  69999999776666665655432111 11222222 1111           12


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                      ..-|++|-.||....|.    ..-.+.++.|..    +.+.+.+.+.+.    ..++.++++|-..-
T Consensus        68 ~~aDiVvitAG~prKpG----mtR~DLl~~Na~----I~~~i~~~i~~~----~~d~ivlVvtNPvD  122 (313)
T COG0039          68 KGADIVVITAGVPRKPG----MTRLDLLEKNAK----IVKDIAKAIAKY----APDAIVLVVTNPVD  122 (313)
T ss_pred             cCCCEEEEeCCCCCCCC----CCHHHHHHhhHH----HHHHHHHHHHhh----CCCeEEEEecCcHH
Confidence            36899999999876544    222334555554    444455555554    33577777776543

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=96.22  E-value=0.04  Score=50.48  Aligned_cols=79  Identities=18%  Similarity=0.185  Sum_probs=52.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCE-EEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVH-VIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~-V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      ..|.+++|+|+ +++|..++..+...|++ |++++++.++.+.+ +++     +..   ...|..+.+ .+.+.+ +. .
T Consensus       162 ~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~-----ga~---~~i~~~~~~-~~~~~~-~~-~  228 (339)
T cd08239         162 SGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KAL-----GAD---FVINSGQDD-VQEIRE-LT-S  228 (339)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh-----CCC---EEEcCCcch-HHHHHH-Hh-C
Confidence            35899999986 89999999988899998 99998887765543 333     221   123433333 333322 11 1


Q ss_pred             CCCeeEEEEcccC
Q 021391          106 GRPLNILINNAGI  118 (313)
Q Consensus       106 ~g~id~lv~~ag~  118 (313)
                      ..++|++|.+.|.
T Consensus       229 ~~~~d~vid~~g~  241 (339)
T cd08239         229 GAGADVAIECSGN  241 (339)
T ss_pred             CCCCCEEEECCCC
Confidence            2269999999873

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PRK05442 malate dehydrogenase; Provisional

Probab=96.21  E-value=0.022  Score=52.29  Aligned_cols=118  Identities=16%  Similarity=0.092  Sum_probs=70.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-------EEEEEecCc--hhHHHHHHHHHHhC-CC-CceEEEEccCCCHHHHHHH
Q 021391           30 LTAIVTGASSGIGTETARVLALRGV-------HVIMAVRNM--AAGKDVREAIVKEI-PS-AKVDAMELDVSSLASVRKF   98 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~-------~V~l~~r~~--~~~~~~~~~l~~~~-~~-~~~~~~~~D~s~~~~v~~~   98 (313)
                      +++.|+||+|.+|..++..|+..|.       .++|.+.+.  ++++....++.... +. ..+..     +.       
T Consensus         5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i-----~~-------   72 (326)
T PRK05442          5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVI-----TD-------   72 (326)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEE-----ec-------
Confidence            5889999999999999999998765       699999854  23444444443321 10 01111     10       


Q ss_pred             HHHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391           99 ASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus        99 ~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                        .-.+.+..-|++|.+||....+    -+.-.+.+..|..    +++.+.+.+.+++   ..++.+|++|-..
T Consensus        73 --~~y~~~~daDiVVitaG~~~k~----g~tR~dll~~Na~----i~~~i~~~i~~~~---~~~~iiivvsNPv  133 (326)
T PRK05442         73 --DPNVAFKDADVALLVGARPRGP----GMERKDLLEANGA----IFTAQGKALNEVA---ARDVKVLVVGNPA  133 (326)
T ss_pred             --ChHHHhCCCCEEEEeCCCCCCC----CCcHHHHHHHHHH----HHHHHHHHHHHhC---CCCeEEEEeCCch
Confidence              0112234689999999975443    1233444555544    5566666666632   2367888887544

>PRK07411 hypothetical protein; Validated

Probab=96.20  E-value=0.038  Score=52.06  Aligned_cols=82  Identities=17%  Similarity=0.301  Sum_probs=57.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCc-------------------hhHHHHHHHHHHhCCCCceEEE
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNM-------------------AAGKDVREAIVKEIPSAKVDAM   85 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~   85 (313)
                      .++..+|+|.|+ ||+|..+++.|+..|. +++++|.+.                   .+.+.+.+.+.+.+|..++..+
T Consensus        35 ~L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~  113 (390)
T PRK07411         35 RLKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLY  113 (390)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEE
Confidence            367789999987 5899999999999998 788887652                   3555666777777777777777


Q ss_pred             EccCCCHHHHHHHHHHHhhcCCCeeEEEEcc
Q 021391           86 ELDVSSLASVRKFASEYNSQGRPLNILINNA  116 (313)
Q Consensus        86 ~~D~s~~~~v~~~~~~~~~~~g~id~lv~~a  116 (313)
                      ...++.. ....++.       ..|+||.+.
T Consensus       114 ~~~~~~~-~~~~~~~-------~~D~Vvd~~  136 (390)
T PRK07411        114 ETRLSSE-NALDILA-------PYDVVVDGT  136 (390)
T ss_pred             ecccCHH-hHHHHHh-------CCCEEEECC
Confidence            6666653 2333332       456666664

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.20  E-value=0.27  Score=43.09  Aligned_cols=80  Identities=21%  Similarity=0.333  Sum_probs=56.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .|.++||--|.||+|..+++.+-..|++++.+..+.++.+.+.+     + +.   -+..|.+.++-++++.+ + ....
T Consensus       146 pGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~ake-----n-G~---~h~I~y~~eD~v~~V~k-i-TngK  214 (336)
T KOG1197|consen  146 PGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKE-----N-GA---EHPIDYSTEDYVDEVKK-I-TNGK  214 (336)
T ss_pred             CCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHh-----c-CC---cceeeccchhHHHHHHh-c-cCCC
Confidence            68999999999999999999999999999999888776554432     1 21   23456666554444333 1 1223


Q ss_pred             CeeEEEEcccC
Q 021391          108 PLNILINNAGI  118 (313)
Q Consensus       108 ~id~lv~~ag~  118 (313)
                      ++|++.-..|.
T Consensus       215 GVd~vyDsvG~  225 (336)
T KOG1197|consen  215 GVDAVYDSVGK  225 (336)
T ss_pred             Cceeeeccccc
Confidence            79999888874

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.18  E-value=0.023  Score=43.50  Aligned_cols=71  Identities=18%  Similarity=0.275  Sum_probs=52.6

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCeeE
Q 021391           32 AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNI  111 (313)
Q Consensus        32 ~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~id~  111 (313)
                      ++|.|.+ .+|+.+++.|.+.+.+|++++++++..+...+.        .+.++..|.++++..+++--      ...+.
T Consensus         1 vvI~G~g-~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~--------~~~~i~gd~~~~~~l~~a~i------~~a~~   65 (116)
T PF02254_consen    1 VVIIGYG-RIGREIAEQLKEGGIDVVVIDRDPERVEELREE--------GVEVIYGDATDPEVLERAGI------EKADA   65 (116)
T ss_dssp             EEEES-S-HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT--------TSEEEES-TTSHHHHHHTTG------GCESE
T ss_pred             eEEEcCC-HHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc--------ccccccccchhhhHHhhcCc------cccCE
Confidence            4677774 799999999999888999999998776655432        37799999999987655522      26777


Q ss_pred             EEEccc
Q 021391          112 LINNAG  117 (313)
Q Consensus       112 lv~~ag  117 (313)
                      +|...+
T Consensus        66 vv~~~~   71 (116)
T PF02254_consen   66 VVILTD   71 (116)
T ss_dssp             EEEESS
T ss_pred             EEEccC
Confidence            777764

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.14  E-value=0.054  Score=44.42  Aligned_cols=87  Identities=22%  Similarity=0.195  Sum_probs=58.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCC-----CCceEEEEccCCCHHHHHHHHHH--H
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIP-----SAKVDAMELDVSSLASVRKFASE--Y  102 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~~D~s~~~~v~~~~~~--~  102 (313)
                      +++-+.|- |-+|..+|+.|++.|++|.+.+|+.++.++..+.-.....     -....++..-+.+.+++++++..  +
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i   80 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI   80 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred             CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence            46667776 7999999999999999999999998887776543110000     01345677778888888888887  6


Q ss_pred             hhcCCCeeEEEEccc
Q 021391          103 NSQGRPLNILINNAG  117 (313)
Q Consensus       103 ~~~~g~id~lv~~ag  117 (313)
                      .....+=.++|++..
T Consensus        81 ~~~l~~g~iiid~sT   95 (163)
T PF03446_consen   81 LAGLRPGKIIIDMST   95 (163)
T ss_dssp             GGGS-TTEEEEE-SS
T ss_pred             hhccccceEEEecCC
Confidence            665544466666654

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=96.12  E-value=0.2  Score=45.50  Aligned_cols=116  Identities=17%  Similarity=0.164  Sum_probs=73.0

Q ss_pred             EEEeCCCCchHHHHHHHHHHcC--CEEEEEecCchhHHHHHHHHHHhCCC-CceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           32 AIVTGASSGIGTETARVLALRG--VHVIMAVRNMAAGKDVREAIVKEIPS-AKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        32 ~lItGas~giG~aia~~La~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      +.|.|+ |++|.+++..|+..|  ..+++.+++.+.++....++....+. ........  .+.+    .       ...
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~~~----~-------l~~   66 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GDYA----D-------AAD   66 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CCHH----H-------hCC
Confidence            357887 579999999999998  57999999998888777777654321 11122211  1211    1       236


Q ss_pred             eeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          109 LNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       109 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                      -|++|.++|....+.    ..-...+..|+    -+++.+.+.+.++    .+++.++++|....
T Consensus        67 aDiVIitag~p~~~~----~~R~~l~~~n~----~i~~~~~~~i~~~----~p~~~viv~sNP~d  119 (300)
T cd00300          67 ADIVVITAGAPRKPG----ETRLDLINRNA----PILRSVITNLKKY----GPDAIILVVSNPVD  119 (300)
T ss_pred             CCEEEEcCCCCCCCC----CCHHHHHHHHH----HHHHHHHHHHHHh----CCCeEEEEccChHH
Confidence            899999999754322    12223333343    4555556665554    45788888887654

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>cd08230 glucose_DH Glucose dehydrogenase

Probab=96.08  E-value=0.064  Score=49.63  Aligned_cols=74  Identities=26%  Similarity=0.319  Sum_probs=48.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecC---chhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRN---MAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      ..|++++|+|+ |++|...+..+...|++|++++|+   .++.+ ..+++     +..  .  .|..+.+ +..    . 
T Consensus       171 ~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~-~~~~~-----Ga~--~--v~~~~~~-~~~----~-  233 (355)
T cd08230         171 WNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKAD-IVEEL-----GAT--Y--VNSSKTP-VAE----V-  233 (355)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHc-----CCE--E--ecCCccc-hhh----h-
Confidence            36899999986 999999998888889999999984   33333 22222     222  2  2333322 221    1 


Q ss_pred             hcCCCeeEEEEccc
Q 021391          104 SQGRPLNILINNAG  117 (313)
Q Consensus       104 ~~~g~id~lv~~ag  117 (313)
                      ...+++|++|.+.|
T Consensus       234 ~~~~~~d~vid~~g  247 (355)
T cd08230         234 KLVGEFDLIIEATG  247 (355)
T ss_pred             hhcCCCCEEEECcC
Confidence            12347999999997

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=96.07  E-value=0.12  Score=47.42  Aligned_cols=75  Identities=19%  Similarity=0.361  Sum_probs=48.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .|.+++|+|+++++|.++++.....|++|+.+.++ ++ .+..+++     +..   ...|..+.+..+.+    .. .+
T Consensus       162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~-~~~~~~~-----g~~---~~~~~~~~~~~~~l----~~-~~  226 (350)
T cd08248         162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DA-IPLVKSL-----GAD---DVIDYNNEDFEEEL----TE-RG  226 (350)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-ch-HHHHHHh-----CCc---eEEECCChhHHHHH----Hh-cC
Confidence            48999999999999999999999999998888764 22 2222222     221   12233333322222    22 24


Q ss_pred             CeeEEEEccc
Q 021391          108 PLNILINNAG  117 (313)
Q Consensus       108 ~id~lv~~ag  117 (313)
                      ++|+++++.|
T Consensus       227 ~vd~vi~~~g  236 (350)
T cd08248         227 KFDVILDTVG  236 (350)
T ss_pred             CCCEEEECCC
Confidence            7999999887

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.06  E-value=0.031  Score=48.53  Aligned_cols=38  Identities=21%  Similarity=0.393  Sum_probs=34.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCE---EEEEecC
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVH---VIMAVRN   62 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~---V~l~~r~   62 (313)
                      ..++++++++|.|| |+.|++++..|++.|.+   |.+++|+
T Consensus        20 g~~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          20 GKKIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CCCccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            35689999999999 89999999999999984   9999998

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=96.06  E-value=0.13  Score=46.92  Aligned_cols=115  Identities=17%  Similarity=0.239  Sum_probs=70.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC--CEEEEEecCchhHHHHHHHHHHhCC-CCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           31 TAIVTGASSGIGTETARVLALRG--VHVIMAVRNMAAGKDVREAIVKEIP-SAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G--~~V~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      ++.|.|+ |.+|..++..|+.+|  ..|++++++.+..+.....+....+ ........   .+.+       .    ..
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d~~-------~----l~   66 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GDYA-------D----CK   66 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CCHH-------H----hC
Confidence            5889998 899999999999999  5899999998776654444543211 01111111   1211       1    23


Q ss_pred             CeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391          108 PLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus       108 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                      ..|++|.++|....+.    ......+..|+    .+.+.+.+.+.+.    ..+|.+++++...
T Consensus        67 ~aDiViita~~~~~~~----~~r~dl~~~n~----~i~~~~~~~l~~~----~~~giiiv~tNP~  119 (308)
T cd05292          67 GADVVVITAGANQKPG----ETRLDLLKRNV----AIFKEIIPQILKY----APDAILLVVTNPV  119 (308)
T ss_pred             CCCEEEEccCCCCCCC----CCHHHHHHHHH----HHHHHHHHHHHHH----CCCeEEEEecCcH
Confidence            7899999999753321    12233333443    4455555555554    4467888887644

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=96.04  E-value=0.11  Score=48.51  Aligned_cols=78  Identities=18%  Similarity=0.230  Sum_probs=50.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      .|.++||.|+ +++|..++..+...|+ +|++++++.++.+.+ +++     +..   ...|..+.+-.+.+ .+..  .
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~-----Ga~---~~i~~~~~~~~~~i-~~~~--~  257 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-REL-----GAT---ATVNAGDPNAVEQV-RELT--G  257 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHc-----CCc---eEeCCCchhHHHHH-HHHh--C
Confidence            5799999985 8999999888888899 699998887765543 222     221   12333333322222 2221  2


Q ss_pred             CCeeEEEEcccC
Q 021391          107 RPLNILINNAGI  118 (313)
Q Consensus       107 g~id~lv~~ag~  118 (313)
                      +++|++|.+.|.
T Consensus       258 ~g~d~vid~~G~  269 (371)
T cd08281         258 GGVDYAFEMAGS  269 (371)
T ss_pred             CCCCEEEECCCC
Confidence            369999999873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.04  E-value=0.046  Score=52.41  Aligned_cols=79  Identities=18%  Similarity=0.143  Sum_probs=52.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      |++.+|+++|+|.+ ++|.++|+.|+++|++|.+.+.+....  ..+++...  ...+.+......+ .    ..     
T Consensus         1 ~~~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~--~~~~l~~~--~~gi~~~~g~~~~-~----~~-----   65 (445)
T PRK04308          1 MTFQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPE--RVAQIGKM--FDGLVFYTGRLKD-A----LD-----   65 (445)
T ss_pred             CCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCch--hHHHHhhc--cCCcEEEeCCCCH-H----HH-----
Confidence            45789999999986 999999999999999999998765431  12223221  1133333322221 1    11     


Q ss_pred             cCCCeeEEEEcccCCC
Q 021391          105 QGRPLNILINNAGIMA  120 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~  120 (313)
                        ...|.||..+|+.+
T Consensus        66 --~~~d~vv~spgi~~   79 (445)
T PRK04308         66 --NGFDILALSPGISE   79 (445)
T ss_pred             --hCCCEEEECCCCCC
Confidence              25799999999864

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.03  E-value=0.056  Score=50.97  Aligned_cols=64  Identities=25%  Similarity=0.353  Sum_probs=46.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCc-------------------hhHHHHHHHHHHhCCCCceEEEE
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNM-------------------AAGKDVREAIVKEIPSAKVDAME   86 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~   86 (313)
                      ++..+|+|.|+ ||+|..+++.|+..|. ++.++|.+.                   .+.+.+.+.+.+.+|..++..+.
T Consensus        40 L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~  118 (392)
T PRK07878         40 LKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHE  118 (392)
T ss_pred             HhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEe
Confidence            57788999986 5999999999999998 788887652                   24445555566666666666655


Q ss_pred             ccCCC
Q 021391           87 LDVSS   91 (313)
Q Consensus        87 ~D~s~   91 (313)
                      ..++.
T Consensus       119 ~~i~~  123 (392)
T PRK07878        119 FRLDP  123 (392)
T ss_pred             ccCCh
Confidence            55543

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.01  E-value=0.021  Score=51.20  Aligned_cols=41  Identities=24%  Similarity=0.332  Sum_probs=37.3

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM   63 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~   63 (313)
                      ...+++||+++|.|.|.-+|+.++..|.++|++|+++.+..
T Consensus       152 ~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t  192 (286)
T PRK14175        152 ADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS  192 (286)
T ss_pred             cCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence            45689999999999999999999999999999999998653

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=96.01  E-value=0.1  Score=46.60  Aligned_cols=40  Identities=25%  Similarity=0.253  Sum_probs=32.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCE-EEEEecCchhHH
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVH-VIMAVRNMAAGK   67 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~-V~l~~r~~~~~~   67 (313)
                      ..|++++|.|+ +++|..+++.+...|++ |++++++.++.+
T Consensus       119 ~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~  159 (280)
T TIGR03366       119 LKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRE  159 (280)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence            37899999987 79999999888888996 888877765544

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=96.01  E-value=0.07  Score=49.98  Aligned_cols=118  Identities=14%  Similarity=0.081  Sum_probs=74.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-E------EEEE--ecCchhHHHHHHHHHHhC-CCC-ceEEEEccCCCHHHHHHH
Q 021391           30 LTAIVTGASSGIGTETARVLALRGV-H------VIMA--VRNMAAGKDVREAIVKEI-PSA-KVDAMELDVSSLASVRKF   98 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~-~------V~l~--~r~~~~~~~~~~~l~~~~-~~~-~~~~~~~D~s~~~~v~~~   98 (313)
                      -+|.|+||+|.+|.++|..|+..|. .      ++|+  +++.+.++...-++.... +-. ++.. ..  .+.+     
T Consensus        45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i-~~--~~y~-----  116 (387)
T TIGR01757        45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSI-GI--DPYE-----  116 (387)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEE-ec--CCHH-----
Confidence            5789999999999999999998875 3      3344  888888888777776542 211 1111 11  1111     


Q ss_pred             HHHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391           99 ASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus        99 ~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                            .+...|++|.+||....+.    +.-.+.+..|+.    +.+.+.+.+.+.+   ++++.||++|-..
T Consensus       117 ------~~kdaDIVVitAG~prkpg----~tR~dll~~N~~----I~k~i~~~I~~~a---~~~~iviVVsNPv  173 (387)
T TIGR01757       117 ------VFEDADWALLIGAKPRGPG----MERADLLDINGQ----IFADQGKALNAVA---SKNCKVLVVGNPC  173 (387)
T ss_pred             ------HhCCCCEEEECCCCCCCCC----CCHHHHHHHHHH----HHHHHHHHHHHhC---CCCeEEEEcCCcH
Confidence                  1246899999999754332    223344555554    4555555555532   3467888888654

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.00  E-value=0.052  Score=42.39  Aligned_cols=76  Identities=16%  Similarity=0.205  Sum_probs=54.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHH-cCCEEEE-EecCc----------------------hhHHHHHHHHHHhCCCCceEEEE
Q 021391           31 TAIVTGASSGIGTETARVLAL-RGVHVIM-AVRNM----------------------AAGKDVREAIVKEIPSAKVDAME   86 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~-~G~~V~l-~~r~~----------------------~~~~~~~~~l~~~~~~~~~~~~~   86 (313)
                      +++|.|++|-+|+.+++.+.+ .|..++. ++|+.                      ..+++..    ..      .-+.
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~----~~------~DVv   71 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELL----EE------ADVV   71 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHT----TH-------SEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhc----cc------CCEE
Confidence            689999999999999999999 6777554 45655                      1222222    11      1278


Q ss_pred             ccCCCHHHHHHHHHHHhhcCCCeeEEEEcccC
Q 021391           87 LDVSSLASVRKFASEYNSQGRPLNILINNAGI  118 (313)
Q Consensus        87 ~D~s~~~~v~~~~~~~~~~~g~id~lv~~ag~  118 (313)
                      .|+|.++.+...++.+.+.  ++.+++-+.|.
T Consensus        72 IDfT~p~~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   72 IDFTNPDAVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             EEES-HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             EEcCChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence            8999999999999988776  78899988885

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3

Probab=95.99  E-value=0.056  Score=48.68  Aligned_cols=76  Identities=21%  Similarity=0.347  Sum_probs=52.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCc-------------------hhHHHHHHHHHHhCCCCceEEEEccCC
Q 021391           31 TAIVTGASSGIGTETARVLALRGV-HVIMAVRNM-------------------AAGKDVREAIVKEIPSAKVDAMELDVS   90 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~D~s   90 (313)
                      +|||.| .||+|..+++.|+..|. ++.++|.+.                   .+++.+.+.+.+.+|..++..+..++.
T Consensus         1 kVlVVG-aGGlG~eilknLal~Gvg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np~v~I~~~~~~i~   79 (291)
T cd01488           1 KILVIG-AGGLGCELLKNLALSGFRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVPGVNVTPHFGKIQ   79 (291)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCCCCEEEEEecccC
Confidence            367777 57999999999999998 788887642                   244555555666667667777777776


Q ss_pred             CHHHHHHHHHHHhhcCCCeeEEEEcc
Q 021391           91 SLASVRKFASEYNSQGRPLNILINNA  116 (313)
Q Consensus        91 ~~~~v~~~~~~~~~~~g~id~lv~~a  116 (313)
                      +.+  ..++       ...|++|.+.
T Consensus        80 ~~~--~~f~-------~~fdvVi~al   96 (291)
T cd01488          80 DKD--EEFY-------RQFNIIICGL   96 (291)
T ss_pred             chh--HHHh-------cCCCEEEECC
Confidence            532  2222       2567777765

UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=95.98  E-value=0.067  Score=47.73  Aligned_cols=105  Identities=16%  Similarity=0.168  Sum_probs=72.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHH-cCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           28 TGLTAIVTGASSGIGTETARVLAL-RGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~-~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      +|+|++|+||+|..|.- |=+||+ .|++|+..+=+.++..-+..++     +-   -..+|--++..+.+++++...+ 
T Consensus       153 ~geTv~VSaAsGAvGql-~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~-----G~---d~afNYK~e~~~~~aL~r~~P~-  222 (343)
T KOG1196|consen  153 KGETVFVSAASGAVGQL-VGQFAKLMGCYVVGSAGSKEKVDLLKTKF-----GF---DDAFNYKEESDLSAALKRCFPE-  222 (343)
T ss_pred             CCCEEEEeeccchhHHH-HHHHHHhcCCEEEEecCChhhhhhhHhcc-----CC---ccceeccCccCHHHHHHHhCCC-
Confidence            67999999999999964 555665 6999999888877766554432     11   1133444554566666654322 


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccc
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHR  174 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~  174 (313)
                       +||+.+-|.|.-                        ++.+.+..|+.       .|||+..+-++.+
T Consensus       223 -GIDiYfeNVGG~------------------------~lDavl~nM~~-------~gri~~CG~ISqY  258 (343)
T KOG1196|consen  223 -GIDIYFENVGGK------------------------MLDAVLLNMNL-------HGRIAVCGMISQY  258 (343)
T ss_pred             -cceEEEeccCcH------------------------HHHHHHHhhhh-------ccceEeeeeehhc
Confidence             799999999852                        55666667766       6899998866543

>PRK14852 hypothetical protein; Provisional

Probab=95.96  E-value=0.052  Score=56.18  Aligned_cols=83  Identities=14%  Similarity=0.205  Sum_probs=60.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecC-------------------chhHHHHHHHHHHhCCCCceEEE
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRN-------------------MAAGKDVREAIVKEIPSAKVDAM   85 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~   85 (313)
                      .+++.+|+|.| .||+|..++..|+..|. ++.+++.+                   ..+.+.+.+.+.+.+|..+++.+
T Consensus       329 kL~~srVlVvG-lGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~  407 (989)
T PRK14852        329 RLLRSRVAIAG-LGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSF  407 (989)
T ss_pred             HHhcCcEEEEC-CcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEE
Confidence            35778999998 56999999999999998 78887764                   23555666667777777777777


Q ss_pred             EccCCCHHHHHHHHHHHhhcCCCeeEEEEccc
Q 021391           86 ELDVSSLASVRKFASEYNSQGRPLNILINNAG  117 (313)
Q Consensus        86 ~~D~s~~~~v~~~~~~~~~~~g~id~lv~~ag  117 (313)
                      ...++. +.++++++       ++|+||.+.-
T Consensus       408 ~~~I~~-en~~~fl~-------~~DiVVDa~D  431 (989)
T PRK14852        408 PEGVAA-ETIDAFLK-------DVDLLVDGID  431 (989)
T ss_pred             ecCCCH-HHHHHHhh-------CCCEEEECCC
Confidence            766644 44555554       5678776653

>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p

Probab=95.96  E-value=0.033  Score=54.98  Aligned_cols=62  Identities=24%  Similarity=0.374  Sum_probs=46.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecC----------------------chhHHHHHHHHHHhCCCCceE
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRN----------------------MAAGKDVREAIVKEIPSAKVD   83 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~----------------------~~~~~~~~~~l~~~~~~~~~~   83 (313)
                      +++.+|||.|+ ||+|..+++.|+..|. ++++++.+                      ..+++.+.+.+.+.+|..+++
T Consensus       336 L~~~kVLIvGa-GGLGs~VA~~La~~GVg~ItlVD~D~Ve~SNL~RQ~Lf~~~Dv~~~Gk~KA~aAa~~Lk~InP~v~i~  414 (664)
T TIGR01381       336 YSQLKVLLLGA-GTLGCNVARCLIGWGVRHITFVDNGKVSYSNPVRQSLSNFEDCLLGGRGKAETAQKALKRIFPSIQAT  414 (664)
T ss_pred             HhcCeEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEECCCccccccccchhhhhhcCCcHHHHHHHHHHHHCCCcEEE
Confidence            56789999987 6899999999999998 78888753                      124445566667777777776


Q ss_pred             EEEccC
Q 021391           84 AMELDV   89 (313)
Q Consensus        84 ~~~~D~   89 (313)
                      .+...+
T Consensus       415 ~~~~~I  420 (664)
T TIGR01381       415 GHRLTV  420 (664)
T ss_pred             Eeeeee
Confidence            666553

This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.96  E-value=0.016  Score=47.43  Aligned_cols=46  Identities=26%  Similarity=0.343  Sum_probs=35.7

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKD   68 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~   68 (313)
                      ...+++||+++|.|.|.-+|+-++..|.++|++|.++....+.+++
T Consensus        30 ~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~   75 (160)
T PF02882_consen   30 YGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQE   75 (160)
T ss_dssp             TT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHH
T ss_pred             cCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccc
Confidence            4677999999999999999999999999999999998776544443

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=95.96  E-value=0.048  Score=49.33  Aligned_cols=79  Identities=20%  Similarity=0.281  Sum_probs=53.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .+.+++|+|+++++|.+++..+...|++|+.++++.+..+.+ +++     +.. .  ..|..+.+..+.+.+..  ...
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~-----g~~-~--~~~~~~~~~~~~~~~~~--~~~  210 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RAL-----GAD-V--AVDYTRPDWPDQVREAL--GGG  210 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc-----CCC-E--EEecCCccHHHHHHHHc--CCC
Confidence            578999999999999999999999999999999887765543 222     221 1  22333333333322211  112


Q ss_pred             CeeEEEEccc
Q 021391          108 PLNILINNAG  117 (313)
Q Consensus       108 ~id~lv~~ag  117 (313)
                      ++|+++++.|
T Consensus       211 ~~d~vl~~~g  220 (324)
T cd08244         211 GVTVVLDGVG  220 (324)
T ss_pred             CceEEEECCC
Confidence            5999999986

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PRK06223 malate dehydrogenase; Reviewed

Probab=95.94  E-value=0.25  Score=44.83  Aligned_cols=118  Identities=14%  Similarity=0.212  Sum_probs=68.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCC-C-CceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           30 LTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIP-S-AKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~-~-~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      +++.|.|| |.+|..++..++..|. .|++.+++++.++.....+..... . .... +.. -+|.   +. +       
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~-i~~-~~d~---~~-~-------   68 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTK-ITG-TNDY---ED-I-------   68 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcE-EEe-CCCH---HH-H-------
Confidence            57899999 8899999999999875 899999988776554433332211 0 0111 111 1121   11 1       


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                      ...|++|.++|....+. .   .-...+.-|.    -+.+.+.+.+.+.    ..++.+|++|-...
T Consensus        69 ~~aDiVii~~~~p~~~~-~---~r~~~~~~n~----~i~~~i~~~i~~~----~~~~~viv~tNP~d  123 (307)
T PRK06223         69 AGSDVVVITAGVPRKPG-M---SRDDLLGINA----KIMKDVAEGIKKY----APDAIVIVVTNPVD  123 (307)
T ss_pred             CCCCEEEECCCCCCCcC-C---CHHHHHHHHH----HHHHHHHHHHHHH----CCCeEEEEecCcHH
Confidence            26799999998754321 1   1223333343    4555555555553    23566777776543

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.93  E-value=0.03  Score=50.49  Aligned_cols=47  Identities=26%  Similarity=0.224  Sum_probs=40.9

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDV   69 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~   69 (313)
                      ...++.||.++|.|.++-+|+.++..|.++|++|.++.+.....++.
T Consensus       153 ~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~  199 (301)
T PRK14194        153 TCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKAL  199 (301)
T ss_pred             hCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHH
Confidence            46789999999999999999999999999999999998776544443

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=95.92  E-value=0.071  Score=49.41  Aligned_cols=79  Identities=19%  Similarity=0.249  Sum_probs=50.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCE-EEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVH-VIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~-V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      .|.++||.|+ +++|..++..+...|++ |+.++++.++.+.+ +++     +.. .  ..|..+.+..+.+ .+.. ..
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~-~~~-----Ga~-~--~i~~~~~~~~~~i-~~~~-~~  243 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA-REF-----GAT-H--TVNSSGTDPVEAI-RALT-GG  243 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc-----CCc-e--EEcCCCcCHHHHH-HHHh-CC
Confidence            5899999985 99999999888888995 98888887665544 222     221 1  2233333322222 2211 11


Q ss_pred             CCeeEEEEcccC
Q 021391          107 RPLNILINNAGI  118 (313)
Q Consensus       107 g~id~lv~~ag~  118 (313)
                      .++|+++.+.|.
T Consensus       244 ~g~d~vid~~g~  255 (358)
T TIGR03451       244 FGADVVIDAVGR  255 (358)
T ss_pred             CCCCEEEECCCC
Confidence            258999999873

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=95.92  E-value=0.045  Score=51.43  Aligned_cols=77  Identities=17%  Similarity=0.280  Sum_probs=56.5

Q ss_pred             cCCC-CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHH
Q 021391           23 QGID-GTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFAS  100 (313)
Q Consensus        23 ~~~~-~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~  100 (313)
                      ..+. ++++++||.||+ -+|.-+|++|+++|. +|+++.|+.++++++.+++.            .+....+++.....
T Consensus       171 ~~~~~L~~~~vlvIGAG-em~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~------------~~~~~l~el~~~l~  237 (414)
T COG0373         171 RIFGSLKDKKVLVIGAG-EMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG------------AEAVALEELLEALA  237 (414)
T ss_pred             HHhcccccCeEEEEccc-HHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC------------CeeecHHHHHHhhh
Confidence            4454 899999999984 689999999999996 79999999999888887662            11222233333333


Q ss_pred             HHhhcCCCeeEEEEcccCC
Q 021391          101 EYNSQGRPLNILINNAGIM  119 (313)
Q Consensus       101 ~~~~~~g~id~lv~~ag~~  119 (313)
                             ..|++|.+.|..
T Consensus       238 -------~~DvVissTsa~  249 (414)
T COG0373         238 -------EADVVISSTSAP  249 (414)
T ss_pred             -------hCCEEEEecCCC
Confidence                   578888887754

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=95.90  E-value=0.14  Score=47.40  Aligned_cols=39  Identities=23%  Similarity=0.279  Sum_probs=33.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHH
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGK   67 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~   67 (313)
                      .|.++||+| ++++|.+++..+...|+ +|++++++.++.+
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~  216 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLE  216 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence            789999997 59999999998888999 8999988766544

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=95.88  E-value=0.043  Score=39.80  Aligned_cols=37  Identities=32%  Similarity=0.457  Sum_probs=32.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHc-CCEEEEEec
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALR-GVHVIMAVR   61 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~-G~~V~l~~r   61 (313)
                      +.++.+|+++|.|+ |++|+.++..|.+. +.+|.+++|
T Consensus        18 ~~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          18 NKSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            35689999999999 99999999999999 557888876

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=95.85  E-value=0.032  Score=50.51  Aligned_cols=79  Identities=23%  Similarity=0.344  Sum_probs=52.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      +|.+++|.|+++++|.++++.....|++|+++.++.++.+.+.+ +     +.. .++  +-.+.+ ....+.+... ..
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~-----g~~-~~~--~~~~~~-~~~~i~~~~~-~~  207 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-L-----GIG-PVV--STEQPG-WQDKVREAAG-GA  207 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-c-----CCC-EEE--cCCCch-HHHHHHHHhC-CC
Confidence            68999999999999999999999999999999888766544432 1     221 122  222222 2222222211 12


Q ss_pred             CeeEEEEccc
Q 021391          108 PLNILINNAG  117 (313)
Q Consensus       108 ~id~lv~~ag  117 (313)
                      ++|+++.+.|
T Consensus       208 ~~d~v~d~~g  217 (324)
T cd08292         208 PISVALDSVG  217 (324)
T ss_pred             CCcEEEECCC
Confidence            6999999887

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PLN02928 oxidoreductase family protein

Probab=95.84  E-value=0.043  Score=50.82  Aligned_cols=38  Identities=29%  Similarity=0.316  Sum_probs=34.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM   63 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~   63 (313)
                      .++.||++.|.|- |.||+++|+.|...|++|+..+|+.
T Consensus       155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~  192 (347)
T PLN02928        155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSW  192 (347)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCC
Confidence            4689999999997 8999999999999999999998874

>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively

Probab=95.82  E-value=0.072  Score=47.98  Aligned_cols=31  Identities=29%  Similarity=0.444  Sum_probs=25.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-EEEEEecC
Q 021391           31 TAIVTGASSGIGTETARVLALRGV-HVIMAVRN   62 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G~-~V~l~~r~   62 (313)
                      +|+|.|+ ||+|..+|+.|+..|. ++++++.+
T Consensus         1 kVLIvGa-GGLGs~vA~~La~aGVg~ItlvD~D   32 (307)
T cd01486           1 KCLLLGA-GTLGCNVARNLLGWGVRHITFVDSG   32 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEECCC
Confidence            3677765 5999999999999998 78887754

This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.81  E-value=0.091  Score=50.27  Aligned_cols=41  Identities=32%  Similarity=0.525  Sum_probs=35.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHH
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVR   70 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~   70 (313)
                      +++.|.||+|++|.++++.|.+.|++|++++|+.+...+..
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a   41 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVA   41 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHH
Confidence            36899999999999999999999999999999876654433

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=95.80  E-value=0.032  Score=52.29  Aligned_cols=39  Identities=28%  Similarity=0.335  Sum_probs=33.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHc-CCEEEEEecCchhH
Q 021391           28 TGLTAIVTGASSGIGTETARVLALR-GVHVIMAVRNMAAG   66 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~-G~~V~l~~r~~~~~   66 (313)
                      ..+++.|.||||.+|..+.+.|+++ +++|.++.++....
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG   76 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAG   76 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcC
Confidence            5578999999999999999999998 67888888765443

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=95.80  E-value=0.068  Score=48.04  Aligned_cols=77  Identities=14%  Similarity=0.232  Sum_probs=51.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      -+|.+++|.|+++++|.++++.....|++|+.+.++.++.+.+ .++     +... ++ .+  .. +....+.+.   .
T Consensus       141 ~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~~-~~-~~--~~-~~~~~i~~~---~  206 (320)
T cd08243         141 QPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-KEL-----GADE-VV-ID--DG-AIAEQLRAA---P  206 (320)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hhc-----CCcE-EE-ec--Cc-cHHHHHHHh---C
Confidence            4689999999999999999999999999999998887654433 222     2221 11 12  21 222222222   2


Q ss_pred             CCeeEEEEccc
Q 021391          107 RPLNILINNAG  117 (313)
Q Consensus       107 g~id~lv~~ag  117 (313)
                      .++|.++++.|
T Consensus       207 ~~~d~vl~~~~  217 (320)
T cd08243         207 GGFDKVLELVG  217 (320)
T ss_pred             CCceEEEECCC
Confidence            36999999886

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.79  E-value=0.043  Score=49.92  Aligned_cols=79  Identities=16%  Similarity=0.304  Sum_probs=52.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      .+|.+++|.|+++++|.+++......|++|+.+.++.++.+.+ +++     +.. ..  .|..+. +....+.+..  .
T Consensus       138 ~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~-~v--~~~~~~-~~~~~~~~~~--~  205 (329)
T cd08250         138 KSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSL-----GCD-RP--INYKTE-DLGEVLKKEY--P  205 (329)
T ss_pred             CCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHc-----CCc-eE--EeCCCc-cHHHHHHHhc--C
Confidence            4689999999999999999998889999999999887655443 222     221 12  222222 2222333322  2


Q ss_pred             CCeeEEEEccc
Q 021391          107 RPLNILINNAG  117 (313)
Q Consensus       107 g~id~lv~~ag  117 (313)
                      +++|+++++.|
T Consensus       206 ~~vd~v~~~~g  216 (329)
T cd08250         206 KGVDVVYESVG  216 (329)
T ss_pred             CCCeEEEECCc
Confidence            36999999876

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.78  E-value=0.08  Score=51.25  Aligned_cols=81  Identities=14%  Similarity=0.089  Sum_probs=53.6

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCch-hHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMA-AGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      ...++++++++|.|+ |++|.++|+.|+++|++|.+++++.. ......+.+.+.    .+.+...+-..          
T Consensus        10 ~~~~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~----gv~~~~~~~~~----------   74 (480)
T PRK01438         10 WHSDWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEAL----GATVRLGPGPT----------   74 (480)
T ss_pred             cccCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHc----CCEEEECCCcc----------
Confidence            444578999999997 67999999999999999999986543 333333444432    23333322111          


Q ss_pred             HhhcCCCeeEEEEcccCCCC
Q 021391          102 YNSQGRPLNILINNAGIMAS  121 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~~~  121 (313)
                         .....|.+|..+|+.+.
T Consensus        75 ---~~~~~D~Vv~s~Gi~~~   91 (480)
T PRK01438         75 ---LPEDTDLVVTSPGWRPD   91 (480)
T ss_pred             ---ccCCCCEEEECCCcCCC
Confidence               01257999999997543

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.78  E-value=0.059  Score=45.92  Aligned_cols=38  Identities=18%  Similarity=0.350  Sum_probs=34.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM   63 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~   63 (313)
                      ++++||.+||.|| |.+|...++.|.+.|++|+++.++.
T Consensus         6 l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          6 IDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            5689999999998 8899999999999999999998754

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=95.78  E-value=0.072  Score=49.66  Aligned_cols=79  Identities=16%  Similarity=0.131  Sum_probs=52.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCC-HHHHHHHHHHHhhc
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSS-LASVRKFASEYNSQ  105 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~-~~~v~~~~~~~~~~  105 (313)
                      .|.++||+|+ +++|..++..+...|+ +|+.++++.++.+.+ +++     +...   ..|..+ .+.+...+.++.. 
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~-----Ga~~---~i~~~~~~~~~~~~v~~~~~-  253 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKL-----GATD---CVNPNDYDKPIQEVIVEITD-  253 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh-----CCCe---EEcccccchhHHHHHHHHhC-
Confidence            5899999986 8999999988888899 799999887765544 333     2221   223332 2223333333322 


Q ss_pred             CCCeeEEEEcccC
Q 021391          106 GRPLNILINNAGI  118 (313)
Q Consensus       106 ~g~id~lv~~ag~  118 (313)
                       +++|++|.++|.
T Consensus       254 -~g~d~vid~~G~  265 (368)
T TIGR02818       254 -GGVDYSFECIGN  265 (368)
T ss_pred             -CCCCEEEECCCC
Confidence             369999999983

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.78  E-value=0.052  Score=51.98  Aligned_cols=78  Identities=14%  Similarity=0.143  Sum_probs=58.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      ...+.++|.|+ |.+|+.+++.|.+.|..|++++++++..+...+.      ...+.++..|.++.+..+++-      .
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~------~~~~~~i~gd~~~~~~L~~~~------~  295 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEE------LPNTLVLHGDGTDQELLEEEG------I  295 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH------CCCCeEEECCCCCHHHHHhcC------C
Confidence            45788999999 9999999999999999999999998766654432      224667899999987654331      2


Q ss_pred             CCeeEEEEccc
Q 021391          107 RPLNILINNAG  117 (313)
Q Consensus       107 g~id~lv~~ag  117 (313)
                      ...|.+|.+.+
T Consensus       296 ~~a~~vi~~~~  306 (453)
T PRK09496        296 DEADAFIALTN  306 (453)
T ss_pred             ccCCEEEECCC
Confidence            35677776553

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=95.77  E-value=0.14  Score=46.17  Aligned_cols=41  Identities=24%  Similarity=0.353  Sum_probs=35.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHH
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDV   69 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~   69 (313)
                      +.+++|.|+++++|.+++......|++|++++++.++.+.+
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  187 (325)
T cd05280         147 DGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYL  187 (325)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            46999999999999999988888999999999887665543

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>TIGR00936 ahcY adenosylhomocysteinase

Probab=95.76  E-value=0.08  Score=49.93  Aligned_cols=42  Identities=21%  Similarity=0.139  Sum_probs=36.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhH
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAG   66 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~   66 (313)
                      +..+.||+++|.|. |.||+.+++.+...|++|+++++++...
T Consensus       190 ~~~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~  231 (406)
T TIGR00936       190 NLLIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRA  231 (406)
T ss_pred             CCCCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhH
Confidence            45689999999995 5699999999999999999999887654

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=95.70  E-value=0.28  Score=44.60  Aligned_cols=121  Identities=17%  Similarity=0.097  Sum_probs=69.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           30 LTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      +++.|.|+ |.+|..+|..|+..|. +|++++.+.+..+.....+....+....   ...++-..+.+.        ...
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~---~~~i~~t~d~~~--------~~~   69 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGF---DTKVTGTNNYAD--------TAN   69 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCC---CcEEEecCCHHH--------hCC
Confidence            46788997 8899999999999886 8999999766444222223221110000   001110011111        136


Q ss_pred             eeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccc
Q 021391          109 LNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHR  174 (313)
Q Consensus       109 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~  174 (313)
                      .|++|.++|....+.    +.-.+.+..|+.-...+.+.+.++.        .++.||++|.....
T Consensus        70 aDiVIitag~p~~~~----~sR~~l~~~N~~iv~~i~~~I~~~~--------p~~~iIv~tNP~di  123 (305)
T TIGR01763        70 SDIVVITAGLPRKPG----MSREDLLSMNAGIVREVTGRIMEHS--------PNPIIVVVSNPLDA  123 (305)
T ss_pred             CCEEEEcCCCCCCcC----CCHHHHHHHHHHHHHHHHHHHHHHC--------CCeEEEEecCcHHH
Confidence            799999999754321    1222355566655555555555442        35788888876643

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.69  E-value=0.044  Score=49.43  Aligned_cols=90  Identities=22%  Similarity=0.171  Sum_probs=59.1

Q ss_pred             CCCCccchhc-----cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEe-cCchhHHHHHHHHHHhCCCCceEEEE
Q 021391           13 SASSTAEEVT-----QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAV-RNMAAGKDVREAIVKEIPSAKVDAME   86 (313)
Q Consensus        13 ~~~~~~~~~~-----~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~-r~~~~~~~~~~~l~~~~~~~~~~~~~   86 (313)
                      ..|||..-..     ...+++||+++|.|-++-+|+.+|..|+++|+.|.++. |+. .+++..    +     ....+.
T Consensus       137 ~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~-~l~e~~----~-----~ADIVI  206 (296)
T PRK14188        137 LVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR-DLPAVC----R-----RADILV  206 (296)
T ss_pred             CcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC-CHHHHH----h-----cCCEEE
Confidence            4566653222     35689999999999999999999999999999999995 554 232222    1     233455


Q ss_pred             ccCCCHHHHHHHHHHHhhcCCCeeEEEEcccCC
Q 021391           87 LDVSSLASVRKFASEYNSQGRPLNILINNAGIM  119 (313)
Q Consensus        87 ~D~s~~~~v~~~~~~~~~~~g~id~lv~~ag~~  119 (313)
                      +-+.++..++...       -+...+|-..|+.
T Consensus       207 savg~~~~v~~~~-------lk~GavVIDvGin  232 (296)
T PRK14188        207 AAVGRPEMVKGDW-------IKPGATVIDVGIN  232 (296)
T ss_pred             EecCChhhcchhe-------ecCCCEEEEcCCc
Confidence            5555555544432       1334556666654

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.66  E-value=0.034  Score=46.47  Aligned_cols=44  Identities=27%  Similarity=0.319  Sum_probs=36.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHH
Q 021391           31 TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVK   75 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~   75 (313)
                      +|.|.|| |-+|+.+|..++..|++|++.+++.+.++...+.+..
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~   44 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIER   44 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHH
Confidence            4678888 9999999999999999999999999888877776654

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=95.63  E-value=0.045  Score=48.92  Aligned_cols=43  Identities=23%  Similarity=0.237  Sum_probs=37.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHH
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDV   69 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~   69 (313)
                      .+|.+++|.|+++++|.++++.+...|++|+.++++.++.+.+
T Consensus       135 ~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  177 (320)
T cd05286         135 KPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA  177 (320)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            3689999999999999999999999999999998877665443

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=95.62  E-value=0.05  Score=48.75  Aligned_cols=42  Identities=26%  Similarity=0.326  Sum_probs=36.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHH
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKD   68 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~   68 (313)
                      .+|.+++|+|+++++|.+++..+...|++|+.++++.+..+.
T Consensus       138 ~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~  179 (323)
T cd08241         138 QPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLAL  179 (323)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHH
Confidence            368999999999999999999999999999999988765443

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=95.61  E-value=0.098  Score=48.21  Aligned_cols=79  Identities=27%  Similarity=0.356  Sum_probs=51.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      +|.+++|+|+ +++|..+++.+...|+ +|++++++.++.+.+ .++     +..   ...|..+.+-.+.+.+ .. ..
T Consensus       172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~~-----ga~---~~i~~~~~~~~~~l~~-~~-~~  239 (351)
T cd08233         172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA-EEL-----GAT---IVLDPTEVDVVAEVRK-LT-GG  239 (351)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh-----CCC---EEECCCccCHHHHHHH-Hh-CC
Confidence            6899999985 7999999999999999 788888887765543 222     222   1234344332222222 11 11


Q ss_pred             CCeeEEEEcccC
Q 021391          107 RPLNILINNAGI  118 (313)
Q Consensus       107 g~id~lv~~ag~  118 (313)
                      +++|+++.+.|.
T Consensus       240 ~~~d~vid~~g~  251 (351)
T cd08233         240 GGVDVSFDCAGV  251 (351)
T ss_pred             CCCCEEEECCCC
Confidence            259999999973

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=95.59  E-value=0.08  Score=45.84  Aligned_cols=91  Identities=14%  Similarity=0.119  Sum_probs=60.2

Q ss_pred             CCCCCccchhccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCC
Q 021391           12 FSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSS   91 (313)
Q Consensus        12 ~~~~~~~~~~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~   91 (313)
                      .+.-+.....-..+++.|+++|=.|+++|   .++..||+.|++|...|-.++..+.+...-.+.  +..+.+       
T Consensus        43 ~rl~~i~~~~~~~~~l~g~~vLDvGCGgG---~Lse~mAr~Ga~VtgiD~se~~I~~Ak~ha~e~--gv~i~y-------  110 (243)
T COG2227          43 LRLDYIREVARLRFDLPGLRVLDVGCGGG---ILSEPLARLGASVTGIDASEKPIEVAKLHALES--GVNIDY-------  110 (243)
T ss_pred             chhhhhhhhhhcccCCCCCeEEEecCCcc---HhhHHHHHCCCeeEEecCChHHHHHHHHhhhhc--cccccc-------
Confidence            33334444444555589999999999999   799999999999999998877666543322111  111112       


Q ss_pred             HHHHHHHHHHHhhcCCCeeEEEEccc
Q 021391           92 LASVRKFASEYNSQGRPLNILINNAG  117 (313)
Q Consensus        92 ~~~v~~~~~~~~~~~g~id~lv~~ag  117 (313)
                         ....++++.+..+..|+|++.-=
T Consensus       111 ---~~~~~edl~~~~~~FDvV~cmEV  133 (243)
T COG2227         111 ---RQATVEDLASAGGQFDVVTCMEV  133 (243)
T ss_pred             ---hhhhHHHHHhcCCCccEEEEhhH
Confidence               22334555555578999998763

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=95.58  E-value=0.13  Score=47.36  Aligned_cols=40  Identities=23%  Similarity=0.165  Sum_probs=33.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCE-EEEEecCchhHHH
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVH-VIMAVRNMAAGKD   68 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~-V~l~~r~~~~~~~   68 (313)
                      .|++++|+|+ +++|..+++.+...|++ |+.++++.++.+.
T Consensus       160 ~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~  200 (347)
T PRK10309        160 EGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDINSEKLAL  200 (347)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHH
Confidence            6899999975 99999999888889997 6788887766554

>PLN02740 Alcohol dehydrogenase-like

Probab=95.55  E-value=0.081  Score=49.53  Aligned_cols=80  Identities=15%  Similarity=0.141  Sum_probs=52.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHH-HHHHHHHHHhh
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLA-SVRKFASEYNS  104 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~-~v~~~~~~~~~  104 (313)
                      -.|.++||.|+ |++|..++..+...|+ +|++++++.++.+.+. ++     +... +  .|..+.+ ...+.+.++..
T Consensus       197 ~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~-~~-----Ga~~-~--i~~~~~~~~~~~~v~~~~~  266 (381)
T PLN02740        197 QAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGK-EM-----GITD-F--INPKDSDKPVHERIREMTG  266 (381)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHH-Hc-----CCcE-E--EecccccchHHHHHHHHhC
Confidence            35899999996 8999999998888999 6999998877655442 22     2221 2  2333321 23333333322


Q ss_pred             cCCCeeEEEEcccC
Q 021391          105 QGRPLNILINNAGI  118 (313)
Q Consensus       105 ~~g~id~lv~~ag~  118 (313)
                        +++|+++.+.|.
T Consensus       267 --~g~dvvid~~G~  278 (381)
T PLN02740        267 --GGVDYSFECAGN  278 (381)
T ss_pred             --CCCCEEEECCCC
Confidence              269999999984

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=95.54  E-value=0.082  Score=49.15  Aligned_cols=74  Identities=14%  Similarity=0.199  Sum_probs=48.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .|++++|.|+ |++|..++..+...|++|++++.+.++..+..+++     +...   ..|..+.+.+.+       ..+
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~-----Ga~~---vi~~~~~~~~~~-------~~~  246 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRL-----GADS---FLVSTDPEKMKA-------AIG  246 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhC-----CCcE---EEcCCCHHHHHh-------hcC
Confidence            6899999775 89999999988889999988887765544443332     2221   123333222221       123


Q ss_pred             CeeEEEEccc
Q 021391          108 PLNILINNAG  117 (313)
Q Consensus       108 ~id~lv~~ag  117 (313)
                      ++|++|.+.|
T Consensus       247 ~~D~vid~~g  256 (360)
T PLN02586        247 TMDYIIDTVS  256 (360)
T ss_pred             CCCEEEECCC
Confidence            6899999987

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=95.53  E-value=0.033  Score=49.73  Aligned_cols=43  Identities=26%  Similarity=0.383  Sum_probs=37.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHH
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREA   72 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~   72 (313)
                      +++++|.|| ||-+++++..|++.|+ +|.++.|+.++.+.+.+.
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~  165 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAEL  165 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence            578999996 8999999999999998 699999998877766554

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=95.53  E-value=0.28  Score=43.63  Aligned_cols=37  Identities=27%  Similarity=0.510  Sum_probs=33.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM   63 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~   63 (313)
                      .+|.+++|.|+++++|.+++..+...|++|+.+.++.
T Consensus       143 ~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~  179 (309)
T cd05289         143 KAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAA  179 (309)
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecch
Confidence            4689999999999999999999999999999888765

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=95.51  E-value=0.055  Score=48.91  Aligned_cols=80  Identities=21%  Similarity=0.275  Sum_probs=52.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      .+|.+++|.|+++++|.+++..+...|++|+++.++.++.+.+ +++     +..   ...|..+......+ .+. ...
T Consensus       137 ~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~~~~~~~-~~~-~~~  205 (323)
T cd05282         137 PPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KAL-----GAD---EVIDSSPEDLAQRV-KEA-TGG  205 (323)
T ss_pred             CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-Hhc-----CCC---EEecccchhHHHHH-HHH-hcC
Confidence            4678999999999999999999999999999998887654433 222     221   12222222222222 221 112


Q ss_pred             CCeeEEEEccc
Q 021391          107 RPLNILINNAG  117 (313)
Q Consensus       107 g~id~lv~~ag  117 (313)
                      .++|+++.+.|
T Consensus       206 ~~~d~vl~~~g  216 (323)
T cd05282         206 AGARLALDAVG  216 (323)
T ss_pred             CCceEEEECCC
Confidence            36999999887

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=95.44  E-value=0.11  Score=48.33  Aligned_cols=80  Identities=14%  Similarity=0.101  Sum_probs=53.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCH-HHHHHHHHHHhh
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSL-ASVRKFASEYNS  104 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~-~~v~~~~~~~~~  104 (313)
                      -.|.++||.|+ +++|..++..+...|+ +|+.++++.++.+.+ +++     +...   ..|..+. +++.+.+.++..
T Consensus       185 ~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~l-----Ga~~---~i~~~~~~~~~~~~v~~~~~  254 (368)
T cd08300         185 EPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKF-----GATD---CVNPKDHDKPIQQVLVEMTD  254 (368)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc-----CCCE---EEcccccchHHHHHHHHHhC
Confidence            35899999985 8999999999989999 799999988776543 232     2221   2333332 234444444322


Q ss_pred             cCCCeeEEEEcccC
Q 021391          105 QGRPLNILINNAGI  118 (313)
Q Consensus       105 ~~g~id~lv~~ag~  118 (313)
                        +++|+++.+.|.
T Consensus       255 --~g~d~vid~~g~  266 (368)
T cd08300         255 --GGVDYTFECIGN  266 (368)
T ss_pred             --CCCcEEEECCCC
Confidence              379999999873

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=95.43  E-value=0.14  Score=46.47  Aligned_cols=43  Identities=19%  Similarity=0.308  Sum_probs=36.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHH
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDV   69 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~   69 (313)
                      -.|.+++|.|+++++|.++++.+...|++++++.++.+..+.+
T Consensus       139 ~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  181 (334)
T PTZ00354        139 KKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC  181 (334)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            3678999999999999999999999999988888876655444

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=95.41  E-value=0.15  Score=43.78  Aligned_cols=79  Identities=14%  Similarity=0.100  Sum_probs=54.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHH-----------hCCCCceEEEEccCCCHHHHH
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVK-----------EIPSAKVDAMELDVSSLASVR   96 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~-----------~~~~~~~~~~~~D~s~~~~v~   96 (313)
                      .+.+||+.|++.|   .-+..||++|++|+.++.++..++.+.++-..           .+.+.++.++.+|+.+...  
T Consensus        34 ~~~rvLd~GCG~G---~da~~LA~~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~--  108 (213)
T TIGR03840        34 AGARVFVPLCGKS---LDLAWLAEQGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA--  108 (213)
T ss_pred             CCCeEEEeCCCch---hHHHHHHhCCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc--
Confidence            6789999999987   46778899999999999999888865432110           1123467888888887542  


Q ss_pred             HHHHHHhhcCCCeeEEEEcccC
Q 021391           97 KFASEYNSQGRPLNILINNAGI  118 (313)
Q Consensus        97 ~~~~~~~~~~g~id~lv~~ag~  118 (313)
                             ...+..|.++-.+..
T Consensus       109 -------~~~~~fD~i~D~~~~  123 (213)
T TIGR03840       109 -------ADLGPVDAVYDRAAL  123 (213)
T ss_pred             -------ccCCCcCEEEechhh
Confidence                   012356777665543

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>TIGR00537 hemK_rel_arch HemK-related putative methylase

Probab=95.40  E-value=0.6  Score=38.68  Aligned_cols=76  Identities=18%  Similarity=0.183  Sum_probs=55.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      .+++++|=.|++.|.   ++..+++.|.+|+.++.+++..+.+.+.+...  +.++.++..|+.+..            .
T Consensus        18 ~~~~~vLdlG~G~G~---~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~~d~~~~~------------~   80 (179)
T TIGR00537        18 LKPDDVLEIGAGTGL---VAIRLKGKGKCILTTDINPFAVKELRENAKLN--NVGLDVVMTDLFKGV------------R   80 (179)
T ss_pred             cCCCeEEEeCCChhH---HHHHHHhcCCEEEEEECCHHHHHHHHHHHHHc--CCceEEEEccccccc------------C
Confidence            567889989988874   56667777889999999988777766665543  346778888875521            1


Q ss_pred             CCeeEEEEcccCC
Q 021391          107 RPLNILINNAGIM  119 (313)
Q Consensus       107 g~id~lv~~ag~~  119 (313)
                      +..|.++.|....
T Consensus        81 ~~fD~Vi~n~p~~   93 (179)
T TIGR00537        81 GKFDVILFNPPYL   93 (179)
T ss_pred             CcccEEEECCCCC
Confidence            3689999887654

The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes.

>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A

Probab=95.39  E-value=0.12  Score=39.38  Aligned_cols=114  Identities=15%  Similarity=0.107  Sum_probs=66.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcC-CEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRG-VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      |.++|--|+++|.   +...+++.| .+++.++.++...+-....+.......++.++..|+.+..      +.  ...+
T Consensus         1 g~~vlD~~~G~G~---~~~~~~~~~~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------~~--~~~~   69 (117)
T PF13659_consen    1 GDRVLDPGCGSGT---FLLAALRRGAARVTGVDIDPEAVELARRNLPRNGLDDRVEVIVGDARDLP------EP--LPDG   69 (117)
T ss_dssp             TEEEEEETSTTCH---HHHHHHHHCTCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEEESHHHHHH------HT--CTTT
T ss_pred             CCEEEEcCcchHH---HHHHHHHHCCCeEEEEEECHHHHHHHHHHHHHccCCceEEEEECchhhch------hh--ccCc
Confidence            5677877877775   333444445 7999999999887776666655433457889888875542      11  1235


Q ss_pred             CeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEEC
Q 021391          108 PLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVS  169 (313)
Q Consensus       108 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~is  169 (313)
                      +.|+++.|.-+.....  ......+       ....+++.+.+.+++       +|.+++++
T Consensus        70 ~~D~Iv~npP~~~~~~--~~~~~~~-------~~~~~~~~~~~~L~~-------gG~~~~~~  115 (117)
T PF13659_consen   70 KFDLIVTNPPYGPRSG--DKAALRR-------LYSRFLEAAARLLKP-------GGVLVFIT  115 (117)
T ss_dssp             -EEEEEE--STTSBTT------GGC-------HHHHHHHHHHHHEEE-------EEEEEEEE
T ss_pred             eeEEEEECCCCccccc--cchhhHH-------HHHHHHHHHHHHcCC-------CeEEEEEe
Confidence            8999999997653211  1111111       233456666666654       67777764

...

>COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis]

Probab=95.34  E-value=0.18  Score=42.12  Aligned_cols=81  Identities=25%  Similarity=0.177  Sum_probs=62.1

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      ..-+++||+|+=-||+.|+   ++...+-.|+ +|+.++.+++..+-..+...+  ...++.++.+|+++..        
T Consensus        40 ~~g~l~g~~V~DlG~GTG~---La~ga~~lGa~~V~~vdiD~~a~ei~r~N~~~--l~g~v~f~~~dv~~~~--------  106 (198)
T COG2263          40 LRGDLEGKTVLDLGAGTGI---LAIGAALLGASRVLAVDIDPEALEIARANAEE--LLGDVEFVVADVSDFR--------  106 (198)
T ss_pred             HcCCcCCCEEEEcCCCcCH---HHHHHHhcCCcEEEEEecCHHHHHHHHHHHHh--hCCceEEEEcchhhcC--------
Confidence            6678999999999999886   3334445565 799999999888776666555  2668999999999864        


Q ss_pred             HhhcCCCeeEEEEcccCCCC
Q 021391          102 YNSQGRPLNILINNAGIMAS  121 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~~~  121 (313)
                           ++.|.+|.|.-+...
T Consensus       107 -----~~~dtvimNPPFG~~  121 (198)
T COG2263         107 -----GKFDTVIMNPPFGSQ  121 (198)
T ss_pred             -----CccceEEECCCCccc
Confidence                 478899999865544

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.33  E-value=0.057  Score=48.33  Aligned_cols=49  Identities=22%  Similarity=0.224  Sum_probs=40.2

Q ss_pred             CCCccchhc-----cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecC
Q 021391           14 ASSTAEEVT-----QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRN   62 (313)
Q Consensus        14 ~~~~~~~~~-----~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~   62 (313)
                      .|||..-..     ...+++||.++|.|.|.-+|+-++..|.++|++|.++...
T Consensus       137 ~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~  190 (285)
T PRK14191        137 VPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHIL  190 (285)
T ss_pred             CCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCC
Confidence            466663222     4568999999999999999999999999999999987543

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.33  E-value=0.013  Score=44.16  Aligned_cols=38  Identities=24%  Similarity=0.397  Sum_probs=33.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM   63 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~   63 (313)
                      ++++||++||.|+ |.+|..=++.|++.|++|++++.+.
T Consensus         3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            5789999999999 8999999999999999999999886

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=95.32  E-value=0.11  Score=48.20  Aligned_cols=79  Identities=15%  Similarity=0.212  Sum_probs=52.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCH-HHHHHHHHHHhh
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSL-ASVRKFASEYNS  104 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~-~~v~~~~~~~~~  104 (313)
                      -+|.+++|.|+ +++|..+++.+...|+ +|+.++++.++.+.+ +++     +.. .  ..|..+. +++.+.+.++..
T Consensus       186 ~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~-----Ga~-~--~i~~~~~~~~~~~~v~~~~~  255 (369)
T cd08301         186 KKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKF-----GVT-E--FVNPKDHDKPVQEVIAEMTG  255 (369)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc-----CCc-e--EEcccccchhHHHHHHHHhC
Confidence            36899999985 8999999988888999 799999987765543 222     221 1  2233321 234444444332


Q ss_pred             cCCCeeEEEEccc
Q 021391          105 QGRPLNILINNAG  117 (313)
Q Consensus       105 ~~g~id~lv~~ag  117 (313)
                        +++|+++.+.|
T Consensus       256 --~~~d~vid~~G  266 (369)
T cd08301         256 --GGVDYSFECTG  266 (369)
T ss_pred             --CCCCEEEECCC
Confidence              26999999987

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=95.30  E-value=0.29  Score=46.15  Aligned_cols=117  Identities=16%  Similarity=0.181  Sum_probs=64.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEE-ecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMA-VRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      ..|.+++|. |+++||..++..+...|++++++ +++.++.+.+ +++     +..    .+|.....+....+.++.. 
T Consensus       184 ~~g~~VlV~-G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a-~~~-----Ga~----~v~~~~~~~~~~~v~~~~~-  251 (393)
T TIGR02819       184 GPGSTVYIA-GAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQA-RSF-----GCE----TVDLSKDATLPEQIEQILG-  251 (393)
T ss_pred             CCCCEEEEE-CCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHH-HHc-----CCe----EEecCCcccHHHHHHHHcC-
Confidence            468999995 56899999998888899975554 5554443332 222     332    1333322222222333221 


Q ss_pred             CCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCc
Q 021391          106 GRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSE  171 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~  171 (313)
                      ..++|++|.+.|....+.  ..+...       ...-..++.++..+.+       +|+|++++..
T Consensus       252 ~~g~Dvvid~~G~~~~~~--~~~~~~-------~~~~~~~~~~~~~~~~-------~G~i~~~G~~  301 (393)
T TIGR02819       252 EPEVDCAVDCVGFEARGH--GHDGKK-------EAPATVLNSLMEVTRV-------GGAIGIPGLY  301 (393)
T ss_pred             CCCCcEEEECCCCccccc--cccccc-------cchHHHHHHHHHHhhC-------CCEEEEeeec
Confidence            235899999999642211  011111       0222234444555544       8999998763

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=95.29  E-value=0.081  Score=41.54  Aligned_cols=89  Identities=24%  Similarity=0.276  Sum_probs=54.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEe-cCchhHHHHHHHHHHhC---C---CCceEEEEccCCCHHHHHHHHHH
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAV-RNMAAGKDVREAIVKEI---P---SAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~-r~~~~~~~~~~~l~~~~---~---~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      ..++-|.|+ |-+|.++++.|.+.|+.|..+. |+.+..+++...+....   .   -.....+.+-+.|. .+..+.++
T Consensus        10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDd-aI~~va~~   87 (127)
T PF10727_consen   10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDD-AIAEVAEQ   87 (127)
T ss_dssp             --EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CC-HHHHHHHH
T ss_pred             ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechH-HHHHHHHH
Confidence            357888998 7899999999999999988774 66655555544432110   0   11344555555665 68888998


Q ss_pred             Hhhc--CCCeeEEEEcccCC
Q 021391          102 YNSQ--GRPLNILINNAGIM  119 (313)
Q Consensus       102 ~~~~--~g~id~lv~~ag~~  119 (313)
                      +...  +.+=.++|||.|..
T Consensus        88 La~~~~~~~g~iVvHtSGa~  107 (127)
T PF10727_consen   88 LAQYGAWRPGQIVVHTSGAL  107 (127)
T ss_dssp             HHCC--S-TT-EEEES-SS-
T ss_pred             HHHhccCCCCcEEEECCCCC
Confidence            8776  43446999999965

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=95.27  E-value=0.11  Score=49.18  Aligned_cols=89  Identities=9%  Similarity=0.101  Sum_probs=51.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC---EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGV---HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~---~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      .|.+++|.||+|++|..++..+...|+   +|++++++.++.+.+.+-...............|..+.++..+.+.++- 
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t-  253 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATIDDLHATLMELT-  253 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCccccHHHHHHHHh-
Confidence            578999999999999998876666554   7999999887766543311100000011212234333222333333321 


Q ss_pred             cCCCeeEEEEccc
Q 021391          105 QGRPLNILINNAG  117 (313)
Q Consensus       105 ~~g~id~lv~~ag  117 (313)
                      ...++|++|.+.|
T Consensus       254 ~g~g~D~vid~~g  266 (410)
T cd08238         254 GGQGFDDVFVFVP  266 (410)
T ss_pred             CCCCCCEEEEcCC
Confidence            1236899999886

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=95.26  E-value=0.087  Score=48.20  Aligned_cols=79  Identities=16%  Similarity=0.154  Sum_probs=51.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .|.++||.|+++++|.++++.+.+.|++|+++.++.++.+.+ +++     +...   ..+..+.+..+.+.+..  ..+
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~~---v~~~~~~~~~~~~~~~~--~~~  233 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA-KEL-----GADA---FVDFKKSDDVEAVKELT--GGG  233 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHc-----CCcE---EEcCCCccHHHHHHHHh--cCC
Confidence            579999999999999999999999999999999887665433 322     2211   12223322222222211  123


Q ss_pred             CeeEEEEccc
Q 021391          108 PLNILINNAG  117 (313)
Q Consensus       108 ~id~lv~~ag  117 (313)
                      ++|+++++.+
T Consensus       234 ~vd~vl~~~~  243 (341)
T cd08297         234 GAHAVVVTAV  243 (341)
T ss_pred             CCCEEEEcCC
Confidence            6999998665

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=95.17  E-value=0.38  Score=43.57  Aligned_cols=115  Identities=17%  Similarity=0.221  Sum_probs=66.2

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCC--CCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           32 AIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIP--SAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        32 ~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      +.|.|| |.+|..++..|+..|. .|++.+++++.++....++.....  ..... +.. -+|.   ++ +       ..
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~-I~~-t~d~---~~-l-------~d   66 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTK-VTG-TNDY---ED-I-------AG   66 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeE-EEE-cCCH---HH-h-------CC
Confidence            468898 8899999999999876 999999997755433333332110  01111 111 0121   11 1       36


Q ss_pred             eeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391          109 LNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus       109 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                      -|++|.++|....+.    ..-...+.-|    +-+.+.+.+.+.+.    ..++.+|++|-..
T Consensus        67 ADiVIit~g~p~~~~----~~r~e~~~~n----~~i~~~i~~~i~~~----~p~~~iIv~sNP~  118 (300)
T cd01339          67 SDVVVITAGIPRKPG----MSRDDLLGTN----AKIVKEVAENIKKY----APNAIVIVVTNPL  118 (300)
T ss_pred             CCEEEEecCCCCCcC----CCHHHHHHHH----HHHHHHHHHHHHHH----CCCeEEEEecCcH
Confidence            799999999753322    1111233333    45666666666664    3356777777554

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=95.15  E-value=0.1  Score=48.90  Aligned_cols=75  Identities=16%  Similarity=0.271  Sum_probs=49.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .|.+++|.|+ +++|..++......|++|++++++.++..+..+++     +...   ..|..+.+.+.    +   ..+
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~l-----Ga~~---~i~~~~~~~v~----~---~~~  241 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRL-----GADS---FLVTTDSQKMK----E---AVG  241 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhC-----CCcE---EEcCcCHHHHH----H---hhC
Confidence            6899999986 89999999988889999999988765433333332     2221   12333322222    1   123


Q ss_pred             CeeEEEEcccC
Q 021391          108 PLNILINNAGI  118 (313)
Q Consensus       108 ~id~lv~~ag~  118 (313)
                      ++|+++.+.|.
T Consensus       242 ~~D~vid~~G~  252 (375)
T PLN02178        242 TMDFIIDTVSA  252 (375)
T ss_pred             CCcEEEECCCc
Confidence            68999999873

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.12  E-value=0.058  Score=48.30  Aligned_cols=50  Identities=28%  Similarity=0.290  Sum_probs=40.9

Q ss_pred             CCCCccchhc-----cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecC
Q 021391           13 SASSTAEEVT-----QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRN   62 (313)
Q Consensus        13 ~~~~~~~~~~-----~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~   62 (313)
                      ..|||..-..     ..++++||+++|.|.|.-+|+-++..|.++|++|.++...
T Consensus       137 ~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~  191 (285)
T PRK14189        137 FRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSK  191 (285)
T ss_pred             CcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCC
Confidence            4566663322     4678999999999999999999999999999999987544

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.09  E-value=0.23  Score=45.67  Aligned_cols=67  Identities=16%  Similarity=0.215  Sum_probs=46.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHH---HHHHHhCCCCceEEEEccCCC
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVR---EAIVKEIPSAKVDAMELDVSS   91 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~---~~l~~~~~~~~~~~~~~D~s~   91 (313)
                      ...+.|+++.|.|. |.||+++|+.|...|++|++.+|+........   .++......+.+.++.+-.+.
T Consensus       141 ~~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~  210 (330)
T PRK12480        141 SKPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANK  210 (330)
T ss_pred             ccccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcH
Confidence            34689999999986 66999999999999999999998865432211   112222224456666665554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	313
3rd5_A	291	Crystal Structure Of A Putative Uncharacterized Pro		3e-27
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		7e-09
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		2e-08
2hrb_A	274	Crystal Structure Of Human Carbonyl Reductase 3, Co		3e-08
1wma_A	276	Crystal Structure Of Human Cbr1 In Complex With Hyd		3e-08
2pfg_A	276	Crystal Structure Of Human Cbr1 In Complex With Big		3e-08
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		4e-08
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		7e-08
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		8e-08
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		9e-08
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		1e-07
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		2e-07
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		3e-07
1n5d_A	288	Crystal Structure Of Porcine Testicular Carbonyl Re		3e-07
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		5e-07
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		6e-07
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		1e-06
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		1e-06
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		1e-06
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		1e-06
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		2e-06
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		2e-06
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		3e-06
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		3e-06
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		4e-06
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		5e-06
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		5e-06
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		5e-06
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		5e-06
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		6e-06
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		6e-06
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		6e-06
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		9e-06
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		9e-06
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		9e-06
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		9e-06
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		1e-05
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-05
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		2e-05
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		3e-05
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-05
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		3e-05
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		4e-05
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		4e-05
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		4e-05
3o26_A	311	The Structure Of Salutaridine Reductase From Papave		4e-05
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		5e-05
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		6e-05
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		6e-05
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		6e-05
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		7e-05
2fwm_X	250	Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih		7e-05
3nyw_A	250	Crystal Structure Of A Betaketoacyl-[acp] Reductase		8e-05
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		9e-05
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		9e-05
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		1e-04
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		1e-04
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		1e-04
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		1e-04
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		1e-04
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-04
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		1e-04
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		1e-04
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		2e-04
1hxh_A	253	Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D		2e-04
1yo6_A	250	Crystal Structure Of The Putative Carbonyl Reductas		2e-04
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		2e-04
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-04
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		2e-04
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		2e-04
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		2e-04
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		2e-04
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		3e-04
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-04
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		3e-04
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		4e-04
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		4e-04
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		4e-04
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-04
1pr9_A	244	Human L-Xylulose Reductase Holoenzyme Length = 244		5e-04
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		5e-04
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		6e-04
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		6e-04
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		6e-04
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		7e-04
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		7e-04
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		7e-04
3d3w_A	244	Structure Of L-Xylulose Reductase With Bound Coenzy		8e-04
3l77_A	235	X-Ray Structure Alcohol Dehydrogenase From Archaeon		9e-04

>pdb|3RD5|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein From Mycobacterium Paratuberculosis Length = 291

Iteration: 1
 Score =  119 bits (297), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/294 (32%), Positives = 139/294 (47%), Gaps = 36/294 (12%)
Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
           T ++TGA+SG+G  TAR LA RG  VIMAVR+   G    EA  + + + +V+  ELD+ 
Sbjct: 18  TVVITGANSGLGAVTARELARRGATVIMAVRDTRKG----EAAARTM-AGQVEVRELDLQ 72
Query: 91  SLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXXXXXD 150
            L+SVR+FA   +      ++LINNAGIMA P+ L+ D  E Q  TN             
Sbjct: 73  DLSSVRRFADGVSGA----DVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLP 128
Query: 151 TMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDES-AYNSFGAYGQSKLANILHA 209
            +           R+V VSS AH   +   I  + +N  S  Y+ + AY QSKLAN+L  
Sbjct: 129 RLTD---------RVVTVSSMAH---WPGRINLEDLNWRSRRYSPWLAYSQSKLANLLFT 176
Query: 210 KELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRG--FCNTVGKLVLKNIPQGAATTC 267
            EL + L   G  + A + HPG   TNL   +G   G    +   ++V  +   GA  T 
Sbjct: 177 SELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMSAATRVVATDADFGARQTL 236
Query: 268 YVALHPQVQGVSGE--------YFSDSNIYKPNSQGQNMELAKKLWDFSMNLVK 313
           Y A     Q + G+        Y   +     + + ++  +A  LW  S  L K
Sbjct: 237 YAA----SQDLPGDSFVGPRFGYLGRTQPVGRSRRAKDAGMAAALWALSEQLTK 286

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 95/210 (45%), Gaps = 29/210 (13%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAM--ELDV 89
           AIVTGAS GIG   A  LA  G  V++   N A      E +  +I +A   A+  + DV
Sbjct: 30  AIVTGASRGIGAAIAARLASDGFTVVI---NYAGKAAAAEEVAGKIEAAGGKALTAQADV 86
Query: 90  SSLASVRK-FASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXXXX 148
           S  A+VR+ FA+   + G  +++L+NNAGI   P     +  +  F              
Sbjct: 87  SDPAAVRRLFATAEEAFG-GVDVLVNNAGI--XPLTTIAETGDAVF---DRVIAVNLKGT 140
Query: 149 XDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILH 208
            +T+++ AQ+    GRI+N S+      +                S+G Y  +K      
Sbjct: 141 FNTLREAAQRLRVGGRIINXSTSQVGLLHP---------------SYGIYAAAKAGVEAX 185
Query: 209 AKELAKHLKEDGVNITANSLHPGSIVTNLF 238
              L+K L+  G +IT N++ PG   T+LF
Sbjct: 186 THVLSKELR--GRDITVNAVAPGPTATDLF 213

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 11/156 (7%)
Query: 31  TAIVTGASSGIGTETA--RVLALRG-VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
           T ++TGAS+GIG  TA   + A  G + +I+A R +   +++++ I +E P+AKV   +L
Sbjct: 35  TVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQL 94
Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAG-IMASPFM--LSKDNIELQFATNXXXXXXX 144
           D++    ++ F      + + ++IL+NNAG  + S  +  ++ ++I+  F TN       
Sbjct: 95  DITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINI 154
Query: 145 XXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG 180
                        ++   G IVN+ S A R AY  G
Sbjct: 155 TQAVLPIF-----QAKNSGDIVNLGSIAGRDAYPTG 185

>pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed With Nadp+ Length = 274

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 107/277 (38%), Gaps = 59/277 (21%)
Query: 31  TAIVTGASSGIGTETARVLALR-GVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDV 89
            A+VTGA+ GIG   AR L  +    V++  R++A G+   + +  E  S +    +LD+
Sbjct: 4   VALVTGANRGIGLAIARELCRQFSGDVVLTARDVARGQAAVQQLQAEGLSPRF--HQLDI 61
Query: 90  SSLASVRKFASEYNSQGRPLNILINNAGIM-----ASPFMLSKDNIELQFATNXXXXXXX 144
             L S+R        +   LN+L+NNA +        PF +     E+   TN       
Sbjct: 62  DDLQSIRALRDFLRKEYGGLNVLVNNAAVAFKSDDPMPFDIKA---EMTLKTNFFATRNM 118
Query: 145 XXXXXDTMKKTAQKSSREGRIVNVSS----------------EAHRFAYSEGIRFDKIND 188
                  MK         GR+VN+SS                  H    +EG   D +  
Sbjct: 119 CNELLPIMKP-------HGRVVNISSLQCLRAFENCSEDLQERFHSETLTEGDLVDLMKK 171
Query: 189 --ESAYNSF--------GAYGQSKLANILHAKELAKHLKE--DGVNITANSLHPGSIVTN 236
             E   N            YG SKL   + ++ LA+ L E      I  N+  PG + T+
Sbjct: 172 FVEDTKNEVHEREGWPNSPYGVSKLGVTVLSRILARRLDEKRKADRILVNACCPGPVKTD 231
Query: 237 LFRYNGILRGFCNTVGKLVLKNIPQGAATTCYVALHP 273
           +              GK  ++ + +GA T  Y+AL P
Sbjct: 232 MD-------------GKDSIRTVEEGAETPVYLALLP 255

>pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp Length = 276

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 119/294 (40%), Gaps = 64/294 (21%)
Query: 32  AIVTGASSGIGTETARVLA-LRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
           A+VTG + GIG    R L  L    V++  R++  G+   + +  E  S +    +LD+ 
Sbjct: 7   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFH--QLDID 64
Query: 91  SLASVRKFASEYNSQGRPLNILINNAGIM-----ASPFMLSKDNIELQFATNXXXXXXXX 145
            L S+R        +   L++L+NNAGI       +PF +     E+   TN        
Sbjct: 65  DLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHI---QAEVTMKTNFFGTRDVC 121
Query: 146 XXXXDTMKKTAQKSSREGRIVNVSS-------EAHRFAYSEGIRFDKINDES---AYNSF 195
                 +K        +GR+VNVSS       ++      +  R + I +E      N F
Sbjct: 122 TELLPLIKP-------QGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKF 174
Query: 196 ----------------GAYGQSKLA----NILHAKELAKHLKEDGVNITANSLHPGSIVT 235
                            AYG +K+     + +HA++L++  K D   I  N+  PG + T
Sbjct: 175 VEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGD--KILLNACCPGWVRT 232
Query: 236 NLFRYNGILRGFCNTVGKLVLKNIPQGAATTCYVA-LHPQVQGVSGEYFSDSNI 288
           ++              G    K+  +GA T  Y+A L P  +G  G++ S+  +
Sbjct: 233 DM-------------AGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVSEKRV 273

>pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2 Length = 276

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 72/294 (24%), Positives = 120/294 (40%), Gaps = 64/294 (21%)
Query: 32  AIVTGASSGIGTETARVLA-LRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
           A+VTG + GIG    R L  L    V++  R++  G+   + +  E  S +    +LD+ 
Sbjct: 7   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFH--QLDID 64
Query: 91  SLASVRKFASEYNSQGRPLNILINNAGIM-----ASPFMLSKDNIELQFATNXXXXXXXX 145
            L S+R        +   L++L+NNAGI       +PF +     E+   TN        
Sbjct: 65  DLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHI---QAEVTMKTNFFGTRDVX 121
Query: 146 XXXXDTMKKTAQKSSREGRIVNVSS-------EAHRFAYSEGIRFDKINDES---AYNSF 195
                 +K        +GR+VNVSS       ++      +  R + I +E      N F
Sbjct: 122 TELLPLIKP-------QGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKF 174
Query: 196 ----------------GAYGQSKLA----NILHAKELAKHLKEDGVNITANSLHPGSIVT 235
                            AYG +K+     + +HA++L++  K D   I  N+  PG + T
Sbjct: 175 VEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGD--KILLNACCPGWVRT 232
Query: 236 NLFRYNGILRGFCNTVGKLVLKNIPQGAATTCYVA-LHPQVQGVSGEYFSDSNI 288
           ++              G    K+  +GA T  Y+A L P  +G  G++ S+  +
Sbjct: 233 DM-------------AGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVSEKRV 273

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 25/209 (11%)
Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVD--AMELD 88
           +A+VTGAS GIG   A  LA  G +V +   N A  K+  EA+V+EI +  VD  A++ +
Sbjct: 12  SALVTGASRGIGRSIALQLAEEGYNVAV---NYAGSKEKAEAVVEEIKAKGVDSFAIQAN 68
Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXXXX 148
           V+    V+    E  SQ   L++L+NNAGI     ++     E     +           
Sbjct: 69  VADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQ 128
Query: 149 XDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILH 208
             T +   Q+S   G I+N+SS               + +    N    Y  +K   I  
Sbjct: 129 KATPQMLRQRS---GAIINLSS-----------VVGAVGNPGQAN----YVATKAGVIGL 170
Query: 209 AKELAKHLKEDGVNITANSLHPGSIVTNL 237
            K  A+ L   G  IT N++ PG IV+++
Sbjct: 171 TKSAARELASRG--ITVNAVAPGFIVSDM 197

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/156 (33%), Positives = 79/156 (50%), Gaps = 32/156 (20%)
Query: 25  IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDA 84
           ID TG T+++TGASSGIG+  AR+L   G  VI++  N        E  +K + +A  D 
Sbjct: 10  IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSN--------EEKLKSLGNALKDN 61
Query: 85  MELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLS-KD---------NIELQF 134
             ++V +LA+ ++  S   S+   L+IL+ NAGI +    +  KD         N++  F
Sbjct: 62  YTIEVCNLAN-KEECSNLISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANF 120
Query: 135 ATNXXXXXXXXXXXXDTMKKTAQKSSREGRIVNVSS 170
             N            + +KK  QK  R GRI+N+SS
Sbjct: 121 ILN-----------REAIKKMIQK--RYGRIINISS 143

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 100/244 (40%), Gaps = 36/244 (14%)
Query: 27  GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAME 86
           G    A+VTGA  GIG E A++LA    HVI   R   +     +++V EI S   ++  
Sbjct: 42  GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSC----DSVVDEIKSFGYESSG 97
Query: 87  L--DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQ--FATNXXXXX 142
              DVS    + +  ++  ++ + ++IL+NNAGI      L   N E +    TN     
Sbjct: 98  YAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLF 157
Query: 143 XXXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSK 202
                    M      ++R GRI+N+SS               I   +       Y  SK
Sbjct: 158 YITQPISKRM-----INNRYGRIINISS---------------IVGLTGNVGQANYSSSK 197
Query: 203 LANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQG 262
              I   K LAK L     NIT N++ PG I +++             + K ++ NIP G
Sbjct: 198 AGVIGFTKSLAKELASR--NITVNAIAPGFISSDM------TDKISEQIKKNIISNIPAG 249
Query: 263 AATT 266
              T
Sbjct: 250 RMGT 253

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 54.3 bits (129), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 36/236 (15%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G TA++TG++ GIG   A      G  V +A  N+ A +    A   EI  A   A+ LD
Sbjct: 5   GKTALITGSARGIGRAFAEAYVREGARVAIADINLEAAR----ATAAEIGPAAC-AIALD 59
Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGI--MASPFMLSKDNIELQFATNXXXXXXXXX 146
           V+  AS+ +  +E   +   ++IL+NNA +  +A    +++++ +  FA N         
Sbjct: 60  VTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQ 119
Query: 147 XXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI 206
                M        R G+I+N++S+A R       R + +         G Y  +K A I
Sbjct: 120 AVARAMI----AGGRGGKIINMASQAGR-------RGEAL--------VGVYCATKAAVI 160
Query: 207 LHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQG 262
              +    +L   G+N+  N++ PG  V +   ++G+   F +       +N+P+G
Sbjct: 161 SLTQSAGLNLIRHGINV--NAIAPG--VVDGEHWDGVDAKFAD------YENLPRG 206

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 34/210 (16%)
Query: 33  IVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAME--LDVS 90
           ++TGAS GIG   AR L + G  +++  R  A      EAI  EI  A   A+   LDV+
Sbjct: 8   LITGASGGIGEGIARELGVAGAKILLGARRQAR----IEAIATEIRDAGGTALAQVLDVT 63
Query: 91  SLASVRKFA-SEYNSQGRPLNILINNAGIMA-SPFMLSK-DNIELQFATNXXXXXXXXXX 147
              SV  FA +  ++ GR +++L+NNAG+M  SP    K D  E     N          
Sbjct: 64  DRHSVAAFAQAAVDTWGR-IDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGA 122
Query: 148 XXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANIL 207
               M     ++ R G+I+N+ S               I   S   +   Y  +K A   
Sbjct: 123 VLPIM-----EAQRSGQIINIGS---------------IGALSVVPTAAVYCATKFA--- 159
Query: 208 HAKELAKHLKEDGVNITANSLHPGSIVTNL 237
             + ++  L+++  NI    ++PG + + L
Sbjct: 160 -VRAISDGLRQESTNIRVTCVNPGVVESEL 188

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 91/213 (42%), Gaps = 35/213 (16%)
Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVD--AMELD 88
           +A+VTGAS GIG   A  LA  G +V +   N A  K+  EA+V+EI +  VD  A++ +
Sbjct: 6   SALVTGASRGIGRSIALQLAEEGYNVAV---NYAGSKEKAEAVVEEIKAKGVDSFAIQAN 62
Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXXXX 148
           V+    V+    E  SQ   L++L+NNAGI     +      E     +           
Sbjct: 63  VADADEVKAXIKEVVSQFGSLDVLVNNAGITRDNLLXRXKEQEWDDVIDTNLKGVFNCIQ 122
Query: 149 XDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQ-----SKL 203
             T +   Q+S   G I+N+S                    S   + G  GQ     +K 
Sbjct: 123 KATPQXLRQRS---GAIINLS--------------------SVVGAVGNPGQANYVATKA 159
Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVTN 236
             I   K  A+ L   G  IT N++ PG IV++
Sbjct: 160 GVIGLTKSAARELASRG--ITVNAVAPGFIVSD 190

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 66/145 (45%), Gaps = 10/145 (6%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G  A+VTGA+ GIG   A  L L+G  V +   N+ AG   + A+ ++    K   ++ D
Sbjct: 7   GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCD 66
Query: 89  VSSLASVRK-FASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXXX 147
           V+    +R  F    +  GR L+IL+NNAG+       ++ N E     N          
Sbjct: 67  VADQQQLRDTFRKVVDHFGR-LDILVNNAGVN------NEKNWEKTLQINLVSVISGTYL 119
Query: 148 XXDTMKKTAQKSSREGRIVNVSSEA 172
             D M K  Q     G I+N+SS A
Sbjct: 120 GLDYMSK--QNGGEGGIIINMSSLA 142

>pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase 20beta-Hydroxysteroid Dehydrogenase Length = 288

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 119/296 (40%), Gaps = 64/296 (21%)
Query: 32  AIVTGASSGIGTETARVLALR-GVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAM--ELD 88
           A+VTGA+ GIG    R L  +    V++  R++A G    +A VK++ +  +     +LD
Sbjct: 7   ALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARG----QAAVKQLQAEGLSPRFHQLD 62
Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIM-----ASPFMLSKDNIELQFATNXXXXXX 143
           +  L S+R        +   L++L+NNA I       +PF +     EL   TN      
Sbjct: 63  IIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQA---ELTMKTNFMGTRN 119
Query: 144 XXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG-------IRFDKINDES---AYN 193
                   +K        +GR+VNVSS     A +E         + + I +E      N
Sbjct: 120 VCTELLPLIKP-------QGRVVNVSSTEGVRALNECSPELQQKFKSETITEEELVGLMN 172
Query: 194 SF----------------GAYGQSKLANILHAKELAKHLKED--GVNITANSLHPGSIVT 235
            F                  YG +K+   + ++  A+ L+E   G  I  N+  PG + T
Sbjct: 173 KFVEDTKNGVHRKEGWSDSTYGVTKIGVSVLSRIYARKLREQRAGDKILLNACCPGWVRT 232
Query: 236 NLFRYNGILRGFCNTVGKLVLKNIPQGAATTCYVALHP-QVQGVSGEYFSDSNIYK 290
           ++              G    K+   GA T  Y+AL P   +G  G++ +D  + +
Sbjct: 233 DMG-------------GPKAPKSPEVGAETPVYLALLPSDAEGPHGQFVTDKKVVE 275

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 27/221 (12%)
Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKE-IPSAKVDAME 86
           +G + I+TG+S+GIG   A + A  G  V +  RN    ++ ++ I+K  +P+ K++A+ 
Sbjct: 25  SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVV 84
Query: 87  LDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDN-IEL---QFATNXXXXX 142
            DV+  +      +   ++   ++IL+NNAG   +    + D  +EL    F  N     
Sbjct: 85  ADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVI 144
Query: 143 XXXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSK 202
                  + + KT      +G IVNVSS               +    A++ +  Y  +K
Sbjct: 145 EMTQKTKEHLIKT------KGEIVNVSS--------------IVAGPQAHSGYPYYACAK 184
Query: 203 LANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI 243
            A   + +  A  L + GV +  NS+ PG++ T      G+
Sbjct: 185 AALDQYTRCTAIDLIQHGVRV--NSVSPGAVATGFMGAMGL 223

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 34/210 (16%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G TA+VTGA+ GIG   A  LA  G  VI++  N    K    +I K     K  A+  D
Sbjct: 6   GKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGK-----KARAIAAD 60
Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQ-----FATNXXXXXX 143
           +S   SV+   +E  +    ++IL+NNA I+  PF ++ D+++L         N      
Sbjct: 61  ISDPGSVKALFAEIQALTGGIDILVNNASIV--PF-VAWDDVDLDHWRKIIDVNLTGTFI 117
Query: 144 XXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKL 203
                 D M+     + + GR+++++S    FA +               +  AY  +K 
Sbjct: 118 VTRAGTDQMR----AAGKAGRVISIASNTF-FAGTP--------------NMAAYVAAKG 158
Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSI 233
             I   + LA  L +   NITAN++ PG I
Sbjct: 159 GVIGFTRALATELGK--YNITANAVTPGLI 186

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 91/220 (41%), Gaps = 32/220 (14%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G + +VTG + GIG   A V A  G +V +A R+ A   D   A + ++ S KV  ++ D
Sbjct: 10  GRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTAD-IDACVADLDQLGSGKVIGVQTD 68
Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIMA-SPF-MLSKDNIELQFATNXXXXXXXXX 146
           VS  A     A     +   ++++  NAG+   +P   ++ + +   FA N         
Sbjct: 69  VSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQ 128
Query: 147 XXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI 206
              D +      +S  GR+V  SS                   + Y  +  YG +K A +
Sbjct: 129 ACLDAL-----IASGSGRVVLTSSITGPI--------------TGYPGWSHYGATKAAQL 169
Query: 207 ----LHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG 242
                 A ELA H       IT N++ PG+I+T     NG
Sbjct: 170 GFMRTAAIELAPH------KITVNAIMPGNIMTEGLLENG 203

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 89/210 (42%), Gaps = 32/210 (15%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSS 91
           A+VTGAS GIG E A  LA +G  V+    + A+ +   E   KE    K   + L++S 
Sbjct: 8   ALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKF-ENSXKE-KGFKARGLVLNISD 65
Query: 92  LASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXXXXXDT 151
           + S++ F +E  ++   ++IL+NNAGI            E Q   N            + 
Sbjct: 66  IESIQNFFAEIKAENLAIDILVNNAGITRDNLXXRXSEDEWQSVIN-TNLSSIFRXSKEC 124
Query: 152 MKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQS-----KLANI 206
           ++   +K  R GRI+++                     S   S G  GQ+     K   I
Sbjct: 125 VRGXXKK--RWGRIISIG--------------------SVVGSAGNPGQTNYCAAKAGVI 162
Query: 207 LHAKELAKHLKEDGVNITANSLHPGSIVTN 236
             +K LA  +     NIT N + PG I T+
Sbjct: 163 GFSKSLAYEVASR--NITVNVVAPGFIATD 190

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 83/208 (39%), Gaps = 24/208 (11%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKV--DAMELDV 89
           A+VTGA+SGIG E AR L   G+ V +  R    G++     +KE+  A V  D    DV
Sbjct: 25  ALVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDV 80
Query: 90  SSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXXXXX 149
            S+  +    +    +  P+++L+NNAG +         + EL                 
Sbjct: 81  RSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELAD-ELWLDVVETNLTGVFRVTK 139
Query: 150 DTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHA 209
             +K         GRIVN++S   +    +G+                Y  SK   +   
Sbjct: 140 QVLKAGGMLERGTGRIVNIASTGGK----QGVVHAA-----------PYSASKHGVVGFT 184
Query: 210 KELAKHLKEDGVNITANSLHPGSIVTNL 237
           K L   L   G  IT N++ PG + T +
Sbjct: 185 KALGLELARTG--ITVNAVCPGFVETPM 210

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 83/208 (39%), Gaps = 24/208 (11%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKV--DAMELDV 89
           A+VTGA+SGIG E AR L   G+ V +  R    G++     +KE+  A V  D    DV
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDV 84
Query: 90  SSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXXXXX 149
            S+  +    +    +  P+++L+NNAG +         + EL                 
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELAD-ELWLDVVETNLTGVFRVTK 143
Query: 150 DTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHA 209
             +K         GRIVN++S   +    +G+                Y  SK   +   
Sbjct: 144 QVLKAGGMLERGTGRIVNIASTGGK----QGVVHAA-----------PYSASKHGVVGFT 188
Query: 210 KELAKHLKEDGVNITANSLHPGSIVTNL 237
           K L   L   G  IT N++ PG + T +
Sbjct: 189 KALGLELARTG--ITVNAVCPGFVETPM 214

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 22/214 (10%)
Query: 33  IVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL--DVS 90
           +VTG S GIG    R+ A +G  V +   N AA ++  +A+V  I  +  +A+ +  DV 
Sbjct: 30  LVTGGSRGIGAAVCRLAARQGWRVGV---NYAANREAADAVVAAITESGGEAVAIPGDVG 86
Query: 91  SLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIE-LQFATNXXXXXXXXXXXX 149
           + A +    S  + Q   L+ L+NNAGI+  P  + + ++E ++                
Sbjct: 87  NAADIAAXFSAVDRQFGRLDGLVNNAGIVDYPQRVDEXSVERIERXLRVNVTGSILCAAE 146
Query: 150 DTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHA 209
              + +   S + G IVNVSS A     +                +  Y  SK A     
Sbjct: 147 AVRRXSRLYSGQGGAIVNVSSXAAILGSA--------------TQYVDYAASKAAIDTFT 192
Query: 210 KELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI 243
             LA+ +  +G+ +  N++ PG I T+L    G+
Sbjct: 193 IGLAREVAAEGIRV--NAVRPGIIETDLHASGGL 224

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 90/206 (43%), Gaps = 28/206 (13%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSS 91
           A++TG ++GIG   A   A+ G  +  A+ ++    +  EA ++ +   +V  ++ DVS 
Sbjct: 10  AVITGGANGIGRAIAERFAVEGADI--AIADLVPAPEA-EAAIRNL-GRRVLTVKCDVSQ 65
Query: 92  LASVRKFASEYNSQGRPLNILINNAGIMA-SPF-MLSKDNIELQFATNXXXXXXXXXXXX 149
              V  F  +  S     +IL+NNAGI    PF  L+ +  +  F  N            
Sbjct: 66  PGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFV 125
Query: 150 DTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHA 209
             MK+        GRI+N++S  +           KI   + Y S      +K ANI   
Sbjct: 126 PGMKRNGW-----GRIINLTSTTYWL---------KIEAYTHYIS------TKAANIGFT 165
Query: 210 KELAKHLKEDGVNITANSLHPGSIVT 235
           + LA  L +DG  IT N++ P  + T
Sbjct: 166 RALASDLGKDG--ITVNAIAPSLVRT 189

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 88/218 (40%), Gaps = 38/218 (17%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G  A+VTGAS GIG   A  LA RG  VI      A  ++  +AI  +   A    + L+
Sbjct: 5   GKIALVTGASRGIGRAIAETLAARGAKVI----GTATSENGAQAI-SDYLGANGKGLMLN 59
Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQ--FATNXXXXXXXXX 146
           V+  AS+     +  ++   ++IL+NNAGI     ++   + E      TN         
Sbjct: 60  VTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSK 119
Query: 147 XXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI 206
                M K      R GRI+ +  +A+                        Y  +K   I
Sbjct: 120 AVMRAMMK-----KRHGRIITIGGQAN------------------------YAAAKAGLI 150
Query: 207 LHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGIL 244
             +K LA+ +   G  IT N + PG I T+  +  GIL
Sbjct: 151 GFSKSLAREVASRG--ITVNVVAPGFIETSDDQRAGIL 186

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 82/208 (39%), Gaps = 24/208 (11%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKV--DAMELDV 89
           A+VTGA+SGIG E AR L   G+ V +  R    G++     +KE+  A V  D    DV
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDV 84
Query: 90  SSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXXXXX 149
            S+  +    +    +  P+++L+NNAG           + EL                 
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELAD-ELWLDVVETNLTGVFRVTK 143
Query: 150 DTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHA 209
             +K         GRIVN++S   +    +G+                Y  SK   +   
Sbjct: 144 QVLKAGGMLERGTGRIVNIASTGGK----QGVVHAA-----------PYSASKHGVVGFT 188
Query: 210 KELAKHLKEDGVNITANSLHPGSIVTNL 237
           K L   L   G  IT N++ PG + T +
Sbjct: 189 KALGLELARTG--ITVNAVCPGWVETPM 214

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 82/208 (39%), Gaps = 24/208 (11%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKV--DAMELDV 89
           A+VTGA+SGIG E AR L   G+ V +  R    G++     +KE+  A V  D    DV
Sbjct: 9   ALVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDV 64
Query: 90  SSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXXXXX 149
            S+  +    +    +  P+++L+NNAG           + EL                 
Sbjct: 65  RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELAD-ELWLDVVETNLTGVFRVTK 123
Query: 150 DTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHA 209
             +K         GRIVN++S   +    +G+                Y  SK   +   
Sbjct: 124 QVLKAGGMLERGTGRIVNIASTGGK----QGVVHAA-----------PYSASKHGVVGFT 168
Query: 210 KELAKHLKEDGVNITANSLHPGSIVTNL 237
           K L   L   G  IT N++ PG + T +
Sbjct: 169 KALGLELARTG--ITVNAVCPGFVETPM 194

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 82/208 (39%), Gaps = 24/208 (11%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKV--DAMELDV 89
           A+VTGA+SGIG E AR L   G+ V +  R    G++     +KE+  A V  D    DV
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDV 84
Query: 90  SSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXXXXX 149
            S+  +    +    +  P+++L+NNAG           + EL                 
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELAD-ELWLDVVETNLTGVFRVTK 143
Query: 150 DTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHA 209
             +K         GRIVN++S   +    +G+                Y  SK   +   
Sbjct: 144 QVLKAGGMLERGTGRIVNIASTGGK----QGVVHAA-----------PYSASKHGVVGFT 188
Query: 210 KELAKHLKEDGVNITANSLHPGSIVTNL 237
           K L   L   G  IT N++ PG + T +
Sbjct: 189 KALGLELARTG--ITVNAVCPGFVETPM 214

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 82/208 (39%), Gaps = 24/208 (11%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKV--DAMELDV 89
           A+VTGA+SGIG E AR L   G+ V +  R    G++     +KE+  A V  D    DV
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDV 84
Query: 90  SSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXXXXX 149
            S+  +    +    +  P+++L+NNAG           + EL                 
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELAD-ELWLDVVETNLTGVFRVTK 143
Query: 150 DTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHA 209
             +K         GRIVN++S   +    +G+                Y  SK   +   
Sbjct: 144 QVLKAGGMLERGTGRIVNIASTGGK----QGVVHAA-----------PYSASKHGVVGFT 188
Query: 210 KELAKHLKEDGVNITANSLHPGSIVTNL 237
           K L   L   G  IT N++ PG + T +
Sbjct: 189 KALGLELARTG--ITVNAVCPGFVETPM 214

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 79/208 (37%), Gaps = 24/208 (11%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKV--DAMELDV 89
           A+VTGA+SGIG E AR L   G+ V +  R    G++     +KE+  A V  D    DV
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDV 84
Query: 90  SSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXXXXX 149
            S+  +    +    +  P+++L+NNAG           + EL                 
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELAD-ELWLDVVETNLTGVFRVTK 143
Query: 150 DTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHA 209
             +K         GRIVN++S   +                       Y  SK   +   
Sbjct: 144 QVLKAGGMLERGTGRIVNIASTGGK---------------QGLVHAAPYSASKHGVVGFT 188
Query: 210 KELAKHLKEDGVNITANSLHPGSIVTNL 237
           K L   L   G  IT N++ PG + T +
Sbjct: 189 KALGLELARTG--ITVNAVCPGFVETPM 214

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 82/208 (39%), Gaps = 24/208 (11%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKV--DAMELDV 89
           A+VTGA+SGIG E AR L   G+ V +  R    G++     +KE+  A V  D    DV
Sbjct: 25  ALVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDV 80
Query: 90  SSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXXXXX 149
            S+  +    +    +  P+++L+NNAG           + EL                 
Sbjct: 81  RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELAD-ELWLDVVETNLTGVFRVTK 139
Query: 150 DTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHA 209
             +K         GRIVN++S   +    +G+                Y  SK   +   
Sbjct: 140 QVLKAGGMLERGTGRIVNIASTGGK----QGVVHAA-----------PYSASKHGVVGFT 184
Query: 210 KELAKHLKEDGVNITANSLHPGSIVTNL 237
           K L   L   G  IT N++ PG + T +
Sbjct: 185 KALGLELARTG--ITVNAVCPGFVETPM 210

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 86/209 (41%), Gaps = 24/209 (11%)
Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAMELD 88
           TA VTG SSGIG   AR LA RG+ V    R+    K+V  A V  + +A   VD    D
Sbjct: 26  TAFVTGVSSGIGLAVARTLAARGIAVYGCARDA---KNV-SAAVDGLRAAGHDVDGSSCD 81
Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXXXX 148
           V+S   V    +    +  P+ IL+N+AG          D+  L                
Sbjct: 82  VTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDD-ALWADVLDTNLTGVFRVT 140
Query: 149 XDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILH 208
            + ++    + +  GRIVN++S   +    +G+ +              Y  SK   +  
Sbjct: 141 REVLRAGGMREAGWGRIVNIASTGGK----QGVMYAA-----------PYTASKHGVVGF 185
Query: 209 AKELAKHLKEDGVNITANSLHPGSIVTNL 237
            K +   L + G  IT N++ PG + T +
Sbjct: 186 TKSVGFELAKTG--ITVNAVCPGYVETPM 212

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 34/210 (16%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G TA+VTGA+ GIG   A  LA  G  VI++  N    K    +I K     K  A+  D
Sbjct: 6   GKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGK-----KARAIAAD 60
Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQ-----FATNXXXXXX 143
           +S   SV+   +E  +    ++IL+NNA I+  PF+ + D+++L         N      
Sbjct: 61  ISDPGSVKALFAEIQALTGGIDILVNNASIV--PFV-AWDDVDLDHWRKIIDVNLTGTFI 117
Query: 144 XXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKL 203
                 D  +     + + GR+++++S    FA +               +  AY  +K 
Sbjct: 118 VTRAGTDQXR----AAGKAGRVISIASNTF-FAGTP--------------NXAAYVAAKG 158
Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSI 233
             I   + LA  L +   NITAN++ PG I
Sbjct: 159 GVIGFTRALATELGK--YNITANAVTPGLI 186

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 86/207 (41%), Gaps = 24/207 (11%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G TA+VTGA SGIG   A   A  G HV+   R     K+V + I     SA  +A+  D
Sbjct: 31  GRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGV-KEVADEIADGGGSA--EAVVAD 87
Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXXXX 148
           ++ L      A E  +  R +++L+NNAGI+A       + + L                
Sbjct: 88  LADLEGAANVAEELAAT-RRVDVLVNNAGIIARA---PAEEVSLGRWREVLTVNLDAAWV 143
Query: 149 XDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILH 208
                 TA  +   GRIV ++S     ++  G             +  AY  SK A +  
Sbjct: 144 LSRSFGTAMLAHGSGRIVTIAS---MLSFQGG------------RNVAAYAASKHAVVGL 188
Query: 209 AKELAKHLKEDGVNITANSLHPGSIVT 235
            + LA      GV +  N+L PG +VT
Sbjct: 189 TRALASEWAGRGVGV--NALAPGYVVT 213

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 87/218 (39%), Gaps = 39/218 (17%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G  A+VTGAS GIG   A  LA RG  VI      A  ++  +AI  +   A    + L+
Sbjct: 5   GKIALVTGASRGIGRAIAETLAARGAKVI----GTATSENGAQAI-SDYLGANGKGLMLN 59
Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQ--FATNXXXXXXXXX 146
           V+  AS+     +  ++   ++IL+NNAGI     ++   + E      TN         
Sbjct: 60  VTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSK 119
Query: 147 XXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN- 205
                M K      R GRI+ +                     S   + G  GQ+  A  
Sbjct: 120 AVMRAMMK-----KRHGRIITIG--------------------SVVGTMGNGGQANFAAA 154
Query: 206 ----ILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
               I  +K LA+ +   G  IT N + PG I T++ R
Sbjct: 155 KAGLIGFSKSLAREVASRG--ITVNVVAPGFIETDMTR 190

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 86/213 (40%), Gaps = 29/213 (13%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G  A+VTGAS GIG   A  LA RG  VI      A  ++  +AI  +   A    + L+
Sbjct: 5   GKIALVTGASRGIGRAIAETLAARGAKVI----GTATSENGAQAI-SDYLGANGKGLMLN 59
Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQ--FATNXXXXXXXXX 146
           V+  AS+     +  ++   ++IL+NNAGI     ++   + E      TN         
Sbjct: 60  VTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSK 119
Query: 147 XXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI 206
                M K      R GRI+ + S                N   A      Y  +K   I
Sbjct: 120 AVMRAMMK-----KRHGRIITIGSVVGTMG----------NGGQAN-----YAAAKAGLI 159
Query: 207 LHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
             +K LA+ +   G  IT N + PG I T++ R
Sbjct: 160 GFSKSLAREVASRG--ITVNVVAPGFIETDMTR 190

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 86/215 (40%), Gaps = 22/215 (10%)
Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G  A+VTG S GIG   A+ L   G  V +  R+  A  D    +          A+  
Sbjct: 28  AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY---GDCQAIPA 84
Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSK--DNIELQFATNXXXXXXXX 145
           D+SS A  R+ A         L+IL+NNAG      + S      E     N        
Sbjct: 85  DLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCI 144
Query: 146 XXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
                 ++++A  +    R++N+ S A       GI       E AY    AYG SK A 
Sbjct: 145 QQLLPLLRRSA-SAENPARVINIGSVA-------GI---SAMGEQAY----AYGPSKAAL 189
Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY 240
              ++ LAK L  + +N+  N + PG   + + R+
Sbjct: 190 HQLSRMLAKELVGEHINV--NVIAPGRFPSRMTRH 222

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 90/213 (42%), Gaps = 29/213 (13%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL- 87
           G  A+VTGAS GIG   A  LA +G +V++   N A  +     +V EI     DA+ + 
Sbjct: 4   GKVALVTGASRGIGRAIAIDLAKQGANVVV---NYAGNEQKANEVVDEIKKLGSDAIAVR 60
Query: 88  -DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFM--LSKDNIELQFATNXXXXXXX 144
            DV++   V     +       ++IL+NNAG+     +  + ++  +    TN       
Sbjct: 61  ADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLC 120
Query: 145 XXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
                  M +      R GRIVN++S         G+  +           G  G +K +
Sbjct: 121 TKAVSRFMMR-----QRHGRIVNIASVV-------GVTGNPGQANYVAAKAGVIGLTKTS 168
Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
               AKELA        NIT N++ PG I T++
Sbjct: 169 ----AKELASR------NITVNAIAPGFIATDM 191

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 84/213 (39%), Gaps = 28/213 (13%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA----KVDAMEL 87
           A+VTGAS GIG   AR L  +G+ V+   R +       E +  E  SA     +     
Sbjct: 35  ALVTGASGGIGAAVARALVQQGLKVVGCARTVGN----IEELAAECKSAGYPGTLIPYRC 90
Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFML--SKDNIELQFATNXXXXXXXX 145
           D+S+   +    S   SQ   ++I INNAG+     +L  S    +  F  N        
Sbjct: 91  DLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICT 150
Query: 146 XXXXDTMKKTAQKSSREGRIVNVSS-EAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
                +MK   +++  +G I+N++S   HR        F              Y  +K A
Sbjct: 151 REAYQSMK---ERNVDDGHIININSMSGHRVLPLSVTHF--------------YSATKYA 193
Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
                + L + L+E   +I A  + PG + T  
Sbjct: 194 VTALTEGLRQELREAQTHIRATCISPGVVETQF 226

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 86/216 (39%), Gaps = 35/216 (16%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVD---AM 85
           G  A+VTGAS GIG   A +LA RG  VI        G    E+  + I     D    M
Sbjct: 12  GKVALVTGASRGIGKAIAELLAERGAKVI--------GTATSESGAQAISDYLGDNGKGM 63
Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQ--FATNXXXXXX 143
            L+V++  S+         +   ++IL+NNAGI     ++     E      TN      
Sbjct: 64  ALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFR 123
Query: 144 XXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKL 203
                   M K      R+GRI+NV S               + +    N    Y  +K 
Sbjct: 124 LSKAVLRGMMK-----KRQGRIINVGS-----------VVGTMGNAGQAN----YAAAKA 163
Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
             I   K +A+ +   GV  T N++ PG+I T++ +
Sbjct: 164 GVIGFTKSMAREVASRGV--TVNTVAPGAIETDMTK 197

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 97/229 (42%), Gaps = 45/229 (19%)
Query: 21  VTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKE---- 76
           +T   D TG TA+VTG++ G+G   A  LA  G  VI+         D+R  ++ E    
Sbjct: 1   MTALFDLTGKTALVTGSARGLGFAYAEGLAAAGARVIL--------NDIRATLLAESVDT 52
Query: 77  IPSAKVDA--MELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFM--LSKDNIEL 132
           +     DA  +  DV+   ++    S+ +++G  ++ILINNAGI     M  L  +N + 
Sbjct: 53  LTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQK 112
Query: 133 QFATNXXXXXXXXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAY 192
              TN              M   A+ S   G+I+N+ S               +  ++A 
Sbjct: 113 VIDTNLTSAFLVSRSAAKRM--IARNSG--GKIINIGS---------------LTSQAAR 153
Query: 193 NSFGAY----GQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
            +   Y    G  K+     A E A+       NI  N++ PG I+T++
Sbjct: 154 PTVAPYTAAKGGIKMLTCSMAAEWAQF------NIQTNAIGPGYILTDM 196

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 91/216 (42%), Gaps = 30/216 (13%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIM-AVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
           G  A+VTG++SGIG   A  LA +G  +++    + A  + VR  +  +    KV     
Sbjct: 4   GKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQ-HGVKVLYDGA 62
Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFM--LSKDNIELQFATNXXXXXXXX 145
           D+S   +VR        Q   ++IL+NNAGI  +  +     +  +   A N        
Sbjct: 63  DLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGT 122
Query: 146 XXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNS--FGAYGQSKL 203
                 MKK        GRI+N++S AH    S         ++SAY +   G  G +K+
Sbjct: 123 AAALPHMKKQG-----FGRIINIAS-AHGLVASA--------NKSAYVAAKHGVVGFTKV 168
Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
                       L+  G  ITAN++ PG + T L  
Sbjct: 169 ----------TALETAGQGITANAICPGWVRTPLVE 194

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 85/221 (38%), Gaps = 45/221 (20%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVD---AM 85
           G  A+VTGAS GIG   A +LA RG  VI        G    E+  + I     D    M
Sbjct: 12  GKVALVTGASRGIGKAIAELLAERGAKVI--------GTATSESGAQAISDYLGDNGKGM 63
Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQ--FATNXXXXXX 143
            L+V++  S+         +   ++IL+NNAGI     ++     E      TN      
Sbjct: 64  ALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFR 123
Query: 144 XXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKL 203
                   M K      R+GRI+NV                     S   + G  GQ+  
Sbjct: 124 LSKAVLRGMMK-----KRQGRIINVG--------------------SVVGTMGNAGQANF 158
Query: 204 AN-----ILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
           A      I   K +A+ +   GV  T N++ PG I T++ +
Sbjct: 159 AAAKAGVIGFTKSMAREVASRGV--TVNTVAPGFIETDMTK 197

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 87/209 (41%), Gaps = 21/209 (10%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G  ++VTG++ GIG   A  LA  G  VI+   +    K V E I  +    K   +E++
Sbjct: 7   GKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKY-GVKAHGVEMN 65
Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXXXX 148
           + S  S+ K   E  +    ++IL+NNAGI      L    ++ +               
Sbjct: 66  LLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQ 125
Query: 149 XDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILH 208
               K   Q   R GRIVN+SS    F  + G    ++N          Y  +K   I  
Sbjct: 126 NSLRKMIKQ---RWGRIVNISSVVG-FTGNVG----QVN----------YSTTKAGLIGF 167
Query: 209 AKELAKHLKEDGVNITANSLHPGSIVTNL 237
            K LAK L     N+  N++ PG I T++
Sbjct: 168 TKSLAKELAPR--NVLVNAVAPGFIETDM 194

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 83/210 (39%), Gaps = 26/210 (12%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAME 86
           G TA VTG S GIG   A+ LAL G  V +   N A   +  +A+V EI  A  +  A+ 
Sbjct: 31  GKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAA---ERAQAVVSEIEQAGGRAVAIR 87
Query: 87  LDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXX 146
            D     ++ +   E       L+IL+N+AGI  S  +      E   A           
Sbjct: 88  ADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLE-----ETTVADFDEVXAVNFR 142
Query: 147 XXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI 206
                ++  ++     GRI+ + S         GI                Y  SK A  
Sbjct: 143 APFVAIRSASRHLGDGGRIITIGSNLAELVPWPGISL--------------YSASKAALA 188
Query: 207 LHAKELAKHLKEDGVNITANSLHPGSIVTN 236
              K LA+ L   G  IT N +HPGS  T+
Sbjct: 189 GLTKGLARDLGPRG--ITVNIVHPGSTDTD 216

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 85/216 (39%), Gaps = 35/216 (16%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVD---AM 85
           G  A+VTGAS GIG   A +LA RG  VI        G    E+  + I     D    M
Sbjct: 12  GKVALVTGASRGIGKAIAELLAERGAKVI--------GTATSESGAQAISDYLGDNGKGM 63
Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQ--FATNXXXXXX 143
            L+V++  S+         +   ++IL+NNAGI     ++     E      TN      
Sbjct: 64  ALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFR 123
Query: 144 XXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKL 203
                   M K      R+GRI+NV S               + +    N    Y  +K 
Sbjct: 124 LSKAVLRGMMK-----KRQGRIINVGS-----------VVGTMGNAGQAN----YAAAKA 163
Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
             I   K +A+ +   GV  T N++ PG I T++ +
Sbjct: 164 GVIGFTKSMAREVASRGV--TVNTVAPGFIETDMTK 197

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 86/210 (40%), Gaps = 35/210 (16%)
Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
           + +VTG + GIG   A+ LA  G  V +  R   A K +               +E DV+
Sbjct: 17  SVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-------------GVECDVT 63
Query: 91  SLASV-RKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXXXXX 149
              +V R F +    QG P+ +L++NAG+ A  F++     + +   N            
Sbjct: 64  DSDAVDRAFTAVEEHQG-PVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAF----- 117
Query: 150 DTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHA 209
               + AQ++SR            R  +   I    ++      +   Y  SK   I  A
Sbjct: 118 ----RVAQRASR---------SMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMA 164
Query: 210 KELAKHLKEDGVNITANSLHPGSIVTNLFR 239
           + +A+ L +   N+TAN + PG I T++ R
Sbjct: 165 RSIARELSK--ANVTANVVAPGYIDTDMTR 192

>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver Somniferum Length = 311

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
            A+VTG + GIG E  + L+  G+ V++  R++  G +  E + K      V   +LDV+
Sbjct: 14  CAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKL-KNSNHENVVFHQLDVT 72
Query: 91  S-LASVRKFASEYNSQGRPLNILINNAGI 118
             +A++   A    +    L+IL+NNAG+
Sbjct: 73  DPIATMSSLADFIKTHFGKLDILVNNAGV 101

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKE-IPSAKVDAMELDVS 90
           AI+TG+S+GIG  TA + A  G  V +  R+    ++ R+ I+   +    V+++  DV+
Sbjct: 9   AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVT 68
Query: 91  SLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSK----DNIELQFATNXXXXXXXXX 146
           + A   +  S    +   L+IL+NNAG  A P   SK     +IE   AT          
Sbjct: 69  TDAGQDEILSTTLGKFGKLDILVNNAG-AAIPDSQSKTGTAQSIESYDATLNLNLRSVIA 127
Query: 147 XXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI 206
               T K     SS +G IVN+SS A                  A   F  Y  +K A  
Sbjct: 128 L---TKKAVPHLSSTKGEIVNISSIASGL--------------HATPDFPYYSIAKAAID 170
Query: 207 LHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
            + +  A  L + G+ +  NS+ PG + T  
Sbjct: 171 QYTRNTAIDLIQHGIRV--NSISPGLVATGF 199

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 40/87 (45%)
Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
            A+VTG SSGIG  T  +L   G  V    R+    +    A+ +  P A++ A   DV 
Sbjct: 10  VAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVL 69
Query: 91  SLASVRKFASEYNSQGRPLNILINNAG 117
               VR FA          +IL+NNAG
Sbjct: 70  DALQVRAFAEACERTLGCASILVNNAG 96

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 104/237 (43%), Gaps = 37/237 (15%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAM--E 86
           G TAIVTG+S G+G   A  L   G ++++   N +      +A  +E  +A ++ +  +
Sbjct: 5   GKTAIVTGSSRGLGKAIAWKLGNMGANIVL---NGSPASTSLDATAEEFKAAGINVVVAK 61
Query: 87  LDVSSLASVRKFA-SEYNSQGRPLNILINNAGIMASPFML--SKDNIELQFATNXXXXXX 143
            DV +   V     +  ++ GR ++IL+NNAGI     ML  S+ + +    TN      
Sbjct: 62  GDVKNPEDVENMVKTAMDAFGR-IDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYL 120
Query: 144 XXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKL 203
                   M K  QKS   G+I+N++S A       GI    I +    N    Y  SK 
Sbjct: 121 CTKAVSKIMLK--QKS---GKIINITSIA-------GI----IGNAGQAN----YAASKA 160
Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIP 260
             I   K +AK     G  I  N++ PG I T++           + V ++ L NIP
Sbjct: 161 GLIGFTKSIAKEFAAKG--IYCNAVAPGIIKTDMTDV------LPDKVKEMYLNNIP 209

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 87/210 (41%), Gaps = 35/210 (16%)
Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
           + +VTG + GIG   A+ LA  G  V +  R   A K +               +E+DV+
Sbjct: 17  SVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-------------GVEVDVT 63
Query: 91  SLASV-RKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXXXXX 149
              +V R F +    QG P+ +L++NAG+ A  F++     + +   N            
Sbjct: 64  DSDAVDRAFTAVEEHQG-PVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAF----- 117
Query: 150 DTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHA 209
               + AQ++SR            R  +   I    ++      +   Y  SK   I  A
Sbjct: 118 ----RVAQRASR---------SMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMA 164
Query: 210 KELAKHLKEDGVNITANSLHPGSIVTNLFR 239
           + +A+ L +   N+TAN + PG I T++ R
Sbjct: 165 RSIARELSK--ANVTANVVAPGYIDTDMTR 192

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 47/216 (21%)
Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
           + +VTG + GIG   A+ LA  G  V +  R   A K +               +E+DV+
Sbjct: 37  SVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-------------GVEVDVT 83
Query: 91  SLASV-RKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXXXXX 149
              +V R F +    QG P+ +L++NAG+ A  F++     + +   N            
Sbjct: 84  DSDAVDRAFTAVEEHQG-PVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAF----- 137
Query: 150 DTMKKTAQKSSRE------GRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKL 203
               + AQ++SR       GR++ ++S +  +          I +++ Y +      SK 
Sbjct: 138 ----RVAQRASRSMQRNKFGRMIFIASVSGLWG---------IGNQANYAA------SKA 178
Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
             I  A+ +A+ L +   N+TAN + PG I T++ R
Sbjct: 179 GVIGMARSIARELSK--ANVTANVVAPGYIDTDMTR 212

>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 89/217 (41%), Gaps = 36/217 (16%)
Query: 25  IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDA 84
           +D +G    VTGA  GIG  TA      G  V         G D  +A  +E      + 
Sbjct: 3   MDFSGKNVWVTGAGKGIGYATALAFVEAGAKV--------TGFD--QAFTQEQYPFATEV 52
Query: 85  MELDVSSLASVRKFASEYNSQGRPLNILINNAGI--MASPFMLSKDNIELQFATNXXXXX 142
           M  DV+  A V +      ++   L+ L+N AGI  M +   LSK++ +  FA N     
Sbjct: 53  M--DVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAF 110
Query: 143 XXXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSK 202
                  +  ++      R G IV V+S+A   A++  I               AYG SK
Sbjct: 111 NLFQQTMNQFRR-----QRGGAIVTVASDA---AHTPRI------------GMSAYGASK 150
Query: 203 LANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
            A  L +  L+  L+  G  +  N + PGS  T++ R
Sbjct: 151 AA--LKSLALSVGLELAGSGVRCNVVSPGSTDTDMQR 185

>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 89/219 (40%), Gaps = 36/219 (16%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIV---KEIPSAKVDAMELD 88
           AI+TGAS GIG   A  LA  G  V++  R+    + V + I    K +    V  + LD
Sbjct: 10  AIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIXRSNKHVQEPIV--LPLD 67
Query: 89  VSSLASVRKFASEYNSQGRPLNILINNA-----GIMASPFMLSKDNIELQFATNXXXXXX 143
           ++          + + +   ++IL+N A     G ++ P     DN       N      
Sbjct: 68  ITDCTKADTEIKDIHQKYGAVDILVNAAAXFXDGSLSEPV----DNFRKIXEINVIAQYG 123
Query: 144 XXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKL 203
                 +       K  + G I NV+S A ++ +++G               G YG +K 
Sbjct: 124 ILKTVTEIX-----KVQKNGYIFNVASRAAKYGFADG---------------GIYGSTKF 163
Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG 242
           A +  A+ L + L   G+ +T  +L PG + T+  +  G
Sbjct: 164 ALLGLAESLYRELAPLGIRVT--TLCPGWVNTDXAKKAG 200

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 91/216 (42%), Gaps = 30/216 (13%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIM-AVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
           G  A+VTG++SGIG   A  LA +G  +++    + A  + VR  +  +    KV     
Sbjct: 4   GKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQ-HGVKVLYDGA 62
Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFM--LSKDNIELQFATNXXXXXXXX 145
           D+S   +VR        Q   ++IL+NNAGI  +  +     +  +   A N        
Sbjct: 63  DLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGT 122
Query: 146 XXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNS--FGAYGQSKL 203
                 MKK        GRI+N++S AH    S         ++SAY +   G  G +K+
Sbjct: 123 AAALPHMKKQG-----FGRIINIAS-AHGLVASA--------NKSAYVAAKHGVVGFTKV 168
Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
                       L+  G  ITAN++ PG + + L  
Sbjct: 169 ----------TALETAGQGITANAICPGWVRSPLVE 194

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 89/210 (42%), Gaps = 30/210 (14%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIM-AVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
           G  A+VTG++SGIG   A  LA +G  +++    + A  + VR  +  +    KV     
Sbjct: 4   GKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQ-HGVKVLYDGA 62
Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFM--LSKDNIELQFATNXXXXXXXX 145
           D+S   +VR        Q   ++IL+NNAGI  +  +     +  +   A N        
Sbjct: 63  DLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGT 122
Query: 146 XXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNS--FGAYGQSKL 203
                 MKK        GRI+N++S AH    S         ++SAY +   G  G +K+
Sbjct: 123 AAALPHMKKQG-----FGRIINIAS-AHGLVASA--------NKSAYVAAKHGVVGFTKV 168
Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSI 233
                       L+  G  ITAN++ PG +
Sbjct: 169 ----------TALETAGQGITANAICPGWV 188

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 104/257 (40%), Gaps = 30/257 (11%)
Query: 33  IVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSL 92
           IVTG+  GIG   A  LA  G  V++A  N  A + V + IV +  +A   ++ +DVS  
Sbjct: 13  IVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAI--SVAVDVSDP 70
Query: 93  ASVRKFASEYNSQGRPLNILINNAGI---MASPFMLSKDNIELQFATNXXXXXXXXXXXX 149
            S +  A    ++   ++ L+NNA I   M   F+L+ D  E                  
Sbjct: 71  ESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDP-EYYKKFMSVNLDGALWCTR 129
Query: 150 DTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHA 209
              KK  ++    G IVN SS A                   Y+++  YG +K+      
Sbjct: 130 AVYKKMTKRGG--GAIVNQSSTAAWL----------------YSNY--YGLAKVGINGLT 169
Query: 210 KELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNI--PQGAATTC 267
           ++L++ L   G NI  N++ PG I T   R         + V  L L  +  P      C
Sbjct: 170 QQLSRELG--GRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPLSRMGTPDDLVGMC 227
Query: 268 YVALHPQVQGVSGEYFS 284
              L  +   ++G+ F+
Sbjct: 228 LFLLSDEASWITGQIFN 244

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 34/218 (15%)
Query: 26  DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREA--IVKEIPSAKVD 83
           D  G TA+VTG+S G+G   A  LA+ G  +++       G D       V+E  +   D
Sbjct: 23  DLGGRTALVTGSSRGLGRAMAEGLAVAGARILI------NGTDPSRVAQTVQEFRNVGHD 76
Query: 84  --AMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXX 141
             A+  DV+S + + +  +  + QG  ++IL+NNAGI        K  IEL+ A      
Sbjct: 77  AEAVAFDVTSESEIIEAFARLDEQGIDVDILVNNAGI-----QFRKPMIELETADWQRVI 131
Query: 142 XXXXXXXXDTMKKTAQKSSRE--GRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYG 199
                      ++ A++      G+IVN+ S               +  E A  +   Y 
Sbjct: 132 DTNLTSAFMIGREAAKRMIPRGYGKIVNIGS---------------LTSELARATVAPYT 176
Query: 200 QSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
            +K    +  + +A    + G  I AN++ PG ++T++
Sbjct: 177 VAKGGIKMLTRAMAAEWAQYG--IQANAIGPGYMLTDM 212

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 32/215 (14%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAME-- 86
           G TA+VTG++SGIG   A+VLA  G ++++       G       + EI    V A+   
Sbjct: 4   GKTALVTGSTSGIGLGIAQVLARAGANIVL------NGFGDPAPALAEIARHGVKAVHHP 57
Query: 87  LDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXX 146
            D+S +A +    +    +   ++IL+NNAGI     +   +   L+             
Sbjct: 58  ADLSDVAQIEALFALAEREFGGVDILVNNAGIQ---HVAPVEQFPLESWDKIIALNLSAV 114
Query: 147 XXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNS--FGAYGQSKLA 204
                +     ++   GRI+N++S  H    S G        ++AY +   G  G +K+ 
Sbjct: 115 FHGTRLALPGMRARNWGRIINIAS-VHGLVGSTG--------KAAYVAAKHGVVGLTKVV 165
Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
            +  A            N+T N++ PG ++T L +
Sbjct: 166 GLETATS----------NVTCNAICPGWVLTPLVQ 190

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 85/209 (40%), Gaps = 27/209 (12%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSS 91
           A+VTGAS GIG   A  LA  G  V +   + +AG              +  A++ DVS 
Sbjct: 31  ALVTGASRGIGRAIALELAAAGAKVAVNYAS-SAGAADEVVAAIAAAGGEAFAVKADVSQ 89
Query: 92  LASVRK-FASEYNSQGRPLNILINNAGIMASPFML--SKDNIELQFATNXXXXXXXXXXX 148
            + V   FA+     GR L++L+NNAGI     +L   +D+ +     N           
Sbjct: 90  ESEVEALFAAVIERWGR-LDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAA 148
Query: 149 XDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILH 208
              M K      R GRI+N++S               +  E        Y  +K   I  
Sbjct: 149 AKIMLK-----QRSGRIINIAS---------------VVGEMGNPGQANYSAAKAGVIGL 188
Query: 209 AKELAKHLKEDGVNITANSLHPGSIVTNL 237
            K +AK L   G  IT N++ PG I T++
Sbjct: 189 TKTVAKELASRG--ITVNAVAPGFIATDM 215

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G  AIVTGA+ GIG   A V A  G HV+ A+   +A +++ E   K        A+ LD
Sbjct: 197 GKVAIVTGAARGIGATIAEVFARDGAHVV-AIDVESAAENLAETASK----VGGTALWLD 251
Query: 89  VSSLASVRKFASEY-NSQGRPLNILINNAGIMASPFMLSKDN 129
           V++  +V K +    +  G   +IL+NNAGI     + + D+
Sbjct: 252 VTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDD 293

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G  AIVTGA+ GIG   A V A  G HV+ A+   +A +++ E   K        A+ LD
Sbjct: 234 GKVAIVTGAARGIGATIAEVFARDGAHVV-AIDVESAAENLAETASK----VGGTALWLD 288
Query: 89  VSSLASVRKFASEY-NSQGRPLNILINNAGIMASPFMLSKDN 129
           V++  +V K +    +  G   +IL+NNAGI     + + D+
Sbjct: 289 VTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDD 330

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G  AIVTGA+ GIG   A V A  G HV+ A+   +A +++ E   K        A+ LD
Sbjct: 213 GKVAIVTGAARGIGATIAEVFARDGAHVV-AIDVESAAENLAETASK----VGGTALWLD 267
Query: 89  VSSLASVRKFASEY-NSQGRPLNILINNAGIMASPFMLSKDN 129
           V++  +V K +    +  G   +IL+NNAGI     + + D+
Sbjct: 268 VTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDD 309

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G  AIVTGA+ GIG   A V A  G HV+ A+   +A +++ E   K        A+ LD
Sbjct: 205 GKVAIVTGAARGIGATIAEVFARDGAHVV-AIDVESAAENLAETASK----VGGTALWLD 259
Query: 89  VSSLASVRKFASEY-NSQGRPLNILINNAGIMASPFMLSKDN 129
           V++  +V K +    +  G   +IL+NNAGI     + + D+
Sbjct: 260 VTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDD 301

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G  AIVTGA+ GIG   A V A  G HV+ A+   +A +++ E   K        A+ LD
Sbjct: 221 GKVAIVTGAARGIGATIAEVFARDGAHVV-AIDVESAAENLAETASK----VGGTALWLD 275
Query: 89  VSSLASVRKFASEY-NSQGRPLNILINNAGIMASPFMLSKDN 129
           V++  +V K +    +  G   +IL+NNAGI     + + D+
Sbjct: 276 VTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDD 317

>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 83/219 (37%), Gaps = 40/219 (18%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDV------REAIVKEIPSAKV 82
           G  A+VTG +SG+G E  ++L   G  V  +  N AAG+ +      R   V+       
Sbjct: 6   GKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRH------ 59
Query: 83  DAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSK--DNIELQFATNXXX 140
                DVSS A      +    +   LN+L+NNAGI+    M +   ++       N   
Sbjct: 60  -----DVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTES 114
Query: 141 XXXXXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQ 200
                      MK+T       G I+N++S +      +               +  Y  
Sbjct: 115 VFIGCQQGIAAMKETG------GSIINMASVSSWLPIEQ---------------YAGYSA 153
Query: 201 SKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
           SK A     +  A   ++ G  I  NS+HP  I T + +
Sbjct: 154 SKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQ 192

>pdb|1YO6|A Chain A, Crystal Structure Of The Putative Carbonyl Reductase Sniffer Of Caenorhabditis Elegans Length = 250

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 98/229 (42%), Gaps = 32/229 (13%)
Query: 31  TAIVTGASSGIGTETARVLA----LRGVHVIMAVRNMAAGKDVREAI-VKEIPSAKVDAM 85
           + +VTGA+ GIG    + L     +R  H+I      A  +DV +A  +K I  ++V  +
Sbjct: 5   SVVVTGANRGIGLGLVQQLVKDKNIR--HII------ATARDVEKATELKSIKDSRVHVL 56
Query: 86  ELDVSSLASVRKFASEYN----SQGRPLNILINNAGIMASPFMLSKDN---IELQFATNX 138
            L V+   S+  F S+      S G  L++LINNAG++ S    ++ N   I  Q   N 
Sbjct: 57  PLTVTCDKSLDTFVSKVGEIVGSDG--LSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNT 114
Query: 139 XXXXXXXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDE---SAYNSF 195
                        +K  A K S +   V   S A     S G+    I D    SA    
Sbjct: 115 TSVVLLTQKLLPLLKNAASKESGDQLSV---SRAAVITISSGL--GSITDNTSGSAQFPV 169
Query: 196 GAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGIL 244
            AY  SK A  +  + LA  LK+D  N+   +  PG + TNL   N  L
Sbjct: 170 LAYRMSKAAINMFGRTLAVDLKDD--NVLVVNFCPGWVQTNLGGKNAAL 216

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 88/216 (40%), Gaps = 33/216 (15%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL- 87
           G  A+VTGAS GIG   A+ LA  G  V +   N    K+  E  V EI S    A  + 
Sbjct: 7   GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNR---KEEAEETVYEIQSNGGSAFSIG 63
Query: 88  -DVSSLASVRKFASEYNSQ------GRPLNILINNAGIMASPFMLSKDNIELQFATNXXX 140
            ++ SL  V    S  +++          +ILINNAGI    F+  ++  E  F      
Sbjct: 64  ANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFI--EETTEQFFDRXVSV 121
Query: 141 XXXXXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQ 200
                      +++   +     RI+N+SS A R +  +               F AY  
Sbjct: 122 NAKAPFF---IIQQALSRLRDNSRIINISSAATRISLPD---------------FIAYSX 163
Query: 201 SKLANILHAKELAKHLKEDGVNITANSLHPGSIVTN 236
           +K A       LAK L   G  IT N++ PG + T+
Sbjct: 164 TKGAINTXTFTLAKQLGARG--ITVNAILPGFVKTD 197

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 84/216 (38%), Gaps = 35/216 (16%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVD---AM 85
           G  A+VTGAS GIG   A +LA RG  VI        G    E+  + I     D    M
Sbjct: 12  GKVALVTGASRGIGKAIAELLAERGAKVI--------GTATSESGAQAISDYLGDNGKGM 63
Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQ--FATNXXXXXX 143
            L+V++  S+         +   ++IL+NNA I     ++     E      TN      
Sbjct: 64  ALNVTNPESIEAVLKAITDEFGGVDILVNNAAITRDNLLMRMKEEEWSDIMETNLTSIFR 123
Query: 144 XXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKL 203
                   M K      R+GRI+NV S               + +    N    Y  +K 
Sbjct: 124 LSKAVLRGMMK-----KRQGRIINVGS-----------VVGTMGNAGQAN----YAAAKA 163
Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
             I   K +A+ +   GV  T N++ PG I T++ +
Sbjct: 164 GVIGFTKSMAREVASRGV--TVNTVAPGFIETDMTK 197

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 88/209 (42%), Gaps = 23/209 (11%)
Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
           +G  A++TG+SSGIG   A   A  G H+++  R +    +   ++ KE    +V  + +
Sbjct: 6   SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSL-KEKFGVRVLEVAV 64
Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXXX 147
           DV++   V        S     +IL+NNAG  ++  ++   + + QF             
Sbjct: 65  DVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLA 124
Query: 148 XXDTMKKTAQKSSREGRIV-NVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI 206
                     ++   G I+ N S  A +  + E I                Y  +K A +
Sbjct: 125 RGLV---PGMRARGGGAIIHNASICAVQPLWYEPI----------------YNVTKAALM 165
Query: 207 LHAKELAKHLKEDGVNITANSLHPGSIVT 235
           + +K LA  + +D  NI  N ++PG I+T
Sbjct: 166 MFSKTLATEVIKD--NIRVNCINPGLILT 192

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 95/219 (43%), Gaps = 47/219 (21%)
Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
           +GL A+VTGA  GIG +T + L   G  V+   R      D+  ++ KE P   ++ + +
Sbjct: 6   SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRT---NSDL-VSLAKECPG--IEPVCV 59
Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAG-IMASPFM-LSKDNIELQFATNXXXXXXXX 145
           D+    +  K          P+++L+NNA  ++  PF+ ++K+  +  F+ N        
Sbjct: 60  DLGDWDATEKALGGIG----PVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLR------ 109
Query: 146 XXXXDTMKKTAQKSSRE-------GRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAY 198
                ++ + +Q  +R+       G IVNVSS      +   I                Y
Sbjct: 110 -----SVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLI---------------TY 149
Query: 199 GQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
             +K A  +  K +A  L    + +  NS++P  ++T++
Sbjct: 150 SSTKGAMTMLTKAMAMELGPHKIRV--NSVNPTVVLTDM 186

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
           +G  A+VTGAS GIG   AR L   G  V++  R++   + V   IV      + ++   
Sbjct: 28  SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA--GGEAESHAC 85
Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGI 118
           D+S   ++  FA+   +     ++L+NNAG+
Sbjct: 86  DLSHSDAIAAFATGVLAAHGRCDVLVNNAGV 116

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 88/209 (42%), Gaps = 23/209 (11%)
Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
           +G  A++TG+SSGIG   A   A  G H+++  R +    +   ++ KE    +V  + +
Sbjct: 6   SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSL-KEKFGVRVLEVAV 64
Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXXX 147
           DV++   V        S     +IL+NNAG  ++  ++   + + QF             
Sbjct: 65  DVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELHVMAAVRLA 124
Query: 148 XXDTMKKTAQKSSREGRIV-NVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI 206
                     ++   G I+ N S  A +  + E I                Y  +K A +
Sbjct: 125 RGLV---PGMRARGGGAIIHNASICAVQPLWYEPI----------------YNVTKAALM 165
Query: 207 LHAKELAKHLKEDGVNITANSLHPGSIVT 235
           + +K LA  + +D  NI  N ++PG I+T
Sbjct: 166 MFSKTLATEVIKD--NIRVNCINPGLILT 192

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 91/214 (42%), Gaps = 22/214 (10%)
Query: 33  IVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAMELDVS 90
           ++TG S GIG  +A + A +G  V +   N A+     + +V++I  A  +  A++ DV+
Sbjct: 29  LITGGSRGIGAASALLAARQGYAVAV---NYASNSAAADEVVRQIREAGGQALAVQADVA 85
Query: 91  SLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIE-LQFATNXXXXXXXXXXXX 149
               V       ++Q   L+ L+NNAG++     +    +E LQ                
Sbjct: 86  KEREVLAXFETVDAQLGRLSALVNNAGVVDQTTRVDGITLERLQRXFEINVFGSFLCARE 145
Query: 150 DTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHA 209
              + + +     G IVNVSS A R   S G   D    + A ++F              
Sbjct: 146 AVKRXSTRYGGSGGSIVNVSSAAARLG-SPGQYVDYAAAKGAIDTF-------------T 191
Query: 210 KELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI 243
             LAK +  +G+ +  N++ PG I T++    G+
Sbjct: 192 LGLAKEVATEGIRV--NAVRPGIIETDIHASGGL 223

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 84/216 (38%), Gaps = 35/216 (16%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVD---AM 85
           G  A+VTGAS GIG   A +LA RG  VI        G    E+  + I     D    M
Sbjct: 12  GKVALVTGASRGIGKAIAELLAERGAKVI--------GTATSESGAQAISDYLGDNGKGM 63
Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQ--FATNXXXXXX 143
            L+V++  S+         +   ++IL+NNA I     ++     E      TN      
Sbjct: 64  ALNVTNPESIEAVLKAITDEFGGVDILVNNADITRDNLLMRMKEEEWSDIMETNLTSIFR 123
Query: 144 XXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKL 203
                   M K      R+GRI+NV S               + +    N    Y  +K 
Sbjct: 124 LSKAVLRGMMK-----KRQGRIINVGS-----------VVGTMGNAGQAN----YAAAKA 163
Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
             I   K +A+ +   GV  T N++ PG I T++ +
Sbjct: 164 GVIGFTKSMAREVASRGV--TVNTVAPGFIETDMTK 197

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 84/229 (36%), Gaps = 49/229 (21%)
Query: 26  DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAM 85
           D +G  A++TGAS+GIG + A   A  G  V +A R+     D  + +  EI      A+
Sbjct: 29  DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARH----SDALQVVADEIAGVGGKAL 84
Query: 86  EL--DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFA--TNXXXX 141
            +  DV+    VR    +   +   ++I + NAGI++   ML     E Q    TN    
Sbjct: 85  PIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGV 144
Query: 142 XXXXXXXXDTMKKTA------QKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSF 195
                     M            +S  G I+N+  +   +  S+                
Sbjct: 145 FLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSK---------------- 188
Query: 196 GAYGQSKLANILH-----AKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
                   A ++H     A ELA H       I  NS+ PG I T L  
Sbjct: 189 --------AAVVHLTKAMAVELAPH------QIRVNSVSPGYIRTELVE 223

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Query: 26  DGTGLTAIVTGASSGIGTETARVLALRGVHVIMA-VRNMAAGKDVREAIVKEIPSAKVDA 84
           D  G TA VTG ++G+G    R L  +G  V +A +R  +  K +   +  E    +V  
Sbjct: 5   DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKAL-ATLEAEGSGPEVMG 63
Query: 85  MELDVSSLASVRKFASEYNSQGRPLNILINNAGI 118
           ++LDV+S    +  A E  ++  P++IL NNAG+
Sbjct: 64  VQLDVASREGFKMAADEVEARFGPVSILCNNAGV 97

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 82/209 (39%), Gaps = 31/209 (14%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G  AIV G + G G  T R L   G  V++  RN +    +RE         +V A+  D
Sbjct: 8   GKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRVHALRSD 62
Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIMA-SPF-MLSKDNIELQFATNXXXXXXXXX 146
           ++ L  +    +        +++L  NAG+    PF  +S+ + + QFA N         
Sbjct: 63  IADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFF--- 119
Query: 147 XXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI 206
               T+++        G IV  SS               + DE  +     Y  SK A +
Sbjct: 120 ----TVQRLTPLIREGGSIVFTSS---------------VADEGGHPGXSVYSASKAALV 160
Query: 207 LHAKELAKHLKEDGVNITANSLHPGSIVT 235
             A  LA  L   G+ +  NS+ PG I T
Sbjct: 161 SFASVLAAELLPRGIRV--NSVSPGFIDT 187

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 82/209 (39%), Gaps = 31/209 (14%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G  AIV G + G G  T R L   G  V++  RN +    +RE         +V A+  D
Sbjct: 7   GKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRVHALRSD 61
Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIMA-SPF-MLSKDNIELQFATNXXXXXXXXX 146
           ++ L  +    +        +++L  NAG+    PF  +S+ + + QFA N         
Sbjct: 62  IADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFF--- 118
Query: 147 XXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI 206
               T+++        G IV  SS               + DE  +     Y  SK A +
Sbjct: 119 ----TVQRLTPLIREGGSIVFTSS---------------VADEGGHPGXSVYSASKAALV 159
Query: 207 LHAKELAKHLKEDGVNITANSLHPGSIVT 235
             A  LA  L   G+ +  NS+ PG I T
Sbjct: 160 SFASVLAAELLPRGIRV--NSVSPGFIDT 186

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 91/221 (41%), Gaps = 48/221 (21%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMA-----------AGKDVREAIVKEIPSA 80
           AIVTGAS GIG   A  LA RG  VI      A           AG + R A++    + 
Sbjct: 31  AIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDAT 90
Query: 81  KVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFM--LSKDNIELQFATNX 138
            VDA+   V S  ++++F +        LN+L+NNAGI        +  D  +    TN 
Sbjct: 91  AVDAL---VES--TLKEFGA--------LNVLVNNAGITQDQLAMRMKDDEWDAVIDTNL 137
Query: 139 XXXXXXXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAY 198
                        M K     +R GRIVN++S     A + G    ++N          Y
Sbjct: 138 KAVFRLSRAVLRPMMK-----ARGGRIVNITSVVGS-AGNPG----QVN----------Y 177
Query: 199 GQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
             +K       + LA+ +   G  IT N + PG I T++ +
Sbjct: 178 AAAKAGVAGMTRALAREIGSRG--ITVNCVAPGFIDTDMTK 216

>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 33/211 (15%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G   +VTGA  GIG  T + L   G  V+   R  A   D+ +++V+E P   ++ + +D
Sbjct: 7   GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQA---DL-DSLVRECPG--IEPVCVD 60
Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGI-MASPFM-LSKDNIELQFATNXXXXXXXXX 146
           +    +  +      S G P+++L+NNA + +  PF+ ++K+  +  F  N         
Sbjct: 61  LGDWEATER---ALGSVG-PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVN----LRAVI 112
Query: 147 XXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI 206
                + +        G IVNVSS+  + A         + + S Y S    G   +   
Sbjct: 113 QVSQIVARGLIARGVPGAIVNVSSQCSQRA---------VTNHSVYCS--TKGALDMLTK 161
Query: 207 LHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
           + A EL  H       I  N+++P  ++T++
Sbjct: 162 VMALELGPH------KIRVNAVNPTVVMTSM 186

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 90/226 (39%), Gaps = 39/226 (17%)
Query: 17  TAEEVTQG----IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREA 72
           T E  TQG       TG  A+VTGA+ GIG   AR    +G  V +           RE 
Sbjct: 11  TLEAQTQGPGSMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGL--------HGTRED 62
Query: 73  IVKEIPS---AKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDN 129
            +KEI +     V     ++S   S+++ A     +   ++IL+NNAGI      +   +
Sbjct: 63  KLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQD 122
Query: 130 IELQ--FATNXXXXXXXXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIN 187
            +     A N             +M +      R GRI+N++S         G+    + 
Sbjct: 123 QDWDDVLAVNLTAASTLTRELIHSMMR-----RRYGRIINITSIV-------GV----VG 166
Query: 188 DESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSI 233
           +    N    Y  +K   I  +K LA+ +     NIT N + PG I
Sbjct: 167 NPGQTN----YCAAKAGLIGFSKALAQEIASR--NITVNCIAPGFI 206

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 89/220 (40%), Gaps = 43/220 (19%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G TA+VTG S GIG      LA  G  V    RN    K++ E +  EI   K   +E  
Sbjct: 21  GTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNE---KELDECL--EIWREKGLNVEGS 75
Query: 89  VSSLAS-------VRKFASEYNSQGRPLNILINNAGIM----ASPFMLSKDNIELQFATN 137
           V  L S       ++  A  ++ +   LNIL+NNAG++    A  F     NI +   TN
Sbjct: 76  VCDLLSRTERDKLMQTVAHVFDGK---LNILVNNAGVVIHKEAKDFTEKDYNIIM--GTN 130
Query: 138 XXXXXXXXXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGA 197
                         +     K+S+ G ++ +SS               I   SA  S   
Sbjct: 131 FEAAYHLSQIAYPLL-----KASQNGNVIFLSS---------------IAGFSALPSVSL 170
Query: 198 YGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
           Y  SK A     K LA    +D  NI  NS+ PG I+T L
Sbjct: 171 YSASKGAINQMTKSLACEWAKD--NIRVNSVAPGVILTPL 208

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 25  IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDA 84
            D  G  A+VTG S G+G   A+ LA  G  V++A RN+    +  + + ++    +  A
Sbjct: 17  FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMA 75
Query: 85  MELDVSSLASVRKFASEYNSQGRPLNILINNAGI 118
              DVS+   V+K       +   L+ ++N AGI
Sbjct: 76  FRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGI 109

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 89/211 (42%), Gaps = 25/211 (11%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVK-EIPSAKVDAMEL 87
           G TA+VTG S GIG      LA  G  V    RN    K++ + + +      KV+A   
Sbjct: 8   GCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQ---KELNDCLTQWRSKGFKVEASVC 64
Query: 88  DVSSLASVRKFASEY-NSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXX 146
           D+SS +  ++  +   N     LNIL+NNAGI+   +  +KD     ++           
Sbjct: 65  DLSSRSERQELMNTVANHFHGKLNILVNNAGIVI--YKEAKDYTVEDYSL-IMSINFEAA 121
Query: 147 XXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI 206
                +     K+S  G +V +SS +   A    + ++ +           YG +K A  
Sbjct: 122 YHLSVLAHPFLKASERGNVVFISSVSGALA----VPYEAV-----------YGATKGAMD 166
Query: 207 LHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
              + LA    +D  NI  N + PG I T+L
Sbjct: 167 QLTRCLAFEWAKD--NIRVNGVGPGVIATSL 195

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 90/217 (41%), Gaps = 32/217 (14%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDV-RE-AIVKEIPSAKVDAME 86
           G  A+VTG++SGIG   A  LA  G  V+  +      +D+ RE + ++     K   + 
Sbjct: 4   GKKAVVTGSTSGIGLAMATELAKAGADVV--INGFGQPEDIERERSTLESKFGVKAYYLN 61
Query: 87  LDVSSLASVRKFASEYNSQGRPLNILINNAGIM-ASPF-MLSKDNIELQFATNXXXXXXX 144
            D+S   + R F ++       L+IL+NNAGI   +P      D      A N       
Sbjct: 62  ADLSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFHG 121
Query: 145 XXXXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNS--FGAYGQSK 202
                  M+K        GRI+N++S AH    S         ++SAY +   G  G +K
Sbjct: 122 TAAALPIMQKQGW-----GRIINIAS-AHGLVASV--------NKSAYVAAKHGVVGLTK 167
Query: 203 LANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
           +            L+  G  IT N++ PG + T L  
Sbjct: 168 V----------TALENAGKGITCNAICPGWVRTPLVE 194

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 89/211 (42%), Gaps = 25/211 (11%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVK-EIPSAKVDAMEL 87
           G TA+VTG S GIG      LA  G  V    RN    K++ + + +      KV+A   
Sbjct: 9   GCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQ---KELNDCLTQWRSKGFKVEASVC 65
Query: 88  DVSSLASVRKFASEY-NSQGRPLNILINNAGIMASPFMLSKDNIELQFATNXXXXXXXXX 146
           D+SS +  ++  +   N     LNIL+NNAGI+   +  +KD     ++           
Sbjct: 66  DLSSRSERQELMNTVANHFHGKLNILVNNAGIVI--YKEAKDYTVEDYSL-IMSINFEAA 122
Query: 147 XXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI 206
                +     K+S  G +V +SS +   A    + ++ +           YG +K A  
Sbjct: 123 YHLSVLAHPFLKASERGNVVFISSVSGALA----VPYEAV-----------YGATKGAMD 167
Query: 207 LHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
              + LA    +D  NI  N + PG I T+L
Sbjct: 168 QLTRCLAFEWAKD--NIRVNGVGPGVIATSL 196

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 10/116 (8%)
Query: 8   GPSGFSASSTAEEVTQGIDGTGL----TAIVTGAS-SGIGTETARVLALRGVHVIMAVRN 62
           GP   + S   +E    IDG GL      +VT A+ +GIG+ TAR   L G  V+++  +
Sbjct: 1   GPGSMNLSEAPKE----IDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYH 56
Query: 63  MAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGI 118
                + R+ +  ++   +V+A+  DV+S  +V    ++   +   L++L+NNAG+
Sbjct: 57  ERRLGETRDQLA-DLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGL 111

>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 33/211 (15%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G   +VTGA  GIG  T + L   G  V+   R  A   D+ +++V+E P   ++ + +D
Sbjct: 7   GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQA---DL-DSLVRECPG--IEPVCVD 60
Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGI-MASPFM-LSKDNIELQFATNXXXXXXXXX 146
           +    +  +      S G P+++L+NNA + +  PF+ ++K+  +  F  N         
Sbjct: 61  LGDWEATER---ALGSVG-PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVN----LRAVI 112
Query: 147 XXXDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI 206
                + +        G IVNVSS+  + A         + + S Y S    G   +   
Sbjct: 113 QVSQIVARGLIARGVPGAIVNVSSQXSQRA---------VTNHSVYCS--TKGALDMLTK 161
Query: 207 LHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
           + A EL  H       I  N+++P  ++T++
Sbjct: 162 VMALELGPH------KIRVNAVNPTVVMTSM 186

>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235

Iteration: 1
 Score = 40.8 bits (94), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
            A++TGAS GIG   AR LA  G  + +  R++   + +   +++E    +V    LDVS
Sbjct: 4   VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQE-QGVEVFYHHLDVS 62
Query: 91  SLASVRKFASEYNSQGRPLNILINNAGI 118
              SV +F+ +   +   +++++ NAG+
Sbjct: 63  KAESVEEFSKKVLERFGDVDVVVANAGL 90

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	313
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	1e-135
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	8e-87
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	1e-66
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	2e-36
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	2e-36
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	2e-34
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	4e-34
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	4e-34
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	8e-34
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	1e-33
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	2e-33
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	3e-33
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	1e-32
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	3e-32
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	4e-32
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	7e-32
1spx_A	278	Short-chain reductase family member (5L265); paral	1e-31
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	1e-31
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	2e-31
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	2e-31
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	3e-31
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	3e-31
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	4e-31
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	4e-31
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	6e-31
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	8e-31
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	9e-31
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	2e-30
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	3e-30
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	4e-30
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	5e-30
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	6e-30
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	7e-30
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	7e-30
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	8e-30
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	9e-30
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	9e-30
1xkq_A	280	Short-chain reductase family member (5D234); parra	1e-29
1xhl_A	297	Short-chain dehydrogenase/reductase family member	2e-29
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	2e-29
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	2e-29
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	3e-29
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	3e-29
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	4e-29
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	4e-29
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	5e-29
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	7e-29
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	8e-29
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	1e-28
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	1e-28
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	1e-28
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	2e-28
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	2e-28
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	2e-28
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	2e-28
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	3e-28
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	3e-28
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	3e-28
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	4e-28
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	4e-28
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	6e-28
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	6e-28
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	7e-28
4dqx_A	277	Probable oxidoreductase protein; structural genomi	7e-28
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	7e-28
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	7e-28
1xq1_A	266	Putative tropinone reducatse; structural genomics,	8e-28
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	9e-28
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-27
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	1e-27
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	1e-27
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	1e-27
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	2e-27
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	2e-27
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	2e-27
4e4y_A	244	Short chain dehydrogenase family protein; structur	2e-27
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	4e-27
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	4e-27
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-27
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	4e-27
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	4e-27
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	4e-27
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	5e-27
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	6e-27
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	6e-27
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	8e-27
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	1e-26
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	1e-26
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	2e-26
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	2e-26
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	2e-26
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	3e-26
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-26
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	3e-26
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	3e-26
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	4e-26
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	4e-26
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	4e-26
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	4e-26
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	7e-26
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	1e-25
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	1e-25
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	1e-25
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	1e-25
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	3e-25
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	4e-25
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	8e-25
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	8e-25
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	8e-25
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	9e-25
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	1e-24
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	2e-24
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	2e-24
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	2e-24
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-24
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	2e-24
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	3e-24
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	4e-24
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	5e-24
3rih_A	293	Short chain dehydrogenase or reductase; structural	6e-24
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	8e-24
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	9e-24
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	1e-23
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	2e-23
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	2e-23
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	3e-23
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	3e-23
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	3e-23
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	5e-23
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	5e-23
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	7e-23
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	1e-22
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	1e-22
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	1e-22
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	1e-22
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	1e-22
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	1e-22
3imf_A	257	Short chain dehydrogenase; structural genomics, in	2e-22
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	2e-22
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	2e-22
3cxt_A	291	Dehydrogenase with different specificities; rossma	3e-22
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	3e-22
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	5e-22
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	5e-22
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	5e-22
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	7e-22
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	7e-22
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	2e-21
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	2e-21
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	2e-21
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	3e-21
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	3e-21
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	3e-21
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	4e-21
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	5e-21
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	5e-21
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	5e-21
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	7e-21
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	9e-21
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	1e-20
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	1e-20
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-20
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	2e-20
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	2e-20
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	3e-20
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	3e-20
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	3e-20
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	4e-20
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	4e-20
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	7e-20
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	9e-20
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	1e-19
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	1e-19
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	1e-19
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-13
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	2e-19
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	2e-19
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	3e-19
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	6e-19
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	1e-18
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	3e-18
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	3e-18
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	3e-18
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	5e-18
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	5e-18
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	8e-17
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	1e-16
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	8e-12
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	9e-07
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	2e-05
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	4e-04

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score =  383 bits (987), Expect = e-135
 Identities = 106/310 (34%), Positives = 149/310 (48%), Gaps = 31/310 (10%)

Query: 11  GFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVR 70
           G     TA ++         T ++TGA+SG+G  TAR LA RG  VIMAVR+   G+   
Sbjct: 1   GSMTGWTAADLP---SFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAA 57

Query: 71  EAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNI 130
             +     + +V+  ELD+  L+SVR+FA   +      ++LINNAGIMA P+ L+ D  
Sbjct: 58  RTM-----AGQVEVRELDLQDLSSVRRFADGVSG----ADVLINNAGIMAVPYALTVDGF 108

Query: 131 ELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDES 190
           E Q  TNHLGHF LT+LLL  +           R+V VSS AH       I  + +N  S
Sbjct: 109 ESQIGTNHLGHFALTNLLLPRLT---------DRVVTVSSMAHWPG---RINLEDLNWRS 156

Query: 191 -AYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGF 247
             Y+ + AY QSKLAN+L   EL + L   G  + A + HPG   TNL   +G  +    
Sbjct: 157 RRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDAL 216

Query: 248 CNTVGKLVLKNIPQGAATTCYVALHP----QVQGVSGEYFSDSNIYKPNSQGQNMELAKK 303
            +   ++V  +   GA  T Y A          G    Y   +     + + ++  +A  
Sbjct: 217 MSAATRVVATDADFGARQTLYAASQDLPGDSFVGPRFGYLGRTQPVGRSRRAKDAGMAAA 276

Query: 304 LWDFSMNLVK 313
           LW  S  L K
Sbjct: 277 LWALSEQLTK 286

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score =  260 bits (667), Expect = 8e-87
 Identities = 68/290 (23%), Positives = 110/290 (37%), Gaps = 54/290 (18%)

Query: 31  TAIVTGASSGIGTETARVLA-LRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDV 89
            A+VTG + GIG    R L  L    V++  R++  G+   + +  E         +LD+
Sbjct: 6   VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQLDI 63

Query: 90  SSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSK--DNIELQFATNHLGHFLLTHL 147
             L S+R        +   L++L+NNAGI       +      E+   TN  G   +   
Sbjct: 64  DDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTE 123

Query: 148 LLDTMKKTAQKSSREGRIVNVSSEAHRFAYS-------EGIRFDKINDE----------- 189
           LL  +K         GR+VNVSS     A         +  R + I +E           
Sbjct: 124 LLPLIKPQ-------GRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVE 176

Query: 190 --------SAYNSFGAYGQSKLANILHAKELAKHLKED--GVNITANSLHPGSIVTNLFR 239
                          AYG +K+   + ++  A+ L E   G  I  N+  PG + T++  
Sbjct: 177 DTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAG 236

Query: 240 YNGILRGFCNTVGKLVLKNIPQGAATTCYVA-LHPQVQGVSGEYFSDSNI 288
                            K+  +GA T  Y+A L P  +G  G++ S+  +
Sbjct: 237 PKAT-------------KSPEEGAETPVYLALLPPDAEGPHGQFVSEKRV 273

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score =  210 bits (536), Expect = 1e-66
 Identities = 61/322 (18%), Positives = 105/322 (32%), Gaps = 85/322 (26%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
               A+VTG + GIG E  + L+  G+ V++  R++  G +  E + K      V   +L
Sbjct: 11  KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKL-KNSNHENVVFHQL 69

Query: 88  DVSS-LASVRKFASEYNSQGRPLNILINNAGIMA-------------------------- 120
           DV+  +A++   A    +    L+IL+NNAG+                            
Sbjct: 70  DVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIY 129

Query: 121 ------SPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHR 174
                      + +  E     N+ G   +T +L+  ++ +        RIVNVSS    
Sbjct: 130 EKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDS-----PRIVNVSSSTGS 184

Query: 175 FA----------------------------YSEGIRFDKINDESAYNSFGAYGQSKLANI 206
                                           +  + + I      +   AY  SK    
Sbjct: 185 LKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLN 244

Query: 207 LHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGAATT 266
            + + LA  +         N + PG + T +    G                  +GA   
Sbjct: 245 AYTRVLANKIP----KFQVNCVCPGLVKTEMNYGIGN-------------YTAEEGAEHV 287

Query: 267 CYVALHPQVQGVSGEYFSDSNI 288
             +AL P   G SG ++  S +
Sbjct: 288 VRIALFPD-DGPSGFFYDCSEL 308

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score =  130 bits (328), Expect = 2e-36
 Identities = 60/228 (26%), Positives = 93/228 (40%), Gaps = 30/228 (13%)

Query: 31  TAIVTGASSGIGTETARVLALRG--VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           + +VTGA+ GIG    + L       H+I   R++    +     +K I  ++V  + L 
Sbjct: 5   SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE-----LKSIKDSRVHVLPLT 59

Query: 89  VSSLASVRKFASEYNSQ--GRPLNILINNAGIM---ASPFMLSKDNIELQFATNHLGHFL 143
           V+   S+  F S+         L++LINNAG++    +    ++  I  Q   N     L
Sbjct: 60  VTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVL 119

Query: 144 LTHLLLDTMKKTAQK------SSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGA 197
           LT  LL  +K  A K      S     ++ +SS       +           SA     A
Sbjct: 120 LTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTS--------GSAQFPVLA 171

Query: 198 YGQSKLA-NILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGIL 244
           Y  SK A N+   + LA  LK+D   +   +  PG + TNL   N  L
Sbjct: 172 YRMSKAAINMF-GRTLAVDLKDDN--VLVVNFCPGWVQTNLGGKNAAL 216

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  130 bits (329), Expect = 2e-36
 Identities = 59/216 (27%), Positives = 84/216 (38%), Gaps = 27/216 (12%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
           TG   ++TGA  GIG  TA   A     +++   N    ++           AKV    +
Sbjct: 30  TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVV 87

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIM-ASPFM-LSKDNIELQFATNHLGHFLLT 145
           D S+   +   A +  ++   ++IL+NNAG++  S         IE  F  N L HF  T
Sbjct: 88  DCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTT 147

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNS--FGAYGQSKL 203
              L  M K     +  G IV V+S A   +         +    AY S  F A G    
Sbjct: 148 KAFLPAMTK-----NNHGHIVTVASAAGHVS---------VPFLLAYCSSKFAAVG---F 190

Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
              L   ELA  L+  GV  T   L P  + T   +
Sbjct: 191 HKTLTD-ELA-ALQITGVKTTC--LCPNFVNTGFIK 222

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  124 bits (313), Expect = 2e-34
 Identities = 39/214 (18%), Positives = 70/214 (32%), Gaps = 30/214 (14%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
           +    IVTGA SG+G      L  RG  V M  R         +     +    V  +  
Sbjct: 2   SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRL----QQQELLLG-NAVIGIVA 56

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLGHFLLT 145
           D++    V    +     G    ++++ AG     P    + + I     +N +   L+ 
Sbjct: 57  DLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVA 116

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
              +  + +      R G + NV S A +   +               +   Y  SK   
Sbjct: 117 QQTVRLIGE------RGGVLANVLSSAAQVGKA---------------NESLYCASKWGM 155

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
               + L   LK+    +   +L+P  I +  + 
Sbjct: 156 RGFLESLRAELKDSP--LRLVNLYPSGIRSEFWD 187

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  124 bits (313), Expect = 4e-34
 Identities = 51/214 (23%), Positives = 89/214 (41%), Gaps = 34/214 (15%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKE-IPSAKVDAMELDV 89
            AI+TGAS GIG   A  LA  G  V++  R+    + V + I++      +   + LD+
Sbjct: 9   LAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDI 68

Query: 90  SSLASVRKFASEYNSQGRPLNILINNAGIM-ASPFMLSKDNIELQFATNHLGHFLLTHLL 148
           +          + + +   ++IL+N A +          DN       N +  + +   +
Sbjct: 69  TDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTV 128

Query: 149 LDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI-- 206
            + MK   QK+   G I NV+S A ++ +++G               G YG +K A +  
Sbjct: 129 TEIMKV--QKN---GYIFNVASRAAKYGFADG---------------GIYGSTKFALLGL 168

Query: 207 ---LHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
              L  +ELA         I   +L PG + T++
Sbjct: 169 AESL-YRELAPL------GIRVTTLCPGWVNTDM 195

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  124 bits (313), Expect = 4e-34
 Identities = 46/224 (20%), Positives = 85/224 (37%), Gaps = 34/224 (15%)

Query: 28  TGLTAIVTGASSGIGTETARVLA---LRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDA 84
                ++TGAS G G   A  LA     G  ++++ R+ +  + ++E +  + P  KV  
Sbjct: 5   GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVL 64

Query: 85  MELDVSSLASVRKFASEYNSQGRP----LNILINNAGIMASPFMLSKDNIELQ-----FA 135
              D+ + A V++  S      RP      +LINNA  +        +  +L      +A
Sbjct: 65  AAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWA 124

Query: 136 TNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSF 195
            N      LT   L+  + +         +VN+SS          ++         Y  +
Sbjct: 125 LNLTSMLCLTSGTLNAFQDSP---GLSKTVVNISSLC-------ALQ--------PYKGW 166

Query: 196 GAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
           G Y   K A  +  + LA     +  ++   S  PG +  ++ +
Sbjct: 167 GLYCAGKAARDMLYQVLAA----EEPSVRVLSYAPGPLDNDMQQ 206

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  123 bits (312), Expect = 8e-34
 Identities = 45/210 (21%), Positives = 84/210 (40%), Gaps = 25/210 (11%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
           +G  A++TG+SSGIG   A   A  G H+++  R +    +   ++ ++    +V  + +
Sbjct: 6   SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFG-VRVLEVAV 64

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIM-ASPFM-LSKDNIELQFATNHLGHFLLT 145
           DV++   V        S     +IL+NNAG       M  + +  +  +    +    L 
Sbjct: 65  DVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLA 124

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
             L+  M+         G I++ +S                           Y  +K A 
Sbjct: 125 RGLVPGMRA-----RGGGAIIHNASICAVQPLWYEP---------------IYNVTKAAL 164

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVT 235
           ++ +K LA  + +D   I  N ++PG I+T
Sbjct: 165 MMFSKTLATEVIKDN--IRVNCINPGLILT 192

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score =  123 bits (310), Expect = 1e-33
 Identities = 49/229 (21%), Positives = 84/229 (36%), Gaps = 33/229 (14%)

Query: 31  TAIVTGASSGIGTETARVLAL---RGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
           + ++TG + G+G    + L        H+    RN    K++ +        + +  +E+
Sbjct: 23  SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKN---HSNIHILEI 79

Query: 88  DVSSLASVRKFASEYNSQ--GRPLNILINNAGIM---ASPFMLSKDNIELQFATNHLGHF 142
           D+ +  +  K  ++       + LN+L NNAGI    A    +    +     TN +   
Sbjct: 80  DLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPI 139

Query: 143 LLTHLLLDTMKKTAQK------SSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFG 196
           +L    L  +KK A+             I+N+SS                   +      
Sbjct: 140 MLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQ------------GNTDGGMY 187

Query: 197 AYGQSKLA-NILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGIL 244
           AY  SK A N    K L+  L      I   SLHPG + T++   +  L
Sbjct: 188 AYRTSKSALNAA-TKSLSVDLYPQR--IMCVSLHPGWVKTDMGGSSAPL 233

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  122 bits (309), Expect = 2e-33
 Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 28/210 (13%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G TA+VTG+++GIG   A  L   G +V++  R      +  + I  + P A +  +  
Sbjct: 9   KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVA 68

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIM-ASPFM-LSKDNIELQFATNHLGHFLLT 145
           D+ +    +    +Y      ++ILINN GI     +  +  ++    F  N +    LT
Sbjct: 69  DLGTEQGCQDVIEKYPK----VDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLT 124

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
              L  M +      +EGR++ ++SEA        I     + E A      Y  +K   
Sbjct: 125 RSYLKKMIE-----RKEGRVIFIASEA-------AIM---PSQEMA-----HYSATKTMQ 164

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVT 235
           +  ++ LA+        +T N++ PGS +T
Sbjct: 165 LSLSRSLAELTTGTN--VTVNTIMPGSTLT 192

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  121 bits (307), Expect = 3e-33
 Identities = 44/212 (20%), Positives = 77/212 (36%), Gaps = 29/212 (13%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G  A+VT  SSG+G  +A  LA  G  +++  RN    +     I   +  A+VD +  
Sbjct: 6   QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAG 65

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIM-ASPFM-LSKDNIELQFATNHLGHFLLT 145
           D+     + +   +    G   +IL+ + G      FM L  ++ +  +         + 
Sbjct: 66  DIREPGDIDRLFEKARDLGGA-DILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVG 124

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSF--GAYGQSKL 203
               + M +        GR+V + S           +     D +  N       G  + 
Sbjct: 125 RRAAEQMVE-----KGWGRMVYIGSVTLL----RPWQ-----DLALSNIMRLPVIGVVRT 170

Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVT 235
                A ELA H       +T N++ P  I+T
Sbjct: 171 L----ALELAPH------GVTVNAVLPSLILT 192

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  119 bits (301), Expect = 1e-32
 Identities = 50/213 (23%), Positives = 84/213 (39%), Gaps = 34/213 (15%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA---KVDAMEL 87
            A++TGAS GIG   AR LA  G  + +  R+     D  E I  E+      +V    L
Sbjct: 4   VAVITGASRGIGEAIARALARDGYALALGARS----VDRLEKIAHELMQEQGVEVFYHHL 59

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLGHFLLT 145
           DVS   SV +F+ +   +   +++++ NAG+        LS++        N LG +   
Sbjct: 60  DVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTL 119

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
              LD++K+     +    +V  S  + R                     G Y  +K A 
Sbjct: 120 KAFLDSLKR-----TGGLALVTTSDVSAR----------------LIPYGGGYVSTKWA- 157

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNLF 238
              A  L +  + +  ++    L PG++ T   
Sbjct: 158 -ARA--LVRTFQIENPDVRFFELRPGAVDTYFG 187

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  119 bits (301), Expect = 3e-32
 Identities = 55/254 (21%), Positives = 82/254 (32%), Gaps = 52/254 (20%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
           +   A+VTG SSGIG  T  +L   G  V    R+    +    A+ +  P A++ A   
Sbjct: 7   SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVC 66

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGHFLLT 145
           DV     VR FA          +IL+NNAG    S F   + +    +            
Sbjct: 67  DVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPV 126

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSS------EAHRFAYSEGIRFDKINDESAYNSFGAYG 199
              L  ++        +  IV V+S      E H  A             SA        
Sbjct: 127 RAFLPQLES-----RADAAIVCVNSLLASQPEPHMVAT------------SA-------- 161

Query: 200 QSKLANILH-----AKELAKHLKEDGVNITANSLHPGSIVTNLFRY------NGILRGFC 248
            ++ A + +     A E A         +  N +  G + +  +R          L    
Sbjct: 162 -AR-AGVKNLVRSMAFEFAPK------GVRVNGILIGLVESGQWRRRFEAREERELDWAQ 213

Query: 249 NTVGKLVLKNIPQG 262
            T      K IP G
Sbjct: 214 WTAQLARNKQIPLG 227

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  120 bits (303), Expect = 4e-32
 Identities = 49/215 (22%), Positives = 86/215 (40%), Gaps = 20/215 (9%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G TA VTG ++G+G    R L  +G  V +A     +       +  E    +V  ++L
Sbjct: 7   AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQL 66

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFM--LSKDNIELQFATNHLGHFLLT 145
           DV+S    +  A E  ++  P++IL NNAG+     +   S D+ +     N  G     
Sbjct: 67  DVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGV 126

Query: 146 HLLLDTMKKTAQKSS-REGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
              +  M +  +    + G +VN +S A                  A  S G Y  +K A
Sbjct: 127 TTFVPRMVERVKAGEQKGGHVVNTASMA-------AFL--------AAGSPGIYNTTKFA 171

Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
               ++ L   L +  + ++   L PG + + ++ 
Sbjct: 172 VRGLSESLHYSLLKYEIGVSV--LCPGLVKSYIYA 204

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  119 bits (300), Expect = 7e-32
 Identities = 47/221 (21%), Positives = 88/221 (39%), Gaps = 25/221 (11%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G  A+VTG +SGIG  TA   A RG  ++++  +  A +     +  +        +  
Sbjct: 30  DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ--GFDAHGVVC 87

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFM--LSKDNIELQFATNHLGHFLLT 145
           DV  L  + + A E       ++++ +NAGI+ +  +  ++ D+       +  G     
Sbjct: 88  DVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAV 147

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
              L  +     +    G I   +S A       G+              G YG +K   
Sbjct: 148 EAFLPRLL----EQGTGGHIAFTASFA-------GL--------VPNAGLGTYGVAKYGV 188

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRG 246
           +  A+ LA+ +K +G+ ++   L P  + T L   +  +RG
Sbjct: 189 VGLAETLAREVKPNGIGVSV--LCPMVVETKLVSNSERIRG 227

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  118 bits (298), Expect = 1e-31
 Identities = 56/220 (25%), Positives = 90/220 (40%), Gaps = 31/220 (14%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKE-IPSAKVDAME 86
               AI+TG+S+GIG  TA + A  G  V +  R+    ++ R+ I+   +    V+++ 
Sbjct: 5   AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVV 64

Query: 87  LDVSSLASVRKFASEYNSQ-GRPLNILINNAGIMASP------FMLSKDNIELQFATNHL 139
            DV++ A   +  S    + G+ L+IL+NNAG              S ++ +     N  
Sbjct: 65  ADVTTDAGQDEILSTTLGKFGK-LDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLR 123

Query: 140 GHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYG 199
               LT   +  +  T       G IVN+SS A       G+         A   F  Y 
Sbjct: 124 SVIALTKKAVPHLSSTK------GEIVNISSIA------SGLH--------ATPDFPYYS 163

Query: 200 QSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
            +K A   + +  A  L + G  I  NS+ PG + T    
Sbjct: 164 IAKAAIDQYTRNTAIDLIQHG--IRVNSISPGLVATGFGS 201

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  117 bits (297), Expect = 1e-31
 Identities = 50/211 (23%), Positives = 81/211 (38%), Gaps = 28/211 (13%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
            A+VTG +SG+G E  ++L   G  V  +  N AAG    + +  E+   +   +  DVS
Sbjct: 8   VALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAG----QQLAAEL-GERSMFVRHDVS 62

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGI--MASPFMLSKDNIELQFATNHLGHFLLTHLL 148
           S A      +    +   LN+L+NNAGI           ++       N    F+     
Sbjct: 63  SEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQG 122

Query: 149 LDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILH 208
           +  MK+        G I+N++S +                      +  Y  SK A    
Sbjct: 123 IAAMKE------TGGSIINMASVS-------SWL--------PIEQYAGYSASKAAVSAL 161

Query: 209 AKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
            +  A   ++ G  I  NS+HP  I T + +
Sbjct: 162 TRAAALSCRKQGYAIRVNSIHPDGIYTPMMQ 192

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  116 bits (294), Expect = 2e-31
 Identities = 54/212 (25%), Positives = 76/212 (35%), Gaps = 26/212 (12%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEI-PSAKVDAMELDV 89
            AI+TG + GIG   A      G  V++  R+   G    E   K +    ++   + D 
Sbjct: 8   VAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVG----EKAAKSVGTPDQIQFFQHDS 63

Query: 90  SSLASVRKFASEYNSQGRPLNILINNAGI--MASPFMLSKDNIELQFATNHLGHFLLTHL 147
           S      K          P++ L+NNAGI    S    +        A N  G F  T L
Sbjct: 64  SDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRL 123

Query: 148 LLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANIL 207
            +  MK           I+N+SS         G             S GAY  SK A  +
Sbjct: 124 GIQRMKNKGLG----ASIINMSSIE-------GFV--------GDPSLGAYNASKGAVRI 164

Query: 208 HAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
            +K  A        ++  N++HPG I T L  
Sbjct: 165 MSKSAALDCALKDYDVRVNTVHPGYIKTPLVD 196

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  116 bits (294), Expect = 2e-31
 Identities = 60/215 (27%), Positives = 94/215 (43%), Gaps = 27/215 (12%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKE-IPSAKVDAME 86
            G   +VTGA+ GIG   AR  A  G  V++  R  A+  +V + I     P   + A+ 
Sbjct: 13  KGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALN 72

Query: 87  LDVSSLASVRKFASEYNSQ-GRPLNILINNAGIM--ASPFM-LSKDNIELQFATNHLGHF 142
           L+ ++    R+ A+    + GR L+ L++NA I+   +P   L  ++       N    F
Sbjct: 73  LENATAQQYRELAARVEHEFGR-LDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATF 131

Query: 143 LLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSK 202
           +LT  LL  +K+     S +  I   SS   R                A   +GAYG SK
Sbjct: 132 MLTRALLPLLKR-----SEDASIAFTSSSVGRKG-------------RAN--WGAYGVSK 171

Query: 203 LANILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
            A     + LA  L+     + ANS++PG+  T +
Sbjct: 172 FATEGLMQTLADELEGVT-AVRANSINPGATRTGM 205

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  116 bits (294), Expect = 3e-31
 Identities = 61/237 (25%), Positives = 87/237 (36%), Gaps = 31/237 (13%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G  AIV G + G+G  T R L   G  V++  RN +    +RE         +V A+  
Sbjct: 7   QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRVHALRS 61

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGHFLLT 145
           D++ L  +    +        +++L  NAG+    PF  +S+ + + QFA N  G F   
Sbjct: 62  DIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTV 121

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
             L   ++         G IV  SS               + DE  +     Y  SK A 
Sbjct: 122 QRLTPLIR-------EGGSIVFTSS---------------VADEGGHPGMSVYSASKAAL 159

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQG 262
           +  A  LA  L   G  I  NS+ PG I T      GI          L     P  
Sbjct: 160 VSFASVLAAELLPRG--IRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMK 214

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  116 bits (294), Expect = 3e-31
 Identities = 61/240 (25%), Positives = 97/240 (40%), Gaps = 31/240 (12%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G  A+VTGA+ GIG   A  L L+G  V +   N+ AG   + A+ ++    K   ++ 
Sbjct: 6   NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQC 65

Query: 88  DVSSLASVRK-FASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTH 146
           DV+    +R  F    +  GR L+IL+NNAG+       ++ N E     N +     T+
Sbjct: 66  DVADQQQLRDTFRKVVDHFGR-LDILVNNAGVN------NEKNWEKTLQINLVSVISGTY 118

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNS--FGAYGQSKLA 204
           L LD M K  Q     G I+N+SS A       G+    +  +  Y +   G  G ++ A
Sbjct: 119 LGLDYMSK--QNGGEGGIIINMSSLA-------GLM--PVAQQPVYCASKHGIVGFTRSA 167

Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR--YNGILRGFCNTVGKLVLKNIPQG 262
            +  A  L          +  N++ PG + T +          G        +   I   
Sbjct: 168 AL--AANLMNS------GVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYY 219

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  116 bits (292), Expect = 4e-31
 Identities = 43/216 (19%), Positives = 73/216 (33%), Gaps = 30/216 (13%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAM 85
              T  V GA   IG E A+  A  G  V    RN          +V EI +A  ++ A 
Sbjct: 6   RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKL----APLVAEIEAAGGRIVAR 61

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLGHFL 143
            LD  +   V  F +  ++   PL + I N G     P +  +       +       F+
Sbjct: 62  SLDARNEDEVTAFLNAADAHA-PLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFV 120

Query: 144 LTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKL 203
                   M         +G+I    + A        +R          + F A+  +K 
Sbjct: 121 SGRESARLMLA-----HGQGKIFFTGATA-------SLR--------GGSGFAAFASAKF 160

Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
                A+ +A+ L    +++ A+ +    + T   R
Sbjct: 161 GLRAVAQSMARELMPKNIHV-AHLIIDSGVDTAWVR 195

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  116 bits (292), Expect = 4e-31
 Identities = 34/214 (15%), Positives = 70/214 (32%), Gaps = 34/214 (15%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
               A+VTGA+ G+G E  + L+   +   +         +   A+ +      V+ +E 
Sbjct: 4   KKKIAVVTGATGGMGIEIVKDLSRDHIVYALGRN-----PEHLAALAEIE---GVEPIES 55

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLGHFLLT 145
           D+           +  +    ++ L++ A +   +     S          N +    L+
Sbjct: 56  DIVKEVLEEGGVDKLKNLDH-VDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELS 114

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
             LL  ++         G ++ ++S A    +                    Y  SK A 
Sbjct: 115 RQLLPALRA------ASGCVIYINSGAGNGPHPGN---------------TIYAASKHAL 153

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
              A    K    +G  I  +++ PG   T + +
Sbjct: 154 RGLADAFRKEEANNG--IRVSTVSPGPTNTPMLQ 185

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  116 bits (292), Expect = 6e-31
 Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 32/211 (15%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAMELD 88
             ++TGAS GIG   AR L + G  +++  R     +   EAI  EI  A     A  LD
Sbjct: 6   VILITGASGGIGEGIARELGVAGAKILLGARR----QARIEAIATEIRDAGGTALAQVLD 61

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIM-ASPFM-LSKDNIELQFATNHLGHFLLTH 146
           V+   SV  FA         +++L+NNAG+M  SP   +  D  E     N  G      
Sbjct: 62  VTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIG 121

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI 206
            +L  M+  AQ+S   G+I+N+ S                           Y  +K A  
Sbjct: 122 AVLPIME--AQRS---GQIINIGSIGALSVVPTA---------------AVYCATKFA-- 159

Query: 207 LHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
              + ++  L+++  NI    ++PG + + L
Sbjct: 160 --VRAISDGLRQESTNIRVTCVNPGVVESEL 188

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  116 bits (292), Expect = 8e-31
 Identities = 53/216 (24%), Positives = 80/216 (37%), Gaps = 28/216 (12%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G   IVTGAS GIG E A  LA  G HV++  R+    + V      E+ +A    +  
Sbjct: 27  QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHC-LELGAASAHYIAG 85

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLGHFLLT 145
            +  +    +F ++       L++LI N               ++      N L + +LT
Sbjct: 86  TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLT 145

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
              L  +K+        G IV VSS A + AY            +AY++      SK A 
Sbjct: 146 VAALPMLKQ------SNGSIVVVSSLAGKVAYPMV---------AAYSA------SKFA- 183

Query: 206 ILHA--KELAKHLKEDGVNITANSLHPGSIVTNLFR 239
            L      + K      VN++      G I T    
Sbjct: 184 -LDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAM 218

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  115 bits (290), Expect = 9e-31
 Identities = 57/234 (24%), Positives = 84/234 (35%), Gaps = 35/234 (14%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
           T I+TG + G+G E AR     G  V++A      G     A  +E+         LDV+
Sbjct: 7   TVIITGGARGLGAEAARQAVAAGARVVLADVLDEEG----AATARELG-DAARYQHLDVT 61

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGI--MASPFMLSKDNIELQFATNHLGHFLLTHLL 148
                ++  +    +   ++ L+NNAGI         S +        N  G F+    +
Sbjct: 62  IEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTV 121

Query: 149 LDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILH 208
           +  MK      +  G IVN+SS A       G+               +YG SK      
Sbjct: 122 IPAMKD-----AGGGSIVNISSAA-------GLM--------GLALTSSYGASKWGVRGL 161

Query: 209 AKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQG 262
           +K  A  L  D   I  NS+HPG   T +              G+    N P G
Sbjct: 162 SKLAAVELGTDR--IRVNSVHPGMTYTPM------TAETGIRQGEGNYPNTPMG 207

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  114 bits (288), Expect = 2e-30
 Identities = 54/237 (22%), Positives = 94/237 (39%), Gaps = 36/237 (15%)

Query: 8   GPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGK 67
           GP   S ++T +     +   G  A++TGA+ GIG + AR  A  G  ++++ R+++   
Sbjct: 1   GPG--SMTTTDDRYAGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELD 58

Query: 68  DVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGI-MASPFM-L 125
             R A+ ++     V  + +D++   +  + A         L++L+NNAGI    P +  
Sbjct: 59  AARRALGEQFG-TDVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDT 117

Query: 126 SKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDK 185
                +   A N     LL   +   M          G I+ V+S               
Sbjct: 118 DPQLFDATIAVNLRAPALLASAVGKAMVAA----GEGGAIITVAS--------------- 158

Query: 186 INDESAYNSFGAYGQSKLANILH-----AKELAKHLKEDGVNITANSLHPGSIVTNL 237
               +      AY  SK A ++      A+EL  H       I ANS+ P  ++T +
Sbjct: 159 AAALAPLPDHYAYCTSK-AGLVMATKVLARELGPH------GIRANSVCPTVVLTEM 208

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  114 bits (287), Expect = 3e-30
 Identities = 53/212 (25%), Positives = 82/212 (38%), Gaps = 29/212 (13%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEI-PSAKVDAMELDV 89
             +VTGAS GIG E A   A  G  VI+  RN    + V   I +E     +   ++L  
Sbjct: 14  IILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLT 73

Query: 90  SSLASVRKFASEYNSQ-GRPLNILINNAGIM--ASPF-MLSKDNIELQFATNHLGHFLLT 145
            +  + ++ A        R L+ +++NAG++    P    +    +     N    F+LT
Sbjct: 74  CTSENCQQLAQRIAVNYPR-LDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLT 132

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
             LL  + K     S  G +V  SS   R                A    GAY  SK A 
Sbjct: 133 QALLPLLLK-----SDAGSLVFTSSSVGRQG-------------RANW--GAYAASKFAT 172

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
               + LA   ++    +  N ++PG   T +
Sbjct: 173 EGMMQVLADEYQQ---RLRVNCINPGGTRTAM 201

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  113 bits (285), Expect = 4e-30
 Identities = 44/215 (20%), Positives = 85/215 (39%), Gaps = 33/215 (15%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           G   +VTG S GIG     VL          V  +A  +   + + ++    +   +  D
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDT--VVYGVARSEAPLKKLKEKYGD-RFFYVVGD 58

Query: 89  VSSLASVRKFASEYNSQ-GRPLNILINNAGIMA--SPFM-LSKDNIELQFATNHLGHFLL 144
           ++  + +++  +      G+ ++ L+ NAG++        +  +  +  +  N      L
Sbjct: 59  ITEDSVLKQLVNAAVKGHGK-IDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSL 117

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
             + L  +KK        G +V VSS+A                   ++S+GAYG SK A
Sbjct: 118 VGIALPELKK------TNGNVVFVSSDA-------CNM--------YFSSWGAYGSSK-A 155

Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
            + H    A  L  +   + A ++ PG + T++  
Sbjct: 156 ALNH---FAMTLANEERQVKAIAVAPGIVDTDMQV 187

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  112 bits (283), Expect = 5e-30
 Identities = 36/210 (17%), Positives = 73/210 (34%), Gaps = 33/210 (15%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
             ++TGASSG+G E A++    G    +  R+    +     +   + S  V     D++
Sbjct: 3   LIVITGASSGLGAELAKLYDAEGKATYLTGRS----ESKLSTVTNCL-SNNVGYRARDLA 57

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLGHFLLTHLL 148
           S   V +   + +S     + ++++AG            + I+     N      +   L
Sbjct: 58  SHQEVEQLFEQLDSI---PSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLREL 114

Query: 149 LDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILH 208
           +   K       +   +V + S A +   ++                  Y   K A    
Sbjct: 115 VKRYKD------QPVNVVMIMSTAAQQPKAQE---------------STYCAVKWAVKGL 153

Query: 209 AKELAKHLKEDGVNITANSLHPGSIVTNLF 238
            + +   LK   + I A  ++PG + T  +
Sbjct: 154 IESVRLELKGKPMKIIA--VYPGGMATEFW 181

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  113 bits (286), Expect = 6e-30
 Identities = 57/236 (24%), Positives = 87/236 (36%), Gaps = 34/236 (14%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
             +VTG   GIG    R     G  V++  ++ + G     A+ +E+P A    +  DV+
Sbjct: 11  VVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGG----RALEQELPGAV--FILCDVT 64

Query: 91  SLASVRKFASEYNSQ-GRPLNILINNAGIMASPFML---SKDNIELQFATNHLGHFLLTH 146
               V+   SE   + GR L+ ++NNAG    P      S          N LG + LT 
Sbjct: 65  QEDDVKTLVSETIRRFGR-LDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTK 123

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI 206
           L L  ++K+       G ++N+SS         G                 Y  +K A  
Sbjct: 124 LALPYLRKSQ------GNVINISSLV-------GAI--------GQAQAVPYVATKGAVT 162

Query: 207 LHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQG 262
              K LA      G  +  N + PG+I T L+     L        +  +   P G
Sbjct: 163 AMTKALALDESPYG--VRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLG 216

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  113 bits (285), Expect = 7e-30
 Identities = 60/242 (24%), Positives = 84/242 (34%), Gaps = 35/242 (14%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G TA+VTG S GIG      LA  G  V    RN     +  E   ++     V+    
Sbjct: 20  KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVC 77

Query: 88  DVSSLASVRKFASEYNSQ-GRPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGHFLL 144
           D+ S     K            LNIL+NNAG+ +       ++ +  +   TN    + L
Sbjct: 78  DLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHL 137

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
           + +    +K      S+ G ++ +SS               I   SA  S   Y  SK A
Sbjct: 138 SQIAYPLLKA-----SQNGNVIFLSS---------------IAGFSALPSVSLYSASKGA 177

Query: 205 NIL----HAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIP 260
                   A E AK       NI  NS+ PG I+T L                  +   P
Sbjct: 178 INQMTKSLACEWAKD------NIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTP 231

Query: 261 QG 262
            G
Sbjct: 232 MG 233

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  113 bits (285), Expect = 7e-30
 Identities = 55/266 (20%), Positives = 93/266 (34%), Gaps = 39/266 (14%)

Query: 8   GPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGK 67
            PS    SS   + ++ + G    A+ TGA  GIG   A  L  RG  V++   N  +  
Sbjct: 2   APSADITSSGPSDASKPLAGK--VALTTGAGRGIGRGIAIELGRRGASVVV---NYGSSS 56

Query: 68  DVREAIVKEIPSA--KVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMA-SPFM 124
              E +V E+     +  A++ D+S  + V     +  S    L+ +++N+G+      +
Sbjct: 57  KAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDEL 116

Query: 125 -LSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF 183
            ++++  +  F  N  G F +    L   +       R GRI+  SS A           
Sbjct: 117 EVTQELFDKVFNLNTRGQFFVAQQGLKHCR-------RGGRIILTSSIAAVMTGIPN--- 166

Query: 184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI 243
                         Y  SK A     +  A         +T N + PG + T++F  N  
Sbjct: 167 -----------HALYAGSKAAVEGFCRAFAVDCG--AKGVTVNCIAPGGVKTDMFDENSW 213

Query: 244 LRGFCNTVGKL-------VLKNIPQG 262
                   G         +    P  
Sbjct: 214 HYAPGGYKGMPQEKIDEGLANMNPLK 239

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  112 bits (284), Expect = 8e-30
 Identities = 48/209 (22%), Positives = 80/209 (38%), Gaps = 29/209 (13%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
            A+V+G + G+G    R +   G  V+        G    +A+  E+       + LDV+
Sbjct: 9   VALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEG----KAMAAELA-DAARYVHLDVT 63

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGI--MASPFMLSKDNIELQFATNHLGHFLLTHLL 148
             A  +       +    L++L+NNAGI  + +    +    +     N  G FL    +
Sbjct: 64  QPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAV 123

Query: 149 LDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILH 208
           +  MK+     +  G I+N+SS         G+            +   Y  +K A    
Sbjct: 124 VKPMKE-----AGRGSIINISSIE-------GLA--------GTVACHGYTATKFAVRGL 163

Query: 209 AKELAKHLKEDGVNITANSLHPGSIVTNL 237
            K  A  L   G  I  NS+HPG + T +
Sbjct: 164 TKSTALELGPSG--IRVNSIHPGLVKTPM 190

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  112 bits (282), Expect = 9e-30
 Identities = 53/210 (25%), Positives = 82/210 (39%), Gaps = 30/210 (14%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
             ++TGAS GIG  TAR+L  +G  V +  R+    +   +A+  E+  A    +  DV 
Sbjct: 7   AVLITGASRGIGEATARLLHAKGYRVGLMARD----EKRLQALAAELEGAL--PLPGDVR 60

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLGHFLLTHLL 148
                 +  +        L+ L+NNAG+    P   L+ +   L   TN  G FL     
Sbjct: 61  EEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHA 120

Query: 149 LDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILH 208
           +  +    +     G IVNV S A +  +  G                AY  SK   +  
Sbjct: 121 VPALL--RRGG---GTIVNVGSLAGKNPFKGG---------------AAYNASKFGLLGL 160

Query: 209 AKELAKHLKEDGVNITANSLHPGSIVTNLF 238
           A      L+E  V +   ++ PGS+ T   
Sbjct: 161 AGAAMLDLREANVRVV--NVLPGSVDTGFA 188

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  112 bits (283), Expect = 9e-30
 Identities = 59/222 (26%), Positives = 87/222 (39%), Gaps = 39/222 (17%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAM 85
            G  A+VTGAS GIG   A+ LA  G  V +   +    K+  E  V EI S      ++
Sbjct: 6   KGKVALVTGASRGIGRAIAKRLANDGALVAI---HYGNRKEEAEETVYEIQSNGGSAFSI 62

Query: 86  ELDVSSLASVRKFASE-------YNSQGRPLNILINNAGIMA-SPFM-LSKDNIELQFAT 136
             ++ SL  V    S             +  +ILINNAGI   +     ++   +   + 
Sbjct: 63  GANLESLHGVEALYSSLDNELQNRTGSTK-FDILINNAGIGPGAFIEETTEQFFDRMVSV 121

Query: 137 NHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFG 196
           N    F +    L  ++          RI+N+SS A R +                  F 
Sbjct: 122 NAKAPFFIIQQALSRLR-------DNSRIINISSAATRISLP---------------DFI 159

Query: 197 AYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLF 238
           AY  +K A       LAK L   G  IT N++ PG + T++ 
Sbjct: 160 AYSMTKGAINTMTFTLAKQLGARG--ITVNAILPGFVKTDMN 199

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  112 bits (283), Expect = 1e-29
 Identities = 53/225 (23%), Positives = 93/225 (41%), Gaps = 41/225 (18%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKE-IPSAKVDAME 86
           +  T I+TG+S+GIG  TA + A  G +V +  R+    ++ R+ I+K  +   +V+++ 
Sbjct: 5   SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVV 64

Query: 87  LDVSSLASVRKFASEYNSQ-GRPLNILINNAGI-MASPFMLSKDNIELQ-----FATNHL 139
            DV++     +  +    Q G+ +++L+NNAG  +   F  +  +  +         N  
Sbjct: 65  ADVTTEDGQDQIINSTLKQFGK-IDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQ 123

Query: 140 GHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYG 199
               +T  +   +  +       G IVNVSS         G +        A   F  Y 
Sbjct: 124 AVIEMTKKVKPHLVASK------GEIVNVSSIVA------GPQ--------AQPDFLYYA 163

Query: 200 QSKLANILH-----AKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
            +K A +       A +LAK        I  NS+ PG + T    
Sbjct: 164 IAK-AALDQYTRSTAIDLAKF------GIRVNSVSPGMVETGFTN 201

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  112 bits (283), Expect = 2e-29
 Identities = 57/244 (23%), Positives = 106/244 (43%), Gaps = 32/244 (13%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKE-IPSAKVDAME 86
           +G + I+TG+S+GIG   A + A  G  V +  RN    ++ ++ I+K  +P+ K++A+ 
Sbjct: 25  SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVV 84

Query: 87  LDVSSLASVRKFASEYNSQ-GRPLNILINNAGIMASPFML----SKDNIELQFATNHLGH 141
            DV+  +      +   ++ G+ ++IL+NNAG   +          +  +  F  N    
Sbjct: 85  ADVTEASGQDDIINTTLAKFGK-IDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAV 143

Query: 142 FLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQS 201
             +T    + + KT       G IVNVSS         G +        A++ +  Y  +
Sbjct: 144 IEMTQKTKEHLIKTK------GEIVNVSSIV------AGPQ--------AHSGYPYYACA 183

Query: 202 KLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLV---LKN 258
           K A   + +  A  L + G  +  NS+ PG++ T      G+     + +   +    + 
Sbjct: 184 KAALDQYTRCTAIDLIQHG--VRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKEC 241

Query: 259 IPQG 262
           IP G
Sbjct: 242 IPVG 245

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  111 bits (280), Expect = 2e-29
 Identities = 60/218 (27%), Positives = 88/218 (40%), Gaps = 43/218 (19%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAMELD 88
            A++TGASSGIG  TAR LA  G  V +A R      +   A+  E+ +A  KV  +ELD
Sbjct: 9   VALITGASSGIGEATARALAAEGAAVAIAARR----VEKLRALGDELTAAGAKVHVLELD 64

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIM-ASPFM-LSKDNIELQFATNHLGHFLLTH 146
           V+    V    +        L+IL+NNAGIM   P       +      TN LG   +T 
Sbjct: 65  VADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTR 124

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI 206
             L  + +       +G +V +SS A R                       Y  +K    
Sbjct: 125 AALPHLLR------SKGTVVQMSSIAGRVNVRNA---------------AVYQATKFG-- 161

Query: 207 LHA------KELAKHLKEDGVNITANSLHPGSIVTNLF 238
           ++A      +E+ +     GV +    + PG+  T L 
Sbjct: 162 VNAFSETLRQEVTER----GVRVV--VIEPGTTDTELR 193

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  111 bits (280), Expect = 2e-29
 Identities = 55/213 (25%), Positives = 79/213 (37%), Gaps = 27/213 (12%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
           T    I   A  GIG +T+R L  R +   + +  +     + E      P   +     
Sbjct: 4   TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELK-AINPKVNITFHTY 62

Query: 88  DVS-SLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTH 146
           DV+  +A  +K   +   Q + ++ILIN AGI+          IE   A N  G    T 
Sbjct: 63  DVTVPVAESKKLLKKIFDQLKTVDILINGAGIL------DDHQIERTIAINFTGLVNTTT 116

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI 206
            +LD   K  +K    G I N+ S         G          A +    Y  SK A +
Sbjct: 117 AILDFWDK--RKGGPGGIIANICSVT-------GFN--------AIHQVPVYSASKAAVV 159

Query: 207 LHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
                LAK     G  +TA S++PG   T L  
Sbjct: 160 SFTNSLAKLAPITG--VTAYSINPGITRTPLVH 190

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  111 bits (279), Expect = 3e-29
 Identities = 52/214 (24%), Positives = 82/214 (38%), Gaps = 34/214 (15%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G   I+T A+ GIG   A   A  G  VI    N +  +++ +          +    L
Sbjct: 5   DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYP-------GIQTRVL 57

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFML--SKDNIELQFATNHLGHFLLT 145
           DV+    + +FA+E     R L++L N AG +    +L   + + +     N    +L+ 
Sbjct: 58  DVTKKKQIDQFANEV---ER-LDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMI 113

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
              L  M    QKS   G I+N+SS A                    N    Y  +K A 
Sbjct: 114 KAFLPKMLA--QKS---GNIINMSSVASSVK-------------GVVNRC-VYSTTKAAV 154

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
           I   K +A    + G  I  N + PG++ T   +
Sbjct: 155 IGLTKSVAADFIQQG--IRCNCVCPGTVDTPSLQ 186

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  111 bits (279), Expect = 3e-29
 Identities = 56/219 (25%), Positives = 91/219 (41%), Gaps = 37/219 (16%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G  AI+TGA +GIG E A   A  G  V+++  N  A   V + I +     +  A   
Sbjct: 10  DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRC 67

Query: 88  DVSSLASVRKFASEYNSQ-GRPLNILINNAGI-MASPFMLSKDNIELQFATNHLGHFLLT 145
           D++S   +   A    S+ G+ ++IL+NNAG     PF +   +    +  N    F L+
Sbjct: 68  DITSEQELSALADFAISKLGK-VDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLS 126

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
            L+   M+K     +  G I+ ++S A                     +  +Y  SK A 
Sbjct: 127 QLVAPEMEK-----NGGGVILTITSMA-------AEN--------KNINMTSYASSK-AA 165

Query: 206 ILH-----AKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
             H     A +L +       NI  N + PG+I+T+  +
Sbjct: 166 ASHLVRNMAFDLGEK------NIRVNGIAPGAILTDALK 198

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  110 bits (278), Expect = 4e-29
 Identities = 48/217 (22%), Positives = 90/217 (41%), Gaps = 43/217 (19%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
           +GL A+VTGA  GIG +T + L   G  V+   R  +    + +          ++ + +
Sbjct: 6   SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC------PGIEPVCV 59

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLGHFLLT 145
           D+    +  K          P+++L+NNA ++   PF+ ++K+  +  F+ N    F ++
Sbjct: 60  DLGDWDATEKALGGIG----PVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVS 115

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
            ++   M    +     G IVNVSS               +     + +   Y  +K A 
Sbjct: 116 QMVARDMIN--RGVP--GSIVNVSS---------------MVAHVTFPNLITYSSTKGA- 155

Query: 206 ILH-----AKELAKHLKEDGVNITANSLHPGSIVTNL 237
           +       A EL  H       I  NS++P  ++T++
Sbjct: 156 MTMLTKAMAMELGPH------KIRVNSVNPTVVLTDM 186

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  111 bits (279), Expect = 4e-29
 Identities = 45/221 (20%), Positives = 85/221 (38%), Gaps = 40/221 (18%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
           T    +++G    +GT  AR  A +G  +++A R +   +DV + +       +  ++  
Sbjct: 10  TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT--GRRALSVGT 67

Query: 88  DVSSLASVRKFASEYNSQ-GRPLNILINNAGIM--ASPFM-LSKDNIELQFATNHLGHFL 143
           D++  A V     E     GR ++++INNA  +    PF   + +++         G   
Sbjct: 68  DITDDAQVAHLVDETMKAYGR-VDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALR 126

Query: 144 LTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKL 203
           L       +++       +G +VNV+S                    +   +GAY  +K 
Sbjct: 127 LIQGFTPALEE------SKGAVVNVNSMV-------VRH--------SQAKYGAYKMAK- 164

Query: 204 ANILH-----AKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
           + +L      A EL +        I  NS+ PG I     +
Sbjct: 165 SALLAMSQTLATELGEK------GIRVNSVLPGYIWGGTLK 199

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  111 bits (279), Expect = 5e-29
 Identities = 45/211 (21%), Positives = 76/211 (36%), Gaps = 31/211 (14%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
            A++TGA+SGIG   A+     G  V +  R         +A + EI       ++ D +
Sbjct: 31  IAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVL----DAAIAEIG-GGAVGIQADSA 85

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGHFLLTHLL 148
           +LA + +   +  ++   +++L  NAG     P   ++++  +  F  N  G        
Sbjct: 86  NLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKA 145

Query: 149 LDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILH 208
           L  +        R   +V   S                   +   +F  Y  SK A    
Sbjct: 146 LPLLA-------RGSSVVLTGS---------------TAGSTGTPAFSVYAASKAALRSF 183

Query: 209 AKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
           A+     LK+ G  I  N+L PG   T    
Sbjct: 184 ARNWILDLKDRG--IRINTLSPGPTETTGLV 212

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  110 bits (277), Expect = 7e-29
 Identities = 30/228 (13%), Positives = 62/228 (27%), Gaps = 39/228 (17%)

Query: 15  SSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIV 74
              +  +           +V G S  +G E  +    +  + I          D      
Sbjct: 8   HHHSSGLVPRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADH----- 62

Query: 75  KEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGI--MASPFM-LSKDNIE 131
                    +  +  S    ++    + NS+   ++  +  AG     +        +++
Sbjct: 63  ---------SFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVK 113

Query: 132 LQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESA 191
                N    F   H+    + +        G  V   + A        +          
Sbjct: 114 GMIDMNLYSAFASAHIGAKLLNQG-------GLFVLTGASA-------ALN--------R 151

Query: 192 YNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
            +   AYG +K A     K+LA          T+  + P ++ T   R
Sbjct: 152 TSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNR 199

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score =  108 bits (273), Expect = 8e-29
 Identities = 38/215 (17%), Positives = 77/215 (35%), Gaps = 41/215 (19%)

Query: 30  LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDV 89
           +  ++TGA+ G+G   AR  AL+G  ++++ R   A  ++   +          A+  D+
Sbjct: 1   MRVLITGATGGLGGAFAR--ALKGHDLLLSGRRAGALAELAREV-------GARALPADL 51

Query: 90  SSLASVRKFASEYNSQGRPLNILINNAGIM-ASPFM-LSKDNIELQFATNHLGHFLLTHL 147
           +     +    E    G  L++L++  G    +      +D +E   A +     L    
Sbjct: 52  ADELEAKALLEEA---GP-LDLLVHAVGKAGRASVREAGRDLVEEMLAAH----LLTAAF 103

Query: 148 LLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANIL 207
           +L   +       +  R V   +                        F AY  +K A   
Sbjct: 104 VLKHARF-----QKGARAVFFGAYP-------RYV--------QVPGFAAYAAAKGALEA 143

Query: 208 HAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG 242
           + +   K L  +GV++    +   ++ T L+   G
Sbjct: 144 YLEAARKELLREGVHLVL--VRLPAVATGLWAPLG 176

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  109 bits (276), Expect = 1e-28
 Identities = 56/215 (26%), Positives = 79/215 (36%), Gaps = 30/215 (13%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
            AIVTGASSG G   A     RG  V     +    ++            KV  +  DV+
Sbjct: 4   VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYA-DKVLRVRADVA 62

Query: 91  SLASVRKFASEYNSQ-GRPLNILINNAGIM----ASPFM-LSKDNIELQFATNHLGHFLL 144
               V    +    Q G  +++L+NNAGI     A        +  +   A N  G FL 
Sbjct: 63  DEGDVNAAIAATMEQFGA-IDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLG 121

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
              +L  M          G IVN++S A        +         A+    AY  SK A
Sbjct: 122 CRAVLPHMLL-----QGAGVIVNIASVA-------SLV--------AFPGRSAYTTSKGA 161

Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
            +   K +A      G  I  N++ PG I T + +
Sbjct: 162 VLQLTKSVAVDYAGSG--IRCNAVCPGMIETPMTQ 194

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  109 bits (275), Expect = 1e-28
 Identities = 44/217 (20%), Positives = 81/217 (37%), Gaps = 43/217 (19%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G   +VTGA  GIG  T + L   G  V+   R  A    +            ++ + +
Sbjct: 6   AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC------PGIEPVCV 59

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLGHFLLT 145
           D+    +  +          P+++L+NNA +    PF+ ++K+  +  F  N      ++
Sbjct: 60  DLGDWEATERALGSVG----PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVS 115

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
            ++   +          G IVNVSS                  + A  +   Y  +K A 
Sbjct: 116 QIVARGLI----ARGVPGAIVNVSS---------------QCSQRAVTNHSVYCSTKGA- 155

Query: 206 ILH-----AKELAKHLKEDGVNITANSLHPGSIVTNL 237
           +       A EL  H       I  N+++P  ++T++
Sbjct: 156 LDMLTKVMALELGPH------KIRVNAVNPTVVMTSM 186

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  109 bits (275), Expect = 1e-28
 Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 28/213 (13%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
            A++TGA SG G   A+  A  G  V++  R+ A      E +  EI      A+  D+S
Sbjct: 11  VALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGA----ERVAGEIG-DAALAVAADIS 65

Query: 91  SLASVRKFASEYNSQ-GRPLNILINNAGIMASP---FMLSKDNIELQFATNHLGHFLLTH 146
             A V        S+ G+ ++IL+NNAGI   P    ++  +  +     N  G +L+T 
Sbjct: 66  KEADVDAAVEAALSKFGK-VDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTS 124

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI 206
            L+   K+      +E  I+NV+S           R           +   Y  +K   +
Sbjct: 125 KLIPHFKE-NGAKGQECVILNVASTG-------AGR--------PRPNLAWYNATKGWVV 168

Query: 207 LHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
              K LA  L      I   +L+P +  T L  
Sbjct: 169 SVTKALAIELAPAK--IRVVALNPVAGETPLLT 199

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score =  109 bits (274), Expect = 2e-28
 Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 13/154 (8%)

Query: 30  LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDV 89
           +  +VTGA++G G    R    +G  VI   R     ++  + +  E+    +   +LDV
Sbjct: 1   MIVLVTGATAGFGECITRRFIQQGHKVIATGRR----QERLQELKDEL-GDNLYIAQLDV 55

Query: 90  SSLASVRKFASEYNSQGRPLNILINNAGIM--ASPFM-LSKDNIELQFATNHLGHFLLTH 146
            + A++ +  +   ++   ++IL+NNAG+     P    S ++ E    TN+ G   +T 
Sbjct: 56  RNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTR 115

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG 180
            +L  M +        G I+N+ S A  + Y+ G
Sbjct: 116 AVLPGMVE-----RNHGHIINIGSTAGSWPYAGG 144

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  109 bits (275), Expect = 2e-28
 Identities = 55/230 (23%), Positives = 92/230 (40%), Gaps = 31/230 (13%)

Query: 13  SASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREA 72
           S+    ++       +G  A+VTGAS GIG   AR L   G  V++  R++        A
Sbjct: 13  SSGHIDDDDKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKL----RA 68

Query: 73  IVKEIPSA--KVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIM--ASPFM-LSK 127
           + +EI +A  + ++   D+S   ++  FA+   +     ++L+NNAG+     P   +  
Sbjct: 69  VEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKP 128

Query: 128 DNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIN 187
              +   A N    +LL       M     K    G I+N+SS A       G       
Sbjct: 129 AEWDALIAVNLKAPYLLLRAFAPAMIA--AKR---GHIINISSLA-------GK---NPV 173

Query: 188 DESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
            + A     AY  SK          A+ L++    +  + + PGS+ T  
Sbjct: 174 ADGA-----AYTASKWGLNGLMTSAAEELRQH--QVRVSLVAPGSVRTEF 216

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  109 bits (275), Expect = 2e-28
 Identities = 61/215 (28%), Positives = 92/215 (42%), Gaps = 28/215 (13%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAMELD 88
             +VTG S GIG    R+ A +G  V +   N AA ++  +A+V  I  +  +  A+  D
Sbjct: 28  VVLVTGGSRGIGAAVCRLAARQGWRVGV---NYAANREAADAVVAAITESGGEAVAIPGD 84

Query: 89  VSSLASVRK-FASEYNSQGRPLNILINNAGIM--ASPFM-LSKDNIELQFATNHLGHFLL 144
           V + A +   F++     GR L+ L+NNAGI+        +S + IE     N  G  L 
Sbjct: 85  VGNAADIAAMFSAVDRQFGR-LDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILC 143

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
               +  M +    S + G IVNVSS A                  +   +  Y  SK A
Sbjct: 144 AAEAVRRMSR--LYSGQGGAIVNVSSMAAILG--------------SATQYVDYAASKAA 187

Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
                  LA+ +  +G  I  N++ PG I T+L  
Sbjct: 188 IDTFTIGLAREVAAEG--IRVNAVRPGIIETDLHA 220

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  109 bits (274), Expect = 2e-28
 Identities = 52/213 (24%), Positives = 86/213 (40%), Gaps = 27/213 (12%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
             ++TG  SG+G  TA  LA  G  + +   +    +  + A+++  P A+V     DVS
Sbjct: 15  VVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVS 74

Query: 91  SLASVRKFASEYNSQ-GRPLNILINNAGIM--ASPFM-LSKDNIELQFATNHLGHFLLTH 146
             A V  + +    + GR ++   NNAGI    +P    +    +   + N  G FL   
Sbjct: 75  DEAQVEAYVTATTERFGR-IDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLE 133

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI 206
            +L  M++  Q S   G +VN +S         GIR           +   Y  +K   +
Sbjct: 134 KVLKIMRE--QGS---GMVVNTASVG-------GIR--------GIGNQSGYAAAKHGVV 173

Query: 207 LHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
              +  A      G  I  N++ PG+I T +  
Sbjct: 174 GLTRNSAVEYGRYG--IRINAIAPGAIWTPMVE 204

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  109 bits (275), Expect = 3e-28
 Identities = 64/218 (29%), Positives = 91/218 (41%), Gaps = 31/218 (14%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
               A++TGA SGIG  TA  LA  GV V    R     ++V + IV      +  A+E 
Sbjct: 27  PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA--GGQAIALEA 84

Query: 88  DVSSLASVRKFASEYNSQ-GRPLNILINNAGIM--ASPFM-LSKDNIELQFATNHLGHFL 143
           DVS    +R    +   + G  L+I++ NAGI    +P   L     +   A N  G FL
Sbjct: 85  DVSDELQMRNAVRDLVLKFGH-LDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFL 143

Query: 144 LTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNS--FGAYGQS 201
             HL +  +K+  +     G IV VSS         G R       +AY +         
Sbjct: 144 TLHLTVPYLKQ--RGG---GAIVVVSSIN-------GTRTFTTPGATAYTATKAAQVAIV 191

Query: 202 KLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
           +      A EL KH      +I  N++ PG+I TN+  
Sbjct: 192 QQL----ALELGKH------HIRVNAVCPGAIETNISD 219

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  109 bits (274), Expect = 3e-28
 Identities = 51/243 (20%), Positives = 89/243 (36%), Gaps = 32/243 (13%)

Query: 5   SRKGPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMA 64
           ++        +       Q     G  A+VTGA  GIG E A  L  RG  VI+   N A
Sbjct: 5   TQPRGESKYDAIPGPLGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIV---NYA 61

Query: 65  AGKDVREAIVKEIPSAKVDAMEL--DVSSLASVRK-FASEYNSQGRPLNILINNAGIMA- 120
              +  E +V  I     DA  +  +V  +  + + F       G+ L+I+ +N+G+++ 
Sbjct: 62  NSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK-LDIVCSNSGVVSF 120

Query: 121 SPFM-LSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSE 179
                ++ +  +  F  N  G F +       ++         GR++ + S   +     
Sbjct: 121 GHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE-------IGGRLILMGSITGQAKAVP 173

Query: 180 GIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
                             Y  SK A    A+ +A  +      IT N + PG I T+++ 
Sbjct: 174 K--------------HAVYSGSKGAIETFARCMAIDMA--DKKITVNVVAPGGIKTDMYH 217

Query: 240 YNG 242
              
Sbjct: 218 AVC 220

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  108 bits (272), Expect = 3e-28
 Identities = 52/209 (24%), Positives = 85/209 (40%), Gaps = 29/209 (13%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
            A+VTGA  GIG   A  L   G  V +A  N A  K V   I +        A+++DVS
Sbjct: 4   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVS 61

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGHFLLTHLL 148
               V     +        ++++NNAG+  ++P   ++ + ++  +  N  G        
Sbjct: 62  DRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAA 121

Query: 149 LDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNS--FGAYGQSKLANI 206
           ++  KK  +     G+I+N  S+A      E          + Y+S  F   G ++ A  
Sbjct: 122 VEAFKK--EG--HGGKIINACSQAGHVGNPE---------LAVYSSSKFAVRGLTQTA-- 166

Query: 207 LHAKELAKHLKEDGVNITANSLHPGSIVT 235
             A++LA         IT N   PG + T
Sbjct: 167 --ARDLAPL------GITVNGYCPGIVKT 187

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  108 bits (273), Expect = 4e-28
 Identities = 49/212 (23%), Positives = 82/212 (38%), Gaps = 22/212 (10%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
            A+VTGAS GIG   AR L  +G+ V+   R +   +++            +     D+S
Sbjct: 34  LALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLS 93

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGIM-ASPFM-LSKDNIELQFATNHLGHFLLTHLL 148
           +   +    S   SQ   ++I INNAG+      +  S    +  F  N L   + T   
Sbjct: 94  NEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREA 153

Query: 149 LDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILH 208
             +MK+        G I+N++S +                    +    Y  +K A  + 
Sbjct: 154 YQSMKERNVDD---GHIININSMSGHRVL-------------PLSVTHFYSATKYA--VT 195

Query: 209 A--KELAKHLKEDGVNITANSLHPGSIVTNLF 238
           A  + L + L+E   +I A  + PG + T   
Sbjct: 196 ALTEGLRQELREAQTHIRATCISPGVVETQFA 227

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  108 bits (271), Expect = 4e-28
 Identities = 48/219 (21%), Positives = 86/219 (39%), Gaps = 37/219 (16%)

Query: 31  TAIVTGASSGIGTETARVLALRGVH-------VIMAVRNMAAGKDVREAIVKEIPSA--K 81
             ++TGA  GIG   A   A    H       ++++ R  A      E I  E  +    
Sbjct: 4   ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADL----EKISLECRAEGAL 59

Query: 82  VDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMA-SPFM-LSKDNIELQFATNHL 139
            D +  D+S +A VR+  +    +   ++ L+NNAG+        L++++ +    TN  
Sbjct: 60  TDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLK 119

Query: 140 GHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYG 199
           G F LT  L   M++  Q S   G I  ++S A   A+                    Y 
Sbjct: 120 GTFFLTQALFALMER--QHS---GHIFFITSVAATKAFRHS---------------SIYC 159

Query: 200 QSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLF 238
            SK       + +  + ++   N+    + PG++ T ++
Sbjct: 160 MSKFGQRGLVETMRLYARKC--NVRITDVQPGAVYTPMW 196

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  107 bits (271), Expect = 6e-28
 Identities = 50/244 (20%), Positives = 93/244 (38%), Gaps = 37/244 (15%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G +A++TG++ GIG   A      G  V +A  ++   +     I          A+++
Sbjct: 7   EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI-----GPAAYAVQM 61

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGHFLLT 145
           DV+   S+    +        L+IL+NNA +   +P + +++++ E  FA N  G     
Sbjct: 62  DVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTL 121

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNS--FGAYGQSKL 203
                 M        R G+I+N++S+A R   +           + Y +        ++ 
Sbjct: 122 QAAARQMI----AQGRGGKIINMASQAGRRGEA---------LVAIYCATKAAVISLTQS 168

Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVG-----KLVLKN 258
           A      +L KH       I  N++ PG +    +     L             +LV + 
Sbjct: 169 A----GLDLIKH------RINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEA 218

Query: 259 IPQG 262
           +P G
Sbjct: 219 VPFG 222

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  108 bits (272), Expect = 6e-28
 Identities = 53/214 (24%), Positives = 86/214 (40%), Gaps = 28/214 (13%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
              TA++TG++SGIG   AR LA  G ++++               V  + S  V     
Sbjct: 24  MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPA 83

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGHFLLT 145
           D++  + +    +    +    +IL+NNAG+           +  +   A N    F   
Sbjct: 84  DMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTI 143

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNS--FGAYGQSKL 203
              +  MKK        GRI+N++S AH    S          +SAY +   G  G +K 
Sbjct: 144 RGAIPPMKK-----KGWGRIINIAS-AHGLVASPF--------KSAYVAAKHGIMGLTKT 189

Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
                A E+A+        +T NS+ PG ++T L
Sbjct: 190 V----ALEVAES------GVTVNSICPGYVLTPL 213

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  107 bits (271), Expect = 7e-28
 Identities = 49/216 (22%), Positives = 80/216 (37%), Gaps = 29/216 (13%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
               A+VT ++ GIG   AR LA  G HV+++ R           +  E     V     
Sbjct: 13  ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE--GLSVTGTVC 70

Query: 88  DVSSLASVRKFASEYNSQ-GRPLNILINNAGI--MASPFM-LSKDNIELQFATNHLGHFL 143
            V       +  +   +  G  ++IL++NA +       +  +++  +     N     L
Sbjct: 71  HVGKAEDRERLVAMAVNLHGG-VDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVL 129

Query: 144 LTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKL 203
           +T  ++  M+K        G ++ VSS               +     + + G Y  SK 
Sbjct: 130 MTKAVVPEMEK-----RGGGSVLIVSS---------------VGAYHPFPNLGPYNVSKT 169

Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
           A +   K LA  L     NI  N L PG I TN  +
Sbjct: 170 ALLGLTKNLAVELAPR--NIRVNCLAPGLIKTNFSQ 203

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  108 bits (271), Expect = 7e-28
 Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 31/215 (14%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
                IVTG  SGIG  TA + A  G +V++A  N  A       +  EI  +K   + +
Sbjct: 26  NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAA----VRVANEIG-SKAFGVRV 80

Query: 88  DVSSLASVRKFASEYNSQ-GRPLNILINNAGI--MASPFMLSKDNIELQFATNHLGHFLL 144
           DVSS         +  ++ GR +++L+NNAG     +   + ++  +   + N  G FL 
Sbjct: 81  DVSSAKDAESMVEKTTAKWGR-VDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLC 139

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
           +  ++  M++     +  G I+N +S                    A     AY  SK A
Sbjct: 140 SKYVIPVMRR-----NGGGSIINTTSYT-------ATS--------AIADRTAYVASKGA 179

Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
                + +A    ++G  I  N++ PG+I +  F 
Sbjct: 180 ISSLTRAMAMDHAKEG--IRVNAVAPGTIDSPYFT 212

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  108 bits (271), Expect = 7e-28
 Identities = 41/156 (26%), Positives = 63/156 (40%), Gaps = 12/156 (7%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEI-PSAKVDAMEL 87
             T  +TGA+SG G   AR  A  G  +++  R     ++  +A+  E+    +V  + L
Sbjct: 21  SSTLFITGATSGFGEACARRFAEAGWSLVLTGRR----EERLQALAGELSAKTRVLPLTL 76

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIM--ASPFM-LSKDNIELQFATNHLGHFLL 144
           DV   A++         +   L  LINNAG+     P      D+ +    TN  G    
Sbjct: 77  DVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYS 136

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG 180
           T LLL  +            IVN+ S A ++ Y   
Sbjct: 137 TRLLLPRLI----AHGAGASIVNLGSVAGKWPYPGS 168

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  107 bits (270), Expect = 7e-28
 Identities = 55/218 (25%), Positives = 81/218 (37%), Gaps = 43/218 (19%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAM 85
               AIVTGA++GIG   A   A  G  V++            EA+   I  A  K   +
Sbjct: 11  NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGA----EAVAAAIRQAGGKAIGL 66

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGI-MASPFMLSKDNIELQFATNHLGHFLL 144
           E +V+              Q   + +L+NNAG     PF +   + E  F  N    F L
Sbjct: 67  ECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRL 126

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFG--AYGQSK 202
           + L    M+K     +  G I+N+SS A                     +    +YG SK
Sbjct: 127 SQLAAPHMQK-----AGGGAILNISSMA-----------------GENTNVRMASYGSSK 164

Query: 203 LANILH-----AKELAKHLKEDGVNITANSLHPGSIVT 235
            A + H     A ++          I  N++ PG+I T
Sbjct: 165 -AAVNHLTRNIAFDVGPM------GIRVNAIAPGAIKT 195

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  107 bits (271), Expect = 8e-28
 Identities = 51/213 (23%), Positives = 76/213 (35%), Gaps = 27/213 (12%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
              T +VTG + GIG       A  G  +    RN     +      K+    +V     
Sbjct: 13  KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGSVC 70

Query: 88  DVSSLASVRKFASEYNSQ-GRPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGHFLL 144
           D S      K     +S  G  L+ILINN G   + P +  + ++     +TN    + L
Sbjct: 71  DASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHL 130

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
           + L    +K      S  G I+ +SS               I    + +    Y  +K A
Sbjct: 131 SQLAHPLLKA-----SGCGNIIFMSS---------------IAGVVSASVGSIYSATKGA 170

Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
               A+ LA     D   I AN++ P  I T L
Sbjct: 171 LNQLARNLACEWASD--GIRANAVAPAVIATPL 201

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  107 bits (269), Expect = 9e-28
 Identities = 43/215 (20%), Positives = 80/215 (37%), Gaps = 28/215 (13%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAM 85
            G   ++TG+S GIG  TAR+ A  G  V +  R   A     +  +  + +        
Sbjct: 6   KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPAN---IDETIASMRADGGDAAFF 62

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGIMA--SPFM-LSKDNIELQFATNHLGHF 142
             D+++  + ++   E+ ++   +++LINNAG +    P   +     +     N     
Sbjct: 63  AADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVV 122

Query: 143 LLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFG--AYGQ 200
           + T   L  +   A+ S +   +++  S A       G               G   YG 
Sbjct: 123 MTTKFALPHLAAAAKASGQTSAVISTGSIA-------GHT---------GGGPGAGLYGA 166

Query: 201 SKLANILHAKELAKHLKEDGVNITANSLHPGSIVT 235
           +K       K       +DG  +  N + PG++ T
Sbjct: 167 AKAFLHNVHKNWVDFHTKDG--VRFNIVSPGTVDT 199

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  107 bits (270), Expect = 1e-27
 Identities = 62/226 (27%), Positives = 92/226 (40%), Gaps = 31/226 (13%)

Query: 17  TAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKE 76
           T     Q +  T   AIVTGAS GIG   A  LA  G  V++   N A      E +  +
Sbjct: 15  TENLYFQSMMETNKVAIVTGASRGIGAAIAARLASDGFTVVI---NYAGKAAAAEEVAGK 71

Query: 77  IPSA--KVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMA-SPFM-LSKDNIEL 132
           I +A  K    + DVS  A+VR+  +        +++L+NNAGIM  +          + 
Sbjct: 72  IEAAGGKALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDR 131

Query: 133 QFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAY 192
             A N  G F         ++         GRI+N+S+      +               
Sbjct: 132 VIAVNLKGTFNTLREAAQRLR-------VGGRIINMSTSQVGLLHP-------------- 170

Query: 193 NSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLF 238
            S+G Y  +K         L+K L+  G +IT N++ PG   T+LF
Sbjct: 171 -SYGIYAAAKAGVEAMTHVLSKELR--GRDITVNAVAPGPTATDLF 213

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  107 bits (269), Expect = 1e-27
 Identities = 68/252 (26%), Positives = 102/252 (40%), Gaps = 40/252 (15%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMA-VRNMAAGKDVREAIVKEIPSAKVDAME 86
            G  A+VTG++SGIG   A  LA +G  +++    + A  + VR  +  +    KV    
Sbjct: 3   KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH-GVKVLYDG 61

Query: 87  LDVSSLASVRKFASEYNSQGRPLNILINNAGIM-ASPFM-LSKDNIELQFATNHLGHFLL 144
            D+S   +VR        Q   ++IL+NNAGI   +       +  +   A N    F  
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHG 121

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNS--FGAYGQSK 202
           T   L  MKK        GRI+N++S AH    S          +SAY +   G  G +K
Sbjct: 122 TAAALPHMKK-----QGFGRIINIAS-AHGLVASAN--------KSAYVAAKHGVVGFTK 167

Query: 203 LANILHAKELAKHLKEDGVNITANSLHPGSIVTNL--------FRYNGILRGFCNTVGKL 254
           +     A E A         ITAN++ PG + T L           NG+ +       +L
Sbjct: 168 VT----ALETAGQ------GITANAICPGWVRTPLVEKQISALAEKNGVDQE--TAAREL 215

Query: 255 VLKNIPQGAATT 266
           + +  P     T
Sbjct: 216 LSEKQPSLQFVT 227

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  107 bits (269), Expect = 1e-27
 Identities = 59/215 (27%), Positives = 88/215 (40%), Gaps = 33/215 (15%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAMELD 88
             IVTGA SGIG   A+  AL    V+               IV+E+     +V  ++ D
Sbjct: 9   VVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRL----NQIVQELRGMGKEVLGVKAD 64

Query: 89  VSSLASVRKFASEYNSQ-GRPLNILINNAGIM--ASPFM-LSKDNIELQFATNHLGHFLL 144
           VS    V +F         R +++L NNAGIM   +P   +S +  E   A N    F  
Sbjct: 65  VSKKKDVEEFVRRTFETYSR-IDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYS 123

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
           +  ++  M K       +G IVN +S A       GIR           +   Y  +K  
Sbjct: 124 SRAVIPIMLK-----QGKGVIVNTASIA-------GIR--------GGFAGAPYTVAKHG 163

Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
            I   + +A H  + G  I A ++ PG++ TN+  
Sbjct: 164 LIGLTRSIAAHYGDQG--IRAVAVLPGTVKTNIGL 196

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  107 bits (270), Expect = 1e-27
 Identities = 53/246 (21%), Positives = 88/246 (35%), Gaps = 38/246 (15%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G  A+VTG+  GIG   A  L   G  V++   N A      E +V EI +   DA+ +
Sbjct: 17  DGKVALVTGSGRGIGAAVAVHLGRLGAKVVV---NYANSTKDAEKVVSEIKALGSDAIAI 73

Query: 88  --DVSSLASVRK-FASEYNSQGRPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLGHF 142
             D+  +  + K F       G  L+I ++N+G+++      ++++  +  F+ N  G F
Sbjct: 74  KADIRQVPEIVKLFDQAVAHFGH-LDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQF 132

Query: 143 LLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSK 202
            +       +          GRIV  SS   +                       Y  SK
Sbjct: 133 FVAREAYRHLT-------EGGRIVLTSSNTSKDFSVPK--------------HSLYSGSK 171

Query: 203 LANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNT------VGKLVL 256
            A     +  +K        IT N++ PG  VT++F           T        ++  
Sbjct: 172 GAVDSFVRIFSKDCG--DKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAA 229

Query: 257 KNIPQG 262
              P  
Sbjct: 230 HASPLH 235

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  106 bits (268), Expect = 2e-27
 Identities = 59/219 (26%), Positives = 85/219 (38%), Gaps = 39/219 (17%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G TA+VTG S GIG      LA  G  V    RN     D       +    KV+A   
Sbjct: 8   EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVC 65

Query: 88  DVSSLASVRKFASEYNSQGR-PLNILINNAGI-MASPFM-LSKDNIELQFATNHLGHFLL 144
           D+SS +  ++  +   +     LNIL+NNAGI +       + ++  L  + N    + L
Sbjct: 66  DLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHL 125

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
           + L    +K      S  G +V +SS               ++   A      YG +K A
Sbjct: 126 SVLAHPFLKA-----SERGNVVFISS---------------VSGALAVPYEAVYGATKGA 165

Query: 205 ------NILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
                  +  A E AK       NI  N + PG I T+L
Sbjct: 166 MDQLTRCL--AFEWAKD------NIRVNGVGPGVIATSL 196

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  107 bits (269), Expect = 2e-27
 Identities = 45/171 (26%), Positives = 82/171 (47%), Gaps = 13/171 (7%)

Query: 16  STAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRG---VHVIMAVRNMAAGKDVREA 72
           S   +  + +     T ++TGAS+GIG  TA          + +I+A R +   +++++ 
Sbjct: 22  SQGRKAAERLAKK--TVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKT 79

Query: 73  IVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIM--ASPFM-LSKDN 129
           I +E P+AKV   +LD++    ++ F      + + ++IL+NNAG    +     ++ ++
Sbjct: 80  IDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATED 139

Query: 130 IELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG 180
           I+  F TN      +T  +L   +         G IVN+ S A R AY  G
Sbjct: 140 IQDVFDTNVTALINITQAVLPIFQA-----KNSGDIVNLGSIAGRDAYPTG 185

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  106 bits (268), Expect = 2e-27
 Identities = 46/222 (20%), Positives = 75/222 (33%), Gaps = 38/222 (17%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA-KVDAME 86
              T +VTG  SGIG   A  L   G  V++  RN        + +     +   +    
Sbjct: 10  QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEP 69

Query: 87  LDVSSLASVRKFASEYNSQ-GRPLNILINNAGIM--ASPFM-LSKDNIELQFATNHLGHF 142
            D+++     +      +  GR L+ +++ AG      P   +  +        N  G  
Sbjct: 70  TDITNEDETARAVDAVTAWHGR-LHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTM 128

Query: 143 LLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSK 202
            +       M +        G  V +SS               I   + +  FGAYG +K
Sbjct: 129 YVLKHAAREMVR-----GGGGSFVGISS---------------IAASNTHRWFGAYGVTK 168

Query: 203 LANILH-----AKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
            + + H     A EL          +  NS+ PG I T+L  
Sbjct: 169 -SAVDHLMQLAADELGAS------WVRVNSIRPGLIRTDLVA 203

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  106 bits (266), Expect = 2e-27
 Identities = 38/214 (17%), Positives = 68/214 (31%), Gaps = 39/214 (18%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
                +VTG S GIG     +L     H ++ +    +                +  ++ 
Sbjct: 3   AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA-----------ENLKFIKA 51

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIM-ASPFM-LSKDNIELQFATNHLGHFLLT 145
           D++    +              + +  NAGI+       +  ++I+     N        
Sbjct: 52  DLTKQQDITNVLDI-IKNVS-FDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFI 109

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
             L + +K           IV   S+                   A  +  AY  SK A 
Sbjct: 110 KGLENNLKV-------GASIVFNGSDQ-------CFI--------AKPNSFAYTLSKGAI 147

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
               K LA  L +    I  N++ PG++ T+L+R
Sbjct: 148 AQMTKSLALDLAKYQ--IRVNTVCPGTVDTDLYR 179

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  106 bits (267), Expect = 4e-27
 Identities = 44/216 (20%), Positives = 80/216 (37%), Gaps = 30/216 (13%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAI---VKEIPSA--KV 82
            G T  ++G S GIG   A+ +A  G +V +  ++      +   I    KEI  A  + 
Sbjct: 8   RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQA 67

Query: 83  DAMELDVSSLASVRKFASEYNSQ-GRPLNILINNAGIMA-SPFM-LSKDNIELQFATNHL 139
             +  D+    +V    ++   Q G  ++I +NNA  +       +     +L       
Sbjct: 68  LPIVGDIRDGDAVAAAVAKTVEQFGG-IDICVNNASAINLGSIEEVPLKRFDLMNGIQVR 126

Query: 140 GHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYG 199
           G + ++   +  MK           I+ +S                I  E  +     Y 
Sbjct: 127 GTYAVSQSCIPHMKG-----RDNPHILTLSP--------------PIRLEPKWLRPTPYM 167

Query: 200 QSKLANILHAKELAKHLKEDGVNITANSLHPGSIVT 235
            +K    L A  +A+ L++ G  I +N+L P + V 
Sbjct: 168 MAKYGMTLCALGIAEELRDAG--IASNTLWPRTTVA 201

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score =  106 bits (266), Expect = 4e-27
 Identities = 49/234 (20%), Positives = 91/234 (38%), Gaps = 46/234 (19%)

Query: 13  SASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREA 72
           ++ +  +++ +G        ++TGASSGIG   AR  +  G  +++  R        R  
Sbjct: 2   ASMTGGQQMGRGSMKK--LVVITGASSGIGEAIARRFSEEGHPLLLLAR--------RVE 51

Query: 73  IVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMA-SPFM-LSKDNI 130
            +K +        ++DV+   +     +       P + ++NNAG+M          +  
Sbjct: 52  RLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEW 111

Query: 131 ELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDES 190
           +  F  N LG       +L  MK  A+     G I+N+SS A +  + +           
Sbjct: 112 QRMFDVNVLGLLNGMQAVLAPMK--ARNC---GTIINISSIAGKKTFPDH---------- 156

Query: 191 AYNSFGAYGQSKLANILHA------KELAKHLKEDGVNITANSLHPGSIVTNLF 238
                 AY  +K A  +HA      +E+A       V +   ++ P ++ T L 
Sbjct: 157 -----AAYCGTKFA--VHAISENVREEVAAS----NVRVM--TIAPSAVKTELL 197

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  106 bits (266), Expect = 4e-27
 Identities = 58/219 (26%), Positives = 84/219 (38%), Gaps = 30/219 (13%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAM 85
            G TA VTG S GIG   A+ LAL G  V  A+       +  +A+V EI  A  +  A+
Sbjct: 30  AGKTAFVTGGSRGIGAAIAKRLALEGAAV--AL-TYVNAAERAQAVVSEIEQAGGRAVAI 86

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLGHFL 143
             D     ++ +   E       L+IL+N+AGI   +P    +  + +   A N    F+
Sbjct: 87  RADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFV 146

Query: 144 LTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKL 203
                   +          GRI+ + S         G                 Y  SK 
Sbjct: 147 AIRSASRHLG-------DGGRIITIGSNLAELVPWPG--------------ISLYSASKA 185

Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG 242
           A     K LA+ L      IT N +HPGS  T++   +G
Sbjct: 186 ALAGLTKGLARDLG--PRGITVNIVHPGSTDTDMNPADG 222

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  106 bits (266), Expect = 4e-27
 Identities = 52/216 (24%), Positives = 72/216 (33%), Gaps = 34/216 (15%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
            AIVTGASSGIG   A + A  G  V++  RN  A  ++ + I       +  A+  DV 
Sbjct: 10  IAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG--GGEAAALAGDVG 67

Query: 91  SLASVRKF----ASEYNSQGRPLNILINNAGIMASPFML---SKDNIELQFATNHLGHFL 143
             A            +   G  L+   NNAG + +   +   S +       TN    FL
Sbjct: 68  DEALHEALVELAVRRF---GG-LDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFL 123

Query: 144 LTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKL 203
                +  +          G +   SS     A               +     Y  SK 
Sbjct: 124 AAKYQVPAIAA-----LGGGSLTFTSSFVGHTA--------------GFAGVAPYAASKA 164

Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
             I   + LA  L   G  I  N+L PG   T    
Sbjct: 165 GLIGLVQALAVELGARG--IRVNALLPGGTDTPANF 198

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  106 bits (266), Expect = 4e-27
 Identities = 45/220 (20%), Positives = 77/220 (35%), Gaps = 38/220 (17%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
           TG  A++TG +SG+G          G  V +  ++    +++  A            +  
Sbjct: 4   TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH-----GGNAVGVVG 58

Query: 88  DVSSLASVRKFASEYNSQ-GRPLNILINNAGIMASP---FMLSKDNIELQF----ATNHL 139
           DV SL   ++ A    +  G+ ++ LI NAGI         L +D I+  F      N  
Sbjct: 59  DVRSLQDQKRAAERCLAAFGK-IDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVK 117

Query: 140 GHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYG 199
           G+       L  +          G +V   S A       G                 Y 
Sbjct: 118 GYIHAVKACLPALVS------SRGSVVFTISNA-------GFY--------PNGGGPLYT 156

Query: 200 QSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
            +K A +   +++A  L     ++  N + PG + T+L  
Sbjct: 157 ATKHAVVGLVRQMAFELAP---HVRVNGVAPGGMNTDLRG 193

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  107 bits (269), Expect = 4e-27
 Identities = 44/215 (20%), Positives = 82/215 (38%), Gaps = 28/215 (13%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAI---VKEIPSA--KV 82
            G T  +TGAS GIG   A   A  G ++++A +       +   I    +EI +   K 
Sbjct: 44  AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKA 103

Query: 83  DAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLG 140
               +DV     +     +   +   ++IL+NNA  ++ +  +      ++L    N  G
Sbjct: 104 LPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRG 163

Query: 141 HFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQ 200
            +L +   +  +KK     S+   I+N+S           + F             AY  
Sbjct: 164 TYLASKACIPYLKK-----SKVAHILNISPP----LNLNPVWF---------KQHCAYTI 205

Query: 201 SKLANILHAKELAKHLKEDGVNITANSLHPGSIVT 235
           +K    ++   +A+  K     I  N+L P + + 
Sbjct: 206 AKYGMSMYVLGMAEEFKG---EIAVNALWPKTAIH 237

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  106 bits (266), Expect = 5e-27
 Identities = 66/239 (27%), Positives = 96/239 (40%), Gaps = 32/239 (13%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G  AIVTGA +GIG   AR LA  G HV+ A  +  A     +A   +I      A  +
Sbjct: 28  AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAA----DAAATKIG-CGAAACRV 82

Query: 88  DVSSLASVRKFASEYNSQ-GRPLNILINNAGI--MASPFMLSKDNIELQFATNHLGHFLL 144
           DVS    +        +  G  ++ L+ NAG+  +AS    + ++ +   A N  G +L 
Sbjct: 83  DVSDEQQIIAMVDACVAAFGG-VDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLC 141

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
           T      M +        G IVN+SS A       G          A    GAYG SK  
Sbjct: 142 TKHAAPRMIE-----RGGGAIVNLSSLA-------GQV--------AVGGTGAYGMSKAG 181

Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR-YNGILRGFCNTVGKLVLKNIPQG 262
            I  ++  A  L+  G  I +N+L P  + T + +    +  G     G   +    QG
Sbjct: 182 IIQLSRITAAELRSSG--IRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQG 238

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  105 bits (265), Expect = 6e-27
 Identities = 62/242 (25%), Positives = 88/242 (36%), Gaps = 36/242 (14%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G  A+VTG S GIG   A+ L   G  V +  R+  A  D    +          A+  
Sbjct: 28  AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY---GDCQAIPA 84

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIM-ASPFM-LSKDNIELQFATNHLGHFLLT 145
           D+SS A  R+ A         L+IL+NNAG    +          E     N    F   
Sbjct: 85  DLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCI 144

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
             LL  ++++A       R++N+ S A       GI       E AY    AYG SK A 
Sbjct: 145 QQLLPLLRRSASA-ENPARVINIGSVA-------GIS---AMGEQAY----AYGPSK-AA 188

Query: 206 ILH-----AKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIP 260
           +       AKEL         +I  N + PG   + +      +        +    +IP
Sbjct: 189 LHQLSRMLAKELVGE------HINVNVIAPGRFPSRM---TRHIAND-PQALEADSASIP 238

Query: 261 QG 262
            G
Sbjct: 239 MG 240

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  105 bits (264), Expect = 6e-27
 Identities = 48/221 (21%), Positives = 81/221 (36%), Gaps = 39/221 (17%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAM 85
               A+VTG+S G+G   A  LA  G ++++   N A  K       +EI     KV  +
Sbjct: 3   QNKCALVTGSSRGVGKAAAIRLAENGYNIVI---NYARSKKAALETAEEIEKLGVKVLVV 59

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLGHFL 143
           + +V   A +++   + +     L++ +NNA      P M L + + +     N      
Sbjct: 60  KANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLF 119

Query: 144 LTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNS-FGAYGQSK 202
                   M+K     +  G IV++SS                     Y   +   G SK
Sbjct: 120 CAQEAAKLMEK-----NGGGHIVSISSLG----------------SIRYLENYTTVGVSK 158

Query: 203 LANIL----HAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
            A        A EL+         I  N++  G+I T+  +
Sbjct: 159 AALEALTRYLAVELSPK------QIIVNAVSGGAIDTDALK 193

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  104 bits (263), Expect = 8e-27
 Identities = 57/218 (26%), Positives = 85/218 (38%), Gaps = 35/218 (16%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
               AIVTG +  IG      LA  G  VI+A  + A      E +  E     V ++ +
Sbjct: 12  DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME--GHDVSSVVM 69

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFML---SKDNIELQFATNHLGHFLL 144
           DV++  SV+      + Q   ++IL+  AGI  S       +      Q   N  G F  
Sbjct: 70  DVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRS 129

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
              +   M +  QK    G IV + S +       G+  ++   ++AYN+      SK A
Sbjct: 130 CQAVGRIMLE--QKQ---GVIVAIGSMS-------GLIVNRPQQQAAYNA------SK-A 170

Query: 205 NILH-----AKELAKHLKEDGVNITANSLHPGSIVTNL 237
            +       A E A H       I AN++ P  I T L
Sbjct: 171 GVHQYIRSLAAEWAPH------GIRANAVAPTYIETTL 202

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  104 bits (262), Expect = 1e-26
 Identities = 49/213 (23%), Positives = 87/213 (40%), Gaps = 35/213 (16%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAMELD 88
            A+VTG + GIG   +  LA  G  +  AV ++   ++     +K I +A  K   + LD
Sbjct: 4   VAMVTGGAQGIGRGISEKLAADGFDI--AVADLPQQEEQAAETIKLIEAADQKAVFVGLD 61

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGHFLLTH 146
           V+  A+      E   +    ++L+NNAGI    P + +++++++  ++ N    F    
Sbjct: 62  VTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQ 121

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI 206
                  +       +G+I+N +S A        I+         +    AY  +K A  
Sbjct: 122 AASRKFDE--LG--VKGKIINAASIA-------AIQ--------GFPILSAYSTTKFAVR 162

Query: 207 L----HAKELAKHLKEDGVNITANSLHPGSIVT 235
                 A+ELA          T N+  PG + T
Sbjct: 163 GLTQAAAQELAPK------GHTVNAYAPGIVGT 189

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  104 bits (261), Expect = 1e-26
 Identities = 49/238 (20%), Positives = 73/238 (30%), Gaps = 34/238 (14%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G   +VTG + GIG   A+  A  G  V +        +                  ++
Sbjct: 5   AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEA--------IGGAFFQV 56

Query: 88  DVSSLASVRKFASEYNSQ-GRPLNILINNAGIM--ASPFMLSKDNIELQFATNHLGHFLL 144
           D+       +F  E     GR +++L+NNA I    S   +           N      L
Sbjct: 57  DLEDERERVRFVEEAAYALGR-VDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHL 115

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
           + L    M+K        G IVNV+S         G+         A     AY  SK  
Sbjct: 116 SALAAREMRK-----VGGGAIVNVASVQ-------GLF--------AEQENAAYNASKGG 155

Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQG 262
            +   + LA  L      I  N++ PG+I T        L        +         
Sbjct: 156 LVNLTRSLALDLAPLR--IRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALR 211

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  104 bits (261), Expect = 2e-26
 Identities = 50/218 (22%), Positives = 82/218 (37%), Gaps = 33/218 (15%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G   +VTGA   IG  TA  LA  G  + +   N  A +    ++ ++    +  +   
Sbjct: 6   NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVC 63

Query: 88  DVSSLASVRKFASEYNSQ-GRPLNILINNAGIM--ASPFM-LSKDNIELQFATNHLGHFL 143
           DV+S  +V           G+ ++ L NNAG     +P      D+       N  G F 
Sbjct: 64  DVTSEEAVIGTVDSVVRDFGK-IDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFH 122

Query: 144 LTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNS--FGAYGQS 201
           +   +   M    Q     GRIVN +S A       G++     + +AY +        +
Sbjct: 123 VLKAVSRQMIT--QNY---GRIVNTASMA-------GVK--GPPNMAAYGTSKGAIIALT 168

Query: 202 KLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
           + A    A +LA +      NI  N++ PG +      
Sbjct: 169 ETA----ALDLAPY------NIRVNAISPGYMGPGFMW 196

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  104 bits (261), Expect = 2e-26
 Identities = 48/217 (22%), Positives = 86/217 (39%), Gaps = 38/217 (17%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAM-- 85
            G   ++TG+S+G+G   A   A     V++  R+         ++++EI     +A+  
Sbjct: 6   EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEA---NSVLEEIKKVGGEAIAV 62

Query: 86  ELDVSSLASVRK-FASEYNSQGRPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLGHF 142
           + DV+  + V     S     G+ L+++INNAG+        +S  +      TN  G F
Sbjct: 63  KGDVTVESDVINLVQSAIKEFGK-LDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAF 121

Query: 143 LLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSK 202
           L +   +    +        G ++N+SS               ++++  +  F  Y  SK
Sbjct: 122 LGSREAIKYFVE--NDIK--GTVINMSS---------------VHEKIPWPLFVHYAASK 162

Query: 203 LANIL----HAKELAKHLKEDGVNITANSLHPGSIVT 235
               L     A E A         I  N++ PG+I T
Sbjct: 163 GGMKLMTETLALEYAPK------GIRVNNIGPGAINT 193

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  104 bits (261), Expect = 2e-26
 Identities = 55/216 (25%), Positives = 79/216 (36%), Gaps = 30/216 (13%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
               AIVTGA SG+G   A  LA  G  V +A R + A     +    EI       +  
Sbjct: 27  GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDAL----QETAAEIG-DDALCVPT 81

Query: 88  DVSSLASVRKFASEYNSQ-GRPLNILINNAGIMASPFML---SKDNIELQFATNHLGHFL 143
           DV+   SVR   +    + GR +++L NNAG  A    +   +    +    TN  G FL
Sbjct: 82  DVTDPDSVRALFTATVEKFGR-VDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFL 140

Query: 144 LTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKL 203
            T      MK    +  R GRI+N  S               I+  S       Y  +K 
Sbjct: 141 CTQEAFRVMKA---QEPRGGRIINNGS---------------ISATSPRPYSAPYTATKH 182

Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
           A     K  +   +     I    +  G+  T + +
Sbjct: 183 AITGLTKSTSLDGRVHD--IACGQIDIGNADTPMAQ 216

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  103 bits (259), Expect = 3e-26
 Identities = 57/244 (23%), Positives = 93/244 (38%), Gaps = 37/244 (15%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
           +G  AIVTG S GIG   AR L   G  V +A  ++ A     +A+V  +      A+E+
Sbjct: 11  SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAA----QAVVAGLE-NGGFAVEV 65

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGHFLLT 145
           DV+  ASV     +        ++L  NAG+    P + ++ +  +  F  N  G FL  
Sbjct: 66  DVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLAN 125

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNS--FGAYGQSKL 203
            +           +   G IVN +S A +               + Y++  F  +G ++ 
Sbjct: 126 QIACRHFLA--SNTK--GVIVNTASLAAKVGAPL---------LAHYSASKFAVFGWTQA 172

Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVG-----KLVLKN 258
                A+E+A        NI  N + PG + T +     I       +         +  
Sbjct: 173 L----AREMAPK------NIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSL 222

Query: 259 IPQG 262
            P G
Sbjct: 223 TPLG 226

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  103 bits (260), Expect = 3e-26
 Identities = 51/221 (23%), Positives = 80/221 (36%), Gaps = 36/221 (16%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G  A+VTG  +G+G   A+ L+  G  V++  R           I        V A+  
Sbjct: 32  EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTG-NIVRAVVC 90

Query: 88  DVSSLASVRK-FASEYNSQGRPLNILINNAGIM--ASPFM-LSKDNIELQFATNHLGHFL 143
           DV     V   FA+      R L++L+NNAG      P   ++ +      A N  G FL
Sbjct: 91  DVGDPDQVAALFAAVRAEFAR-LDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFL 149

Query: 144 LTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKL 203
            T      MK    ++ R GRI+N  S               I+ ++   +   Y  +K 
Sbjct: 150 CTQHAFRMMKA---QTPRGGRIINNGS---------------ISAQTPRPNSAPYTATK- 190

Query: 204 ANILH-----AKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
             I       A +   H      +I    +  G+  T++  
Sbjct: 191 HAITGLTKSTALDGRMH------DIACGQIDIGNAATDMTA 225

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  103 bits (259), Expect = 3e-26
 Identities = 51/226 (22%), Positives = 82/226 (36%), Gaps = 43/226 (19%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAM 85
            G   +VTGAS GIG   A  L   G  V +  R++         + +E  S   +   +
Sbjct: 4   NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTL----RVVAQEAQSLGGQCVPV 59

Query: 86  ELDVSSLASVRKFASE--YNSQGRPLNILINNAGIMASPFMLSKDNIELQ---------F 134
             D S  + VR    +     QGR L++L+NNA       + +++    +          
Sbjct: 60  VCDSSQESEVRSLFEQVDREQQGR-LDVLVNNAYAGVQTILNTRNKAFWETPASMWDDIN 118

Query: 135 ATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNS 194
                GH+  +      M       + +G IV +SS          ++            
Sbjct: 119 NVGLRGHYFCSVYGARLMVP-----AGQGLIVVISSPG-------SLQ----------YM 156

Query: 195 FGA-YGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
           F   YG  K A    A + A  L+  G  ++  SL PG + T L +
Sbjct: 157 FNVPYGVGKAACDKLAADCAHELRRHG--VSCVSLWPGIVQTELLK 200

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  102 bits (258), Expect = 3e-26
 Identities = 55/223 (24%), Positives = 85/223 (38%), Gaps = 44/223 (19%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAM 85
                IVTG+  GIG   A  LA  G  V++A  N  A     EA+ K+I +      ++
Sbjct: 8   ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAA----EAVAKQIVADGGTAISV 63

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGIMAS----PFM-LSKDNIELQFATNHLG 140
            +DVS   S +  A    ++   ++ L+NNA I         + +  +  +   + N  G
Sbjct: 64  AVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDG 123

Query: 141 HFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQ 200
               T  +   M K  +     G IVN SS A                   Y++   YG 
Sbjct: 124 ALWCTRAVYKKMTK--RGG---GAIVNQSSTA-------AWL---------YSN--YYGL 160

Query: 201 SKLANIL----HAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
           +K+         ++EL         NI  N++ PG I T   R
Sbjct: 161 AKVGINGLTQQLSRELGGR------NIRINAIAPGPIDTEANR 197

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  103 bits (258), Expect = 4e-26
 Identities = 59/216 (27%), Positives = 94/216 (43%), Gaps = 36/216 (16%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAM 85
            G TA+VTG++SGIG   A+VLA  G ++++      A        + EI     K    
Sbjct: 3   KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPA------PALAEIARHGVKAVHH 56

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGHFL 143
             D+S +A +    +    +   ++IL+NNAGI   +P      ++ +   A N    F 
Sbjct: 57  PADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFH 116

Query: 144 LTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNS--FGAYGQS 201
            T L L  M+         GRI+N++S  H    S G        ++AY +   G  G +
Sbjct: 117 GTRLALPGMRA-----RNWGRIINIAS-VHGLVGSTG--------KAAYVAAKHGVVGLT 162

Query: 202 KLANILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
           K+       E A        N+T N++ PG ++T L
Sbjct: 163 KVV----GLETATS------NVTCNAICPGWVLTPL 188

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  103 bits (259), Expect = 4e-26
 Identities = 53/214 (24%), Positives = 79/214 (36%), Gaps = 33/214 (15%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
            AI+TGA  GIG ET+RVLA  G  V++A                 +         +D++
Sbjct: 13  VAIITGACGGIGLETSRVLARAGARVVLADLPETDL----AGAAASVG-RGAVHHVVDLT 67

Query: 91  SLASVRKFASEYNSQ-GRPLNILINNAGIMASPFML----SKDNIELQFATNHLGHFLLT 145
           +  SVR          GR L+I+ NNA       ML    + D  +  F  N  G  L+ 
Sbjct: 68  NEVSVRALIDFTIDTFGR-LDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMC 126

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
              +  +       +  G IVN+SS                    AY+   AY  +K A 
Sbjct: 127 KYAIPRLIS-----AGGGAIVNISSAT-------AHA--------AYDMSTAYACTKAAI 166

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
               + +A      G  +  N++ PG + T    
Sbjct: 167 ETLTRYVATQYGRHG--VRCNAIAPGLVRTPRLE 198

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  103 bits (259), Expect = 4e-26
 Identities = 42/216 (19%), Positives = 80/216 (37%), Gaps = 29/216 (13%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAI---VKEIPSA--KV 82
           +G T  +TGAS GIG   A   A  G +V +A ++  A   +   I      + +A  + 
Sbjct: 5   SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQG 64

Query: 83  DAMELDVSSLASVRKFASEYNSQ-GRPLNILINNAGIMA-SPFM-LSKDNIELQFATNHL 139
            A++ D+     VR   +      G  ++IL+NNA  +     +       +L    N  
Sbjct: 65  LALKCDIREEDQVRAAVAATVDTFGG-IDILVNNASAIWLRGTLDTPMKRFDLMQQVNAR 123

Query: 140 GHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYG 199
           G F+     L  + +     +    I+ ++                  + + + +   Y 
Sbjct: 124 GSFVCAQACLPHLLQ-----APNPHILTLAPPP-------------SLNPAWWGAHTGYT 165

Query: 200 QSKLANILHAKELAKHLKEDGVNITANSLHPGSIVT 235
            +K+   L    LA      G  +  N+L P +++ 
Sbjct: 166 LAKMGMSLVTLGLAAEFGPQG--VAINALWPRTVIA 199

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  103 bits (259), Expect = 4e-26
 Identities = 62/242 (25%), Positives = 90/242 (37%), Gaps = 40/242 (16%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
           +G  A++TGAS+GIG + A   A  G  V +A R+  A + V + I       K   +  
Sbjct: 31  SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV--GGKALPIRC 88

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGHFLLT 145
           DV+    VR    +   +   ++I + NAGI      + +  +  +    TN  G FL  
Sbjct: 89  DVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTA 148

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
                 M    Q     G I+  +S +       G   +     S Y +      SK A 
Sbjct: 149 QAAARAMVD--QG--LGGTIITTASMS-------GHIINIPQQVSHYCT------SK-AA 190

Query: 206 ILH-----AKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIP 260
           ++H     A ELA H       I  NS+ PG I T L                L    IP
Sbjct: 191 VVHLTKAMAVELAPH------QIRVNSVSPGYIRTELVE-------PLADYHALWEPKIP 237

Query: 261 QG 262
            G
Sbjct: 238 LG 239

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  102 bits (257), Expect = 7e-26
 Identities = 48/212 (22%), Positives = 81/212 (38%), Gaps = 39/212 (18%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
            AIVTG SSGIG      L   G  V+    +  +  +V             D  ++DV+
Sbjct: 16  VAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNV------------SDHFKIDVT 63

Query: 91  SLASVRKFASEYNSQ-GRPLNILINNAGI--MASPFMLSKDNIELQFATNHLGHFLLTHL 147
           +   V++   +   + GR ++IL+NNAGI   +   +   +        N  G +L+   
Sbjct: 64  NEEEVKEAVEKTTKKYGR-IDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKY 122

Query: 148 LLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANIL 207
            +  M          G I+N++S                    A  +  AY  SK A + 
Sbjct: 123 TIPVMLA-----IGHGSIINIASVQ-------SYA--------ATKNAAAYVTSKHALLG 162

Query: 208 HAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
             + +A         I  N++ PG+I+T +  
Sbjct: 163 LTRSVAIDY---APKIRCNAVCPGTIMTPMVI 191

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  101 bits (255), Expect = 1e-25
 Identities = 54/217 (24%), Positives = 94/217 (43%), Gaps = 35/217 (16%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
           TG TA+VTG++ G+G   A  LA  G  VI+         +  + + ++        +  
Sbjct: 8   TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK--GYDAHGVAF 65

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGHFLLT 145
           DV+   ++    S+ +++G  ++ILINNAGI    P + L  +N +    TN    FL++
Sbjct: 66  DVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVS 125

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
                 M    + S   G+I+N+ S               +  ++A  +   Y  +K   
Sbjct: 126 RSAAKRMIA--RNSG--GKIINIGS---------------LTSQAARPTVAPYTAAK-GG 165

Query: 206 ILH-----AKELAKHLKEDGVNITANSLHPGSIVTNL 237
           I       A E A+       NI  N++ PG I+T++
Sbjct: 166 IKMLTCSMAAEWAQF------NIQTNAIGPGYILTDM 196

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  101 bits (255), Expect = 1e-25
 Identities = 51/216 (23%), Positives = 75/216 (34%), Gaps = 32/216 (14%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAM 85
           T  T +V GA   IG   A   A  G +V++         +     V EI        A+
Sbjct: 7   TNRTIVVAGAGRDIGRACAIRFAQEGANVVL---TYNGAAEGAATAVAEIEKLGRSALAI 63

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGIMA--SPFM-LSKDNIELQFATNHLGHF 142
           + D+++ A V    S    +   ++ L++ AG +        + +         N    F
Sbjct: 64  KADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLF 123

Query: 143 LLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSK 202
           L     L  M K        G IV  SS+A R     G                AY  SK
Sbjct: 124 LTAKTALPKMAKG-------GAIVTFSSQAGRDGGGPG--------------ALAYATSK 162

Query: 203 LANILHAKELAKHLKEDGVNITANSLHPGSIVTNLF 238
            A +   + LAK +   G  I  N++ PG I T   
Sbjct: 163 GAVMTFTRGLAKEV---GPKIRVNAVCPGMISTTFH 195

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  101 bits (255), Expect = 1e-25
 Identities = 39/210 (18%), Positives = 66/210 (31%), Gaps = 31/210 (14%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
           +    ++TGAS  +G   A  L   G  VI++ R          A V E+  A   A+  
Sbjct: 26  SSAPILITGASQRVGLHCALRLLEHGHRVIISYRT-------EHASVTELRQAGAVALYG 78

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGI-MASPFMLSKDNIELQFATNHLGHFLLTH 146
           D S    +  F     +Q   L  +++NA   +A       DN    F+ + L  +L+  
Sbjct: 79  DFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINL 138

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI 206
                +       S    IV++S                       +   AY  +K    
Sbjct: 139 HCEPLLTA-----SEVADIVHISD---------------DVTRKGSSKHIAYCATKAGLE 178

Query: 207 LHAKELAKHLKEDGVNITANSLHPGSIVTN 236
                 A         +  N + P  ++  
Sbjct: 179 SLTLSFAARF---APLVKVNGIAPALLMFQ 205

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  101 bits (254), Expect = 1e-25
 Identities = 52/215 (24%), Positives = 76/215 (35%), Gaps = 40/215 (18%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
                IVTGAS GIG   A      G  VI    +                 AK D +E 
Sbjct: 7   RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGE-------------AKYDHIEC 53

Query: 88  DVSSLASVRKFASEYNSQ-GRPLNILINNAGIM--ASPFMLSKDNIELQFATNHLGHFLL 144
           DV++   V+        + G  +++L+NNAGI        +S          N  G++  
Sbjct: 54  DVTNPDQVKASIDHIFKEYGS-ISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYA 112

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
           +   +  M +     SR+  IVN+SS                       +  AY  SK A
Sbjct: 113 SKFAIPYMIR-----SRDPSIVNISSVQ-------ASI--------ITKNASAYVTSKHA 152

Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
            I   K +A         +  N++ P +I T L R
Sbjct: 153 VIGLTKSIALDY---APLLRCNAVCPATIDTPLVR 184

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  101 bits (253), Expect = 3e-25
 Identities = 45/214 (21%), Positives = 72/214 (33%), Gaps = 37/214 (17%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G  A+VTGA+ GIG      L   G  V +A R +A               A    +  
Sbjct: 27  EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGI-------------AADLHLPG 73

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMAS-PFM-LSKDNIELQFATNHLGHFLLT 145
           D+   A          +    L+I++NNAG+++       +  +  L    N    F + 
Sbjct: 74  DLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRIC 133

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
              +  M       +  G IVNV+S         G+R               Y  +K A 
Sbjct: 134 RAAIPLMAA-----AGGGAIVNVASCW-------GLR--------PGPGHALYCLTKAAL 173

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
               + +       G  I  N++ P  + T + R
Sbjct: 174 ASLTQCMGMDHAPQG--IRINAVCPNEVNTPMLR 205

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  100 bits (251), Expect = 4e-25
 Identities = 53/217 (24%), Positives = 82/217 (37%), Gaps = 37/217 (17%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G  A VTGA SGIG E  R  A  G  +I+  R  AA     +   +E+ +A    +  
Sbjct: 10  DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAAL----DRAAQELGAAVAARIVA 65

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGHFLLT 145
           DV+   ++   A+E  +    ++IL+N+AGI      +           A N  G F  +
Sbjct: 66  DVTDAEAMTAAAAEAEAVAP-VSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWAS 124

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
                 M          G IVN+ S +       G   ++    S+Y +      SK   
Sbjct: 125 RAFGRAMVA-----RGAGAIVNLGSMS-------GTIVNRPQFASSYMA------SK-GA 165

Query: 206 ILH-----AKELAKHLKEDGVNITANSLHPGSIVTNL 237
           +       A E A         +  N+L PG + T +
Sbjct: 166 VHQLTRALAAEWAGR------GVRVNALAPGYVATEM 196

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score =  100 bits (252), Expect = 8e-25
 Identities = 52/224 (23%), Positives = 86/224 (38%), Gaps = 41/224 (18%)

Query: 31  TAIVTGASSGIGTETARVLA---LRGVHVIMAVRNMAAGKDVRE-AIVKEIPSAKVDAME 86
             ++TG SSGIG   A  LA    +   V   +R++     + E A     P   ++ ++
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQ 63

Query: 87  LDVSSLASVRKFASEYNSQGRPLNILINNAGI-MASPF-MLSKDNIELQFATNHLGHFLL 144
           LDV    SV        ++GR +++L+ NAG+ +  P   L +D +      N +G   +
Sbjct: 64  LDVRDSKSVAAARERV-TEGR-VDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRM 121

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
               L  MK+  + S   GR++   S                     +N    Y  SK  
Sbjct: 122 LQAFLPDMKR--RGS---GRVLVTGSVGGLMGL-------------PFN--DVYCASK-- 159

Query: 205 NILHAKE-----LAKHLKEDGVNITANSLHPGSIVTNLFRYNGI 243
               A E     LA  L   GV+++   +  G + T  F    +
Sbjct: 160 ---FALEGLCESLAVLLLPFGVHLSL--IECGPVHTA-FMEKVL 197

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 99.7 bits (249), Expect = 8e-25
 Identities = 40/223 (17%), Positives = 81/223 (36%), Gaps = 45/223 (20%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
             +++G ++GIG  T +VL   G  ++          D+R+A            +  D+S
Sbjct: 3   IIVISGCATGIGAATRKVLEAAGHQIVGI--------DIRDA-----------EVIADLS 43

Query: 91  SLASVRKFASEYNSQ-GRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLL 149
           +    ++  ++  ++  + ++ L+  AG+           +    + N+ G   L    L
Sbjct: 44  TAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQT-----KVLGNVVSVNYFGATELMDAFL 98

Query: 150 DTMKKTAQKSSREGRIVNVSSEA-------HRFAYSEGIRFDKINDESAYNSFG------ 196
             +KK       +   V +SS A                  ++    +     G      
Sbjct: 99  PALKK-----GHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNL 153

Query: 197 AYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
           AY  SK A  +  ++ A    E G  +  N++ PG+  T L +
Sbjct: 154 AYAGSKNALTVAVRKRAAAWGEAG--VRLNTIAPGATETPLLQ 194

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  100 bits (250), Expect = 8e-25
 Identities = 42/233 (18%), Positives = 76/233 (32%), Gaps = 50/233 (21%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA---KVDA 84
               A++TG +  IG   A  L  +G  V++   +    +   + +V E+ +A       
Sbjct: 10  ECPAAVITGGARRIGHSIAVRLHQQGFRVVV---HYRHSEGAAQRLVAELNAARAGSAVL 66

Query: 85  MELDVSSLASVRK-----FASEYNSQGRPLNILINNAGIMA-SPFMLSKDNIEL------ 132
            + D+S  +S+           + + GR  ++L+NNA     +P +   D          
Sbjct: 67  CKGDLSLSSSLLDCCEDIIDCSFRAFGR-CDVLVNNASAYYPTPLLPGDDTNGAADAKPI 125

Query: 133 ------QFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI 186
                  F +N +    L         +     SR   +VN+                  
Sbjct: 126 DAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD---------------A 170

Query: 187 NDESAYNSFGAYGQSKLANIL----HAKELAKHLKEDGVNITANSLHPGSIVT 235
             +     F  Y  +K A        A ELA        +I  N++ PG  + 
Sbjct: 171 MTDLPLPGFCVYTMAKHALGGLTRAAALELAPR------HIRVNAVAPGLSLL 217

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score = 99.1 bits (248), Expect = 9e-25
 Identities = 52/221 (23%), Positives = 80/221 (36%), Gaps = 50/221 (22%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAM 85
               A++TG ++GIG   A   A+ G  + +A    A            I +   +V  +
Sbjct: 6   KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA------PEAEAAIRNLGRRVLTV 59

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLGHFL 143
           + DVS    V  F  +  S     +IL+NNAGI    PF  L+ +  +  F  N    FL
Sbjct: 60  KCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFL 119

Query: 144 LTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQ--- 200
           +    +  MK+        GRI+N++S                                 
Sbjct: 120 MAKAFVPGMKR--NGW---GRIINLTSTT-------YWL-------------KIEAYTHY 154

Query: 201 --SKLANIL----HAKELAKHLKEDGVNITANSLHPGSIVT 235
             +K ANI      A +L K        IT N++ P  + T
Sbjct: 155 ISTKAANIGFTRALASDLGKD------GITVNAIAPSLVRT 189

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score = 99.5 bits (249), Expect = 1e-24
 Identities = 38/217 (17%), Positives = 75/217 (34%), Gaps = 33/217 (15%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVR-NMAAGKDVREAIVKEIPSAKVDAME 86
                ++ G    +G  TA+  AL  V++   +  + A   D    +  E+         
Sbjct: 10  KNKVIVIAGGIKNLGALTAKTFALESVNL--VLHYHQAKDSDTANKLKDELEDQGAKVAL 67

Query: 87  L--DVSSLASVRK-FASEYNSQGRPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLGH 141
              D+S+   V K F       G+ ++I IN  G +   P +  S+   +     N+   
Sbjct: 68  YQSDLSNEEEVAKLFDFAEKEFGK-VDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVA 126

Query: 142 FLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQS 201
           +         M          G I+ +++ +   AY+                +  Y  +
Sbjct: 127 YFFIKQAAKHMNP-------NGHIITIAT-SLLAAYTGF--------------YSTYAGN 164

Query: 202 KLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLF 238
           K     + +  +K L      I+ N++ PG + T+ F
Sbjct: 165 KAPVEHYTRAASKELM--KQQISVNAIAPGPMDTSFF 199

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 99.2 bits (248), Expect = 2e-24
 Identities = 45/218 (20%), Positives = 76/218 (34%), Gaps = 36/218 (16%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAM 85
               AIVTG   GIG   AR LA  G  + +         +    ++ E+     +V  +
Sbjct: 28  ARPVAIVTGGRRGIGLGIARALAASGFDIAI---TGIGDAEGVAPVIAELSGLGARVIFL 84

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGIMAS---PFM-LSKDNIELQFATNHLGH 141
             D++ L+S +       ++   ++ L+NNAGI +     F+ L  +N +     N  G 
Sbjct: 85  RADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGT 144

Query: 142 FLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQS 201
              T  +L  M      +     I+N++S               ++          Y  S
Sbjct: 145 VFFTQAVLKAMLA--SDARASRSIINITS---------------VSAVMTSPERLDYCMS 187

Query: 202 KLANI----LHAKELAKHLKEDGVNITANSLHPGSIVT 235
           K          A  LA+        I    + PG I +
Sbjct: 188 KAGLAAFSQGLALRLAET------GIAVFEVRPGIIRS 219

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 99.7 bits (249), Expect = 2e-24
 Identities = 46/218 (21%), Positives = 75/218 (34%), Gaps = 38/218 (17%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA---KVDA 84
            G  AIVTG ++GIG    + L   G +V++A R +   K   + +   +P     +V  
Sbjct: 17  QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIP 76

Query: 85  MELDVSSLASVRKFASEYNSQGRPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGHF 142
           ++ ++ +   V             +N L+NN G    SP   +S         TN  G F
Sbjct: 77  IQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTF 136

Query: 143 LLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSK 202
            +   +  +  K        G IVN+           G                  G ++
Sbjct: 137 YMCKAVYSSWMK-----EHGGSIVNIIV-----PTKAGFPL-----------AVHSGAAR 175

Query: 203 LANILH-----AKELAKHLKEDGVNITANSLHPGSIVT 235
            A + +     A E A         I  N + PG I +
Sbjct: 176 -AGVYNLTKSLALEWACS------GIRINCVAPGVIYS 206

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score = 98.8 bits (247), Expect = 2e-24
 Identities = 42/218 (19%), Positives = 80/218 (36%), Gaps = 38/218 (17%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEI-PSAKVDAMELDV 89
            AI+TG + GIG  TA++    G  V++A      G    + +   I     +  +  DV
Sbjct: 18  VAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHG----QKVCNNIGSPDVISFVHCDV 73

Query: 90  SSLASVRKF----ASEYNSQGRPLNILINNAGIMASPFM----LSKDNIELQFATNHLGH 141
           +    VR       +++   G+ L+I+  N G++++          ++ +     N  G 
Sbjct: 74  TKDEDVRNLVDTTIAKH---GK-LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGA 129

Query: 142 FLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQS 201
           FL+       M       +++G IV  +S +                 +       Y  +
Sbjct: 130 FLVAKHAARVMIP-----AKKGSIVFTASIS-------SFT-------AGEGVSHVYTAT 170

Query: 202 KLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
           K A +     L   L E G+ +  N + P  + + L  
Sbjct: 171 KHAVLGLTTSLCTELGEYGIRV--NCVSPYIVASPLLT 206

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 99.8 bits (249), Expect = 2e-24
 Identities = 44/217 (20%), Positives = 79/217 (36%), Gaps = 36/217 (16%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA---KVDAMEL 87
             ++TGASSG G  TA  LA  G  V  ++R++          +          +  +EL
Sbjct: 7   IILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLEL 66

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFM--LSKDNIELQFATNHLGHFLLT 145
           DV S  SV +   +   +   +++LI+NAG M        + +     +  N L    + 
Sbjct: 67  DVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVN 126

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
              L  M++  QK    G ++ +SS +        +                Y  +K   
Sbjct: 127 RAALPHMRR--QKH---GLLIWISSSSSAGGTPPYL--------------APYFAAK--- 164

Query: 206 ILHAKE-----LAKHLKEDGVNITANSLHPGSIVTNL 237
              A +      A+ L   G+  +   + PG+  +  
Sbjct: 165 --AAMDAIAVQYARELSRWGIETSI--IVPGAFTSGT 197

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 98.0 bits (245), Expect = 2e-24
 Identities = 55/251 (21%), Positives = 80/251 (31%), Gaps = 60/251 (23%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
           +G    VTGA  GIG  TA      G  V    +                         +
Sbjct: 6   SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE------------QYPFATEVM 53

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLGHFLLT 145
           DV+  A V +      ++   L+ L+N AGI+       LSK++ +  FA N  G F L 
Sbjct: 54  DVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLF 113

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQ----- 200
              ++  ++      R G IV V+S+A                          G      
Sbjct: 114 QQTMNQFRR-----QRGGAIVTVASDA-------AHT-------------PRIGMSAYGA 148

Query: 201 SKLANILH-----AKELAKHLKEDGVNITANSLHPGSIVT----NLFRYNGILRGFCNTV 251
           SK A +         ELA         +  N + PGS  T     L+  +          
Sbjct: 149 SK-AALKSLALSVGLELAGS------GVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGF 201

Query: 252 GKLVLKNIPQG 262
           G+     IP G
Sbjct: 202 GEQFKLGIPLG 212

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 98.5 bits (246), Expect = 3e-24
 Identities = 52/243 (21%), Positives = 94/243 (38%), Gaps = 51/243 (20%)

Query: 17  TAEEVTQG-------IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDV 69
           T E  TQG           G +AIV+G + G+G  T R L   G+ V++A      G   
Sbjct: 11  TLEAQTQGPGSMVTIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKG--- 67

Query: 70  REAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDN 129
            +A+  E+   + + +  +V+S  SV       N  GR    ++ + G   +  ++ +D 
Sbjct: 68  -KALADEL-GNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDG 125

Query: 130 IEL---QF----ATNHLGHFLLTHLLLDTMKKTAQKSSRE-GRIVNVSSEAHRFAYSEGI 181
                  F         G + +  L+  ++     + + E G +V  +S     A  EG 
Sbjct: 126 SPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTAS----IAGYEG- 180

Query: 182 RFDKINDESAYNSFG--AYGQSKLANILH-----AKELAKHLKEDGVNITANSLHPGSIV 234
                         G  AY  +K A ++      A++L+         I  N++ PG++ 
Sbjct: 181 ------------QIGQTAYAAAK-AGVIGLTIAAARDLSSA------GIRVNTIAPGTMK 221

Query: 235 TNL 237
           T +
Sbjct: 222 TPI 224

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score = 97.6 bits (244), Expect = 4e-24
 Identities = 56/220 (25%), Positives = 84/220 (38%), Gaps = 44/220 (20%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G + +VTG + GIG   A V A  G +V +A R+ A        + +     KV  ++ 
Sbjct: 9   QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGS-GKVIGVQT 67

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGHFLLT 145
           DVS  A     A     +   ++++  NAG+   +P   ++ + +   FA N  G F   
Sbjct: 68  DVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAV 127

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQ----- 200
              LD +       S  GR+V  SS                         G  G      
Sbjct: 128 QACLDALIA-----SGSGRVVLTSSITGPIT-------------------GYPGWSHYGA 163

Query: 201 SKLANIL-----HAKELAKHLKEDGVNITANSLHPGSIVT 235
           +K A  L      A ELA H       IT N++ PG+I+T
Sbjct: 164 TK-AAQLGFMRTAAIELAPH------KITVNAIMPGNIMT 196

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score = 98.1 bits (245), Expect = 5e-24
 Identities = 46/231 (19%), Positives = 75/231 (32%), Gaps = 25/231 (10%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMA--------VRNMAAGKDVREAIVKEIPS 79
                +VTG + G G   A  LA  G  +I+              A     E    E+  
Sbjct: 9   QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEK 68

Query: 80  A--KVDAMELDVSSLASVRKFASEYNSQ-GRPLNILINNAGIMASPFMLSKDNIELQFAT 136
              K    E+DV   A+V +  +   ++ G+ L++++ NAGI      L        F  
Sbjct: 69  TGRKAYTAEVDVRDRAAVSRELANAVAEFGK-LDVVVANAGICPLGAHLPVQAFADAFDV 127

Query: 137 NHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFG 196
           + +G     H  L  +            I+   S A                        
Sbjct: 128 DFVGVINTVHAALPYLTSG-------ASIITTGSVAGL----IAAAQPPGAGGPQGPGGA 176

Query: 197 AYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGF 247
            Y  +K     +  +LA  L      I AN +HP ++ T++     + R F
Sbjct: 177 GYSYAKQLVDSYTLQLAAQLAPQS--IRANVIHPTNVNTDMLNSAPMYRQF 225

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 98.1 bits (245), Expect = 6e-24
 Identities = 57/250 (22%), Positives = 84/250 (33%), Gaps = 60/250 (24%)

Query: 7   KGPSGFSASSTAEEVTQGI--DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMA 64
           +GP       +AE   + +  D +  + +VTG + GIG   A V A  G +V +A R+  
Sbjct: 17  QGPGSMLVVESAEPAERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPR 76

Query: 65  AGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFM 124
               V   +  E+ +  V  + LDVS   S    A         L+++  NAGI      
Sbjct: 77  ELSSVTAEL-GELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGI------ 129

Query: 125 LSKDNI-----ELQF----ATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRF 175
              +         Q       N  G        L  +       S  GR++  SS     
Sbjct: 130 -FPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTA-----SGRGRVILTSSITGPV 183

Query: 176 AYSEGIRFDKINDESAYNSFGAYGQ-----SKLANILH-----AKELAKHLKEDGVNITA 225
                               G  G      SK A  L      A ELA         +T 
Sbjct: 184 T-------------------GYPGWSHYGASK-AAQLGFMRTAAIELAPR------GVTV 217

Query: 226 NSLHPGSIVT 235
           N++ PG+I+T
Sbjct: 218 NAILPGNILT 227

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 96.9 bits (242), Expect = 8e-24
 Identities = 57/233 (24%), Positives = 86/233 (36%), Gaps = 63/233 (27%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAI-----VKEIPSAKV 82
               A+VTGA SGIG   +  LA  G  V     + AA ++    +      +  P    
Sbjct: 6   RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNH 65

Query: 83  DAMELDVSSLASVRKFASEYNSQ-GRPLNILINNAGIMASPFMLSKDNI-----ELQF-- 134
            A + DVS   + R    +  +   RP +++++ AGI       ++D       E  +  
Sbjct: 66  AAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGI-------TQDEFLLHMSEDDWDK 118

Query: 135 --ATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAY 192
             A N  G FL+T      +     +    G I+N+SS         G            
Sbjct: 119 VIAVNLKGTFLVTQAAAQALVSNGCR----GSIINISSIV-------GKV---------- 157

Query: 193 NSFGAYGQ-----SKLANIL-----HAKELAKHLKEDGVNITANSLHPGSIVT 235
              G  GQ     SK A ++      A+EL +H       I  NS+ PG I T
Sbjct: 158 ---GNVGQTNYAASK-AGVIGLTQTAARELGRH------GIRCNSVLPGFIAT 200

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 97.3 bits (243), Expect = 9e-24
 Identities = 61/259 (23%), Positives = 84/259 (32%), Gaps = 63/259 (24%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
              TA VTG SSGIG   AR LA RG+ V    R+        + +        VD    
Sbjct: 23  RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA--GHDVDGSSC 80

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQF---------ATNH 138
           DV+S   V    +    +  P+ IL+N+AG        +                  TN 
Sbjct: 81  DVTSTDEVHAAVAAAVERFGPIGILVNSAGR-------NGGGETADLDDALWADVLDTNL 133

Query: 139 LGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAY 198
            G F +T  +L             GRIVN++S         G +             G  
Sbjct: 134 TGVFRVTREVLRAGGMREAGW---GRIVNIASTG-------GKQ-------------GVM 170

Query: 199 GQ-----SKLANIL-----HAKELAKHLKEDGVNITANSLHPGSIVTNLFR-----YNGI 243
                  SK   ++        ELAK        IT N++ PG + T +       Y   
Sbjct: 171 YAAPYTASK-HGVVGFTKSVGFELAKT------GITVNAVCPGYVETPMAERVREGYARH 223

Query: 244 LRGFCNTVGKLVLKNIPQG 262
                  V +     IP G
Sbjct: 224 WGVTEQEVHERFNAKIPLG 242

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score = 96.5 bits (241), Expect = 1e-23
 Identities = 40/212 (18%), Positives = 78/212 (36%), Gaps = 37/212 (17%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
                ++TGAS GIG    R    R   V+   R++    D             +  +  
Sbjct: 27  QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD-----------PDIHTVAG 75

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGHFLLT 145
           D+S   +  +   E   +   ++ L+NNAG+ +A PF+ +++++ +     N  G F +T
Sbjct: 76  DISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHIT 135

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNS--FGAYGQSKL 203
                 M K        G IV++++           +       +  +    G    ++ 
Sbjct: 136 QRAAAEMLKQ-----GSGHIVSITTSL-------VDQPMVGMPSALASLTKGGLNAVTRS 183

Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVT 235
                A E ++        +  N++ PG I T
Sbjct: 184 L----AMEFSRS------GVRVNAVSPGVIKT 205

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score = 96.5 bits (241), Expect = 2e-23
 Identities = 44/215 (20%), Positives = 73/215 (33%), Gaps = 35/215 (16%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
               A +TG  SGIG   A +    G H ++A R++         +       +   + +
Sbjct: 26  RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATG-RRCLPLSM 84

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGHFLLT 145
           DV +  +V     +   +   ++ILIN A      P   LS +  +     +  G F ++
Sbjct: 85  DVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVS 144

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
            +L +   +        G IVN+++                    A       G +K A 
Sbjct: 145 RVLYEKFFR-----DHGGVIVNITATLGNRG-------------QALQV--HAGSAK-AA 183

Query: 206 ILH-----AKELAKHLKEDGVNITANSLHPGSIVT 235
           +       A E          NI  NSL PG I  
Sbjct: 184 VDAMTRHLAVEWGPQ------NIRVNSLAPGPISG 212

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score = 95.3 bits (238), Expect = 2e-23
 Identities = 35/245 (14%), Positives = 74/245 (30%), Gaps = 52/245 (21%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAM-ELDV 89
            A+VT A    G      L   G  V+    + A      E    E  +    A+ E   
Sbjct: 3   IALVTHARHFAGPAAVEALTQDGYTVVCHDASFADA---AERQRFESENPGTIALAEQKP 59

Query: 90  SSL--ASVRKFASEYNSQGRPLNILINNAGI----MASPFM-LSKDNIELQFATNHLGHF 142
             L  A+++            ++ +++N  I       P    S+ +I   F    +   
Sbjct: 60  ERLVDATLQHG-------EA-IDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPI 111

Query: 143 LLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSK 202
           LL    +  ++      +    ++ ++S   +               +       YG ++
Sbjct: 112 LLLQSAIAPLRA-----AGGASVIFITSSVGKKP----------LAYNP-----LYGPAR 151

Query: 203 LANILH-----AKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLK 257
            A  +      AK L++        I   ++ P       +            + + V +
Sbjct: 152 -AATVALVESAAKTLSRD------GILLYAIGPNFFNNPTYFPTSDWENN-PELRERVDR 203

Query: 258 NIPQG 262
           ++P G
Sbjct: 204 DVPLG 208

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 95.1 bits (237), Expect = 3e-23
 Identities = 30/215 (13%), Positives = 56/215 (26%), Gaps = 35/215 (16%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
           +    IV G    +G+         G  V+    +     D    +              
Sbjct: 2   SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILV----------DGNK 51

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGHFLL 144
           + +         +  + QG  ++ +   AG  A   +       N +L    +     + 
Sbjct: 52  NWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIA 111

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
             L    +K         G +    + A   A                 S   YG +K A
Sbjct: 112 AKLATTHLKPG-------GLLQLTGAAA---AM------------GPTPSMIGYGMAKAA 149

Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
                  LA        N    ++ P ++ T + R
Sbjct: 150 VHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNR 184

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 95.4 bits (238), Expect = 3e-23
 Identities = 59/276 (21%), Positives = 94/276 (34%), Gaps = 67/276 (24%)

Query: 13  SASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREA 72
            +S      +         A+VTGA+SGIG E AR L   G+ V +  R           
Sbjct: 6   HSSGLVPRGSHMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGL----RT 61

Query: 73  IVKEIPSA--KVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNI 130
            +KE+  A  + D    DV S+  +    +    +  P+++L+NNAG             
Sbjct: 62  TLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGR-------PGGGA 114

Query: 131 -----ELQF----ATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI 181
                +  +     TN  G F +T  +L       + +   GRIVN++S         G 
Sbjct: 115 TAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGT---GRIVNIASTG-------GK 164

Query: 182 RFDKINDESAYNSFGAYGQ-----SKLANIL-----HAKELAKHLKEDGVNITANSLHPG 231
           +             G         SK   ++        ELA+        IT N++ PG
Sbjct: 165 Q-------------GVVHAAPYSASK-HGVVGFTKALGLELART------GITVNAVCPG 204

Query: 232 SIVTN-----LFRYNGILRGFCNTVGKLVLKNIPQG 262
            + T         Y+ I           +   +P G
Sbjct: 205 FVETPMAASVREHYSDIWEVSTEEAFDRITARVPIG 240

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 94.5 bits (236), Expect = 5e-23
 Identities = 47/212 (22%), Positives = 71/212 (33%), Gaps = 45/212 (21%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
                +V  AS GIG   A VL+  G  V +  RN    K      V             
Sbjct: 18  RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVV------------ 65

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGHFLLT 145
                  +RK       + + ++IL+ NAG   A  F  L+ ++ +    +  L    + 
Sbjct: 66  -----CDLRKDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIV 120

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSF--GAYGQSKL 203
              L  MK+        GRIV ++S +             I +    NS      G  K 
Sbjct: 121 RNYLPAMKE-----KGWGRIVAITSFSVI----SP-----IENLYTSNSARMALTGFLKT 166

Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVT 235
                + E+A +       IT N + PG   T
Sbjct: 167 L----SFEVAPY------GITVNCVAPGWTET 188

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 94.9 bits (237), Expect = 5e-23
 Identities = 49/219 (22%), Positives = 78/219 (35%), Gaps = 50/219 (22%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
           +G T +VTGA+SGIG     + A  G  ++   R      +   A+      A+  A+  
Sbjct: 5   SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVA 59

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGHFLLT 145
           DVS   +V    +E   +   L+ + + AG+  ++    L  +  E     N  G FL+ 
Sbjct: 60  DVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVA 119

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQ----- 200
               + ++         G +V   S A                       GA+G      
Sbjct: 120 RKAGEVLE-------EGGSLVLTGSVAG---------------------LGAFGLAHYAA 151

Query: 201 SKLANIL----HAKELAKHLKEDGVNITANSLHPGSIVT 235
            KL  +      A ELA+        +  N L PG I T
Sbjct: 152 GKLGVVGLARTLALELARK------GVRVNVLLPGLIQT 184

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score = 95.0 bits (237), Expect = 7e-23
 Identities = 54/242 (22%), Positives = 84/242 (34%), Gaps = 37/242 (15%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G  A +TG  +G+G     +L+  G   ++A R M   K   E I  +    KV A++ 
Sbjct: 25  QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG-NKVHAIQC 83

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGHFLLT 145
           DV     V+   SE        NI+INNA     SP   LS +  +        G   +T
Sbjct: 84  DVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVT 143

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
             +   + K AQK       +++++                   S +        +K A 
Sbjct: 144 LEIGKQLIK-AQKG---AAFLSITTIYAETG-------------SGF--VVPSASAK-AG 183

Query: 206 ILH-----AKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIP 260
           +       A E  K+       +  N + PG I T              T  K ++  IP
Sbjct: 184 VEAMSKSLAAEWGKY------GMRFNVIQPGPIKTKG---AFSRLDPTGTFEKEMIGRIP 234

Query: 261 QG 262
            G
Sbjct: 235 CG 236

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 94.6 bits (236), Expect = 1e-22
 Identities = 51/240 (21%), Positives = 92/240 (38%), Gaps = 48/240 (20%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMA--------VRNMAAGKDVREAIVKEIPS 79
            G  A +TGA+ G G   A  LA  G  +I          V+   +  D     V+++ +
Sbjct: 27  EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEA 86

Query: 80  A--KVDAMELDVSSLASVRKFASEYNSQ-GRPLNILINNAGIMASPFMLSKDNIELQF-- 134
              ++ A ++DV    +++    +  +Q GR L+I++ NA + +    L++ + +  +  
Sbjct: 87  LGRRIIASQVDVRDFDAMQAAVDDGVTQLGR-LDIVLANAALASEGTRLNRMDPK-TWRD 144

Query: 135 --ATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAY 192
               N  G ++   + +  +    ++    G IV  SS         G+R          
Sbjct: 145 MIDVNLNGAWITARVAIPHIMA-GKRG---GSIVFTSSIG-------GLR--------GA 185

Query: 193 NSFGAYGQSK-----LANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGF 247
            + G Y  SK     L   + A EL         NI  N + P S+ T +       R F
Sbjct: 186 ENIGNYIASKHGLHGLMRTM-ALELGPR------NIRVNIVCPSSVATPMLLNEPTYRMF 238

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score = 93.7 bits (234), Expect = 1e-22
 Identities = 48/241 (19%), Positives = 91/241 (37%), Gaps = 45/241 (18%)

Query: 8   GPSGFSASSTAEEVTQGIDGTGLTAIVTGAS-SGIGTETARVLALRGVHVIMAVRNMAAG 66
           GP   + S   +E+       G   +VT A+ +GIG+ TAR   L G  V+++  +    
Sbjct: 1   GPGSMNLSEAPKEIDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRL 60

Query: 67  KDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ-GRPLNILINNAGI-MASPFM 124
            + R+ +  ++   +V+A+  DV+S  +V    ++   + GR L++L+NNAG+   +P +
Sbjct: 61  GETRDQL-ADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGR-LDVLVNNAGLGGQTPVV 118

Query: 125 -LSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF 183
            ++ +  +             T   L   +         G IVN +S         G R 
Sbjct: 119 DMTDEEWDRVLNVTLTSVMRATRAALRYFR----GVDHGGVIVNNASVL-------GWR- 166

Query: 184 DKINDESAYNSFGAYGQ-----SKLANIL----HAKELAKHLKEDGVNITANSLHPGSIV 234
                         + Q     +K   +      A E  +        +  N++ P    
Sbjct: 167 ------------AQHSQSHYAAAKAGVMALTRCSAIEAVEF------GVRINAVSPSIAR 208

Query: 235 T 235
            
Sbjct: 209 H 209

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score = 93.8 bits (234), Expect = 1e-22
 Identities = 56/217 (25%), Positives = 88/217 (40%), Gaps = 27/217 (12%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
              T IVTG + GIG    R +A  G +V +  R+ A   +V E + KE    K  A + 
Sbjct: 13  VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQC 71

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGHFLLT 145
           DVS+   V K   + ++   P++ LI NAG+ +  P   L+ ++    +  N  G F   
Sbjct: 72  DVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTC 131

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
             +     +      ++G IV  SS + +      +       +  YNS      SK A 
Sbjct: 132 RAVAKLWLQKQ----QKGSIVVTSSMSSQIINQSSLNGSLT--QVFYNS------SK-AA 178

Query: 206 ILH-----AKELAKHLKEDGVNITANSLHPGSIVTNL 237
             +     A E A         I  N+L PG + T+ 
Sbjct: 179 CSNLVKGLAAEWASA------GIRVNALSPGYVNTDQ 209

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 96.6 bits (241), Expect = 1e-22
 Identities = 63/223 (28%), Positives = 91/223 (40%), Gaps = 54/223 (24%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G  A+VTGA+ GIG   A V A  G  V+    + AA     E + +        A+ L
Sbjct: 212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-----EDLKRVADKVGGTALTL 266

Query: 88  DVSSLASVRKFASEYNSQ-GRPLNILINNAGIMASPFMLSKDNI-----ELQF----ATN 137
           DV++  +V K  +      G  ++IL+NNAGI       ++D +     E ++    A N
Sbjct: 267 DVTADDAVDKITAHVTEHHGGKVDILVNNAGI-------TRDKLLANMDEKRWDAVIAVN 319

Query: 138 HLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGA 197
            L    LT  L+             GR++ +SS A       GI              G 
Sbjct: 320 LLAPQRLTEGLVGNGTI-----GEGGRVIGLSSMA-------GIA-------------GN 354

Query: 198 YGQ-----SKLANILHAKELAKHLKEDGVNITANSLHPGSIVT 235
            GQ     +K   I  A+ LA  L + G  IT N++ PG I T
Sbjct: 355 RGQTNYATTKAGMIGLAEALAPVLADKG--ITINAVAPGFIET 395

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 93.7 bits (234), Expect = 1e-22
 Identities = 51/229 (22%), Positives = 87/229 (37%), Gaps = 63/229 (27%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAM 85
           +   A VTG   GIGT   + L   G  V+            R   +++  +      A 
Sbjct: 12  SQRIAYVTGGMGGIGTSICQRLHKDGFRVVA---GCGPNSPRRVKWLEDQKALGFDFYAS 68

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNI-----ELQF----AT 136
           E +V    S ++   +  ++   +++L+NNAGI       ++D +        +     T
Sbjct: 69  EGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGI-------TRDVVFRKMTREDWQAVIDT 121

Query: 137 NHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFG 196
           N    F +T  ++D M +        GRI+N+SS               +N +      G
Sbjct: 122 NLTSLFNVTKQVIDGMVE-----RGWGRIINISS---------------VNGQK-----G 156

Query: 197 AYGQ-----SKLANIL-----HAKELAKHLKEDGVNITANSLHPGSIVT 235
            +GQ     +K A I       A+E+A         +T N++ PG I T
Sbjct: 157 QFGQTNYSTAK-AGIHGFTMSLAQEVATK------GVTVNTVSPGYIGT 198

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 93.2 bits (232), Expect = 1e-22
 Identities = 26/215 (12%), Positives = 65/215 (30%), Gaps = 35/215 (16%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
                +V G    +G+   +    R   V          ++   +++ ++  +  +  + 
Sbjct: 6   EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVV--ENEEASASVIVKMTDSFTEQADQ 63

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGHFLL 144
             + +  +             ++ ++  AG  A   +       N +L +  +     + 
Sbjct: 64  VTAEVGKLLGDQ--------KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTIS 115

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
           +HL    +K+        G +    ++A        I                YG +K A
Sbjct: 116 SHLATKHLKEG-------GLLTLAGAKAALDGTPGMI---------------GYGMAKGA 153

Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
                + LA           A ++ P ++ T + R
Sbjct: 154 VHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNR 188

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score = 93.3 bits (233), Expect = 2e-22
 Identities = 43/237 (18%), Positives = 82/237 (34%), Gaps = 27/237 (11%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
                I+TG SSG+G   A   A  G  V++  R     ++ +  I +     ++  +++
Sbjct: 5   KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF--PGQILTVQM 62

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGHFLLT 145
           DV +   ++K   + + +   ++ILINNA      P   LS +           G F  +
Sbjct: 63  DVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCS 122

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
             +         +   +G I+N+ +     A                        +K   
Sbjct: 123 QAIGKYWI----EKGIKGNIINMVATYAWDA-------------GPG--VIHSAAAKAGV 163

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQG 262
           +   K LA         I  N++ PG I          +      + K  ++++P G
Sbjct: 164 LAMTKTLAVEWGRK-YGIRVNAIAPGPIERTGGADKLWISE---EMAKRTIQSVPLG 216

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 93.1 bits (232), Expect = 2e-22
 Identities = 57/224 (25%), Positives = 86/224 (38%), Gaps = 43/224 (19%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
                IVTGASSG+G    R+LA  G  V+       AG    E    E+  A V     
Sbjct: 6   KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAG----EEPAAEL-GAAVRFRNA 60

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKD---NIELQFA----TNHLG 140
           DV++ A      +    +   ++ L+N AG      +L +     ++  FA     N +G
Sbjct: 61  DVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALD-SFARTVAVNLIG 119

Query: 141 HFLLTHLLLDTMKKTAQKSSRE-GRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFG--A 197
            F +  L  + M +    +  E G IVN +S A   A+ +G               G  A
Sbjct: 120 TFNMIRLAAEVMSQGEPDADGERGVIVNTASIA---AF-DG-------------QIGQAA 162

Query: 198 YGQSKLA----NILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
           Y  SK       +  A+ELA+        I   ++ PG   T +
Sbjct: 163 YAASKGGVAALTLPAARELARF------GIRVVTIAPGIFDTPM 200

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score = 93.4 bits (233), Expect = 2e-22
 Identities = 55/216 (25%), Positives = 82/216 (37%), Gaps = 36/216 (16%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G TA+VTGA SGIG   A   A  G HV+   R     K+V + I         +A+  
Sbjct: 30  AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADG--GGSAEAVVA 86

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGHFLLT 145
           D++ L      A E  +  R +++L+NNAGI   +P   +S          N    ++L+
Sbjct: 87  DLADLEGAANVAEELAATRR-VDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLS 145

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSK--L 203
                 M          GRIV ++S               +       +  AY  SK  +
Sbjct: 146 RSFGTAMLA-----HGSGRIVTIAS---------------MLSFQGGRNVAAYAASKHAV 185

Query: 204 ANI--LHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
             +    A E A         +  N+L PG +VT  
Sbjct: 186 VGLTRALASEWAGR------GVGVNALAPGYVVTAN 215

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score = 93.0 bits (232), Expect = 3e-22
 Identities = 57/258 (22%), Positives = 92/258 (35%), Gaps = 50/258 (19%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVI---------MAVRNMAAGKDVREAIVKEIP 78
            G  A +TGA+ G G   A  +A  G  +I           V    A  D     V+ + 
Sbjct: 10  EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVE 69

Query: 79  SA--KVDAMELDVSSLASVRKFASEYNSQ-GRPLNILINNAGIMA-SPFM-LSKDNIELQ 133
           +A  ++ A  +D      +RK   +  +  GR L+I++ NAG+ A   +  ++ ++    
Sbjct: 70  AANRRIVAAVVDTRDFDRLRKVVDDGVAALGR-LDIIVANAGVAAPQAWDDITPEDFRDV 128

Query: 134 FATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYN 193
              N  G +         + +      R G I+ +SS A       G++           
Sbjct: 129 MDINVTGTWNTVMAGAPRIIEGG----RGGSIILISSAA-------GMK--------MQP 169

Query: 194 SFGAYGQSK-----LANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFC 248
               Y  SK     LA    A EL KH      +I  NS+HPG + T +   + +     
Sbjct: 170 FMIHYTASKHAVTGLARAF-AAELGKH------SIRVNSVHPGPVNTPMGSGDMVTAVGQ 222

Query: 249 ----NTVGKLVLKNIPQG 262
               N     VL      
Sbjct: 223 AMETNPQLSHVLTPFLPD 240

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score = 92.2 bits (230), Expect = 5e-22
 Identities = 58/239 (24%), Positives = 93/239 (38%), Gaps = 46/239 (19%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVI---------MAVRNMAAGKDVREAIVKEIP 78
            G  A +TGA+ G G   A  LA  G  +I          +V    A  +  +   + + 
Sbjct: 14  QGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVE 73

Query: 79  SA--KVDAMELDVSSLASVRKFASEYNSQ-GRPLNILINNAGIMA-SPFM-LSKDNIELQ 133
               K     LDV   A++R+  ++   Q GR L++++ NAG+++      L+ +  +  
Sbjct: 74  DQGRKALTRVLDVRDDAALRELVADGMEQFGR-LDVVVANAGVLSWGRVWELTDEQWDTV 132

Query: 134 FATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYN 193
              N  G +      +  M +        G IV VSS A       G++        A  
Sbjct: 133 IGVNLTGTWRTLRATVPAMIEAG----NGGSIVVVSSSA-------GLK--------ATP 173

Query: 194 SFGAYGQSK-----LANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGF 247
             G Y  SK     L N L A EL ++       I  NS+HP S+ T +     ++  F
Sbjct: 174 GNGHYSASKHGLTALTNTL-AIELGEY------GIRVNSIHPYSVETPMIEPEAMMEIF 225

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 91.8 bits (229), Expect = 5e-22
 Identities = 55/227 (24%), Positives = 86/227 (37%), Gaps = 62/227 (27%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G TA+VTGA+ GIG   A  LA  G  VI++  N    K    +I       K  A+  
Sbjct: 5   AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI-----GKKARAIAA 59

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNI-----ELQF----ATNH 138
           D+S   SV+   +E  +    ++IL+NNA I                    +      N 
Sbjct: 60  DISDPGSVKALFAEIQALTGGIDILVNNASI-------VPFVAWDDVDLDHWRKIIDVNL 112

Query: 139 LGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAY 198
            G F++T    D M+     + + GR+++++S                         G  
Sbjct: 113 TGTFIVTRAGTDQMR----AAGKAGRVISIASNT-------FFA-------------GTP 148

Query: 199 GQ-----SKLANIL-----HAKELAKHLKEDGVNITANSLHPGSIVT 235
                  +K   ++      A EL K+      NITAN++ PG I +
Sbjct: 149 NMAAYVAAK-GGVIGFTRALATELGKY------NITANAVTPGLIES 188

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score = 92.2 bits (230), Expect = 5e-22
 Identities = 48/217 (22%), Positives = 79/217 (36%), Gaps = 34/217 (15%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G  A+VTG S G+G   A+ LA  G  V++A RN+    +  + + ++    +  A   
Sbjct: 20  RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRC 78

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGHFLLT 145
           DVS+   V+K       +   L+ ++N AGI    P      D        N  G + + 
Sbjct: 79  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVC 138

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
                 +++     S    I+N+ S        E              +  AY  SK   
Sbjct: 139 REAFSLLRE-----SDNPSIINIGS----LTVEEV----------TMPNISAYAASK-GG 178

Query: 206 ILH-----AKELAKHLKEDGVNITANSLHPGSIVTNL 237
           +       AKE  ++       I  N + PG   T +
Sbjct: 179 VASLTKALAKEWGRY------GIRVNVIAPGWYRTKM 209

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score = 92.3 bits (230), Expect = 7e-22
 Identities = 53/243 (21%), Positives = 81/243 (33%), Gaps = 50/243 (20%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMA------------VRNMAAGKDVREAIVK 75
            G  A VTGA+ G G   A  LA  G  +I                  A+  +       
Sbjct: 10  EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETAD 69

Query: 76  EIPSA--KVDAMELDVSSLASVRKFASEYNSQ-GRPLNILINNAGI--MASPFM-LSKDN 129
            +     ++   E+DV    +++        Q GR L+I++ NAGI          S+++
Sbjct: 70  LVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGR-LDIIVANAGIGNGGDTLDKTSEED 128

Query: 130 IELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDE 189
                  N  G +      +  M        R G I+  SS         G++       
Sbjct: 129 WTEMIDINLAGVWKTVKAGVPHMIAGG----RGGSIILTSSVG-------GLK------- 170

Query: 190 SAYNSFGAYGQSK-----LANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGIL 244
            AY   G Y  +K     L       EL +H       I  NS+HP  + T +    G  
Sbjct: 171 -AYPHTGHYVAAKHGVVGLMRAF-GVELGQH------MIRVNSVHPTHVKTPMLHNEGTF 222

Query: 245 RGF 247
           + F
Sbjct: 223 KMF 225

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 91.9 bits (229), Expect = 7e-22
 Identities = 54/229 (23%), Positives = 84/229 (36%), Gaps = 63/229 (27%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAM 85
               A VTG   G+G   +R L   G+ V +   + +   D     +     A     A 
Sbjct: 24  AKRVAFVTGGMGGLGAAISRRLHDAGMAVAV---SHSERNDHVSTWLMHERDAGRDFKAY 80

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNI-----ELQF----AT 136
            +DV+   S  + A +  +    +++LINNAGI       ++D       +  +     T
Sbjct: 81  AVDVADFESCERCAEKVLADFGKVDVLINNAGI-------TRDATFMKMTKGDWDAVMRT 133

Query: 137 NHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFG 196
           +    F +T   +  M +      R GRIVN+ S               +N        G
Sbjct: 134 DLDAMFNVTKQFIAGMVE-----RRFGRIVNIGS---------------VNGSR-----G 168

Query: 197 AYGQ-----SKLANIL-----HAKELAKHLKEDGVNITANSLHPGSIVT 235
           A+GQ     +K A I       A E AK        IT N++ PG + T
Sbjct: 169 AFGQANYASAK-AGIHGFTKTLALETAKR------GITVNTVSPGYLAT 210

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 90.8 bits (226), Expect = 2e-21
 Identities = 54/225 (24%), Positives = 85/225 (37%), Gaps = 45/225 (20%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           GL A++TG +SG+G  TA  L  +G   ++     + G    EA  K++          D
Sbjct: 12  GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGG----EAQAKKL-GNNCVFAPAD 66

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGI-MASPFMLSKDNIEL---QF----ATNHLG 140
           V+S   V+   +    +   +++ +N AGI +AS     K         F      N +G
Sbjct: 67  VTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMG 126

Query: 141 HFLLTHLLLDTMKKTAQKSSRE-GRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFG--A 197
            F +  L+   M +       + G I+N +S     A  EG               G  A
Sbjct: 127 TFNVIRLVAGEMGQNEPDQGGQRGVIINTAS----VAAFEG-------------QVGQAA 169

Query: 198 YGQSKLANILH-----AKELAKHLKEDGVNITANSLHPGSIVTNL 237
           Y  SK   I+      A++LA         I   ++ PG   T L
Sbjct: 170 YSASK-GGIVGMTLPIARDLAPI------GIRVMTIAPGLFGTPL 207

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 90.3 bits (225), Expect = 2e-21
 Identities = 47/227 (20%), Positives = 79/227 (34%), Gaps = 66/227 (29%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
                ++TGA+ GIG  T  + A  G  ++         ++  EA+           + +
Sbjct: 4   KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------GAHPVVM 56

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNI-----ELQF----ATNH 138
           DV+  ASV +  +E  +    L+ +++ AGI       ++DN         +      N 
Sbjct: 57  DVADPASVERGFAEALAHLGRLDGVVHYAGI-------TRDNFHWKMPLEDWELVLRVNL 109

Query: 139 LGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAY 198
            G FL+     + M++        G IV  +S  +                      G  
Sbjct: 110 TGSFLVAKAASEAMRE-----KNPGSIVLTASRVY---------------------LGNL 143

Query: 199 GQ-----SKLANIL-----HAKELAKHLKEDGVNITANSLHPGSIVT 235
           GQ     S  A ++      A EL +        I  N+L PG I T
Sbjct: 144 GQANYAASM-AGVVGLTRTLALELGRW------GIRVNTLAPGFIET 183

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 90.7 bits (226), Expect = 2e-21
 Identities = 57/224 (25%), Positives = 81/224 (36%), Gaps = 41/224 (18%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMA--------VRNMAAGKDVREAIVKEIPS 79
           TG  A +TGA+ G G   A  LA  G  +I          V    A  +   A VK +  
Sbjct: 12  TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVED 71

Query: 80  A--KVDAMELDVSSLASVRKFASEYNSQ-GRPLNILINNAGIMASPFMLSKDNIELQFAT 136
              ++ A + DV    S+         + GR L+I++ NAGI  +P     D        
Sbjct: 72  IGSRIVARQADVRDRESLSAALQAGLDELGR-LDIVVANAGI--APMSAGDDGWHDVIDV 128

Query: 137 NHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFG 196
           N  G +    + + T+ K        G IV +SS A       G+        SA     
Sbjct: 129 NLTGVYHTIKVAIPTLVKQG----TGGSIVLISSSA-------GLA----GVGSADPGSV 173

Query: 197 AYGQSK-----LANILHAKELAKHLKEDGVNITANSLHPGSIVT 235
            Y  +K     L  +  A  LA         I  NS+HP  + T
Sbjct: 174 GYVAAKHGVVGLMRVY-ANLLAGQ------MIRVNSIHPSGVET 210

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score = 90.3 bits (225), Expect = 3e-21
 Identities = 45/219 (20%), Positives = 78/219 (35%), Gaps = 37/219 (16%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G  A VTG+S GIG   A   A  G  V +   +  A +                A + 
Sbjct: 33  KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY--GVHSKAYKC 90

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGI-MASPFMLSKDNIEL---QFATNHLGHFL 143
           ++S   SV +  S+       +++ + NAG+       +  DN +      + +  G + 
Sbjct: 91  NISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYY 150

Query: 144 LTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKL 203
            +H +    KK        G ++  SS +       G   +    ++ YN+      +K 
Sbjct: 151 CSHNIGKIFKK--NGK---GSLIITSSIS-------GKIVNIPQLQAPYNT------AK- 191

Query: 204 ANILH-----AKELAKHLKEDGVNITANSLHPGSIVTNL 237
           A   H     A E A            N++ PG I T++
Sbjct: 192 AACTHLAKSLAIEWAPF-------ARVNTISPGYIDTDI 223

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 90.3 bits (225), Expect = 3e-21
 Identities = 49/176 (27%), Positives = 69/176 (39%), Gaps = 27/176 (15%)

Query: 6   RKGPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAA 65
                G   + T    +         AIVTGAS GIG   A  LA RG  VI      A 
Sbjct: 5   HHHHMGTLEAQTQGPGSMDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAG 64

Query: 66  GKDVREAIVKEIPSA--KVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPF 123
                E I      A  +     L+V+   +V         +   LN+L+NNAGI     
Sbjct: 65  A----EGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGI----- 115

Query: 124 MLSKDNI-----ELQF----ATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSS 170
             ++D +     + ++     TN    F L+  +L  M K     +R GRIVN++S
Sbjct: 116 --TQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMK-----ARGGRIVNITS 164

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 88.5 bits (220), Expect = 3e-21
 Identities = 32/222 (14%), Positives = 73/222 (32%), Gaps = 51/222 (22%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
             +  ++ GAS  +G+     L  +   VI A R+                      + +
Sbjct: 2   NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRH-------------------SGDVTV 41

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLGHFLLT 145
           D++++ S++K   +    G+ ++ +++  G    SP   L+ +   +  ++   G   L 
Sbjct: 42  DITNIDSIKKMYEQV---GK-VDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLV 97

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
            L +D++         +G     +         + I               +   +  A 
Sbjct: 98  LLGIDSLND-------KGSFTLTTGIMME----DPIVQ-----------GASAAMANGAV 135

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGF 247
              AK  A  +      I  N++ P  +  +  +      GF
Sbjct: 136 TAFAKSAAIEMPR---GIRINTVSPNVLEESWDKLEPFFEGF 174

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 89.5 bits (223), Expect = 4e-21
 Identities = 47/177 (26%), Positives = 71/177 (40%), Gaps = 26/177 (14%)

Query: 5   SRKGPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMA 64
           S       S           +  T   A+VTGAS GIG   A  LA  G  V +   N A
Sbjct: 4   SHHHHHHSSGLVPRGSHMTALPLTDRIALVTGASRGIGRAIALELAAAGAKVAV---NYA 60

Query: 65  AGKDVREAIVKEIPSA--KVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASP 122
           +     + +V  I +A  +  A++ DVS  + V    +    +   L++L+NNAGI    
Sbjct: 61  SSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGRLDVLVNNAGI---- 116

Query: 123 FMLSKDNI-----ELQF----ATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSS 170
              ++D +        +      N  G FL +      M K      R GRI+N++S
Sbjct: 117 ---TRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLK-----QRSGRIINIAS 165

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 89.9 bits (224), Expect = 5e-21
 Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 27/154 (17%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAM 85
               A+VTGA  GIG E A++LA    HVI   R   +     +++V EI S   +    
Sbjct: 43  ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSC----DSVVDEIKSFGYESSGY 98

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNI-----ELQF----AT 136
             DVS    + +  ++  ++ + ++IL+NNAGI       ++DN+       ++     T
Sbjct: 99  AGDVSKKEEISEVINKILTEHKNVDILVNNAGI-------TRDNLFLRMKNDEWEDVLRT 151

Query: 137 NHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSS 170
           N    F +T  +   M       +R GRI+N+SS
Sbjct: 152 NLNSLFYITQPISKRMIN-----NRYGRIINISS 180

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 89.1 bits (222), Expect = 5e-21
 Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 23/155 (14%)

Query: 25  IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDA 84
           +      A+VTGAS GIG E A  LA +G  V+    + A+ +    ++ ++    K   
Sbjct: 1   MSLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK--GFKARG 58

Query: 85  MELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQ---------FA 135
           + L++S + S++ F +E  ++   ++IL+NNAGI       ++DN+ ++           
Sbjct: 59  LVLNISDIESIQNFFAEIKAENLAIDILVNNAGI-------TRDNLMMRMSEDEWQSVIN 111

Query: 136 TNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSS 170
           TN    F ++   +  M K      R GRI+++ S
Sbjct: 112 TNLSSIFRMSKECVRGMMK-----KRWGRIISIGS 141

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 89.1 bits (222), Expect = 5e-21
 Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 26/154 (16%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAM 85
            G TAIVTG+S G+G   A  L   G ++++   N +      +A  +E  +A   V   
Sbjct: 4   KGKTAIVTGSSRGLGKAIAWKLGNMGANIVL---NGSPASTSLDATAEEFKAAGINVVVA 60

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNI-----ELQF----AT 136
           + DV +   V             ++IL+NNAGI       ++D +     E  +     T
Sbjct: 61  KGDVKNPEDVENMVKTAMDAFGRIDILVNNAGI-------TRDTLMLKMSEKDWDDVLNT 113

Query: 137 NHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSS 170
           N    +L T  +   M K      + G+I+N++S
Sbjct: 114 NLKSAYLCTKAVSKIMLK-----QKSGKIINITS 142

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 89.3 bits (222), Expect = 7e-21
 Identities = 57/216 (26%), Positives = 86/216 (39%), Gaps = 41/216 (18%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
             +VTGASSG G   A      G  VI   R   A  D+  A        + +A+ LDV+
Sbjct: 7   VWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY-----PDRAEAISLDVT 61

Query: 91  SLASVRK-FASEYNSQGRPLNILINNAG-IMASPF-MLSKDNIELQFATNHLGHFLLTHL 147
               +    A      GR +++L+NNAG      F   ++  +   F  +  G   LT  
Sbjct: 62  DGERIDVVAADVLARYGR-VDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRA 120

Query: 148 LLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANIL 207
           LL  M+   + S   G +VN+SS   + +++                F AY  +K     
Sbjct: 121 LLPQMR--ERGS---GSVVNISSFGGQLSFA---------------GFSAYSATK----- 155

Query: 208 HAKE-----LAKHLKEDGVNITANSLHPGSIVTNLF 238
            A E     LA  +   G+ +    + PG+  TNLF
Sbjct: 156 AALEQLSEGLADEVAPFGIKVLI--VEPGAFRTNLF 189

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 88.3 bits (220), Expect = 9e-21
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 26/152 (17%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G  A+VTGAS GIG   A +LA RG  VI    + +  + + + +           M L
Sbjct: 8   EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL-----GDNGKGMAL 62

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNI-----ELQF----ATNH 138
           +V++  S+         +   ++IL+NNAGI       ++DN+     E ++     TN 
Sbjct: 63  NVTNPESIEAVLKAITDEFGGVDILVNNAGI-------TRDNLLMRMKEEEWSDIMETNL 115

Query: 139 LGHFLLTHLLLDTMKKTAQKSSREGRIVNVSS 170
              F L+  +L  M K      R+GRI+NV S
Sbjct: 116 TSIFRLSKAVLRGMMK-----KRQGRIINVGS 142

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 88.4 bits (220), Expect = 1e-20
 Identities = 42/239 (17%), Positives = 73/239 (30%), Gaps = 39/239 (16%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
           TAIVT      G  +A  L+  G  V           D       E+ +      +L   
Sbjct: 3   TAIVTNVKHFGGMGSALRLSEAGHTVACH--------DESFKQKDELEAFAETYPQLKPM 54

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGIM--ASPFM-LSKDNIELQFATNHLGHFLLTHL 147
           S     +      S    +++L++N        P    + ++         +  F L + 
Sbjct: 55  SEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNA 114

Query: 148 LLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNS--FGAYGQSKLAN 205
           +   MKK      + G I+ ++S A  F   +          S Y S   GA   +    
Sbjct: 115 VASQMKK-----RKSGHIIFITS-ATPFGPWKE--------LSTYTSARAGACTLANAL- 159

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNT--VGKLVLKNIPQG 262
              +KEL ++      NI   ++ P  + +    Y      +         V K     
Sbjct: 160 ---SKELGEY------NIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQ 209

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 88.9 bits (221), Expect = 1e-20
 Identities = 52/250 (20%), Positives = 81/250 (32%), Gaps = 44/250 (17%)

Query: 8   GPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHV-IMAVRNMAAG 66
           G S      ++  V +G       A+VTGA+  IG   A  L   G  V I    +  A 
Sbjct: 2   GSSHHHHHHSSGLVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAA 61

Query: 67  KDVREAIVKEIPSAKVDAMELDVSS----LASVRKFASEYNSQGRPLNILINNAGI---- 118
             + + + KE         + D+++     AS  +  +         ++L+NNA      
Sbjct: 62  VSLADELNKERS-NTAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPT 120

Query: 119 ----MASPFMLSKDNIELQF----ATNHLGHFLLTHLLLDTMKKTAQK-SSREGRIVNVS 169
                      +   +E Q      TN +  FLLT       K T    +S    IVN+ 
Sbjct: 121 PLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLC 180

Query: 170 SEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANIL----HAKELAKHLKEDGVNITA 225
                              +    +F  Y   K A +      A ELA +       I  
Sbjct: 181 D---------------AMVDQPCMAFSLYNMGKHALVGLTQSAALELAPY------GIRV 219

Query: 226 NSLHPGSIVT 235
           N + PG  + 
Sbjct: 220 NGVAPGVSLL 229

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 87.5 bits (218), Expect = 2e-20
 Identities = 49/154 (31%), Positives = 73/154 (47%), Gaps = 26/154 (16%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAM 85
              +A+VTGAS GIG   A  LA  G +V +   N A  K+  EA+V+EI +      A+
Sbjct: 3   MTKSALVTGASRGIGRSIALQLAEEGYNVAV---NYAGSKEKAEAVVEEIKAKGVDSFAI 59

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNI-----ELQF----AT 136
           + +V+    V+    E  SQ   L++L+NNAGI       ++DN+     E ++     T
Sbjct: 60  QANVADADEVKAMIKEVVSQFGSLDVLVNNAGI-------TRDNLLMRMKEQEWDDVIDT 112

Query: 137 NHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSS 170
           N  G F         M +      R G I+N+SS
Sbjct: 113 NLKGVFNCIQKATPQMLR-----QRSGAIINLSS 141

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 87.5 bits (218), Expect = 2e-20
 Identities = 48/154 (31%), Positives = 71/154 (46%), Gaps = 26/154 (16%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAM 85
            G  A+VTGAS GIG   A  LA +G +V++   N A  +     +V EI        A+
Sbjct: 3   KGKVALVTGASRGIGRAIAIDLAKQGANVVV---NYAGNEQKANEVVDEIKKLGSDAIAV 59

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNI-----ELQF----AT 136
             DV++   V     +       ++IL+NNAG+       +KDN+     E ++     T
Sbjct: 60  RADVANAEDVTNMVKQTVDVFGQVDILVNNAGV-------TKDNLLMRMKEEEWDTVINT 112

Query: 137 NHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSS 170
           N  G FL T  +   M +      R GRIVN++S
Sbjct: 113 NLKGVFLCTKAVSRFMMR-----QRHGRIVNIAS 141

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 87.6 bits (218), Expect = 2e-20
 Identities = 43/229 (18%), Positives = 80/229 (34%), Gaps = 59/229 (25%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAM 85
               A++T  + G+G +    L  +G  V +      +     E + +       ++  +
Sbjct: 6   FVRHALITAGTKGLGKQVTEKLLAKGYSVTV---TYHSDTTAMETMKETYKDVEERLQFV 62

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNI-----ELQF----AT 136
           + DV+    + K   E  S    ++ LINNAG       + +        E ++      
Sbjct: 63  QADVTKKEDLHKIVEEAMSHFGKIDFLINNAG-----PYVFERKKLVDYEEDEWNEMIQG 117

Query: 137 NHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFG 196
           N    F L  L++  M+K        GRI+N                     + A ++ G
Sbjct: 118 NLTAVFHLLKLVVPVMRK-----QNFGRIINYGF------------------QGADSAPG 154

Query: 197 AYGQ-----SKLANIL-----HAKELAKHLKEDGVNITANSLHPGSIVT 235
              +     +K   ++      A E A++       ITAN + PG I+ 
Sbjct: 155 WIYRSAFAAAK-VGLVSLTKTVAYEEAEY------GITANMVCPGDIIG 196

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 88.5 bits (220), Expect = 3e-20
 Identities = 54/238 (22%), Positives = 93/238 (39%), Gaps = 45/238 (18%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVI--------MAVRNMAAGKDVREAIVKEIPS 79
            G  A +TGA+ G G   A  LA  G  ++          +       +  +  V+ +  
Sbjct: 45  QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEE 104

Query: 80  A--KVDAMELDVSSLASVRKFASEYNSQ-GRPLNILINNAGI--MASPFMLSKDNIELQF 134
              ++ A + DV  LAS++    E  ++ G  ++IL++N GI        L+        
Sbjct: 105 QGRRIIARQADVRDLASLQAVVDEALAEFGH-IDILVSNVGISNQGEVVSLTDQQWSDIL 163

Query: 135 ATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNS 194
            TN +G +     +L +M +      + G ++ VSS         G+R            
Sbjct: 164 QTNLIGAWHACRAVLPSMIERG----QGGSVIFVSSTV-------GLR--------GAPG 204

Query: 195 FGAYGQSK-----LANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGF 247
              Y  SK     L   L A E+ +H      NI  NS++PG++ T +     +L+ F
Sbjct: 205 QSHYAASKHGVQGLMLSL-ANEVGRH------NIRVNSVNPGAVNTEMALNEKLLKMF 255

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score = 87.6 bits (218), Expect = 3e-20
 Identities = 60/260 (23%), Positives = 93/260 (35%), Gaps = 52/260 (20%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVI--------MAVRNMAAGKDVREAIVKEIPS 79
            G TA++TG + G+G   A  LA  G  +           V    A  D     V  +  
Sbjct: 9   EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEK 68

Query: 80  A--KVDAMELDVSSLASVRKFASEYNSQ-GRPLNILINNAGIMA-SPFMLSKDNIELQF- 134
              +  + ++DV   A++  F +E     G  ++I I NAGI   +     +     Q+ 
Sbjct: 69  TGRRCISAKVDVKDRAALESFVAEAEDTLGG-IDIAITNAGISTIALLPEVESA---QWD 124

Query: 135 ---ATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESA 191
               TN  G F     +   M K        GRIV VSS         G          A
Sbjct: 125 EVIGTNLTGTFNTIAAVAPGMIK-----RNYGRIVTVSSML-------GHS--------A 164

Query: 192 YNSFGAYGQSK-----LANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRG 246
             +  +Y  SK     L     A +L  +       IT N++ PG+I T +   + +   
Sbjct: 165 NFAQASYVSSKWGVIGLTKCA-AHDLVGY------GITVNAVAPGNIETPMTHNDFVFGT 217

Query: 247 FCNTVGKLVLKNIPQGAATT 266
               + K  LK++    A+ 
Sbjct: 218 MRPDLEKPTLKDVESVFASL 237

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 86.8 bits (216), Expect = 3e-20
 Identities = 48/152 (31%), Positives = 70/152 (46%), Gaps = 22/152 (14%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G  ++VTG++ GIG   A  LA  G  VI+   +    K V E I  +    K   +E+
Sbjct: 6   QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKY-GVKAHGVEM 64

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNI-----ELQF----ATNH 138
           ++ S  S+ K   E  +    ++IL+NNAGI       ++D +      L +      N 
Sbjct: 65  NLLSEESINKAFEEIYNLVDGIDILVNNAGI-------TRDKLFLRMSLLDWEEVLKVNL 117

Query: 139 LGHFLLTHLLLDTMKKTAQKSSREGRIVNVSS 170
            G FL+T   L  M K      R GRIVN+SS
Sbjct: 118 TGTFLVTQNSLRKMIK-----QRWGRIVNISS 144

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score = 86.8 bits (216), Expect = 4e-20
 Identities = 49/221 (22%), Positives = 80/221 (36%), Gaps = 39/221 (17%)

Query: 28  TGLTAIVTGAS--SGIGTETARVLALRGVHVIMA-VRNMAAGKDVREAIVKEIPSAKVDA 84
            G   +VTGAS   G+G E AR  A  G  V +         ++  + + K     K  A
Sbjct: 19  KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYG-IKAKA 77

Query: 85  MELDVSSLASVRKFASEYNSQ-GRPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGH 141
            +  V S  S  K   +  +  G+ ++  I NAG    S  +  S +        +  G 
Sbjct: 78  YKCQVDSYESCEKLVKDVVADFGQ-IDAFIANAGATADSGILDGSVEAWNHVVQVDLNGT 136

Query: 142 FLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQS 201
           F     +    K+  + +   G +V  +S +       G   +   ++++YN       +
Sbjct: 137 FHCAKAVGHHFKE--RGT---GSLVITASMS-------GHIANFPQEQTSYNV------A 178

Query: 202 KLANILH-----AKELAKHLKEDGVNITANSLHPGSIVTNL 237
           K A  +H     A E              NS+ PG I T L
Sbjct: 179 K-AGCIHMARSLANEWRDF-------ARVNSISPGYIDTGL 211

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 86.4 bits (215), Expect = 4e-20
 Identities = 42/151 (27%), Positives = 63/151 (41%), Gaps = 26/151 (17%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAMELD 88
             +VTGAS GIG   A  L   G  V++   N A      E + K+I +   +      D
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLV---NYARSAKAAEEVSKQIEAYGGQAITFGGD 59

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNI-----ELQF----ATNHL 139
           VS  A V             +++++NNAGI       ++D +     + Q+      N  
Sbjct: 60  VSKEADVEAMMKTAIDAWGTIDVVVNNAGI-------TRDTLLIRMKKSQWDEVIDLNLT 112

Query: 140 GHFLLTHLLLDTMKKTAQKSSREGRIVNVSS 170
           G FL T      M K      R+GRI+N++S
Sbjct: 113 GVFLCTQAATKIMMK-----KRKGRIINIAS 138

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 85.6 bits (213), Expect = 7e-20
 Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 30/155 (19%)

Query: 25  IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDA 84
           ID TG T+++TGASSGIG+  AR+L   G  VI++  N    K +  A+           
Sbjct: 10  IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL-----KDNYTI 64

Query: 85  MELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQ---------FA 135
              ++++        S+ ++    L+IL+ NAGI       + D + ++           
Sbjct: 65  EVCNLANKEECSNLISKTSN----LDILVCNAGI-------TSDTLAIRMKDQDFDKVID 113

Query: 136 TNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSS 170
            N   +F+L    +  M +      R GRI+N+SS
Sbjct: 114 INLKANFILNREAIKKMIQ-----KRYGRIINISS 143

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 87.0 bits (216), Expect = 9e-20
 Identities = 57/225 (25%), Positives = 94/225 (41%), Gaps = 46/225 (20%)

Query: 22  TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVI-----MAVRNMAAGKDVREAIVKE 76
              +   G   +VTGA  G+G   A   A RG  V+        + +  G    + +V+E
Sbjct: 2   ASPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEE 61

Query: 77  IPSAKVDAMELDVSSLASVRK-FASEYNSQGRPLNILINNAGIM--ASPFMLSKDNIELQ 133
           I      A+  +  S+ +  K   +  ++ GR +++++NNAGI+   S   +S ++ ++ 
Sbjct: 62  IRRRGGKAV-ANYDSVEAGEKLVKTALDTFGR-IDVVVNNAGILRDRSFSRISDEDWDII 119

Query: 134 FATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYN 193
              +  G F +T    D MKK  Q     GRI+  +S +       GI          Y 
Sbjct: 120 QRVHLRGSFQVTRAAWDHMKK--QNY---GRIIMTASAS-------GI----------YG 157

Query: 194 SFG--AYGQSK-----LANILHAKELAKHLKEDGVNITANSLHPG 231
           +FG   Y  +K     LAN L   E  K+      NI  N++ P 
Sbjct: 158 NFGQANYSAAKLGLLGLANTL-VIEGRKN------NIHCNTIAPN 195

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 85.7 bits (213), Expect = 1e-19
 Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 26/155 (16%)

Query: 25  IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDA 84
              TG  A+VTGA+ GIG   AR    +G  V +        K++   +        V  
Sbjct: 23  FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL-----GKDVFV 77

Query: 85  MELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQ---------FA 135
              ++S   S+++ A     +   ++IL+NNAGI       ++D + ++          A
Sbjct: 78  FSANLSDRKSIKQLAEVAEREMEGIDILVNNAGI-------TRDGLFVRMQDQDWDDVLA 130

Query: 136 TNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSS 170
            N      LT  L+ +M +      R GRI+N++S
Sbjct: 131 VNLTAASTLTRELIHSMMR-----RRYGRIINITS 160

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 84.8 bits (211), Expect = 1e-19
 Identities = 34/152 (22%), Positives = 59/152 (38%), Gaps = 27/152 (17%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAM---EL 87
            A++TGAS GIG   A  LA  G  + +   +    ++  E + +E        +     
Sbjct: 3   KALITGASRGIGRAIALRLAEDGFALAI---HYGQNREKAEEVAEEARRRGSPLVAVLGA 59

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNI-----ELQF----ATNH 138
           ++    +      +       L+ L+NNAGI       ++D +     +  +      N 
Sbjct: 60  NLLEAEAATALVHQAAEVLGGLDTLVNNAGI-------TRDTLLVRMKDEDWEAVLEANL 112

Query: 139 LGHFLLTHLLLDTMKKTAQKSSREGRIVNVSS 170
              F  T   +  M K     +R GRIVN++S
Sbjct: 113 SAVFRTTREAVKLMMK-----ARFGRIVNITS 139

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 87.8 bits (218), Expect = 1e-19
 Identities = 59/223 (26%), Positives = 92/223 (41%), Gaps = 48/223 (21%)

Query: 25  IDGTGLTAIVTGASSGIGTETARVLALRGVHVI-----MAVRNMAAGKDVREAIVKEIPS 79
           +D      I+TGA  G+G   +   A  G  V+      A+          + +V EI  
Sbjct: 4   VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVK 63

Query: 80  AKVDAM--ELDVSSLASVRKFASEYNSQGRPLNILINNAGIM--ASPFMLSKDNIELQFA 135
               A+    +V     + + A +  + G  ++++INNAGI+  AS   +++ + +L   
Sbjct: 64  NGGVAVADYNNVLDGDKIVETAVK--NFGT-VHVIINNAGILRDASMKKMTEKDYKLVID 120

Query: 136 TNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSF 195
            +  G F +T       +K  QK    GRIVN SS A       G+          Y +F
Sbjct: 121 VHLNGAFAVTKAAWPYFQK--QKY---GRIVNTSSPA-------GL----------YGNF 158

Query: 196 G--AYGQSK-----LANILHAKELAKHLKEDGVNITANSLHPG 231
           G   Y  +K      A  L AKE AK+      NI AN++ P 
Sbjct: 159 GQANYASAKSALLGFAETL-AKEGAKY------NIKANAIAPL 194

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 69.7 bits (171), Expect = 2e-13
 Identities = 55/218 (25%), Positives = 86/218 (39%), Gaps = 54/218 (24%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
                ++TGA +G+G E A+  A  G  V+  V +           V EI +A  +A   
Sbjct: 321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVV--VNDFKDATKT----VDEIKAAGGEA--- 371

Query: 88  DVSSLASVRKFASEYNSQ-----GRPLNILINNAGIM--ASPFMLSKDNIELQFATNHLG 140
                  V K +           G  ++IL+NNAGI+   S   +SK   +     + +G
Sbjct: 372 -WPDQHDVAKDSEAIIKNVIDKYGT-IDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIG 429

Query: 141 HFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFG--AY 198
            F L+ L      +  ++    GRI+N++S +       GI          Y +FG   Y
Sbjct: 430 TFNLSRLAWPYFVE--KQF---GRIINITSTS-------GI----------YGNFGQANY 467

Query: 199 GQSK-----LANILHAKELAKHLKEDGVNITANSLHPG 231
             SK     L+  + A E AK+      NI  N + P 
Sbjct: 468 SSSKAGILGLSKTM-AIEGAKN------NIKVNIVAPH 498

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 85.0 bits (211), Expect = 2e-19
 Identities = 38/214 (17%), Positives = 61/214 (28%), Gaps = 29/214 (13%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGK-DVREAIVKEIPSAKVDAMELDV 89
              +TG++SGIG     +LA  G  VI   R  A  + D+     +E   A V      V
Sbjct: 3   VIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGGV 62

Query: 90  SSLASVRKFASEYNSQGRPLNILINNAGIM----ASPFMLSKDNIELQFATNHLGHFLLT 145
                         +    L + +N  G+          LS+           +      
Sbjct: 63  LDGLVCCAGVGVTAANSG-LVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPG 121

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
              L  ++         G        A +                   +  AY  SK A 
Sbjct: 122 AAELPMVEA-----MLAGDEARAIELAEQQG----------------QTHLAYAGSKYAV 160

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
              A+         G  +  N + PG++ T L +
Sbjct: 161 TCLARRNVVDWAGRG--VRLNVVAPGAVETPLLQ 192

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score = 85.3 bits (212), Expect = 2e-19
 Identities = 48/216 (22%), Positives = 74/216 (34%), Gaps = 33/216 (15%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMA--VRNMAAGKDVREAIVKEIPSAKVDAM 85
               A+VTG  SGIG   A   A  G  V +          + V+  I +     K   +
Sbjct: 48  KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEEC--GRKAVLL 105

Query: 86  ELDVSSLASVRKFASEYNSQ-GRPLNILINNAGI--MASPFM-LSKDNIELQFATNHLGH 141
             D+S  +  R    +     G  L+IL   AG          L+ +  +  FA N    
Sbjct: 106 PGDLSDESFARSLVHKAREALGG-LDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFAL 164

Query: 142 FLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQS 201
           F +T   +  +        +   I+  SS          +                Y  +
Sbjct: 165 FWITQEAIPLLP-------KGASIITTSSIQAYQPSPHLL---------------DYAAT 202

Query: 202 KLANILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
           K A + +++ LAK + E G  I  N + PG I T L
Sbjct: 203 KAAILNYSRGLAKQVAEKG--IRVNIVAPGPIWTAL 236

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 84.2 bits (209), Expect = 3e-19
 Identities = 56/226 (24%), Positives = 90/226 (39%), Gaps = 51/226 (22%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVR-EAIVKEIPSAKVDAMEL 87
              A+VTG +SG+G  T + L   G  V++         D+R E +V ++   +      
Sbjct: 9   DAVAVVTGGASGLGLATTKRLLDAGAQVVVL--------DIRGEDVVADL-GDRARFAAA 59

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNI--ELQFA----TNHLGH 141
           DV+  A+V        + G  L I++N AG   +  +LS+D +     F      N +G 
Sbjct: 60  DVTDEAAVASALDLAETMG-TLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGS 118

Query: 142 FLLTHLLLDTMKKTAQKSSRE---GRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFG-- 196
           F +  L  + + KT          G I+N +S A   A+ +G               G  
Sbjct: 119 FNVLRLAAERIAKTEPVGPNAEERGVIINTASVA---AF-DG-------------QIGQA 161

Query: 197 AYGQSKLANILH-----AKELAKHLKEDGVNITANSLHPGSIVTNL 237
           AY  SK   ++      A++LA H       I   ++ PG   T L
Sbjct: 162 AYSASK-GGVVGMTLPIARDLASH------RIRVMTIAPGLFDTPL 200

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 83.9 bits (208), Expect = 6e-19
 Identities = 39/250 (15%), Positives = 73/250 (29%), Gaps = 67/250 (26%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA---KVDA 84
           T   A+VTGA+  +G   A  L   G  V +   +         A+   + +        
Sbjct: 8   TVPVALVTGAAKRLGRSIAEGLHAEGYAVCL---HYHRSAAEANALSATLNARRPNSAIT 64

Query: 85  MELDVSSLASVRKFASEYNSQGR-----------------PLNILINNAGIMA-SPFMLS 126
           ++ D+S++A+     ++ ++                      ++L+NNA     +P + +
Sbjct: 65  VQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRN 124

Query: 127 KD---------------NIELQFATNHLGHFLLTHLLLDTMKKTAQKS-SREGRIVNVSS 170
            +                    F +N +  + L       +  T  K       I+N+  
Sbjct: 125 DEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVD 184

Query: 171 EAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI-----LHAKELAKHLKEDGVNITA 225
                                   +  Y  +K A         A ELA         I  
Sbjct: 185 ---------------AMTNQPLLGYTIYTMAKGALEGLTRSA-ALELAPL------QIRV 222

Query: 226 NSLHPGSIVT 235
           N + PG  V 
Sbjct: 223 NGVGPGLSVL 232

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 84.0 bits (208), Expect = 1e-18
 Identities = 52/223 (23%), Positives = 85/223 (38%), Gaps = 44/223 (19%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVI---MAVRNMAAGKDVREA---IVKEIPSAK 81
            G   IVTGA  GIG   A   A  G  V+   + V    +      A   +V EI +A 
Sbjct: 26  DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAG 85

Query: 82  VDAM--ELDVSSLASVRK-FASEYNSQGRPLNILINNAGIM--ASPFMLSKDNIELQFAT 136
            +A+    +V+          +   + G  L++L+NNAGI+        S++  +   A 
Sbjct: 86  GEAVADGSNVADWDQAAGLIQTAVETFGG-LDVLVNNAGIVRDRMIANTSEEEFDAVIAV 144

Query: 137 NHLGHFLLTHLLLDTMKKTAQKSS-REGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSF 195
           +  GHF          +  ++     +GRI+N SS A       G+            S 
Sbjct: 145 HLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGA-------GL----------QGSV 187

Query: 196 G--AYGQSK-----LANILHAKELAKHLKEDGVNITANSLHPG 231
           G   Y  +K     L  +  A E+ ++       +T N++ P 
Sbjct: 188 GQGNYSAAKAGIATLTLVG-AAEMGRY------GVTVNAIAPS 223

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 81.4 bits (202), Expect = 3e-18
 Identities = 50/222 (22%), Positives = 84/222 (37%), Gaps = 61/222 (27%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
              + +VTG + GIG   A+ LA  G  V +  R   A                +  +E+
Sbjct: 14  VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP-------------KGLFGVEV 60

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNI-----ELQF----ATNH 138
           DV+   +V +  +       P+ +L++NAG+       S D       E +F      N 
Sbjct: 61  DVTDSDAVDRAFTAVEEHQGPVEVLVSNAGL-------SADAFLMRMTEEKFEKVINANL 113

Query: 139 LGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAY 198
            G F +      +M++     ++ GR++ + S +       G+              G  
Sbjct: 114 TGAFRVAQRASRSMQR-----NKFGRMIFIGSVS-------GLW-------------GIG 148

Query: 199 GQ-----SKLANILHAKELAKHLKEDGVNITANSLHPGSIVT 235
            Q     SK   I  A+ +A+ L     N+TAN + PG I T
Sbjct: 149 NQANYAASKAGVIGMARSIAREL--SKANVTANVVAPGYIDT 188

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 82.5 bits (204), Expect = 3e-18
 Identities = 39/250 (15%), Positives = 73/250 (29%), Gaps = 67/250 (26%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA---KVDA 84
           T   A+VTGA+  +G   A  L   G  V +   +         A+   + +        
Sbjct: 45  TVPVALVTGAAKRLGRSIAEGLHAEGYAVCL---HYHRSAAEANALSATLNARRPNSAIT 101

Query: 85  MELDVSSLASVRKFASEYNSQGR-----------------PLNILINNAGIMA-SPFMLS 126
           ++ D+S++A+     ++ ++                      ++L+NNA     +P + +
Sbjct: 102 VQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRN 161

Query: 127 KD---------------NIELQFATNHLGHFLLTHLLLDTMKKTAQKS-SREGRIVNVSS 170
            +                    F +N +  + L       +  T  K       I+N+  
Sbjct: 162 DEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVD 221

Query: 171 EAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI-----LHAKELAKHLKEDGVNITA 225
                                   +  Y  +K A         A ELA         I  
Sbjct: 222 ---------------AMTNQPLLGYTIYTMAKGALEGLTRSA-ALELAPL------QIRV 259

Query: 226 NSLHPGSIVT 235
           N + PG  V 
Sbjct: 260 NGVGPGLSVL 269

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score = 81.0 bits (201), Expect = 3e-18
 Identities = 45/214 (21%), Positives = 69/214 (32%), Gaps = 43/214 (20%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
            A+VTG S GIG   A  L  RG  V +A RN         A+           +  D+ 
Sbjct: 4   KALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLGAV----------PLPTDLE 53

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLGHFLLTHLL 148
                +            L++L++ A +    P + LS +        +    FLL    
Sbjct: 54  K-DDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAA 112

Query: 149 LDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILH 208
              M +     +  GR++ + S                    AY +      +K   +L 
Sbjct: 113 APHMAE-----AGWGRVLFIGSVT-------TFTAGGPVPIPAYTT------AK-TALLG 153

Query: 209 -----AKELAKHLKEDGVNITANSLHPGSIVTNL 237
                AKE A+        I  N L PG + T  
Sbjct: 154 LTRALAKEWARL------GIRVNLLCPGYVETEF 181

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 80.7 bits (200), Expect = 5e-18
 Identities = 53/222 (23%), Positives = 82/222 (36%), Gaps = 61/222 (27%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
              + +VTG + GIG   AR  A  G  V +  R+                     A++ 
Sbjct: 20  MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP-------------EGFLAVKC 66

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNI-----ELQF----ATNH 138
           D++    V +   E      P+ +LI NAG+       +KD +     E  F     TN 
Sbjct: 67  DITDTEQVEQAYKEIEETHGPVEVLIANAGV-------TKDQLLMRMSEEDFTSVVETNL 119

Query: 139 LGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAY 198
            G F +       M +     +++GR+V +SS         G+              G+ 
Sbjct: 120 TGTFRVVKRANRAMLR-----AKKGRVVLISSVV-------GLL-------------GSA 154

Query: 199 GQ-----SKLANILHAKELAKHLKEDGVNITANSLHPGSIVT 235
           GQ     SK   +  A+ LA+ L     NIT N + PG + T
Sbjct: 155 GQANYAASKAGLVGFARSLAREL--GSRNITFNVVAPGFVDT 194

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 80.3 bits (199), Expect = 5e-18
 Identities = 51/216 (23%), Positives = 81/216 (37%), Gaps = 43/216 (19%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
           +A+VTG +SG+G   A  L  RG  V++                       +  +E DV+
Sbjct: 4   SALVTGGASGLGRAAALALKARGYRVVVLDLRREGE--------------DLIYVEGDVT 49

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDN------IELQFATNHLGHFLL 144
               VR+  +    +  PL  +++ AG+  +  +L K+              N LG F +
Sbjct: 50  REEDVRRAVARAQEEA-PLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNV 108

Query: 145 THLLLDTMKKTAQKSSRE-GRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFG--AYGQS 201
             L    M++    +  + G IVN +S A   A+ EG               G  AY  S
Sbjct: 109 LRLAAWAMRENPPDAEGQRGVIVNTASVA---AF-EG-------------QIGQAAYAAS 151

Query: 202 KLANILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
           K   +      A+ L   G  I   ++ PG   T L
Sbjct: 152 KGGVVALTLPAARELAGWG--IRVVTVAPGLFDTPL 185

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 79.8 bits (197), Expect = 8e-17
 Identities = 64/223 (28%), Positives = 95/223 (42%), Gaps = 48/223 (21%)

Query: 25  IDGTGLTAIVTGASSGIGTETARVLALRGVHVIM-----AVRNMAAGKDVREAIVKEIPS 79
           +   G  A+VTGA +G+G E A + A RG  V++           A +   + +V EI  
Sbjct: 15  LRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRK 74

Query: 80  AKVDAM--ELDVSSLASVRKFASEYNSQGRPLNILINNAGIM--ASPFMLSKDNIELQFA 135
           A  +A+     V   A V + A +  + GR ++IL+NNAGI+   S    S+ +  L   
Sbjct: 75  AGGEAVADYNSVIDGAKVIETAIK--AFGR-VDILVNNAGILRDRSLVKTSEQDWNLVND 131

Query: 136 TNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSF 195
            +  G F  T      MKK  Q     GRI+  SS +       GI          Y +F
Sbjct: 132 VHLKGSFKCTQAAFPYMKK--QNY---GRIIMTSSNS-------GI----------YGNF 169

Query: 196 G--AYGQSK-----LANILHAKELAKHLKEDGVNITANSLHPG 231
           G   Y  +K     LAN + A E A++      N+  N + P 
Sbjct: 170 GQVNYTAAKMGLIGLANTV-AIEGARN------NVLCNVIVPT 205

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 77.2 bits (191), Expect = 1e-16
 Identities = 50/218 (22%), Positives = 82/218 (37%), Gaps = 38/218 (17%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMA-VRNMAAGKDVREAIVKEIPSAKVDAME 86
            G   ++TG  SGIG   +   A  G ++ +A +       + ++ + KE    K   + 
Sbjct: 46  KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKE--GVKCVLLP 103

Query: 87  LDVSSLASVRKFASEYNSQ-GRPLNILINNAGI--MASPFM-LSKDNIELQFATNHLGHF 142
            D+S     +    E   Q G  LNIL+NN            ++ + +E  F  N   +F
Sbjct: 104 GDLSDEQHCKDIVQETVRQLGS-LNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYF 162

Query: 143 LLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFG---AYG 199
            +T   L  +K       +   I+N +S               I    AY        Y 
Sbjct: 163 HVTKAALSHLK-------QGDVIINTAS---------------IV---AYEGNETLIDYS 197

Query: 200 QSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
            +K A +   + L++ L + G  I  N + PG I T L
Sbjct: 198 ATKGAIVAFTRSLSQSLVQKG--IRVNGVAPGPIWTPL 233

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 63.7 bits (155), Expect = 8e-12
 Identities = 18/127 (14%), Positives = 42/127 (33%), Gaps = 16/127 (12%)

Query: 9   PSGFSASSTA----EEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMA 64
            +G + ++ A         G    G  A+V   +  +G  +A +LA  G  V++  R + 
Sbjct: 95  SNGSNTTAAAGVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLD 154

Query: 65  AGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFM 124
             +   +++ K        A   + +  AS  +            + +           +
Sbjct: 155 KAQAAADSVNKRFKVNVTAA---ETADDASRAEAVKG-------AHFVFTAGA--IGLEL 202

Query: 125 LSKDNIE 131
           L +   +
Sbjct: 203 LPQAAWQ 209

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 48.8 bits (117), Expect = 9e-07
 Identities = 29/218 (13%), Positives = 65/218 (29%), Gaps = 51/218 (23%)

Query: 26  DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAM 85
            G  +   V GA+  +G   AR +   G  +++  R  +         ++ +   + +  
Sbjct: 10  PGAHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQ--------IQRLAYLEPECR 61

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGI-----MASPFMLSKDNIELQFATNHLG 140
             ++   A + +                   G+      A  +       + + A+    
Sbjct: 62  VAEMLDHAGLERAL----------------RGLDGVIFSAGYYPSRPRRWQEEVASALGQ 105

Query: 141 HFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSF----G 196
               T+       +         RI+ V S     A     +    ++   Y+S      
Sbjct: 106 ----TNPFYAACLQARVP-----RILYVGSAY---AMPRHPQGLPGHEGLFYDSLPSGKS 153

Query: 197 AYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIV 234
           +Y   K A      E A+    +G+ +      PG ++
Sbjct: 154 SYVLCKWA----LDEQAREQARNGLPVVI--GIPGMVL 185

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 44.7 bits (106), Expect = 2e-05
 Identities = 34/171 (19%), Positives = 60/171 (35%), Gaps = 18/171 (10%)

Query: 34  VTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLA 93
           + GA+  +G +  + L   G      V       DV +       S  VDA   D+S+  
Sbjct: 19  IIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLI-DVFQPEAPAGFSGAVDARAADLSAPG 77

Query: 94  SVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMK 153
              K            +++ + A I++     ++ + +  +  N  G    T  L D ++
Sbjct: 78  EAEKLVEA------RPDVIFHLAAIVSGE---AELDFDKGYRINLDG----TRYLFDAIR 124

Query: 154 KTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
               K   + R+V  SS A    +   +    I DE       +YG  K  
Sbjct: 125 IANGKDGYKPRVVFTSSIA---VFGAPLP-YPIPDEFHTTPLTSYGTQKAI 171

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 40.4 bits (95), Expect = 4e-04
 Identities = 30/173 (17%), Positives = 68/173 (39%), Gaps = 31/173 (17%)

Query: 33  IVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSL 92
           +VTG+S  IGTE    LA +     +   ++                  +  + LDVS+ 
Sbjct: 3   LVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT-----------GGIKFITLDVSNR 51

Query: 93  ASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTM 152
             + +   +Y+     ++ + + AGI+++     + +  L +  N  G    T+ +L+  
Sbjct: 52  DEIDRAVEKYS-----IDAIFHLAGILSAK---GEKDPALAYKVNMNG----TYNILEAA 99

Query: 153 KKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
           K+   +     ++V  S+      +      +K+   +       +G +K+A 
Sbjct: 100 KQHRVE-----KVVIPSTIG---VFGPETPKNKVPSITITRPRTMFGVTKIAA 144

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	313
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	100.0
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	100.0
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	100.0
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.98
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.98
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.97
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.97
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.96
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.96
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.95
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.94
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.94
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.94
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.93
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.93
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.92
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.92
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.91
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.91
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.91
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.91
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.91
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.91
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.91
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.9
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.9
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.9
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.9
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.9
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.89
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.89
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.89
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.89
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.89
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.89
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.88
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.88
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.88
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.88
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.88
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.88
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.88
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.87
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.87
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.87
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.87
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.87
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.87
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.87
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.86
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.86
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.86
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.86
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.86
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.86
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.86
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.86
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.85
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.85
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.85
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.85
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.85
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.85
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.84
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.84
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.84
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.84
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.84
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.83
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.83
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.83
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.83
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.82
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.82
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.82
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.82
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.81
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.81
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.8
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.8
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.8
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.79
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.79
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.79
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.77
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.76
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.75
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.73
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.72
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.69
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.67
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.67
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.66
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.66
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.65
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.63
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.62
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.61
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.57
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.55
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.5
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.46
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.43
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.37
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.24
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.1
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.9
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.86
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.81
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.79
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.78
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.66
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.64
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.64
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.62
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.59
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.58
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.58
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.54
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.52
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.51
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.41
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.39
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.39
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.37
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.34
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.33
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.32
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.32
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.31
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.29
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.29
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.26
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.26
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.26
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.21
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.2
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.15
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.13
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.13
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	98.1
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	98.08
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.08
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	98.07
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	98.05
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.04
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	98.02
3gms_A	340	Putative NADPH:quinone reductase; structural genom	98.01
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	98.01
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.98
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.97
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.96
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.95
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.93
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.91
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.9
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.88
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.86
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.81
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.81
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.75
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.72
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.71
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.7
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.69
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.68
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.67
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.66
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.66
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.61
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.61
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.6
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.59
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.59
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.58
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.54
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.5
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.49
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.48
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.48
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	97.47
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.47
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.45
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.42
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.38
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.37
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.37
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	97.32
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.32
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.31
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.3
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.29
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	97.29
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.28
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	97.26
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.26
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.25
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.22
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.22
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	97.21
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.21
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	97.2
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.18
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	97.16
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.15
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	97.15
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.09
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.09
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.09
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	97.08
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.08
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.08
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.07
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.06
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	97.06
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	97.03
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	97.02
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.01
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.99
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.97
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	96.96
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.94
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	96.94
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.93
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.86
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	96.82
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	96.78
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	96.75
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.74
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.73
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.73
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.7
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.68
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.67
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.63
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.63
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.63
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.62
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	96.62
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	96.58
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	96.58
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	96.58
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.56
1tt5_B	434	Ubiquitin-activating enzyme E1C isoform 1; cell cy	96.52
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	96.5
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.49
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	96.48
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	96.47
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	96.47
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.46
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.44
1y8q_B	640	Anthracycline-, ubiquitin-like 2 activating enzyme	96.43
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.41
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.37
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.36
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.35
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.33
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	96.31
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.28
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	96.27
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	96.23
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	96.16
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.16
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.11
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.09
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.08
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	96.06
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.06
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.05
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	96.05
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	96.04
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	96.03
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	96.03
3aoe_E	419	Glutamate dehydrogenase; rossmann fold, NADH, oxid	96.01
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	96.01
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.01
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.0
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	95.98
1u8x_X	472	Maltose-6'-phosphate glucosidase; structural genom	95.98
3l07_A	285	Bifunctional protein fold; structural genomics, ID	95.98
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	95.96
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	95.95
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	95.95
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	95.92
1obb_A	480	Maltase, alpha-glucosidase; glycosidase, sulfinic	95.9
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	95.88
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	95.87

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=2.7e-55  Score=385.78  Aligned_cols=245  Identities=21%  Similarity=0.244  Sum_probs=222.7

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      ...|+|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +.++.++++|++|++++++++++
T Consensus         2 s~~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~--g~~~~~~~~Dv~~~~~v~~~~~~   79 (255)
T 4g81_D            2 TALFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK--GYDAHGVAFDVTDELAIEAAFSK   79 (255)
T ss_dssp             -CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT--TCCEEECCCCTTCHHHHHHHHHH
T ss_pred             CCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHH
Confidence            3457999999999999999999999999999999999999999999999999876  56899999999999999999999


Q ss_pred             HhhcCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccC
Q 021391          102 YNSQGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSE  179 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~  179 (313)
                      +.+++|+||+||||||+.... . +.+.++|++.+++|+.++|+++|+++|+|.++    +.+|+||++||.++..+.| 
T Consensus        80 ~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~----~~~G~IVnisS~~~~~~~~-  154 (255)
T 4g81_D           80 LDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIAR----NSGGKIINIGSLTSQAARP-  154 (255)
T ss_dssp             HHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCCEEEEEECCGGGTSBCT-
T ss_pred             HHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc----cCCCEEEEEeehhhcCCCC-
Confidence            999999999999999987653 3 88999999999999999999999999999763    4579999999999998877 


Q ss_pred             CCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----chhHhHHHHHHHhh
Q 021391          180 GIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----GILRGFCNTVGKLV  255 (313)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~~~~  255 (313)
                                    ...+|++||+|+.+|+|++|.|++++|  ||||+|+||+++|++....    .+...+.+..|.+|
T Consensus       155 --------------~~~~Y~asKaal~~ltr~lA~ela~~g--IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R  218 (255)
T 4g81_D          155 --------------TVAPYTAAKGGIKMLTCSMAAEWAQFN--IQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQR  218 (255)
T ss_dssp             --------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCS
T ss_pred             --------------CchhHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCC
Confidence                          778999999999999999999999999  9999999999999987643    23344566778889


Q ss_pred             cCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          256 LKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       256 ~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      ..+|+|+|+.++||+| +.++|+||+.|.+||++.
T Consensus       219 ~g~pediA~~v~fL~S-~~a~~iTG~~i~VDGG~~  252 (255)
T 4g81_D          219 WGRPEELIGTAIFLSS-KASDYINGQIIYVDGGWL  252 (255)
T ss_dssp             CBCGGGGHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             CcCHHHHHHHHHHHhC-chhCCCcCCEEEECCCeE
Confidence            9999999999999998 899999999999988753

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=9e-55  Score=382.22  Aligned_cols=241  Identities=24%  Similarity=0.225  Sum_probs=216.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++...  +.++.++++|++|+++++++++++.+
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~~   80 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM--GKEVLGVKADVSKKKDVEEFVRRTFE   80 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999999999999999776  56899999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCC--CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          105 QGRPLNILINNAGIMAS--PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      ++|+||+||||||+...  +. +.+.++|++.+++|+.++|+++|+++|+|.++     ++|+||++||.++..+.+   
T Consensus        81 ~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-----~~G~IVnisS~~g~~~~~---  152 (254)
T 4fn4_A           81 TYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQ-----GKGVIVNTASIAGIRGGF---  152 (254)
T ss_dssp             HHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTCSSS---
T ss_pred             HcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEEechhhcCCCC---
Confidence            99999999999997643  33 78999999999999999999999999999984     479999999999998877   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc-----hhHhHHHH-HHHhh
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG-----ILRGFCNT-VGKLV  255 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~-----~~~~~~~~-~~~~~  255 (313)
                                  ...+|++||+|+.+|+|+||.|++++|  ||||+|+||+++|++.....     ..+...+. .+.+|
T Consensus       153 ------------~~~~Y~asKaal~~ltr~lA~ela~~g--IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R  218 (254)
T 4fn4_A          153 ------------AGAPYTVAKHGLIGLTRSIAAHYGDQG--IRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSR  218 (254)
T ss_dssp             ------------SCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCC
T ss_pred             ------------CChHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCC
Confidence                        678999999999999999999999999  99999999999999865431     11222222 24467


Q ss_pred             cCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          256 LKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       256 ~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      ..+|+|+|++++||+| +.++|+||+.|.+||+..
T Consensus       219 ~g~pediA~~v~fLaS-d~a~~iTG~~i~VDGG~t  252 (254)
T 4fn4_A          219 LAEPEDIANVIVFLAS-DEASFVNGDAVVVDGGLT  252 (254)
T ss_dssp             CBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             CcCHHHHHHHHHHHhC-chhcCCcCCEEEeCCCcc
Confidence            8899999999999998 899999999999988753

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=8.1e-53  Score=371.28  Aligned_cols=242  Identities=22%  Similarity=0.301  Sum_probs=212.1

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      ++|+|+||++|||||++|||+++|++|+++|++|++++|+.++.+ ..+++.+.  +.++.++++|++|+++++++++++
T Consensus         1 M~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~v~~~   77 (258)
T 4gkb_A            1 MDLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQR--QPRATYLPVELQDDAQCRDAVAQT   77 (258)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHH--CTTCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhc--CCCEEEEEeecCCHHHHHHHHHHH
Confidence            468999999999999999999999999999999999999987754 34556655  567899999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCCC-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          103 NSQGRPLNILINNAGIMASP-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      .+++|+||+||||||+.... .+.+.++|++.+++|+.++++++|+++|+|++.      +|+||++||.++..+.|   
T Consensus        78 ~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~------~G~IVnisS~~~~~~~~---  148 (258)
T 4gkb_A           78 IATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT------RGAIVNISSKTAVTGQG---  148 (258)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCTHHHHCCS---
T ss_pred             HHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc------CCeEEEEeehhhccCCC---
Confidence            99999999999999987543 488899999999999999999999999999763      69999999999998877   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--------chhHhHHHHHHH
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--------GILRGFCNTVGK  253 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--------~~~~~~~~~~~~  253 (313)
                                  ...+|++||+|+.+|+|++|.|++++|  ||||+|+||+|+|++....        .....+....|.
T Consensus       149 ------------~~~~Y~asKaav~~ltr~lA~ela~~g--IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl  214 (258)
T 4gkb_A          149 ------------NTSGYCASKGAQLALTREWAVALREHG--VRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPL  214 (258)
T ss_dssp             ------------SCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCCSCC-----------CHHHHHHTTCTT
T ss_pred             ------------CchHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCC
Confidence                        778999999999999999999999999  9999999999999997653        122333444455


Q ss_pred             -hhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          254 -LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       254 -~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                       +++.+|+|+|++++||+| +.++|+||+.|.+||++..
T Consensus       215 g~R~g~peeiA~~v~fLaS-~~a~~iTG~~i~VDGG~T~  252 (258)
T 4gkb_A          215 GRRFTTPDEIADTAVFLLS-PRASHTTGEWLFVDGGYTH  252 (258)
T ss_dssp             TTSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTTTT
T ss_pred             CCCCcCHHHHHHHHHHHhC-chhcCccCCeEEECCCcch
Confidence             478899999999999998 9999999999998887643

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=2.4e-53  Score=370.31  Aligned_cols=239  Identities=21%  Similarity=0.256  Sum_probs=208.8

Q ss_pred             hccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHH
Q 021391           21 VTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFAS  100 (313)
Q Consensus        21 ~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~  100 (313)
                      |.+.|+|+||++|||||++|||+++|+.|+++|++|++++|+..  ++..+++.+.  +.++.++++|++|+++++++++
T Consensus         1 M~n~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~~   76 (247)
T 4hp8_A            1 MKNPFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKD--GGNASALLIDFADPLAAKDSFT   76 (247)
T ss_dssp             --CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHT--TCCEEEEECCTTSTTTTTTSST
T ss_pred             CcCCcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHh--CCcEEEEEccCCCHHHHHHHHH
Confidence            34678999999999999999999999999999999999999864  3555666655  5689999999999998877653


Q ss_pred             HHhhcCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccccc
Q 021391          101 EYNSQGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYS  178 (313)
Q Consensus       101 ~~~~~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~  178 (313)
                           +|+||+||||||+.... . +.+.++|++.+++|+.++|+++|+++|+|.++    .++|+||++||..+..+.+
T Consensus        77 -----~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~----g~~G~IVnisS~~~~~g~~  147 (247)
T 4hp8_A           77 -----DAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAK----GRSGKVVNIASLLSFQGGI  147 (247)
T ss_dssp             -----TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCCEEEEEECCGGGTSCCS
T ss_pred             -----hCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHh----CCCcEEEEEechhhCCCCC
Confidence                 58999999999987653 3 88999999999999999999999999999874    3479999999999998877


Q ss_pred             CCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----chhHhHHHHHHHh
Q 021391          179 EGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----GILRGFCNTVGKL  254 (313)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~~~  254 (313)
                                     ...+|++||+|+.+|+|++|.|++++|  ||||+|+||+++|++....    ...+.+.+.+|.+
T Consensus       148 ---------------~~~~Y~asKaav~~ltr~lA~Ela~~g--IrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~Plg  210 (247)
T 4hp8_A          148 ---------------RVPSYTAAKHGVAGLTKLLANEWAAKG--INVNAIAPGYIETNNTEALRADAARNKAILERIPAG  210 (247)
T ss_dssp             ---------------SCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTS
T ss_pred             ---------------CChHHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCC
Confidence                           778999999999999999999999999  9999999999999997643    2234455667888


Q ss_pred             hcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          255 VLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       255 ~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      |+.+|+|+|++++||+| +.++|+||+.|.+||++.
T Consensus       211 R~g~peeiA~~v~fLaS-d~a~~iTG~~i~VDGG~~  245 (247)
T 4hp8_A          211 RWGHSEDIAGAAVFLSS-AAADYVHGAILNVDGGWL  245 (247)
T ss_dssp             SCBCTHHHHHHHHHHTS-GGGTTCCSCEEEESTTGG
T ss_pred             CCcCHHHHHHHHHHHhC-chhcCCcCCeEEECcccc
Confidence            99999999999999998 899999999999998764

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=3.9e-53  Score=375.36  Aligned_cols=234  Identities=22%  Similarity=0.267  Sum_probs=208.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      .|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++++|++|+++++++++++.++
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~-----g~~~~~~~~Dv~~~~~v~~~~~~~~~~  100 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI-----GGGAVGIQADSANLAELDRLYEKVKAE  100 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCCeEEEEecCCCHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999999999888887776     567889999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCC-CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          106 GRPLNILINNAGIMAS-PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~-~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      +|+||+||||||+... +. +.+.++|++.+++|+.++++++|+++|+|++       +|+||+++|.++..+.|     
T Consensus       101 ~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~-------~G~IInisS~~~~~~~~-----  168 (273)
T 4fgs_A          101 AGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR-------GSSVVLTGSTAGSTGTP-----  168 (273)
T ss_dssp             HSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-------EEEEEEECCGGGGSCCT-----
T ss_pred             cCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh-------CCeEEEEeehhhccCCC-----
Confidence            9999999999998654 33 8899999999999999999999999999965       68999999999998877     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc---------chhHhHHHHHHHh
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN---------GILRGFCNTVGKL  254 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~---------~~~~~~~~~~~~~  254 (313)
                                ...+|++||+|+.+|+|++|.|++++|  ||||+|+||+++|++....         .+...+...+|.+
T Consensus       169 ----------~~~~Y~asKaav~~ltr~lA~Ela~~g--IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~Plg  236 (273)
T 4fgs_A          169 ----------AFSVYAASKAALRSFARNWILDLKDRG--IRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMG  236 (273)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHTTTSC--EEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTS
T ss_pred             ----------CchHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCC
Confidence                      778999999999999999999999999  9999999999999986643         1223455667788


Q ss_pred             hcCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          255 VLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       255 ~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      |..+|+|+|++++||+| +.++|+||+.|.+||+.
T Consensus       237 R~g~peeiA~~v~FLaS-d~a~~iTG~~i~VDGG~  270 (273)
T 4fgs_A          237 RVGRAEEVAAAALFLAS-DDSSFVTGAELFVDGGS  270 (273)
T ss_dssp             SCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTT
T ss_pred             CCcCHHHHHHHHHHHhC-chhcCccCCeEeECcCh
Confidence            89999999999999998 89999999999988764

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=3.4e-52  Score=362.29  Aligned_cols=228  Identities=23%  Similarity=0.251  Sum_probs=201.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      ++||++|||||++|||+++|++|+++|++|++++|+.+.++..        .+.++..+++|++|+++++++++    ++
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~--------~~~~~~~~~~Dv~~~~~v~~~~~----~~   76 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP--------RHPRIRREELDITDSQRLQRLFE----AL   76 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC--------CCTTEEEEECCTTCHHHHHHHHH----HC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh--------hcCCeEEEEecCCCHHHHHHHHH----hc
Confidence            5899999999999999999999999999999999998765431        14578999999999999988876    47


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                      |+||+||||||+..+..+.+.++|++.+++|+.++++++|+++|+|++.      +|+||++||+++..+.+        
T Consensus        77 g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~------~G~IVnisS~~~~~~~~--------  142 (242)
T 4b79_A           77 PRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQR------GGSILNIASMYSTFGSA--------  142 (242)
T ss_dssp             SCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------CEEEEEECCGGGTSCCS--------
T ss_pred             CCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc------CCeEEEEeeccccCCCC--------
Confidence            9999999999987655588999999999999999999999999999763      69999999999998877        


Q ss_pred             CCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----chhHhHHHHHHHhhcCChHHH
Q 021391          187 NDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----GILRGFCNTVGKLVLKNIPQG  262 (313)
Q Consensus       187 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~ev  262 (313)
                             ...+|++||+|+.+|+|+||.|++++|  ||||+|+||+++||+....    +..+.+.+..|.+|..+|+|+
T Consensus       143 -------~~~~Y~asKaav~~ltr~lA~Ela~~g--IrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR~g~peei  213 (242)
T 4b79_A          143 -------DRPAYSASKGAIVQLTRSLACEYAAER--IRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEV  213 (242)
T ss_dssp             -------SCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCSCBCHHHH
T ss_pred             -------CCHHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCCCcCHHHH
Confidence                   778999999999999999999999999  9999999999999987653    234556667788899999999


Q ss_pred             HHHHHHHHccCCccCCCceeecCCcccC
Q 021391          263 AATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       263 a~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      |++++||+| |.++|+||+.|.+||++.
T Consensus       214 A~~v~fLaS-d~a~~iTG~~l~VDGG~l  240 (242)
T 4b79_A          214 ASAAAFLCG-PGASFVTGAVLAVDGGYL  240 (242)
T ss_dssp             HHHHHHHTS-GGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHhC-chhcCccCceEEECccHh
Confidence            999999998 899999999999988753

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=1.7e-50  Score=357.30  Aligned_cols=242  Identities=17%  Similarity=0.174  Sum_probs=215.7

Q ss_pred             CCCCCCCEEEEeCCCC--chHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHH
Q 021391           24 GIDGTGLTAIVTGASS--GIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        24 ~~~~~gk~~lItGas~--giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      +|+|+||++|||||+|  |||+++|++|+++|++|++++|+.+.++++.+.+.+.. +.++.++++|+++++++++++++
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~   79 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLN-QPEAHLYQIDVQSDEEVINGFEQ   79 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGT-CSSCEEEECCTTCHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CCcEEEEEccCCCHHHHHHHHHH
Confidence            4789999999999875  99999999999999999999999988888877766543 45789999999999999999999


Q ss_pred             HhhcCCCeeEEEEcccCCCC-----C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccc
Q 021391          102 YNSQGRPLNILINNAGIMAS-----P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRF  175 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~~~-----~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~  175 (313)
                      +.+++|++|+||||||+...     + .+.+.++|+..+++|+.+++.+++.+.+++.+       +|+||++||.++..
T Consensus        80 ~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~-------~G~IVnisS~~~~~  152 (256)
T 4fs3_A           80 IGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE-------GGSIVATTYLGGEF  152 (256)
T ss_dssp             HHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTT-------CEEEEEEECGGGTS
T ss_pred             HHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc-------CCEEEEEecccccc
Confidence            99999999999999997642     1 26777889999999999999999999887755       79999999999998


Q ss_pred             cccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----chhHhHHHHH
Q 021391          176 AYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----GILRGFCNTV  251 (313)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----~~~~~~~~~~  251 (313)
                      +.|               .+..|++||+|+++|+|+||.|++++|  ||||+|+||+++|++....    +..+.+.+..
T Consensus       153 ~~~---------------~~~~Y~asKaal~~ltr~lA~Ela~~g--IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~  215 (256)
T 4fs3_A          153 AVQ---------------NYNVMGVAKASLEANVKYLALDLGPDN--IRVNAISAGPIRTLSAKGVGGFNTILKEIKERA  215 (256)
T ss_dssp             CCT---------------TTHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHS
T ss_pred             Ccc---------------cchhhHHHHHHHHHHHHHHHHHhCccC--eEEEEEecCCCCChhhhhccCCHHHHHHHHhcC
Confidence            877               788999999999999999999999999  9999999999999987754    2344556677


Q ss_pred             HHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          252 GKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       252 ~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      |.+|..+|+|+|++++||+| |.++|+||+.|.+||++..
T Consensus       216 Pl~R~g~peevA~~v~fL~S-d~a~~iTG~~i~VDGG~~a  254 (256)
T 4fs3_A          216 PLKRNVDQVEVGKTAAYLLS-DLSSGVTGENIHVDSGFHA  254 (256)
T ss_dssp             TTSSCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCcCHHHHHHHHHHHhC-chhcCccCCEEEECcCHHh
Confidence            88889999999999999998 8999999999999988653

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=5.1e-50  Score=350.61  Aligned_cols=227  Identities=19%  Similarity=0.195  Sum_probs=202.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      +|+||||||++|||+++|++|+++|++|++++|+.+.+++..    ++  ..++.++++|++|+++++++++++.+++|+
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~----~~--~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~   75 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFA----KE--RPNLFYFHGDVADPLTLKKFVEYAMEKLQR   75 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----TT--CTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----Hh--cCCEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            399999999999999999999999999999999987665543    33  457889999999999999999999999999


Q ss_pred             eeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          109 LNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       109 id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                      ||+||||||+.....  +.+.++|++.+++|+.++++++|++.|+|.++      +|+||++||..+..+.|        
T Consensus        76 iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~------~G~IInisS~~~~~~~~--------  141 (247)
T 3ged_A           76 IDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN------KGRIINIASTRAFQSEP--------  141 (247)
T ss_dssp             CCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT------TCEEEEECCGGGTSCCT--------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc------CCcEEEEeecccccCCC--------
Confidence            999999999876533  88999999999999999999999999999873      59999999999998877        


Q ss_pred             CCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHHHHHH
Q 021391          187 NDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGAATT  266 (313)
Q Consensus       187 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~eva~~~  266 (313)
                             ...+|++||+|+.+|+|+||.|+++ |  ||||+|+||+++|++....  .+.....+|.+|..+|+|+|+++
T Consensus       142 -------~~~~Y~asKaal~~ltk~lA~ela~-~--IrVN~I~PG~i~t~~~~~~--~~~~~~~~Pl~R~g~pediA~~v  209 (247)
T 3ged_A          142 -------DSEAYASAKGGIVALTHALAMSLGP-D--VLVNCIAPGWINVTEQQEF--TQEDCAAIPAGKVGTPKDISNMV  209 (247)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHTT-T--SEEEEEEECSBCCCC---C--CHHHHHTSTTSSCBCHHHHHHHH
T ss_pred             -------CCHHHHHHHHHHHHHHHHHHHHHCC-C--CEEEEEecCcCCCCCcHHH--HHHHHhcCCCCCCcCHHHHHHHH
Confidence                   7789999999999999999999997 8  9999999999999987644  45566778889999999999999


Q ss_pred             HHHHccCCccCCCceeecCCcccC
Q 021391          267 CYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       267 ~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      +||++ +  +++||+.|.+||+..
T Consensus       210 ~fL~s-~--~~iTG~~i~VDGG~s  230 (247)
T 3ged_A          210 LFLCQ-Q--DFITGETIIVDGGMS  230 (247)
T ss_dssp             HHHHH-C--SSCCSCEEEESTTGG
T ss_pred             HHHHh-C--CCCCCCeEEECcCHH
Confidence            99997 3  599999999988754

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=2.6e-50  Score=356.16  Aligned_cols=234  Identities=19%  Similarity=0.210  Sum_probs=202.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      -|+|+||++|||||++|||+++|++|+++|++|++++|+.++.            ..+..++++|++++++++++++++.
T Consensus         6 l~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~   73 (261)
T 4h15_A            6 FLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG------------LPEELFVEADLTTKEGCAIVAEATR   73 (261)
T ss_dssp             CCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT------------SCTTTEEECCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC------------CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            3589999999999999999999999999999999999986421            2244578999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCC---CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccC
Q 021391          104 SQGRPLNILINNAGIMAS---PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSE  179 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~---~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~  179 (313)
                      +++|++|+||||||+...   +. +.+.++|++.+++|+.++++++|+++|+|.+     +++|+||++||..+..+.|.
T Consensus        74 ~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~-----~~~G~Iv~isS~~~~~~~~~  148 (261)
T 4h15_A           74 QRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVA-----RGSGVVVHVTSIQRVLPLPE  148 (261)
T ss_dssp             HHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-----HTCEEEEEECCGGGTSCCTT
T ss_pred             HHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhh-----cCCceEEEEEehhhccCCCC
Confidence            999999999999997543   33 7889999999999999999999999999998     44799999999999877652


Q ss_pred             CCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----------------h
Q 021391          180 GIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----------------I  243 (313)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----------------~  243 (313)
                                    ....|++||+|+++|+|+||.|++++|  ||||+|+||+++|++.....                .
T Consensus       149 --------------~~~~Y~asKaal~~lt~~lA~Ela~~g--IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~  212 (261)
T 4h15_A          149 --------------STTAYAAAKAALSTYSKAMSKEVSPKG--VRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKI  212 (261)
T ss_dssp             --------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred             --------------ccHHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHH
Confidence                          467899999999999999999999999  99999999999999865320                0


Q ss_pred             hHhHHHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          244 LRGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       244 ~~~~~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      .......+|.+|..+|+|+|+.++||+| +.++++||+.|.+||+.-+
T Consensus       213 ~~~~~~~~PlgR~g~peevA~~v~fLaS-~~a~~itG~~i~VDGG~v~  259 (261)
T 4h15_A          213 IMDGLGGIPLGRPAKPEEVANLIAFLAS-DRAASITGAEYTIDGGTVP  259 (261)
T ss_dssp             HHHHTTCCTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTCSC
T ss_pred             HHHHhcCCCCCCCcCHHHHHHHHHHHhC-chhcCccCcEEEECCcCcc
Confidence            1111223466788999999999999998 8999999999998887643

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=4.1e-47  Score=337.23  Aligned_cols=246  Identities=20%  Similarity=0.185  Sum_probs=216.2

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      ..++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++....++.++.++.+|++|+++++++++++
T Consensus         2 ~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   81 (265)
T 3lf2_A            2 KPYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEAC   81 (265)
T ss_dssp             -CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999999999999988887665667999999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCC-CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          103 NSQGRPLNILINNAGIMAS-PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~-~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      .+++|++|+||||||+... +. +.+.++|++.+++|+.++++++++++|+|.+     ++.|+||++||.++..+.+  
T Consensus        82 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-----~~~g~iv~isS~~~~~~~~--  154 (265)
T 3lf2_A           82 ERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLES-----RADAAIVCVNSLLASQPEP--  154 (265)
T ss_dssp             HHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----STTEEEEEEEEGGGTSCCT--
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----cCCeEEEEECCcccCCCCC--
Confidence            9999999999999998654 22 7889999999999999999999999999987     4578999999999988776  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc-----------hhHhHHH
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG-----------ILRGFCN  249 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~-----------~~~~~~~  249 (313)
                                   +...|++||+|++.|+++++.|++++|  ||||+|+||+++|++.....           .......
T Consensus       155 -------------~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  219 (265)
T 3lf2_A          155 -------------HMVATSAARAGVKNLVRSMAFEFAPKG--VRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLA  219 (265)
T ss_dssp             -------------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHH
T ss_pred             -------------CchhhHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHh
Confidence                         778999999999999999999999999  99999999999998765321           0111111


Q ss_pred             H---HHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          250 T---VGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       250 ~---~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      .   .+..+..+|+|+|++++||++ +.+.++||+.+.+||+...
T Consensus       220 ~~~~~p~~r~~~pedvA~~v~fL~s-~~~~~itG~~i~vdGG~~~  263 (265)
T 3lf2_A          220 RNKQIPLGRLGKPIEAARAILFLAS-PLSAYTTGSHIDVSGGLSR  263 (265)
T ss_dssp             HHTTCTTCSCBCHHHHHHHHHHHHS-GGGTTCCSEEEEESSSCCC
T ss_pred             hccCCCcCCCcCHHHHHHHHHHHhC-chhcCcCCCEEEECCCCcC
Confidence            1   456677899999999999998 8899999999998887654

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=8.1e-47  Score=332.20  Aligned_cols=240  Identities=26%  Similarity=0.331  Sum_probs=212.4

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      ..++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.     .+..++++|++|+++++++++++
T Consensus         3 ~~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~   77 (248)
T 3op4_A            3 QFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG-----DNGKGMALNVTNPESIEAVLKAI   77 (248)
T ss_dssp             CTTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG-----GGEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-----ccceEEEEeCCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999988887776663     35788999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          103 NSQGRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      .+++|++|+||||||+.....  +.+.++|++.+++|+.++++++++++|+|.+.     +.|+||++||.++..+.+  
T Consensus        78 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-----~~g~iv~isS~~~~~~~~--  150 (248)
T 3op4_A           78 TDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKK-----RQGRIINVGSVVGTMGNA--  150 (248)
T ss_dssp             HHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHHCCT--
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCCEEEEEcchhhcCCCC--
Confidence            999999999999999876532  77899999999999999999999999999883     478999999999988776  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHHHHHHhhcCC
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCNTVGKLVLKN  258 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~  258 (313)
                                   +...|++||+|++.|+++++.|++++|  ||||+|+||+++|++.+...  .........+..+..+
T Consensus       151 -------------~~~~Y~asK~a~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~  215 (248)
T 3op4_A          151 -------------GQANYAAAKAGVIGFTKSMAREVASRG--VTVNTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGD  215 (248)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBSSTTTTTSCHHHHHHHHHTCTTCSCBC
T ss_pred             -------------CChHHHHHHHHHHHHHHHHHHHHHHhC--eEEEEEeeCCCCCchhhhcCHHHHHHHHhcCCCCCCcC
Confidence                         778999999999999999999999999  99999999999999977542  2223334455667889


Q ss_pred             hHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          259 IPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       259 ~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      |+|+|++++||++ +.+.++||+.+.+||+..
T Consensus       216 p~dva~~v~~L~s-~~~~~itG~~i~vdgG~~  246 (248)
T 3op4_A          216 PREIASAVAFLAS-PEAAYITGETLHVNGGMY  246 (248)
T ss_dssp             HHHHHHHHHHHHS-GGGTTCCSCEEEESTTSS
T ss_pred             HHHHHHHHHHHcC-CccCCccCcEEEECCCee
Confidence            9999999999998 888999999999887653

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=5.2e-47  Score=337.69  Aligned_cols=243  Identities=21%  Similarity=0.247  Sum_probs=216.9

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      ..++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|+++++++++++
T Consensus        20 ~~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~   97 (271)
T 4ibo_A           20 IIFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNV--GHDAEAVAFDVTSESEIIEAFARL   97 (271)
T ss_dssp             GGGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT--TCCEEECCCCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHH
Confidence            357899999999999999999999999999999999999999999988888765  557999999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          103 NSQGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      .+++|++|+||||||+.... . +.+.++|++.+++|+.++++++++++|.|.+.     ..|+||++||.++..+.+  
T Consensus        98 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iV~isS~~~~~~~~--  170 (271)
T 4ibo_A           98 DEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPR-----GYGKIVNIGSLTSELARA--  170 (271)
T ss_dssp             HHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSBCT--
T ss_pred             HHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEEccHHhCCCCC--
Confidence            99999999999999987543 2 78899999999999999999999999999883     468999999999988766  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----chhHhHHHHHHHhhc
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----GILRGFCNTVGKLVL  256 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~~~~~  256 (313)
                                   +...|++||+|++.|+++++.|++++|  ||||+|+||+++|++....    .+...+....+..+.
T Consensus       171 -------------~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~  235 (271)
T 4ibo_A          171 -------------TVAPYTVAKGGIKMLTRAMAAEWAQYG--IQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRW  235 (271)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTCSC
T ss_pred             -------------CchhHHHHHHHHHHHHHHHHHHHhhhC--eEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCCCCC
Confidence                         678999999999999999999999999  9999999999999987643    223334455566778


Q ss_pred             CChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          257 KNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       257 ~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      .+|+|+|++++||++ +.+.++||+.+.+||+..
T Consensus       236 ~~pedva~~v~~L~s-~~~~~itG~~i~vdGG~~  268 (271)
T 4ibo_A          236 GKPQELVGTAVFLSA-SASDYVNGQIIYVDGGML  268 (271)
T ss_dssp             BCGGGGHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             cCHHHHHHHHHHHhC-ccccCCCCcEEEECCCee
Confidence            899999999999998 888999999999887654

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=9.5e-47  Score=333.26  Aligned_cols=244  Identities=25%  Similarity=0.290  Sum_probs=216.4

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      +.++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|+++++++++++
T Consensus         6 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~   83 (256)
T 3gaf_A            6 SPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA--GGKAIGLECNVTDEQHREAVIKAA   83 (256)
T ss_dssp             CTTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999999999888888765  568999999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCC-CCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          103 NSQGRPLNILINNAGIMAS-PFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      .+++|++|+||||||+... +.+.+.++|++.+++|+.++++++++++|+|.+     ++.|+||++||.++..+.+   
T Consensus        84 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-----~~~g~iv~isS~~~~~~~~---  155 (256)
T 3gaf_A           84 LDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQK-----AGGGAILNISSMAGENTNV---  155 (256)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-----TTCEEEEEECCGGGTCCCT---
T ss_pred             HHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-----cCCcEEEEEcCHHHcCCCC---
Confidence            9999999999999998754 337888999999999999999999999999988     4578999999999988766   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc---chhHhHHHHHHHhhcCC
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN---GILRGFCNTVGKLVLKN  258 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~~  258 (313)
                                  +...|++||++++.|+++++.|++++|  ||||+|+||+++|++....   .....+....+..+..+
T Consensus       156 ------------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~  221 (256)
T 3gaf_A          156 ------------RMASYGSSKAAVNHLTRNIAFDVGPMG--IRVNAIAPGAIKTDALATVLTPEIERAMLKHTPLGRLGE  221 (256)
T ss_dssp             ------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCHHHHHHCCHHHHHHHHTTCTTSSCBC
T ss_pred             ------------CchHHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEEEccccCchhhhccCHHHHHHHHhcCCCCCCCC
Confidence                        678999999999999999999999999  9999999999999986532   12233334445567889


Q ss_pred             hHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          259 IPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       259 ~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      |+|+|++++||++ +.+.++||+.+.+||+...
T Consensus       222 ~~dva~~~~~L~s-~~~~~itG~~i~vdgG~~~  253 (256)
T 3gaf_A          222 AQDIANAALFLCS-PAAAWISGQVLTVSGGGVQ  253 (256)
T ss_dssp             HHHHHHHHHHHHS-GGGTTCCSCEEEESTTSCC
T ss_pred             HHHHHHHHHHHcC-CcccCccCCEEEECCCccc
Confidence            9999999999998 8889999999998877543

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=1.1e-46  Score=334.04  Aligned_cols=247  Identities=23%  Similarity=0.276  Sum_probs=216.5

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      .++++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.... ..++.++.+|++|++++++++++
T Consensus         3 ~~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~v~~~~~~   81 (262)
T 3pk0_A            3 GSMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLG-SGKVIGVQTDVSDRAQCDALAGR   81 (262)
T ss_dssp             CCTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTS-SSCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC-CCcEEEEEcCCCCHHHHHHHHHH
Confidence            34678999999999999999999999999999999999999999998888887652 35799999999999999999999


Q ss_pred             HhhcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccc-cccc
Q 021391          102 YNSQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHR-FAYS  178 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~-~~~~  178 (313)
                      +.+++|++|+||||||+....  .+.+.++|++.+++|+.++++++++++|+|.++     +.++||++||..+. .+.+
T Consensus        82 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-----~~g~iv~isS~~~~~~~~~  156 (262)
T 3pk0_A           82 AVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIAS-----GSGRVVLTSSITGPITGYP  156 (262)
T ss_dssp             HHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----SSCEEEEECCSBTTTBCCT
T ss_pred             HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEechhhccCCCC
Confidence            999999999999999987542  277899999999999999999999999999883     47899999999875 5555


Q ss_pred             CCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--chhHhHHHHHHHhhc
Q 021391          179 EGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--GILRGFCNTVGKLVL  256 (313)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--~~~~~~~~~~~~~~~  256 (313)
                                     +...|++||++++.|+++++.|++++|  ||||+|+||+++|++....  .+...+....+..+.
T Consensus       157 ---------------~~~~Y~asK~a~~~l~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~  219 (262)
T 3pk0_A          157 ---------------GWSHYGATKAAQLGFMRTAAIELAPHK--ITVNAIMPGNIMTEGLLENGEEYIASMARSIPAGAL  219 (262)
T ss_dssp             ---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCCHHHHTTCHHHHHHHHTTSTTSSC
T ss_pred             ---------------CChhhHHHHHHHHHHHHHHHHHHHhhC--cEEEEEEeCcCcCccccccCHHHHHHHHhcCCCCCC
Confidence                           678999999999999999999999999  9999999999999976543  222334444566678


Q ss_pred             CChHHHHHHHHHHHccCCccCCCceeecCCcccCCC
Q 021391          257 KNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPN  292 (313)
Q Consensus       257 ~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~  292 (313)
                      .+|+|+|++++||++ +.+.++||+.+.+||+...+
T Consensus       220 ~~p~dva~~v~~L~s-~~~~~itG~~i~vdGG~~~~  254 (262)
T 3pk0_A          220 GTPEDIGHLAAFLAT-KEAGYITGQAIAVDGGQVLP  254 (262)
T ss_dssp             BCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTTTCC
T ss_pred             cCHHHHHHHHHHHhC-ccccCCcCCEEEECCCeecC
Confidence            899999999999998 88899999999988776554

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=1.3e-46  Score=334.76  Aligned_cols=247  Identities=26%  Similarity=0.301  Sum_probs=212.8

Q ss_pred             chhccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEec-CchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHH
Q 021391           19 EEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVR-NMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRK   97 (313)
Q Consensus        19 ~~~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~   97 (313)
                      +..+..++++||++|||||++|||+++|++|+++|++|++++| +.+..++..+++...  +.++.++.+|++|++++++
T Consensus        18 ~~~m~~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~v~~   95 (269)
T 4dmm_A           18 GSHMTALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA--GGEAFAVKADVSQESEVEA   95 (269)
T ss_dssp             ------CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHH
T ss_pred             cccccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHH
Confidence            3335567899999999999999999999999999999999998 666677777777654  5679999999999999999


Q ss_pred             HHHHHhhcCCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccc
Q 021391           98 FASEYNSQGRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRF  175 (313)
Q Consensus        98 ~~~~~~~~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~  175 (313)
                      +++++.+++|++|+||||||+.....  +.+.++|++.+++|+.++++++++++|.|.++     +.|+||++||.++..
T Consensus        96 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~  170 (269)
T 4dmm_A           96 LFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQ-----RSGRIINIASVVGEM  170 (269)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCHHHHH
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEECchhhcC
Confidence            99999999999999999999875532  77899999999999999999999999999883     478999999999988


Q ss_pred             cccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhh
Q 021391          176 AYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLV  255 (313)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~  255 (313)
                      +.+               +...|++||+|+++|+++++.|++++|  |+||+|+||+++|++..... ........+..+
T Consensus       171 ~~~---------------~~~~Y~asK~a~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~-~~~~~~~~p~~r  232 (269)
T 4dmm_A          171 GNP---------------GQANYSAAKAGVIGLTKTVAKELASRG--ITVNAVAPGFIATDMTSELA-AEKLLEVIPLGR  232 (269)
T ss_dssp             CCT---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBTTSCSCHHH-HHHHGGGCTTSS
T ss_pred             CCC---------------CchhHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEEECCCcCccccccc-HHHHHhcCCCCC
Confidence            776               678999999999999999999999999  99999999999999876532 123334455667


Q ss_pred             cCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          256 LKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       256 ~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      ..+|+|+|++++||++++.+.++||+.+.+||+..
T Consensus       233 ~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG~~  267 (269)
T 4dmm_A          233 YGEAAEVAGVVRFLAADPAAAYITGQVINIDGGLV  267 (269)
T ss_dssp             CBCHHHHHHHHHHHHHCGGGGGCCSCEEEESTTSC
T ss_pred             CCCHHHHHHHHHHHhCCcccCCCcCCEEEECCCee
Confidence            88999999999999995588999999999888754

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=5e-46  Score=332.23  Aligned_cols=258  Identities=22%  Similarity=0.223  Sum_probs=216.6

Q ss_pred             CCCCCCccchhccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCC
Q 021391           11 GFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS   90 (313)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s   90 (313)
                      .+.+.+..-...+.++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++++|++
T Consensus        14 ~~~~g~~~m~~~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~   91 (276)
T 3r1i_A           14 AQTQGPGSMSVLDLFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV--GGKALPIRCDVT   91 (276)
T ss_dssp             ---------CGGGGGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT--TCCCEEEECCTT
T ss_pred             ccccCCCCcccccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCC
Confidence            334444444445667899999999999999999999999999999999999999999988888765  557899999999


Q ss_pred             CHHHHHHHHHHHhhcCCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEE
Q 021391           91 SLASVRKFASEYNSQGRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNV  168 (313)
Q Consensus        91 ~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~i  168 (313)
                      |+++++++++++.+++|++|+||||||+.....  +.+.++|++.+++|+.++++++++++|.|.++    ..+++||++
T Consensus        92 d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~----~~~g~iv~i  167 (276)
T 3r1i_A           92 QPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQ----GLGGTIITT  167 (276)
T ss_dssp             CHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TSCEEEEEE
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----CCCcEEEEE
Confidence            999999999999999999999999999876532  78899999999999999999999999999884    235899999


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc-hhHhH
Q 021391          169 SSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG-ILRGF  247 (313)
Q Consensus       169 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~-~~~~~  247 (313)
                      ||.++..+.+.             ++...|++||+|++.|+++++.|++++|  ||||+|+||+++|++..... ....+
T Consensus       168 sS~~~~~~~~~-------------~~~~~Y~asKaa~~~l~~~la~e~~~~g--Irvn~v~PG~v~T~~~~~~~~~~~~~  232 (276)
T 3r1i_A          168 ASMSGHIINIP-------------QQVSHYCTSKAAVVHLTKAMAVELAPHQ--IRVNSVSPGYIRTELVEPLADYHALW  232 (276)
T ss_dssp             CCGGGTSCCCS-------------SCCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCSTTTGGGGGGHHHH
T ss_pred             CchHhcccCCC-------------CCcchHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEeeCCCcCCccccchHHHHHH
Confidence            99988765321             1457899999999999999999999999  99999999999999977542 22233


Q ss_pred             HHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          248 CNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       248 ~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      ....+..+..+|+|+|++++||++ +.+.++||+.+.+||+..
T Consensus       233 ~~~~p~~r~~~pedvA~~v~fL~s-~~~~~itG~~i~vdGG~~  274 (276)
T 3r1i_A          233 EPKIPLGRMGRPEELTGLYLYLAS-AASSYMTGSDIVIDGGYT  274 (276)
T ss_dssp             GGGSTTSSCBCGGGSHHHHHHHHS-GGGTTCCSCEEEESTTTT
T ss_pred             HhcCCCCCCcCHHHHHHHHHHHcC-ccccCccCcEEEECcCcc
Confidence            344455678899999999999998 889999999999887653

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=2e-46  Score=335.44  Aligned_cols=253  Identities=23%  Similarity=0.199  Sum_probs=214.4

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      +.+++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...  +.++.++.+|++|+++++++++++.
T Consensus         3 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~   80 (280)
T 3tox_A            3 MSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG--GGEAAALAGDVGDEALHEALVELAV   80 (280)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTT--TCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHH
Confidence            34689999999999999999999999999999999999999988888877553  5689999999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCC--CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccc-ccccC
Q 021391          104 SQGRPLNILINNAGIMAS--PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHR-FAYSE  179 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~-~~~~~  179 (313)
                      +++|++|+||||||+...  +. +.+.++|++.+++|+.++++++++++|.|.+     +..|+||++||..+. .+.+ 
T Consensus        81 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-----~~~g~iv~isS~~~~~~~~~-  154 (280)
T 3tox_A           81 RRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAA-----LGGGSLTFTSSFVGHTAGFA-  154 (280)
T ss_dssp             HHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-----TTCEEEEEECCSBTTTBCCT-
T ss_pred             HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-----cCCCEEEEEcChhhCcCCCC-
Confidence            999999999999997633  23 7889999999999999999999999999998     457899999999887 4544 


Q ss_pred             CCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc------chhHhHHHHHHH
Q 021391          180 GIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN------GILRGFCNTVGK  253 (313)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~------~~~~~~~~~~~~  253 (313)
                                    +...|++||+|++.|+++++.|++++|  |+||+|+||+++|++....      .....+....+.
T Consensus       155 --------------~~~~Y~asKaa~~~l~~~la~e~~~~g--Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~  218 (280)
T 3tox_A          155 --------------GVAPYAASKAGLIGLVQALAVELGARG--IRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHAL  218 (280)
T ss_dssp             --------------TCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTT
T ss_pred             --------------CchhHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEECCCCCchhhhhccccCHHHHHHHhccCcc
Confidence                          678999999999999999999999999  9999999999999986541      111222233445


Q ss_pred             hhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCCccCCCHHHH
Q 021391          254 LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMELA  301 (313)
Q Consensus       254 ~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~~~~~~~~~  301 (313)
                      .+..+|+|+|++++||++ +.+.++||+.|.+||+...+..+.+++.+
T Consensus       219 ~r~~~pedvA~~v~~L~s-~~a~~itG~~i~vdGG~~~~~~a~~~~~~  265 (280)
T 3tox_A          219 KRIARPEEIAEAALYLAS-DGASFVTGAALLADGGASVTKAAENLYFQ  265 (280)
T ss_dssp             SSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGGCC--------
T ss_pred             CCCcCHHHHHHHHHHHhC-ccccCCcCcEEEECCCccccccccchHHH
Confidence            667899999999999998 78899999999999988888888776655

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=2.5e-46  Score=332.40  Aligned_cols=247  Identities=21%  Similarity=0.262  Sum_probs=216.7

Q ss_pred             hccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHH
Q 021391           21 VTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFAS  100 (313)
Q Consensus        21 ~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~  100 (313)
                      ....++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++.++++|++|+++++++++
T Consensus        12 ~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~v~~~~~   90 (266)
T 4egf_A           12 YAGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQF-GTDVHTVAIDLAEPDAPAELAR   90 (266)
T ss_dssp             BCGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTSTTHHHHHHH
T ss_pred             cccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHH
Confidence            345678999999999999999999999999999999999999999998888887633 4679999999999999999999


Q ss_pred             HHhhcCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccccc
Q 021391          101 EYNSQGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYS  178 (313)
Q Consensus       101 ~~~~~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~  178 (313)
                      ++.+++|++|+||||||+.... . +.+.++|++.+++|+.+++++++++.|.|.++    +.+|+||++||.++..+.+
T Consensus        91 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~----~~~g~iv~isS~~~~~~~~  166 (266)
T 4egf_A           91 RAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAA----GEGGAIITVASAAALAPLP  166 (266)
T ss_dssp             HHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TSCEEEEEECCGGGTSCCT
T ss_pred             HHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc----CCCeEEEEEcchhhccCCC
Confidence            9999999999999999987543 2 77889999999999999999999999999884    2368999999999988766


Q ss_pred             CCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----chhHhHHHHHHHh
Q 021391          179 EGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----GILRGFCNTVGKL  254 (313)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~~~  254 (313)
                                     +...|++||+|++.|+++++.|++++|  ||||+|+||+++|++....    .....+....+..
T Consensus       167 ---------------~~~~Y~asK~a~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~  229 (266)
T 4egf_A          167 ---------------DHYAYCTSKAGLVMATKVLARELGPHG--IRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLG  229 (266)
T ss_dssp             ---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTTS
T ss_pred             ---------------CChHHHHHHHHHHHHHHHHHHHHhhhC--eEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCCC
Confidence                           678999999999999999999999999  9999999999999986532    1222333445566


Q ss_pred             hcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          255 VLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       255 ~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      +..+|+|+|++++||++ +.+.++||+.+.+||+..
T Consensus       230 r~~~p~dva~~v~~L~s-~~~~~itG~~i~vdGG~~  264 (266)
T 4egf_A          230 RFAVPHEVSDAVVWLAS-DAASMINGVDIPVDGGYT  264 (266)
T ss_dssp             SCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             CCcCHHHHHHHHHHHhC-chhcCccCcEEEECCCcc
Confidence            77899999999999998 888999999999887754

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=9.1e-46  Score=331.20  Aligned_cols=260  Identities=18%  Similarity=0.152  Sum_probs=221.9

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCC-CCceEEEEccCCCHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIP-SAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      +.++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++..... +.++.++.+|++|++++++++++
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   84 (281)
T 3svt_A            5 MQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDA   84 (281)
T ss_dssp             ---CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHH
Confidence            56788999999999999999999999999999999999999999998888876532 23789999999999999999999


Q ss_pred             HhhcCCCeeEEEEcccCCCC--CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccccc
Q 021391          102 YNSQGRPLNILINNAGIMAS--PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYS  178 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~  178 (313)
                      +.+++|++|+||||||+...  +. +.+.++|++.+++|+.++++++++++|.|.+     +++|+||++||.++..+.+
T Consensus        85 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~-----~~~g~iv~isS~~~~~~~~  159 (281)
T 3svt_A           85 VTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVR-----GGGGSFVGISSIAASNTHR  159 (281)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----TTCEEEEEECCHHHHSCCT
T ss_pred             HHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-----cCCcEEEEEeCHHHcCCCC
Confidence            99999999999999997432  22 7888999999999999999999999999998     4578999999999987766


Q ss_pred             CCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----chhHhHHHHHHHh
Q 021391          179 EGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----GILRGFCNTVGKL  254 (313)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~~~  254 (313)
                                     +...|++||++++.|+++++.|++++|  ||||+|+||+++|++....    .....+....+..
T Consensus       160 ---------------~~~~Y~asK~a~~~l~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~  222 (281)
T 3svt_A          160 ---------------WFGAYGVTKSAVDHLMQLAADELGASW--VRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLP  222 (281)
T ss_dssp             ---------------TCTHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSS
T ss_pred             ---------------CChhHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCC
Confidence                           678999999999999999999999999  9999999999999987643    2233344455666


Q ss_pred             hcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCCccCCCHHHHHHHH
Q 021391          255 VLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMELAKKLW  305 (313)
Q Consensus       255 ~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~~~~~~~~~~~~~  305 (313)
                      +..+|+|+|++++||++ +.+.++||+.+.+||+........-.+...++|
T Consensus       223 r~~~~~dva~~~~~l~s-~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~  272 (281)
T 3svt_A          223 RQGEVEDVANMAMFLLS-DAASFVTGQVINVDGGQMLRRGPDFSAMLEPVF  272 (281)
T ss_dssp             SCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHhC-cccCCCCCCEEEeCCChhcccCCcchhcccccc
Confidence            78899999999999998 788999999999988877664444444444444

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=2.2e-46  Score=333.51  Aligned_cols=244  Identities=26%  Similarity=0.269  Sum_probs=214.5

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      +..+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|+++++++++++
T Consensus        22 m~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~   99 (270)
T 3ftp_A           22 MDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQA--GLEGRGAVLNVNDATAVDALVEST   99 (270)
T ss_dssp             -CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH--TCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEEeCCCHHHHHHHHHHH
Confidence            455689999999999999999999999999999999999999999888888766  557889999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          103 NSQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      .+++|++|+||||||+....  .+.+.++|++.+++|+.++++++++++|.|.+.     ++|+||++||.++..+.+  
T Consensus       100 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~--  172 (270)
T 3ftp_A          100 LKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKA-----RGGRIVNITSVVGSAGNP--  172 (270)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHHCCT--
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCCEEEEECchhhCCCCC--
Confidence            99999999999999987542  277889999999999999999999999999883     478999999999988776  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHHHHHHhhcCC
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCNTVGKLVLKN  258 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~  258 (313)
                                   +...|++||+|++.|+++++.|++++|  |+||+|+||+++|++.....  ....+....+..+..+
T Consensus       173 -------------~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~  237 (270)
T 3ftp_A          173 -------------GQVNYAAAKAGVAGMTRALAREIGSRG--ITVNCVAPGFIDTDMTKGLPQEQQTALKTQIPLGRLGS  237 (270)
T ss_dssp             -------------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSHHHHHSCHHHHHHHHTTCTTCSCBC
T ss_pred             -------------CchhHHHHHHHHHHHHHHHHHHHhhhC--eEEEEEEeCCCcCcchhhcCHHHHHHHHhcCCCCCCCC
Confidence                         778999999999999999999999999  99999999999999865432  1222233344566779


Q ss_pred             hHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          259 IPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       259 ~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      |+|+|++++||++ +.+.++||+.+.+||+...
T Consensus       238 pedvA~~v~~L~s-~~~~~itG~~i~vdGG~~~  269 (270)
T 3ftp_A          238 PEDIAHAVAFLAS-PQAGYITGTTLHVNGGMFM  269 (270)
T ss_dssp             HHHHHHHHHHHHS-GGGTTCCSCEEEESTTSSC
T ss_pred             HHHHHHHHHHHhC-CCcCCccCcEEEECCCccc
Confidence            9999999999998 8889999999998887543

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=1.8e-45  Score=327.75  Aligned_cols=238  Identities=23%  Similarity=0.255  Sum_probs=209.5

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      +.++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|++|+++++++++++
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~   79 (271)
T 3tzq_B            5 MTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV-----GRGAVHHVVDLTNEVSVRALIDFT   79 (271)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH-----CTTCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCCeEEEECCCCCHHHHHHHHHHH
Confidence            456789999999999999999999999999999999999998888877766     457889999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCC---CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccccc
Q 021391          103 NSQGRPLNILINNAGIMAS---PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYS  178 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~---~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~  178 (313)
                      .+++|++|+||||||+...   +. +.+.++|++.+++|+.++++++++++|+|.+     +..|+||++||..+..+.+
T Consensus        80 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-----~~~g~iv~isS~~~~~~~~  154 (271)
T 3tzq_B           80 IDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLIS-----AGGGAIVNISSATAHAAYD  154 (271)
T ss_dssp             HHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----TTCEEEEEECCGGGTSBCS
T ss_pred             HHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-----cCCCEEEEECCHHHcCCCC
Confidence            9999999999999998732   22 7789999999999999999999999999988     4578999999999988766


Q ss_pred             CCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc---chhHhHHHHHHHhh
Q 021391          179 EGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN---GILRGFCNTVGKLV  255 (313)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~---~~~~~~~~~~~~~~  255 (313)
                                     +...|++||+|++.|+++++.|++++|  |+||+|+||+++|++....   +....+....+..+
T Consensus       155 ---------------~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r  217 (271)
T 3tzq_B          155 ---------------MSTAYACTKAAIETLTRYVATQYGRHG--VRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLAGR  217 (271)
T ss_dssp             ---------------SCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCTTTC---CHHHHHHHHTTSTTSS
T ss_pred             ---------------CChHHHHHHHHHHHHHHHHHHHHhhcC--EEEEEEEeCCCcCccccccCCHHHHHHHHhcCCCCC
Confidence                           678999999999999999999999999  9999999999999987632   22233334445567


Q ss_pred             cCChHHHHHHHHHHHccCCccCCCceeecCCcc
Q 021391          256 LKNIPQGAATTCYVALHPQVQGVSGEYFSDSNI  288 (313)
Q Consensus       256 ~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~  288 (313)
                      ..+|+|+|+.++||++ +.+.++||+.+.+||+
T Consensus       218 ~~~p~dvA~~v~~L~s-~~~~~itG~~i~vdGG  249 (271)
T 3tzq_B          218 IGEPHEIAELVCFLAS-DRAAFITGQVIAADSG  249 (271)
T ss_dssp             CBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHhC-cccCCcCCCEEEECCC
Confidence            7899999999999998 7889999999998877

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=1.2e-45  Score=326.70  Aligned_cols=242  Identities=20%  Similarity=0.207  Sum_probs=213.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEE-ecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMA-VRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      +||++|||||++|||+++|++|+++|++|+++ +|+.+.+++..+++...  +.++.++.+|++|+++++++++++.+++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL--GVKVLVVKANVGQPAKIKEMFQQIDETF   80 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            68999999999999999999999999999997 89988888888887654  5689999999999999999999999999


Q ss_pred             CCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCC
Q 021391          107 RPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFD  184 (313)
Q Consensus       107 g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  184 (313)
                      |++|+||||||+.... . +.+.++|++.+++|+.++++++++++|+|.+     ++.|+||++||.++..+.+      
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~-----~~~g~iv~isS~~~~~~~~------  149 (258)
T 3oid_A           81 GRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEK-----NGGGHIVSISSLGSIRYLE------  149 (258)
T ss_dssp             SCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHT-----TTCEEEEEEEEGGGTSBCT------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-----cCCcEEEEECchhhCCCCC------
Confidence            9999999999976542 2 7889999999999999999999999999998     4578999999999887766      


Q ss_pred             CCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----hhHhHHHHHHHhhcCChH
Q 021391          185 KINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----ILRGFCNTVGKLVLKNIP  260 (313)
Q Consensus       185 ~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~  260 (313)
                               +...|++||+|++.|+++++.|++++|  ||||+|+||+++|++.....    ....+....+..+..+|+
T Consensus       150 ---------~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~  218 (258)
T 3oid_A          150 ---------NYTTVGVSKAALEALTRYLAVELSPKQ--IIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIK  218 (258)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHH
T ss_pred             ---------CcHHHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCCCCCcCHH
Confidence                     678999999999999999999999999  99999999999999877542    223344455667788999


Q ss_pred             HHHHHHHHHHccCCccCCCceeecCCcccCCCcc
Q 021391          261 QGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQ  294 (313)
Q Consensus       261 eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~~  294 (313)
                      |+|++++||++ +.+.++||+.+.+||+......
T Consensus       219 dva~~v~~L~s-~~~~~itG~~i~vdGG~~~~~~  251 (258)
T 3oid_A          219 DMVDTVEFLVS-SKADMIRGQTIIVDGGRSLLVL  251 (258)
T ss_dssp             HHHHHHHHHTS-STTTTCCSCEEEESTTGGGBCC
T ss_pred             HHHHHHHHHhC-cccCCccCCEEEECCCccCCCC
Confidence            99999999998 8889999999998877655443

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=6.6e-46  Score=331.28  Aligned_cols=244  Identities=21%  Similarity=0.219  Sum_probs=213.4

Q ss_pred             chhccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHH
Q 021391           19 EEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKF   98 (313)
Q Consensus        19 ~~~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~   98 (313)
                      ..+.+.++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|.++++++
T Consensus        23 ~~~~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~  100 (275)
T 4imr_A           23 MRLETIFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS--GGTAQELAGDLSEAGAGTDL  100 (275)
T ss_dssp             TSHHHHHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHT--TCCEEEEECCTTSTTHHHHH
T ss_pred             ccccccCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHH
Confidence            3445667899999999999999999999999999999999999999999888888765  56799999999999999999


Q ss_pred             HHHHhhcCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccc
Q 021391           99 ASEYNSQGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFA  176 (313)
Q Consensus        99 ~~~~~~~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~  176 (313)
                      ++++.+. +++|+||||||+.... . +.+.++|++.+++|+.++++++++++|.|.+.     +.|+||++||.++..+
T Consensus       101 ~~~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~Iv~isS~~~~~~  174 (275)
T 4imr_A          101 IERAEAI-APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVAR-----KWGRVVSIGSINQLRP  174 (275)
T ss_dssp             HHHHHHH-SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSC
T ss_pred             HHHHHHh-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEECCHHhCCC
Confidence            9999887 8999999999986542 2 78899999999999999999999999999883     4789999999998875


Q ss_pred             ccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-----chhHhHHHHH
Q 021391          177 YSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-----GILRGFCNTV  251 (313)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-----~~~~~~~~~~  251 (313)
                      .+               ....|++||+|++.|+++++.|++++|  |+||+|+||+++|++....     .....+....
T Consensus       175 ~~---------------~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  237 (275)
T 4imr_A          175 KS---------------VVTAYAATKAAQHNLIQSQARDFAGDN--VLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTL  237 (275)
T ss_dssp             CT---------------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHH
T ss_pred             CC---------------CchhhHHHHHHHHHHHHHHHHHhcccC--cEEEEEEeccccCcccccccccChHHHHHHHhhc
Confidence            54               567799999999999999999999999  9999999999999986542     1222333344


Q ss_pred             -HHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcc
Q 021391          252 -GKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNI  288 (313)
Q Consensus       252 -~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~  288 (313)
                       +..+..+|+|+|++++||++ +.+.++||+.|.+||+
T Consensus       238 ~p~~r~~~pedvA~~v~fL~s-~~a~~itG~~i~vdGG  274 (275)
T 4imr_A          238 NWMGRAGRPEEMVGAALFLAS-EACSFMTGETIFLTGG  274 (275)
T ss_dssp             STTCSCBCGGGGHHHHHHHHS-GGGTTCCSCEEEESSC
T ss_pred             CccCCCcCHHHHHHHHHHHcC-cccCCCCCCEEEeCCC
Confidence             56678899999999999998 8889999999998876

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=4e-46  Score=331.11  Aligned_cols=243  Identities=23%  Similarity=0.249  Sum_probs=204.6

Q ss_pred             chhccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHH
Q 021391           19 EEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKF   98 (313)
Q Consensus        19 ~~~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~   98 (313)
                      ..+.+.++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++.+|++|+++++++
T Consensus        17 ~g~~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~   91 (266)
T 3grp_A           17 QGPGSMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL-----GKDVFVFSANLSDRKSIKQL   91 (266)
T ss_dssp             ----CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CSSEEEEECCTTSHHHHHHH
T ss_pred             CCCcchhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEeecCCHHHHHHH
Confidence            3344567899999999999999999999999999999999999988887776554     56799999999999999999


Q ss_pred             HHHHhhcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccc
Q 021391           99 ASEYNSQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFA  176 (313)
Q Consensus        99 ~~~~~~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~  176 (313)
                      ++++.++++++|+||||||+....  .+.+.++|++.+++|+.++++++++++|.|.+.     +.|+||++||.++..+
T Consensus        92 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~Iv~isS~~~~~~  166 (266)
T 3grp_A           92 AEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRR-----RYGRIINITSIVGVVG  166 (266)
T ss_dssp             HHHHHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCC-----
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCcEEEEECCHHHcCC
Confidence            999999999999999999987542  267889999999999999999999999999883     4789999999999887


Q ss_pred             ccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHHHHHHh
Q 021391          177 YSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCNTVGKL  254 (313)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~~~  254 (313)
                      .+               +...|++||+|++.++++++.|++++|  ||||+|+||+++|++.....  ....+....+..
T Consensus       167 ~~---------------~~~~Y~asKaa~~~~~~~la~e~~~~g--I~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~  229 (266)
T 3grp_A          167 NP---------------GQTNYCAAKAGLIGFSKALAQEIASRN--ITVNCIAPGFIKSAMTDKLNEKQKEAIMAMIPMK  229 (266)
T ss_dssp             -----------------CHHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSHHHHTCCHHHHHHHHTTCTTC
T ss_pred             CC---------------CchhHHHHHHHHHHHHHHHHHHhhhhC--cEEEEEeeCcCCCchhhccCHHHHHHHHhcCCCC
Confidence            66               678999999999999999999999999  99999999999999876542  223333445666


Q ss_pred             hcCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          255 VLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       255 ~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      +..+|+|+|++++||++ +.+.++||+.+.+||+.
T Consensus       230 r~~~~edvA~~v~~L~s-~~~~~itG~~i~vdGG~  263 (266)
T 3grp_A          230 RMGIGEEIAFATVYLAS-DEAAYLTGQTLHINGGM  263 (266)
T ss_dssp             SCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTC
T ss_pred             CCcCHHHHHHHHHHHhC-ccccCccCCEEEECCCe
Confidence            78899999999999998 88899999999988765

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=8.2e-46  Score=331.98  Aligned_cols=246  Identities=26%  Similarity=0.245  Sum_probs=207.3

Q ss_pred             chhccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHH
Q 021391           19 EEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKF   98 (313)
Q Consensus        19 ~~~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~   98 (313)
                      ....+.|++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++++|++|+++++++
T Consensus        18 ~~~~~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~   95 (283)
T 3v8b_A           18 LYFQSMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA--GGQAIALEADVSDELQMRNA   95 (283)
T ss_dssp             ---------CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTT--TCCEEEEECCTTCHHHHHHH
T ss_pred             hhhhhhcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHH
Confidence            3444667899999999999999999999999999999999999999988888887654  56799999999999999999


Q ss_pred             HHHHhhcCCCeeEEEEcccCCCC--CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccc
Q 021391           99 ASEYNSQGRPLNILINNAGIMAS--PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRF  175 (313)
Q Consensus        99 ~~~~~~~~g~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~  175 (313)
                      ++++.+++|++|+||||||+...  +. +.+.++|++.+++|+.++++++++++|+|.+.     +.|+||++||.++..
T Consensus        96 ~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~Iv~isS~~~~~  170 (283)
T 3v8b_A           96 VRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQR-----GGGAIVVVSSINGTR  170 (283)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCSBTTT
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCceEEEEcChhhcc
Confidence            99999999999999999998632  33 78899999999999999999999999999883     478999999998876


Q ss_pred             --cccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHh-------
Q 021391          176 --AYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRG-------  246 (313)
Q Consensus       176 --~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~-------  246 (313)
                        +.+               +...|++||+|++.++++++.|++++|  ||||+|+||+++|++.........       
T Consensus       171 ~~~~~---------------~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~  233 (283)
T 3v8b_A          171 TFTTP---------------GATAYTATKAAQVAIVQQLALELGKHH--IRVNAVCPGAIETNISDNTKLRHEEETAIPV  233 (283)
T ss_dssp             BCCST---------------TCHHHHHHHHHHHHHHHHHHHHTTTTT--EEEEEEEECSBSSCTTCCTTBCCHHHHSCCC
T ss_pred             CCCCC---------------CchHHHHHHHHHHHHHHHHHHHhCccC--cEEEEEEeCCCcCCcccccccccchhhhhhh
Confidence              434               678999999999999999999999999  999999999999998765311111       


Q ss_pred             --HHHHHHH--hhcCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          247 --FCNTVGK--LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       247 --~~~~~~~--~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                        .....+.  .+..+|+|+|++++||++ +.+.++||+.+.+||+.
T Consensus       234 ~~~~~~~p~~~~r~~~pedvA~~v~fL~s-~~a~~itG~~i~vdGG~  279 (283)
T 3v8b_A          234 EWPKGQVPITDGQPGRSEDVAELIRFLVS-ERARHVTGSPVWIDGGQ  279 (283)
T ss_dssp             BCTTCSCGGGTTCCBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTH
T ss_pred             hhhhhcCccccCCCCCHHHHHHHHHHHcC-ccccCCcCCEEEECcCc
Confidence              1112233  667899999999999998 88999999999988764

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=7.3e-46  Score=333.83  Aligned_cols=247  Identities=21%  Similarity=0.255  Sum_probs=215.6

Q ss_pred             hccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHH
Q 021391           21 VTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFAS  100 (313)
Q Consensus        21 ~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~  100 (313)
                      ....++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.... ..++.++++|++|+++++++++
T Consensus        33 ~~~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~v~~~~~  111 (293)
T 3rih_A           33 RKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELG-AGNVIGVRLDVSDPGSCADAAR  111 (293)
T ss_dssp             -CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSS-SSCEEEEECCTTCHHHHHHHHH
T ss_pred             cccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhC-CCcEEEEEEeCCCHHHHHHHHH
Confidence            345678999999999999999999999999999999999999999998888886542 2579999999999999999999


Q ss_pred             HHhhcCCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccc-ccc
Q 021391          101 EYNSQGRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHR-FAY  177 (313)
Q Consensus       101 ~~~~~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~-~~~  177 (313)
                      ++.+++|++|+||||||+.....  +.+.++|++.+++|+.++++++++++|.|.+.     +.++||++||..+. .+.
T Consensus       112 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~iV~isS~~~~~~~~  186 (293)
T 3rih_A          112 TVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTAS-----GRGRVILTSSITGPVTGY  186 (293)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH-----SSCEEEEECCSBTTTBBC
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEEeChhhccCCC
Confidence            99999999999999999875432  77899999999999999999999999999883     47899999999885 555


Q ss_pred             cCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--chhHhHHHHHHHhh
Q 021391          178 SEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--GILRGFCNTVGKLV  255 (313)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--~~~~~~~~~~~~~~  255 (313)
                      +               +...|++||++++.|+++++.|++++|  |+||+|+||+++|++....  .+...+....+..+
T Consensus       187 ~---------------~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r  249 (293)
T 3rih_A          187 P---------------GWSHYGASKAAQLGFMRTAAIELAPRG--VTVNAILPGNILTEGLVDMGEEYISGMARSIPMGM  249 (293)
T ss_dssp             T---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCCHHHHHTCHHHHHHHHTTSTTSS
T ss_pred             C---------------CCHHHHHHHHHHHHHHHHHHHHHhhhC--eEEEEEecCCCcCcchhhccHHHHHHHHhcCCCCC
Confidence            5               678999999999999999999999999  9999999999999876543  22233344455667


Q ss_pred             cCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          256 LKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       256 ~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      ..+|+|+|+.++||++ +.+.++||+.|.+||+...
T Consensus       250 ~~~p~dvA~~v~fL~s-~~a~~itG~~i~vdGG~~~  284 (293)
T 3rih_A          250 LGSPVDIGHLAAFLAT-DEAGYITGQAIVVDGGQVL  284 (293)
T ss_dssp             CBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTTTC
T ss_pred             CCCHHHHHHHHHHHhC-ccccCCCCCEEEECCCccC
Confidence            7899999999999998 8889999999998877654

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=1.4e-45  Score=324.03  Aligned_cols=239  Identities=26%  Similarity=0.298  Sum_probs=209.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|++|+++++++++++.+
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~   76 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI-----GKKARAIAADISDPGSVKALFAEIQA   76 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            3589999999999999999999999999999999999998888777666     55789999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          105 QGRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      ++|++|+||||||+.....  +.+.++|++.+++|+.++++++++++|+|.+.    +..++||++||..+..+.+    
T Consensus        77 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~----~~~g~iv~isS~~~~~~~~----  148 (247)
T 3rwb_A           77 LTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAA----GKAGRVISIASNTFFAGTP----  148 (247)
T ss_dssp             HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCCEEEEEECCTHHHHTCT----
T ss_pred             HCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc----CCCcEEEEECchhhccCCC----
Confidence            9999999999999875432  78899999999999999999999999999884    2368999999999988777    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHHH-HHHhhcCCh
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCNT-VGKLVLKNI  259 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~~-~~~~~~~~~  259 (313)
                                 +...|++||+|++.|+++++.|++++|  ||||+|+||+++|++.....  ........ .+..+..+|
T Consensus       149 -----------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~p  215 (247)
T 3rwb_A          149 -----------NMAAYVAAKGGVIGFTRALATELGKYN--ITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGKGQP  215 (247)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHTSGGGGGHHHHHHHSSSCSCBCH
T ss_pred             -----------CchhhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcCcCccccccChhHHHHHHhcccccCCCcCH
Confidence                       678999999999999999999999999  99999999999998765432  11222222 345567899


Q ss_pred             HHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          260 PQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       260 ~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      +|+|+.++||++ +.+.++||+.+.+||+..
T Consensus       216 edva~~v~~L~s-~~~~~itG~~i~vdGG~~  245 (247)
T 3rwb_A          216 EHIADVVSFLAS-DDARWITGQTLNVDAGMV  245 (247)
T ss_dssp             HHHHHHHHHHHS-GGGTTCCSCEEEESTTSS
T ss_pred             HHHHHHHHHHhC-ccccCCCCCEEEECCCcc
Confidence            999999999998 888999999999887653

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=3.5e-45  Score=323.68  Aligned_cols=241  Identities=20%  Similarity=0.238  Sum_probs=211.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      +++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++++|++|+++++++++++.
T Consensus         3 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~   77 (259)
T 4e6p_A            3 MKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI-----GPAAYAVQMDVTRQDSIDAAIAATV   77 (259)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCCceEEEeeCCCHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999999998888777766     4568999999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCC-CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          104 SQGRPLNILINNAGIMAS-PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~-~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      +++|++|+||||||+... +. +.+.++|++.+++|+.+++++++++.|.|.+.    +.+|+||++||.++..+.+   
T Consensus        78 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~----~~~g~iv~isS~~~~~~~~---  150 (259)
T 4e6p_A           78 EHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQ----GRGGKIINMASQAGRRGEA---  150 (259)
T ss_dssp             HHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TSCEEEEEECCGGGTSCCT---
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc----CCCeEEEEECChhhccCCC---
Confidence            999999999999998654 22 77899999999999999999999999999874    2368999999999988766   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-------------chhHhHH
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-------------GILRGFC  248 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-------------~~~~~~~  248 (313)
                                  +...|++||++++.|+++++.|++++|  |+||+|+||+++|++....             +....+.
T Consensus       151 ------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (259)
T 4e6p_A          151 ------------LVAIYCATKAAVISLTQSAGLDLIKHR--INVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVG  216 (259)
T ss_dssp             ------------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHH
T ss_pred             ------------CChHHHHHHHHHHHHHHHHHHHhhhcC--CEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHh
Confidence                        678999999999999999999999999  9999999999999986532             1122233


Q ss_pred             HHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          249 NTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       249 ~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      ...+..+..+|+|+|++++||++ +.+.++||+.+.+||+...
T Consensus       217 ~~~p~~r~~~~~dva~~v~~L~s-~~~~~itG~~i~vdgG~~~  258 (259)
T 4e6p_A          217 EAVPFGRMGTAEDLTGMAIFLAS-AESDYIVSQTYNVDGGNWM  258 (259)
T ss_dssp             HHSTTSSCBCTHHHHHHHHHTTS-GGGTTCCSCEEEESTTSSC
T ss_pred             ccCCCCCCcCHHHHHHHHHHHhC-CccCCCCCCEEEECcChhc
Confidence            44556678899999999999998 8889999999998877543

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=1.7e-45  Score=329.01  Aligned_cols=247  Identities=23%  Similarity=0.269  Sum_probs=211.5

Q ss_pred             chhccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHH
Q 021391           19 EEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKF   98 (313)
Q Consensus        19 ~~~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~   98 (313)
                      ..+...|+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++++|++|+++++++
T Consensus        17 ~~~~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~   91 (277)
T 4dqx_A           17 NLYFQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI-----GSKAFGVRVDVSSAKDAESM   91 (277)
T ss_dssp             -----CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHH
T ss_pred             ccccccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHH
Confidence            3445678899999999999999999999999999999999999988887776664     56789999999999999999


Q ss_pred             HHHHhhcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccc
Q 021391           99 ASEYNSQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFA  176 (313)
Q Consensus        99 ~~~~~~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~  176 (313)
                      ++++.+++|++|+||||||+....  .+.+.++|++.+++|+.++++++++++|.|.+     ++.|+||++||.++..+
T Consensus        92 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~-----~~~g~iv~isS~~~~~~  166 (277)
T 4dqx_A           92 VEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRR-----NGGGSIINTTSYTATSA  166 (277)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTT-----TTCEEEEEECCGGGTSC
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH-----cCCcEEEEECchhhCcC
Confidence            999999999999999999986542  27888999999999999999999999999987     44789999999999887


Q ss_pred             ccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-----chh---HhHH
Q 021391          177 YSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-----GIL---RGFC  248 (313)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-----~~~---~~~~  248 (313)
                      .+               +...|++||+|++.|+++++.|++++|  |+||+|+||+++|++....     ...   ..+.
T Consensus       167 ~~---------------~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  229 (277)
T 4dqx_A          167 IA---------------DRTAYVASKGAISSLTRAMAMDHAKEG--IRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFN  229 (277)
T ss_dssp             CT---------------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHH
T ss_pred             CC---------------CChhHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcCcCchhhhhcccccchhHHHHHHH
Confidence            66               678999999999999999999999999  9999999999999973321     111   1123


Q ss_pred             HHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCCc
Q 021391          249 NTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNS  293 (313)
Q Consensus       249 ~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~  293 (313)
                      ...+..+..+|+|+|++++||++ +.+.++||+.+.+||+.....
T Consensus       230 ~~~~~~r~~~pedvA~~v~~L~s-~~~~~itG~~i~vdGG~~~~~  273 (277)
T 4dqx_A          230 ARAVMDRMGTAEEIAEAMLFLAS-DRSRFATGSILTVDGGSSIGN  273 (277)
T ss_dssp             TTSTTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESSSSSSCC
T ss_pred             hcCcccCCcCHHHHHHHHHHHhC-CccCCCcCCEEEECCchhhhh
Confidence            33445667899999999999998 788999999999988776554

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=1.9e-45  Score=326.33  Aligned_cols=241  Identities=22%  Similarity=0.284  Sum_probs=210.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      ...++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++...  +.++.++++|++|+++++++++++.
T Consensus         6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (264)
T 3ucx_A            6 GGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT--GRRALSVGTDITDDAQVAHLVDETM   83 (264)
T ss_dssp             -CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            34589999999999999999999999999999999999999999988888765  5689999999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCC--CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          104 SQGRPLNILINNAGIMAS--PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      +++|++|+||||||....  +. +.+.++|++.+++|+.++++++++++|.|.+.      +|+||++||..+..+.+  
T Consensus        84 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~~--  155 (264)
T 3ucx_A           84 KAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEES------KGAVVNVNSMVVRHSQA--  155 (264)
T ss_dssp             HHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH------TCEEEEECCGGGGCCCT--
T ss_pred             HHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc------CCEEEEECcchhccCCC--
Confidence            999999999999998532  33 78889999999999999999999999999873      48999999999988766  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc-------------hhHhH
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG-------------ILRGF  247 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~-------------~~~~~  247 (313)
                                   ++..|++||++++.|+++++.|++++|  ||||+|+||+++|++.....             +...+
T Consensus       156 -------------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  220 (264)
T 3ucx_A          156 -------------KYGAYKMAKSALLAMSQTLATELGEKG--IRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAA  220 (264)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred             -------------ccHHHHHHHHHHHHHHHHHHHHhCccC--eEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHH
Confidence                         678999999999999999999999999  99999999999999865321             11122


Q ss_pred             HHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          248 CNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       248 ~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      ....+..+..+|+|+|++++||++ +.+.++||+.|.+||+..
T Consensus       221 ~~~~p~~r~~~p~dvA~~v~~L~s-~~~~~itG~~i~vdGG~~  262 (264)
T 3ucx_A          221 AAGSDLKRLPTEDEVASAILFMAS-DLASGITGQALDVNCGEY  262 (264)
T ss_dssp             HTTSSSSSCCBHHHHHHHHHHHHS-GGGTTCCSCEEEESTTSS
T ss_pred             hccCCcccCCCHHHHHHHHHHHcC-ccccCCCCCEEEECCCcc
Confidence            223345567899999999999998 888999999999887653

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=3.4e-45  Score=330.48  Aligned_cols=244  Identities=17%  Similarity=0.168  Sum_probs=209.0

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecC------------chhHHHHHHHHHHhCCCCceEEEEccC
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRN------------MAAGKDVREAIVKEIPSAKVDAMELDV   89 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~D~   89 (313)
                      .+..+++||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++...  +.++.++++|+
T Consensus        21 ~m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv   98 (299)
T 3t7c_A           21 SMAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL--GRRIIASQVDV   98 (299)
T ss_dssp             -CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCT
T ss_pred             ccccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhc--CCceEEEECCC
Confidence            35567899999999999999999999999999999999987            56677777777654  56899999999


Q ss_pred             CCHHHHHHHHHHHhhcCCCeeEEEEcccCCCCC--C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEE
Q 021391           90 SSLASVRKFASEYNSQGRPLNILINNAGIMASP--F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIV  166 (313)
Q Consensus        90 s~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~--~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv  166 (313)
                      +|+++++++++++.+++|++|+||||||+....  . +.+.++|++.+++|+.++++++++++|.|.+.    +..|+||
T Consensus        99 ~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~----~~~g~Iv  174 (299)
T 3t7c_A           99 RDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAG----KRGGSIV  174 (299)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT----TSCEEEE
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc----CCCcEEE
Confidence            999999999999999999999999999986542  3 67899999999999999999999999999873    2368999


Q ss_pred             EECCccccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchh--
Q 021391          167 NVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGIL--  244 (313)
Q Consensus       167 ~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~--  244 (313)
                      ++||.++..+.+               ....|++||+|+++|+++++.|++++|  |+||+|+||+++|++.......  
T Consensus       175 ~isS~~~~~~~~---------------~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~  237 (299)
T 3t7c_A          175 FTSSIGGLRGAE---------------NIGNYIASKHGLHGLMRTMALELGPRN--IRVNIVCPSSVATPMLLNEPTYRM  237 (299)
T ss_dssp             EECCGGGTSCCT---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCBSSTTTSSHHHHHH
T ss_pred             EECChhhccCCC---------------CcchHHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCCccCccccccchhhh
Confidence            999999988766               678999999999999999999999999  9999999999999997642110  


Q ss_pred             ----------HhH------HHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          245 ----------RGF------CNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       245 ----------~~~------~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                                ...      ....+ .+..+|+|+|++++||++ +.+.++||+.|.+||+..
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~p-~r~~~pedvA~~v~fL~s-~~a~~itG~~i~vdGG~~  297 (299)
T 3t7c_A          238 FRPDLENPTVEDFQVASRQMHVLP-IPYVEPADISNAILFLVS-DDARYITGVSLPVDGGAL  297 (299)
T ss_dssp             HCTTSSSCCHHHHHHHHHHHSSSS-CSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             hhhhhccchhhHHHHHhhhhcccC-cCCCCHHHHHHHHHHHhC-cccccCcCCEEeeCCCcc
Confidence                      110      01111 346799999999999998 888999999999888754

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.6e-45  Score=329.03  Aligned_cols=242  Identities=25%  Similarity=0.252  Sum_probs=208.8

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      ++.++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|++|++++++++++
T Consensus        22 m~~~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~   96 (277)
T 3gvc_A           22 MNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI-----GCGAAACRVDVSDEQQIIAMVDA   96 (277)
T ss_dssp             -----CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----CSSCEEEECCTTCHHHHHHHHHH
T ss_pred             CCccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCcceEEEecCCCHHHHHHHHHH
Confidence            4556799999999999999999999999999999999999998888777665     55789999999999999999999


Q ss_pred             HhhcCCCeeEEEEcccCCCC-CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccC
Q 021391          102 YNSQGRPLNILINNAGIMAS-PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSE  179 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~~~-~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~  179 (313)
                      +.+++|++|+||||||+... +. +.+.++|++.+++|+.++++++++++|.|.+     ++.|+||++||.++..+.+ 
T Consensus        97 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-----~~~g~Iv~isS~~~~~~~~-  170 (277)
T 3gvc_A           97 CVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIE-----RGGGAIVNLSSLAGQVAVG-  170 (277)
T ss_dssp             HHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----TTCEEEEEECCGGGTSCCT-
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-----cCCcEEEEEcchhhccCCC-
Confidence            99999999999999998754 22 7889999999999999999999999999988     4579999999999988766 


Q ss_pred             CCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc------chhHhHHH---H
Q 021391          180 GIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN------GILRGFCN---T  250 (313)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~------~~~~~~~~---~  250 (313)
                                    +...|++||+|++.|+++++.|++++|  |+||+|+||+++|++....      ........   .
T Consensus       171 --------------~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  234 (277)
T 3gvc_A          171 --------------GTGAYGMSKAGIIQLSRITAAELRSSG--IRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIA  234 (277)
T ss_dssp             --------------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHHHTCC------CCHHHHHH
T ss_pred             --------------CchhHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhh
Confidence                          678999999999999999999999999  9999999999999975432      11111122   4


Q ss_pred             HHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          251 VGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       251 ~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      .+..+..+|+|+|++++||++ +.+.++||+.+.+||+...
T Consensus       235 ~~~~r~~~pedvA~~v~~L~s-~~a~~itG~~i~vdGG~~~  274 (277)
T 3gvc_A          235 RLQGRMAAPEEMAGIVVFLLS-DDASMITGTTQIADGGTIA  274 (277)
T ss_dssp             HHHSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             ccccCCCCHHHHHHHHHHHcC-CccCCccCcEEEECCcchh
Confidence            456778899999999999998 8889999999998887654

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=2.5e-45  Score=329.11  Aligned_cols=243  Identities=20%  Similarity=0.197  Sum_probs=207.9

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecC----------------chhHHHHHHHHHHhCCCCceEEEE
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRN----------------MAAGKDVREAIVKEIPSAKVDAME   86 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~----------------~~~~~~~~~~l~~~~~~~~~~~~~   86 (313)
                      +..+++||++|||||++|||+++|++|+++|++|++++|+                .+.+++..+++...  +.++.++.
T Consensus         5 m~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~   82 (286)
T 3uve_A            5 MTGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH--NRRIVTAE   82 (286)
T ss_dssp             -CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT--TCCEEEEE
T ss_pred             CCcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhc--CCceEEEE
Confidence            4456899999999999999999999999999999999987                56666666666544  56899999


Q ss_pred             ccCCCHHHHHHHHHHHhhcCCCeeEEEEcccCCCCC--C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCC
Q 021391           87 LDVSSLASVRKFASEYNSQGRPLNILINNAGIMASP--F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREG  163 (313)
Q Consensus        87 ~D~s~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~--~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g  163 (313)
                      +|++|+++++++++++.+++|++|+||||||+....  . +.+.++|++++++|+.++++++++++|+|.+.    ..+|
T Consensus        83 ~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~----~~~g  158 (286)
T 3uve_A           83 VDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAG----GRGG  158 (286)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TSCE
T ss_pred             cCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC----CCCc
Confidence            999999999999999999999999999999986542  3 67889999999999999999999999999884    2368


Q ss_pred             eEEEECCccccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccch
Q 021391          164 RIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI  243 (313)
Q Consensus       164 ~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~  243 (313)
                      +||++||..+..+.+               +...|++||+|+++|+++++.|++++|  ||||+|+||+++|++......
T Consensus       159 ~iv~isS~~~~~~~~---------------~~~~Y~asKaa~~~~~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~  221 (286)
T 3uve_A          159 SIILTSSVGGLKAYP---------------HTGHYVAAKHGVVGLMRAFGVELGQHM--IRVNSVHPTHVKTPMLHNEGT  221 (286)
T ss_dssp             EEEEECCGGGTSCCT---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBSSTTTSSHHH
T ss_pred             EEEEECchhhccCCC---------------CccHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCcccCCcccccch
Confidence            999999999988766               678999999999999999999999999  999999999999999764211


Q ss_pred             h------------HhHH------HHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          244 L------------RGFC------NTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       244 ~------------~~~~------~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      .            ....      ...+ .+..+|+|+|++++||++ +.+.++||+.|.+||+..
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~p-~r~~~p~dvA~~v~fL~s-~~a~~itG~~i~vdGG~~  284 (286)
T 3uve_A          222 FKMFRPDLENPGPDDMAPICQMFHTLP-IPWVEPIDISNAVLFFAS-DEARYITGVTLPIDAGSC  284 (286)
T ss_dssp             HHHHCTTSSSCCHHHHHHHHHTTCSSS-CSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             hhhccccccccchhhHHHHHHhhhccC-CCcCCHHHHHHHHHHHcC-ccccCCcCCEEeECCccc
Confidence            0            0000      1112 456799999999999998 889999999999888754

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=2.4e-45  Score=324.38  Aligned_cols=244  Identities=19%  Similarity=0.177  Sum_probs=212.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++...  +.++.++.+|++|+++++++++++.++
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF--PGQILTVQMDVRNTDDIQKMIEQIDEK   80 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS--TTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999999988888777543  457999999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCC-CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          106 GRPLNILINNAGIMAS-PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~-~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      +|++|+||||||+... +. +.+.++|++.+++|+.+++++++++.|+|.+.    +..|+||++||..+..+.+     
T Consensus        81 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~----~~~g~iv~isS~~~~~~~~-----  151 (257)
T 3imf_A           81 FGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEK----GIKGNIINMVATYAWDAGP-----  151 (257)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----TCCCEEEEECCGGGGSCCT-----
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhh----CCCcEEEEECchhhccCCC-----
Confidence            9999999999997654 22 78899999999999999999999999999653    4478999999999988766     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhc-cCCCcEEEEEeeCcccccCCcccc-----chhHhHHHHHHHhhcC
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLK-EDGVNITANSLHPGSIVTNLFRYN-----GILRGFCNTVGKLVLK  257 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~-~~g~~I~vn~i~PG~v~t~~~~~~-----~~~~~~~~~~~~~~~~  257 (313)
                                +...|++||+|++.|+++++.|++ ++|  ||||+|+||+++|++....     ..........+..+..
T Consensus       152 ----------~~~~Y~asKaa~~~l~~~la~e~~~~~g--Irvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~  219 (257)
T 3imf_A          152 ----------GVIHSAAAKAGVLAMTKTLAVEWGRKYG--IRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLG  219 (257)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHHHHHC--CEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCB
T ss_pred             ----------CcHHHHHHHHHHHHHHHHHHHHhccccC--eEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCc
Confidence                      678999999999999999999997 778  9999999999999975432     2233344455666788


Q ss_pred             ChHHHHHHHHHHHccCCccCCCceeecCCcccCCCc
Q 021391          258 NIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNS  293 (313)
Q Consensus       258 ~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~  293 (313)
                      +|+|+|++++||++ +.+.++||+.+.+||+.....
T Consensus       220 ~pedvA~~v~~L~s-~~~~~itG~~i~vdGG~~~~~  254 (257)
T 3imf_A          220 TPEEIAGLAYYLCS-DEAAYINGTCMTMDGGQHLHQ  254 (257)
T ss_dssp             CHHHHHHHHHHHHS-GGGTTCCSCEEEESTTTTSCC
T ss_pred             CHHHHHHHHHHHcC-chhcCccCCEEEECCCcccCC
Confidence            99999999999998 888999999999888776543

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=2.4e-45  Score=327.92  Aligned_cols=245  Identities=20%  Similarity=0.167  Sum_probs=213.8

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      ....+++||++|||||++|||+++|++|+++|++|++++|+.++.++..+++.... +.++.++.+|++|++++++++++
T Consensus        20 ~~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~   98 (277)
T 4fc7_A           20 FCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGAT-GRRCLPLSMDVRAPPAVMAAVDQ   98 (277)
T ss_dssp             BCTTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHH
Confidence            34455899999999999999999999999999999999999998888888876543 45799999999999999999999


Q ss_pred             HhhcCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccC
Q 021391          102 YNSQGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSE  179 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~  179 (313)
                      +.+++|++|+||||||+.... . +.+.++|++.+++|+.++++++++++|.|.+.     +.|+||++||.++..+.+ 
T Consensus        99 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~-  172 (277)
T 4fc7_A           99 ALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRD-----HGGVIVNITATLGNRGQA-  172 (277)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH-----HCEEEEEECCSHHHHTCT-
T ss_pred             HHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCCEEEEECchhhCCCCC-
Confidence            999999999999999976542 2 78899999999999999999999999999873     378999999999988766 


Q ss_pred             CCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccc-----cchhHhHHHHHHHh
Q 021391          180 GIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY-----NGILRGFCNTVGKL  254 (313)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~-----~~~~~~~~~~~~~~  254 (313)
                                    ....|++||+|++.|+++++.|++++|  ||||+|+||+++|++...     ...........+..
T Consensus       173 --------------~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~  236 (277)
T 4fc7_A          173 --------------LQVHAGSAKAAVDAMTRHLAVEWGPQN--IRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQ  236 (277)
T ss_dssp             --------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTS
T ss_pred             --------------CcHHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCC
Confidence                          678999999999999999999999999  999999999999985321     12223344455667


Q ss_pred             hcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          255 VLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       255 ~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      +..+|+|+|++++||++ +.+.++||+.+.+||+..
T Consensus       237 r~~~p~dvA~~v~fL~s-~~~~~itG~~i~vdGG~~  271 (277)
T 4fc7_A          237 RLGNKTEIAHSVLYLAS-PLASYVTGAVLVADGGAW  271 (277)
T ss_dssp             SCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTHH
T ss_pred             CCcCHHHHHHHHHHHcC-CccCCcCCCEEEECCCcc
Confidence            78899999999999998 888999999999887653

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=2.6e-45  Score=327.55  Aligned_cols=243  Identities=20%  Similarity=0.186  Sum_probs=207.1

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEec-------------CchhHHHHHHHHHHhCCCCceEEEEccC
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVR-------------NMAAGKDVREAIVKEIPSAKVDAMELDV   89 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r-------------~~~~~~~~~~~l~~~~~~~~~~~~~~D~   89 (313)
                      +..+++||++|||||++|||+++|++|+++|++|++++|             +.+.+++..+++...  +.++.++.+|+
T Consensus         5 m~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~   82 (277)
T 3tsc_A            5 MAGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA--NRRIVAAVVDT   82 (277)
T ss_dssp             --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCT
T ss_pred             cccccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc--CCeEEEEECCC
Confidence            445789999999999999999999999999999999998             566677777666654  56899999999


Q ss_pred             CCHHHHHHHHHHHhhcCCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEE
Q 021391           90 SSLASVRKFASEYNSQGRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVN  167 (313)
Q Consensus        90 s~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~  167 (313)
                      +|+++++++++++.+++|++|+||||||+.....  +.+.++|++.+++|+.++++++++++|.|.+.    ..+|+||+
T Consensus        83 ~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~----~~~g~iv~  158 (277)
T 3tsc_A           83 RDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEG----GRGGSIIL  158 (277)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TSCEEEEE
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhc----CCCCEEEE
Confidence            9999999999999999999999999999876533  78899999999999999999999999999884    23689999


Q ss_pred             ECCccccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhH--
Q 021391          168 VSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILR--  245 (313)
Q Consensus       168 isS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~--  245 (313)
                      +||.++..+.+               +...|++||+|++.|+++++.|++++|  ||||+|+||+++|++........  
T Consensus       159 isS~~~~~~~~---------------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~  221 (277)
T 3tsc_A          159 ISSAAGMKMQP---------------FMIHYTASKHAVTGLARAFAAELGKHS--IRVNSVHPGPVNTPMGSGDMVTAVG  221 (277)
T ss_dssp             ECCGGGTSCCS---------------SCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBSSGGGSHHHHHHHH
T ss_pred             EccHhhCCCCC---------------CchhhHHHHHHHHHHHHHHHHHhCccC--eEEEEEEeCCCcCCcccchhhhhhh
Confidence            99999988766               678999999999999999999999999  99999999999999875421000  


Q ss_pred             -----------hHHHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          246 -----------GFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       246 -----------~~~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                                 .+....+ .+..+|+|+|++++||++ +.+.++||+.|.+||+..
T Consensus       222 ~~~~~~~~~~~~~~~~~p-~r~~~pedvA~~v~~L~s-~~~~~itG~~i~vdGG~~  275 (277)
T 3tsc_A          222 QAMETNPQLSHVLTPFLP-DWVAEPEDIADTVCWLAS-DESRKVTAAQIPVDQGST  275 (277)
T ss_dssp             HHHHTCGGGTTTTCCSSS-CSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             hcccccHHHHHHhhhccC-CCCCCHHHHHHHHHHHhC-ccccCCcCCEEeeCCCcc
Confidence                       0001111 246799999999999998 888999999999887653

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.5e-45  Score=325.90  Aligned_cols=244  Identities=25%  Similarity=0.291  Sum_probs=213.0

Q ss_pred             chhccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc-hhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHH
Q 021391           19 EEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM-AAGKDVREAIVKEIPSAKVDAMELDVSSLASVRK   97 (313)
Q Consensus        19 ~~~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~   97 (313)
                      +.++..++++||++|||||++|||+++|++|+++|++|++++++. +..++..+++...  +.++.++.+|++|++++++
T Consensus        21 ~~mm~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~   98 (271)
T 3v2g_A           21 QSMMTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA--GGRAVAIRADNRDAEAIEQ   98 (271)
T ss_dssp             HHHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHH
T ss_pred             hhhccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHH
Confidence            456677889999999999999999999999999999999997654 6677777777654  5679999999999999999


Q ss_pred             HHHHHhhcCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccc
Q 021391           98 FASEYNSQGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRF  175 (313)
Q Consensus        98 ~~~~~~~~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~  175 (313)
                      +++++.+++|++|+||||||+.... . +.+.++|++.+++|+.+++++++++.|.|.+       .|+||++||..+..
T Consensus        99 ~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~-------~g~iv~isS~~~~~  171 (271)
T 3v2g_A           99 AIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD-------GGRIITIGSNLAEL  171 (271)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT-------TCEEEEECCGGGTC
T ss_pred             HHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-------CCEEEEEeChhhcc
Confidence            9999999999999999999987543 2 7889999999999999999999999999865       68999999987654


Q ss_pred             c-ccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-chhHhHHHHHHH
Q 021391          176 A-YSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-GILRGFCNTVGK  253 (313)
Q Consensus       176 ~-~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-~~~~~~~~~~~~  253 (313)
                      + .+               +...|++||+|++.|+++++.|++++|  ||||+|+||+++|++.... ..........+.
T Consensus       172 ~~~~---------------~~~~Y~asKaa~~~l~~~la~e~~~~g--Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  234 (271)
T 3v2g_A          172 VPWP---------------GISLYSASKAALAGLTKGLARDLGPRG--ITVNIVHPGSTDTDMNPADGDHAEAQRERIAT  234 (271)
T ss_dssp             CCST---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSSSSCSSCSSHHHHHHTCTT
T ss_pred             CCCC---------------CchHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEecCCCcCCcccccchhHHHHHhcCCC
Confidence            4 34               678999999999999999999999999  9999999999999987654 233444555667


Q ss_pred             hhcCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          254 LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       254 ~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      .+..+|+|+|+.++||++ +.+.++||+.+.+||+.
T Consensus       235 ~r~~~pedvA~~v~fL~s-~~~~~itG~~i~vdGG~  269 (271)
T 3v2g_A          235 GSYGEPQDIAGLVAWLAG-PQGKFVTGASLTIDGGA  269 (271)
T ss_dssp             SSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTT
T ss_pred             CCCCCHHHHHHHHHHHhC-cccCCccCCEEEeCcCc
Confidence            778899999999999998 88999999999988764

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=1e-45  Score=328.60  Aligned_cols=244  Identities=27%  Similarity=0.318  Sum_probs=200.2

Q ss_pred             chhccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEe-cCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHH
Q 021391           19 EEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAV-RNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRK   97 (313)
Q Consensus        19 ~~~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~   97 (313)
                      ......|.++||++|||||++|||+++|++|+++|++|++++ |+.+..++..+++...  +.++.++.+|++|++++++
T Consensus        17 ~~~~~~m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~   94 (267)
T 3u5t_A           17 NLYFQSMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAA--GGKALTAQADVSDPAAVRR   94 (267)
T ss_dssp             ----------CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHH
T ss_pred             cccccccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHH
Confidence            333455678999999999999999999999999999999985 5666677777777654  5679999999999999999


Q ss_pred             HHHHHhhcCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccc
Q 021391           98 FASEYNSQGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRF  175 (313)
Q Consensus        98 ~~~~~~~~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~  175 (313)
                      +++++.+.+|++|+||||||+.... . +.+.++|++.+++|+.++++++++++|.|.+       +|+||++||..+..
T Consensus        95 ~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~-------~g~iv~isS~~~~~  167 (267)
T 3u5t_A           95 LFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV-------GGRIINMSTSQVGL  167 (267)
T ss_dssp             HHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCTHHHH
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------CCeEEEEeChhhcc
Confidence            9999999999999999999987543 2 7788999999999999999999999999965       58999999999887


Q ss_pred             cccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc---chhHhHHHHHH
Q 021391          176 AYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN---GILRGFCNTVG  252 (313)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~---~~~~~~~~~~~  252 (313)
                      +.+               +...|++||+|++.|+++++.|++++|  ||||+|+||+++|++....   .....+....+
T Consensus       168 ~~~---------------~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p  230 (267)
T 3u5t_A          168 LHP---------------SYGIYAAAKAGVEAMTHVLSKELRGRD--ITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAP  230 (267)
T ss_dssp             CCT---------------TCHHHHHHHHHHHHHHHHHHHHTTTSC--CEEEEEEECCBC-----------CHHHHHTSST
T ss_pred             CCC---------------CchHHHHHHHHHHHHHHHHHHHhhhhC--CEEEEEEECCCcCccccccCCHHHHHHHHhcCC
Confidence            766               678999999999999999999999999  9999999999999987542   22233344455


Q ss_pred             HhhcCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          253 KLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       253 ~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      ..+..+|+|+|++++||++ +.+.++||+.+.+||+.
T Consensus       231 ~~r~~~pedvA~~v~~L~s-~~~~~itG~~i~vdGG~  266 (267)
T 3u5t_A          231 LERLGTPQDIAGAVAFLAG-PDGAWVNGQVLRANGGI  266 (267)
T ss_dssp             TCSCBCHHHHHHHHHHHHS-TTTTTCCSEEEEESSSC
T ss_pred             CCCCcCHHHHHHHHHHHhC-ccccCccCCEEEeCCCc
Confidence            6678899999999999998 88999999999988764

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=6.1e-45  Score=324.69  Aligned_cols=245  Identities=24%  Similarity=0.268  Sum_probs=209.0

Q ss_pred             chhccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHH
Q 021391           19 EEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKF   98 (313)
Q Consensus        19 ~~~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~   98 (313)
                      +.+...++++||++|||||++|||+++|++|+++|++|++++|+ +..++..+++...  +.++.++.+|++|+++++++
T Consensus        21 ~~m~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~   97 (273)
T 3uf0_A           21 QSMTGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADG--GGSAEAVVADLADLEGAANV   97 (273)
T ss_dssp             ----CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTT--TCEEEEEECCTTCHHHHHHH
T ss_pred             hhcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHH
Confidence            34556788999999999999999999999999999999999966 5566666666554  56899999999999999999


Q ss_pred             HHHHhhcCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccc
Q 021391           99 ASEYNSQGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFA  176 (313)
Q Consensus        99 ~~~~~~~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~  176 (313)
                      .+. .++++++|+||||||+.... . +.+.++|++.+++|+.++++++++++|.|.++     ..|+||++||.++..+
T Consensus        98 ~~~-~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~IV~isS~~~~~~  171 (273)
T 3uf0_A           98 AEE-LAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAH-----GSGRIVTIASMLSFQG  171 (273)
T ss_dssp             HHH-HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSC
T ss_pred             HHH-HHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCEEEEEcchHhcCC
Confidence            554 45568999999999987543 2 77899999999999999999999999999883     3789999999999887


Q ss_pred             ccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----chhHhHHHHHH
Q 021391          177 YSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----GILRGFCNTVG  252 (313)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~  252 (313)
                      .+               +...|++||+|++.|+++++.|++++|  ||||+|+||+++|++....    .....+....+
T Consensus       172 ~~---------------~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p  234 (273)
T 3uf0_A          172 GR---------------NVAAYAASKHAVVGLTRALASEWAGRG--VGVNALAPGYVVTANTAALRADDERAAEITARIP  234 (273)
T ss_dssp             CS---------------SCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHST
T ss_pred             CC---------------CChhHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCC
Confidence            66               678999999999999999999999999  9999999999999986543    22334455566


Q ss_pred             HhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          253 KLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       253 ~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      ..+..+|+|+|++++||++ +.+.++||+.|.+||+..
T Consensus       235 ~~r~~~pedva~~v~~L~s-~~a~~itG~~i~vdGG~~  271 (273)
T 3uf0_A          235 AGRWATPEDMVGPAVFLAS-DAASYVHGQVLAVDGGWL  271 (273)
T ss_dssp             TSSCBCGGGGHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             CCCCCCHHHHHHHHHHHhC-chhcCCcCCEEEECcCcc
Confidence            6778899999999999998 888999999999887754

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=7.2e-45  Score=325.30  Aligned_cols=244  Identities=23%  Similarity=0.225  Sum_probs=206.5

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecC------------chhHHHHHHHHHHhCCCCceEEEEccCC
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRN------------MAAGKDVREAIVKEIPSAKVDAMELDVS   90 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~D~s   90 (313)
                      ++++++||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++...  +.++.++++|++
T Consensus         4 ~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~   81 (281)
T 3s55_A            4 SMADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT--GRRCISAKVDVK   81 (281)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTT
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhc--CCeEEEEeCCCC
Confidence            4567899999999999999999999999999999999997            45566666655554  568999999999


Q ss_pred             CHHHHHHHHHHHhhcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEE
Q 021391           91 SLASVRKFASEYNSQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNV  168 (313)
Q Consensus        91 ~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~i  168 (313)
                      |+++++++++++.+++|++|+||||||+....  .+.+.++|++.+++|+.++++++++++|+|.+.     +.|+||++
T Consensus        82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~i  156 (281)
T 3s55_A           82 DRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKR-----NYGRIVTV  156 (281)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEE
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEE
Confidence            99999999999999999999999999987543  278899999999999999999999999999883     47899999


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----h-
Q 021391          169 SSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----I-  243 (313)
Q Consensus       169 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----~-  243 (313)
                      ||.++..+.+               +...|++||+|++.|+++++.|++++|  ||||+|+||+++|++.....    + 
T Consensus       157 sS~~~~~~~~---------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~  219 (281)
T 3s55_A          157 SSMLGHSANF---------------AQASYVSSKWGVIGLTKCAAHDLVGYG--ITVNAVAPGNIETPMTHNDFVFGTMR  219 (281)
T ss_dssp             CCGGGGSCCT---------------TCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEECSBCSTTTSSHHHHHC--
T ss_pred             CChhhcCCCC---------------CCchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEecCcccCccccchhhhcccc
Confidence            9999988766               678999999999999999999999999  99999999999999876421    0 


Q ss_pred             -------hHhHHH---H--HHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          244 -------LRGFCN---T--VGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       244 -------~~~~~~---~--~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                             ......   .  ....+..+|+|+|++++||++ +.+.++||+.+.+||+...
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s-~~~~~itG~~i~vdgG~~~  278 (281)
T 3s55_A          220 PDLEKPTLKDVESVFASLHLQYAPFLKPEEVTRAVLFLVD-EASSHITGTVLPIDAGATA  278 (281)
T ss_dssp             -----CCHHHHHHHHHHHCSSSCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             ccccccchhHHHHHHHhhhccCcCCCCHHHHHHHHHHHcC-CcccCCCCCEEEECCCccc
Confidence                   000000   0  011356789999999999998 7889999999998877543

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=2.6e-45  Score=323.91  Aligned_cols=236  Identities=26%  Similarity=0.290  Sum_probs=207.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|++|+++++++++++.+
T Consensus         4 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (255)
T 4eso_A            4 GNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRVHALRSDIADLNEIAVLGAAAGQ   78 (255)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHH
Confidence            3589999999999999999999999999999999999998888777665     45789999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCC-CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          105 QGRPLNILINNAGIMAS-PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~-~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      .+|++|+||||||+... +. +.+.++|++.+++|+.++++++++++|+|.+       +|+||++||.++..+.+    
T Consensus        79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~----  147 (255)
T 4eso_A           79 TLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE-------GGSIVFTSSVADEGGHP----  147 (255)
T ss_dssp             HHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEECCGGGSSBCT----
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc-------CCEEEEECChhhcCCCC----
Confidence            99999999999998754 22 7789999999999999999999999999865       58999999999988776    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--------hhHhHHHHHHHh
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--------ILRGFCNTVGKL  254 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--------~~~~~~~~~~~~  254 (313)
                                 +...|++||+|++.|+++++.|++++|  ||||+|+||+++|++.....        +........+..
T Consensus       148 -----------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~  214 (255)
T 4eso_A          148 -----------GMSVYSASKAALVSFASVLAAELLPRG--IRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMK  214 (255)
T ss_dssp             -----------TBHHHHHHHHHHHHHHHHHHHHTGGGT--CEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTS
T ss_pred             -----------CchHHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCC
Confidence                       778999999999999999999999999  99999999999999865421        111223344566


Q ss_pred             hcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          255 VLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       255 ~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      +..+|+|+|++++||++ + +.++||+.+.+||+...
T Consensus       215 r~~~pedvA~~v~~L~s-~-~~~itG~~i~vdGG~~~  249 (255)
T 4eso_A          215 RNGTADEVARAVLFLAF-E-ATFTTGAKLAVDGGLGQ  249 (255)
T ss_dssp             SCBCHHHHHHHHHHHHH-T-CTTCCSCEEEESTTTTT
T ss_pred             CCcCHHHHHHHHHHHcC-c-CcCccCCEEEECCCccc
Confidence            77899999999999998 6 89999999998877654

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=4.9e-45  Score=320.36  Aligned_cols=238  Identities=25%  Similarity=0.278  Sum_probs=209.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEec-CchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVR-NMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      +.+|++|||||++|||+++|++|+++|++|++++| +.+..++..+++...  +.++.++++|++|+++++++++++.++
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~   79 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK--GVDSFAIQANVADADEVKAMIKEVVSQ   79 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999887 556777777777665  567899999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          106 GRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      +|++|+||||||+....  .+.+.++|++.+++|+.++++++++++|+|.++     +.|+||++||.++..+.+     
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~-----  149 (246)
T 3osu_A           80 FGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQ-----RSGAIINLSSVVGAVGNP-----  149 (246)
T ss_dssp             HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHHCCT-----
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCCEEEEEcchhhcCCCC-----
Confidence            99999999999987543  277899999999999999999999999999883     478999999999988776     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHHHHHHhhcCChHH
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCNTVGKLVLKNIPQ  261 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~e  261 (313)
                                +...|++||+|++.++++++.|++++|  |+||+|+||+++|++.....  ....+....+..+..+|+|
T Consensus       150 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~d  217 (246)
T 3osu_A          150 ----------GQANYVATKAGVIGLTKSAARELASRG--ITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTD  217 (246)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBGGGCCSCSCHHHHHHHHTTCTTCSCBCHHH
T ss_pred             ----------CChHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEECCCcCCcccccCHHHHHHHHhcCCCCCCcCHHH
Confidence                      678999999999999999999999999  99999999999999876542  2233334455667789999


Q ss_pred             HHHHHHHHHccCCccCCCceeecCCccc
Q 021391          262 GAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       262 va~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      +|++++||++ +.+.++||+.+.+||+.
T Consensus       218 va~~v~~l~s-~~~~~itG~~i~vdgG~  244 (246)
T 3osu_A          218 IANTVAFLAS-DKAKYITGQTIHVNGGM  244 (246)
T ss_dssp             HHHHHHHHTS-GGGTTCCSCEEEESTTS
T ss_pred             HHHHHHHHhC-ccccCCCCCEEEeCCCc
Confidence            9999999998 78899999999988764

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=4.2e-45  Score=328.47  Aligned_cols=268  Identities=38%  Similarity=0.520  Sum_probs=215.6

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      .+.++++||++|||||++|||+++|++|+++|++|++++|+.++.++..+++     +.++.++.+|++|.+++++++++
T Consensus         9 ~~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~v~~~~~~   83 (291)
T 3rd5_A            9 ADLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-----AGQVEVRELDLQDLSSVRRFADG   83 (291)
T ss_dssp             GGCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS-----SSEEEEEECCTTCHHHHHHHHHT
T ss_pred             hhccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----cCCeeEEEcCCCCHHHHHHHHHh
Confidence            4567799999999999999999999999999999999999988877665544     45899999999999999999887


Q ss_pred             HhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          102 YNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      +    +++|+||||||+.....+.+.+++++++++|+.++++++++++|.|.+         +||++||.++..+.+   
T Consensus        84 ~----~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---------riv~isS~~~~~~~~---  147 (291)
T 3rd5_A           84 V----SGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD---------RVVTVSSMAHWPGRI---  147 (291)
T ss_dssp             C----CCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE---------EEEEECCGGGTTCCC---
T ss_pred             c----CCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------heeEeechhhccCCC---
Confidence            6    789999999999866667889999999999999999999999999854         899999999876533   


Q ss_pred             CCCCCCC-CCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc-hhHhHHHHHHHhhc-CC
Q 021391          182 RFDKIND-ESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG-ILRGFCNTVGKLVL-KN  258 (313)
Q Consensus       182 ~~~~~~~-~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~-~~~~~~~~~~~~~~-~~  258 (313)
                      .+.++.. ...+++...|++||+|++.++++++.+++++|.+|+||+|+||+++|++.+... .........+..+. .+
T Consensus       148 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  227 (291)
T 3rd5_A          148 NLEDLNWRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMSAATRVVATD  227 (291)
T ss_dssp             CSSCTTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC--------------------CHH
T ss_pred             CcccccccccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHHHHHHHHHHHHHhCC
Confidence            2333332 355677889999999999999999999999887799999999999999987642 11111122233333 35


Q ss_pred             hHHHHHHHHHHHccCCccCCCceeecCCcccC-------CCccCCCHHHHHHHHHHHHhhhC
Q 021391          259 IPQGAATTCYVALHPQVQGVSGEYFSDSNIYK-------PNSQGQNMELAKKLWDFSMNLVK  313 (313)
Q Consensus       259 ~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~  313 (313)
                      |+|+|++++||++ +  .++||+++.+||+..       .++...|++.+++||++++++++
T Consensus       228 ~~~~A~~~~~l~~-~--~~~~G~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~  286 (291)
T 3rd5_A          228 ADFGARQTLYAAS-Q--DLPGDSFVGPRFGYLGRTQPVGRSRRAKDAGMAAALWALSEQLTK  286 (291)
T ss_dssp             HHHHHHHHHHHHH-S--CCCTTCEEEETTSSSSCEEECCCCTGGGCHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHc-C--CCCCCceeCCcccccCccccCCCCcccCCHHHHHHHHHHHHHHHc
Confidence            9999999999998 4  389999999876443       35567899999999999999864

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=3.8e-45  Score=323.75  Aligned_cols=251  Identities=16%  Similarity=0.095  Sum_probs=193.5

Q ss_pred             CCCCCCCCccchhccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEcc
Q 021391            9 PSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD   88 (313)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D   88 (313)
                      +..-++++..+....+|+++||++|||||++|||+++|++|+++|++|++++|+.++..+..++   .    ++.++.+|
T Consensus         7 ~~~~~~~~~~~~~~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~----~~~~~~~D   79 (260)
T 3gem_A            7 HHHHSSGRENLYFQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQ---A----GAVALYGD   79 (260)
T ss_dssp             --------------------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHH---H----TCEEEECC
T ss_pred             CccccccccCcccccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHh---c----CCeEEECC
Confidence            3444455555777788999999999999999999999999999999999999998765443332   2    37889999


Q ss_pred             CCCHHHHHHHHHHHhhcCCCeeEEEEcccCCCCC-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEE
Q 021391           89 VSSLASVRKFASEYNSQGRPLNILINNAGIMASP-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVN  167 (313)
Q Consensus        89 ~s~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~  167 (313)
                      ++|+++++++++++.+++|++|+||||||+.... .+.+.++|++.+++|+.++++++++++|+|.+     ++.|+||+
T Consensus        80 v~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~-----~~~g~iv~  154 (260)
T 3gem_A           80 FSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTA-----SEVADIVH  154 (260)
T ss_dssp             TTSHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHT-----SSSCEEEE
T ss_pred             CCCHHHHHHHHHHHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCcEEEE
Confidence            9999999999999999999999999999986543 36677899999999999999999999999988     44689999


Q ss_pred             ECCccccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhH
Q 021391          168 VSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGF  247 (313)
Q Consensus       168 isS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~  247 (313)
                      +||.++..+.+               +...|++||+|++.|+++++.|+++ +  ||||+|+||+++|++.....+....
T Consensus       155 isS~~~~~~~~---------------~~~~Y~asKaa~~~l~~~la~e~~~-~--Irvn~v~PG~v~t~~~~~~~~~~~~  216 (260)
T 3gem_A          155 ISDDVTRKGSS---------------KHIAYCATKAGLESLTLSFAARFAP-L--VKVNGIAPALLMFQPKDDAAYRANA  216 (260)
T ss_dssp             ECCGGGGTCCS---------------SCHHHHHHHHHHHHHHHHHHHHHTT-T--CEEEEEEECTTCC------------
T ss_pred             ECChhhcCCCC---------------CcHhHHHHHHHHHHHHHHHHHHHCC-C--CEEEEEeecccccCCCCCHHHHHHH
Confidence            99999988766               6789999999999999999999998 7  9999999999999986654444555


Q ss_pred             HHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCC
Q 021391          248 CNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPN  292 (313)
Q Consensus       248 ~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~  292 (313)
                      ....+..+..+|+|+|++++||+.   +.++||+.+.+||+...+
T Consensus       217 ~~~~p~~r~~~~edva~~v~~L~~---~~~itG~~i~vdGG~~~~  258 (260)
T 3gem_A          217 LAKSALGIEPGAEVIYQSLRYLLD---STYVTGTTLTVNGGRHVK  258 (260)
T ss_dssp             ---CCSCCCCCTHHHHHHHHHHHH---CSSCCSCEEEESTTTTTC
T ss_pred             HhcCCCCCCCCHHHHHHHHHHHhh---CCCCCCCEEEECCCcccC
Confidence            556667778899999999999994   579999999998876543

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=6e-45  Score=326.03  Aligned_cols=248  Identities=23%  Similarity=0.207  Sum_probs=204.2

Q ss_pred             chhccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEec-CchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHH
Q 021391           19 EEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVR-NMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRK   97 (313)
Q Consensus        19 ~~~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~   97 (313)
                      ......+++++|++|||||++|||+++|++|+++|++|++++| +.+..++..+++... .+.++.++.+|++|++++++
T Consensus        15 ~~n~~~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~   93 (281)
T 3v2h_A           15 TENLYFQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGL-SSGTVLHHPADMTKPSEIAD   93 (281)
T ss_dssp             -------CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTT-CSSCEEEECCCTTCHHHHHH
T ss_pred             ccchhhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhc-cCCcEEEEeCCCCCHHHHHH
Confidence            3344566789999999999999999999999999999999999 556677777766543 24579999999999999999


Q ss_pred             HHHHHhhcCCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccc
Q 021391           98 FASEYNSQGRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRF  175 (313)
Q Consensus        98 ~~~~~~~~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~  175 (313)
                      +++++.+++|++|+||||||+.....  +.+.++|++.+++|+.++++++++++|.|.+.     +.|+||++||.++..
T Consensus        94 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~  168 (281)
T 3v2h_A           94 MMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKK-----GWGRIINIASAHGLV  168 (281)
T ss_dssp             HHHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTS
T ss_pred             HHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEECCccccc
Confidence            99999999999999999999875432  77899999999999999999999999999883     478999999999988


Q ss_pred             cccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchh-----------
Q 021391          176 AYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGIL-----------  244 (313)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~-----------  244 (313)
                      +.+               +...|++||+|++.|+++++.|++++|  |+||+|+||+++|++.......           
T Consensus       169 ~~~---------------~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  231 (281)
T 3v2h_A          169 ASP---------------FKSAYVAAKHGIMGLTKTVALEVAESG--VTVNSICPGYVLTPLVEKQIPDQARTRGITEEQ  231 (281)
T ss_dssp             CCT---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCC--------------------
T ss_pred             CCC---------------CchHHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEECCCCcCcchhhhcchhhhhcCCCHHH
Confidence            766               678999999999999999999999999  9999999999999987643100           


Q ss_pred             ---HhHHHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          245 ---RGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       245 ---~~~~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                         ..+....+..+..+|+|+|++++||++ +.+.++||+.+.+||+..
T Consensus       232 ~~~~~~~~~~p~~r~~~~edvA~~v~~L~s-~~a~~itG~~i~vdGG~~  279 (281)
T 3v2h_A          232 VINEVMLKGQPTKKFITVEQVASLALYLAG-DDAAQITGTHVSMDGGWT  279 (281)
T ss_dssp             --------CCTTCSCBCHHHHHHHHHHHHS-SGGGGCCSCEEEESTTGG
T ss_pred             HHHHHHHhcCCCCCccCHHHHHHHHHHHcC-CCcCCCCCcEEEECCCcc
Confidence               012223355667899999999999998 888999999999887753

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=6.8e-45  Score=325.38  Aligned_cols=242  Identities=23%  Similarity=0.232  Sum_probs=206.9

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEec-------------CchhHHHHHHHHHHhCCCCceEEEEccC
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVR-------------NMAAGKDVREAIVKEIPSAKVDAMELDV   89 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r-------------~~~~~~~~~~~l~~~~~~~~~~~~~~D~   89 (313)
                      ...+++||++|||||++|||+++|++|+++|++|++++|             +.+.+++..+++...  +.++.++.+|+
T Consensus         9 ~~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv   86 (280)
T 3pgx_A            9 QAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ--GRKALTRVLDV   86 (280)
T ss_dssp             --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT--TCCEEEEECCT
T ss_pred             cccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc--CCeEEEEEcCC
Confidence            345789999999999999999999999999999999998             566777777766654  56899999999


Q ss_pred             CCHHHHHHHHHHHhhcCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEE
Q 021391           90 SSLASVRKFASEYNSQGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVN  167 (313)
Q Consensus        90 s~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~  167 (313)
                      +|+++++++++++.+++|++|+||||||+.... . +.+.++|++++++|+.++++++++++|+|.+.    +.+|+||+
T Consensus        87 ~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~----~~~g~iv~  162 (280)
T 3pgx_A           87 RDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEA----GNGGSIVV  162 (280)
T ss_dssp             TCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----CSCEEEEE
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc----CCCCEEEE
Confidence            999999999999999999999999999987543 2 77899999999999999999999999999884    23689999


Q ss_pred             ECCccccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhH
Q 021391          168 VSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGF  247 (313)
Q Consensus       168 isS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~  247 (313)
                      +||.++..+.+               +...|++||+|++.|+++++.|++++|  |+||+|+||+++|++..........
T Consensus       163 isS~~~~~~~~---------------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~  225 (280)
T 3pgx_A          163 VSSSAGLKATP---------------GNGHYSASKHGLTALTNTLAIELGEYG--IRVNSIHPYSVETPMIEPEAMMEIF  225 (280)
T ss_dssp             ECCGGGTSCCT---------------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSTTCCHHHHHHHH
T ss_pred             EcchhhccCCC---------------CchhHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcccCcccchhhhhhhh
Confidence            99999988776               678999999999999999999999999  9999999999999987642111111


Q ss_pred             H------------HHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          248 C------------NTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       248 ~------------~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      .            ...+ .+..+|+|+|++++||++ +.+.++||+.+.+||+.
T Consensus       226 ~~~~~~~~~~~~~~~~~-~r~~~p~dvA~~v~~L~s-~~~~~itG~~i~vdGG~  277 (280)
T 3pgx_A          226 ARHPSFVHSFPPMPVQP-NGFMTADEVADVVAWLAG-DGSGTLTGTQIPVDKGA  277 (280)
T ss_dssp             HHCGGGGGGSCCBTTBC-SSCBCHHHHHHHHHHHHS-GGGTTCSSCEEEESTTG
T ss_pred             hcCchhhhhhhhcccCC-CCCCCHHHHHHHHHHHhC-ccccCCCCCEEEECCCc
Confidence            0            0111 245689999999999998 88999999999988764

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=2.3e-45  Score=328.34  Aligned_cols=239  Identities=25%  Similarity=0.264  Sum_probs=207.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      ++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++...  +.++.++.+|++|+++++++++++.+++
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   99 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA--GHDVDGSSCDVTSTDEVHAAVAAAVERF   99 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            58999999999999999999999999999999999999999888888765  5679999999999999999999999999


Q ss_pred             CCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHH--HHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          107 RPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLD--TMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       107 g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~--~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      |++|+||||||+.... . +.+.++|++.+++|+.++++++++++|  .|.+.     ..|+||++||.++..+.+    
T Consensus       100 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~-----~~g~iV~isS~~~~~~~~----  170 (279)
T 3sju_A          100 GPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREA-----GWGRIVNIASTGGKQGVM----  170 (279)
T ss_dssp             CSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHH-----TCEEEEEECCGGGTSCCT----
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhc-----CCcEEEEECChhhccCCC----
Confidence            9999999999987543 2 788899999999999999999999999  57763     368999999999988766    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-------------chhHhHHH
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-------------GILRGFCN  249 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-------------~~~~~~~~  249 (313)
                                 +...|++||+|++.|+++++.|++++|  |+||+|+||+++|++....             .....+..
T Consensus       171 -----------~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (279)
T 3sju_A          171 -----------YAAPYTASKHGVVGFTKSVGFELAKTG--ITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNA  237 (279)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHT
T ss_pred             -----------CChhHHHHHHHHHHHHHHHHHHHHhhC--cEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHh
Confidence                       678999999999999999999999999  9999999999999976531             11222333


Q ss_pred             HHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          250 TVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       250 ~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      ..+..+..+|+|+|++++||++ +.+.++||+.+.+||+..
T Consensus       238 ~~p~~r~~~pedvA~~v~~L~s-~~a~~itG~~i~vdGG~~  277 (279)
T 3sju_A          238 KIPLGRYSTPEEVAGLVGYLVT-DAAASITAQALNVCGGLG  277 (279)
T ss_dssp             TCTTSSCBCHHHHHHHHHHHTS-SGGGGCCSCEEEESTTCC
T ss_pred             cCCCCCCCCHHHHHHHHHHHhC-ccccCcCCcEEEECCCcc
Confidence            3455677899999999999998 888999999999887653

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=1.7e-45  Score=328.50  Aligned_cols=257  Identities=17%  Similarity=0.146  Sum_probs=220.3

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           26 DGTGLTAIVTGAS--SGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        26 ~~~gk~~lItGas--~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      +++||++|||||+  +|||+++|++|+++|++|++++|+.+ .++..+++....+  .+.++.+|++|+++++++++++.
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~   79 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELN--SPYVYELDVSKEEHFKSLYNSVK   79 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcC--CcEEEEcCCCCHHHHHHHHHHHH
Confidence            4789999999999  99999999999999999999999976 5555666665532  37899999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCC-----CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccc
Q 021391          104 SQGRPLNILINNAGIMAS-----PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAY  177 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~-----~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~  177 (313)
                      +++|++|+||||||+...     +. +.+.++|++.+++|+.++++++++++|.|.+       +|+||++||.++..+.
T Consensus        80 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~~  152 (275)
T 2pd4_A           80 KDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN-------GASVLTLSYLGSTKYM  152 (275)
T ss_dssp             HHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEEECGGGTSBC
T ss_pred             HHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc-------CCEEEEEecchhcCCC
Confidence            999999999999998753     33 7788999999999999999999999999864       5899999999988776


Q ss_pred             cCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccch----hHhHHHHHHH
Q 021391          178 SEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI----LRGFCNTVGK  253 (313)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~----~~~~~~~~~~  253 (313)
                      +               +...|++||++++.++++++.|++++|  |+||+|+||+++|++......    ...+....+.
T Consensus       153 ~---------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~  215 (275)
T 2pd4_A          153 A---------------HYNVMGLAKAALESAVRYLAVDLGKHH--IRVNALSAGPIRTLASSGIADFRMILKWNEINAPL  215 (275)
T ss_dssp             T---------------TCHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT
T ss_pred             C---------------CchhhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCccccchhhhccccHHHHHHHHhcCCc
Confidence            6               677899999999999999999999999  999999999999998764321    1222233445


Q ss_pred             hhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC---CCccCCCHHHHHHHHHHHHh
Q 021391          254 LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK---PNSQGQNMELAKKLWDFSMN  310 (313)
Q Consensus       254 ~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~  310 (313)
                      .+..+|+|+|+.++||++ +.+.++||+++.++|+..   +++...|++.+++||+++++
T Consensus       216 ~~~~~p~dva~~~~~l~s-~~~~~~tG~~~~vdgg~~~~~~~~~~~~~~~~~~lw~~s~~  274 (275)
T 2pd4_A          216 RKNVSLEEVGNAGMYLLS-SLSSGVSGEVHFVDAGYHVMGMGAVEEKDNKATLLWDLHKE  274 (275)
T ss_dssp             SSCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGGBSSCCCTTCTTTTCCHHHHSSC
T ss_pred             CCCCCHHHHHHHHHHHhC-ccccCCCCCEEEECCCcccCCCChhhcCcccchhhhhhhcc
Confidence            567899999999999998 778999999998776543   56777899999999999976

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-44  Score=316.62  Aligned_cols=241  Identities=24%  Similarity=0.304  Sum_probs=213.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      |++++|++|||||++|||+++|++|+++|++|++++|+.+..++..+++...  +.++.++.+|++|+++++++++++.+
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (247)
T 3lyl_A            1 MSLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK--GFKARGLVLNISDIESIQNFFAEIKA   78 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999999988888888765  55799999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          105 QGRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      +++++|+||||||+.....  +.+.++|++.+++|+.+++++++.++|.|.+.     +.++||++||.++..+.+    
T Consensus        79 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~----  149 (247)
T 3lyl_A           79 ENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKK-----RWGRIISIGSVVGSAGNP----  149 (247)
T ss_dssp             TTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCTHHHHCCT----
T ss_pred             HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCeEEEEEcchhhccCCC----
Confidence            9999999999999875533  77889999999999999999999999999883     468999999999988766    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHHHHHHhhcCChH
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCNTVGKLVLKNIP  260 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~  260 (313)
                                 +...|++||+|++.++++++.|++++|  |+||+|+||+++|++.+...  ....+....+..+..+|+
T Consensus       150 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (247)
T 3lyl_A          150 -----------GQTNYCAAKAGVIGFSKSLAYEVASRN--ITVNVVAPGFIATDMTDKLTDEQKSFIATKIPSGQIGEPK  216 (247)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTTTTSCHHHHHHHHTTSTTCCCBCHH
T ss_pred             -----------CcHHHHHHHHHHHHHHHHHHHHHHHcC--eEEEEEeeCcEecccchhccHHHHHHHhhcCCCCCCcCHH
Confidence                       678999999999999999999999999  99999999999999987642  122223334555678999


Q ss_pred             HHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          261 QGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       261 eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      |+|++++||++ +.+.++||+.+..||+..
T Consensus       217 dva~~i~~l~s-~~~~~~tG~~i~vdgG~~  245 (247)
T 3lyl_A          217 DIAAAVAFLAS-EEAKYITGQTLHVNGGMY  245 (247)
T ss_dssp             HHHHHHHHHHS-GGGTTCCSCEEEESTTSS
T ss_pred             HHHHHHHHHhC-CCcCCccCCEEEECCCEe
Confidence            99999999998 788999999999887654

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.6e-44  Score=320.36  Aligned_cols=258  Identities=21%  Similarity=0.208  Sum_probs=213.7

Q ss_pred             CCCCCCCCccchhccCCCCCCCEEEEeCCC-CchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEc
Q 021391            9 PSGFSASSTAEEVTQGIDGTGLTAIVTGAS-SGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL   87 (313)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~gk~~lItGas-~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~   87 (313)
                      |..+..+.....+...++++||++|||||+ +|||+++|++|+++|++|++++|+.+.+++..+++.... +.++.++.+
T Consensus         2 ~~~~~~~~~~~~~~~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~   80 (266)
T 3o38_A            2 PGSMNLSEAPKEIDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLG-LGRVEAVVC   80 (266)
T ss_dssp             ----CTTSCCCCCCCCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC-SSCEEEEEC
T ss_pred             CCCcccccCccccccccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC-CCceEEEEe
Confidence            344444555555666778999999999998 599999999999999999999999999998888886543 468999999


Q ss_pred             cCCCHHHHHHHHHHHhhcCCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeE
Q 021391           88 DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRI  165 (313)
Q Consensus        88 D~s~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~i  165 (313)
                      |++|+++++++++++.++++++|+||||||+.....  +.+.++|++.+++|+.++++++++++|+|.+.    +..++|
T Consensus        81 Dl~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~~~~i  156 (266)
T 3o38_A           81 DVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGV----DHGGVI  156 (266)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTS----SCCEEE
T ss_pred             CCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc----CCCeEE
Confidence            999999999999999999999999999999875432  77899999999999999999999999999873    247899


Q ss_pred             EEECCccccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc---
Q 021391          166 VNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG---  242 (313)
Q Consensus       166 v~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~---  242 (313)
                      |++||.++..+.+               +...|++||+|++.|+++++.|++++|  |+||+|+||+++|++.....   
T Consensus       157 v~~sS~~~~~~~~---------------~~~~Y~~sKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~  219 (266)
T 3o38_A          157 VNNASVLGWRAQH---------------SQSHYAAAKAGVMALTRCSAIEAVEFG--VRINAVSPSIARHKFLEKTSSSE  219 (266)
T ss_dssp             EEECCGGGTCCCT---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCCCC----------
T ss_pred             EEeCCHHHcCCCC---------------CCchHHHHHHHHHHHHHHHHHHHHHcC--cEEEEEeCCcccchhhhccCcHH
Confidence            9999999987766               678999999999999999999999999  99999999999999876531   


Q ss_pred             hhHhHHHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          243 ILRGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      ....+....+..+..+|+|+|+.++||++ +.+.++||+++.+||+.
T Consensus       220 ~~~~~~~~~~~~r~~~~~dva~~i~~l~s-~~~~~~tG~~i~vdgG~  265 (266)
T 3o38_A          220 LLDRLASDEAFGRAAEPWEVAATIAFLAS-DYSSYMTGEVVSVSSQR  265 (266)
T ss_dssp             -------CCTTSSCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESSCC
T ss_pred             HHHHHHhcCCcCCCCCHHHHHHHHHHHcC-ccccCccCCEEEEcCCc
Confidence            22233334455677899999999999998 78899999999988764

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=1.4e-44  Score=321.17  Aligned_cols=243  Identities=21%  Similarity=0.275  Sum_probs=209.7

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      +.|+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+++..+.++.+|++++++++++++  
T Consensus         4 m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~--   81 (267)
T 3t4x_A            4 MHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE--   81 (267)
T ss_dssp             CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH--
T ss_pred             cccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH--
Confidence            567899999999999999999999999999999999999999999999999888767788999999999999877765  


Q ss_pred             hhcCCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          103 NSQGRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                        +++++|+||||||+.....  +.+.++|++.+++|+.++++++++++|.|.+     ++.|+||++||.++..+.+  
T Consensus        82 --~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~-----~~~g~iv~isS~~~~~~~~--  152 (267)
T 3t4x_A           82 --KYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIE-----RKEGRVIFIASEAAIMPSQ--  152 (267)
T ss_dssp             --HCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-----TTEEEEEEECCGGGTSCCT--
T ss_pred             --hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-----CCCCEEEEEcchhhccCCC--
Confidence              4689999999999875432  7888999999999999999999999999988     4478999999999988766  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-------------chhHhH
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-------------GILRGF  247 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-------------~~~~~~  247 (313)
                                   +...|++||+|++.|+++++.|++++|  ||||+|+||+++|++....             +....+
T Consensus       153 -------------~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  217 (267)
T 3t4x_A          153 -------------EMAHYSATKTMQLSLSRSLAELTTGTN--VTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRF  217 (267)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHTTTSE--EEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHH
T ss_pred             -------------cchHHHHHHHHHHHHHHHHHHHhCCCC--eEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHH
Confidence                         678999999999999999999999999  9999999999999865421             011111


Q ss_pred             HHHH----HHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCC
Q 021391          248 CNTV----GKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPN  292 (313)
Q Consensus       248 ~~~~----~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~  292 (313)
                      ....    +..+..+|+|+|++++||++ +.+.++||+.+.+||+...+
T Consensus       218 ~~~~~~~~~~~r~~~pedvA~~v~fL~s-~~~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          218 MKENRPTSIIQRLIRPEEIAHLVTFLSS-PLSSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             HHHHCTTCSSCSCBCTHHHHHHHHHHHS-GGGTTCCSCEEEESTTCSCS
T ss_pred             hhccCCcccccCccCHHHHHHHHHHHcC-ccccCccCCeEEECCCcccc
Confidence            1111    23567899999999999998 88999999999988876543

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1e-44  Score=324.35  Aligned_cols=246  Identities=21%  Similarity=0.189  Sum_probs=195.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEec-CchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVR-NMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      +.+++||++|||||++|||+++|++|+++|++|++++| +.+.+++..+++...  +.++.++++|++|+++++++++++
T Consensus        24 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~  101 (280)
T 4da9_A           24 MTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL--GARVIFLRADLADLSSHQATVDAV  101 (280)
T ss_dssp             CSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHT--TCCEEEEECCTTSGGGHHHHHHHH
T ss_pred             hhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHH
Confidence            34589999999999999999999999999999999996 777778777777665  568999999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCC--C-CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccccc
Q 021391          103 NSQGRPLNILINNAGIMA--S-PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYS  178 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~--~-~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~  178 (313)
                      .+++|++|+||||||+..  . +. +.+.++|++.+++|+.++++++++++|.|.++..  +..|+||++||.++..+.+
T Consensus       102 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~--~~~g~Iv~isS~~~~~~~~  179 (280)
T 4da9_A          102 VAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDA--RASRSIINITSVSAVMTSP  179 (280)
T ss_dssp             HHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCC--CCCEEEEEECCC-------
T ss_pred             HHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCC--CCCCEEEEEcchhhccCCC
Confidence            999999999999999842  2 23 7789999999999999999999999999988421  2267999999999988766


Q ss_pred             CCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHH-HHHHhh
Q 021391          179 EGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCN-TVGKLV  255 (313)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~-~~~~~~  255 (313)
                                     +...|++||+|++.|+++++.|++++|  |+||+|+||+++|++.....  ....... ..+..+
T Consensus       180 ---------------~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r  242 (280)
T 4da9_A          180 ---------------ERLDYCMSKAGLAAFSQGLALRLAETG--IAVFEVRPGIIRSDMTAAVSGKYDGLIESGLVPMRR  242 (280)
T ss_dssp             ---------------CCHHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCBCC----------------------C
T ss_pred             ---------------CccHHHHHHHHHHHHHHHHHHHHHHhC--cEEEEEeecCCcCCchhhcchhHHHHHhhcCCCcCC
Confidence                           678999999999999999999999999  99999999999999876531  1122222 456677


Q ss_pred             cCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          256 LKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       256 ~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      ..+|+|+|++++||++ +.+.++||+.+.+||+...
T Consensus       243 ~~~pedvA~~v~~L~s-~~~~~itG~~i~vdGG~~~  277 (280)
T 4da9_A          243 WGEPEDIGNIVAGLAG-GQFGFATGSVIQADGGLSI  277 (280)
T ss_dssp             CBCHHHHHHHHHHHHT-STTGGGTTCEEEESTTCC-
T ss_pred             cCCHHHHHHHHHHHhC-ccccCCCCCEEEECCCccc
Confidence            8899999999999998 8889999999999887654

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=8.6e-45  Score=323.12  Aligned_cols=241  Identities=20%  Similarity=0.231  Sum_probs=207.5

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecC-chhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRN-MAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFAS  100 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~  100 (313)
                      ....+++||++|||||++|||+++|++|+++|++|++++++ .+..++..+++...  +.++.++.+|++|+++++++++
T Consensus        11 ~~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~   88 (270)
T 3is3_A           11 YIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL--GSDAIAIKADIRQVPEIVKLFD   88 (270)
T ss_dssp             CCTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHH
T ss_pred             cCCCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHH
Confidence            34567899999999999999999999999999999998764 55667777777664  5689999999999999999999


Q ss_pred             HHhhcCCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc-ccccc
Q 021391          101 EYNSQGRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA-HRFAY  177 (313)
Q Consensus       101 ~~~~~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~-~~~~~  177 (313)
                      ++.+++|++|+||||||+.....  +.+.++|++.+++|+.++++++++++|+|.+       +|+||++||.. +..+.
T Consensus        89 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~  161 (270)
T 3is3_A           89 QAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE-------GGRIVLTSSNTSKDFSV  161 (270)
T ss_dssp             HHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT-------TCEEEEECCTTTTTCCC
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-------CCeEEEEeCchhccCCC
Confidence            99999999999999999875432  7789999999999999999999999999965       68999999987 44454


Q ss_pred             cCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--------------ch
Q 021391          178 SEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--------------GI  243 (313)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--------------~~  243 (313)
                      +               +...|++||+|++.|+++++.|++++|  ||||+|+||+++|++....              ..
T Consensus       162 ~---------------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  224 (270)
T 3is3_A          162 P---------------KHSLYSGSKGAVDSFVRIFSKDCGDKK--ITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQR  224 (270)
T ss_dssp             T---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHH
T ss_pred             C---------------CCchhHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeCCccChhhhhhhhhccccccccchHHH
Confidence            4               678899999999999999999999999  9999999999999986521              11


Q ss_pred             hHhHHHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          244 LRGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       244 ~~~~~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      ........+..+..+|+|+|++++||++ +.+.++||+.+.+||+.
T Consensus       225 ~~~~~~~~p~~r~~~p~dvA~~v~~L~s-~~~~~itG~~i~vdGG~  269 (270)
T 3is3_A          225 QQMAAHASPLHRNGWPQDVANVVGFLVS-KEGEWVNGKVLTLDGGA  269 (270)
T ss_dssp             HHHHHHHSTTCSCBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTC
T ss_pred             HHHHHhcCCCCCCCCHHHHHHHHHHHcC-CccCCccCcEEEeCCCC
Confidence            2223344566678899999999999998 88999999999988764

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=1.2e-45  Score=327.30  Aligned_cols=245  Identities=16%  Similarity=0.192  Sum_probs=201.2

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecC---chhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRN---MAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKF   98 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~   98 (313)
                      ...++++||++|||||++|||+++|++|+++|++|++++|+   .+.++++.+++...  +.++.++.+|++|+++++++
T Consensus         4 ~~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~   81 (262)
T 3ksu_A            4 TKYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ--GAKVALYQSDLSNEEEVAKL   81 (262)
T ss_dssp             CCCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT--TCEEEEEECCCCSHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHH
Confidence            34578999999999999999999999999999999998775   34566666666554  56899999999999999999


Q ss_pred             HHHHhhcCCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccc
Q 021391           99 ASEYNSQGRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFA  176 (313)
Q Consensus        99 ~~~~~~~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~  176 (313)
                      ++++.+++|++|+||||||+.....  +.+.++|++.+++|+.++++++++++|+|.+       +|+||++||.++..+
T Consensus        82 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-------~g~iv~isS~~~~~~  154 (262)
T 3ksu_A           82 FDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNP-------NGHIITIATSLLAAY  154 (262)
T ss_dssp             HHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE-------EEEEEEECCCHHHHH
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC-------CCEEEEEechhhccC
Confidence            9999999999999999999875532  7789999999999999999999999999844       689999999998887


Q ss_pred             ccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc---chhHhHHHHHHH
Q 021391          177 YSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN---GILRGFCNTVGK  253 (313)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~---~~~~~~~~~~~~  253 (313)
                      .+               ....|++||+|++.|+++++.|++++|  ||||+|+||+++|++....   ..........+.
T Consensus       155 ~~---------------~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  217 (262)
T 3ksu_A          155 TG---------------FYSTYAGNKAPVEHYTRAASKELMKQQ--ISVNAIAPGPMDTSFFYGQETKESTAFHKSQAMG  217 (262)
T ss_dssp             HC---------------CCCC-----CHHHHHHHHHHHHTTTTT--CEEEEEEECCCCTHHHHTCC------------CC
T ss_pred             CC---------------CCchhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEeeCCCcCccccccCchHHHHHHHhcCcc
Confidence            76               678999999999999999999999999  9999999999999986542   112223334455


Q ss_pred             hhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCCcc
Q 021391          254 LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQ  294 (313)
Q Consensus       254 ~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~~  294 (313)
                      .+..+|+|+|++++||++ + +.++||+.+.+||+......
T Consensus       218 ~r~~~pedvA~~v~~L~s-~-~~~itG~~i~vdGg~~~~~~  256 (262)
T 3ksu_A          218 NQLTKIEDIAPIIKFLTT-D-GWWINGQTIFANGGYTTREG  256 (262)
T ss_dssp             CCSCCGGGTHHHHHHHHT-T-TTTCCSCEEEESTTCCCC--
T ss_pred             cCCCCHHHHHHHHHHHcC-C-CCCccCCEEEECCCccCCCc
Confidence            678899999999999998 6 88999999998876655443

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=5.1e-44  Score=319.25  Aligned_cols=245  Identities=20%  Similarity=0.156  Sum_probs=204.9

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecC------------chhHHHHHHHHHHhCCCCceEEEEccCC
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRN------------MAAGKDVREAIVKEIPSAKVDAMELDVS   90 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~D~s   90 (313)
                      ...+++||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++...  +.++.++.+|++
T Consensus         7 ~~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~   84 (278)
T 3sx2_A            7 SEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI--GSRIVARQADVR   84 (278)
T ss_dssp             --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH--TCCEEEEECCTT
T ss_pred             CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhc--CCeEEEEeCCCC
Confidence            3467899999999999999999999999999999999987            56667766666655  568999999999


Q ss_pred             CHHHHHHHHHHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECC
Q 021391           91 SLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSS  170 (313)
Q Consensus        91 ~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS  170 (313)
                      |+++++++++++.+++|++|+||||||+.....  +.++|++.+++|+.++++++++++|+|.++    ..+|+||++||
T Consensus        85 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~--~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~----~~~g~iv~isS  158 (278)
T 3sx2_A           85 DRESLSAALQAGLDELGRLDIVVANAGIAPMSA--GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQ----GTGGSIVLISS  158 (278)
T ss_dssp             CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCSS--THHHHHHHHHHHTHHHHHHHHHHHHHHHHH----CSCEEEEEECC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC--CHHHHHHHHHHHhHHHHHHHHHHHHHHHhC----CCCcEEEEEcc
Confidence            999999999999999999999999999864432  678999999999999999999999999884    23689999999


Q ss_pred             ccccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHH
Q 021391          171 EAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNT  250 (313)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~  250 (313)
                      .++..+...           ..++...|++||+|++.|+++++.|++++|  |+||+|+||+++|++.............
T Consensus       159 ~~~~~~~~~-----------~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~  225 (278)
T 3sx2_A          159 SAGLAGVGS-----------ADPGSVGYVAAKHGVVGLMRVYANLLAGQM--IRVNSIHPSGVETPMINNEFTREWLAKM  225 (278)
T ss_dssp             GGGTSCCCC-----------SSHHHHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCBSSTTTSSHHHHHHHHHH
T ss_pred             HHhcCCCcc-----------CCCCchHhHHHHHHHHHHHHHHHHHHhccC--cEEEEEecCCccCccchhhhHHHHHhhc
Confidence            998876510           112667899999999999999999999999  9999999999999997653211111110


Q ss_pred             -------------HHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          251 -------------VGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       251 -------------~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                                   .+ .+..+|+|+|++++||++ +.+.++||+.+.+||+..
T Consensus       226 ~~~~~~~~~~~~~~p-~~~~~p~dvA~~v~~l~s-~~~~~itG~~i~vdGG~~  276 (278)
T 3sx2_A          226 AAATDTPGAMGNAMP-VEVLAPEDVANAVAWLVS-DQARYITGVTLPVDAGFL  276 (278)
T ss_dssp             HHHCC--CTTSCSSS-CSSBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTTT
T ss_pred             cchhhhhhhhhhhcC-cCcCCHHHHHHHHHHHhC-cccccccCCEEeECCCcc
Confidence                         11 345689999999999998 788999999999887753

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=7.2e-45  Score=321.74  Aligned_cols=246  Identities=21%  Similarity=0.171  Sum_probs=198.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEE-ecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMA-VRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      .++++||++|||||++|||+++|++|+++|++|+++ .|+.+..++..+++...  +.++.++.+|++|+++++++++++
T Consensus         3 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~   80 (259)
T 3edm_A            3 LQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL--GRSALAIKADLTNAAEVEAAISAA   80 (259)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTT--TSCCEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHH
Confidence            467899999999999999999999999999999999 56667777777777654  557899999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCC--CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccc-cccc
Q 021391          103 NSQGRPLNILINNAGIMAS--PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHR-FAYS  178 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~-~~~~  178 (313)
                      .+++|++|+||||||....  +. +.+.++|++.+++|+.++++++++++|.|.+       +|+||++||.++. .+.+
T Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~  153 (259)
T 3edm_A           81 ADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK-------GGAIVTFSSQAGRDGGGP  153 (259)
T ss_dssp             HHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEECCHHHHHCCST
T ss_pred             HHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------CCEEEEEcCHHhccCCCC
Confidence            9999999999999997622  22 7888999999999999999999999999865       6899999999887 5555


Q ss_pred             CCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc---chhHhHHHHHHHhh
Q 021391          179 EGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN---GILRGFCNTVGKLV  255 (313)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~---~~~~~~~~~~~~~~  255 (313)
                                     +...|++||+|++.|+++++.|+++ +  ||||+|+||+++|++....   .....+....+..+
T Consensus       154 ---------------~~~~Y~asKaa~~~l~~~la~e~~~-~--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r  215 (259)
T 3edm_A          154 ---------------GALAYATSKGAVMTFTRGLAKEVGP-K--IRVNAVCPGMISTTFHDTFTKPEVRERVAGATSLKR  215 (259)
T ss_dssp             ---------------TCHHHHHHHHHHHHHHHHHHHHHTT-T--CEEEEEEECCBCC----------------------C
T ss_pred             ---------------CcHHHHHHHHHHHHHHHHHHHHHCC-C--CEEEEEEECCCcCcccccccChHHHHHHHhcCCCCC
Confidence                           6789999999999999999999987 3  9999999999999987653   22333445566778


Q ss_pred             cCChHHHHHHHHHHHccCCccCCCceeecCCcccCCCccCCC
Q 021391          256 LKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQN  297 (313)
Q Consensus       256 ~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~~~~~  297 (313)
                      ..+|+|+|++++||++ +.+.++||+++.+||+.......++
T Consensus       216 ~~~pedva~~v~~L~s-~~~~~itG~~i~vdGg~~~~~~~~~  256 (259)
T 3edm_A          216 EGSSEDVAGLVAFLAS-DDAAYVTGACYDINGGVLFSEGHHH  256 (259)
T ss_dssp             CBCHHHHHHHHHHHHS-GGGTTCCSCEEEESBCSSBC-----
T ss_pred             CcCHHHHHHHHHHHcC-ccccCccCCEEEECCCcCCCCCCCC
Confidence            8899999999999998 8889999999999888776655444

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=6.6e-45  Score=321.48  Aligned_cols=244  Identities=23%  Similarity=0.188  Sum_probs=194.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .|+++||++|||||++|||+++|++|+++|++|++++|+.+..++..+++     +.++.++.+|++|+++++++++++.
T Consensus         2 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~   76 (257)
T 3tpc_A            2 VMQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL-----GAAVRFRNADVTNEADATAALAFAK   76 (257)
T ss_dssp             --CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-----------------CEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999998887776665     4578999999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCCCC------ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccC-CCCCeEEEECCcccccc
Q 021391          104 SQGRPLNILINNAGIMASPF------MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKS-SREGRIVNVSSEAHRFA  176 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~-~~~g~iv~isS~~~~~~  176 (313)
                      +++|++|+||||||+.....      +.+.++|++.+++|+.+++++++++.|.|.+..... ...|+||++||.++..+
T Consensus        77 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~  156 (257)
T 3tpc_A           77 QEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDG  156 (257)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC
T ss_pred             HHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccC
Confidence            99999999999999875422      567799999999999999999999999998731110 24689999999999887


Q ss_pred             ccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHHHHHH-
Q 021391          177 YSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCNTVGK-  253 (313)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~~-  253 (313)
                      .+               +...|++||+|++.|+++++.|++++|  |+||+|+||+++|++.....  ....+....+. 
T Consensus       157 ~~---------------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~  219 (257)
T 3tpc_A          157 QI---------------GQAAYAASKGGVAALTLPAARELARFG--IRVVTIAPGIFDTPMMAGMPQDVQDALAASVPFP  219 (257)
T ss_dssp             CT---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBSCC--------------CCSSSS
T ss_pred             CC---------------CCcchHHHHHHHHHHHHHHHHHHHHcC--eEEEEEEeCCCCChhhccCCHHHHHHHHhcCCCC
Confidence            76               678999999999999999999999999  99999999999999876431  11222223333 


Q ss_pred             hhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCC
Q 021391          254 LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPN  292 (313)
Q Consensus       254 ~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~  292 (313)
                      .+..+|+|+|++++||++ +  .++||+.+.+||+...+
T Consensus       220 ~r~~~~~dva~~v~~l~s-~--~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          220 PRLGRAEEYAALVKHICE-N--TMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             CSCBCHHHHHHHHHHHHH-C--TTCCSCEEEESTTCCC-
T ss_pred             CCCCCHHHHHHHHHHHcc-c--CCcCCcEEEECCCccCC
Confidence            567899999999999997 4  79999999998876654

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=6e-44  Score=318.19  Aligned_cols=244  Identities=24%  Similarity=0.259  Sum_probs=207.2

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      ..|+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|+++++++++++
T Consensus        15 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   92 (273)
T 1ae1_A           15 GRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVCDLLSRTERDKLMQTV   92 (273)
T ss_dssp             -CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHH
Confidence            456789999999999999999999999999999999999998888887777654  457899999999999999999999


Q ss_pred             hhcC-CCeeEEEEcccCCCC-C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccC
Q 021391          103 NSQG-RPLNILINNAGIMAS-P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSE  179 (313)
Q Consensus       103 ~~~~-g~id~lv~~ag~~~~-~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~  179 (313)
                      .+.+ +++|+||||||+... + .+.+.++|++.+++|+.++++++++++|.|.+.     +.++||++||.++..+.+ 
T Consensus        93 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-----~~g~iv~isS~~~~~~~~-  166 (273)
T 1ae1_A           93 AHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS-----QNGNVIFLSSIAGFSALP-  166 (273)
T ss_dssp             HHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TSEEEEEECCGGGTSCCT-
T ss_pred             HHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcCHhhcCCCC-
Confidence            9999 899999999998643 2 267889999999999999999999999999873     368999999999887766 


Q ss_pred             CCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--------chhHhHHHHH
Q 021391          180 GIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--------GILRGFCNTV  251 (313)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--------~~~~~~~~~~  251 (313)
                                    +...|++||++++.++++++.|++++|  |+||+|+||+++|++....        .....+....
T Consensus       167 --------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  230 (273)
T 1ae1_A          167 --------------SVSLYSASKGAINQMTKSLACEWAKDN--IRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKT  230 (273)
T ss_dssp             --------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBC-------------CHHHHHHHHHHS
T ss_pred             --------------CcchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcC
Confidence                          678999999999999999999999999  9999999999999986532        1112233334


Q ss_pred             HHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          252 GKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       252 ~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      +..+..+|+|+|++++||++ +.+.++||+.+.+||+...
T Consensus       231 p~~r~~~p~dvA~~v~~l~s-~~~~~~tG~~i~vdGG~~~  269 (273)
T 1ae1_A          231 PMGRAGKPQEVSALIAFLCF-PAASYITGQIIWADGGFTA  269 (273)
T ss_dssp             TTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCcCHHHHHHHHHHHhC-ccccCcCCCEEEECCCccc
Confidence            55567899999999999998 7889999999998877544

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=2.8e-44  Score=324.00  Aligned_cols=247  Identities=15%  Similarity=0.121  Sum_probs=212.0

Q ss_pred             hccCCCCCCCEEEEeCCCC--chHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHH
Q 021391           21 VTQGIDGTGLTAIVTGASS--GIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKF   98 (313)
Q Consensus        21 ~~~~~~~~gk~~lItGas~--giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~   98 (313)
                      +...++++||++|||||++  |||+++|++|+++|++|++++|+.+..+... ++....  ..+.++++|++|+++++++
T Consensus        22 m~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~-~~~~~~--~~~~~~~~Dv~d~~~v~~~   98 (296)
T 3k31_A           22 MRTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVD-PLAESL--GVKLTVPCDVSDAESVDNM   98 (296)
T ss_dssp             CCCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHHHHH--TCCEEEECCTTCHHHHHHH
T ss_pred             ccchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHH-HHHHhc--CCeEEEEcCCCCHHHHHHH
Confidence            4456789999999999997  9999999999999999999999976544443 333332  2468999999999999999


Q ss_pred             HHHHhhcCCCeeEEEEcccCCCC-----CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391           99 ASEYNSQGRPLNILINNAGIMAS-----PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus        99 ~~~~~~~~g~id~lv~~ag~~~~-----~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                      ++++.+++|++|+||||||+...     +. +.+.++|++.+++|+.++++++++++|.|.+       +|+||++||.+
T Consensus        99 ~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-------~g~IV~isS~~  171 (296)
T 3k31_A           99 FKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN-------GGSILTLSYYG  171 (296)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT-------CEEEEEEECGG
T ss_pred             HHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-------CCEEEEEEehh
Confidence            99999999999999999998742     33 7889999999999999999999999999865       68999999999


Q ss_pred             ccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccch----hHhHH
Q 021391          173 HRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI----LRGFC  248 (313)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~----~~~~~  248 (313)
                      +..+.+               .+..|++||+|++.|+++++.|++++|  ||||+|+||+++|++......    .....
T Consensus       172 ~~~~~~---------------~~~~Y~asKaal~~l~~~la~e~~~~g--Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~  234 (296)
T 3k31_A          172 AEKVVP---------------HYNVMGVCKAALEASVKYLAVDLGKQQ--IRVNAISAGPVRTLASSGISDFHYILTWNK  234 (296)
T ss_dssp             GTSCCT---------------TTTHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECCCCCSSCCSCHHHHHHHHHHH
T ss_pred             hccCCC---------------CchhhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEECCCcCchhhcccchHHHHHHHH
Confidence            987766               678999999999999999999999999  999999999999998775422    22334


Q ss_pred             HHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCCccC
Q 021391          249 NTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQG  295 (313)
Q Consensus       249 ~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~~~  295 (313)
                      ...+..+..+|+|+|++++||++ +.+.++||+.|.+||+.......
T Consensus       235 ~~~p~~r~~~pedvA~~v~fL~s-~~a~~itG~~i~vdGG~~~~~~~  280 (296)
T 3k31_A          235 YNSPLRRNTTLDDVGGAALYLLS-DLGRGTTGETVHVDCGYHVVGMK  280 (296)
T ss_dssp             HHSTTSSCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGGCSSC
T ss_pred             hcCCCCCCCCHHHHHHHHHHHcC-CccCCccCCEEEECCCccccCCc
Confidence            45566778899999999999998 88899999999988887666543

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=7.4e-44  Score=314.05  Aligned_cols=235  Identities=18%  Similarity=0.147  Sum_probs=189.7

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++...  +.++.++.+|++|+++++++++++.
T Consensus         2 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~   79 (252)
T 3h7a_A            2 SLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA--GGRIVARSLDARNEDEVTAFLNAAD   79 (252)
T ss_dssp             ---CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECcCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999999999999888776  5689999999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          104 SQGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      +. |++|+||||||+.... . +.+.++|++.+++|+.++++++++++|.|.++     +.|+||++||.++..+.+   
T Consensus        80 ~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~---  150 (252)
T 3h7a_A           80 AH-APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAH-----GQGKIFFTGATASLRGGS---  150 (252)
T ss_dssp             HH-SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEEEEGGGTCCCT---
T ss_pred             hh-CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEECCHHHcCCCC---
Confidence            99 9999999999987643 2 78899999999999999999999999999983     378999999999988776   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEE-EEeeCcccccCCccccc--hhHhHHHHHHHhhcCC
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITA-NSLHPGSIVTNLFRYNG--ILRGFCNTVGKLVLKN  258 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~v-n~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~  258 (313)
                                  +...|++||+|++.|+++++.|++++|  ||| |+|+||+++|++.....  .........+.. ..+
T Consensus       151 ------------~~~~Y~asKaa~~~l~~~la~e~~~~g--i~v~n~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~~  215 (252)
T 3h7a_A          151 ------------GFAAFASAKFGLRAVAQSMARELMPKN--IHVAHLIIDSGVDTAWVRERREQMFGKDALANPDL-LMP  215 (252)
T ss_dssp             ------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEC----------------------------CC
T ss_pred             ------------CCccHHHHHHHHHHHHHHHHHHhhhcC--CEEEEEecCCccCChhhhccchhhhhhhhhcCCcc-CCC
Confidence                        678999999999999999999999999  999 99999999999977541  112223333444 789


Q ss_pred             hHHHHHHHHHHHccCCccCCCceeecC
Q 021391          259 IPQGAATTCYVALHPQVQGVSGEYFSD  285 (313)
Q Consensus       259 ~~eva~~~~~l~~~~~~~~~tG~~~~~  285 (313)
                      |+|+|+.++||++ +....++|++...
T Consensus       216 pedvA~~~~~l~s-~~~~~~~~~i~~~  241 (252)
T 3h7a_A          216 PAAVAGAYWQLYQ-QPKSAWTFEMEIR  241 (252)
T ss_dssp             HHHHHHHHHHHHH-CCGGGBCSEEEEB
T ss_pred             HHHHHHHHHHHHh-CchhcceeeEEee
Confidence            9999999999998 4556677776543

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=3e-44  Score=318.18  Aligned_cols=239  Identities=22%  Similarity=0.217  Sum_probs=207.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|+++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (262)
T 1zem_A            3 KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVCDVTSEEAVIGTVDSVVR   80 (262)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999998888887777654  45789999999999999999999999


Q ss_pred             cCCCeeEEEEcccCC-CC-CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          105 QGRPLNILINNAGIM-AS-PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       105 ~~g~id~lv~~ag~~-~~-~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      .+|++|+||||||+. .. +. +.+.++|++.+++|+.+++++++++.|.|.++     ..++||++||.++..+.+   
T Consensus        81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~---  152 (262)
T 1zem_A           81 DFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQ-----NYGRIVNTASMAGVKGPP---  152 (262)
T ss_dssp             HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHSCCT---
T ss_pred             HhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcchhhccCCC---
Confidence            999999999999976 32 33 67889999999999999999999999999873     368999999999887766   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-------------c-----h
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-------------G-----I  243 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-------------~-----~  243 (313)
                                  ....|++||++++.++++++.|++++|  ||||+|+||+++|++....             .     .
T Consensus       153 ------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (262)
T 1zem_A          153 ------------NMAAYGTSKGAIIALTETAALDLAPYN--IRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVV  218 (262)
T ss_dssp             ------------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHH
T ss_pred             ------------CCchHHHHHHHHHHHHHHHHHHHHhhC--eEEEEEecCCcCcchhhhhccchhhhccccccccCHHHH
Confidence                        678999999999999999999999999  9999999999999985431             1     1


Q ss_pred             hHhHHHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcc
Q 021391          244 LRGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNI  288 (313)
Q Consensus       244 ~~~~~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~  288 (313)
                      ...+....+..+..+|+|+|+.++||++ +.+.++||+.+.+||+
T Consensus       219 ~~~~~~~~p~~r~~~p~dvA~~v~~l~s-~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          219 AQQMIGSVPMRRYGDINEIPGVVAFLLG-DDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             HHHHHHTSTTSSCBCGGGSHHHHHHHHS-GGGTTCCSCEEEESCC
T ss_pred             HHHHHhcCCCCCCcCHHHHHHHHHHHcC-chhcCcCCcEEecCCC
Confidence            1112223355667899999999999998 7889999999998764

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=4.9e-44  Score=320.10  Aligned_cols=241  Identities=17%  Similarity=0.173  Sum_probs=205.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      |+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|++++++++++++++.+
T Consensus         1 M~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~   75 (281)
T 3zv4_A            1 MKLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH-----GGNAVGVVGDVRSLQDQKRAAERCLA   75 (281)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----BTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc-----CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999988777655443     45799999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCC--CC-----ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccc
Q 021391          105 QGRPLNILINNAGIMAS--PF-----MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAY  177 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~--~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~  177 (313)
                      ++|++|+||||||+...  +.     +.+.++|++.+++|+.++++++++++|+|.+.      +|+||++||..+..+.
T Consensus        76 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~  149 (281)
T 3zv4_A           76 AFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS------RGSVVFTISNAGFYPN  149 (281)
T ss_dssp             HHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCGGGTSSS
T ss_pred             hcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc------CCeEEEEecchhccCC
Confidence            99999999999998643  11     23345799999999999999999999999873      5899999999998876


Q ss_pred             cCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc------------chhH
Q 021391          178 SEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN------------GILR  245 (313)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~------------~~~~  245 (313)
                      +               +...|++||+|++.|+++++.|+++ +  ||||+|+||+++|++....            +...
T Consensus       150 ~---------------~~~~Y~asKaa~~~l~~~la~e~~~-~--Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  211 (281)
T 3zv4_A          150 G---------------GGPLYTATKHAVVGLVRQMAFELAP-H--VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLAD  211 (281)
T ss_dssp             S---------------SCHHHHHHHHHHHHHHHHHHHHHTT-T--SEEEEEEECSSCC--CCCTTCC--------CCHHH
T ss_pred             C---------------CCchhHHHHHHHHHHHHHHHHHhcC-C--CEEEEEECCcCcCCcccccccccccccccchhHHH
Confidence            6               6788999999999999999999987 3  9999999999999986531            1223


Q ss_pred             hHHHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCCcc
Q 021391          246 GFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQ  294 (313)
Q Consensus       246 ~~~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~~  294 (313)
                      .+....+..+..+|+|+|++++||++++.+.++||+.+.+||+......
T Consensus       212 ~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~~~~~~  260 (281)
T 3zv4_A          212 MLKSVLPIGRMPALEEYTGAYVFFATRGDSLPATGALLNYDGGMGVRGF  260 (281)
T ss_dssp             HHHHTCTTSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSGGGCCS
T ss_pred             HHHhcCCCCCCCCHHHHHHHHHHhhcccccccccCcEEEECCCCccccc
Confidence            3444556778899999999999999867888999999998887765544

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=2e-44  Score=321.49  Aligned_cols=236  Identities=20%  Similarity=0.242  Sum_probs=201.2

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchh-------HHHHHHHHHHhCCCCceEEEEccCCCHHHHH
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAA-------GKDVREAIVKEIPSAKVDAMELDVSSLASVR   96 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~   96 (313)
                      +|+++||++|||||++|||+++|++|+++|++|++++|+.+.       +++..+++...  +.++.++.+|++|+++++
T Consensus         1 ~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~   78 (274)
T 3e03_A            1 SLTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA--GGQGLALKCDIREEDQVR   78 (274)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHH--TSEEEEEECCTTCHHHHH
T ss_pred             CCCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHH
Confidence            378999999999999999999999999999999999998754       56666666655  568999999999999999


Q ss_pred             HHHHHHhhcCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccc
Q 021391           97 KFASEYNSQGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHR  174 (313)
Q Consensus        97 ~~~~~~~~~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~  174 (313)
                      ++++++.+++|++|+||||||+.... . +.+.++|++++++|+.++++++++++|+|.+     ++.|+||++||..+.
T Consensus        79 ~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-----~~~g~iv~isS~~~~  153 (274)
T 3e03_A           79 AAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQ-----APNPHILTLAPPPSL  153 (274)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTT-----SSSCEEEECCCCCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHh-----cCCceEEEECChHhc
Confidence            99999999999999999999987543 2 7888999999999999999999999999987     457999999999887


Q ss_pred             cc--ccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCc-ccccCCccccchhHhHHHHH
Q 021391          175 FA--YSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPG-SIVTNLFRYNGILRGFCNTV  251 (313)
Q Consensus       175 ~~--~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG-~v~t~~~~~~~~~~~~~~~~  251 (313)
                      .+  .+               +...|++||+|++.|+++++.|++++|  ||||+|+|| +++|++.....       ..
T Consensus       154 ~~~~~~---------------~~~~Y~asKaal~~l~~~la~e~~~~g--I~vn~v~PG~~v~T~~~~~~~-------~~  209 (274)
T 3e03_A          154 NPAWWG---------------AHTGYTLAKMGMSLVTLGLAAEFGPQG--VAINALWPRTVIATDAINMLP-------GV  209 (274)
T ss_dssp             CHHHHH---------------HCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEECSBCBCC--------------CC
T ss_pred             CCCCCC---------------CCchHHHHHHHHHHHHHHHHHHhhhcC--EEEEEEECCcccccchhhhcc-------cc
Confidence            76  44               567899999999999999999999999  999999999 68999864321       11


Q ss_pred             HHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          252 GKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       252 ~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      +..+..+|+|+|+.++||++ +.+.++||+++.++|....
T Consensus       210 ~~~~~~~pedvA~~v~~l~s-~~~~~itG~~i~~~g~~~~  248 (274)
T 3e03_A          210 DAAACRRPEIMADAAHAVLT-REAAGFHGQFLIDDEVLAQ  248 (274)
T ss_dssp             CGGGSBCTHHHHHHHHHHHT-SCCTTCCSCEEEHHHHHHH
T ss_pred             cccccCCHHHHHHHHHHHhC-ccccccCCeEEEcCcchhh
Confidence            23346789999999999998 8889999999976665443

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=3.5e-44  Score=318.52  Aligned_cols=244  Identities=21%  Similarity=0.237  Sum_probs=209.8

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++....++.++.++.+|++|+++++++++++.
T Consensus         8 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   87 (267)
T 1iy8_A            8 TTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATT   87 (267)
T ss_dssp             --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            34689999999999999999999999999999999999998888888888766545678999999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCC--CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          104 SQGRPLNILINNAGIMAS--PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      +++|++|+||||||+...  +. +.+.++|++.+++|+.++++++++++|.|.++     +.++||++||.++..+.+  
T Consensus        88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~--  160 (267)
T 1iy8_A           88 ERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ-----GSGMVVNTASVGGIRGIG--  160 (267)
T ss_dssp             HHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGTSBCS--
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCCEEEEEcchhhccCCC--
Confidence            999999999999998643  22 67889999999999999999999999999873     368999999999887766  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc------chhH----hHHHH
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN------GILR----GFCNT  250 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~------~~~~----~~~~~  250 (313)
                                   +...|++||++++.++++++.|++++|  |+||+|+||+++|++....      ....    .+...
T Consensus       161 -------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  225 (267)
T 1iy8_A          161 -------------NQSGYAAAKHGVVGLTRNSAVEYGRYG--IRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQV  225 (267)
T ss_dssp             -------------SBHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTT
T ss_pred             -------------CCccHHHHHHHHHHHHHHHHHHHHhcC--eEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhcc
Confidence                         678999999999999999999999999  9999999999999985431      1111    12222


Q ss_pred             HHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          251 VGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       251 ~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      .+..+..+|+|+|+.++||++ +.+.++||+.+.+||+..
T Consensus       226 ~p~~r~~~~~dvA~~v~~l~s-~~~~~~tG~~i~vdGG~~  264 (267)
T 1iy8_A          226 NPSKRYGEAPEIAAVVAFLLS-DDASYVNATVVPIDGGQS  264 (267)
T ss_dssp             CTTCSCBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTTT
T ss_pred             CCCCCCcCHHHHHHHHHHHcC-ccccCCCCCEEEECCCcc
Confidence            344567799999999999997 778899999999887653

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=1.6e-44  Score=318.01  Aligned_cols=242  Identities=21%  Similarity=0.281  Sum_probs=203.7

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCC-CceEEEEccCCCHHHHHHHHHHH
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPS-AKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++....++ .++.++.+|++|+++++++++++
T Consensus         2 ~~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   81 (250)
T 3nyw_A            2 SLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDI   81 (250)
T ss_dssp             ---CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999999999999888876544 67899999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCC-CCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          103 NSQGRPLNILINNAGIMAS-PFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      .+++|++|+||||||+... +.+.+.++|++.+++|+.++++++++++|.|.+.     +.|+||++||.++..+.+   
T Consensus        82 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~---  153 (250)
T 3nyw_A           82 HQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQ-----KNGYIFNVASRAAKYGFA---  153 (250)
T ss_dssp             HHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECC-------C---
T ss_pred             HHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCeEEEEEccHHhcCCCC---
Confidence            9999999999999998654 3367789999999999999999999999999883     478999999999887655   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHH
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQ  261 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~e  261 (313)
                                  +...|++||+|++.|+++++.|++++|  ||||+|+||+++|++.....      ...+..+..+|+|
T Consensus       154 ------------~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~------~~~~~~~~~~p~d  213 (250)
T 3nyw_A          154 ------------DGGIYGSTKFALLGLAESLYRELAPLG--IRVTTLCPGWVNTDMAKKAG------TPFKDEEMIQPDD  213 (250)
T ss_dssp             ------------CTTHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBCSHHHHHTT------CCSCGGGSBCHHH
T ss_pred             ------------CCcchHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCcccCchhhhcC------CCcccccCCCHHH
Confidence                        567899999999999999999999999  99999999999998765321      1123456789999


Q ss_pred             HHHHHHHHHccCCccCCCceeecCCcccCCCc
Q 021391          262 GAATTCYVALHPQVQGVSGEYFSDSNIYKPNS  293 (313)
Q Consensus       262 va~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~  293 (313)
                      +|+.++||++++....++|..+.+||......
T Consensus       214 va~~v~~l~s~~~~~~~~~~~i~vd~~~~~~~  245 (250)
T 3nyw_A          214 LLNTIRCLLNLSENVCIKDIVFEMKKSIIEGH  245 (250)
T ss_dssp             HHHHHHHHHTSCTTEECCEEEEEEHHHHHC--
T ss_pred             HHHHHHHHHcCCCceEeeEEEEEeeccccccc
Confidence            99999999997777788888998886654433

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=8.8e-44  Score=320.31  Aligned_cols=243  Identities=18%  Similarity=0.141  Sum_probs=204.9

Q ss_pred             CCCCCCEEEEeCCC--CchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           25 IDGTGLTAIVTGAS--SGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        25 ~~~~gk~~lItGas--~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      .+++||++|||||+  +|||+++|++|+++|++|++++|+.+. .+..+++....  .++.++.+|++|+++++++++++
T Consensus        27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~  103 (293)
T 3grk_A           27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDAL-KKRVEPLAEEL--GAFVAGHCDVADAASIDAVFETL  103 (293)
T ss_dssp             CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHH-HHHHHHHHHHH--TCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHH-HHHHHHHHHhc--CCceEEECCCCCHHHHHHHHHHH
Confidence            45899999999999  559999999999999999999999543 33444454443  36889999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCC-----CCC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccc
Q 021391          103 NSQGRPLNILINNAGIMA-----SPF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFA  176 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~-----~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~  176 (313)
                      .+++|++|+||||||+..     .+. +.+.++|++.+++|+.++++++++++|+|.+       +|+||++||.++..+
T Consensus       104 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-------~g~Iv~isS~~~~~~  176 (293)
T 3grk_A          104 EKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD-------GGSILTLTYYGAEKV  176 (293)
T ss_dssp             HHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT-------CEEEEEEECGGGTSB
T ss_pred             HHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC-------CCEEEEEeehhhccC
Confidence            999999999999999874     233 7889999999999999999999999999965       689999999999887


Q ss_pred             ccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----hhHhHHHHHH
Q 021391          177 YSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----ILRGFCNTVG  252 (313)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----~~~~~~~~~~  252 (313)
                      .+               .+..|++||+|++.|+++++.|++++|  ||||+|+||+++|++.....    ....+....+
T Consensus       177 ~~---------------~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p  239 (293)
T 3grk_A          177 MP---------------NYNVMGVAKAALEASVKYLAVDLGPQN--IRVNAISAGPIKTLAASGIGDFRYILKWNEYNAP  239 (293)
T ss_dssp             CT---------------TTTHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCCCC------CCHHHHHHHHHHHST
T ss_pred             CC---------------chHHHHHHHHHHHHHHHHHHHHHhHhC--CEEEEEecCCCcchhhhcccchHHHHHHHHhcCC
Confidence            66               678999999999999999999999999  99999999999999876542    2233444556


Q ss_pred             HhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCCccC
Q 021391          253 KLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQG  295 (313)
Q Consensus       253 ~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~~~  295 (313)
                      ..+..+|+|+|++++||++ +.+.++||++|.+||+.......
T Consensus       240 ~~r~~~pedvA~~v~~L~s-~~~~~itG~~i~vdGG~~~~~~~  281 (293)
T 3grk_A          240 LRRTVTIDEVGDVGLYFLS-DLSRSVTGEVHHADSGYHVIGMK  281 (293)
T ss_dssp             TSSCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGGBCC-
T ss_pred             CCCCCCHHHHHHHHHHHcC-ccccCCcceEEEECCCcccCCCC
Confidence            6778899999999999998 88899999999988887766543

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=9.1e-44  Score=314.69  Aligned_cols=243  Identities=26%  Similarity=0.254  Sum_probs=209.7

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      ..|+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|+++++++++++
T Consensus         3 ~~~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   80 (260)
T 2ae2_A            3 GRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVCDLSSRSERQELMNTV   80 (260)
T ss_dssp             CTTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHH
Confidence            456789999999999999999999999999999999999998888887777654  457899999999999999999999


Q ss_pred             hhcC-CCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccC
Q 021391          103 NSQG-RPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSE  179 (313)
Q Consensus       103 ~~~~-g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~  179 (313)
                      .+++ +++|+||||||+.... . +.+.++|++.+++|+.++++++++++|.|.+     ++.++||++||.++..+.+ 
T Consensus        81 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-----~~~g~iv~isS~~~~~~~~-  154 (260)
T 2ae2_A           81 ANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKA-----SERGNVVFISSVSGALAVP-  154 (260)
T ss_dssp             HHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-----TSSEEEEEECCGGGTSCCT-
T ss_pred             HHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-----cCCcEEEEEcchhhccCCC-
Confidence            9999 8999999999986542 2 6788999999999999999999999999987     4468999999999887655 


Q ss_pred             CCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----hhH---hHHHHHH
Q 021391          180 GIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----ILR---GFCNTVG  252 (313)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----~~~---~~~~~~~  252 (313)
                                    +...|++||++++.++++++.|++++|  |+||+|+||+++|++.....    ...   .+....+
T Consensus       155 --------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  218 (260)
T 2ae2_A          155 --------------YEAVYGATKGAMDQLTRCLAFEWAKDN--IRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCA  218 (260)
T ss_dssp             --------------TCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTST
T ss_pred             --------------CcchHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCC
Confidence                          678899999999999999999999999  99999999999999754321    111   2222234


Q ss_pred             HhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          253 KLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       253 ~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      ..+..+|+|+|+.++||++ +.+.++||+.+.++|+..
T Consensus       219 ~~~~~~~~dvA~~v~~l~s-~~~~~~tG~~~~vdgG~~  255 (260)
T 2ae2_A          219 LRRMGEPKELAAMVAFLCF-PAASYVTGQIIYVDGGLM  255 (260)
T ss_dssp             TCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             CCCCCCHHHHHHHHHHHcC-ccccCCCCCEEEECCCcc
Confidence            4567799999999999998 778899999999887654

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=7.5e-44  Score=313.94  Aligned_cols=237  Identities=25%  Similarity=0.260  Sum_probs=205.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccC--CCHHHHHHHHHHH
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDV--SSLASVRKFASEY  102 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~--s~~~~v~~~~~~~  102 (313)
                      ..++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.... +.++.++.+|+  +|.++++++++++
T Consensus         8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (252)
T 3f1l_A            8 DLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET-GRQPQWFILDLLTCTSENCQQLAQRI   86 (252)
T ss_dssp             TTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCCceEEEEecccCCHHHHHHHHHHH
Confidence            45899999999999999999999999999999999999999998888887653 34788999999  9999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCC--CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccC
Q 021391          103 NSQGRPLNILINNAGIMAS--PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSE  179 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~  179 (313)
                      .+++|++|+||||||+...  +. +.+.++|++++++|+.++++++++++|+|.+     ++.|+||++||.++..+.+ 
T Consensus        87 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~-----~~~g~iv~isS~~~~~~~~-  160 (252)
T 3f1l_A           87 AVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLK-----SDAGSLVFTSSSVGRQGRA-  160 (252)
T ss_dssp             HHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHT-----SSSCEEEEECCGGGTSCCT-
T ss_pred             HHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHH-----CCCCEEEEECChhhccCCC-
Confidence            9999999999999998532  33 7889999999999999999999999999988     4579999999999988766 


Q ss_pred             CCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCCh
Q 021391          180 GIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNI  259 (313)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  259 (313)
                                    +...|++||+|++.|+++++.|+++.   ||||+|+||+++|++.....      ......+..+|
T Consensus       161 --------------~~~~Y~asK~a~~~l~~~la~e~~~~---irvn~v~PG~v~t~~~~~~~------~~~~~~~~~~p  217 (252)
T 3f1l_A          161 --------------NWGAYAASKFATEGMMQVLADEYQQR---LRVNCINPGGTRTAMRASAF------PTEDPQKLKTP  217 (252)
T ss_dssp             --------------TCHHHHHHHHHHHHHHHHHHHHTTTT---CEEEEEECCSBSSHHHHHHC------TTCCGGGSBCT
T ss_pred             --------------CCchhHHHHHHHHHHHHHHHHHhcCC---cEEEEEecCcccCchhhhhC------CccchhccCCH
Confidence                          67899999999999999999999864   99999999999998754210      01122346789


Q ss_pred             HHHHHHHHHHHccCCccCCCceeecCCcccCCC
Q 021391          260 PQGAATTCYVALHPQVQGVSGEYFSDSNIYKPN  292 (313)
Q Consensus       260 ~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~  292 (313)
                      +|+|+.++||++ +.+.++||+.+.+||+..+.
T Consensus       218 ~dva~~~~~L~s-~~~~~itG~~i~vdgG~~~~  249 (252)
T 3f1l_A          218 ADIMPLYLWLMG-DDSRRKTGMTFDAQPGRKPG  249 (252)
T ss_dssp             GGGHHHHHHHHS-GGGTTCCSCEEESSCC----
T ss_pred             HHHHHHHHHHcC-ccccCCCCCEEEeCCCcCCC
Confidence            999999999998 88899999999998876554

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=1.3e-44  Score=325.93  Aligned_cols=243  Identities=22%  Similarity=0.201  Sum_probs=208.2

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc--hhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM--AAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFA   99 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~   99 (313)
                      ...++++||++|||||++|||+++|++|+++|++|++++|+.  +..++..+.+...  +.++.++.+|++|++++++++
T Consensus        42 ~~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~  119 (294)
T 3r3s_A           42 VGSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEEC--GRKAVLLPGDLSDESFARSLV  119 (294)
T ss_dssp             CCCSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHT--TCCEEECCCCTTSHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHc--CCcEEEEEecCCCHHHHHHHH
Confidence            345678999999999999999999999999999999999873  3445555544443  567999999999999999999


Q ss_pred             HHHhhcCCCeeEEEEcccCCCC--CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccc
Q 021391          100 SEYNSQGRPLNILINNAGIMAS--PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFA  176 (313)
Q Consensus       100 ~~~~~~~g~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~  176 (313)
                      +++.+++|++|+||||||+...  +. +.+.++|++.+++|+.++++++++++|.|.+       +|+||++||.++..+
T Consensus       120 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-------~g~Iv~isS~~~~~~  192 (294)
T 3r3s_A          120 HKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK-------GASIITTSSIQAYQP  192 (294)
T ss_dssp             HHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT-------TCEEEEECCGGGTSC
T ss_pred             HHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc-------CCEEEEECChhhccC
Confidence            9999999999999999998642  22 7889999999999999999999999999855       689999999999887


Q ss_pred             ccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----chhHhHHHHHH
Q 021391          177 YSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----GILRGFCNTVG  252 (313)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~  252 (313)
                      .+               +...|++||+|++.|+++++.|++++|  |+||+|+||+++|++....    .....+....+
T Consensus       193 ~~---------------~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p  255 (294)
T 3r3s_A          193 SP---------------HLLDYAATKAAILNYSRGLAKQVAEKG--IRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTP  255 (294)
T ss_dssp             CT---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTST
T ss_pred             CC---------------CchHHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCcCccccccccCCCHHHHHHHHhcCC
Confidence            66               678999999999999999999999999  9999999999999873221    22233344556


Q ss_pred             HhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          253 KLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       253 ~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      ..+..+|+|+|++++||++ +.+.++||+.+.+||+...
T Consensus       256 ~~r~~~p~dvA~~v~~L~s-~~~~~itG~~i~vdGG~~l  293 (294)
T 3r3s_A          256 MKRAGQPAELAPVYVYLAS-QESSYVTAEVHGVCGGEHL  293 (294)
T ss_dssp             TSSCBCGGGGHHHHHHHHS-GGGTTCCSCEEEESTTCCC
T ss_pred             CCCCcCHHHHHHHHHHHhC-ccccCCCCCEEEECCCccC
Confidence            6778899999999999998 8899999999999887653

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=6.1e-44  Score=315.68  Aligned_cols=246  Identities=24%  Similarity=0.261  Sum_probs=201.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .|+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|++|.++++++++++.
T Consensus         4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~   78 (261)
T 3n74_A            4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI-----GDAALAVAADISKEADVDAAVEAAL   78 (261)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHH
Confidence            47889999999999999999999999999999999999998888777665     5578999999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCC--CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          104 SQGRPLNILINNAGIMAS--PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      ++++++|+||||||+...  +. +.+.++|++.+++|+.++++++++++|.|.++... ...++||++||..+..+.+  
T Consensus        79 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~-~~~~~iv~isS~~~~~~~~--  155 (261)
T 3n74_A           79 SKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAK-GQECVILNVASTGAGRPRP--  155 (261)
T ss_dssp             HHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHT-TCCEEEEEECCTTTTSCCT--
T ss_pred             HhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-CCCeEEEEeCchhhcCCCC--
Confidence            999999999999998653  22 56889999999999999999999999999885311 2367899999999887766  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc------chhHhHHHHHHHh
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN------GILRGFCNTVGKL  254 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~------~~~~~~~~~~~~~  254 (313)
                                   ....|++||+|++.|+++++.|++++|  |+||+|+||+++|++....      .....+....+..
T Consensus       156 -------------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  220 (261)
T 3n74_A          156 -------------NLAWYNATKGWVVSVTKALAIELAPAK--IRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMG  220 (261)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEC-------------------------CTTS
T ss_pred             -------------CccHHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcC
Confidence                         678899999999999999999999999  9999999999999987643      1223334455666


Q ss_pred             hcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCCc
Q 021391          255 VLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNS  293 (313)
Q Consensus       255 ~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~  293 (313)
                      +..+|+|+|++++||++ +.+.++||+.|.+||+...+.
T Consensus       221 ~~~~~~dva~~~~~l~s-~~~~~itG~~i~vdgG~~~~~  258 (261)
T 3n74_A          221 RLLKPDDLAEAAAFLCS-PQASMITGVALDVDGGRSIGG  258 (261)
T ss_dssp             SCCCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTTTC--
T ss_pred             CCcCHHHHHHHHHHHcC-CcccCcCCcEEEecCCcccCC
Confidence            78899999999999998 888999999999988876643

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=7.5e-45  Score=326.33  Aligned_cols=243  Identities=24%  Similarity=0.275  Sum_probs=210.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCC---EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHH
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGV---HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFAS  100 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~---~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~  100 (313)
                      ..+++||++|||||++|||+++|++|+++|+   +|++++|+.+.++++.+++...+++.++.++.+|++|+++++++++
T Consensus        28 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~  107 (287)
T 3rku_A           28 AERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIE  107 (287)
T ss_dssp             HHHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHH
T ss_pred             hhhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHH
Confidence            3558999999999999999999999999998   9999999999999999999887767789999999999999999999


Q ss_pred             HHhhcCCCeeEEEEcccCCCC--CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccc
Q 021391          101 EYNSQGRPLNILINNAGIMAS--PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAY  177 (313)
Q Consensus       101 ~~~~~~g~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~  177 (313)
                      ++.+++|++|+||||||+...  +. +.+.++|++.+++|+.++++++++++|.|.+.     +.|+||++||.++..+.
T Consensus       108 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~IV~isS~~~~~~~  182 (287)
T 3rku_A          108 NLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAK-----NSGDIVNLGSIAGRDAY  182 (287)
T ss_dssp             TSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGTSCC
T ss_pred             HHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCeEEEECChhhcCCC
Confidence            999999999999999997642  23 77889999999999999999999999999883     47899999999998876


Q ss_pred             cCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--chhHhHHHHHHHhh
Q 021391          178 SEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--GILRGFCNTVGKLV  255 (313)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--~~~~~~~~~~~~~~  255 (313)
                      +               +...|++||+|++.|+++++.|++++|  |+||+|+||+++|++....  ..............
T Consensus       183 ~---------------~~~~Y~asKaa~~~l~~~la~e~~~~g--Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  245 (287)
T 3rku_A          183 P---------------TGSIYCASKFAVGAFTDSLRKELINTK--IRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTT  245 (287)
T ss_dssp             T---------------TCHHHHHHHHHHHHHHHHHHHHTTTSS--CEEEEEEESCEESSHHHHHTTTCHHHHHHHHTTSC
T ss_pred             C---------------CCchHHHHHHHHHHHHHHHHHHhhhcC--CEEEEEeCCcCcCccccccccCcHHHHHHhhcccC
Confidence            6               678999999999999999999999999  9999999999999975321  11111222222233


Q ss_pred             cCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          256 LKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       256 ~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      ..+|+|+|++++||++ +...+++|+.+..+++.
T Consensus       246 p~~pedvA~~v~~l~s-~~~~~i~g~~i~v~~g~  278 (287)
T 3rku_A          246 PLMADDVADLIVYATS-RKQNTVIADTLIFPTNQ  278 (287)
T ss_dssp             CEEHHHHHHHHHHHHT-SCTTEEEEEEEEEETTE
T ss_pred             CCCHHHHHHHHHHHhC-CCCCeEecceEEeeCCC
Confidence            4579999999999998 78889999988865443

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=1.1e-43  Score=311.58  Aligned_cols=239  Identities=26%  Similarity=0.296  Sum_probs=207.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEec-CchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVR-NMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      +++||++|||||++|||++++++|+++|++|++++| +.+++++..+++...  +.++.++.+|++|+++++++++++.+
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (246)
T 2uvd_A            1 MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKL--GSDAIAVRADVANAEDVTNMVKQTVD   78 (246)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            368999999999999999999999999999999999 877788777777654  45788999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          105 QGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      ++|++|+||||||+.... . +.+.++|++.+++|+.++++++++++|.|.++     +.++||++||.++..+.+    
T Consensus        79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~----  149 (246)
T 2uvd_A           79 VFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQ-----RHGRIVNIASVVGVTGNP----  149 (246)
T ss_dssp             HHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCTHHHHCCT----
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEECCHHhcCCCC----
Confidence            999999999999986542 2 67889999999999999999999999999873     368999999999887766    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHHHHHHhhcCChH
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCNTVGKLVLKNIP  260 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~  260 (313)
                                 +...|++||++++.++++++.|++++|  |+||+|+||+++|++.....  ....+....+..+..+|+
T Consensus       150 -----------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~  216 (246)
T 2uvd_A          150 -----------GQANYVAAKAGVIGLTKTSAKELASRN--ITVNAIAPGFIATDMTDVLDENIKAEMLKLIPAAQFGEAQ  216 (246)
T ss_dssp             -----------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBGGGCSSCCCTTHHHHHHHTCTTCSCBCHH
T ss_pred             -----------CCchHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeccccCcchhhcCHHHHHHHHhcCCCCCCcCHH
Confidence                       678999999999999999999999999  99999999999999876431  222223333455678999


Q ss_pred             HHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          261 QGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       261 eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      |+|+.++||++ +.+.++||+.+.+||+.
T Consensus       217 dvA~~~~~l~s-~~~~~~tG~~~~vdgG~  244 (246)
T 2uvd_A          217 DIANAVTFFAS-DQSKYITGQTLNVDGGM  244 (246)
T ss_dssp             HHHHHHHHHHS-GGGTTCCSCEEEESTTS
T ss_pred             HHHHHHHHHcC-chhcCCCCCEEEECcCc
Confidence            99999999997 78899999999988764

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=1.5e-44  Score=323.73  Aligned_cols=250  Identities=19%  Similarity=0.167  Sum_probs=206.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecC------------chhHHHHHHHHHHhCCCCceEEEEccCCC
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRN------------MAAGKDVREAIVKEIPSAKVDAMELDVSS   91 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~D~s~   91 (313)
                      +.+++||++|||||++|||+++|++|+++|++|++++|+            .+.+++...++...  +.++.++.+|++|
T Consensus         5 m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~   82 (287)
T 3pxx_A            5 MGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT--GRKAYTAEVDVRD   82 (287)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT--TSCEEEEECCTTC
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc--CCceEEEEccCCC
Confidence            457899999999999999999999999999999999997            56666666666554  5689999999999


Q ss_pred             HHHHHHHHHHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCc
Q 021391           92 LASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSE  171 (313)
Q Consensus        92 ~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~  171 (313)
                      +++++++++++.+++|++|+||||||+.....+.+.++|++.+++|+.++++++++++|+|.+       +++||++||.
T Consensus        83 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~  155 (287)
T 3pxx_A           83 RAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTS-------GASIITTGSV  155 (287)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCT-------TCEEEEECCH
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhc-------CcEEEEeccc
Confidence            999999999999999999999999998765555788999999999999999999999999844       6899999999


Q ss_pred             cccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHh-----
Q 021391          172 AHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRG-----  246 (313)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~-----  246 (313)
                      ++..+....    ...+...+++...|++||++++.|+++++.|++++|  |+||+|+||+++|++.........     
T Consensus       156 ~~~~~~~~~----~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~  229 (287)
T 3pxx_A          156 AGLIAAAQP----PGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQS--IRANVIHPTNVNTDMLNSAPMYRQFRPDL  229 (287)
T ss_dssp             HHHHHHHCC----C-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEESSBSSTTTSSHHHHHHHCTTS
T ss_pred             hhccccccc----ccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEecCccccccccccchhhhhcccc
Confidence            887665211    011112223677899999999999999999999999  999999999999999764311110     


Q ss_pred             -------HHH------HHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          247 -------FCN------TVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       247 -------~~~------~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                             ...      ..+ .+..+|+|+|++++||++ +.+.++||+.|.+||+..
T Consensus       230 ~~~~~~~~~~~~~~~~~~~-~~~~~p~dva~~v~fL~s-~~a~~itG~~i~vdGG~~  284 (287)
T 3pxx_A          230 EAPSRADALLAFPAMQAMP-TPYVEASDISNAVCFLAS-DESRYVTGLQFKVDAGAM  284 (287)
T ss_dssp             SSCCHHHHHHHGGGGCSSS-CSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             ccchhHHHHhhhhhhcccC-CCCCCHHHHHhhHheecc-hhhcCCCCceEeECchhh
Confidence                   000      111 456789999999999998 889999999999887754

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=2.4e-44  Score=323.63  Aligned_cols=244  Identities=22%  Similarity=0.249  Sum_probs=207.5

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      ...+++||++|||||++|||+++|++|+++|++|++++|+.+...+...+..... +.++.++.+|++|+++++++++++
T Consensus        41 ~~~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~  119 (291)
T 3ijr_A           41 GSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKE-GVKCVLLPGDLSDEQHCKDIVQET  119 (291)
T ss_dssp             CCSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT-TCCEEEEESCTTSHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHHHHH
Confidence            3456899999999999999999999999999999999998865444443333332 568999999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCC--CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccC
Q 021391          103 NSQGRPLNILINNAGIMAS--PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSE  179 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~  179 (313)
                      .+++|++|+||||||+...  +. +.+.++|++.+++|+.++++++++++|+|.+       +++||++||..+..+.+ 
T Consensus       120 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~~~-  191 (291)
T 3ijr_A          120 VRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ-------GDVIINTASIVAYEGNE-  191 (291)
T ss_dssp             HHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT-------TCEEEEECCTHHHHCCT-
T ss_pred             HHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh-------CCEEEEEechHhcCCCC-
Confidence            9999999999999998643  22 6788999999999999999999999999855       67999999999988766 


Q ss_pred             CCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc---chhHhHHHHHHHhhc
Q 021391          180 GIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN---GILRGFCNTVGKLVL  256 (313)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~---~~~~~~~~~~~~~~~  256 (313)
                                    +...|++||+|++.|+++++.|++++|  |+||+|+||+++|++....   .....+....+..+.
T Consensus       192 --------------~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~  255 (291)
T 3ijr_A          192 --------------TLIDYSATKGAIVAFTRSLSQSLVQKG--IRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNVPMQRP  255 (291)
T ss_dssp             --------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSTHHHHHSCHHHHHHTTTTSTTSSC
T ss_pred             --------------CChhHHHHHHHHHHHHHHHHHHHhhcC--EEEEEEeeCCCcCCcccccCCHHHHHHHHccCCCCCC
Confidence                          678999999999999999999999999  9999999999999986432   111222233455677


Q ss_pred             CChHHHHHHHHHHHccCCccCCCceeecCCcccCCC
Q 021391          257 KNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPN  292 (313)
Q Consensus       257 ~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~  292 (313)
                      .+|+|+|++++||++ +.+.++||+.+.+||+....
T Consensus       256 ~~p~dvA~~v~~L~s-~~~~~itG~~i~vdGG~~~~  290 (291)
T 3ijr_A          256 GQPYELAPAYVYLAS-SDSSYVTGQMIHVNGGVIVN  290 (291)
T ss_dssp             BCGGGTHHHHHHHHS-GGGTTCCSCEEEESSSCCCC
T ss_pred             cCHHHHHHHHHHHhC-CccCCCcCCEEEECCCcccC
Confidence            899999999999998 78899999999998876543

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-43  Score=315.19  Aligned_cols=246  Identities=22%  Similarity=0.256  Sum_probs=207.7

Q ss_pred             hccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHH
Q 021391           21 VTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFAS  100 (313)
Q Consensus        21 ~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~  100 (313)
                      +....+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.... +.++.++.+|++|+++++++++
T Consensus        13 ~~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~   91 (267)
T 1vl8_A           13 MKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDVSNYEEVKKLLE   91 (267)
T ss_dssp             ----CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHHHHHHHH
Confidence            345566899999999999999999999999999999999999988888777773322 4578899999999999999999


Q ss_pred             HHhhcCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc-ccccc
Q 021391          101 EYNSQGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA-HRFAY  177 (313)
Q Consensus       101 ~~~~~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~-~~~~~  177 (313)
                      ++.+++|++|+||||||+.... . +.+.++|++.+++|+.++++++++++|.|.+     ++.++||++||.+ +..+.
T Consensus        92 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-----~~~g~iv~isS~~~~~~~~  166 (267)
T 1vl8_A           92 AVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRE-----SDNPSIINIGSLTVEEVTM  166 (267)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT-----CSSCEEEEECCGGGTCCCS
T ss_pred             HHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH-----cCCcEEEEECCcchhccCC
Confidence            9999999999999999986542 2 6788999999999999999999999999987     4468999999998 76655


Q ss_pred             cCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----hhHhHHHHHHH
Q 021391          178 SEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----ILRGFCNTVGK  253 (313)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----~~~~~~~~~~~  253 (313)
                      +               +...|++||++++.++++++.|++++|  |+||+|+||+++|++.....    ....+....+.
T Consensus       167 ~---------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~  229 (267)
T 1vl8_A          167 P---------------NISAYAASKGGVASLTKALAKEWGRYG--IRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPL  229 (267)
T ss_dssp             S---------------SCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTT
T ss_pred             C---------------CChhHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeccCccccccccccChHHHHHHHhhCCC
Confidence            5               677999999999999999999999999  99999999999999865321    11122223344


Q ss_pred             hhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          254 LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       254 ~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      .+..+|+|+|+.++||++ +.+.++||+.+.+||+..
T Consensus       230 ~~~~~p~dvA~~v~~l~s-~~~~~itG~~i~vdGG~~  265 (267)
T 1vl8_A          230 GRTGVPEDLKGVAVFLAS-EEAKYVTGQIIFVDGGWT  265 (267)
T ss_dssp             SSCBCGGGGHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             CCCcCHHHHHHHHHHHcC-ccccCCcCCeEEECCCCC
Confidence            567899999999999998 778999999999887653

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=1.3e-43  Score=317.86  Aligned_cols=254  Identities=16%  Similarity=0.154  Sum_probs=203.9

Q ss_pred             CCCCCEEEEeCCC--CchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           26 DGTGLTAIVTGAS--SGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        26 ~~~gk~~lItGas--~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      +++||++|||||+  +|||+++|++|+++|++|++++|+.+ .++..+++....+  .+.++.+|++|+++++++++++.
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~   94 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFG--SDLVVKCDVSLDEDIKNLKKFLE   94 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcC--CeEEEEcCCCCHHHHHHHHHHHH
Confidence            3899999999999  99999999999999999999999875 5555666665532  37889999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCC-----CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccc
Q 021391          104 SQGRPLNILINNAGIMAS-----PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAY  177 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~-----~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~  177 (313)
                      +++|++|+||||||+...     +. +.+.++|++.+++|+.++++++++++|.|.+     + +++||++||.++..+.
T Consensus        95 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-----~-~g~iv~isS~~~~~~~  168 (285)
T 2p91_A           95 ENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEG-----R-NGAIVTLSYYGAEKVV  168 (285)
T ss_dssp             HHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTT-----S-CCEEEEEECGGGTSBC
T ss_pred             HHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH-----c-CCEEEEEccchhccCC
Confidence            999999999999998643     23 6788999999999999999999999999864     2 5899999999988766


Q ss_pred             cCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----hhHhHHHHHHH
Q 021391          178 SEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----ILRGFCNTVGK  253 (313)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----~~~~~~~~~~~  253 (313)
                      +               +...|++||++++.++++++.|++++|  |+||+|+||+++|++.....    ....+....+.
T Consensus       169 ~---------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~  231 (285)
T 2p91_A          169 P---------------HYNVMGIAKAALESTVRYLAYDIAKHG--HRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPF  231 (285)
T ss_dssp             T---------------TTTHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTT
T ss_pred             C---------------CccHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEEeCcccCchhhcccchHHHHHHHHhcCCC
Confidence            5               667899999999999999999999999  99999999999999865431    11222233445


Q ss_pred             hhcCChHHHHHHHHHHHccCCccCCCceeecCCcc-cCCCccCCCHHHHHHHHH
Q 021391          254 LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNI-YKPNSQGQNMELAKKLWD  306 (313)
Q Consensus       254 ~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~-~~~~~~~~~~~~~~~~~~  306 (313)
                      .+..+|+|+|+.++||++ +.+.++||+++.++|+ ...+....|++.+++||+
T Consensus       232 ~~~~~~~dva~~~~~l~s-~~~~~~tG~~~~vdgg~~~~~~~~~~~~~~~~lw~  284 (285)
T 2p91_A          232 GKPITIEDVGDTAVFLCS-DWARAITGEVVHVDNGYHIMGVFGREEEIKKEVYG  284 (285)
T ss_dssp             SSCCCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTGGGBSCC------------
T ss_pred             CCCcCHHHHHHHHHHHcC-CcccCCCCCEEEECCCcccccccCChHHHHHHhcC
Confidence            567899999999999997 7788999998886655 455677889999999997

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.8e-43  Score=315.70  Aligned_cols=247  Identities=24%  Similarity=0.237  Sum_probs=208.4

Q ss_pred             hccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHH
Q 021391           21 VTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFAS  100 (313)
Q Consensus        21 ~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~  100 (313)
                      +...|+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...  + ++.++.+|++|+++++++++
T Consensus        21 ~~~~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~-~~~~~~~Dv~d~~~v~~~~~   97 (276)
T 2b4q_A           21 MHPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY--G-DCQAIPADLSSEAGARRLAQ   97 (276)
T ss_dssp             CCTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTS--S-CEEECCCCTTSHHHHHHHHH
T ss_pred             cccccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--C-ceEEEEeeCCCHHHHHHHHH
Confidence            33456789999999999999999999999999999999999998888777776432  2 78899999999999999999


Q ss_pred             HHhhcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccccc
Q 021391          101 EYNSQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYS  178 (313)
Q Consensus       101 ~~~~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~  178 (313)
                      ++.+.++++|+||||||+....  .+.+.++|++.+++|+.++++++++++|.|.++.. ....++||++||.++..+.+
T Consensus        98 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~-~~~~g~iV~isS~~~~~~~~  176 (276)
T 2b4q_A           98 ALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSAS-AENPARVINIGSVAGISAMG  176 (276)
T ss_dssp             HHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCC-SSSCEEEEEECCGGGTCCCC
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccC-CCCCCEEEEECCHHHcCCCC
Confidence            9999999999999999986542  26788999999999999999999999999987420 01128999999999887655


Q ss_pred             CCCCCCCCCCCCCCCccc-cchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--chhHhHHH--HHHH
Q 021391          179 EGIRFDKINDESAYNSFG-AYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--GILRGFCN--TVGK  253 (313)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~-~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--~~~~~~~~--~~~~  253 (313)
                                     ... .|++||++++.++++++.|++++|  |+||+|+||+++|++....  .....+..  ..+.
T Consensus       177 ---------------~~~~~Y~asK~a~~~~~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~  239 (276)
T 2b4q_A          177 ---------------EQAYAYGPSKAALHQLSRMLAKELVGEH--INVNVIAPGRFPSRMTRHIANDPQALEADSASIPM  239 (276)
T ss_dssp             ---------------CSCTTHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCCCSTTTHHHHHCHHHHHHHHHTSTT
T ss_pred             ---------------CCccccHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeccCcCcchhhcchhHHHHHHhhcCCCC
Confidence                           456 899999999999999999999999  9999999999999986532  11122222  3344


Q ss_pred             hhcCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          254 LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       254 ~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      .+..+|+|+|+.++||++ +.+.++||+++.+||+.
T Consensus       240 ~r~~~p~dvA~~v~~l~s-~~~~~~tG~~i~vdGG~  274 (276)
T 2b4q_A          240 GRWGRPEEMAALAISLAG-TAGAYMTGNVIPIDGGF  274 (276)
T ss_dssp             SSCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTT
T ss_pred             CCcCCHHHHHHHHHHHhC-ccccCCCCCEEEeCCCc
Confidence            567899999999999998 77889999999988764

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=8.4e-44  Score=316.84  Aligned_cols=243  Identities=22%  Similarity=0.268  Sum_probs=205.1

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc-hhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM-AAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFAS  100 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~  100 (313)
                      .+.|+++||++|||||++|||+++|++|+++|++|++++|+. +..+...+++...  +.++.++.+|++|+++++++++
T Consensus        22 ~~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~   99 (271)
T 4iin_A           22 SNAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK--GYKAAVIKFDAASESDFIEAIQ   99 (271)
T ss_dssp             --CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHH
T ss_pred             hhhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHH
Confidence            356789999999999999999999999999999999999954 4455555555544  5689999999999999999999


Q ss_pred             HHhhcCCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccccc
Q 021391          101 EYNSQGRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYS  178 (313)
Q Consensus       101 ~~~~~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~  178 (313)
                      ++.+.++++|+||||||+.....  +.+.+++++.+++|+.+++++++.++|.|.+.     +.++||++||.++..+.+
T Consensus       100 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~  174 (271)
T 4iin_A          100 TIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKS-----RFGSVVNVASIIGERGNM  174 (271)
T ss_dssp             HHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHHCCT
T ss_pred             HHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhc-----CCCEEEEEechhhcCCCC
Confidence            99999999999999999876533  67889999999999999999999999999883     368999999999988766


Q ss_pred             CCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHHHHHHhhc
Q 021391          179 EGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCNTVGKLVL  256 (313)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~  256 (313)
                                     +...|++||+|++.++++++.|++++|  |+||+|+||+++|++.....  ....+....+..+.
T Consensus       175 ---------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  237 (271)
T 4iin_A          175 ---------------GQTNYSASKGGMIAMSKSFAYEGALRN--IRFNSVTPGFIETDMNANLKDELKADYVKNIPLNRL  237 (271)
T ss_dssp             ---------------TCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECSBCCC------------CGGGCTTCSC
T ss_pred             ---------------CchHhHHHHHHHHHHHHHHHHHHHHhC--cEEEEEEeCcccCCchhhhcHHHHHHHHhcCCcCCC
Confidence                           678999999999999999999999999  99999999999999876542  12222233455667


Q ss_pred             CChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          257 KNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       257 ~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      .+|+|+|++++||++ +.+.++||+.+.+||+.
T Consensus       238 ~~p~dvA~~i~~l~s-~~~~~itG~~i~vdGG~  269 (271)
T 4iin_A          238 GSAKEVAEAVAFLLS-DHSSYITGETLKVNGGL  269 (271)
T ss_dssp             BCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTS
T ss_pred             cCHHHHHHHHHHHhC-CCcCCCcCCEEEeCCCe
Confidence            899999999999998 78899999999988765

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=2e-43  Score=312.48  Aligned_cols=242  Identities=19%  Similarity=0.230  Sum_probs=206.2

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .|+++||++|||||++|||++++++|+++|++|++++|+.+++++..+++....++.++.++.+|++|+++++++++++.
T Consensus         2 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (260)
T 2z1n_A            2 DLGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKAR   81 (260)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999999998888888777654333378999999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCC-CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          104 SQGRPLNILINNAGIMAS-PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~-~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      +++| +|+||||||+... +. +.+.++|++.+++|+.++++++++++|.|.+.     +.++||++||..+..+.+   
T Consensus        82 ~~~g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~---  152 (260)
T 2z1n_A           82 DLGG-ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEK-----GWGRMVYIGSVTLLRPWQ---  152 (260)
T ss_dssp             HTTC-CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCT---
T ss_pred             HhcC-CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEECchhhcCCCC---
Confidence            9998 9999999997644 22 67889999999999999999999999999873     368999999999887665   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccc----------cch---hHhHH
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY----------NGI---LRGFC  248 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~----------~~~---~~~~~  248 (313)
                                  +...|++||++++.++++++.|++++|  |+||+|+||+++|++...          ...   ...+.
T Consensus       153 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (260)
T 2z1n_A          153 ------------DLALSNIMRLPVIGVVRTLALELAPHG--VTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMA  218 (260)
T ss_dssp             ------------TBHHHHHHTHHHHHHHHHHHHHHGGGT--EEEEEEEECHHHHCCCC----------------------
T ss_pred             ------------CCchhHHHHHHHHHHHHHHHHHHhhhC--eEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHH
Confidence                        678999999999999999999999999  999999999999998661          110   11122


Q ss_pred             HHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          249 NTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       249 ~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      ...+..+..+|+|+|+.++||++ +.+.++||+++.+||+.
T Consensus       219 ~~~p~~r~~~~~dva~~v~~l~s-~~~~~~tG~~i~vdGG~  258 (260)
T 2z1n_A          219 SRIPMGRVGKPEELASVVAFLAS-EKASFITGAVIPVDGGA  258 (260)
T ss_dssp             -CCTTSSCCCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTT
T ss_pred             hcCCCCCccCHHHHHHHHHHHhC-ccccCCCCCEEEeCCCc
Confidence            22344567799999999999998 77899999999988764

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=1.5e-43  Score=312.34  Aligned_cols=244  Identities=22%  Similarity=0.228  Sum_probs=209.4

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEe-cCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAV-RNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFAS  100 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~  100 (313)
                      ....+.++|++|||||++|||+++|++|+++|++|++++ |+.+..++..+++...  +.++.++.+|++|.++++++++
T Consensus         6 ~~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~   83 (256)
T 3ezl_A            6 HHHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL--GFDFYASEGNVGDWDSTKQAFD   83 (256)
T ss_dssp             -------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCeeEEEecCCCCHHHHHHHHH
Confidence            344567899999999999999999999999999999988 6777777777777655  5579999999999999999999


Q ss_pred             HHhhcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccccc
Q 021391          101 EYNSQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYS  178 (313)
Q Consensus       101 ~~~~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~  178 (313)
                      ++.++++++|+||||||+....  .+.+.++|++.+++|+.++++++++++|.|.+.     ..++||++||.++..+.+
T Consensus        84 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~  158 (256)
T 3ezl_A           84 KVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVER-----GWGRIINISSVNGQKGQF  158 (256)
T ss_dssp             HHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCCCGGGSCS
T ss_pred             HHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCEEEEEcchhhccCCC
Confidence            9999999999999999987543  277889999999999999999999999999983     368999999999988766


Q ss_pred             CCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--chhHhHHHHHHHhhc
Q 021391          179 EGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--GILRGFCNTVGKLVL  256 (313)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--~~~~~~~~~~~~~~~  256 (313)
                                     +...|++||+|++.++++++.|++++|  |+||+|+||+++|++....  .....+....+..+.
T Consensus       159 ---------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  221 (256)
T 3ezl_A          159 ---------------GQTNYSTAKAGIHGFTMSLAQEVATKG--VTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRL  221 (256)
T ss_dssp             ---------------CCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHTSCHHHHHHHHHHSTTSSC
T ss_pred             ---------------CCcccHHHHHHHHHHHHHHHHHHHHhC--CEEEEEEECcccCccccccCHHHHHHHHhcCCCCCC
Confidence                           678999999999999999999999999  9999999999999987654  233344455566677


Q ss_pred             CChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          257 KNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       257 ~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      .+|+|+|+.++||++ +.+.++||+.+.+||+..
T Consensus       222 ~~~~dva~~~~~l~s-~~~~~~tG~~i~vdgG~~  254 (256)
T 3ezl_A          222 GSPDEIGSIVAWLAS-EESGFSTGADFSLNGGLH  254 (256)
T ss_dssp             BCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTSC
T ss_pred             cCHHHHHHHHHHHhC-CcccCCcCcEEEECCCEe
Confidence            899999999999998 788999999999887754

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=8.5e-44  Score=323.86  Aligned_cols=242  Identities=20%  Similarity=0.208  Sum_probs=205.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecC------------chhHHHHHHHHHHhCCCCceEEEEccCCC
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRN------------MAAGKDVREAIVKEIPSAKVDAMELDVSS   91 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~D~s~   91 (313)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++...  +.++.++.+|++|
T Consensus        41 m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d  118 (317)
T 3oec_A           41 MNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ--GRRIIARQADVRD  118 (317)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTC
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhc--CCeEEEEECCCCC
Confidence            345899999999999999999999999999999999886            55666666666554  5689999999999


Q ss_pred             HHHHHHHHHHHhhcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEEC
Q 021391           92 LASVRKFASEYNSQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVS  169 (313)
Q Consensus        92 ~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~is  169 (313)
                      +++++++++++.+++|+||+||||||+....  .+.+.++|++.+++|+.++++++++++|.|.+.    +.+|+||++|
T Consensus       119 ~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~----~~~g~Iv~is  194 (317)
T 3oec_A          119 LASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIER----GQGGSVIFVS  194 (317)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT----CSCEEEEEEC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc----CCCCEEEEEC
Confidence            9999999999999999999999999987542  377889999999999999999999999999873    2368999999


Q ss_pred             CccccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchh-----
Q 021391          170 SEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGIL-----  244 (313)
Q Consensus       170 S~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~-----  244 (313)
                      |.++..+.+               +...|++||+|++.|+++++.|++++|  |+||+|+||+++|++.......     
T Consensus       195 S~~~~~~~~---------------~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~  257 (317)
T 3oec_A          195 STVGLRGAP---------------GQSHYAASKHGVQGLMLSLANEVGRHN--IRVNSVNPGAVNTEMALNEKLLKMFLP  257 (317)
T ss_dssp             CGGGSSCCT---------------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBSSHHHHCHHHHHHHCT
T ss_pred             cHHhcCCCC---------------CCcchHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCcccCccccchhhhhhhhh
Confidence            999988766               678999999999999999999999999  9999999999999975432110     


Q ss_pred             -------HhHHHH------HHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          245 -------RGFCNT------VGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       245 -------~~~~~~------~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                             ......      .+ .+..+|+|+|++++||++ +.+.++||+.|.+||+..
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~p-~~~~~pedvA~av~fL~s-~~a~~itG~~i~vdGG~~  314 (317)
T 3oec_A          258 HLENPTREDAAELFSQLTLLP-IPWVEPEDVSNAVAWLAS-DEARYIHGAAIPVDGGQL  314 (317)
T ss_dssp             TCSSCCHHHHHHHHTTTCSSS-SSSBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTGG
T ss_pred             hccccchhHHHHHHhhhccCC-CCCCCHHHHHHHHHHHcC-CcccCCCCCEEEECcchh
Confidence                   000110      11 345689999999999998 889999999999887754

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=2e-43  Score=312.42  Aligned_cols=240  Identities=28%  Similarity=0.282  Sum_probs=202.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchh-HHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAA-GKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      ++||++|||||++|||++++++|+++|++|++++|+.+. +++..+++...+ +.++.++.+|++|+++++++++++.++
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~   80 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH-GVKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH-TSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhcc-CCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            689999999999999999999999999999999999887 777777775532 346889999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          106 GRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      +|++|+||||||+.... . +.+.++|++.+++|+.++++++++++|.|.++     +.++||++||.++..+.+     
T Consensus        81 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~-----  150 (260)
T 1x1t_A           81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ-----GFGRIINIASAHGLVASA-----  150 (260)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCT-----
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCEEEEECcHHhCcCCC-----
Confidence            99999999999986542 2 67889999999999999999999999999873     368999999999887665     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc-------------hhHhH-HH
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG-------------ILRGF-CN  249 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~-------------~~~~~-~~  249 (313)
                                +...|++||++++.++++++.|++++|  |+||+|+||+++|++.....             ....+ ..
T Consensus       151 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (260)
T 1x1t_A          151 ----------NKSAYVAAKHGVVGFTKVTALETAGQG--ITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSE  218 (260)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCBCC------------------------CHHH
T ss_pred             ----------CCchHHHHHHHHHHHHHHHHHHhccCC--EEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhc
Confidence                      678999999999999999999999999  99999999999999865421             01111 23


Q ss_pred             HHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          250 TVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       250 ~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      ..+..+..+|+|+|+.++||++ +.+.++||+++.+||+..
T Consensus       219 ~~p~~~~~~p~dva~~~~~l~s-~~~~~~tG~~~~vdgG~~  258 (260)
T 1x1t_A          219 KQPSLQFVTPEQLGGTAVFLAS-DAAAQITGTTVSVDGGWT  258 (260)
T ss_dssp             HCTTCCCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             cCCCCCCcCHHHHHHHHHHHhC-hhhcCCCCCEEEECCCcc
Confidence            3345567899999999999998 778999999999887643

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.6e-43  Score=311.60  Aligned_cols=240  Identities=23%  Similarity=0.259  Sum_probs=180.7

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .|+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|+++++++++++.
T Consensus         4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   81 (253)
T 3qiv_A            4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD--GGTAISVAVDVSDPESAKAMADRTL   81 (253)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            57789999999999999999999999999999999999999999988888765  5689999999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCC----C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccccc
Q 021391          104 SQGRPLNILINNAGIMAS----P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYS  178 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~----~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~  178 (313)
                      +.++++|+||||||+...    + .+.+.++|++.+++|+.++++++++++|.|.+.     +.++||++||.++..   
T Consensus        82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~---  153 (253)
T 3qiv_A           82 AEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKR-----GGGAIVNQSSTAAWL---  153 (253)
T ss_dssp             HHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----TCEEEEEECC--------
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-----CCCEEEEECCccccC---
Confidence            999999999999998421    2 267889999999999999999999999999883     478999999998763   


Q ss_pred             CCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc---chhHhHHHHHHHhh
Q 021391          179 EGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN---GILRGFCNTVGKLV  255 (313)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~---~~~~~~~~~~~~~~  255 (313)
                                     +...|++||++++.++++++.|++++|  |+||+|+||+++|++....   .+...+.+..+..+
T Consensus       154 ---------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  216 (253)
T 3qiv_A          154 ---------------YSNYYGLAKVGINGLTQQLSRELGGRN--IRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPLSR  216 (253)
T ss_dssp             ---------------------CCHHHHHHHHHHHHHHTTTTT--EEEEEEEC----------------------------
T ss_pred             ---------------CCchhHHHHHHHHHHHHHHHHHHhhcC--eEEEEEEecCCcccchhhcCcHHHHHHHhccCCCCC
Confidence                           456799999999999999999999999  9999999999999987653   23344455566677


Q ss_pred             cCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          256 LKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       256 ~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      ..+|+|+|++++||++ +...++||+++..||+...
T Consensus       217 ~~~~~dva~~~~~l~s-~~~~~~tG~~~~vdgG~~~  251 (253)
T 3qiv_A          217 MGTPDDLVGMCLFLLS-DEASWITGQIFNVDGGQII  251 (253)
T ss_dssp             ---CCHHHHHHHHHHS-GGGTTCCSCEEEC------
T ss_pred             CCCHHHHHHHHHHHcC-ccccCCCCCEEEECCCeec
Confidence            8899999999999998 7889999999998877654

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=2.5e-43  Score=312.34  Aligned_cols=243  Identities=19%  Similarity=0.243  Sum_probs=208.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .|+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.... +.++.++.+|++|+++++++++++.
T Consensus         2 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   80 (263)
T 3ai3_A            2 DMGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKF-GVRVLEVAVDVATPEGVDAVVESVR   80 (263)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999999988888777776542 3468899999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCC-C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          104 SQGRPLNILINNAGIMAS-P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~-~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      +++|++|+||||||+... + .+.+.++|++.+++|+.++++++++++|.|.++     ..++||++||.++..+.+   
T Consensus        81 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~---  152 (263)
T 3ai3_A           81 SSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRAR-----GGGAIIHNASICAVQPLW---  152 (263)
T ss_dssp             HHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCT---
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEECchhhcCCCC---
Confidence            999999999999998653 2 267889999999999999999999999999873     368999999999887655   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc-------------hhHhHH
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG-------------ILRGFC  248 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~-------------~~~~~~  248 (313)
                                  +...|++||++++.++++++.|++++|  |+||+|+||+++|++.....             ....+.
T Consensus       153 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (263)
T 3ai3_A          153 ------------YEPIYNVTKAALMMFSKTLATEVIKDN--IRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVA  218 (263)
T ss_dssp             ------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHH
T ss_pred             ------------CcchHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHH
Confidence                        677899999999999999999999999  99999999999999754320             111122


Q ss_pred             HH-HHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          249 NT-VGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       249 ~~-~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      .. .+..+..+|+|+|+.++||++ +.+.++||+.+.++|+..
T Consensus       219 ~~~~p~~~~~~~~dvA~~~~~l~s-~~~~~~~G~~~~vdgG~~  260 (263)
T 3ai3_A          219 DEHAPIKRFASPEELANFFVFLCS-ERATYSVGSAYFVDGGML  260 (263)
T ss_dssp             HHHCTTCSCBCHHHHHHHHHHHTS-TTCTTCCSCEEEESTTCC
T ss_pred             hcCCCCCCCcCHHHHHHHHHHHcC-ccccCCCCcEEEECCCcc
Confidence            22 344567899999999999998 778899999999887654

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=2.5e-43  Score=312.65  Aligned_cols=247  Identities=15%  Similarity=0.156  Sum_probs=211.5

Q ss_pred             cCCCCCCCEEEEeCCC--CchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGAS--SGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFAS  100 (313)
Q Consensus        23 ~~~~~~gk~~lItGas--~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~  100 (313)
                      ++++++||++|||||+  +|||+++|++|+++|++|++++|+.+..+ ..+++..+.+..++.++.+|++|+++++++++
T Consensus         1 M~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   79 (266)
T 3oig_A            1 MNFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEK-SVHELAGTLDRNDSIILPCDVTNDAEIETCFA   79 (266)
T ss_dssp             CCSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHHHHTSSSCCCEEEECCCSSSHHHHHHHH
T ss_pred             CccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHH-HHHHHHHhcCCCCceEEeCCCCCHHHHHHHHH
Confidence            3568999999999999  67999999999999999999999865444 44555555544579999999999999999999


Q ss_pred             HHhhcCCCeeEEEEcccCCC-----CCC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccc
Q 021391          101 EYNSQGRPLNILINNAGIMA-----SPF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHR  174 (313)
Q Consensus       101 ~~~~~~g~id~lv~~ag~~~-----~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~  174 (313)
                      ++.++++++|+||||||+..     .+. +.+.+++++.+++|+.++++++++++|.|.+       +|+||++||.++.
T Consensus        80 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~g~iv~isS~~~~  152 (266)
T 3oig_A           80 SIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE-------GGSIVTLTYLGGE  152 (266)
T ss_dssp             HHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT-------CEEEEEEECGGGT
T ss_pred             HHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC-------CceEEEEeccccc
Confidence            99999999999999999875     222 7788999999999999999999999999865       6899999999998


Q ss_pred             ccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----hhHhHHHH
Q 021391          175 FAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----ILRGFCNT  250 (313)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----~~~~~~~~  250 (313)
                      .+.+               ....|++||+|++.|+++++.|++++|  |+||+|+||+++|++.....    ....+...
T Consensus       153 ~~~~---------------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  215 (266)
T 3oig_A          153 LVMP---------------NYNVMGVAKASLDASVKYLAADLGKEN--IRVNSISAGPIRTLSAKGISDFNSILKDIEER  215 (266)
T ss_dssp             SCCT---------------TTHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCCCSGGGTTCTTHHHHHHHHHHH
T ss_pred             ccCC---------------CcchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEecCcccccccccccchHHHHHHHHhc
Confidence            8766               678999999999999999999999999  99999999999999877542    22333444


Q ss_pred             HHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCCccC
Q 021391          251 VGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQG  295 (313)
Q Consensus       251 ~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~~~  295 (313)
                      .+..+..+|+|+|+.++||++ +.+.++||+.+.+||+.......
T Consensus       216 ~~~~~~~~p~dva~~v~~l~s-~~~~~~tG~~i~vdGG~~~~~~~  259 (266)
T 3oig_A          216 APLRRTTTPEEVGDTAAFLFS-DMSRGITGENLHVDSGFHITARL  259 (266)
T ss_dssp             STTSSCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGGCCCC
T ss_pred             CCCCCCCCHHHHHHHHHHHcC-CchhcCcCCEEEECCCeEEeeec
Confidence            555677899999999999998 78899999999988776655443

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=1.9e-43  Score=317.78  Aligned_cols=247  Identities=17%  Similarity=0.178  Sum_probs=205.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEe-cCchhHHHHHHHHHHhCCCCceEEEEccCCCHH---------
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAV-RNMAAGKDVREAIVKEIPSAKVDAMELDVSSLA---------   93 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~---------   93 (313)
                      .++++||++|||||++|||+++|++|+++|++|++++ |+.+.+++..+++.... +.++.++++|+++++         
T Consensus         4 m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~   82 (291)
T 1e7w_A            4 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR-PNSAITVQADLSNVATAPVSGADG   82 (291)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSCBCCCC----
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhc-CCeeEEEEeecCCccccccccccc
Confidence            4568999999999999999999999999999999999 99988888888876333 457899999999999         


Q ss_pred             --------HHHHHHHHHhhcCCCeeEEEEcccCCCC-CC-ccC--------------ccchhhhhhhhhhHHHHHHHHHH
Q 021391           94 --------SVRKFASEYNSQGRPLNILINNAGIMAS-PF-MLS--------------KDNIELQFATNHLGHFLLTHLLL  149 (313)
Q Consensus        94 --------~v~~~~~~~~~~~g~id~lv~~ag~~~~-~~-~~~--------------~~~~~~~~~~n~~~~~~l~~~~~  149 (313)
                              +++++++++.+++|++|+||||||+... +. +.+              .++|++++++|+.++++++++++
T Consensus        83 ~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  162 (291)
T 1e7w_A           83 SAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFA  162 (291)
T ss_dssp             CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             ccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHH
Confidence                    9999999999999999999999998643 22 556              88999999999999999999999


Q ss_pred             HHHHHhhcc-CCCCCeEEEECCccccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEe
Q 021391          150 DTMKKTAQK-SSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSL  228 (313)
Q Consensus       150 ~~l~~~~~~-~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i  228 (313)
                      |.|.++... ....++||++||..+..+.+               +...|++||++++.|+++++.|++++|  |+||+|
T Consensus       163 ~~m~~~~~~~~~~~g~Iv~isS~~~~~~~~---------------~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v  225 (291)
T 1e7w_A          163 HRVAGTPAKHRGTNYSIINMVDAMTNQPLL---------------GYTIYTMAKGALEGLTRSAALELAPLQ--IRVNGV  225 (291)
T ss_dssp             HHHHTSCGGGSCSCEEEEEECCTTTTSCCT---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEE
T ss_pred             HHHHhcCCCCCCCCcEEEEEechhhcCCCC---------------CCchhHHHHHHHHHHHHHHHHHHHhcC--eEEEEE
Confidence            999872100 00158999999999887766               678999999999999999999999999  999999


Q ss_pred             eCcccccCCccccc--hhHhHHHHHHHh-hcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          229 HPGSIVTNLFRYNG--ILRGFCNTVGKL-VLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       229 ~PG~v~t~~~~~~~--~~~~~~~~~~~~-~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      +||+++|++ . ..  ....+....+.. +..+|+|+|+.++||++ +.+.++||+++.+||+...
T Consensus       226 ~PG~v~T~~-~-~~~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s-~~~~~itG~~i~vdGG~~~  288 (291)
T 1e7w_A          226 GPGLSVLVD-D-MPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCS-SKAKYITGTCVKVDGGYSL  288 (291)
T ss_dssp             EESSBCCGG-G-SCHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             eeCCccCCc-c-CCHHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhC-CcccCccCcEEEECCCccc
Confidence            999999998 4 21  111222223444 67899999999999998 7889999999998877543

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=1.6e-43  Score=312.76  Aligned_cols=238  Identities=20%  Similarity=0.256  Sum_probs=204.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchh--HHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAA--GKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      +||++|||||++|||+++|++|+++|++|++++|+.+.  +++..+++...  +.++.++.+|++|+++++++++++.++
T Consensus         1 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   78 (258)
T 3a28_C            1 MSKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA--DQKAVFVGLDVTDKANFDSAIDEAAEK   78 (258)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            37999999999999999999999999999999999877  77777776554  457899999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCC-CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCC-CeEEEECCccccccccCCCC
Q 021391          106 GRPLNILINNAGIMAS-PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSRE-GRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~-~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~  182 (313)
                      +|++|+||||||+... +. +.+.++|++.+++|+.+++++++++.|.|.++     +. ++||++||.++..+.+    
T Consensus        79 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~~g~iv~isS~~~~~~~~----  149 (258)
T 3a28_C           79 LGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDEL-----GVKGKIINAASIAAIQGFP----  149 (258)
T ss_dssp             HTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCCEEEEECCGGGTSCCT----
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-----CCCcEEEEECcchhccCCC----
Confidence            9999999999998654 22 67889999999999999999999999999874     24 8999999999887766    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-------------chhHhHHH
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-------------GILRGFCN  249 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-------------~~~~~~~~  249 (313)
                                 +...|++||++++.++++++.|++++|  |+||+|+||+++|++....             .....+..
T Consensus       150 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (258)
T 3a28_C          150 -----------ILSAYSTTKFAVRGLTQAAAQELAPKG--HTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSS  216 (258)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHT
T ss_pred             -----------CchhHHHHHHHHHHHHHHHHHHHHhhC--eEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHh
Confidence                       678999999999999999999999999  9999999999999985431             01111112


Q ss_pred             HHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          250 TVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       250 ~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      ..+..+..+|+|+|++++||++ +.+.++||+.+.+||+..
T Consensus       217 ~~p~~r~~~p~dvA~~v~~l~s-~~~~~~tG~~i~vdGG~~  256 (258)
T 3a28_C          217 SIALGRPSVPEDVAGLVSFLAS-ENSNYVTGQVMLVDGGML  256 (258)
T ss_dssp             TCTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESSSSC
T ss_pred             cCCCCCccCHHHHHHHHHHHhC-cccCCCCCCEEEECCCEe
Confidence            2344567899999999999998 778999999999887754

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=4.1e-43  Score=307.98  Aligned_cols=235  Identities=20%  Similarity=0.216  Sum_probs=201.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      |+++||++|||||++|||++++++|+++|++|++++|+.+++++..+++       .+.++.+|++|+++++++++++.+
T Consensus         1 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~~~~~~~~~~~   73 (245)
T 1uls_A            1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------GAHPVVMDVADPASVERGFAEALA   73 (245)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-------TCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-------CCEEEEecCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999987766554332       278899999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          105 QGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      ++|++|+||||||+....  .+.+.++|++.+++|+.+++++++++.|.|.+     ++.++||++||.+ ..+.+    
T Consensus        74 ~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-----~~~g~iv~isS~~-~~~~~----  143 (245)
T 1uls_A           74 HLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMRE-----KNPGSIVLTASRV-YLGNL----  143 (245)
T ss_dssp             HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----TCCEEEEEECCGG-GGCCT----
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-----cCCCEEEEEccch-hcCCC----
Confidence            999999999999986543  26788999999999999999999999999987     4468999999988 66655    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHHHHHHhhcCChH
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCNTVGKLVLKNIP  260 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~  260 (313)
                                 +...|++||++++.++++++.|++++|  |+||+|+||+++|++.....  ....+....+..+..+|+
T Consensus       144 -----------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~  210 (245)
T 1uls_A          144 -----------GQANYAASMAGVVGLTRTLALELGRWG--IRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPL  210 (245)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTCSCBCHH
T ss_pred             -----------CchhHHHHHHHHHHHHHHHHHHHhHhC--eEEEEEEeCcCcCcchhhcCHHHHHHHHhhCCCCCCcCHH
Confidence                       678899999999999999999999999  99999999999999876432  112222333445678999


Q ss_pred             HHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          261 QGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       261 eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      |+|+.++||++ +.+.++||+.+..||+..
T Consensus       211 dvA~~v~~l~s-~~~~~~tG~~~~vdgG~~  239 (245)
T 1uls_A          211 EVAYAALFLLS-DESSFITGQVLFVDGGRT  239 (245)
T ss_dssp             HHHHHHHHHHS-GGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHHhC-chhcCCcCCEEEECCCcc
Confidence            99999999998 778899999999887654

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=2.4e-43  Score=314.97  Aligned_cols=240  Identities=24%  Similarity=0.285  Sum_probs=207.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|+++++++++++.+
T Consensus        18 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   95 (277)
T 2rhc_B           18 ATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTCDVRSVPEIEALVAAVVE   95 (277)
T ss_dssp             CCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            3689999999999999999999999999999999999998888887777654  45788999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHH--HHHhhccCCCCCeEEEECCccccccccCC
Q 021391          105 QGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDT--MKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~--l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      ++|++|+||||||+.... . +.+.++|++.+++|+.++++++++++|.  |.+.     ..++||++||.++..+.+  
T Consensus        96 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~-----~~g~iv~isS~~~~~~~~--  168 (277)
T 2rhc_B           96 RYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLER-----GTGRIVNIASTGGKQGVV--  168 (277)
T ss_dssp             HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHH-----TEEEEEEECCGGGTSCCT--
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhc-----CCeEEEEECccccccCCC--
Confidence            999999999999986542 2 6788999999999999999999999999  8773     358999999999887665  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc-------------hhHhH
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG-------------ILRGF  247 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~-------------~~~~~  247 (313)
                                   +...|++||++++.++++++.|+++.|  |+||+|+||+++|++.....             ....+
T Consensus       169 -------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  233 (277)
T 2rhc_B          169 -------------HAAPYSASKHGVVGFTKALGLELARTG--ITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRI  233 (277)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHTTTE--EEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred             -------------CCccHHHHHHHHHHHHHHHHHHHHHhC--cEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHH
Confidence                         678899999999999999999999998  99999999999999754320             01112


Q ss_pred             HHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          248 CNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       248 ~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      ....+..+..+|+|+|++++||++ +.+.++||+.+.++|+.
T Consensus       234 ~~~~p~~r~~~~~dvA~~v~~l~s-~~~~~~tG~~~~vdGG~  274 (277)
T 2rhc_B          234 TARVPIGRYVQPSEVAEMVAYLIG-PGAAAVTAQALNVCGGL  274 (277)
T ss_dssp             HHHSTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTC
T ss_pred             HhcCCCCCCcCHHHHHHHHHHHhC-chhcCCCCcEEEECCCc
Confidence            222344567899999999999997 77889999999988764

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=1.5e-43  Score=314.97  Aligned_cols=235  Identities=21%  Similarity=0.233  Sum_probs=200.0

Q ss_pred             hccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHH
Q 021391           21 VTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFAS  100 (313)
Q Consensus        21 ~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~  100 (313)
                      +....+++||++|||||++|||+++|++|+++|++|++++|+.+..            ......+++|++|+++++++++
T Consensus         6 ~~~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~   73 (269)
T 3vtz_A            6 HHHMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD------------VNVSDHFKIDVTNEEEVKEAVE   73 (269)
T ss_dssp             ----CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C------------TTSSEEEECCTTCHHHHHHHHH
T ss_pred             cccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc------------cCceeEEEecCCCHHHHHHHHH
Confidence            3456678999999999999999999999999999999999987543            1256789999999999999999


Q ss_pred             HHhhcCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccccc
Q 021391          101 EYNSQGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYS  178 (313)
Q Consensus       101 ~~~~~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~  178 (313)
                      ++.+++|++|+||||||+.... . +.+.++|++.+++|+.++++++++++|.|.+.     +.|+||++||..+..+.+
T Consensus        74 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~  148 (269)
T 3vtz_A           74 KTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAI-----GHGSIINIASVQSYAATK  148 (269)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSBCT
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCCEEEEECchhhccCCC
Confidence            9999999999999999986543 2 67889999999999999999999999999883     478999999999988766


Q ss_pred             CCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-------------chhH
Q 021391          179 EGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-------------GILR  245 (313)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-------------~~~~  245 (313)
                                     +...|++||+|++.|+++++.|+++ |  |+||+|+||+++|++....             ....
T Consensus       149 ---------------~~~~Y~asKaa~~~l~~~la~e~~~-~--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  210 (269)
T 3vtz_A          149 ---------------NAAAYVTSKHALLGLTRSVAIDYAP-K--IRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIE  210 (269)
T ss_dssp             ---------------TCHHHHHHHHHHHHHHHHHHHHHTT-T--EEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHH
T ss_pred             ---------------CChhHHHHHHHHHHHHHHHHHHhcC-C--CEEEEEEECCCcCcchhhhhhccccccchhhHHHHH
Confidence                           6789999999999999999999998 8  9999999999999985432             1122


Q ss_pred             hHHHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          246 GFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       246 ~~~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      .+....+..+..+|+|+|++++||++ +.+.++||+.+.+||+...
T Consensus       211 ~~~~~~p~~r~~~pedvA~~v~~L~s-~~~~~itG~~i~vdGG~~~  255 (269)
T 3vtz_A          211 EWGRQHPMGRIGRPEEVAEVVAFLAS-DRSSFITGACLTVDGGLLS  255 (269)
T ss_dssp             HHHHHSTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHhC-CccCCCcCcEEEECCCccc
Confidence            33344556677899999999999998 7889999999998876543

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=6.5e-44  Score=316.87  Aligned_cols=236  Identities=20%  Similarity=0.161  Sum_probs=198.3

Q ss_pred             chhccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHH
Q 021391           19 EEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKF   98 (313)
Q Consensus        19 ~~~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~   98 (313)
                      ..+.+.++++||++|||||++|||+++|++|+++|++|++++|+.+..+             ....+.+|+++.++++++
T Consensus        18 ~~~~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~-------------~~~~~~~Dv~~~~~~~~~   84 (266)
T 3uxy_A           18 LYFQSMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA-------------ADLHLPGDLREAAYADGL   84 (266)
T ss_dssp             --------CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC-------------CSEECCCCTTSHHHHHHH
T ss_pred             cchhhhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-------------hhhccCcCCCCHHHHHHH
Confidence            3444567899999999999999999999999999999999999865432             224568999999999999


Q ss_pred             HHHHhhcCCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccc
Q 021391           99 ASEYNSQGRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFA  176 (313)
Q Consensus        99 ~~~~~~~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~  176 (313)
                      ++++.+++|++|+||||||+.....  +.+.++|++.+++|+.++++++++++|+|.+.     +.|+||++||.++..+
T Consensus        85 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~~~~~  159 (266)
T 3uxy_A           85 PGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAA-----GGGAIVNVASCWGLRP  159 (266)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCSBTTBC
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEECCHHhCCC
Confidence            9999999999999999999875432  78899999999999999999999999999883     4789999999999877


Q ss_pred             ccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc---------hhHhH
Q 021391          177 YSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG---------ILRGF  247 (313)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~---------~~~~~  247 (313)
                      .+               +...|++||+|++.++++++.|++++|  |+||+|+||+++|++.....         ....+
T Consensus       160 ~~---------------~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  222 (266)
T 3uxy_A          160 GP---------------GHALYCLTKAALASLTQCMGMDHAPQG--IRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAEL  222 (266)
T ss_dssp             CT---------------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHH
T ss_pred             CC---------------CChHHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEeeCCCcchHhhhhhhcccccchHHHHHH
Confidence            66               678999999999999999999999999  99999999999999865321         11222


Q ss_pred             HHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          248 CNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       248 ~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      ....+..+..+|+|+|++++||++ +.+.++||+.+.+||+..
T Consensus       223 ~~~~p~~r~~~pedvA~~v~~L~s-~~~~~itG~~i~vdGG~~  264 (266)
T 3uxy_A          223 GRTVPLGRIAEPEDIADVVLFLAS-DAARYLCGSLVEVNGGKA  264 (266)
T ss_dssp             HTTSTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTCC
T ss_pred             HhcCCCCCCcCHHHHHHHHHHHhC-chhcCCcCCEEEECcCEe
Confidence            333445567899999999999998 788999999999888754

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=1.1e-42  Score=307.71  Aligned_cols=244  Identities=21%  Similarity=0.224  Sum_probs=209.4

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      ...+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++...  +.++.++.+|++|.++++++++++
T Consensus         8 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~   85 (260)
T 2zat_A            8 RRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE--GLSVTGTVCHVGKAEDRERLVAMA   85 (260)
T ss_dssp             --CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHH
Confidence            345688999999999999999999999999999999999998888887777654  457889999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCC--CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccC
Q 021391          103 NSQGRPLNILINNAGIMAS--PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSE  179 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~  179 (313)
                      .+.+|++|+||||||+...  +. +.+.++|++.+++|+.++++++++++|.|.+     ++.++||++||.++..+.+ 
T Consensus        86 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-----~~~g~iv~isS~~~~~~~~-  159 (260)
T 2zat_A           86 VNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEK-----RGGGSVLIVSSVGAYHPFP-  159 (260)
T ss_dssp             HHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-----TTCEEEEEECCGGGTSCCT-
T ss_pred             HHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-----cCCCEEEEEechhhcCCCC-
Confidence            9999999999999997532  22 6788999999999999999999999999987     4468999999999887665 


Q ss_pred             CCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----chhHhHHHHHHHhh
Q 021391          180 GIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----GILRGFCNTVGKLV  255 (313)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~~~~  255 (313)
                                    +...|++||++++.++++++.|++++|  |+||+|+||+++|++....    .....+....+..+
T Consensus       160 --------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  223 (260)
T 2zat_A          160 --------------NLGPYNVSKTALLGLTKNLAVELAPRN--IRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRR  223 (260)
T ss_dssp             --------------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHTCSS
T ss_pred             --------------CchhHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEECcccCccchhcccChHHHHHHHhcCCCCC
Confidence                          678999999999999999999999999  9999999999999986531    11112233344556


Q ss_pred             cCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          256 LKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       256 ~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      ..+|+|+|+.++||++ +.+.++||+.+.+||+...
T Consensus       224 ~~~~~dva~~v~~l~s-~~~~~~tG~~~~vdgG~~~  258 (260)
T 2zat_A          224 LGNPEDCAGIVSFLCS-EDASYITGETVVVGGGTAS  258 (260)
T ss_dssp             CBCGGGGHHHHHHHTS-GGGTTCCSCEEEESTTCCC
T ss_pred             CCCHHHHHHHHHHHcC-cccCCccCCEEEECCCccc
Confidence            7899999999999997 7788999999998877543

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=5.2e-43  Score=309.14  Aligned_cols=238  Identities=25%  Similarity=0.296  Sum_probs=204.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      +|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|+++++++++++.+++|+
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVSDRDQVFAAVEQARKTLGG   79 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            689999999999999999999999999999999998888887777654  457889999999999999999999999999


Q ss_pred             eeEEEEcccCCCC-CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          109 LNILINNAGIMAS-PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       109 id~lv~~ag~~~~-~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                      +|+||||||+... +. +.+.++|++.+++|+.++++++++++|.|.++    ...++||++||.++..+.+        
T Consensus        80 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~----~~~g~iv~isS~~~~~~~~--------  147 (256)
T 1geg_A           80 FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKE----GHGGKIINACSQAGHVGNP--------  147 (256)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TSCEEEEEECCGGGTSCCT--------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc----CCCCEEEEECchhhcCCCC--------
Confidence            9999999997653 22 67889999999999999999999999999873    1158999999999887766        


Q ss_pred             CCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc-------------hhHhHHHHHHH
Q 021391          187 NDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG-------------ILRGFCNTVGK  253 (313)
Q Consensus       187 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~-------------~~~~~~~~~~~  253 (313)
                             ....|++||++++.++++++.|++++|  |+||+|+||+++|++.....             ....+....+.
T Consensus       148 -------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  218 (256)
T 1geg_A          148 -------ELAVYSSSKFAVRGLTQTAARDLAPLG--ITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITL  218 (256)
T ss_dssp             -------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTT
T ss_pred             -------CchhHHHHHHHHHHHHHHHHHHHHHcC--eEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCC
Confidence                   678999999999999999999999999  99999999999999754320             01111122344


Q ss_pred             hhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          254 LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       254 ~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      .+..+|+|+|+.++||++ +.+.++||+.+.+||+..
T Consensus       219 ~r~~~p~dvA~~v~~l~s-~~~~~~tG~~i~vdGG~~  254 (256)
T 1geg_A          219 GRLSEPEDVAACVSYLAS-PDSDYMTGQSLLIDGGMV  254 (256)
T ss_dssp             CSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESSSSS
T ss_pred             CCCcCHHHHHHHHHHHhC-ccccCCCCCEEEeCCCcc
Confidence            567899999999999998 778899999999887754

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=4.6e-43  Score=308.32  Aligned_cols=238  Identities=24%  Similarity=0.270  Sum_probs=195.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc-hhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM-AAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .+++||++|||||++|||+++|++|+++|++|++++|+. +++++   ++...  +.++.++.+|++|+++++++++++.
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~   77 (249)
T 2ew8_A            3 QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNL--GRRVLTVKCDVSQPGDVEAFGKQVI   77 (249)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhc--CCcEEEEEeecCCHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999997 66554   33332  4578999999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          104 SQGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      ++++++|+||||||+.... . +.+.++|++.+++|+.++++++++++|.|.++     +.++||++||.++..+.+   
T Consensus        78 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~---  149 (249)
T 2ew8_A           78 STFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN-----GWGRIINLTSTTYWLKIE---  149 (249)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGGSCCS---
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCeEEEEEcchhhccCCC---
Confidence            9999999999999986542 2 67889999999999999999999999999873     368999999999887766   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcc-ccchh-HhHHHH--HHHhhcC
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR-YNGIL-RGFCNT--VGKLVLK  257 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~-~~~~~-~~~~~~--~~~~~~~  257 (313)
                                  +...|++||++++.++++++.|++++|  |+||+|+||+++|++.. ..... ......  .+..+..
T Consensus       150 ------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (249)
T 2ew8_A          150 ------------AYTHYISTKAANIGFTRALASDLGKDG--ITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQ  215 (249)
T ss_dssp             ------------SCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCC------------------CTTSSSCSCC
T ss_pred             ------------CchhHHHHHHHHHHHHHHHHHHHHhcC--cEEEEEecCcCcCccchhccccchhhHHHHhhCccCCCC
Confidence                        678999999999999999999999999  99999999999999865 22100 011111  2345578


Q ss_pred             ChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          258 NIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       258 ~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      +|+|+|+.++||++ +.+.++||+++.+||+..
T Consensus       216 ~p~dva~~~~~l~s-~~~~~~tG~~~~vdGG~~  247 (249)
T 2ew8_A          216 VPLDLTGAAAFLAS-DDASFITGQTLAVDGGMV  247 (249)
T ss_dssp             CTHHHHHHHHHHTS-GGGTTCCSCEEEESSSCC
T ss_pred             CHHHHHHHHHHHcC-cccCCCCCcEEEECCCcc
Confidence            99999999999998 778999999999887643

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.9e-43  Score=318.73  Aligned_cols=245  Identities=22%  Similarity=0.240  Sum_probs=206.8

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCC---ceEEEEccCCCHHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA---KVDAMELDVSSLASVRKF   98 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~---~~~~~~~D~s~~~~v~~~   98 (313)
                      ...|+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++...  +.   ++.++.+|++|+++++++
T Consensus        19 ~~m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~~Dv~d~~~v~~~   96 (297)
T 1xhl_A           19 SHMARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKA--GVPAEKINAVVADVTEASGQDDI   96 (297)
T ss_dssp             ----CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCGGGEEEEECCTTSHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCCCceEEEEecCCCCHHHHHHH
Confidence            3446789999999999999999999999999999999999998888888877654  33   789999999999999999


Q ss_pred             HHHHhhcCCCeeEEEEcccCCCC-C--C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccc
Q 021391           99 ASEYNSQGRPLNILINNAGIMAS-P--F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHR  174 (313)
Q Consensus        99 ~~~~~~~~g~id~lv~~ag~~~~-~--~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~  174 (313)
                      ++++.+++|++|+||||||+... +  . +.+.++|++.+++|+.+++++++++.|.|.+     +. |+||++||.++.
T Consensus        97 ~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-----~~-g~IV~isS~~~~  170 (297)
T 1xhl_A           97 INTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIK-----TK-GEIVNVSSIVAG  170 (297)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-----TT-CEEEEECCGGGS
T ss_pred             HHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHh-----cC-CEEEEEcCchhc
Confidence            99999999999999999997643 2  3 6788999999999999999999999999987     33 899999999887


Q ss_pred             ccc-cCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--h-----hHh
Q 021391          175 FAY-SEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--I-----LRG  246 (313)
Q Consensus       175 ~~~-~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~-----~~~  246 (313)
                      .+. +               +...|++||++++.++++++.|++++|  |+||+|+||+++|++.....  .     ...
T Consensus       171 ~~~~~---------------~~~~Y~asKaa~~~l~~~la~el~~~g--I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  233 (297)
T 1xhl_A          171 PQAHS---------------GYPYYACAKAALDQYTRCTAIDLIQHG--VRVNSVSPGAVATGFMGAMGLPETASDKLYS  233 (297)
T ss_dssp             SSCCT---------------TSHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCSSHHHHTTCCHHHHHHHHH
T ss_pred             cCCCC---------------CcchHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeCCCcCccccccccccccccchHH
Confidence            665 4               677899999999999999999999999  99999999999999865320  0     001


Q ss_pred             HHH----HHHHhhcCChHHHHHHHHHHHccCC-ccCCCceeecCCcccCCC
Q 021391          247 FCN----TVGKLVLKNIPQGAATTCYVALHPQ-VQGVSGEYFSDSNIYKPN  292 (313)
Q Consensus       247 ~~~----~~~~~~~~~~~eva~~~~~l~~~~~-~~~~tG~~~~~~~~~~~~  292 (313)
                      ...    ..+..+..+|+|+|+.++||++ +. +.++||+++.+||+....
T Consensus       234 ~~~~~~~~~p~~r~~~pedvA~~v~~l~s-~~~~~~itG~~i~vdGG~~~~  283 (297)
T 1xhl_A          234 FIGSRKECIPVGHCGKPEEIANIIVFLAD-RNLSSYIIGQSIVADGGSTLV  283 (297)
T ss_dssp             HHHHCTTTCTTSSCBCHHHHHHHHHHHHC-HHHHTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHHHHhC-CcccCCccCcEEEECCCcccc
Confidence            111    1234567899999999999998 66 889999999988776543

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=6.6e-43  Score=311.37  Aligned_cols=240  Identities=24%  Similarity=0.201  Sum_probs=189.7

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      .+.++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|++|+++++++++++
T Consensus        22 ~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~   96 (272)
T 4dyv_A           22 SMSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI-----GDDALCVPTDVTDPDSVRALFTAT   96 (272)
T ss_dssp             ------CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----TSCCEEEECCTTSHHHHHHHHHHH
T ss_pred             hhcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCCeEEEEecCCCHHHHHHHHHHH
Confidence            344588999999999999999999999999999999999998888777766     457899999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCC--CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccC
Q 021391          103 NSQGRPLNILINNAGIMAS--PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSE  179 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~  179 (313)
                      .+++|++|+||||||+...  +. +.+.++|++.+++|+.++++++++++|.|.+..   .++|+||++||.++..+.+ 
T Consensus        97 ~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~---~~~g~IV~isS~~~~~~~~-  172 (272)
T 4dyv_A           97 VEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQE---PRGGRIINNGSISATSPRP-  172 (272)
T ss_dssp             HHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSS---SCCEEEEEECCSSTTSCCT-
T ss_pred             HHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCC---CCCcEEEEECchhhcCCCC-
Confidence            9999999999999998643  23 788999999999999999999999999998831   1268999999999988766 


Q ss_pred             CCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc-hhHhHHHHHHHhhcCC
Q 021391          180 GIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG-ILRGFCNTVGKLVLKN  258 (313)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~  258 (313)
                                    +...|++||+|+++|+++++.|++++|  |+||+|+||+++|++..... .........+..+..+
T Consensus       173 --------------~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  236 (272)
T 4dyv_A          173 --------------YSAPYTATKHAITGLTKSTSLDGRVHD--IACGQIDIGNADTPMAQKMKAGVPQADLSIKVEPVMD  236 (272)
T ss_dssp             --------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEEECC------------------------C
T ss_pred             --------------CchHHHHHHHHHHHHHHHHHHHhCccC--EEEEEEEECcccChhhhhhcccchhhhhcccccCCCC
Confidence                          678999999999999999999999999  99999999999999876542 1112223345556789


Q ss_pred             hHHHHHHHHHHHccCCccCCCceeecCCc
Q 021391          259 IPQGAATTCYVALHPQVQGVSGEYFSDSN  287 (313)
Q Consensus       259 ~~eva~~~~~l~~~~~~~~~tG~~~~~~~  287 (313)
                      |+|+|++++||++++....+++..+...+
T Consensus       237 pedvA~~v~fL~s~~~~~~~~~i~i~~~~  265 (272)
T 4dyv_A          237 VAHVASAVVYMASLPLDANVQFMTIMATK  265 (272)
T ss_dssp             HHHHHHHHHHHHHSCTTSCCCEEEEEEC-
T ss_pred             HHHHHHHHHHHhCCCCcCccceEEEeccC
Confidence            99999999999997776666666665443

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=3.8e-43  Score=312.26  Aligned_cols=241  Identities=22%  Similarity=0.217  Sum_probs=205.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEe-cCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAV-RNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      .+++|++|||||++|||+++|++|+++|++|++++ |+.+..+...+++...  +.++.++.+|++|.++++++++++.+
T Consensus        22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~   99 (269)
T 3gk3_A           22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDA--GRDFKAYAVDVADFESCERCAEKVLA   99 (269)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTT--TCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            37899999999999999999999999999999999 5555566655555443  56799999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          105 QGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      +++++|+||||||+....  .+.+.++|++.+++|+.+++++++.++|.|.+.     +.++||++||.++..+.+    
T Consensus       100 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~----  170 (269)
T 3gk3_A          100 DFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVER-----RFGRIVNIGSVNGSRGAF----  170 (269)
T ss_dssp             HHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHHCCT----
T ss_pred             HcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCEEEEeCChhhccCCC----
Confidence            999999999999987542  277889999999999999999999999999883     468999999999988766    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhH-hHHHHHHHhhcCCh
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILR-GFCNTVGKLVLKNI  259 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~-~~~~~~~~~~~~~~  259 (313)
                                 +...|++||+|++.|+++++.|++++|  |+||+|+||+++|++.....  ... .+....+..+..+|
T Consensus       171 -----------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p  237 (269)
T 3gk3_A          171 -----------GQANYASAKAGIHGFTKTLALETAKRG--ITVNTVSPGYLATAMVEAVPQDVLEAKILPQIPVGRLGRP  237 (269)
T ss_dssp             -----------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTTTC-------CCSGGGCTTSSCBCH
T ss_pred             -----------CcchHHHHHHHHHHHHHHHHHHhhhcC--CEEEEEecCcccchhhhhhchhHHHHHhhhcCCcCCccCH
Confidence                       678999999999999999999999999  99999999999999976541  111 22334455667799


Q ss_pred             HHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          260 PQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       260 ~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      +|+|+.++||++ +.+.++||+.+.+||+...
T Consensus       238 ~dvA~~v~~L~s-~~~~~itG~~i~vdgG~~~  268 (269)
T 3gk3_A          238 DEVAALIAFLCS-DDAGFVTGADLAINGGMHM  268 (269)
T ss_dssp             HHHHHHHHHHTS-TTCTTCCSCEEEESTTSCC
T ss_pred             HHHHHHHHHHhC-CCcCCeeCcEEEECCCEeC
Confidence            999999999998 7889999999998887643

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=4.1e-43  Score=306.15  Aligned_cols=230  Identities=18%  Similarity=0.135  Sum_probs=194.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      |.+|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|++|+++++++++++.+++
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~   75 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL-----GNAVIGIVADLAHHEDVDVAFAAAVEWG   75 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----cCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence            45799999999999999999999999999999999998888877766     2368999999999999999999999999


Q ss_pred             CCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCC
Q 021391          107 RPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFD  184 (313)
Q Consensus       107 g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  184 (313)
                      |++|+||||||+.... . +.+.++|++.+++|+.++++++++++|.|.+.      +++||++||.++..+.+      
T Consensus        76 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------~~~iv~isS~~~~~~~~------  143 (235)
T 3l6e_A           76 GLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGER------GGVLANVLSSAAQVGKA------  143 (235)
T ss_dssp             CSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT------CEEEEEECCEECCSSCS------
T ss_pred             CCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc------CCEEEEEeCHHhcCCCC------
Confidence            9999999999986542 2 77899999999999999999999999999762      45999999999988766      


Q ss_pred             CCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHHHH
Q 021391          185 KINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGAA  264 (313)
Q Consensus       185 ~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~eva~  264 (313)
                               +...|++||+|+++|+++++.|++++|  ||||+|+||+++|++......       .+..+..+|+|+|+
T Consensus       144 ---------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~-------~~~~~~~~pedvA~  205 (235)
T 3l6e_A          144 ---------NESLYCASKWGMRGFLESLRAELKDSP--LRLVNLYPSGIRSEFWDNTDH-------VDPSGFMTPEDAAA  205 (235)
T ss_dssp             ---------SHHHHHHHHHHHHHHHHHHHHHTTTSS--EEEEEEEEEEECCCC------------------CBCHHHHHH
T ss_pred             ---------CCcHHHHHHHHHHHHHHHHHHHhhccC--CEEEEEeCCCccCcchhccCC-------CCCcCCCCHHHHHH
Confidence                     678999999999999999999999999  999999999999998764321       12346789999999


Q ss_pred             HHHHHHccCCccCCCceeecCCcccCC
Q 021391          265 TTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       265 ~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      .++|+++++...+++|..+.+.....+
T Consensus       206 ~v~~l~~~~~~~~i~~i~~~~~~~~~~  232 (235)
T 3l6e_A          206 YMLDALEARSSCHVTDLFIGRNEGHHH  232 (235)
T ss_dssp             HHHHHTCCCSSEEEEEEEEEECCC---
T ss_pred             HHHHHHhCCCCcceeeEEEecCCCCcc
Confidence            999999988889999998876655443

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.7e-43  Score=309.56  Aligned_cols=237  Identities=21%  Similarity=0.215  Sum_probs=193.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      +++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...  +.++.++.+|++|+++++++++++.+++
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   79 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA--GGTALAQVLDVTDRHSVAAFAQAAVDTW   79 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            47899999999999999999999999999999999999999988888765  5688999999999999999999999999


Q ss_pred             CCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCC
Q 021391          107 RPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFD  184 (313)
Q Consensus       107 g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  184 (313)
                      |++|+||||||+.... . +.+.++|++++++|+.++++++++++|.|.+.     +.|+||++||.++..+.+      
T Consensus        80 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~IV~isS~~~~~~~~------  148 (264)
T 3tfo_A           80 GRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQ-----RSGQIINIGSIGALSVVP------  148 (264)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTCCCT------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----CCeEEEEEcCHHHcccCC------
Confidence            9999999999987543 2 77899999999999999999999999999883     478999999999988766      


Q ss_pred             CCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhH-HHHHHHhhcCChHHHH
Q 021391          185 KINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGF-CNTVGKLVLKNIPQGA  263 (313)
Q Consensus       185 ~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~eva  263 (313)
                               +...|++||+|+++|+++++.|+ + |  ||||+|+||+++|++.......... ..........+|+|+|
T Consensus       149 ---------~~~~Y~asKaal~~l~~~la~e~-~-g--Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA  215 (264)
T 3tfo_A          149 ---------TAAVYCATKFAVRAISDGLRQES-T-N--IRVTCVNPGVVESELAGTITHEETMAAMDTYRAIALQPADIA  215 (264)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHC-S-S--EEEEEEEECCC-----------------------CCCHHHHH
T ss_pred             ---------CChhHHHHHHHHHHHHHHHHHhC-C-C--CEEEEEecCCCcCcccccccchhHHHHHHhhhccCCCHHHHH
Confidence                     67899999999999999999998 4 7  9999999999999987653211110 0011122357899999


Q ss_pred             HHHHHHHccCCccCCCceeecCCcccC
Q 021391          264 ATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       264 ~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      ++++||++ +...+++|+.+..++..+
T Consensus       216 ~~v~~l~s-~~~~~~~~~i~i~p~~~~  241 (264)
T 3tfo_A          216 RAVRQVIE-APQSVDTTEITIRPTASG  241 (264)
T ss_dssp             HHHHHHHH-SCTTEEEEEEEEEECC--
T ss_pred             HHHHHHhc-CCccCccceEEEecCccc
Confidence            99999998 667788888776554433

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=1.3e-42  Score=308.33  Aligned_cols=244  Identities=23%  Similarity=0.244  Sum_probs=208.9

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEE-ecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMA-VRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFAS  100 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~  100 (313)
                      ....++.+|++|||||++|||+++|++|+++|++|+++ .|+.+..++..+++...  +.++.++.+|++|+++++++++
T Consensus        19 ~~~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~   96 (267)
T 4iiu_A           19 YFQSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVAN--GGNGRLLSFDVANREQCREVLE   96 (267)
T ss_dssp             ------CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHH
T ss_pred             hhccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHH
Confidence            34446789999999999999999999999999999665 57777888888887766  5578999999999999999999


Q ss_pred             HHhhcCCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccccc
Q 021391          101 EYNSQGRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYS  178 (313)
Q Consensus       101 ~~~~~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~  178 (313)
                      ++.++++++|+||||||+.....  +.+.+++++.+++|+.+++++++.+++.|.+.    +..++||++||.++..+.+
T Consensus        97 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~----~~~g~iv~isS~~~~~~~~  172 (267)
T 4iiu_A           97 HEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGA----RQGGRIITLSSVSGVMGNR  172 (267)
T ss_dssp             HHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TSCEEEEEECCHHHHHCCT
T ss_pred             HHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc----CCCcEEEEEcchHhccCCC
Confidence            99999999999999999876533  67889999999999999999999999998743    4478999999999988776


Q ss_pred             CCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc-hhHhHHHHHHHhhcC
Q 021391          179 EGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG-ILRGFCNTVGKLVLK  257 (313)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~  257 (313)
                                     +...|++||+|++.++++++.|++++|  |+||+|+||+++|++..... .........+..+..
T Consensus       173 ---------------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~p~~~~~  235 (267)
T 4iiu_A          173 ---------------GQVNYSAAKAGIIGATKALAIELAKRK--ITVNCIAPGLIDTGMIEMEESALKEAMSMIPMKRMG  235 (267)
T ss_dssp             ---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSTTCCCCHHHHHHHHHTCTTCSCB
T ss_pred             ---------------CCchhHHHHHHHHHHHHHHHHHHhhcC--eEEEEEEEeeecCCcccccHHHHHHHHhcCCCCCCc
Confidence                           678999999999999999999999999  99999999999999987542 223334445556678


Q ss_pred             ChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          258 NIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       258 ~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      +|+|+|+.++||++ +.+.++||+.+.+||+.
T Consensus       236 ~~edva~~~~~L~s-~~~~~itG~~i~vdGG~  266 (267)
T 4iiu_A          236 QAEEVAGLASYLMS-DIAGYVTRQVISINGGM  266 (267)
T ss_dssp             CHHHHHHHHHHHHS-GGGTTCCSCEEEESTTC
T ss_pred             CHHHHHHHHHHHhC-CcccCccCCEEEeCCCc
Confidence            99999999999998 78899999999988764

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1e-43  Score=318.66  Aligned_cols=238  Identities=17%  Similarity=0.169  Sum_probs=203.3

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCch-------hHHHHHHHHHHhCCCCceEEEEccCCCHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMA-------AGKDVREAIVKEIPSAKVDAMELDVSSLASV   95 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~-------~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v   95 (313)
                      ..|+++||++|||||++|||+++|++|+++|++|++++|+.+       .+++..+++...  +.++.++++|++|++++
T Consensus         3 ~~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v   80 (285)
T 3sc4_A            3 GSMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA--GGQALPIVGDIRDGDAV   80 (285)
T ss_dssp             ---CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHH--TSEEEEEECCTTSHHHH
T ss_pred             CCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhc--CCcEEEEECCCCCHHHH
Confidence            347789999999999999999999999999999999999876       466667777665  56899999999999999


Q ss_pred             HHHHHHHhhcCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391           96 RKFASEYNSQGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus        96 ~~~~~~~~~~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                      +++++++.+++|++|+||||||+.... . +.+.++|++++++|+.++++++++++|.|.+     ++.++||++||.++
T Consensus        81 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-----~~~g~iv~isS~~~  155 (285)
T 3sc4_A           81 AAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKG-----RDNPHILTLSPPIR  155 (285)
T ss_dssp             HHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTT-----SSSCEEEECCCCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-----cCCcEEEEECChhh
Confidence            999999999999999999999987543 2 7889999999999999999999999999987     45789999999988


Q ss_pred             cccc-cCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCc-ccccCCccccchhHhHHHHH
Q 021391          174 RFAY-SEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPG-SIVTNLFRYNGILRGFCNTV  251 (313)
Q Consensus       174 ~~~~-~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG-~v~t~~~~~~~~~~~~~~~~  251 (313)
                      ..+. +               +...|++||+|++.|+++++.|++++|  ||||+|+|| +++|++.....     ....
T Consensus       156 ~~~~~~---------------~~~~Y~asKaal~~~~~~la~e~~~~g--I~vn~v~PG~~v~t~~~~~~~-----~~~~  213 (285)
T 3sc4_A          156 LEPKWL---------------RPTPYMMAKYGMTLCALGIAEELRDAG--IASNTLWPRTTVATAAVQNLL-----GGDE  213 (285)
T ss_dssp             CSGGGS---------------CSHHHHHHHHHHHHHHHHHHHHTGGGT--CEEEEEECSSCBCCHHHHHHH-----TSCC
T ss_pred             ccCCCC---------------CCchHHHHHHHHHHHHHHHHHHhcccC--cEEEEEeCCCccccHHHHhhc-----cccc
Confidence            7664 3               567899999999999999999999999  999999999 68888754220     1112


Q ss_pred             HHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          252 GKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       252 ~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      +..+..+|+|+|+.++||++ +.+ ++||+.+.++++...
T Consensus       214 ~~~r~~~pedvA~~~~~l~s-~~~-~~tG~~i~~dgg~~~  251 (285)
T 3sc4_A          214 AMARSRKPEVYADAAYVVLN-KPS-SYTGNTLLCEDVLLE  251 (285)
T ss_dssp             CCTTCBCTHHHHHHHHHHHT-SCT-TCCSCEEEHHHHHHH
T ss_pred             cccCCCCHHHHHHHHHHHhC-Ccc-cccceEEEEcCchhc
Confidence            34567899999999999998 556 999999987765443

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=1.1e-42  Score=312.27  Aligned_cols=249  Identities=21%  Similarity=0.189  Sum_probs=202.1

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc-hhHHHHHHHHHHhCCCCceEEEEccCCC----HHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM-AAGKDVREAIVKEIPSAKVDAMELDVSS----LASVR   96 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~s~----~~~v~   96 (313)
                      ...++++||++|||||++|||+++|++|+++|++|++++|+. +.++++.+++.... +.++.++.+|++|    +++++
T Consensus        16 ~~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~~~~~v~   94 (288)
T 2x9g_A           16 PRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKER-SNTAVVCQADLTNSNVLPASCE   94 (288)
T ss_dssp             ------CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSCSTTHHHHHH
T ss_pred             CCCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhc-CCceEEEEeecCCccCCHHHHH
Confidence            345568999999999999999999999999999999999998 88888877776333 4578999999999    99999


Q ss_pred             HHHHHHhhcCCCeeEEEEcccCCCCC-------Cc-----cCccchhhhhhhhhhHHHHHHHHHHHHHHHhhc-cCCCCC
Q 021391           97 KFASEYNSQGRPLNILINNAGIMASP-------FM-----LSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQ-KSSREG  163 (313)
Q Consensus        97 ~~~~~~~~~~g~id~lv~~ag~~~~~-------~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~~~~g  163 (313)
                      ++++++.+.+|++|+||||||+....       .+     .+.++|++.+++|+.+++++++.++|.|.+... .....+
T Consensus        95 ~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g  174 (288)
T 2x9g_A           95 EIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNL  174 (288)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCE
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCe
Confidence            99999999999999999999976432       23     667889999999999999999999999987310 001168


Q ss_pred             eEEEECCccccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc-
Q 021391          164 RIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG-  242 (313)
Q Consensus       164 ~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~-  242 (313)
                      +||++||.++..+.+               +...|++||+|++.|+++++.|++++|  |+||+|+||+++|++ ...+ 
T Consensus       175 ~iv~isS~~~~~~~~---------------~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~-~~~~~  236 (288)
T 2x9g_A          175 SIVNLCDAMVDQPCM---------------AFSLYNMGKHALVGLTQSAALELAPYG--IRVNGVAPGVSLLPV-AMGEE  236 (288)
T ss_dssp             EEEEECCTTTTSCCT---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSCSCCT-TSCHH
T ss_pred             EEEEEecccccCCCC---------------CCchHHHHHHHHHHHHHHHHHHhhccC--eEEEEEEeccccCcc-ccChH
Confidence            999999999887666               678999999999999999999999999  999999999999998 4211 


Q ss_pred             hhHhHHHHHHHhhc-CChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          243 ILRGFCNTVGKLVL-KNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       243 ~~~~~~~~~~~~~~-~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      ....+....+..+. .+|+|+|+.++||++ +.+.++||+++.+||+..
T Consensus       237 ~~~~~~~~~p~~r~~~~pedvA~~v~~l~s-~~~~~itG~~i~vdGG~~  284 (288)
T 2x9g_A          237 EKDKWRRKVPLGRREASAEQIADAVIFLVS-GSAQYITGSIIKVDGGLS  284 (288)
T ss_dssp             HHHHHHHTCTTTSSCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHhhCCCCCCCCCHHHHHHHHHHHhC-ccccCccCCEEEECcchh
Confidence            11222223345566 899999999999998 788999999999887754

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.9e-42  Score=305.36  Aligned_cols=231  Identities=26%  Similarity=0.294  Sum_probs=198.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcC--CEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRG--VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      ||++|||||++|||+++|++|+++|  ++|++++|+.+.++++.+++     +.++.++.+|++|+++++++++++.+++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY-----GDRFFYVVGDITEDSVLKQLVNAAVKGH   76 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH-----GGGEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh-----CCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            6999999999999999999999985  78999999988877766655     4579999999999999999999999999


Q ss_pred             CCeeEEEEcccCCCC--CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          107 RPLNILINNAGIMAS--PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       107 g~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      |++|+||||||+...  +. +.+.++|++.+++|+.++++++++++|+|.+.      +|+||++||.++..+.+     
T Consensus        77 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~------~g~iv~isS~~~~~~~~-----  145 (254)
T 3kzv_A           77 GKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKT------NGNVVFVSSDACNMYFS-----  145 (254)
T ss_dssp             SCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCSCCCCSSC-----
T ss_pred             CCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc------CCeEEEEcCchhccCCC-----
Confidence            999999999998533  22 78899999999999999999999999999873      48999999999887766     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-----------chhHhHHHHHH
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-----------GILRGFCNTVG  252 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-----------~~~~~~~~~~~  252 (313)
                                +...|++||++++.|+++++.|+  .|  ||||+|+||+++|++....           +....+....+
T Consensus       146 ----------~~~~Y~asK~a~~~~~~~la~e~--~~--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (254)
T 3kzv_A          146 ----------SWGAYGSSKAALNHFAMTLANEE--RQ--VKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKE  211 (254)
T ss_dssp             ----------CSHHHHHHHHHHHHHHHHHHHHC--TT--SEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHT
T ss_pred             ----------CcchHHHHHHHHHHHHHHHHhhc--cC--cEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHh
Confidence                      67899999999999999999998  56  9999999999999987643           12233444556


Q ss_pred             HhhcCChHHHHHHHHHHHccCC-ccCCCceeecCCcccC
Q 021391          253 KLVLKNIPQGAATTCYVALHPQ-VQGVSGEYFSDSNIYK  290 (313)
Q Consensus       253 ~~~~~~~~eva~~~~~l~~~~~-~~~~tG~~~~~~~~~~  290 (313)
                      ..+..+|+|+|++++||++ +. +.++||+++..|++..
T Consensus       212 ~~r~~~p~dva~~v~~L~s-~~~~~~itG~~i~vdg~~~  249 (254)
T 3kzv_A          212 NNQLLDSSVPATVYAKLAL-HGIPDGVNGQYLSYNDPAL  249 (254)
T ss_dssp             TC----CHHHHHHHHHHHH-HCCCGGGTTCEEETTCGGG
T ss_pred             cCCcCCcccHHHHHHHHHh-hcccCCCCccEEEecCccc
Confidence            6778899999999999998 66 5999999999887653

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=6.7e-43  Score=310.01  Aligned_cols=248  Identities=21%  Similarity=0.205  Sum_probs=211.2

Q ss_pred             hhccCCCCCCCEEEEeCCC--CchHHHHHHHHHHcCCEEEEEecCchhH-HHHHHHHHHhCCCCceEEEEccCCCHHHHH
Q 021391           20 EVTQGIDGTGLTAIVTGAS--SGIGTETARVLALRGVHVIMAVRNMAAG-KDVREAIVKEIPSAKVDAMELDVSSLASVR   96 (313)
Q Consensus        20 ~~~~~~~~~gk~~lItGas--~giG~aia~~La~~G~~V~l~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~   96 (313)
                      .+...++++||++|||||+  +|||+++|++|+++|++|++++|+.+.. ++..+++.... +.++.++++|++|+++++
T Consensus        11 ~~~~~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~   89 (267)
T 3gdg_A           11 SLLDQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTY-GIKAKAYKCQVDSYESCE   89 (267)
T ss_dssp             SHHHHHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHH-CCCEECCBCCTTCHHHHH
T ss_pred             ccccccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhc-CCceeEEecCCCCHHHHH
Confidence            3345678999999999999  9999999999999999999999887655 66777776544 467999999999999999


Q ss_pred             HHHHHHhhcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccc
Q 021391           97 KFASEYNSQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHR  174 (313)
Q Consensus        97 ~~~~~~~~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~  174 (313)
                      ++++++.++++++|+||||||+....  .+.+.++|++.+++|+.++++++++++|.|.+.     +.++||++||.++.
T Consensus        90 ~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~  164 (267)
T 3gdg_A           90 KLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKER-----GTGSLVITASMSGH  164 (267)
T ss_dssp             HHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGT
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHc-----CCceEEEEcccccc
Confidence            99999999999999999999987543  277889999999999999999999999999883     47899999999987


Q ss_pred             ccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHHHHH
Q 021391          175 FAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCNTVG  252 (313)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~  252 (313)
                      .+.+.             ++...|++||+|++.++++++.|+++.   |+||+|+||+++|++.+...  ....+....+
T Consensus       165 ~~~~~-------------~~~~~Y~~sK~a~~~~~~~la~e~~~~---i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~  228 (267)
T 3gdg_A          165 IANFP-------------QEQTSYNVAKAGCIHMARSLANEWRDF---ARVNSISPGYIDTGLSDFVPKETQQLWHSMIP  228 (267)
T ss_dssp             SCCSS-------------SCCHHHHHHHHHHHHHHHHHHHHTTTT---CEEEEEEECCEECSCGGGSCHHHHHHHHTTST
T ss_pred             ccCCC-------------CCCCcchHHHHHHHHHHHHHHHHhccC---cEEEEEECCccccchhhhCCHHHHHHHHhcCC
Confidence            65421             156789999999999999999999864   89999999999999976542  2223333445


Q ss_pred             HhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          253 KLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       253 ~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      ..+..+|+|+|++++||++ +.+.++||+.+.+||+..
T Consensus       229 ~~r~~~~~dva~~~~~l~s-~~~~~itG~~i~vdgG~~  265 (267)
T 3gdg_A          229 MGRDGLAKELKGAYVYFAS-DASTYTTGADLLIDGGYT  265 (267)
T ss_dssp             TSSCEETHHHHHHHHHHHS-TTCTTCCSCEEEESTTGG
T ss_pred             CCCCcCHHHHHhHhheeec-CccccccCCEEEECCcee
Confidence            5667789999999999998 888999999999887754

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=1.6e-42  Score=307.07  Aligned_cols=246  Identities=19%  Similarity=0.211  Sum_probs=198.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .+++.+|++|||||++|||+++|++|+++|++|++++|+.+...+...+..... +.++.++.+|++|+++++++++++.
T Consensus         2 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~   80 (264)
T 3i4f_A            2 SLGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDV-EERLQFVQADVTKKEDLHKIVEEAM   80 (264)
T ss_dssp             ----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGG-GGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CcccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc-CCceEEEEecCCCHHHHHHHHHHHH
Confidence            356678999999999999999999999999999999887655444444433322 4579999999999999999999999


Q ss_pred             hcCCCeeEEEEcccCC--CC-CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCc-cc-cccc
Q 021391          104 SQGRPLNILINNAGIM--AS-PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSE-AH-RFAY  177 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~--~~-~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~-~~-~~~~  177 (313)
                      ++++++|+||||||+.  .. +. +.+.++|++.+++|+.++++++++++|.|.++     ..++||++||. .+ ..+.
T Consensus        81 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~g~iv~iss~~~~~~~~~  155 (264)
T 3i4f_A           81 SHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQ-----NFGRIINYGFQGADSAPGW  155 (264)
T ss_dssp             HHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCTTGGGCCCC
T ss_pred             HHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-----CCCeEEEEeechhcccCCC
Confidence            9999999999999943  22 22 67889999999999999999999999999883     36899999998 33 3332


Q ss_pred             cCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHHHHHHhh
Q 021391          178 SEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCNTVGKLV  255 (313)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~  255 (313)
                      +               +...|++||+|++.++++++.|++++|  |+||+|+||+++|++.....  .........+..+
T Consensus       156 ~---------------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r  218 (264)
T 3i4f_A          156 I---------------YRSAFAAAKVGLVSLTKTVAYEEAEYG--ITANMVCPGDIIGEMKEATIQEARQLKEHNTPIGR  218 (264)
T ss_dssp             T---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCCCGGGGSCCHHHHHHC--------C
T ss_pred             C---------------CCchhHHHHHHHHHHHHHHHHHhhhcC--cEEEEEccCCccCccchhccHHHHHHHhhcCCCCC
Confidence            3               567999999999999999999999999  99999999999999877542  2222334456677


Q ss_pred             cCChHHHHHHHHHHHccCCccCCCceeecCCcccCCCc
Q 021391          256 LKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNS  293 (313)
Q Consensus       256 ~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~  293 (313)
                      ..+|+|+|+.++||++ +...++||+++.+||+.....
T Consensus       219 ~~~~~dva~~v~~l~s-~~~~~itG~~i~vdGG~~~~~  255 (264)
T 3i4f_A          219 SGTGEDIARTISFLCE-DDSDMITGTIIEVTGAVDVIH  255 (264)
T ss_dssp             CCCHHHHHHHHHHHHS-GGGTTCCSCEEEESCSCCCCC
T ss_pred             CcCHHHHHHHHHHHcC-cccCCCCCcEEEEcCceeecc
Confidence            8899999999999998 778899999999887766544

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.9e-43  Score=314.29  Aligned_cols=245  Identities=22%  Similarity=0.227  Sum_probs=199.1

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      ..++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.... +..+.++++|++|+++++++++++
T Consensus        27 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~  105 (281)
T 4dry_A           27 GKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT-GNIVRAVVCDVGDPDQVAALFAAV  105 (281)
T ss_dssp             -------CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CCeEEEEEcCCCCHHHHHHHHHHH
Confidence            3457899999999999999999999999999999999999999998888887653 334589999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCC--CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccC
Q 021391          103 NSQGRPLNILINNAGIMAS--PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSE  179 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~  179 (313)
                      .+++|++|+||||||+...  +. +.+.++|++.+++|+.++++++++++|.|.++.   ..+|+||++||.++..+.+ 
T Consensus       106 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~---~~~g~IV~isS~~~~~~~~-  181 (281)
T 4dry_A          106 RAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQT---PRGGRIINNGSISAQTPRP-  181 (281)
T ss_dssp             HHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSS---SCCEEEEEECCGGGTCCCT-
T ss_pred             HHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---CCCcEEEEECCHHhCCCCC-
Confidence            9999999999999998643  23 788999999999999999999999999998831   1268999999999988766 


Q ss_pred             CCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccch-hHhHHHHHHHhhcCC
Q 021391          180 GIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI-LRGFCNTVGKLVLKN  258 (313)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~  258 (313)
                                    +...|++||+|+++|+++++.|++++|  |+||+|+||+++|++...... ........+..+..+
T Consensus       182 --------------~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  245 (281)
T 4dry_A          182 --------------NSAPYTATKHAITGLTKSTALDGRMHD--IACGQIDIGNAATDMTARMSTGVLQANGEVAAEPTIP  245 (281)
T ss_dssp             --------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEECBCC-------CEEECTTSCEEECCCBC
T ss_pred             --------------CChhHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEECcCcChhhhhhcchhhhhhhcccccCCCC
Confidence                          678999999999999999999999999  999999999999998764310 001111223445679


Q ss_pred             hHHHHHHHHHHHccCCccCCCceeecCCcc
Q 021391          259 IPQGAATTCYVALHPQVQGVSGEYFSDSNI  288 (313)
Q Consensus       259 ~~eva~~~~~l~~~~~~~~~tG~~~~~~~~  288 (313)
                      |+|+|++++||++++....+++..+...+.
T Consensus       246 pedvA~~v~fL~s~~~~~~i~~~~i~p~~~  275 (281)
T 4dry_A          246 IEHIAEAVVYMASLPLSANVLTMTVMATRM  275 (281)
T ss_dssp             HHHHHHHHHHHHHSCTTEEEEEEEEEETTS
T ss_pred             HHHHHHHHHHHhCCCccCccccEEEEeccc
Confidence            999999999999988887888877765543

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=2.4e-42  Score=308.94  Aligned_cols=246  Identities=17%  Similarity=0.150  Sum_probs=208.7

Q ss_pred             hhccCCCCCCCEEEEeCCC--CchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHH
Q 021391           20 EVTQGIDGTGLTAIVTGAS--SGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRK   97 (313)
Q Consensus        20 ~~~~~~~~~gk~~lItGas--~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~   97 (313)
                      ....+.+++||++|||||+  +|||+++|++|+++|++|++++|+.  .++..+++....  .++.++.+|++|.+++++
T Consensus        17 ~~~~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~   92 (280)
T 3nrc_A           17 RGSHMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEF--NPAAVLPCDVISDQEIKD   92 (280)
T ss_dssp             -----CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGG--CCSEEEECCTTCHHHHHH
T ss_pred             CCCcccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhc--CCceEEEeecCCHHHHHH
Confidence            3334456899999999998  7899999999999999999999987  445556666554  358899999999999999


Q ss_pred             HHHHHhhcCCCeeEEEEcccCCCC-----CC-c-cCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECC
Q 021391           98 FASEYNSQGRPLNILINNAGIMAS-----PF-M-LSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSS  170 (313)
Q Consensus        98 ~~~~~~~~~g~id~lv~~ag~~~~-----~~-~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS  170 (313)
                      +++++.+.++++|+||||||+...     +. + .+.+++++.+++|+.++++++++++|.|.+     + +++||++||
T Consensus        93 ~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-----~-~g~iv~isS  166 (280)
T 3nrc_A           93 LFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKN-----R-NASMVALTY  166 (280)
T ss_dssp             HHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT-----T-TCEEEEEEC
T ss_pred             HHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----C-CCeEEEEec
Confidence            999999999999999999998753     12 3 788999999999999999999999999976     2 689999999


Q ss_pred             ccccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----hhHh
Q 021391          171 EAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----ILRG  246 (313)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----~~~~  246 (313)
                      .++..+.+               +...|++||+|++.|+++++.|++++|  |+||+|+||+++|++.....    ....
T Consensus       167 ~~~~~~~~---------------~~~~Y~asKaal~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~  229 (280)
T 3nrc_A          167 IGAEKAMP---------------SYNTMGVAKASLEATVRYTALALGEDG--IKVNAVSAGPIKTLAASGISNFKKMLDY  229 (280)
T ss_dssp             GGGTSCCT---------------TTHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCCCCSGGGGCTTHHHHHHH
T ss_pred             cccccCCC---------------CchhhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEeeccccchhhhcCcchHHHHHH
Confidence            99988766               678999999999999999999999999  99999999999999977643    2223


Q ss_pred             HHHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCCc
Q 021391          247 FCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNS  293 (313)
Q Consensus       247 ~~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~  293 (313)
                      +....+..+..+|+|+|+.++||++ +.+.++||+.|.+||+.....
T Consensus       230 ~~~~~p~~~~~~pedvA~~v~~l~s-~~~~~~tG~~i~vdgG~~~~~  275 (280)
T 3nrc_A          230 NAMVSPLKKNVDIMEVGNTVAFLCS-DMATGITGEVVHVDAGYHCVS  275 (280)
T ss_dssp             HHHHSTTCSCCCHHHHHHHHHHTTS-GGGTTCCSCEEEESTTGGGCC
T ss_pred             HHhcCCCCCCCCHHHHHHHHHHHhC-cccCCcCCcEEEECCCccccC
Confidence            3344455677899999999999998 788999999999887765543

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=3.1e-43  Score=310.72  Aligned_cols=240  Identities=20%  Similarity=0.172  Sum_probs=191.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .|+++||++|||||++|||+++|++|+++|++|++++|+.++..   +++     +.++.++++|++|+++++++++.+.
T Consensus         4 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~   75 (257)
T 3tl3_A            4 SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVV---ADL-----GDRARFAAADVTDEAAVASALDLAE   75 (257)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHH---HHT-----CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHH---Hhc-----CCceEEEECCCCCHHHHHHHHHHHH
Confidence            57789999999999999999999999999999999999654322   222     4579999999999999999999887


Q ss_pred             hcCCCeeEEEEcccCCCCC------CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhcc---CCCCCeEEEECCcccc
Q 021391          104 SQGRPLNILINNAGIMASP------FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQK---SSREGRIVNVSSEAHR  174 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~---~~~~g~iv~isS~~~~  174 (313)
                      + +|++|+||||||+....      .+.+.++|++.+++|+.++++++++++|.|.+....   .+..|+||++||.++.
T Consensus        76 ~-~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  154 (257)
T 3tl3_A           76 T-MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAF  154 (257)
T ss_dssp             H-HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--
T ss_pred             H-hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhc
Confidence            7 89999999999986431      137889999999999999999999999999873111   1246899999999998


Q ss_pred             ccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHHHHH
Q 021391          175 FAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCNTVG  252 (313)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~  252 (313)
                      .+.+               +...|++||+|++.|+++++.|++++|  |+||+|+||+++|++.....  ....+....+
T Consensus       155 ~~~~---------------~~~~Y~asKaa~~~~~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  217 (257)
T 3tl3_A          155 DGQI---------------GQAAYSASKGGVVGMTLPIARDLASHR--IRVMTIAPGLFDTPLLASLPEEARASLGKQVP  217 (257)
T ss_dssp             CCHH---------------HHHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTC---CHHHHHHHHHTSS
T ss_pred             CCCC---------------CCccHHHHHHHHHHHHHHHHHHhcccC--cEEEEEEecCccChhhhhccHHHHHHHHhcCC
Confidence            8776               678999999999999999999999999  99999999999999987542  2222333334


Q ss_pred             H-hhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCC
Q 021391          253 K-LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPN  292 (313)
Q Consensus       253 ~-~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~  292 (313)
                      . .+..+|+|+|+.++||++ +  .++||+.+.+||+....
T Consensus       218 ~~~r~~~p~dva~~v~~l~s-~--~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          218 HPSRLGNPDEYGALAVHIIE-N--PMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             SSCSCBCHHHHHHHHHHHHH-C--TTCCSCEEEESTTC---
T ss_pred             CCCCccCHHHHHHHHHHHhc-C--CCCCCCEEEECCCccCC
Confidence            4 667899999999999998 4  79999999998876543

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-42  Score=308.63  Aligned_cols=246  Identities=15%  Similarity=0.122  Sum_probs=204.6

Q ss_pred             hhccCCCCCCCEEEEeCCC--CchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHH
Q 021391           20 EVTQGIDGTGLTAIVTGAS--SGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRK   97 (313)
Q Consensus        20 ~~~~~~~~~gk~~lItGas--~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~   97 (313)
                      .+....++++|++|||||+  +|||+++|++|+++|++|++++|+.. ..+..+++....  .++.++.+|++|++++++
T Consensus         5 ~~~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~   81 (271)
T 3ek2_A            5 HHHHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDR-FKDRITEFAAEF--GSELVFPCDVADDAQIDA   81 (271)
T ss_dssp             ----CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHT--TCCCEEECCTTCHHHHHH
T ss_pred             CCCCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchh-hHHHHHHHHHHc--CCcEEEECCCCCHHHHHH
Confidence            3445667899999999999  99999999999999999999999854 344555665554  358899999999999999


Q ss_pred             HHHHHhhcCCCeeEEEEcccCCCC-----C-Cc-cCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECC
Q 021391           98 FASEYNSQGRPLNILINNAGIMAS-----P-FM-LSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSS  170 (313)
Q Consensus        98 ~~~~~~~~~g~id~lv~~ag~~~~-----~-~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS  170 (313)
                      +++++.++++++|+||||||+...     + .+ .+.+++++.+++|+.++++++++++|.|.+       +++||++||
T Consensus        82 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~g~iv~isS  154 (271)
T 3ek2_A           82 LFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD-------DASLLTLSY  154 (271)
T ss_dssp             HHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE-------EEEEEEEEC
T ss_pred             HHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc-------CceEEEEec
Confidence            999999999999999999998753     2 24 788999999999999999999999999865       689999999


Q ss_pred             ccccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccch----hHh
Q 021391          171 EAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI----LRG  246 (313)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~----~~~  246 (313)
                      .++..+.+               +...|++||+|++.|+++++.|++++|  |+||+|+||+++|++......    ...
T Consensus       155 ~~~~~~~~---------------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~  217 (271)
T 3ek2_A          155 LGAERAIP---------------NYNTMGLAKAALEASVRYLAVSLGAKG--VRVNAISAGPIKTLAASGIKSFGKILDF  217 (271)
T ss_dssp             GGGTSBCT---------------TTTHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCC-----CCCHHHHHHHHH
T ss_pred             cccccCCC---------------CccchhHHHHHHHHHHHHHHHHHHhcC--cEEEEEecCcccchhhhcccchHHHHHH
Confidence            99988776               678999999999999999999999999  999999999999999776432    223


Q ss_pred             HHHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCCc
Q 021391          247 FCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNS  293 (313)
Q Consensus       247 ~~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~  293 (313)
                      +....+..+..+|+|+|+.++||++ +.+.++||++|.+||+....-
T Consensus       218 ~~~~~~~~~~~~pedva~~i~~l~s-~~~~~~tG~~i~vdgG~~~~~  263 (271)
T 3ek2_A          218 VESNSPLKRNVTIEQVGNAGAFLLS-DLASGVTAEVMHVDSGFNAVV  263 (271)
T ss_dssp             HHHHSTTSSCCCHHHHHHHHHHHHS-GGGTTCCSEEEEESTTGGGBC
T ss_pred             HHhcCCcCCCCCHHHHHHHHHHHcC-cccCCeeeeEEEECCCeeeeh
Confidence            3344555677899999999999998 788999999999887765543

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=1.1e-42  Score=317.07  Aligned_cols=249  Identities=20%  Similarity=0.186  Sum_probs=207.7

Q ss_pred             hccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecC----------chhHHHHHHHHHHhCCCCceEEEEccCC
Q 021391           21 VTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRN----------MAAGKDVREAIVKEIPSAKVDAMELDVS   90 (313)
Q Consensus        21 ~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~----------~~~~~~~~~~l~~~~~~~~~~~~~~D~s   90 (313)
                      +.++.+++||++|||||++|||+++|++|+++|++|++++|+          .+..++..+++...  +.++.++.+|++
T Consensus        19 p~~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~   96 (322)
T 3qlj_A           19 PGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA--GGEAVADGSNVA   96 (322)
T ss_dssp             ---CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHT--TCEEEEECCCTT
T ss_pred             CchhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhc--CCcEEEEECCCC
Confidence            334556899999999999999999999999999999999998          67778888887765  568999999999


Q ss_pred             CHHHHHHHHHHHhhcCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhcc-CCCCCeEEE
Q 021391           91 SLASVRKFASEYNSQGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQK-SSREGRIVN  167 (313)
Q Consensus        91 ~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-~~~~g~iv~  167 (313)
                      |+++++++++++.+++|++|+||||||+.... . +.+.++|++.+++|+.+++++++++.|+|.+.... ...+|+||+
T Consensus        97 d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~  176 (322)
T 3qlj_A           97 DWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIIN  176 (322)
T ss_dssp             SHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEE
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEE
Confidence            99999999999999999999999999987653 2 78899999999999999999999999999874311 122479999


Q ss_pred             ECCccccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhH
Q 021391          168 VSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGF  247 (313)
Q Consensus       168 isS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~  247 (313)
                      +||.++..+.+               +...|++||+|++.|+++++.|++++|  |+||+|+|| +.|++..... ....
T Consensus       177 isS~~~~~~~~---------------~~~~Y~asKaal~~l~~~la~e~~~~g--I~vn~v~PG-~~t~~~~~~~-~~~~  237 (322)
T 3qlj_A          177 TSSGAGLQGSV---------------GQGNYSAAKAGIATLTLVGAAEMGRYG--VTVNAIAPS-ARTRMTETVF-AEMM  237 (322)
T ss_dssp             ECCHHHHHCBT---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEC-TTSCCSCCSC-CC--
T ss_pred             EcCHHHccCCC---------------CCccHHHHHHHHHHHHHHHHHHhcccC--cEEEEecCC-CCCccchhhh-hhhh
Confidence            99999988766               678999999999999999999999999  999999999 9999876531 1111


Q ss_pred             HHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          248 CNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       248 ~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      ..........+|+|+|++++||++ +.+.++||+++.+||+...
T Consensus       238 ~~~~~~~~~~~pedva~~v~~L~s-~~~~~itG~~i~vdGG~~~  280 (322)
T 3qlj_A          238 ATQDQDFDAMAPENVSPLVVWLGS-AEARDVTGKVFEVEGGKIR  280 (322)
T ss_dssp             ------CCTTCGGGTHHHHHHHTS-GGGGGCCSCEEEEETTEEE
T ss_pred             hccccccCCCCHHHHHHHHHHHhC-ccccCCCCCEEEECCCccc
Confidence            112222345689999999999998 8889999999998776543

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-42  Score=315.87  Aligned_cols=246  Identities=17%  Similarity=0.182  Sum_probs=205.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEe-cCchhHHHHHHHHHHhCCCCceEEEEccCCCHH-----------
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAV-RNMAAGKDVREAIVKEIPSAKVDAMELDVSSLA-----------   93 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~-----------   93 (313)
                      +++||++|||||++|||+++|++|+++|++|++++ |+.+.++++.+++.... +.++.++.+|++|++           
T Consensus        43 ~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~  121 (328)
T 2qhx_A           43 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR-PNSAITVQADLSNVATAPVSGADGSA  121 (328)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSCBCC-------C
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc-CCeEEEEEeeCCCchhcccccccccc
Confidence            38999999999999999999999999999999999 99988888888876333 457899999999999           


Q ss_pred             ------HHHHHHHHHhhcCCCeeEEEEcccCCCC-CC-ccC--------------ccchhhhhhhhhhHHHHHHHHHHHH
Q 021391           94 ------SVRKFASEYNSQGRPLNILINNAGIMAS-PF-MLS--------------KDNIELQFATNHLGHFLLTHLLLDT  151 (313)
Q Consensus        94 ------~v~~~~~~~~~~~g~id~lv~~ag~~~~-~~-~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~~  151 (313)
                            +++++++++.+++|++|+||||||+... +. +.+              .++|++.+++|+.++++++++++|.
T Consensus       122 ~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  201 (328)
T 2qhx_A          122 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR  201 (328)
T ss_dssp             CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             ccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                  9999999999999999999999998653 22 556              7899999999999999999999999


Q ss_pred             HHHhhc-cCCCCCeEEEECCccccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeC
Q 021391          152 MKKTAQ-KSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHP  230 (313)
Q Consensus       152 l~~~~~-~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~P  230 (313)
                      |.+... .....++||++||.++..+.+               +...|++||++++.|+++++.|++++|  |+||+|+|
T Consensus       202 m~~~~~~~~~~~g~IV~isS~~~~~~~~---------------~~~~Y~asKaal~~l~~~la~el~~~g--Irvn~v~P  264 (328)
T 2qhx_A          202 VAGTPAKHRGTNYSIINMVDAMTNQPLL---------------GYTIYTMAKGALEGLTRSAALELAPLQ--IRVNGVGP  264 (328)
T ss_dssp             HHHSCGGGSCSCEEEEEECCTTTTSCCT---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEE
T ss_pred             HHhcCCcCCCCCcEEEEECchhhccCCC---------------CcHHHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEec
Confidence            987210 001168999999999887766               678999999999999999999999999  99999999


Q ss_pred             cccccCCccccc-hhHhHHHHHHHh-hcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          231 GSIVTNLFRYNG-ILRGFCNTVGKL-VLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       231 G~v~t~~~~~~~-~~~~~~~~~~~~-~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      |+++|++ ...+ ....+....+.. +..+|+|+|++++||++ +.+.++||+++.+||+...
T Consensus       265 G~v~T~~-~~~~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s-~~~~~itG~~i~vdGG~~~  325 (328)
T 2qhx_A          265 GLSVLVD-DMPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCS-SKAKYITGTCVKVDGGYSL  325 (328)
T ss_dssp             SSBSCCC-CSCHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             CcccCCc-cccHHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhC-ccccCccCcEEEECCCccc
Confidence            9999998 4321 112222223444 67899999999999998 7889999999998877543

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=1.7e-42  Score=310.34  Aligned_cols=242  Identities=22%  Similarity=0.270  Sum_probs=203.3

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchh-HHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAA-GKDVREAIVKEIPSAKVDAMELDVSSLASVRKFAS  100 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~  100 (313)
                      ...++++||++|||||++|||+++|++|+++|++|++++|+.+. .+...+++...  +.++.++.+|++|.++++++++
T Consensus        22 ~~~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~   99 (283)
T 1g0o_A           22 PQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN--GSDAACVKANVGVVEDIVRMFE   99 (283)
T ss_dssp             GGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHH
T ss_pred             CcccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHh--CCCeEEEEcCCCCHHHHHHHHH
Confidence            45677899999999999999999999999999999999998754 45555556544  4578999999999999999999


Q ss_pred             HHhhcCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccccc
Q 021391          101 EYNSQGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYS  178 (313)
Q Consensus       101 ~~~~~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~  178 (313)
                      ++.+.++++|+||||||+.... . +.+.++|++.+++|+.+++++++++.|.|.+       .++||++||.++..+.+
T Consensus       100 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~~~  172 (283)
T 1g0o_A          100 EAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI-------GGRLILMGSITGQAKAV  172 (283)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT-------TCEEEEECCGGGTCSSC
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc-------CCeEEEEechhhccCCC
Confidence            9999999999999999986542 2 6788999999999999999999999999832       68999999998876543


Q ss_pred             CCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-------------chhH
Q 021391          179 EGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-------------GILR  245 (313)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-------------~~~~  245 (313)
                      .              ....|++||++++.++++++.|++++|  |+||+|+||+++|++....             ....
T Consensus       173 ~--------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  236 (283)
T 1g0o_A          173 P--------------KHAVYSGSKGAIETFARCMAIDMADKK--ITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVD  236 (283)
T ss_dssp             S--------------SCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHH
T ss_pred             C--------------CCcchHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCcccchhhhhhhhhccccccccCHHHHH
Confidence            1              367899999999999999999999999  9999999999999875431             0111


Q ss_pred             hHHH--HHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          246 GFCN--TVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       246 ~~~~--~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      .+..  ..+..+..+|+|+|+.++||++ +.+.++||+++.+||+.
T Consensus       237 ~~~~~~~~p~~r~~~p~dvA~~v~~l~s-~~~~~itG~~i~vdgG~  281 (283)
T 1g0o_A          237 EYAAVQWSPLRRVGLPIDIARVVCFLAS-NDGGWVTGKVIGIDGGA  281 (283)
T ss_dssp             HHHHHHSCTTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTC
T ss_pred             HHHhhcCCCCCCCcCHHHHHHHHHHHhC-ccccCcCCCEEEeCCCc
Confidence            1222  2344567799999999999998 77889999999988764

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=7e-43  Score=308.06  Aligned_cols=238  Identities=24%  Similarity=0.232  Sum_probs=202.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++.+|++|+++++++++++.++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVTIEEDWQRVVAYAREE   76 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEecCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999987777665544     346889999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCC-CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          106 GRPLNILINNAGIMAS-PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~-~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      +|++|+||||||+... +. +.+.++|++.+++|+.+++++++.++|.|.++     +.++||++||.++..+.+     
T Consensus        77 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~-----  146 (254)
T 1hdc_A           77 FGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA-----GGGSIVNISSAAGLMGLA-----  146 (254)
T ss_dssp             HSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCT-----
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCCEEEEECchhhccCCC-----
Confidence            9999999999998654 22 67889999999999999999999999999873     368999999999887766     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--chhHhHHHHHHHhhcC-ChH
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--GILRGFCNTVGKLVLK-NIP  260 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~-~~~  260 (313)
                                +...|++||++++.++++++.|++++|  |+||+|+||+++|++....  .....+....+..+.. +|+
T Consensus       147 ----------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~~  214 (254)
T 1hdc_A          147 ----------LTSSYGASKWGVRGLSKLAAVELGTDR--IRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPG  214 (254)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSSCB-CHH
T ss_pred             ----------CchhHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecccCcCccccccchhHHHHHHhcCCCCCCCCCHH
Confidence                      678999999999999999999999999  9999999999999875431  1111111122344566 999


Q ss_pred             HHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          261 QGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       261 eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      |+|+.++||++ +.+.++||+++.++|+...
T Consensus       215 dvA~~v~~l~s-~~~~~~tG~~~~vdgG~~~  244 (254)
T 1hdc_A          215 EIAGAVVKLLS-DTSSYVTGAELAVDGGWTT  244 (254)
T ss_dssp             HHHHHHHHHHS-GGGTTCCSCEEEESTTTTT
T ss_pred             HHHHHHHHHhC-chhcCCCCCEEEECCCccc
Confidence            99999999998 7788999999998877544

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=5.4e-42  Score=303.68  Aligned_cols=235  Identities=23%  Similarity=0.262  Sum_probs=196.5

Q ss_pred             hccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHH
Q 021391           21 VTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFAS  100 (313)
Q Consensus        21 ~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~  100 (313)
                      ..++.+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|+++++++++
T Consensus        21 ~~~m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~   98 (262)
T 3rkr_A           21 DKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA--GGEAESHACDLSHSDAIAAFAT   98 (262)
T ss_dssp             ----CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHH
T ss_pred             cchhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh--CCceeEEEecCCCHHHHHHHHH
Confidence            33445689999999999999999999999999999999999999999888888765  5689999999999999999999


Q ss_pred             HHhhcCCCeeEEEEcccCCCC--CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccc
Q 021391          101 EYNSQGRPLNILINNAGIMAS--PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAY  177 (313)
Q Consensus       101 ~~~~~~g~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~  177 (313)
                      ++.+.+|++|+||||||+...  +. +.+.++|++.+++|+.++++++++++|.|.+     ++.|+||++||.++..+.
T Consensus        99 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-----~~~g~iv~isS~~~~~~~  173 (262)
T 3rkr_A           99 GVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIA-----AKRGHIINISSLAGKNPV  173 (262)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-----TTCCEEEEECSSCSSCCC
T ss_pred             HHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-----CCCceEEEEechhhcCCC
Confidence            999999999999999998432  22 7788999999999999999999999999988     457899999999988776


Q ss_pred             cCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcC
Q 021391          178 SEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLK  257 (313)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  257 (313)
                      +               +...|++||++++.++++++.|+++.|  |+||+|+||+++|++.....      ...+..+..
T Consensus       174 ~---------------~~~~Y~asKaa~~~l~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~------~~~~~~~~~  230 (262)
T 3rkr_A          174 A---------------DGAAYTASKWGLNGLMTSAAEELRQHQ--VRVSLVAPGSVRTEFGVGLS------AKKSALGAI  230 (262)
T ss_dssp             T---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCC----------------------CC
T ss_pred             C---------------CCchHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCCCcCCcccccc------cccccccCC
Confidence            6               678999999999999999999999999  99999999999999865432      122345567


Q ss_pred             ChHHHHHHHHHHHccCCccCCCceeecCC
Q 021391          258 NIPQGAATTCYVALHPQVQGVSGEYFSDS  286 (313)
Q Consensus       258 ~~~eva~~~~~l~~~~~~~~~tG~~~~~~  286 (313)
                      +|+|+|+.++||++ +...+++|+++...
T Consensus       231 ~p~dvA~~v~~l~s-~~~~~~~g~~~i~p  258 (262)
T 3rkr_A          231 EPDDIADVVALLAT-QADQSFISEVLVRP  258 (262)
T ss_dssp             CHHHHHHHHHHHHT-CCTTCCEEEEEEEC
T ss_pred             CHHHHHHHHHHHhc-CccccccCcEEecc
Confidence            99999999999998 67788899877644

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-42  Score=311.00  Aligned_cols=243  Identities=22%  Similarity=0.186  Sum_probs=205.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCC-CCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIP-SAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++..... ..++.++.+|++|+++++++++++.+
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   82 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999888888777765421 11789999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCC-C----C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccc-
Q 021391          105 QGRPLNILINNAGIMAS-P----F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAY-  177 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~-~----~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~-  177 (313)
                      ++|++|+||||||+... +    . +.+.++|++.+++|+.+++++++++.|.|.+.      +++||++||.++..+. 
T Consensus        83 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~~  156 (280)
T 1xkq_A           83 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS------KGEIVNVSSIVAGPQAQ  156 (280)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCGGGSSSCC
T ss_pred             hcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcC------CCcEEEecCccccCCCC
Confidence            99999999999997643 2    2 66788999999999999999999999999873      3899999999887665 


Q ss_pred             cCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--h-----hHhHHH-
Q 021391          178 SEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--I-----LRGFCN-  249 (313)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~-----~~~~~~-  249 (313)
                      +               +...|++||++++.++++++.|++++|  |+||+|+||+++|++.....  .     ...... 
T Consensus       157 ~---------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  219 (280)
T 1xkq_A          157 P---------------DFLYYAIAKAALDQYTRSTAIDLAKFG--IRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMAS  219 (280)
T ss_dssp             C---------------SSHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHH
T ss_pred             C---------------cccHHHHHHHHHHHHHHHHHHHhccCC--eEEEEEeeCcCcCCcccccccccccccchHHHHHH
Confidence            4               567899999999999999999999999  99999999999999865320  0     001111 


Q ss_pred             ---HHHHhhcCChHHHHHHHHHHHccCC-ccCCCceeecCCcccCCC
Q 021391          250 ---TVGKLVLKNIPQGAATTCYVALHPQ-VQGVSGEYFSDSNIYKPN  292 (313)
Q Consensus       250 ---~~~~~~~~~~~eva~~~~~l~~~~~-~~~~tG~~~~~~~~~~~~  292 (313)
                         ..+..+..+|+|+|+.++||++ +. +.++||+.+.+||+....
T Consensus       220 ~~~~~p~~~~~~pedvA~~v~~l~s-~~~~~~~tG~~i~vdgG~~~~  265 (280)
T 1xkq_A          220 HKECIPIGAAGKPEHIANIILFLAD-RNLSFYILGQSIVADGGTSLV  265 (280)
T ss_dssp             CTTTCTTSSCBCHHHHHHHHHHHHC-HHHHTTCCSCEEEESTTGGGC
T ss_pred             HHcCCCCCCCCCHHHHHHHHHHhcC-cccccCccCCeEEECCCcccc
Confidence               1234567899999999999998 66 889999999988775544

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=2.4e-42  Score=305.98  Aligned_cols=241  Identities=23%  Similarity=0.270  Sum_probs=203.5

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      ...++++||++|||||++|||+++|++|+++|++|++++|+.+..++..+++     ..++.++.+|++|++++++++++
T Consensus         5 ~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~d~~~v~~~~~~   79 (263)
T 3ak4_A            5 AGIFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGL-----ENGGFAVEVDVTKRASVDAAMQK   79 (263)
T ss_dssp             -CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-----TTCCEEEECCTTCHHHHHHHHHH
T ss_pred             ccCcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-----hcCCeEEEEeCCCHHHHHHHHHH
Confidence            3456789999999999999999999999999999999999987766554433     22678899999999999999999


Q ss_pred             HhhcCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCC-CCeEEEECCcccccccc
Q 021391          102 YNSQGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSR-EGRIVNVSSEAHRFAYS  178 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~-~g~iv~isS~~~~~~~~  178 (313)
                      +.+++|++|+||||||+.... . +.+.++|++.+++|+.+++++++++.|.|.+     +. .++||++||..+..+.+
T Consensus        80 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~-----~~~~g~iv~isS~~~~~~~~  154 (263)
T 3ak4_A           80 AIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLA-----SNTKGVIVNTASLAAKVGAP  154 (263)
T ss_dssp             HHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-----TTCCCEEEEECCGGGTSCCT
T ss_pred             HHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-----cCCCeEEEEecccccccCCC
Confidence            999999999999999986542 2 6788999999999999999999999999987     33 58999999999887665


Q ss_pred             CCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc-------------hhH
Q 021391          179 EGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG-------------ILR  245 (313)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~-------------~~~  245 (313)
                                     +...|++||++++.++++++.|++++|  |+||+|+||+++|++.....             ...
T Consensus       155 ---------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  217 (263)
T 3ak4_A          155 ---------------LLAHYSASKFAVFGWTQALAREMAPKN--IRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRA  217 (263)
T ss_dssp             ---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred             ---------------CchhHHHHHHHHHHHHHHHHHHHhHcC--eEEEEEecccccChhhhhhccccccccccCcHHHHH
Confidence                           677899999999999999999999999  99999999999999754321             011


Q ss_pred             hHHHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          246 GFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       246 ~~~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      .+....+..+..+|+|+|+.++||++ +.+.++||+.+.++|+..
T Consensus       218 ~~~~~~p~~~~~~~~dvA~~v~~l~s-~~~~~~tG~~~~vdgG~~  261 (263)
T 3ak4_A          218 EYVSLTPLGRIEEPEDVADVVVFLAS-DAARFMTGQGINVTGGVR  261 (263)
T ss_dssp             HHHHTCTTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESSSSS
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHhC-ccccCCCCCEEEECcCEe
Confidence            11122244557899999999999998 778899999999887653

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=3.1e-42  Score=302.15  Aligned_cols=233  Identities=26%  Similarity=0.330  Sum_probs=202.2

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccC--CCHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDV--SSLASVRKFAS  100 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~--s~~~~v~~~~~  100 (313)
                      ...+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.... ..+..++.+|+  ++.++++++++
T Consensus         8 ~~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~d~d~~~~~~~~~~~~   86 (247)
T 3i1j_A            8 HPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG-QPQPLIIALNLENATAQQYRELAA   86 (247)
T ss_dssp             CTTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-SCCCEEEECCTTTCCHHHHHHHHH
T ss_pred             CCccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC-CCCceEEEeccccCCHHHHHHHHH
Confidence            4456899999999999999999999999999999999999999999888887653 24566777776  99999999999


Q ss_pred             HHhhcCCCeeEEEEcccCCCC--CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccc
Q 021391          101 EYNSQGRPLNILINNAGIMAS--PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAY  177 (313)
Q Consensus       101 ~~~~~~g~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~  177 (313)
                      ++.+.+|++|+||||||+...  +. +.+.++|++.+++|+.++++++++++|+|.+     ++.++||++||..+..+.
T Consensus        87 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-----~~~~~iv~isS~~~~~~~  161 (247)
T 3i1j_A           87 RVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKR-----SEDASIAFTSSSVGRKGR  161 (247)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTT-----SSSEEEEEECCGGGTSCC
T ss_pred             HHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-----CCCCeEEEEcchhhcCCC
Confidence            999999999999999998533  23 6788999999999999999999999999987     457899999999998876


Q ss_pred             cCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhcc-CCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhc
Q 021391          178 SEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKE-DGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVL  256 (313)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~-~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~  256 (313)
                      +               +...|++||+|++.|+++++.|+.+ .|  ||||+|+||+++|++.....      ......+.
T Consensus       162 ~---------------~~~~Y~~sK~a~~~~~~~la~e~~~~~~--i~v~~v~PG~v~t~~~~~~~------~~~~~~~~  218 (247)
T 3i1j_A          162 A---------------NWGAYGVSKFATEGLMQTLADELEGVTA--VRANSINPGATRTGMRAQAY------PDENPLNN  218 (247)
T ss_dssp             T---------------TCHHHHHHHHHHHHHHHHHHHHHTTTSS--EEEEEEECCCCSSHHHHHHS------TTSCGGGS
T ss_pred             C---------------CcchhHHHHHHHHHHHHHHHHHhcCCCC--eEEEEEecCcccCccchhcc------cccCccCC
Confidence            6               6789999999999999999999976 78  99999999999998754321      01122346


Q ss_pred             CChHHHHHHHHHHHccCCccCCCceeecC
Q 021391          257 KNIPQGAATTCYVALHPQVQGVSGEYFSD  285 (313)
Q Consensus       257 ~~~~eva~~~~~l~~~~~~~~~tG~~~~~  285 (313)
                      .+|+|+|+.++||++ +.+.++||+.|..
T Consensus       219 ~~p~dva~~~~~l~s-~~~~~itG~~i~~  246 (247)
T 3i1j_A          219 PAPEDIMPVYLYLMG-PDSTGINGQALNA  246 (247)
T ss_dssp             CCGGGGTHHHHHHHS-GGGTTCCSCEEEC
T ss_pred             CCHHHHHHHHHHHhC-chhccccCeeecC
Confidence            789999999999998 8899999999874

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.4e-42  Score=307.26  Aligned_cols=236  Identities=18%  Similarity=0.242  Sum_probs=201.6

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      .+.|++++|++|||||++|||+++|++|+++|++|++++|+.+..+           ..++.++.+|++|++++++++++
T Consensus        21 ~~m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dv~d~~~v~~~~~~   89 (260)
T 3un1_A           21 QSMMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA-----------DPDIHTVAGDISKPETADRIVRE   89 (260)
T ss_dssp             HHHHHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS-----------STTEEEEESCTTSHHHHHHHHHH
T ss_pred             hhhhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc-----------cCceEEEEccCCCHHHHHHHHHH
Confidence            3456789999999999999999999999999999999999865432           33689999999999999999999


Q ss_pred             HhhcCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccC
Q 021391          102 YNSQGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSE  179 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~  179 (313)
                      +.+++|++|+||||||+.... . +.+.++|++.+++|+.++++++++++|.|.+     ++.++||++||..+..+.+.
T Consensus        90 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-----~~~g~iv~isS~~~~~~~~~  164 (260)
T 3un1_A           90 GIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLK-----QGSGHIVSITTSLVDQPMVG  164 (260)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-----TTCEEEEEECCTTTTSCBTT
T ss_pred             HHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH-----cCCcEEEEEechhhccCCCC
Confidence            999999999999999987543 2 7789999999999999999999999999998     45789999999877644331


Q ss_pred             CCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCCh
Q 021391          180 GIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNI  259 (313)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  259 (313)
                                   .+...|++||+|++.++++++.|++++|  |+||+|+||+++|++.... .........+..+..+|
T Consensus       165 -------------~~~~~Y~~sKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~~~~~-~~~~~~~~~p~~r~~~~  228 (260)
T 3un1_A          165 -------------MPSALASLTKGGLNAVTRSLAMEFSRSG--VRVNAVSPGVIKTPMHPAE-THSTLAGLHPVGRMGEI  228 (260)
T ss_dssp             -------------CCCHHHHHHHHHHHHHHHHHHHHTTTTT--EEEEEEEECCBCCTTSCGG-GHHHHHTTSTTSSCBCH
T ss_pred             -------------CccHHHHHHHHHHHHHHHHHHHHhCcCC--eEEEEEeecCCCCCCCCHH-HHHHHhccCCCCCCcCH
Confidence                         1457899999999999999999999999  9999999999999987643 22333344566678899


Q ss_pred             HHHHHHHHHHHccCCccCCCceeecCCcccCCC
Q 021391          260 PQGAATTCYVALHPQVQGVSGEYFSDSNIYKPN  292 (313)
Q Consensus       260 ~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~  292 (313)
                      +|+|++++||.   .+.++||+.+.+||+...+
T Consensus       229 ~dva~av~~L~---~~~~itG~~i~vdGG~~~~  258 (260)
T 3un1_A          229 RDVVDAVLYLE---HAGFITGEILHVDGGQNAG  258 (260)
T ss_dssp             HHHHHHHHHHH---HCTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHHhc---ccCCCCCcEEEECCCeecc
Confidence            99999999993   4679999999988876544

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=1.9e-42  Score=305.29  Aligned_cols=239  Identities=22%  Similarity=0.245  Sum_probs=191.8

Q ss_pred             CccchhccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHH
Q 021391           16 STAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASV   95 (313)
Q Consensus        16 ~~~~~~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v   95 (313)
                      +.+-++.+.+++++|++|||||++|||+++|++|+++|++|++++|+.+.++             .+.++.+|++|++++
T Consensus         8 ~~~~~~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~Dl~d~~~v   74 (253)
T 2nm0_A            8 HHHSSGLVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-------------GFLAVKCDITDTEQV   74 (253)
T ss_dssp             ------------CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-------------TSEEEECCTTSHHHH
T ss_pred             cccCCCCCccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-------------cceEEEecCCCHHHH
Confidence            3344566677889999999999999999999999999999999999865432             277899999999999


Q ss_pred             HHHHHHHhhcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391           96 RKFASEYNSQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus        96 ~~~~~~~~~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                      +++++++.++++++|+||||||+....  .+.+.++|++.+++|+.++++++++++|.|.+.     +.++||++||.++
T Consensus        75 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~~  149 (253)
T 2nm0_A           75 EQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRA-----KKGRVVLISSVVG  149 (253)
T ss_dssp             HHHHHHHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHH-----TCEEEEEECCCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCEEEEECchhh
Confidence            999999999999999999999986542  267889999999999999999999999999873     3689999999988


Q ss_pred             cccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHHHH
Q 021391          174 RFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCNTV  251 (313)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~~~  251 (313)
                      ..+.+               +...|++||++++.++++++.|+++.|  |+||+|+||+++|++.....  ....+....
T Consensus       150 ~~~~~---------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~  212 (253)
T 2nm0_A          150 LLGSA---------------GQANYAASKAGLVGFARSLARELGSRN--ITFNVVAPGFVDTDMTKVLTDEQRANIVSQV  212 (253)
T ss_dssp             CCCHH---------------HHHHHHHHHHHHHHHHHHHHHHHCSSS--EEEEEEEECSBCC---------CHHHHHTTC
T ss_pred             CCCCC---------------CcHHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeCcCcCcchhhcCHHHHHHHHhcC
Confidence            87665               678999999999999999999999999  99999999999999865421  111222223


Q ss_pred             HHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          252 GKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       252 ~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      +..+..+|+|+|+.++||++ +.+.++||+++.+||+..
T Consensus       213 p~~~~~~p~dvA~~i~~l~s-~~~~~~tG~~i~vdGG~~  250 (253)
T 2nm0_A          213 PLGRYARPEEIAATVRFLAS-DDASYITGAVIPVDGGLG  250 (253)
T ss_dssp             TTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTTT
T ss_pred             CCCCCcCHHHHHHHHHHHhC-ccccCCcCcEEEECCccc
Confidence            44567899999999999998 778899999999887754

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=3.3e-42  Score=304.06  Aligned_cols=236  Identities=24%  Similarity=0.238  Sum_probs=200.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      ++++||++|||||++|||++++++|+++|++|++++|+.+. ++..+++     . + .++.+|++|+++++++++++.+
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~-----~-~-~~~~~D~~~~~~~~~~~~~~~~   73 (256)
T 2d1y_A            2 GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAI-----G-G-AFFQVDLEDERERVRFVEEAAY   73 (256)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHH-----T-C-EEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHh-----h-C-CEEEeeCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999877 5555444     2 3 7899999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCC-C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          105 QGRPLNILINNAGIMAS-P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~-~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      .+|++|+||||||+... + .+.+.++|++.+++|+.++++++++++|.|.+     ++.++||++||.++..+.+    
T Consensus        74 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~-----~~~g~iv~isS~~~~~~~~----  144 (256)
T 2d1y_A           74 ALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRK-----VGGGAIVNVASVQGLFAEQ----  144 (256)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHT-----TTCEEEEEECCGGGTSBCT----
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-----cCCcEEEEEccccccCCCC----
Confidence            99999999999998654 2 26788999999999999999999999999987     4468999999999887766    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--------chhHhHHHHHHHh
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--------GILRGFCNTVGKL  254 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--------~~~~~~~~~~~~~  254 (313)
                                 +...|++||++++.++++++.|++++|  |+||+|+||+++|++....        .....+....+..
T Consensus       145 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (256)
T 2d1y_A          145 -----------ENAAYNASKGGLVNLTRSLALDLAPLR--IRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALR  211 (256)
T ss_dssp             -----------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTS
T ss_pred             -----------CChhHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCC
Confidence                       678999999999999999999999999  9999999999999875421        1111122222345


Q ss_pred             hcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          255 VLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       255 ~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      +..+|+|+|+.++||++ +.+.++||+.+.++|+...
T Consensus       212 ~~~~~~dvA~~~~~l~s-~~~~~~~G~~~~v~gG~~~  247 (256)
T 2d1y_A          212 RLGKPEEVAEAVLFLAS-EKASFITGAILPVDGGMTA  247 (256)
T ss_dssp             SCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             CCcCHHHHHHHHHHHhC-chhcCCCCCEEEECCCccc
Confidence            57799999999999998 7788999999998876544

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=1.2e-41  Score=299.05  Aligned_cols=231  Identities=26%  Similarity=0.317  Sum_probs=198.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|+++++++++++.++
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~   81 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA--GAKVHVLELDVADRQGVDAAVASTVEA   81 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999998888888877654  457899999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          106 GRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      +|++|+||||||+.... . +.+.++|++.+++|+.++++++++++|.|.+.      +|+||++||.++..+.+     
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~~-----  150 (247)
T 2jah_A           82 LGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRS------KGTVVQMSSIAGRVNVR-----  150 (247)
T ss_dssp             HSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCGGGTCCCT-----
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC------CCEEEEEccHHhcCCCC-----
Confidence            99999999999986442 2 67889999999999999999999999999873      38999999999887766     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccch--hHhHHHHHHHhhc--CCh
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI--LRGFCNTVGKLVL--KNI  259 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~--~~~~~~~~~~~~~--~~~  259 (313)
                                +...|++||++++.++++++.|++++|  |+||+|+||+++|++......  ........+ .+.  .+|
T Consensus       151 ----------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~~~~~~p  217 (247)
T 2jah_A          151 ----------NAAVYQATKFGVNAFSETLRQEVTERG--VRVVVIEPGTTDTELRGHITHTATKEMYEQRI-SQIRKLQA  217 (247)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBSSSGGGGCCCHHHHHHHHHHT-TTSCCBCH
T ss_pred             ----------CCcHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEECCCCCCcchhcccchhhHHHHHhcc-cccCCCCH
Confidence                      678999999999999999999999999  999999999999998654311  111112222 334  799


Q ss_pred             HHHHHHHHHHHccCCccCCCceee
Q 021391          260 PQGAATTCYVALHPQVQGVSGEYF  283 (313)
Q Consensus       260 ~eva~~~~~l~~~~~~~~~tG~~~  283 (313)
                      +|+|+.++||++ +...++++++.
T Consensus       218 edvA~~v~~l~s-~~~~~~~~~i~  240 (247)
T 2jah_A          218 QDIAEAVRYAVT-APHHATVHEIF  240 (247)
T ss_dssp             HHHHHHHHHHHH-SCTTEEEEEEE
T ss_pred             HHHHHHHHHHhC-CCccCccceEE
Confidence            999999999998 66677777653

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=2.8e-42  Score=304.24  Aligned_cols=238  Identities=22%  Similarity=0.237  Sum_probs=200.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      +++||++|||||++|||++++++|+++|++|++++|+.+  ++..+++...  +.++.++.+|++|+++++++++++.++
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~   76 (255)
T 2q2v_A            1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARH--GVKAVHHPADLSDVAQIEALFALAERE   76 (255)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTT--SCCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhc--CCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999876  4455555443  457889999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCC-CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          106 GRPLNILINNAGIMAS-PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~-~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      +|++|+||||||+... +. +.+.++|++.+++|+.++++++++++|.|.+     ++.++||++||.++..+.+     
T Consensus        77 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-----~~~g~iv~isS~~~~~~~~-----  146 (255)
T 2q2v_A           77 FGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRA-----RNWGRIINIASVHGLVGST-----  146 (255)
T ss_dssp             HSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-----TTCEEEEEECCGGGTSCCT-----
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-----cCCcEEEEEcCchhccCCC-----
Confidence            9999999999998654 22 6788999999999999999999999999988     3468999999999887766     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccch-hHhH------------HHH
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI-LRGF------------CNT  250 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~-~~~~------------~~~  250 (313)
                                +...|++||++++.++++++.|++++|  |+||+|+||+++|++...... ....            ...
T Consensus       147 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (255)
T 2q2v_A          147 ----------GKAAYVAAKHGVVGLTKVVGLETATSN--VTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEK  214 (255)
T ss_dssp             ----------TBHHHHHHHHHHHHHHHHHHHHTTTSS--EEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTT
T ss_pred             ----------CchhHHHHHHHHHHHHHHHHHHhcccC--cEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhcc
Confidence                      678999999999999999999999999  999999999999997543210 0000            111


Q ss_pred             HHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          251 VGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       251 ~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      .+..+..+|+|+|+.++||++ +.+.++||+.+.++|+..
T Consensus       215 ~p~~~~~~~~dvA~~~~~l~s-~~~~~~tG~~~~vdgG~~  253 (255)
T 2q2v_A          215 QPSLAFVTPEHLGELVLFLCS-EAGSQVRGAAWNVDGGWL  253 (255)
T ss_dssp             CTTCCCBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTGG
T ss_pred             CCCCCCcCHHHHHHHHHHHhC-CccCCCCCCEEEECCCcc
Confidence            233456799999999999998 778899999999887643

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=6.1e-42  Score=302.70  Aligned_cols=239  Identities=21%  Similarity=0.209  Sum_probs=204.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHH---cCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHH
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLAL---RGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~---~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      ++++||++|||||++|||+++|++|++   +|++|++++|+.+.+++..+++...+++.++.++.+|++|++++++++++
T Consensus         2 ~~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   81 (259)
T 1oaa_A            2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHH
Confidence            468899999999999999999999999   89999999999999888888887765566899999999999999999999


Q ss_pred             Hhh--cCCCee--EEEEcccCCCC---CC-c-cCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391          102 YNS--QGRPLN--ILINNAGIMAS---PF-M-LSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus       102 ~~~--~~g~id--~lv~~ag~~~~---~~-~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                      +.+  .+|++|  +||||||+...   +. + .+.++|++.+++|+.++++++++++|.|.++.   ...|+||++||.+
T Consensus        82 ~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~---~~~g~iv~isS~~  158 (259)
T 1oaa_A           82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSP---GLSKTVVNISSLC  158 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCT---TCEEEEEEECCGG
T ss_pred             HHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc---CCCceEEEEcCch
Confidence            988  678888  99999998643   23 4 57899999999999999999999999997620   0358999999999


Q ss_pred             ccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-------chhH
Q 021391          173 HRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-------GILR  245 (313)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-------~~~~  245 (313)
                      +..+.+               +...|++||++++.|+++++.|++  +  ||||+|+||+++|++....       ....
T Consensus       159 ~~~~~~---------------~~~~Y~asKaa~~~~~~~la~e~~--~--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~  219 (259)
T 1oaa_A          159 ALQPYK---------------GWGLYCAGKAARDMLYQVLAAEEP--S--VRVLSYAPGPLDNDMQQLARETSKDPELRS  219 (259)
T ss_dssp             GTSCCT---------------TCHHHHHHHHHHHHHHHHHHHHCT--T--EEEEEEECCSBSSHHHHHHHHHCSCHHHHH
T ss_pred             hcCCCC---------------CccHHHHHHHHHHHHHHHHHhhCC--C--ceEEEecCCCcCcchHHHHhhccCChhHHH
Confidence            987766               678999999999999999999996  3  9999999999999986532       1112


Q ss_pred             hHHHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCc
Q 021391          246 GFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSN  287 (313)
Q Consensus       246 ~~~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~  287 (313)
                      .+....+..+..+|+|+|+.++||++ + ..++||+++..|+
T Consensus       220 ~~~~~~p~~~~~~p~dvA~~v~~l~~-~-~~~itG~~i~vdg  259 (259)
T 1oaa_A          220 KLQKLKSDGALVDCGTSAQKLLGLLQ-K-DTFQSGAHVDFYD  259 (259)
T ss_dssp             HHHHHHHTTCSBCHHHHHHHHHHHHH-H-CCSCTTEEEETTC
T ss_pred             HHHHhhhcCCcCCHHHHHHHHHHHHh-h-ccccCCcEEeccC
Confidence            23334455678899999999999997 4 6899999998764

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-42  Score=306.47  Aligned_cols=235  Identities=22%  Similarity=0.189  Sum_probs=200.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      +++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++     ..++.++.+|++|+++++++++++.++
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~   77 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVADVSDPKAVEAVFAEALEE   77 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-----CSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999987776655443     246889999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          106 GRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      +|++|+||||||+....  .+.+.++|++.+++|+.+++++++++.|.| +     + .++||++||.++. +.+     
T Consensus        78 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~-----~-~g~iv~isS~~~~-~~~-----  144 (263)
T 2a4k_A           78 FGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-E-----E-GGSLVLTGSVAGL-GAF-----  144 (263)
T ss_dssp             HSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-C-----T-TCEEEEECCCTTC-CHH-----
T ss_pred             cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-h-----c-CCEEEEEecchhc-CCC-----
Confidence            99999999999986542  267889999999999999999999999999 5     3 6899999999887 655     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHHHHHHhhcCChHH
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCNTVGKLVLKNIPQ  261 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~e  261 (313)
                                +...|++||++++.++++++.|++++|  |+||+|+||+++|++.....  ....+....+..+..+|+|
T Consensus       145 ----------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~p~d  212 (263)
T 2a4k_A          145 ----------GLAHYAAGKLGVVGLARTLALELARKG--VRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEE  212 (263)
T ss_dssp             ----------HHHHHHHCSSHHHHHHHHHHHHHTTTT--CEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTCSCBCHHH
T ss_pred             ----------CcHHHHHHHHHHHHHHHHHHHHhhhhC--cEEEEEEeCcCcCchhhhcCHHHHHHHHhcCCCCCCcCHHH
Confidence                      678999999999999999999999999  99999999999999876431  1122222334456789999


Q ss_pred             HHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          262 GAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       262 va~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      +|+.++||++ +.+.++||+++.+||+...
T Consensus       213 vA~~v~~l~s-~~~~~~tG~~i~vdgG~~~  241 (263)
T 2a4k_A          213 VAQAALFLLS-EESAYITGQALYVDGGRSI  241 (263)
T ss_dssp             HHHHHHHHHS-GGGTTCCSCEEEESTTTTT
T ss_pred             HHHHHHHHhC-ccccCCcCCEEEECCCccc
Confidence            9999999998 7789999999998877554

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=9.8e-42  Score=299.46  Aligned_cols=239  Identities=24%  Similarity=0.279  Sum_probs=191.2

Q ss_pred             hhccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHH
Q 021391           20 EVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFA   99 (313)
Q Consensus        20 ~~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~   99 (313)
                      .+....++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     ..++.++.+|+++.+++++++
T Consensus         5 ~~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~   79 (249)
T 3f9i_A            5 HHHHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL-----KDNYTIEVCNLANKEECSNLI   79 (249)
T ss_dssp             ----CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CSSEEEEECCTTSHHHHHHHH
T ss_pred             CccccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----ccCccEEEcCCCCHHHHHHHH
Confidence            345667889999999999999999999999999999999999998888776665     457889999999999988887


Q ss_pred             HHHhhcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccc
Q 021391          100 SEYNSQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAY  177 (313)
Q Consensus       100 ~~~~~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~  177 (313)
                      ++    .+++|+||||||+....  .+.+.++|++.+++|+.++++++++++|.|.+     +..++||++||.++..+.
T Consensus        80 ~~----~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-----~~~g~iv~isS~~~~~~~  150 (249)
T 3f9i_A           80 SK----TSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQ-----KRYGRIINISSIVGIAGN  150 (249)
T ss_dssp             HT----CSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHH-----HTCEEEEEECCCCC--CC
T ss_pred             Hh----cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CCCcEEEEEccHHhccCC
Confidence            64    47899999999987543  26788999999999999999999999999988     347899999999988776


Q ss_pred             cCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHHHHHHhh
Q 021391          178 SEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCNTVGKLV  255 (313)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~  255 (313)
                      +               +...|++||+|++.++++++.|++++|  |+||+|+||+++|++.....  ....+....+..+
T Consensus       151 ~---------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  213 (249)
T 3f9i_A          151 P---------------GQANYCASKAGLIGMTKSLSYEVATRG--ITVNAVAPGFIKSDMTDKLNEKQREAIVQKIPLGT  213 (249)
T ss_dssp             S---------------CSHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBC------CCHHHHHHHHHHCTTCS
T ss_pred             C---------------CCchhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEecCccccCcccccCHHHHHHHHhcCCCCC
Confidence            6               678999999999999999999999999  99999999999999877542  2233444556667


Q ss_pred             cCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          256 LKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       256 ~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      ..+|+|+|++++||++ +.+.++||+++.++|+..
T Consensus       214 ~~~~~dva~~~~~l~s-~~~~~~tG~~~~vdgG~~  247 (249)
T 3f9i_A          214 YGIPEDVAYAVAFLAS-NNASYITGQTLHVNGGML  247 (249)
T ss_dssp             CBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTSS
T ss_pred             CcCHHHHHHHHHHHcC-CccCCccCcEEEECCCEe
Confidence            7889999999999998 778999999999887653

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=3.4e-42  Score=304.85  Aligned_cols=241  Identities=15%  Similarity=0.155  Sum_probs=204.7

Q ss_pred             cCCCCCCCEEEEeCCC--CchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGAS--SGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFAS  100 (313)
Q Consensus        23 ~~~~~~gk~~lItGas--~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~  100 (313)
                      ..++++||++|||||+  +|||+++|++|+++|++|++++|+.+ .++..+++....+  .+.++.+|++|+++++++++
T Consensus         2 ~~~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~   78 (261)
T 2wyu_A            2 LTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALG--GALLFRADVTQDEELDALFA   78 (261)
T ss_dssp             EEECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTT--CCEEEECCTTCHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcC--CcEEEECCCCCHHHHHHHHH
Confidence            3456899999999999  99999999999999999999999875 4555566655432  37899999999999999999


Q ss_pred             HHhhcCCCeeEEEEcccCCCC-----CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccc
Q 021391          101 EYNSQGRPLNILINNAGIMAS-----PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHR  174 (313)
Q Consensus       101 ~~~~~~g~id~lv~~ag~~~~-----~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~  174 (313)
                      ++.+++|++|+||||||+...     +. +.+.++|++.+++|+.+++++++++.|.|.+       +|+||++||.++.
T Consensus        79 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~  151 (261)
T 2wyu_A           79 GVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE-------GGGIVTLTYYASE  151 (261)
T ss_dssp             HHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-------EEEEEEEECGGGT
T ss_pred             HHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc-------CCEEEEEeccccc
Confidence            999999999999999998642     23 6788999999999999999999999998854       5799999999888


Q ss_pred             ccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----hhHhHHHH
Q 021391          175 FAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----ILRGFCNT  250 (313)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----~~~~~~~~  250 (313)
                      .+.+               +...|++||++++.++++++.|++++|  |+||+|+||+++|++.....    ....+...
T Consensus       152 ~~~~---------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~  214 (261)
T 2wyu_A          152 KVVP---------------KYNVMAIAKAALEASVRYLAYELGPKG--VRVNAISAGPVRTVAARSIPGFTKMYDRVAQT  214 (261)
T ss_dssp             SBCT---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCCCCTGGGGCTTHHHHHHHHHHH
T ss_pred             CCCC---------------CchHHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEeeCCCcCchhhhccccHHHHHHHHhc
Confidence            7665               677899999999999999999999999  99999999999999865432    11222333


Q ss_pred             HHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          251 VGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       251 ~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      .+..+..+|+|+|+.++||++ +.+.++||+.+..+|+...
T Consensus       215 ~p~~~~~~~~dva~~v~~l~s-~~~~~~tG~~~~vdgG~~~  254 (261)
T 2wyu_A          215 APLRRNITQEEVGNLGLFLLS-PLASGITGEVVYVDAGYHI  254 (261)
T ss_dssp             STTSSCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCCCCHHHHHHHHHHHcC-hhhcCCCCCEEEECCCccc
Confidence            455667899999999999998 7788999999998877544

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=8.4e-42  Score=305.33  Aligned_cols=251  Identities=19%  Similarity=0.213  Sum_probs=207.7

Q ss_pred             ccchhccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHH
Q 021391           17 TAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVR   96 (313)
Q Consensus        17 ~~~~~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~   96 (313)
                      .+..+...++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|++|.++++
T Consensus        18 gp~~m~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~   92 (281)
T 3ppi_A           18 GPGSMVTIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL-----GNRAEFVSTNVTSEDSVL   92 (281)
T ss_dssp             ------CCGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHH
T ss_pred             CcchhhhhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCceEEEEcCCCCHHHHH
Confidence            334455677899999999999999999999999999999999999998888877766     457999999999999999


Q ss_pred             HHHHHHhhcCCCeeEEEEc-ccCCCCC-------CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhcc-CCCCCeEEE
Q 021391           97 KFASEYNSQGRPLNILINN-AGIMASP-------FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQK-SSREGRIVN  167 (313)
Q Consensus        97 ~~~~~~~~~~g~id~lv~~-ag~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-~~~~g~iv~  167 (313)
                      ++++++ ++++++|++||| +|+....       .+.+.++|++.+++|+.+++++++.+.|.|.+.... .+.+|+||+
T Consensus        93 ~~~~~~-~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~  171 (281)
T 3ppi_A           93 AAIEAA-NQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVL  171 (281)
T ss_dssp             HHHHHH-TTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEE
T ss_pred             HHHHHH-HHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEE
Confidence            999999 788999999999 5554322       146778899999999999999999999999863211 134689999


Q ss_pred             ECCccccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhH
Q 021391          168 VSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILR  245 (313)
Q Consensus       168 isS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~  245 (313)
                      +||.++..+.+               +...|++||+|++.++++++.|++++|  |+||+|+||+++|++.....  ...
T Consensus       172 isS~~~~~~~~---------------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~  234 (281)
T 3ppi_A          172 TASIAGYEGQI---------------GQTAYAAAKAGVIGLTIAAARDLSSAG--IRVNTIAPGTMKTPIMESVGEEALA  234 (281)
T ss_dssp             ECCGGGTSCCT---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHTTCHHHHH
T ss_pred             EecccccCCCC---------------CCcccHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCcCCchhhhcccHHHHH
Confidence            99999988766               678999999999999999999999999  99999999999999876542  222


Q ss_pred             hHHHHHHH-hhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCCc
Q 021391          246 GFCNTVGK-LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNS  293 (313)
Q Consensus       246 ~~~~~~~~-~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~  293 (313)
                      .+....+. .+..+|+|+|++++||++ +  .++||+++.+||+...++
T Consensus       235 ~~~~~~~~~~~~~~pedvA~~v~~l~s-~--~~~tG~~i~vdGG~~~~p  280 (281)
T 3ppi_A          235 KFAANIPFPKRLGTPDEFADAAAFLLT-N--GYINGEVMRLDGAQRFTP  280 (281)
T ss_dssp             HHHHTCCSSSSCBCHHHHHHHHHHHHH-C--SSCCSCEEEESTTCCCCC
T ss_pred             HHHhcCCCCCCCCCHHHHHHHHHHHHc-C--CCcCCcEEEECCCcccCC
Confidence            23333333 567799999999999998 3  689999999988876654

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-42  Score=304.80  Aligned_cols=237  Identities=23%  Similarity=0.267  Sum_probs=203.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      +++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++     +.++.++++|++|+++++++++++.++
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~   77 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRHDVSSEADWTLVMAAVQRR   77 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999988877766655     457889999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCC-C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          106 GRPLNILINNAGIMAS-P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~-~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      +|++|+||||||+... + .+.+.++|++.+++|+.++++++++++|.|.+     +. ++||++||.++..+.+     
T Consensus        78 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-----~~-g~iv~isS~~~~~~~~-----  146 (253)
T 1hxh_A           78 LGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKE-----TG-GSIINMASVSSWLPIE-----  146 (253)
T ss_dssp             HCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT-----TC-EEEEEECCGGGTSCCT-----
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHH-----cC-CEEEEEcchhhcCCCC-----
Confidence            9999999999998653 2 26788999999999999999999999999987     33 8999999999887766     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccC--CCcEEEEEeeCcccccCCcccc---chhHh-HHH---HHHHh
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKED--GVNITANSLHPGSIVTNLFRYN---GILRG-FCN---TVGKL  254 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~--g~~I~vn~i~PG~v~t~~~~~~---~~~~~-~~~---~~~~~  254 (313)
                                +...|++||++++.++++++.|++++  |  |+||+|+||+++|++....   ..... +..   ..+..
T Consensus       147 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~  214 (253)
T 1hxh_A          147 ----------QYAGYSASKAAVSALTRAAALSCRKQGYA--IRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAG  214 (253)
T ss_dssp             ----------TBHHHHHHHHHHHHHHHHHHHHHHHHTCC--EEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTC
T ss_pred             ----------CCccHHHHHHHHHHHHHHHHHHhhhcCCC--eEEEEEEeCCccCchhhhccchhhhHHHHhhhhccCccC
Confidence                      67899999999999999999999998  7  9999999999999875431   11111 111   22345


Q ss_pred             hcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          255 VLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       255 ~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      +..+|+|+|+.++||++ +.+.++||+++.+||+...
T Consensus       215 ~~~~~~dvA~~~~~l~s-~~~~~~tG~~~~vdgG~~~  250 (253)
T 1hxh_A          215 RAYMPERIAQLVLFLAS-DESSVMSGSELHADNSILG  250 (253)
T ss_dssp             CEECHHHHHHHHHHHHS-GGGTTCCSCEEEESSSCTT
T ss_pred             CCCCHHHHHHHHHHHcC-ccccCCCCcEEEECCCccc
Confidence            56799999999999998 7789999999998877543

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=1.8e-41  Score=298.36  Aligned_cols=231  Identities=25%  Similarity=0.253  Sum_probs=187.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      |+++||++|||||++|||++++++|+++|++|++++|+.+.         .   ...+.++.+|++|+++++++++++.+
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~---------~---~~~~~~~~~D~~d~~~~~~~~~~~~~   70 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ---------E---QYPFATEVMDVADAAQVAQVCQRLLA   70 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS---------S---CCSSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh---------h---cCCceEEEcCCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999998652         1   11278899999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          105 QGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      ++|++|+||||||+....  .+.+.++|++.+++|+.++++++++++|.|.++     +.++||++||.++..+.+    
T Consensus        71 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-----~~g~iv~isS~~~~~~~~----  141 (250)
T 2fwm_X           71 ETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQ-----RGGAIVTVASDAAHTPRI----  141 (250)
T ss_dssp             HCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGTSCCT----
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhc-----CCCEEEEECchhhCCCCC----
Confidence            999999999999986542  267889999999999999999999999999873     368999999999887665    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----hhH-hHHH-------H
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----ILR-GFCN-------T  250 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----~~~-~~~~-------~  250 (313)
                                 +...|++||++++.++++++.|++++|  |+||+|+||+++|++.....    ... .+..       .
T Consensus       142 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (250)
T 2fwm_X          142 -----------GMSAYGASKAALKSLALSVGLELAGSG--VRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLG  208 (250)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCC-----------------------------
T ss_pred             -----------CCchHHHHHHHHHHHHHHHHHHhCccC--CEEEEEECCcccCccccccccChhHHHHHHhhhhhccccc
Confidence                       678999999999999999999999999  99999999999999865421    111 2222       3


Q ss_pred             HHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          251 VGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       251 ~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      .+..+..+|+|+|+.++||++ +.+.++||+.+.+||+..
T Consensus       209 ~p~~~~~~p~dvA~~v~~l~s-~~~~~~tG~~i~vdGG~~  247 (250)
T 2fwm_X          209 IPLGKIARPQEIANTILFLAS-DLASHITLQDIVVDGGST  247 (250)
T ss_dssp             -------CHHHHHHHHHHHHS-GGGTTCCSCEEEESTTTT
T ss_pred             CCCCCCcCHHHHHHHHHHHhC-ccccCCCCCEEEECCCcc
Confidence            455667899999999999998 778899999999887754

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=6.3e-42  Score=303.66  Aligned_cols=238  Identities=13%  Similarity=0.158  Sum_probs=202.3

Q ss_pred             CCCCEEEEeCCC--CchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           27 GTGLTAIVTGAS--SGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        27 ~~gk~~lItGas--~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      ++||++|||||+  +|||+++|++|+++|++|++++|+. ..++..+++....+  ...++.+|++|+++++++++++.+
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~   83 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLG--SDIVLQCDVAEDASIDTMFAELGK   83 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHT
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcC--CcEEEEccCCCHHHHHHHHHHHHH
Confidence            789999999999  9999999999999999999999987 45555666655532  347899999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCC-----CC-c-cCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccc
Q 021391          105 QGRPLNILINNAGIMAS-----PF-M-LSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAY  177 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~-----~~-~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~  177 (313)
                      ++|++|+||||||+...     +. + .+.++|++.+++|+.+++++++++.|.|.+       +|+||++||.++..+.
T Consensus        84 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~~  156 (265)
T 1qsg_A           84 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP-------GSALLTLSYLGAERAI  156 (265)
T ss_dssp             TCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEEECGGGTSBC
T ss_pred             HcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc-------CCEEEEEcchhhccCC
Confidence            99999999999998652     22 5 788999999999999999999999999854       5799999999888766


Q ss_pred             cCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchh----HhHHHHHHH
Q 021391          178 SEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGIL----RGFCNTVGK  253 (313)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~----~~~~~~~~~  253 (313)
                      +               +...|++||++++.++++++.|++++|  |+||+|+||+++|++.......    ..+....+.
T Consensus       157 ~---------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~  219 (265)
T 1qsg_A          157 P---------------NYNVMGLAKASLEANVRYMANAMGPEG--VRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI  219 (265)
T ss_dssp             T---------------TTTHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT
T ss_pred             C---------------CchHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeCCCccchhhcccccHHHHHHHHhcCCC
Confidence            6               677899999999999999999999999  9999999999999987643211    222223344


Q ss_pred             hhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCC
Q 021391          254 LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPN  292 (313)
Q Consensus       254 ~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~  292 (313)
                      .+..+|+|+|+.++||++ +.+.++||+++.+||+...+
T Consensus       220 ~~~~~~~dva~~v~~l~s-~~~~~~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          220 RRTVTIEDVGNSAAFLCS-DLSAGISGEVVHVDGGFSIA  257 (265)
T ss_dssp             SSCCCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTGGGB
T ss_pred             CCCCCHHHHHHHHHHHhC-chhcCccCCEEEECCCcCCC
Confidence            567899999999999998 77889999999988775543

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=9.1e-42  Score=303.05  Aligned_cols=231  Identities=20%  Similarity=0.238  Sum_probs=193.4

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      +..++.+|++|||||++|||+++|++|+++|++|++++|+.+++++..        ..++.++.+|++|.++++++++++
T Consensus        10 m~~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~Dv~d~~~v~~~~~~~   81 (266)
T 3p19_A           10 MGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN--------LPNTLCAQVDVTDKYTFDTAITRA   81 (266)
T ss_dssp             -----CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC--------CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh--------cCCceEEEecCCCHHHHHHHHHHH
Confidence            345678999999999999999999999999999999999976654321        347889999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          103 NSQGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      .+.+|++|+||||||+.... . +.+.++|++.+++|+.++++++++++|.|.+.     ..|+||++||.++..+.+  
T Consensus        82 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-----~~g~IV~isS~~~~~~~~--  154 (266)
T 3p19_A           82 EKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKAR-----NCGTIINISSIAGKKTFP--  154 (266)
T ss_dssp             HHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGTSCCT--
T ss_pred             HHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEEcChhhCCCCC--
Confidence            99999999999999987542 2 77889999999999999999999999999883     478999999999988766  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccch---hHhHHH-HHHHhhc
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI---LRGFCN-TVGKLVL  256 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~---~~~~~~-~~~~~~~  256 (313)
                                   +...|++||+++++++++++.|++++|  ||||+|+||+++|++......   ...+.. ..+..+.
T Consensus       155 -------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~r~  219 (266)
T 3p19_A          155 -------------DHAAYCGTKFAVHAISENVREEVAASN--VRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDMGGV  219 (266)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHHHTTCC
T ss_pred             -------------CCchHHHHHHHHHHHHHHHHHHhcccC--cEEEEEeeCccccchhhcccchhhhHHHHhhcccccCC
Confidence                         678999999999999999999999999  999999999999998765421   111111 2355677


Q ss_pred             CChHHHHHHHHHHHccCCccCCCceeec
Q 021391          257 KNIPQGAATTCYVALHPQVQGVSGEYFS  284 (313)
Q Consensus       257 ~~~~eva~~~~~l~~~~~~~~~tG~~~~  284 (313)
                      .+|+|+|++++||+++ ....++++++.
T Consensus       220 ~~pedvA~av~~l~~~-~~~~~~~~i~i  246 (266)
T 3p19_A          220 LAADDVARAVLFAYQQ-PQNVCIREIAL  246 (266)
T ss_dssp             BCHHHHHHHHHHHHHS-CTTEEEEEEEE
T ss_pred             CCHHHHHHHHHHHHcC-CCCccceeeEE
Confidence            8999999999999994 45556666544

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=8e-42  Score=304.91  Aligned_cols=242  Identities=25%  Similarity=0.262  Sum_probs=198.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHh-CCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKE-IPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++... ..+.++.++.+|++|+++++++++++.+
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   82 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999998888877776432 1245789999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCCC-C-cc----CccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc-cccc
Q 021391          105 QGRPLNILINNAGIMASP-F-ML----SKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH-RFAY  177 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~-~-~~----~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~-~~~~  177 (313)
                      ++|++|+||||||+.... . +.    +.++|++.+++|+.+++++++++.|.|.+.      +++||++||.++ ..+.
T Consensus        83 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------~g~iv~isS~~~~~~~~  156 (278)
T 1spx_A           83 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST------KGEIVNISSIASGLHAT  156 (278)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCTTSSSSCC
T ss_pred             HcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc------CCeEEEEecccccccCC
Confidence            999999999999976432 2 45    889999999999999999999999999873      489999999988 6665


Q ss_pred             cCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc-----h------hHh
Q 021391          178 SEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG-----I------LRG  246 (313)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~-----~------~~~  246 (313)
                      +               +...|++||++++.++++++.|++++|  |+||+|+||+++|++.....     .      ...
T Consensus       157 ~---------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  219 (278)
T 1spx_A          157 P---------------DFPYYSIAKAAIDQYTRNTAIDLIQHG--IRVNSISPGLVATGFGSAMGMPEETSKKFYSTMAT  219 (278)
T ss_dssp             T---------------TSHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCCCC--------------HHHHHH
T ss_pred             C---------------CccHHHHHHHHHHHHHHHHHHHHHhcC--cEEEEEecCcccCccccccccCchhhhhhhHHHHH
Confidence            5               677899999999999999999999999  99999999999999865321     1      112


Q ss_pred             HHHHHHHhhcCChHHHHHHHHHHHccCCccC-CCceeecCCcccCC
Q 021391          247 FCNTVGKLVLKNIPQGAATTCYVALHPQVQG-VSGEYFSDSNIYKP  291 (313)
Q Consensus       247 ~~~~~~~~~~~~~~eva~~~~~l~~~~~~~~-~tG~~~~~~~~~~~  291 (313)
                      +....+..+..+|+|+|+.++||++ +...+ +||+++.++|+...
T Consensus       220 ~~~~~p~~~~~~~~dvA~~v~~l~s-~~~~~~~tG~~~~vdgG~~~  264 (278)
T 1spx_A          220 MKECVPAGVMGQPQDIAEVIAFLAD-RKTSSYIIGHQLVVDGGSSL  264 (278)
T ss_dssp             HHHHCTTSSCBCHHHHHHHHHHHHC-HHHHTTCCSCEEEESTTGGG
T ss_pred             HHhcCCCcCCCCHHHHHHHHHHHcC-ccccCcccCcEEEECCCccc
Confidence            2223344567899999999999998 66666 99999998877543

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=7.8e-42  Score=314.17  Aligned_cols=234  Identities=21%  Similarity=0.234  Sum_probs=200.3

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchh-------HHHHHHHHHHhCCCCceEEEEccCCCHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAA-------GKDVREAIVKEIPSAKVDAMELDVSSLASV   95 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v   95 (313)
                      +.++++||++|||||++|||+++|++|+++|++|++++|+.+.       +++..+++...  +.++.++.+|++|++++
T Consensus        39 ~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~--g~~~~~~~~Dv~d~~~v  116 (346)
T 3kvo_A           39 NTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV--GGKALPCIVDVRDEQQI  116 (346)
T ss_dssp             CCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHT--TCEEEEEECCTTCHHHH
T ss_pred             cCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHH
Confidence            5567999999999999999999999999999999999998764       45666666554  56899999999999999


Q ss_pred             HHHHHHHhhcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391           96 RKFASEYNSQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus        96 ~~~~~~~~~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                      +++++++.+++|++|+||||||+....  .+.+.++|++++++|+.++++++++++|+|.+     ++.++||++||..+
T Consensus       117 ~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~-----~~~g~IV~iSS~~~  191 (346)
T 3kvo_A          117 SAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKK-----SKVAHILNISPPLN  191 (346)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTT-----CSSCEEEEECCCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-----CCCCEEEEECCHHH
Confidence            999999999999999999999987542  37888999999999999999999999999987     45799999999988


Q ss_pred             cccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcc-cccCCccccchhHhHHHHHH
Q 021391          174 RFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGS-IVTNLFRYNGILRGFCNTVG  252 (313)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~-v~t~~~~~~~~~~~~~~~~~  252 (313)
                      ..+.+             +++...|++||++++.++++++.|++ .|  |+||+|+||+ ++|++....      ....+
T Consensus       192 ~~~~~-------------~~~~~~Y~aSKaal~~l~~~la~e~~-~g--Irvn~v~PG~~i~T~~~~~~------~~~~~  249 (346)
T 3kvo_A          192 LNPVW-------------FKQHCAYTIAKYGMSMYVLGMAEEFK-GE--IAVNALWPKTAIHTAAMDML------GGPGI  249 (346)
T ss_dssp             CCGGG-------------TSSSHHHHHHHHHHHHHHHHHHHHTT-TT--CEEEEEECSBCBCCHHHHHH------CC--C
T ss_pred             cCCCC-------------CCCchHHHHHHHHHHHHHHHHHHHhc-CC--cEEEEEeCCCccccHHHHhh------ccccc
Confidence            76621             11678999999999999999999999 88  9999999995 888764321      11224


Q ss_pred             HhhcCChHHHHHHHHHHHccCCccCCCceeecCCc
Q 021391          253 KLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSN  287 (313)
Q Consensus       253 ~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~  287 (313)
                      ..+..+|+|+|++++||++ + +.++||+++.+++
T Consensus       250 ~~r~~~pedvA~~v~~L~s-~-~~~itG~~ivdgg  282 (346)
T 3kvo_A          250 ESQCRKVDIIADAAYSIFQ-K-PKSFTGNFVIDEN  282 (346)
T ss_dssp             GGGCBCTHHHHHHHHHHHT-S-CTTCCSCEEEHHH
T ss_pred             cccCCCHHHHHHHHHHHHh-c-CCCCCceEEECCc
Confidence            5567899999999999998 6 8899999984433

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=9.2e-42  Score=301.98  Aligned_cols=236  Identities=22%  Similarity=0.235  Sum_probs=202.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.++.++..+++.     .++.++.+|++|+++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~   77 (260)
T 1nff_A            3 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA-----DAARYVHLDVTQPAQWKAAVDTAVT   77 (260)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG-----GGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-----cCceEEEecCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999887776655542     2588899999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCC-C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          105 QGRPLNILINNAGIMAS-P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~-~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      ++|++|+||||||+... + .+.+.++|++.+++|+.++++++++++|.|.++     +.++||++||.++..+.+    
T Consensus        78 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~----  148 (260)
T 1nff_A           78 AFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA-----GRGSIINISSIEGLAGTV----  148 (260)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCT----
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCCEEEEEeehhhcCCCC----
Confidence            99999999999998654 2 267889999999999999999999999999873     368999999999887765    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHH
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQG  262 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~ev  262 (313)
                                 +...|++||++++.++++++.|++++|  |+||+|+||++.|++.....  ..+. ..+..+..+|+|+
T Consensus       149 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~--~~~~-~~~~~~~~~~~dv  212 (260)
T 1nff_A          149 -----------ACHGYTATKFAVRGLTKSTALELGPSG--IRVNSIHPGLVKTPMTDWVP--EDIF-QTALGRAAEPVEV  212 (260)
T ss_dssp             -----------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCSGGGTTSC--TTCS-CCSSSSCBCHHHH
T ss_pred             -----------CchhHHHHHHHHHHHHHHHHHHhCccC--cEEEEEEeCCCCCCccccch--hhHH-hCccCCCCCHHHH
Confidence                       677999999999999999999999999  99999999999999754110  0110 1233456789999


Q ss_pred             HHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          263 AATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       263 a~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      |+.++||++ +.+.++||+.+..+|+...
T Consensus       213 A~~v~~l~s-~~~~~~~G~~~~v~gG~~~  240 (260)
T 1nff_A          213 SNLVVYLAS-DESSYSTGAEFVVDGGTVA  240 (260)
T ss_dssp             HHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHhC-ccccCCcCCEEEECCCeec
Confidence            999999997 7788999999998766543

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-41  Score=302.18  Aligned_cols=238  Identities=21%  Similarity=0.246  Sum_probs=201.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      ..+++||++|||||++|||++++++|+++|++|++++|+.+..++..+++      .++.++.+|++|+++++++++++.
T Consensus         4 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~~~   77 (270)
T 1yde_A            4 GTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL------PGAVFILCDVTQEDDVKTLVSETI   77 (270)
T ss_dssp             CCTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------TTEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------cCCeEEEcCCCCHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999987766554432      247889999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCC--CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          104 SQGRPLNILINNAGIMAS--PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      +++|++|+||||||+...  +. +.+.++|++.+++|+.+++++++++.|+|.+.      .++||++||..+..+.+  
T Consensus        78 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------~g~iv~isS~~~~~~~~--  149 (270)
T 1yde_A           78 RRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS------QGNVINISSLVGAIGQA--  149 (270)
T ss_dssp             HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCHHHHHCCT--
T ss_pred             HHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC------CCEEEEEcCccccCCCC--
Confidence            999999999999998643  22 67889999999999999999999999999763      58999999998887766  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-----chhHhH---HHHHH
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-----GILRGF---CNTVG  252 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-----~~~~~~---~~~~~  252 (313)
                                   ....|++||++++.++++++.|++++|  |+||+|+||+++|++....     ......   ....+
T Consensus       150 -------------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p  214 (270)
T 1yde_A          150 -------------QAVPYVATKGAVTAMTKALALDESPYG--VRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQP  214 (270)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTST
T ss_pred             -------------CCcccHHHHHHHHHHHHHHHHHhhhhC--cEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCC
Confidence                         677899999999999999999999999  9999999999999975431     111111   12234


Q ss_pred             HhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCC
Q 021391          253 KLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPN  292 (313)
Q Consensus       253 ~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~  292 (313)
                      ..+..+|+|+|+.++||++ + +.++||+.+.+||+....
T Consensus       215 ~~r~~~p~dva~~v~~L~s-~-~~~itG~~i~vdGG~~~~  252 (270)
T 1yde_A          215 LGRMGQPAEVGAAAVFLAS-E-ANFCTGIELLVTGGAELG  252 (270)
T ss_dssp             TSSCBCHHHHHHHHHHHHH-H-CTTCCSCEEEESTTTTSC
T ss_pred             CCCCcCHHHHHHHHHHHcc-c-CCCcCCCEEEECCCeecc
Confidence            4567899999999999998 5 689999999988876554

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=1.6e-41  Score=302.68  Aligned_cols=245  Identities=16%  Similarity=0.125  Sum_probs=198.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEec-CchhHHHHHHHHHHhCCCCceEEEEccCCCH----HHHHHHHH
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVR-NMAAGKDVREAIVKEIPSAKVDAMELDVSSL----ASVRKFAS  100 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~----~~v~~~~~  100 (313)
                      +|+||++|||||++|||+++|++|+++|++|++++| +.+.++++.+++.... +.++.++.+|++|.    ++++++++
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~   86 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR-AGSAVLCKGDLSLSSSLLDCCEDIID   86 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSTTHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhc-CCceEEEeccCCCccccHHHHHHHHH
Confidence            368999999999999999999999999999999999 8888888888776542 34688999999999    99999999


Q ss_pred             HHhhcCCCeeEEEEcccCCCCC-C-ccCc-----------cchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEE
Q 021391          101 EYNSQGRPLNILINNAGIMASP-F-MLSK-----------DNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVN  167 (313)
Q Consensus       101 ~~~~~~g~id~lv~~ag~~~~~-~-~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~  167 (313)
                      ++.+.+|++|+||||||+.... . +.+.           ++|++.+++|+.++++++++++|.|.+.......+++||+
T Consensus        87 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~  166 (276)
T 1mxh_A           87 CSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVN  166 (276)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEE
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEE
Confidence            9999999999999999986542 2 5566           8999999999999999999999998621000012389999


Q ss_pred             ECCccccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-chhHh
Q 021391          168 VSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-GILRG  246 (313)
Q Consensus       168 isS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-~~~~~  246 (313)
                      +||.++..+.+               +...|++||++++.|+++++.|++++|  |+||+|+||+++|+ .... .....
T Consensus       167 isS~~~~~~~~---------------~~~~Y~asK~a~~~l~~~la~e~~~~g--i~v~~v~PG~v~t~-~~~~~~~~~~  228 (276)
T 1mxh_A          167 LCDAMTDLPLP---------------GFCVYTMAKHALGGLTRAAALELAPRH--IRVNAVAPGLSLLP-PAMPQETQEE  228 (276)
T ss_dssp             ECCGGGGSCCT---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBSCC-SSSCHHHHHH
T ss_pred             ECchhhcCCCC---------------CCeehHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCcccCC-ccCCHHHHHH
Confidence            99999887766               678999999999999999999999999  99999999999999 2111 11122


Q ss_pred             HHHHHHHhh-cCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          247 FCNTVGKLV-LKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       247 ~~~~~~~~~-~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      +....+..+ ..+|+|+|+.++||++ +.+.++||+++.+||+..
T Consensus       229 ~~~~~p~~r~~~~~~dva~~v~~l~s-~~~~~~tG~~~~vdgG~~  272 (276)
T 1mxh_A          229 YRRKVPLGQSEASAAQIADAIAFLVS-KDAGYITGTTLKVDGGLI  272 (276)
T ss_dssp             HHTTCTTTSCCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             HHhcCCCCCCCCCHHHHHHHHHHHhC-ccccCccCcEEEECCchh
Confidence            222234455 7799999999999998 778899999999887654

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=5.3e-42  Score=301.97  Aligned_cols=236  Identities=27%  Similarity=0.304  Sum_probs=204.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEE-ecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMA-VRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      ++||++|||||++|||+++|++|+++|++|+++ .|+.+..++..+++...  +.++.++.+|+++.++++.+++++.+.
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN--GGSAFSIGANLESLHGVEALYSSLDNE   82 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhc--CCceEEEecCcCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999886 67778888888887765  568899999999999999999998776


Q ss_pred             C------CCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccc
Q 021391          106 G------RPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAY  177 (313)
Q Consensus       106 ~------g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~  177 (313)
                      +      +++|+||||||+.....  +.+.++|++.+++|+.++++++++++|.|.+       +++||++||.++..+.
T Consensus        83 ~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~~~iv~isS~~~~~~~  155 (255)
T 3icc_A           83 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD-------NSRIINISSAATRISL  155 (255)
T ss_dssp             HHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-------EEEEEEECCGGGTSCC
T ss_pred             hcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC-------CCEEEEeCChhhccCC
Confidence            5      35999999999865432  6788999999999999999999999999844       5799999999998877


Q ss_pred             cCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccch----hHhHHHHHHH
Q 021391          178 SEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI----LRGFCNTVGK  253 (313)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~----~~~~~~~~~~  253 (313)
                      +               ....|++||+|++.++++++.|++++|  |+||+|+||+++|++......    ........+.
T Consensus       156 ~---------------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  218 (255)
T 3icc_A          156 P---------------DFIAYSMTKGAINTMTFTLAKQLGARG--ITVNAILPGFVKTDMNAELLSDPMMKQYATTISAF  218 (255)
T ss_dssp             T---------------TBHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTT
T ss_pred             C---------------CcchhHHhHHHHHHHHHHHHHHHHhcC--eEEEEEEEeeecccchhhhcccHHHHHhhhccCCc
Confidence            6               678999999999999999999999999  999999999999999775421    1222223344


Q ss_pred             hhcCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          254 LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       254 ~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      .+..+|+|+|++++||++ +.+.++||+++.+||+.
T Consensus       219 ~~~~~~~dva~~~~~l~s-~~~~~~tG~~i~vdgG~  253 (255)
T 3icc_A          219 NRLGEVEDIADTAAFLAS-PDSRWVTGQLIDVSGGS  253 (255)
T ss_dssp             SSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESSST
T ss_pred             CCCCCHHHHHHHHHHHhC-cccCCccCCEEEecCCe
Confidence            567799999999999998 88899999999988765

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=2.5e-42  Score=307.04  Aligned_cols=235  Identities=18%  Similarity=0.198  Sum_probs=196.6

Q ss_pred             CCCCCEEEEeCC--CCchHHHHHHHHHHcCCEEEEEecCchhH-HHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           26 DGTGLTAIVTGA--SSGIGTETARVLALRGVHVIMAVRNMAAG-KDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        26 ~~~gk~~lItGa--s~giG~aia~~La~~G~~V~l~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      +++||++|||||  ++|||+++|++|+++|++|++++|+.++. ++..    ++. +.++.++.+|++|+++++++++++
T Consensus         4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~----~~~-~~~~~~~~~Dv~~~~~v~~~~~~~   78 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT----DRL-PAKAPLLELDVQNEEHLASLAGRV   78 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHH----TTS-SSCCCEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHH----Hhc-CCCceEEEccCCCHHHHHHHHHHH
Confidence            578999999999  99999999999999999999999987652 3332    222 346889999999999999999999


Q ss_pred             hhcCC---CeeEEEEcccCCC------CCC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391          103 NSQGR---PLNILINNAGIMA------SPF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus       103 ~~~~g---~id~lv~~ag~~~------~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                      .+++|   ++|+||||||+..      .+. +.+.++|++.+++|+.++++++++++|+|.+       +|+||++||..
T Consensus        79 ~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~iss~~  151 (269)
T 2h7i_A           79 TEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP-------GGSIVGMDFDP  151 (269)
T ss_dssp             HHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEEECCC
T ss_pred             HHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc-------CCeEEEEcCcc
Confidence            99998   9999999999865      222 6788999999999999999999999999865       47999999976


Q ss_pred             ccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc------c----
Q 021391          173 HRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN------G----  242 (313)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~------~----  242 (313)
                      + .+.+               .+..|++||++++.++++++.|++++|  ||||+|+||+++|++....      +    
T Consensus       152 ~-~~~~---------------~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~  213 (269)
T 2h7i_A          152 S-RAMP---------------AYNWMTVAKSALESVNRFVAREAGKYG--VRSNLVAAGPIRTLAMSAIVGGALGEEAGA  213 (269)
T ss_dssp             S-SCCT---------------TTHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCCCCHHHHHHHTTTTCHHHHH
T ss_pred             c-cccC---------------chHHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCcccchhhhccccccchhhHHH
Confidence            5 3333               567899999999999999999999999  9999999999999975421      0    


Q ss_pred             ----hhHhHHHHHHHh-hcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          243 ----ILRGFCNTVGKL-VLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       243 ----~~~~~~~~~~~~-~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                          ..+.+....+.. +..+|+|+|+.++||++ +.+.++||+.+.+||+...
T Consensus       214 ~~~~~~~~~~~~~p~~rr~~~p~dvA~~v~~L~s-~~~~~itG~~i~vdGG~~~  266 (269)
T 2h7i_A          214 QIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLS-DWLPATTGDIIYADGGAHT  266 (269)
T ss_dssp             HHHHHHHHHHHHCTTCCCTTCCHHHHHHHHHHHS-SSCTTCCSEEEEESTTGGG
T ss_pred             HHHHHHHhhhccCCcccCCCCHHHHHHHHHHHhC-chhccCcceEEEecCCeee
Confidence                011122333445 57899999999999998 8889999999998887543

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=2.2e-41  Score=308.02  Aligned_cols=254  Identities=20%  Similarity=0.237  Sum_probs=212.0

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEE---------ecCchhHHHHHHHHHHhCCCCceEEEEccCCCHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMA---------VRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLA   93 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~---------~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~   93 (313)
                      ..|+++||++|||||++|||+++|++|+++|++|+++         +|+.+++++..+++....  ..   ..+|+++.+
T Consensus         3 ~~~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~--~~---~~~D~~~~~   77 (319)
T 1gz6_A            3 SPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG--GK---AVANYDSVE   77 (319)
T ss_dssp             CCCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTT--CE---EEEECCCGG
T ss_pred             CCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhC--Ce---EEEeCCCHH
Confidence            3477899999999999999999999999999999996         456777787777776542  22   358999999


Q ss_pred             HHHHHHHHHhhcCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCc
Q 021391           94 SVRKFASEYNSQGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSE  171 (313)
Q Consensus        94 ~v~~~~~~~~~~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~  171 (313)
                      +++++++++.+.++++|+||||||+.... . +.+.++|+..+++|+.++++++++++|.|.++     ..++||++||.
T Consensus        78 ~~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~grIV~vsS~  152 (319)
T 1gz6_A           78 AGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ-----NYGRIIMTASA  152 (319)
T ss_dssp             GHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----TCEEEEEECCH
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEECCh
Confidence            99999999999999999999999987553 2 67889999999999999999999999999883     36899999999


Q ss_pred             cccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHH
Q 021391          172 AHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTV  251 (313)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~  251 (313)
                      ++..+.+               ++..|++||++++.|+++++.|++++|  |+||+|+||++ |++..... ...     
T Consensus       153 ~~~~~~~---------------~~~~Y~aSK~a~~~~~~~la~el~~~g--I~vn~v~PG~~-t~~~~~~~-~~~-----  208 (319)
T 1gz6_A          153 SGIYGNF---------------GQANYSAAKLGLLGLANTLVIEGRKNN--IHCNTIAPNAG-SRMTETVM-PED-----  208 (319)
T ss_dssp             HHHHCCT---------------TCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEEECC-STTTGGGS-CHH-----
T ss_pred             hhccCCC---------------CCHHHHHHHHHHHHHHHHHHHHhcccC--EEEEEEeCCCc-cccccccC-Chh-----
Confidence            8887766               678999999999999999999999999  99999999998 87654321 111     


Q ss_pred             HHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC--------------CCccCCCHHHHHHHHHHHHhhhC
Q 021391          252 GKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK--------------PNSQGQNMELAKKLWDFSMNLVK  313 (313)
Q Consensus       252 ~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~  313 (313)
                       .....+|+|+|+.++||++ + ..+++|+++.++|+..              .++...|++.++++|+.++++++
T Consensus       209 -~~~~~~p~dvA~~~~~l~s-~-~~~~tG~~~~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~  281 (319)
T 1gz6_A          209 -LVEALKPEYVAPLVLWLCH-E-SCEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICDFSN  281 (319)
T ss_dssp             -HHHHSCGGGTHHHHHHHTS-T-TCCCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTCCTT
T ss_pred             -hhccCCHHHHHHHHHHHhC-c-hhhcCCCEEEECCCeEEEEeeeeccceeccCCCCCCCHHHHHHHHHHhhcccc
Confidence             1124689999999999997 4 3578999998654421              13556799999999999998753

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=2.3e-41  Score=299.31  Aligned_cols=237  Identities=21%  Similarity=0.211  Sum_probs=194.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|+++++++++++.++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL--GGQCVPVVCDSSQESEVRSLFEQVDRE   79 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--SSEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc--CCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            368999999999999999999999999999999999998888888887665  457899999999999999999999886


Q ss_pred             -CCCeeEEEEccc--CC------CCC-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccc
Q 021391          106 -GRPLNILINNAG--IM------ASP-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRF  175 (313)
Q Consensus       106 -~g~id~lv~~ag--~~------~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~  175 (313)
                       +|++|+||||||  +.      ..+ .+.+.++|++.+++|+.+++++++.+.|.|.+     ++.|+||++||.++..
T Consensus        80 ~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~g~iv~isS~~~~~  154 (260)
T 2qq5_A           80 QQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVP-----AGQGLIVVISSPGSLQ  154 (260)
T ss_dssp             HTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGG-----GTCCEEEEECCGGGTS
T ss_pred             cCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhh-----cCCcEEEEEcChhhcC
Confidence             899999999995  32      122 36788999999999999999999999999987     3468999999998765


Q ss_pred             cccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhH-----hHHH-
Q 021391          176 AYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILR-----GFCN-  249 (313)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~-----~~~~-  249 (313)
                      +.                +...|++||++++.++++++.|++++|  |+||+|+||+++|++........     .... 
T Consensus       155 ~~----------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  216 (260)
T 2qq5_A          155 YM----------------FNVPYGVGKAACDKLAADCAHELRRHG--VSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQ  216 (260)
T ss_dssp             CC----------------SSHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEECCCSCTTTC-----------------
T ss_pred             CC----------------CCCchHHHHHHHHHHHHHHHHHhccCC--eEEEEEecCccccHHHHHhhccccccchhHHHH
Confidence            32                346899999999999999999999999  99999999999999865421000     0011 


Q ss_pred             -HHHHhhcCChHHHHHHHHHHHccCCc-cCCCceeecCCcc
Q 021391          250 -TVGKLVLKNIPQGAATTCYVALHPQV-QGVSGEYFSDSNI  288 (313)
Q Consensus       250 -~~~~~~~~~~~eva~~~~~l~~~~~~-~~~tG~~~~~~~~  288 (313)
                       ..+..+..+|+|+|+.++||++ +.+ .++||+++.+++.
T Consensus       217 ~~~~~~~~~~pe~va~~v~~l~s-~~~~~~itG~~i~~~~~  256 (260)
T 2qq5_A          217 FKSAFSSAETTELSGKCVVALAT-DPNILSLSGKVLPSCDL  256 (260)
T ss_dssp             -----CHHHHHHHHHHHHHHHHT-CTTGGGGTTCEEEHHHH
T ss_pred             HHhhhccCCCHHHHHHHHHHHhc-Ccccccccceeechhhh
Confidence             1122334689999999999998 554 5899999987653

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=3.2e-41  Score=300.22  Aligned_cols=241  Identities=28%  Similarity=0.299  Sum_probs=198.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEE-ecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMA-VRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      .++|++|||||++|||+++|++|+++|++|+++ .|+.+..++..+++...  +.++.++.+|++|.++++++++++.++
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~  101 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES--GGEAVAIPGDVGNAADIAAMFSAVDRQ  101 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            368999999999999999999999999999887 67877788777777665  568999999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCC--CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          106 GRPLNILINNAGIMAS--PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      ++++|+||||||+...  +. +.+.+++++.+++|+.+++++++.++|.|.+..  ....++||++||.++..+.+.   
T Consensus       102 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~~~g~iv~isS~~~~~~~~~---  176 (272)
T 4e3z_A          102 FGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLY--SGQGGAIVNVSSMAAILGSAT---  176 (272)
T ss_dssp             HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGG--TCCCEEEEEECCTHHHHCCTT---
T ss_pred             CCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhc--cCCCCEEEEEcchHhccCCCC---
Confidence            9999999999998753  22 678899999999999999999999999997732  134689999999998776442   


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc---chhHhHHHHHHHhhcCCh
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN---GILRGFCNTVGKLVLKNI  259 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~  259 (313)
                                 .+..|++||+|++.++++++.|++++|  |+||+|+||+++|++....   ..........+..+..+|
T Consensus       177 -----------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (272)
T 4e3z_A          177 -----------QYVDYAASKAAIDTFTIGLAREVAAEG--IRVNAVRPGIIETDLHASGGLPDRAREMAPSVPMQRAGMP  243 (272)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBC------------------CCTTSSCBCH
T ss_pred             -----------CcchhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEecCCCcCCcccccCChHHHHHHhhcCCcCCCcCH
Confidence                       456799999999999999999999999  9999999999999987642   122223333445567789


Q ss_pred             HHHHHHHHHHHccCCccCCCceeecCCcc
Q 021391          260 PQGAATTCYVALHPQVQGVSGEYFSDSNI  288 (313)
Q Consensus       260 ~eva~~~~~l~~~~~~~~~tG~~~~~~~~  288 (313)
                      +|+|++++||++ +.+.++||+++.+||+
T Consensus       244 edvA~~i~~l~s-~~~~~~tG~~i~vdgG  271 (272)
T 4e3z_A          244 EEVADAILYLLS-PSASYVTGSILNVSGG  271 (272)
T ss_dssp             HHHHHHHHHHHS-GGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHhC-CccccccCCEEeecCC
Confidence            999999999998 7889999999998765

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=1.8e-41  Score=300.78  Aligned_cols=229  Identities=24%  Similarity=0.238  Sum_probs=196.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+.             +.++.++.+|++|+++++++++++.+
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------------~~~~~~~~~Dl~~~~~v~~~~~~~~~   70 (264)
T 2dtx_A            4 SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-------------EAKYDHIECDVTNPDQVKASIDHIFK   70 (264)
T ss_dssp             GGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-------------SCSSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-------------CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            34789999999999999999999999999999999998654             24688999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCC-C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          105 QGRPLNILINNAGIMAS-P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~-~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      ++|++|+||||||+... + .+.+.++|++.+++|+.++++++++++|.|.+     ++.++||++||.++..+.+    
T Consensus        71 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-----~~~g~iv~isS~~~~~~~~----  141 (264)
T 2dtx_A           71 EYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIR-----SRDPSIVNISSVQASIITK----  141 (264)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTT-----SSSCEEEEECCGGGTSCCT----
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH-----cCCcEEEEECCchhccCCC----
Confidence            99999999999998654 2 26788999999999999999999999999987     4468999999999887665    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-------------chhHhHHH
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-------------GILRGFCN  249 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-------------~~~~~~~~  249 (313)
                                 +...|++||++++.++++++.|+++.   |+||+|+||+++|++....             .....+..
T Consensus       142 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~---i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (264)
T 2dtx_A          142 -----------NASAYVTSKHAVIGLTKSIALDYAPL---LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGH  207 (264)
T ss_dssp             -----------TBHHHHHHHHHHHHHHHHHHHHHTTT---SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHH
T ss_pred             -----------CchhHHHHHHHHHHHHHHHHHHhcCC---cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHh
Confidence                       67899999999999999999999875   9999999999999975432             11111222


Q ss_pred             HHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          250 TVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       250 ~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      ..+..+..+|+|+|+.++||++ +.+.++||+.+.++|+..
T Consensus       208 ~~p~~~~~~p~dvA~~v~~l~s-~~~~~~tG~~i~vdGG~~  247 (264)
T 2dtx_A          208 EHPMQRIGKPQEVASAVAFLAS-REASFITGTCLYVDGGLS  247 (264)
T ss_dssp             HSTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             cCCCCCCcCHHHHHHHHHHHhC-chhcCCCCcEEEECCCcc
Confidence            3344567899999999999998 778899999999776643

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=1.4e-40  Score=293.56  Aligned_cols=245  Identities=22%  Similarity=0.216  Sum_probs=207.6

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      +..|++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++...  +.++.++.+|++|++++++++++
T Consensus         6 ~~~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~   83 (260)
T 3awd_A            6 MEKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME--GHDVSSVVMDVTNTESVQNAVRS   83 (260)
T ss_dssp             TGGGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHH
Confidence            4557899999999999999999999999999999999999988888777777654  45789999999999999999999


Q ss_pred             HhhcCCCeeEEEEcccCCC-C-C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccccc
Q 021391          102 YNSQGRPLNILINNAGIMA-S-P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYS  178 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~~-~-~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~  178 (313)
                      +.++++++|+||||||+.. . + .+.+.+++++.+++|+.+++++++++.|.|.+.     +.++||++||.++..+.+
T Consensus        84 ~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~  158 (260)
T 3awd_A           84 VHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQ-----KQGVIVAIGSMSGLIVNR  158 (260)
T ss_dssp             HHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCS
T ss_pred             HHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhc-----CCCEEEEEecchhcccCC
Confidence            9999999999999999865 2 2 267888999999999999999999999999873     368999999998876654


Q ss_pred             CCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcc-cc---chhHhHHHHHHHh
Q 021391          179 EGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR-YN---GILRGFCNTVGKL  254 (313)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~-~~---~~~~~~~~~~~~~  254 (313)
                      .             .+...|+++|++++.++++++.+++++|  |+||+|+||++.|++.. ..   .+...+....+..
T Consensus       159 ~-------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~g--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  223 (260)
T 3awd_A          159 P-------------QQQAAYNASKAGVHQYIRSLAAEWAPHG--IRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMG  223 (260)
T ss_dssp             S-------------SCCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTTS
T ss_pred             C-------------CCccccHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeeeeccchhhcccCChHHHHHHHhcCCcC
Confidence            1             0237899999999999999999999999  99999999999999876 21   1122222233445


Q ss_pred             hcCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          255 VLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       255 ~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      +..+|+|+|+.++++++ +...+++|+.+..+++.
T Consensus       224 ~~~~~~dva~~~~~l~~-~~~~~~~G~~~~v~gg~  257 (260)
T 3awd_A          224 RVGQPDEVASVVQFLAS-DAASLMTGAIVNVDAGF  257 (260)
T ss_dssp             SCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTT
T ss_pred             CCCCHHHHHHHHHHHhC-chhccCCCcEEEECCce
Confidence            57799999999999998 66789999999987654

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=2.4e-41  Score=297.09  Aligned_cols=232  Identities=23%  Similarity=0.311  Sum_probs=192.9

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      ..++++||++|||||++|||++++++|+++|++|++++|+.++.++             +..+.+|++|+++++++++++
T Consensus         9 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-------------~~~~~~D~~~~~~~~~~~~~~   75 (247)
T 1uzm_A            9 AKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-------------LFGVEVDVTDSDAVDRAFTAV   75 (247)
T ss_dssp             CCCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-------------SEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH-------------hcCeeccCCCHHHHHHHHHHH
Confidence            4456899999999999999999999999999999999998754321             224899999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          103 NSQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      .+.++++|+||||||+....  .+.+.++|++.+++|+.++++++++++|.|.+     ++.++||++||.++..+.+  
T Consensus        76 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-----~~~g~iv~isS~~~~~~~~--  148 (247)
T 1uzm_A           76 EEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQR-----NKFGRMIFIGSVSGLWGIG--  148 (247)
T ss_dssp             HHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-----TTCEEEEEECCCCC-------
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-----CCCCEEEEECCHhhccCCC--
Confidence            99999999999999986542  27788999999999999999999999999987     4468999999999887766  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHHHHHHhhcCC
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCNTVGKLVLKN  258 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~  258 (313)
                                   +...|++||++++.++++++.|++++|  |+||+|+||+++|++.....  ....+....+..+..+
T Consensus       149 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~  213 (247)
T 1uzm_A          149 -------------NQANYAASKAGVIGMARSIARELSKAN--VTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGT  213 (247)
T ss_dssp             -------------CCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTCSCBC
T ss_pred             -------------CChhHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEEeCCCcccchhhcCHHHHHHHHhcCCCCCCcC
Confidence                         678999999999999999999999999  99999999999999755321  1111112223455779


Q ss_pred             hHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          259 IPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       259 ~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      |+|+|+.++||++ +.+.++||+++..||+..
T Consensus       214 ~~dvA~~~~~l~s-~~~~~~~G~~i~vdgG~~  244 (247)
T 1uzm_A          214 PAEVAGVVSFLAS-EDASYISGAVIPVDGGMG  244 (247)
T ss_dssp             HHHHHHHHHHHHS-GGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHHHHcC-ccccCCcCCEEEECCCcc
Confidence            9999999999998 778899999999887754

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=5.5e-41  Score=297.40  Aligned_cols=247  Identities=22%  Similarity=0.206  Sum_probs=192.0

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      ...|++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++...  +.++.++.+|+++++++++++++
T Consensus         7 ~~~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~   84 (266)
T 1xq1_A            7 SQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGSVCDASLRPEREKLMQT   84 (266)
T ss_dssp             CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeeEEEECCCCCHHHHHHHHHH
Confidence            3557899999999999999999999999999999999999998888887777654  45789999999999999999999


Q ss_pred             HhhcC-CCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccccc
Q 021391          102 YNSQG-RPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYS  178 (313)
Q Consensus       102 ~~~~~-g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~  178 (313)
                      +.+.+ +++|+||||||+....  .+.+.++|++.+++|+.+++++++++.|.|.+.     ..++||++||.++..+.+
T Consensus        85 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~  159 (266)
T 1xq1_A           85 VSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKAS-----GCGNIIFMSSIAGVVSAS  159 (266)
T ss_dssp             HHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----SSCEEEEEC---------
T ss_pred             HHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEccchhccCCC
Confidence            99888 8999999999976442  267889999999999999999999999999873     368999999998877655


Q ss_pred             CCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc---chhHhHHHHHHHhh
Q 021391          179 EGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN---GILRGFCNTVGKLV  255 (313)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~---~~~~~~~~~~~~~~  255 (313)
                                     +...|+++|++++.++++++.+++++|  |+||+|+||++.|++....   .+...+....+..+
T Consensus       160 ---------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  222 (266)
T 1xq1_A          160 ---------------VGSIYSATKGALNQLARNLACEWASDG--IRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGR  222 (266)
T ss_dssp             ----------------CCHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEECCSCC------------------------
T ss_pred             ---------------CCchHHHHHHHHHHHHHHHHHHHhHhC--cEEEEEeeCCCccchhhhhcCHHHHHHHHhcCCCCC
Confidence                           567899999999999999999999999  9999999999999986542   11222223344556


Q ss_pred             cCChHHHHHHHHHHHccCCccCCCceeecCCcccCCCc
Q 021391          256 LKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNS  293 (313)
Q Consensus       256 ~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~  293 (313)
                      ..+|+|+|+.+++|++ +.+.+++|+.+..+|+.....
T Consensus       223 ~~~~~dva~~~~~l~~-~~~~~~~G~~~~v~gG~~~~~  259 (266)
T 1xq1_A          223 FGEPEEVSSLVAFLCM-PAASYITGQTICVDGGLTVNG  259 (266)
T ss_dssp             -CCGGGGHHHHHHHTS-GGGTTCCSCEEECCCCEEETT
T ss_pred             CcCHHHHHHHHHHHcC-ccccCccCcEEEEcCCccccc
Confidence            7899999999999997 778899999999887765443

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=1.6e-40  Score=289.21  Aligned_cols=231  Identities=21%  Similarity=0.218  Sum_probs=199.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      ++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.... +.++.++.+|++|+++++++++++.+++|
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQ-GVEVFYHHLDVSKAESVEEFSKKVLERFG   79 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            47999999999999999999999999999999999999998888886443 56899999999999999999999999999


Q ss_pred             CeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCC
Q 021391          108 PLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDK  185 (313)
Q Consensus       108 ~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  185 (313)
                      ++|+||||||+.....  +.+.++|++.+++|+.++++++++++|.|.+.      ++++|+++|..+..+.+       
T Consensus        80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------~~~ii~~sS~~~~~~~~-------  146 (235)
T 3l77_A           80 DVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT------GGLALVTTSDVSARLIP-------  146 (235)
T ss_dssp             SCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCGGGSSCCT-------
T ss_pred             CCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc------CCcEEEEecchhcccCC-------
Confidence            9999999999875432  77899999999999999999999999999542      68999999998887766       


Q ss_pred             CCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHHHHH
Q 021391          186 INDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGAAT  265 (313)
Q Consensus       186 ~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~eva~~  265 (313)
                              ....|++||++++.+++++  ++...|  ||||+|+||+++|++........      ...+..+|+|+|+.
T Consensus       147 --------~~~~Y~~sKaa~~~~~~~l--~~~~~~--i~v~~v~PG~v~T~~~~~~~~~~------~~~~~~~p~dva~~  208 (235)
T 3l77_A          147 --------YGGGYVSTKWAARALVRTF--QIENPD--VRFFELRPGAVDTYFGGSKPGKP------KEKGYLKPDEIAEA  208 (235)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHH--HHHCTT--SEEEEEEECSBSSSTTTCCSCCC------GGGTCBCHHHHHHH
T ss_pred             --------CcchHHHHHHHHHHHHHHH--hhcCCC--eEEEEEeCCccccccccccCCcc------cccCCCCHHHHHHH
Confidence                    6678999999999999999  445667  99999999999999977542111      12256789999999


Q ss_pred             HHHHHccCCccCCCceeecCCcccCC
Q 021391          266 TCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       266 ~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      ++||++ +...+++|+++..++..++
T Consensus       209 v~~l~~-~~~~~~~~~~~~~~~~~~~  233 (235)
T 3l77_A          209 VRCLLK-LPKDVRVEELMLRSVYQRP  233 (235)
T ss_dssp             HHHHHT-SCTTCCCCEEEECCTTSCC
T ss_pred             HHHHHc-CCCCCccceEEEeecccCC
Confidence            999998 7778899998887766544

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=6.9e-41  Score=293.53  Aligned_cols=227  Identities=17%  Similarity=0.209  Sum_probs=191.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEE-e--cCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMA-V--RNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~-~--r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      ||++|||||++|||++++++|+++|++|+++ +  |+.+++++..+++    .+       .|+.|+++++++++++.++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~----~~-------~~~~~~~~v~~~~~~~~~~   69 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN----PG-------TIALAEQKPERLVDATLQH   69 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS----TT-------EEECCCCCGGGHHHHHGGG
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh----CC-------CcccCHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999 6  9988777665544    12       1233777888899999999


Q ss_pred             CCCeeEEEEcccCCCC----CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          106 GRPLNILINNAGIMAS----PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~----~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      +|++|+||||||+...    +. +.+.++|++.+++|+.++++++++++|.|.+     ++.++||++||.++..+.+  
T Consensus        70 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-----~~~g~iv~isS~~~~~~~~--  142 (244)
T 1zmo_A           70 GEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRA-----AGGASVIFITSSVGKKPLA--  142 (244)
T ss_dssp             SSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-----TTCEEEEEECCGGGTSCCT--
T ss_pred             cCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-----cCCcEEEEECChhhCCCCC--
Confidence            9999999999998654    22 7788999999999999999999999999988     4478999999999887766  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCc---ccc---chhHhHHH-HHHH
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLF---RYN---GILRGFCN-TVGK  253 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~---~~~---~~~~~~~~-~~~~  253 (313)
                                   +...|++||++++.|+++++.|++++|  |+||+|+||+++|++.   ...   +....+.. ..+.
T Consensus       143 -------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~  207 (244)
T 1zmo_A          143 -------------YNPLYGPARAATVALVESAAKTLSRDG--ILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPL  207 (244)
T ss_dssp             -------------TCTTHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCTT
T ss_pred             -------------CchHHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCCC
Confidence                         678999999999999999999999999  9999999999999987   432   11122222 3455


Q ss_pred             hhcCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          254 LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       254 ~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      .+..+|+|+|+.++||++ +.+.++||+++.+||+.
T Consensus       208 ~r~~~pe~vA~~v~~l~s-~~~~~~tG~~i~vdgG~  242 (244)
T 1zmo_A          208 GRLGRPDEMGALITFLAS-RRAAPIVGQFFAFTGGY  242 (244)
T ss_dssp             CSCBCHHHHHHHHHHHHT-TTTGGGTTCEEEESTTC
T ss_pred             CCCcCHHHHHHHHHHHcC-ccccCccCCEEEeCCCC
Confidence            567899999999999998 78899999999988764

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=1.9e-40  Score=292.94  Aligned_cols=241  Identities=22%  Similarity=0.243  Sum_probs=204.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEec-CchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVR-NMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      +++||++|||||++|||++++++|+++|++|++++| +.+..++..+++...  +.++.++.+|++|+++++++++++.+
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (261)
T 1gee_A            4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV--GGEAIAVKGDVTVESDVINLVQSAIK   81 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999 777777777777654  45788999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCC-CCeEEEECCccccccccCCC
Q 021391          105 QGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSR-EGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~-~g~iv~isS~~~~~~~~~~~  181 (313)
                      +++++|+||||||+.... . +.+.+++++.+++|+.++++++++++|.|.+     +. .++||++||..+..+.+   
T Consensus        82 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~-----~~~~~~iv~isS~~~~~~~~---  153 (261)
T 1gee_A           82 EFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVE-----NDIKGTVINMSSVHEKIPWP---  153 (261)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-----TTCCCEEEEECCGGGTSCCT---
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh-----CCCCCEEEEeCCHHhcCCCC---
Confidence            999999999999986542 2 6788999999999999999999999999987     33 68999999998877655   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----hhHhHHHHHHHhhcC
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----ILRGFCNTVGKLVLK  257 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~  257 (313)
                                  +...|++||++++.++++++.+++++|  |+||+|+||++.|++.....    ....+....+..+..
T Consensus       154 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (261)
T 1gee_A          154 ------------LFVHYAASKGGMKLMTETLALEYAPKG--IRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIG  219 (261)
T ss_dssp             ------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCB
T ss_pred             ------------CccHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeCCcCCchhhhcccChhHHHHHHhcCCCCCCc
Confidence                        678999999999999999999999999  99999999999999865321    111111122334567


Q ss_pred             ChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          258 NIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       258 ~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      +|+|+|+.+++|++ +.+.+++|+++..+|+...
T Consensus       220 ~~~dva~~~~~l~~-~~~~~~~G~~~~v~gg~~~  252 (261)
T 1gee_A          220 EPEEIAAVAAWLAS-SEASYVTGITLFADGGMTL  252 (261)
T ss_dssp             CHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             CHHHHHHHHHHHhC-ccccCCCCcEEEEcCCccc
Confidence            99999999999997 7778999999998766543

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=3.1e-40  Score=290.18  Aligned_cols=230  Identities=21%  Similarity=0.281  Sum_probs=187.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      |++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|++|+++++++++++.+++|++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   75 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVRNRAAIEEMLASLPAEWCNI   75 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHTSCTTTCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            68999999999999999999999999999999988877766655     3468899999999999999999999999999


Q ss_pred             eEEEEcccCCC--CCC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          110 NILINNAGIMA--SPF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       110 d~lv~~ag~~~--~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                      |+||||||+..  .+. +.+.++|++.+++|+.++++++++++|.|.+.     ..++||++||.++..+.+        
T Consensus        76 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~~~~~~~--------  142 (248)
T 3asu_A           76 DILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER-----NHGHIINIGSTAGSWPYA--------  142 (248)
T ss_dssp             CEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGTSCCT--------
T ss_pred             CEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCceEEEEccchhccCCC--------
Confidence            99999999863  233 77889999999999999999999999999873     368999999999887766        


Q ss_pred             CCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccc-cCCcccc-c-hhHhHHHHHHHhhcCChHHHH
Q 021391          187 NDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIV-TNLFRYN-G-ILRGFCNTVGKLVLKNIPQGA  263 (313)
Q Consensus       187 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~-t~~~~~~-~-~~~~~~~~~~~~~~~~~~eva  263 (313)
                             +...|++||++++.++++++.|++++|  ||||+|+||+++ |++.... . ...............+|+|+|
T Consensus       143 -------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA  213 (248)
T 3asu_A          143 -------GGNVYGATKAFVRQFSLNLRTDLHGTA--VRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVS  213 (248)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHTTTSC--CEEEEEEECSBCC----------------------CCBCHHHHH
T ss_pred             -------CCchHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEeccccccCcchhhcccCchHHHHHHHhccCCCCHHHHH
Confidence                   678999999999999999999999999  999999999999 9985421 0 000111111122346899999


Q ss_pred             HHHHHHHccCCccCCCceeecCCcc
Q 021391          264 ATTCYVALHPQVQGVSGEYFSDSNI  288 (313)
Q Consensus       264 ~~~~~l~~~~~~~~~tG~~~~~~~~  288 (313)
                      +.++||++ + ..+++|+.+..+..
T Consensus       214 ~~v~~l~s-~-~~~~~g~~i~v~~~  236 (248)
T 3asu_A          214 EAVWWVST-L-PAHVNINTLEMMPV  236 (248)
T ss_dssp             HHHHHHHH-S-CTTCCCCEEEECCT
T ss_pred             HHHHHHhc-C-CccceeeEEEEccc
Confidence            99999998 4 47899998886543

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=1.3e-40  Score=290.86  Aligned_cols=229  Identities=21%  Similarity=0.201  Sum_probs=193.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      +|++|||||++|||++++++|+++|++|++++|+.++   ..+++     +  +.++.+|+++ ++++++++++.+.+++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~-----~--~~~~~~D~~~-~~~~~~~~~~~~~~g~   70 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL-----G--AVPLPTDLEK-DDPKGLVKRALEALGG   70 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH-----T--CEEEECCTTT-SCHHHHHHHHHHHHTS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh-----C--cEEEecCCch-HHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999999999765   22232     2  7789999999 9999999999999999


Q ss_pred             eeEEEEcccCCCC-C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          109 LNILINNAGIMAS-P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       109 id~lv~~ag~~~~-~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                      +|+||||||+... + .+.+.++|++.+++|+.++++++++++|.|.+.     +.++||++||.++..+.+        
T Consensus        71 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~--------  137 (239)
T 2ekp_A           71 LHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEA-----GWGRVLFIGSVTTFTAGG--------  137 (239)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCT--------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEECchhhccCCC--------
Confidence            9999999998654 2 267889999999999999999999999999873     368999999999876651        


Q ss_pred             CCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----hhHhHHHHHHHhhcCChHHH
Q 021391          187 NDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----ILRGFCNTVGKLVLKNIPQG  262 (313)
Q Consensus       187 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~ev  262 (313)
                           .++...|++||++++.++++++.|++++|  |+||+|+||+++|++.....    ....+....+..+..+|+|+
T Consensus       138 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dv  210 (239)
T 2ekp_A          138 -----PVPIPAYTTAKTALLGLTRALAKEWARLG--IRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEI  210 (239)
T ss_dssp             -----TSCCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTTSSCBCHHHH
T ss_pred             -----CCCCccHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEEeCCccCchhhccccCHHHHHHHHhcCCCCCCcCHHHH
Confidence                 01677999999999999999999999999  99999999999999865321    11112222344566799999


Q ss_pred             HHHHHHHHccCCccCCCceeecCCccc
Q 021391          263 AATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       263 a~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      |+.++||++ +.+.++||+++.+||+.
T Consensus       211 A~~~~~l~s-~~~~~~tG~~~~vdgG~  236 (239)
T 2ekp_A          211 ARVAAVLCG-DEAEYLTGQAVAVDGGF  236 (239)
T ss_dssp             HHHHHHHTS-GGGTTCCSCEEEESTTT
T ss_pred             HHHHHHHcC-chhcCCCCCEEEECCCc
Confidence            999999998 77889999999988764

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=4e-40  Score=291.27  Aligned_cols=253  Identities=23%  Similarity=0.220  Sum_probs=207.5

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      ...+++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++.... +.++.++.+|++|++++++++++
T Consensus         7 ~~~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~   85 (265)
T 1h5q_A            7 GFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVSNTDIVTKTIQQ   85 (265)
T ss_dssp             CEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH-TCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhc-CCeeEEEEeeCCCHHHHHHHHHH
Confidence            34567899999999999999999999999999999999998777666666665443 45789999999999999999999


Q ss_pred             HhhcCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccC
Q 021391          102 YNSQGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSE  179 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~  179 (313)
                      +.++++++|+||||||+.... . +.+.+++++.+++|+.+++++++++.|.|.+.    ...++||++||..+..+.+.
T Consensus        86 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~----~~~~~iv~~sS~~~~~~~~~  161 (265)
T 1h5q_A           86 IDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQK----QQKGSIVVTSSMSSQIINQS  161 (265)
T ss_dssp             HHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCCEEEEEECCGGGTSCCEE
T ss_pred             HHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhc----CCCceEEEeCCchhhccccc
Confidence            999999999999999986542 2 67889999999999999999999999999874    22489999999987655431


Q ss_pred             CCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHHHHHHhhcC
Q 021391          180 GIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCNTVGKLVLK  257 (313)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~  257 (313)
                      .        ..+..+...|++||++++.++++++.+++++|  |+||+|+||+++|++.....  ....+....+..+..
T Consensus       162 ~--------~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  231 (265)
T 1h5q_A          162 S--------LNGSLTQVFYNSSKAACSNLVKGLAAEWASAG--IRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFA  231 (265)
T ss_dssp             E--------TTEECSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCB
T ss_pred             c--------ccccccccccHHHHHHHHHHHHHHHHHHHhcC--cEEEEEecCccccccccccchhHHHHHHhcCcccCCC
Confidence            0        01122367899999999999999999999999  99999999999999876531  112222223445577


Q ss_pred             ChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          258 NIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       258 ~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      +|+|+|+.+++|++ +.+.+++|+.+..+|+..
T Consensus       232 ~~~dva~~~~~l~~-~~~~~~~G~~~~v~gG~~  263 (265)
T 1h5q_A          232 QPEEMTGQAILLLS-DHATYMTGGEYFIDGGQL  263 (265)
T ss_dssp             CGGGGHHHHHHHHS-GGGTTCCSCEEEECTTGG
T ss_pred             CHHHHHHHHHhhcc-CchhcCcCcEEEecCCEe
Confidence            99999999999998 677899999998877643

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=8e-41  Score=297.90  Aligned_cols=250  Identities=22%  Similarity=0.235  Sum_probs=190.7

Q ss_pred             CCCCCCCCCccchhccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEc
Q 021391            8 GPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL   87 (313)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~   87 (313)
                      ++..+|+......   ..+|+ |++|||||++|||+++|++|+++|++|++++|+.+++++..+++...   .++.++.+
T Consensus         4 ~~~~~~~~~~~~~---~~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~   76 (272)
T 2nwq_A            4 HHHHHHSSGLVPR---GSHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK---TRVLPLTL   76 (272)
T ss_dssp             --------------------C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT---SCEEEEEC
T ss_pred             cccccccCccccc---CCCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC---CcEEEEEc
Confidence            4455555555543   23355 99999999999999999999999999999999988888777666432   46889999


Q ss_pred             cCCCHHHHHHHHHHHhhcCCCeeEEEEcccCCCC--CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCC-
Q 021391           88 DVSSLASVRKFASEYNSQGRPLNILINNAGIMAS--PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREG-  163 (313)
Q Consensus        88 D~s~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g-  163 (313)
                      |++|+++++++++++.+++|++|+||||||+...  +. +.+.++|++.+++|+.+++++++.++|.|.+.     ..| 
T Consensus        77 Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-----~~g~  151 (272)
T 2nwq_A           77 DVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAH-----GAGA  151 (272)
T ss_dssp             CTTCHHHHHHHHHTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----CTTC
T ss_pred             CCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCc
Confidence            9999999999999999999999999999998642  33 77889999999999999999999999999873     357 


Q ss_pred             eEEEECCccccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-c
Q 021391          164 RIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-G  242 (313)
Q Consensus       164 ~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-~  242 (313)
                      +||++||.++..+.+               +...|+++|++++.|+++++.|++++|  |+||+|+||+++|++.... .
T Consensus       152 ~IV~isS~~~~~~~~---------------~~~~Y~asKaa~~~l~~~la~el~~~g--Irvn~v~PG~v~T~~~~~~~~  214 (272)
T 2nwq_A          152 SIVNLGSVAGKWPYP---------------GSHVYGGTKAFVEQFSLNLRCDLQGTG--VRVTNLEPGLCESEFSLVRFG  214 (272)
T ss_dssp             EEEEECCGGGTSCCT---------------TCHHHHHHHHHHHHHHHHHHTTCTTSC--CEEEEEEECSBC---------
T ss_pred             EEEEeCCchhccCCC---------------CCchHHHHHHHHHHHHHHHHHHhCccC--eEEEEEEcCCCcCcchhcccc
Confidence            999999999887666               678899999999999999999999999  9999999999999986432 0


Q ss_pred             -hhHhHHHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcc
Q 021391          243 -ILRGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNI  288 (313)
Q Consensus       243 -~~~~~~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~  288 (313)
                       ...............+|+|+|+.++||++ + ..+++|+.+..++.
T Consensus       215 ~~~~~~~~~~~~~~~~~pedvA~~v~~l~s-~-~~~~~g~~i~v~~~  259 (272)
T 2nwq_A          215 GDQARYDKTYAGAHPIQPEDIAETIFWIMN-Q-PAHLNINSLEIMPV  259 (272)
T ss_dssp             -----------CCCCBCHHHHHHHHHHHHT-S-CTTEEEEEEEEEET
T ss_pred             cchHHHHHhhccCCCCCHHHHHHHHHHHhC-C-CccCccceEEEeec
Confidence             00011111112234689999999999998 3 57899998886644

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=7.5e-41  Score=293.61  Aligned_cols=231  Identities=21%  Similarity=0.261  Sum_probs=190.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      +++||++|||||++|||++++++|+++|++|++++|+.+++++.. +    .  .++.++.+|++|++++++    +.++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~----~--~~~~~~~~D~~~~~~~~~----~~~~   71 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-K----Y--PGIQTRVLDVTKKKQIDQ----FANE   71 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-G----S--TTEEEEECCTTCHHHHHH----HHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-h----c--cCceEEEeeCCCHHHHHH----HHHH
Confidence            578999999999999999999999999999999999976655432 2    1  268899999999999874    4445


Q ss_pred             CCCeeEEEEcccCCCC-CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          106 GRPLNILINNAGIMAS-PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~-~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      ++++|+||||||+... +. +.+.++|++.+++|+.++++++++++|+|.++     +.++||++||.++..+.+.    
T Consensus        72 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~----  142 (246)
T 2ag5_A           72 VERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ-----KSGNIINMSSVASSVKGVV----  142 (246)
T ss_dssp             CSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCSBTTTBCCT----
T ss_pred             hCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCceEEEEechHhCcCCCC----
Confidence            7899999999998654 22 67889999999999999999999999999873     3689999999988765431    


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--------chhHhHHHHHHHhh
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--------GILRGFCNTVGKLV  255 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--------~~~~~~~~~~~~~~  255 (313)
                                +...|++||++++.++++++.|++++|  |+||+|+||+++|++....        .....+....+..+
T Consensus       143 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (246)
T 2ag5_A          143 ----------NRCVYSTTKAAVIGLTKSVAADFIQQG--IRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGR  210 (246)
T ss_dssp             ----------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSS
T ss_pred             ----------CCccHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCC
Confidence                      457899999999999999999999999  9999999999999975431        01111222224455


Q ss_pred             cCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          256 LKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       256 ~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      ..+|+|+|+.++||++ +.+.++||+.+.+||+.
T Consensus       211 ~~~~~dvA~~v~~l~s-~~~~~~tG~~i~vdgG~  243 (246)
T 2ag5_A          211 FATAEEIAMLCVYLAS-DESAYVTGNPVIIDGGW  243 (246)
T ss_dssp             CEEHHHHHHHHHHHHS-GGGTTCCSCEEEECTTG
T ss_pred             CCCHHHHHHHHHHHhC-ccccCCCCCEEEECCCc
Confidence            6799999999999998 78899999999988764

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=2.2e-40  Score=298.76  Aligned_cols=268  Identities=19%  Similarity=0.186  Sum_probs=218.5

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      ...++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+ +.++.++.+|++|.+++++++++
T Consensus        19 ~~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~   97 (302)
T 1w6u_A           19 LPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVRDPDMVQNTVSE   97 (302)
T ss_dssp             SCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCceEEEEeCCCCHHHHHHHHHH
Confidence            35567899999999999999999999999999999999999988888887776543 34789999999999999999999


Q ss_pred             HhhcCCCeeEEEEcccCCCC-CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccC
Q 021391          102 YNSQGRPLNILINNAGIMAS-PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSE  179 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~~~-~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~  179 (313)
                      +.+.++++|+||||||+... +. +.+.+++++.+++|+.+++++++++.|.|.+.    ...++||++||.++..+.+ 
T Consensus        98 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~----~~~~~iv~isS~~~~~~~~-  172 (302)
T 1w6u_A           98 LIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKA----QKGAAFLSITTIYAETGSG-  172 (302)
T ss_dssp             HHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----TCCEEEEEECCTHHHHCCT-
T ss_pred             HHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh----cCCCEEEEEcccccccCCC-
Confidence            99999999999999997643 22 67889999999999999999999999999842    3468999999998887655 


Q ss_pred             CCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccC-Cccccc----hhHhHHHHHHHh
Q 021391          180 GIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTN-LFRYNG----ILRGFCNTVGKL  254 (313)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~-~~~~~~----~~~~~~~~~~~~  254 (313)
                                    +...|++||++++.++++++.+++++|  |+||+|+||++.|+ +.....    ....+....+..
T Consensus       173 --------------~~~~Y~~sK~a~~~~~~~la~~~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~  236 (302)
T 1w6u_A          173 --------------FVVPSASAKAGVEAMSKSLAAEWGKYG--MRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCG  236 (302)
T ss_dssp             --------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCC------CCTTSHHHHHHHTTCTTS
T ss_pred             --------------CcchhHHHHHHHHHHHHHHHHHhhhcC--cEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCcC
Confidence                          677899999999999999999999999  99999999999997 433221    111222233444


Q ss_pred             hcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCCcc---CCCHHHHHHHHHHHHhhh
Q 021391          255 VLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQ---GQNMELAKKLWDFSMNLV  312 (313)
Q Consensus       255 ~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  312 (313)
                      +..+|+|+|++++++++ +...+++|+++..+++...+-.   ....+...+.|+++++++
T Consensus       237 ~~~~~~dva~~~~~l~~-~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~  296 (302)
T 1w6u_A          237 RLGTVEELANLAAFLCS-DYASWINGAVIKFDGGEEVLISGEFNDLRKVTKEQWDTIEELI  296 (302)
T ss_dssp             SCBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCHHHHHHHTTC-
T ss_pred             CCCCHHHHHHHHHHHcC-CcccccCCCEEEECCCeeeccCCccccchhhccccccChhhhc
Confidence            56799999999999997 6778999999997766543321   224455678899998765

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=3.4e-40  Score=295.63  Aligned_cols=242  Identities=26%  Similarity=0.305  Sum_probs=204.4

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      ..+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|+++++++++++
T Consensus        38 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~  115 (285)
T 2c07_A           38 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGDVSKKEEISEVINKI  115 (285)
T ss_dssp             CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc--CCceeEEECCCCCHHHHHHHHHHH
Confidence            346789999999999999999999999999999999999988888877777654  457899999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          103 NSQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      .+.++++|+||||||+....  .+.+.+++++.+++|+.+++++++.+.|.|.+.     +.++||++||.++..+.+  
T Consensus       116 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~--  188 (285)
T 2c07_A          116 LTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN-----RYGRIINISSIVGLTGNV--  188 (285)
T ss_dssp             HHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-----TCEEEEEECCTHHHHCCT--
T ss_pred             HHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-----CCCEEEEECChhhccCCC--
Confidence            99999999999999987542  267889999999999999999999999999873     368999999998887766  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHHHHHHhhcCC
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCNTVGKLVLKN  258 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~  258 (313)
                                   +...|++||++++.++++++.++++.|  |+||+|+||+++|++.....  ....+....+..+..+
T Consensus       189 -------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  253 (285)
T 2c07_A          189 -------------GQANYSSSKAGVIGFTKSLAKELASRN--ITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGT  253 (285)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCC-----CCHHHHHHHHTTCTTSSCBC
T ss_pred             -------------CCchHHHHHHHHHHHHHHHHHHHHHhC--cEEEEEEeCcEecCchhhcCHHHHHHHHhhCCCCCCCC
Confidence                         678899999999999999999999999  99999999999999866432  1111222233445679


Q ss_pred             hHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          259 IPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       259 ~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      |+|+|++++++++ +...+++|+++..+|+.
T Consensus       254 ~~dvA~~~~~l~~-~~~~~~~G~~i~v~gG~  283 (285)
T 2c07_A          254 PEEVANLACFLSS-DKSGYINGRVFVIDGGL  283 (285)
T ss_dssp             HHHHHHHHHHHHS-GGGTTCCSCEEEESTTS
T ss_pred             HHHHHHHHHHHhC-CCcCCCCCCEEEeCCCc
Confidence            9999999999998 77789999999987764

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=1.5e-41  Score=297.64  Aligned_cols=225  Identities=19%  Similarity=0.180  Sum_probs=191.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHH-cCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           27 GTGLTAIVTGASSGIGTETARVLAL-RGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~-~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      .++|++|||||++|||+++|++|++ .|++|++++|+.+.            ....+.++.+|++|+++++++++.+.  
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~------------~~~~~~~~~~Dv~~~~~v~~~~~~~~--   67 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF------------SAENLKFIKADLTKQQDITNVLDIIK--   67 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC------------CCTTEEEEECCTTCHHHHHHHHHHTT--
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc------------ccccceEEecCcCCHHHHHHHHHHHH--
Confidence            4689999999999999999999999 78899999988641            13357899999999999999996553  


Q ss_pred             CCCeeEEEEcccCCCC-C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          106 GRPLNILINNAGIMAS-P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~-~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      ++++|+||||||+... + .+.+.++|++.+++|+.+++++++++.|.|.+       +++||++||..+..+.+     
T Consensus        68 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~-------~g~iv~~sS~~~~~~~~-----  135 (244)
T 4e4y_A           68 NVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKV-------GASIVFNGSDQCFIAKP-----  135 (244)
T ss_dssp             TCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEE-------EEEEEEECCGGGTCCCT-----
T ss_pred             hCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhcc-------CcEEEEECCHHHccCCC-----
Confidence            7799999999998754 2 37889999999999999999999999999866       47999999999988766     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc-------------hhHhHHHH
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG-------------ILRGFCNT  250 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~-------------~~~~~~~~  250 (313)
                                +...|++||++++.|+++++.|++++|  |+||+|+||+++|++.....             ........
T Consensus       136 ----------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (244)
T 4e4y_A          136 ----------NSFAYTLSKGAIAQMTKSLALDLAKYQ--IRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKE  203 (244)
T ss_dssp             ----------TBHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTT
T ss_pred             ----------CCchhHHHHHHHHHHHHHHHHHHHHcC--eEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhc
Confidence                      678999999999999999999999999  99999999999999865421             11122223


Q ss_pred             HHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          251 VGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       251 ~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      .+..+..+|+|+|+.++||++ +.+.++||+.+.+||+..
T Consensus       204 ~p~~r~~~p~dvA~~v~~l~s-~~~~~itG~~i~vdGG~~  242 (244)
T 4e4y_A          204 FPLNRIAQPQEIAELVIFLLS-DKSKFMTGGLIPIDGGYT  242 (244)
T ss_dssp             STTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             CCCCCCcCHHHHHHHHHHHhc-CccccccCCeEeECCCcc
Confidence            344567899999999999998 788999999999888754

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=4.4e-40  Score=291.15  Aligned_cols=245  Identities=20%  Similarity=0.193  Sum_probs=200.6

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      ..|++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++     +.++.++.+|++|+++++++++++
T Consensus         6 ~~~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~   80 (265)
T 2o23_A            6 ACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----GNNCVFAPADVTSEKDVQTALALA   80 (265)
T ss_dssp             --CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHH
Confidence            346789999999999999999999999999999999999988887776665     457899999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCCCC--------ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccC-CCCCeEEEECCccc
Q 021391          103 NSQGRPLNILINNAGIMASPF--------MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKS-SREGRIVNVSSEAH  173 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~-~~~g~iv~isS~~~  173 (313)
                      .++++++|+||||||+.....        +.+.+++++.+++|+.+++++++++.|.|.++.... ...++||++||..+
T Consensus        81 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~  160 (265)
T 2o23_A           81 KGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAA  160 (265)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHH
T ss_pred             HHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhh
Confidence            999999999999999865422        257788999999999999999999999998731000 14689999999998


Q ss_pred             cccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHHHH
Q 021391          174 RFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCNTV  251 (313)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~~~  251 (313)
                      ..+.+               +...|++||++++.++++++.+++++|  |+||+|+||+++|++.....  ....+....
T Consensus       161 ~~~~~---------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~  223 (265)
T 2o23_A          161 FEGQV---------------GQAAYSASKGGIVGMTLPIARDLAPIG--IRVMTIAPGLFGTPLLTSLPEKVCNFLASQV  223 (265)
T ss_dssp             HHCCT---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCC----------CHHHHTC
T ss_pred             cCCCC---------------CCchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeccccCccccccCHHHHHHHHHcC
Confidence            87765               678999999999999999999999999  99999999999999876431  111222223


Q ss_pred             HH-hhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCC
Q 021391          252 GK-LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPN  292 (313)
Q Consensus       252 ~~-~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~  292 (313)
                      +. .+..+|+|+|+.++++++   ..++||+.+..+|+....
T Consensus       224 ~~~~~~~~~~dva~~~~~l~~---~~~~~G~~i~vdgG~~~~  262 (265)
T 2o23_A          224 PFPSRLGDPAEYAHLVQAIIE---NPFLNGEVIRLDGAIRMQ  262 (265)
T ss_dssp             SSSCSCBCHHHHHHHHHHHHH---CTTCCSCEEEESTTCCCC
T ss_pred             CCcCCCCCHHHHHHHHHHHhh---cCccCceEEEECCCEecC
Confidence            33 456799999999999996   368999999988776543

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=2.2e-40  Score=290.14  Aligned_cols=240  Identities=23%  Similarity=0.278  Sum_probs=188.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEE-ecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMA-VRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      |+++||++|||||++|||++++++|+++|++|+++ .|+.+..++..+++...  +.++.++.+|++|+++++++++++.
T Consensus         1 M~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   78 (247)
T 2hq1_A            1 MQLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAA--GINVVVAKGDVKNPEDVENMVKTAM   78 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHT--TCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999 67777777777776654  4578999999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          104 SQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      +.++++|+||||||+....  .+.+.+++++.+++|+.+++++++++.|.|.+.     +.++||++||.++..+.+   
T Consensus        79 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~---  150 (247)
T 2hq1_A           79 DAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQ-----KSGKIINITSIAGIIGNA---  150 (247)
T ss_dssp             HHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHH-----TCEEEEEECC-----------
T ss_pred             HhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcChhhccCCC---
Confidence            9999999999999986532  266788999999999999999999999999873     368999999998877665   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHHHHHHhhcCCh
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCNTVGKLVLKNI  259 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~  259 (313)
                                  +...|+++|++++.++++++.++++.|  |++|+|+||+++|++.....  ....+....+..+..+|
T Consensus       151 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (247)
T 2hq1_A          151 ------------GQANYAASKAGLIGFTKSIAKEFAAKG--IYCNAVAPGIIKTDMTDVLPDKVKEMYLNNIPLKRFGTP  216 (247)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHTSCHHHHHHHHTTSTTSSCBCH
T ss_pred             ------------CCcHhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEEEEEEeccchhhcchHHHHHHHhhCCCCCCCCH
Confidence                        677899999999999999999999999  99999999999998755431  11112222234456799


Q ss_pred             HHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          260 PQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       260 ~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      +|+|+.++++++ +...+++|+.+..+++.
T Consensus       217 ~dva~~~~~l~~-~~~~~~~G~~~~v~gG~  245 (247)
T 2hq1_A          217 EEVANVVGFLAS-DDSNYITGQVINIDGGL  245 (247)
T ss_dssp             HHHHHHHHHHHS-GGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHHcC-cccccccCcEEEeCCCc
Confidence            999999999997 66788999999887654

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=4.2e-40  Score=289.52  Aligned_cols=240  Identities=25%  Similarity=0.277  Sum_probs=202.0

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCce-EEEEccCCCHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKV-DAMELDVSSLASVRKFASE  101 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~-~~~~~D~s~~~~v~~~~~~  101 (313)
                      +.|+++||++|||||++|||++++++|+++|++|++++|+.+++++..+++     +.++ .++.+|++|++++++++++
T Consensus         5 ~~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~   79 (254)
T 2wsb_A            5 TVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL-----GAAVAARIVADVTDAEAMTAAAAE   79 (254)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEEECCTTCHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cccceeEEEEecCCHHHHHHHHHH
Confidence            456789999999999999999999999999999999999988877766665     2356 8899999999999999999


Q ss_pred             HhhcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccC
Q 021391          102 YNSQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSE  179 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~  179 (313)
                      +.+ ++++|+||||||+....  .+.+.+++++.+++|+.++++++++++|.|.++     ..++||++||..+..+.+.
T Consensus        80 ~~~-~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~~  153 (254)
T 2wsb_A           80 AEA-VAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVAR-----GAGAIVNLGSMSGTIVNRP  153 (254)
T ss_dssp             HHH-HSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCSS
T ss_pred             HHh-hCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEEecchhccCCCC
Confidence            988 88999999999986542  267788999999999999999999999999883     3689999999988766551


Q ss_pred             CCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----hhHhHHHHHHHhh
Q 021391          180 GIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----ILRGFCNTVGKLV  255 (313)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----~~~~~~~~~~~~~  255 (313)
                                   .+...|++||++++.++++++.+++++|  |++|+|+||++.|++.....    ....+....+..+
T Consensus       154 -------------~~~~~Y~~sK~a~~~~~~~~~~~~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  218 (254)
T 2wsb_A          154 -------------QFASSYMASKGAVHQLTRALAAEWAGRG--VRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGR  218 (254)
T ss_dssp             -------------SCBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTTSS
T ss_pred             -------------CcchHHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEEecccCchhhhccccChHHHHHHHhcCCCCC
Confidence                         0237899999999999999999999999  99999999999999765321    1122222233445


Q ss_pred             cCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          256 LKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       256 ~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      ..+|+|+|+.++++++ +...+++|+++..+|+.
T Consensus       219 ~~~~~dva~~~~~l~~-~~~~~~~G~~~~v~gG~  251 (254)
T 2wsb_A          219 CGEPSEIAAAALFLAS-PAASYVTGAILAVDGGY  251 (254)
T ss_dssp             CBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTG
T ss_pred             CCCHHHHHHHHHHHhC-cccccccCCEEEECCCE
Confidence            6799999999999997 67789999999987664

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=7e-40  Score=286.94  Aligned_cols=241  Identities=27%  Similarity=0.295  Sum_probs=205.4

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++.... +.++.++.+|++|+++++++++++.
T Consensus         2 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   80 (248)
T 2pnf_A            2 EIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKY-GVKAHGVEMNLLSEESINKAFEEIY   80 (248)
T ss_dssp             CCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhc-CCceEEEEccCCCHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999999888887777765422 4578999999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          104 SQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      +.++++|+||||||.....  .+.+.+++++.+++|+.++++++++++|.|.++     +.++||++||..+..+.+   
T Consensus        81 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~---  152 (248)
T 2pnf_A           81 NLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQ-----RWGRIVNISSVVGFTGNV---  152 (248)
T ss_dssp             HHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHH-----TCEEEEEECCHHHHHCCT---
T ss_pred             HhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-----CCcEEEEEccHHhcCCCC---
Confidence            9999999999999986542  267888999999999999999999999999873     368999999998877655   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHHHHHHhhcCCh
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCNTVGKLVLKNI  259 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~  259 (313)
                                  +...|+++|++++.++++++.++++.|  |++|+|+||+++|++.....  ....+....+..+..+|
T Consensus       153 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (248)
T 2pnf_A          153 ------------GQVNYSTTKAGLIGFTKSLAKELAPRN--VLVNAVAPGFIETDMTAVLSEEIKQKYKEQIPLGRFGSP  218 (248)
T ss_dssp             ------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCH
T ss_pred             ------------CCchHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeceecCchhhhccHHHHHHHHhcCCCCCccCH
Confidence                        567899999999999999999999988  99999999999999865432  11112222233456789


Q ss_pred             HHHHHHHHHHHccCCccCCCceeecCCcc
Q 021391          260 PQGAATTCYVALHPQVQGVSGEYFSDSNI  288 (313)
Q Consensus       260 ~eva~~~~~l~~~~~~~~~tG~~~~~~~~  288 (313)
                      +|+|+.++++++ +...+++|+.+..+++
T Consensus       219 ~dva~~~~~l~~-~~~~~~~G~~~~v~gg  246 (248)
T 2pnf_A          219 EEVANVVLFLCS-ELASYITGEVIHVNGG  246 (248)
T ss_dssp             HHHHHHHHHHHS-GGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHhC-chhhcCCCcEEEeCCC
Confidence            999999999997 6678999999887765

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=5.1e-40  Score=288.96  Aligned_cols=244  Identities=25%  Similarity=0.305  Sum_probs=207.7

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      +.+++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++...  +.++.++.+|++|+++++++++++
T Consensus         5 ~~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   82 (255)
T 1fmc_A            5 DNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFA   82 (255)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh--CCceEEEEcCCCCHHHHHHHHHHH
Confidence            356789999999999999999999999999999999999998888877777654  457889999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCC-CCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          103 NSQGRPLNILINNAGIMAS-PFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      .++++++|+||||||.... +.+.+.+++++.+++|+.+++++++++.|.|.+.     ..++||++||..+..+.+   
T Consensus        83 ~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~---  154 (255)
T 1fmc_A           83 ISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-----GGGVILTITSMAAENKNI---  154 (255)
T ss_dssp             HHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTCCCT---
T ss_pred             HHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcchhhcCCCC---
Confidence            9999999999999998654 2367788999999999999999999999999873     368999999998876655   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc---chhHhHHHHHHHhhcCC
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN---GILRGFCNTVGKLVLKN  258 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~~  258 (313)
                                  +...|+++|++++.++++++.++++.|  |++|+|+||++.|++....   .+........+..+..+
T Consensus       155 ------------~~~~Y~~sK~a~~~~~~~~~~~~~~~~--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (255)
T 1fmc_A          155 ------------NMTSYASSKAAASHLVRNMAFDLGEKN--IRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQ  220 (255)
T ss_dssp             ------------TCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBC
T ss_pred             ------------CCcccHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecccCcchhhhhccChHHHHHHHhcCCcccCCC
Confidence                        677899999999999999999999989  9999999999999875432   11122222233445679


Q ss_pred             hHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          259 IPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       259 ~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      |+|+|+.++++++ +...+++|+.+..+++...
T Consensus       221 ~~dva~~~~~l~~-~~~~~~~G~~~~v~gg~~~  252 (255)
T 1fmc_A          221 PQDIANAALFLCS-PAASWVSGQILTVSGGGVQ  252 (255)
T ss_dssp             HHHHHHHHHHHHS-GGGTTCCSCEEEESTTSCC
T ss_pred             HHHHHHHHHHHhC-CccccCCCcEEEECCceec
Confidence            9999999999997 6678899999888766543

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=6.1e-40  Score=287.82  Aligned_cols=238  Identities=25%  Similarity=0.269  Sum_probs=201.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      ++|++|||||++|||++++++|+++|++|++++|+.+..++..+++.... +.++.++.+|++|+++++++++++.++++
T Consensus         1 ~~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (250)
T 2cfc_A            1 MSRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAY-ADKVLRVRADVADEGDVNAAIAATMEQFG   79 (250)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTT-GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            36899999999999999999999999999999999888877766652221 45789999999999999999999999999


Q ss_pred             CeeEEEEcccCCCCC----C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          108 PLNILINNAGIMASP----F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       108 ~id~lv~~ag~~~~~----~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      ++|+||||||+....    . +.+.+++++.+++|+.+++++++.++|.|.+.     +.++||++||..+..+.+    
T Consensus        80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~----  150 (250)
T 2cfc_A           80 AIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQ-----GAGVIVNIASVASLVAFP----  150 (250)
T ss_dssp             CCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCT----
T ss_pred             CCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-----CCCEEEEECChhhccCCC----
Confidence            999999999976432    2 56788999999999999999999999999873     368999999999887665    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-c---hhHhHHHHHHHhhcCC
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-G---ILRGFCNTVGKLVLKN  258 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-~---~~~~~~~~~~~~~~~~  258 (313)
                                 +...|+++|++++.++++++.+++++|  |+||+|+||++.|++.... .   +...+....+..+..+
T Consensus       151 -----------~~~~Y~~sK~a~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (250)
T 2cfc_A          151 -----------GRSAYTTSKGAVLQLTKSVAVDYAGSG--IRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGT  217 (250)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTTCSCBC
T ss_pred             -----------CchhHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeCcCccCccccccCCHHHHHHHHhcCCCCCCcC
Confidence                       678999999999999999999999999  9999999999999986541 1   1111222223445679


Q ss_pred             hHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          259 IPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       259 ~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      |+|+|+.+++|++ +...++||+++..+|+.
T Consensus       218 ~~dva~~~~~l~~-~~~~~~~G~~~~v~gG~  247 (250)
T 2cfc_A          218 AAQVADAVMFLAG-EDATYVNGAALVMDGAY  247 (250)
T ss_dssp             HHHHHHHHHHHHS-TTCTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHHHcC-chhhcccCCEEEECCce
Confidence            9999999999998 67789999999987664

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=5.8e-42  Score=313.33  Aligned_cols=239  Identities=15%  Similarity=0.163  Sum_probs=196.4

Q ss_pred             CCCEEEEeCCCC--chHHHHHHHHHHcCCEEEEEecCch---------hHHHHHHHHHHhC-CCCceEEEEccCCCH--H
Q 021391           28 TGLTAIVTGASS--GIGTETARVLALRGVHVIMAVRNMA---------AGKDVREAIVKEI-PSAKVDAMELDVSSL--A   93 (313)
Q Consensus        28 ~gk~~lItGas~--giG~aia~~La~~G~~V~l~~r~~~---------~~~~~~~~l~~~~-~~~~~~~~~~D~s~~--~   93 (313)
                      ++|++|||||++  |||+++|++|+++|++|++++|+..         +++...+.+.... ....+.++.+|+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            479999999986  9999999999999999998887642         1111111111101 122478899999988  8


Q ss_pred             ------------------HHHHHHHHHhhcCCCeeEEEEcccCCC---CCC-ccCccchhhhhhhhhhHHHHHHHHHHHH
Q 021391           94 ------------------SVRKFASEYNSQGRPLNILINNAGIMA---SPF-MLSKDNIELQFATNHLGHFLLTHLLLDT  151 (313)
Q Consensus        94 ------------------~v~~~~~~~~~~~g~id~lv~~ag~~~---~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~  151 (313)
                                        +++++++++.+++|++|+||||||+..   .+. +.+.++|++++++|+.++++++++++|+
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              999999999999999999999999742   233 7889999999999999999999999999


Q ss_pred             HHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCCCCCCccc-cchHhHHHHHHHHHHHHHHhcc-CCCcEEEEEee
Q 021391          152 MKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFG-AYGQSKLANILHAKELAKHLKE-DGVNITANSLH  229 (313)
Q Consensus       152 l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~asK~a~~~l~~~la~e~~~-~g~~I~vn~i~  229 (313)
                      |.+       +|+||++||.++..+.+               ... +|++||+|+++|+++|+.|+++ +|  |+||+|+
T Consensus       161 m~~-------~g~Iv~isS~~~~~~~~---------------~~~~~Y~asKaal~~~~~~la~el~~~~g--I~vn~v~  216 (329)
T 3lt0_A          161 MKP-------QSSIISLTYHASQKVVP---------------GYGGGMSSAKAALESDTRVLAYHLGRNYN--IRINTIS  216 (329)
T ss_dssp             EEE-------EEEEEEEECGGGTSCCT---------------TCTTTHHHHHHHHHHHHHHHHHHHHHHHC--CEEEEEE
T ss_pred             Hhh-------CCeEEEEeCccccCCCC---------------cchHHHHHHHHHHHHHHHHHHHHhCCccC--eEEEEEe
Confidence            976       48999999999988776               564 8999999999999999999998 89  9999999


Q ss_pred             CcccccCCccccc-----------------------------------------------hhHhHHHHHHHhhcCChHHH
Q 021391          230 PGSIVTNLFRYNG-----------------------------------------------ILRGFCNTVGKLVLKNIPQG  262 (313)
Q Consensus       230 PG~v~t~~~~~~~-----------------------------------------------~~~~~~~~~~~~~~~~~~ev  262 (313)
                      ||+|+|++.....                                               .........+..+..+|+|+
T Consensus       217 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peev  296 (329)
T 3lt0_A          217 AGPLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDI  296 (329)
T ss_dssp             ECCCCCHHHHTCC------------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHH
T ss_pred             cceeechhHhhhhhhcccccccccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHH
Confidence            9999999865431                                               02223344566678899999


Q ss_pred             HHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          263 AATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       263 a~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      |+.++||++ +.+.++||++|.+||+...
T Consensus       297 A~~v~fL~s-~~a~~itG~~i~vdGG~~~  324 (329)
T 3lt0_A          297 GSVASFLLS-RESRAITGQTIYVDNGLNI  324 (329)
T ss_dssp             HHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHhC-chhccccCcEEEEcCCeeE
Confidence            999999998 8899999999998887654

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=9.4e-40  Score=295.10  Aligned_cols=231  Identities=22%  Similarity=0.275  Sum_probs=194.3

Q ss_pred             hhccCCC-CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHH
Q 021391           20 EVTQGID-GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKF   98 (313)
Q Consensus        20 ~~~~~~~-~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~   98 (313)
                      .+...|+ ++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|.++++++
T Consensus        21 ~m~~~m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~   98 (301)
T 3tjr_A           21 SMDGFLSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ--GFDAHGVVCDVRHLDEMVRL   98 (301)
T ss_dssp             ---CCCCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHH
T ss_pred             cchhHHhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHH
Confidence            3333344 89999999999999999999999999999999999999999988888765  56899999999999999999


Q ss_pred             HHHHhhcCCCeeEEEEcccCCCC-CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccc
Q 021391           99 ASEYNSQGRPLNILINNAGIMAS-PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFA  176 (313)
Q Consensus        99 ~~~~~~~~g~id~lv~~ag~~~~-~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~  176 (313)
                      ++++.+.+|++|+||||||+... +. +.+.+++++.+++|+.++++++++++|.|.+.    +.+++||++||.++..+
T Consensus        99 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~----~~~g~iv~isS~~~~~~  174 (301)
T 3tjr_A           99 ADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQ----GTGGHIAFTASFAGLVP  174 (301)
T ss_dssp             HHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----CSCEEEEEECCGGGTSC
T ss_pred             HHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc----CCCcEEEEeCchhhcCC
Confidence            99999999999999999998754 22 77889999999999999999999999999884    23689999999999887


Q ss_pred             ccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhH-----------
Q 021391          177 YSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILR-----------  245 (313)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~-----------  245 (313)
                      .+               +...|++||+|++.++++++.|++++|  |+||+|+||+++|++........           
T Consensus       175 ~~---------------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  237 (301)
T 3tjr_A          175 NA---------------GLGTYGVAKYGVVGLAETLAREVKPNG--IGVSVLCPMVVETKLVSNSERIRGADYGMSATPE  237 (301)
T ss_dssp             CT---------------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEECCSCCCSSHHHHHHHHC-----------
T ss_pred             CC---------------CchHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEECCccccccccccccccchhhccccChh
Confidence            76               778999999999999999999999999  99999999999999866431100           


Q ss_pred             -hHHHHHHHhhcCChHHHHHHHHHHHccC
Q 021391          246 -GFCNTVGKLVLKNIPQGAATTCYVALHP  273 (313)
Q Consensus       246 -~~~~~~~~~~~~~~~eva~~~~~l~~~~  273 (313)
                       .+..........+|+|+|+.++.++..+
T Consensus       238 ~~~~~~~~~~~~~~pedvA~~i~~~l~~~  266 (301)
T 3tjr_A          238 GAFGPLPTQDESVSADDVARLTADAILAN  266 (301)
T ss_dssp             -----------CCCHHHHHHHHHHHHHHT
T ss_pred             hhccccccccCCCCHHHHHHHHHHHHhcC
Confidence             0000111223569999999999999744

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=5.2e-40  Score=287.24  Aligned_cols=237  Identities=24%  Similarity=0.292  Sum_probs=202.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEE-ecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMA-VRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      ||++|||||++|||++++++|+++|++|+++ +|+.+..++..+++...  +.++.++.+|++|+++++++++++.++++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY--GGQAITFGGDVSKEADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--TCEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            6899999999999999999999999999995 88888888777777654  45789999999999999999999999999


Q ss_pred             CeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCC
Q 021391          108 PLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDK  185 (313)
Q Consensus       108 ~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  185 (313)
                      ++|+||||||+.....  +.+.+++++.+++|+.+++++++.+.|.|.+.     +.++||++||.++..+.+       
T Consensus        79 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~-------  146 (244)
T 1edo_A           79 TIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKK-----RKGRIINIASVVGLIGNI-------  146 (244)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCTHHHHCCT-------
T ss_pred             CCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-----CCCEEEEECChhhcCCCC-------
Confidence            9999999999875432  67889999999999999999999999999873     368999999998877665       


Q ss_pred             CCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHHHHHHhhcCChHHHH
Q 021391          186 INDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCNTVGKLVLKNIPQGA  263 (313)
Q Consensus       186 ~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~eva  263 (313)
                              +...|+++|++++.++++++.++.++|  |++|+|+||+++|++.....  .........+..+..+|+|+|
T Consensus       147 --------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  216 (244)
T 1edo_A          147 --------GQANYAAAKAGVIGFSKTAAREGASRN--INVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVA  216 (244)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTTCSCBCHHHHH
T ss_pred             --------CCccchhhHHHHHHHHHHHHHHhhhcC--CEEEEEeeCccccchhhhcChHHHHHHhhcCCCCCCCCHHHHH
Confidence                    678899999999999999999999999  99999999999998765431  111112222334567999999


Q ss_pred             HHHHHHHccCCccCCCceeecCCccc
Q 021391          264 ATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       264 ~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      +.+++++.++.+.+++|+++..+++.
T Consensus       217 ~~~~~l~~~~~~~~~~G~~~~v~gG~  242 (244)
T 1edo_A          217 GLVEFLALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             HHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred             HHHHHHhCCCccCCcCCCEEEeCCCc
Confidence            99999995578889999999887654

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=1.6e-39  Score=290.02  Aligned_cols=245  Identities=19%  Similarity=0.177  Sum_probs=206.8

Q ss_pred             hhccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHH
Q 021391           20 EVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFA   99 (313)
Q Consensus        20 ~~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~   99 (313)
                      .....|++++|++|||||++|||++++++|+++|++|++++|+.+..++..+.+...  +.++.++.+|++|++++++++
T Consensus        25 ~~~~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~  102 (279)
T 3ctm_A           25 NVLDLFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY--GVHSKAYKCNISDPKSVEETI  102 (279)
T ss_dssp             SGGGGGCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHH--CSCEEEEECCTTCHHHHHHHH
T ss_pred             ccccccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcceEEEeecCCHHHHHHHH
Confidence            345567899999999999999999999999999999999999988777776666544  457899999999999999999


Q ss_pred             HHHhhcCCCeeEEEEcccCCCC---CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccc
Q 021391          100 SEYNSQGRPLNILINNAGIMAS---PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRF  175 (313)
Q Consensus       100 ~~~~~~~g~id~lv~~ag~~~~---~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~  175 (313)
                      +++.+.++++|+||||||+...   .. +.+.+++++.+++|+.+++++++.++|.|.++     +.++||++||..+..
T Consensus       103 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~~~iv~isS~~~~~  177 (279)
T 3ctm_A          103 SQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKN-----GKGSLIITSSISGKI  177 (279)
T ss_dssp             HHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCCTTSC
T ss_pred             HHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCeEEEECchHhcc
Confidence            9999999999999999997643   12 55678899999999999999999999999873     368999999998776


Q ss_pred             c--ccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHHHH
Q 021391          176 A--YSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCNTV  251 (313)
Q Consensus       176 ~--~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~~~  251 (313)
                      +  .+               +...|++||++++.++++++.++++.|   +||+|+||+++|++.....  ....+....
T Consensus       178 ~~~~~---------------~~~~Y~~sK~a~~~~~~~la~e~~~~~---~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~  239 (279)
T 3ctm_A          178 VNIPQ---------------LQAPYNTAKAACTHLAKSLAIEWAPFA---RVNTISPGYIDTDITDFASKDMKAKWWQLT  239 (279)
T ss_dssp             C---C---------------CHHHHHHHHHHHHHHHHHHHHHTTTTC---EEEEEEECSBSSTTTSSCCHHHHHHHHHHS
T ss_pred             CCCCC---------------CcccHHHHHHHHHHHHHHHHHHhcccC---CEEEEeccCCccccccccChHHHHHHHHhC
Confidence            5  33               577899999999999999999999876   8999999999999875331  222233334


Q ss_pred             HHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          252 GKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       252 ~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      +..+..+|+|+|+.++||++ +.+.++||+.+.++|+..
T Consensus       240 p~~~~~~~~dvA~~~~~l~s-~~~~~~tG~~i~vdgG~~  277 (279)
T 3ctm_A          240 PLGREGLTQELVGGYLYLAS-NASTFTTGSDVVIDGGYT  277 (279)
T ss_dssp             TTCSCBCGGGTHHHHHHHHS-GGGTTCCSCEEEESTTCC
T ss_pred             CccCCcCHHHHHHHHHHHhC-ccccCccCCEEEECCCee
Confidence            45567899999999999998 778899999999887653

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=5.4e-40  Score=290.43  Aligned_cols=244  Identities=23%  Similarity=0.238  Sum_probs=199.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhC-----CCCceEEEEccCCCHHHHHHHH
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEI-----PSAKVDAMELDVSSLASVRKFA   99 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~~D~s~~~~v~~~~   99 (313)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++....     +..++.++.+|++|++++++++
T Consensus         3 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   82 (264)
T 2pd6_A            3 NRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLL   82 (264)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHH
Confidence            45789999999999999999999999999999999999888777666554321     1146889999999999999999


Q ss_pred             HHHhhcCCCe-eEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccc
Q 021391          100 SEYNSQGRPL-NILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFA  176 (313)
Q Consensus       100 ~~~~~~~g~i-d~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~  176 (313)
                      +++.+.++++ |+||||||..... . +.+.+++++.+++|+.+++++++++.|.|.+.    +..++||++||.++..+
T Consensus        83 ~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~----~~~g~iv~isS~~~~~~  158 (264)
T 2pd6_A           83 EQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSN----GCRGSIINISSIVGKVG  158 (264)
T ss_dssp             HHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCCEEEEEECCTHHHHC
T ss_pred             HHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc----CCCceEEEECChhhccC
Confidence            9999999998 9999999986542 2 67889999999999999999999999999873    11579999999988877


Q ss_pred             ccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHHHHHHh
Q 021391          177 YSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCNTVGKL  254 (313)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~~~  254 (313)
                      .+               +...|++||++++.++++++.+++++|  |++|+|+||++.|++.....  +...+....+..
T Consensus       159 ~~---------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~  221 (264)
T 2pd6_A          159 NV---------------GQTNYAASKAGVIGLTQTAARELGRHG--IRCNSVLPGFIATPMTQKVPQKVVDKITEMIPMG  221 (264)
T ss_dssp             CT---------------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSCC----------CTGGGCTTC
T ss_pred             CC---------------CChhhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeecccccchhhcCHHHHHHHHHhCCCC
Confidence            66               678999999999999999999999999  99999999999999865321  111111122334


Q ss_pred             hcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          255 VLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       255 ~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      +..+|+|+|+.++++++ +...+++|+.+..+|+..
T Consensus       222 ~~~~~~dva~~~~~l~~-~~~~~~~G~~~~v~gg~~  256 (264)
T 2pd6_A          222 HLGDPEDVADVVAFLAS-EDSGYITGTSVEVTGGLF  256 (264)
T ss_dssp             SCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTC-
T ss_pred             CCCCHHHHHHHHHHHcC-CcccCCCCCEEEECCCce
Confidence            56789999999999998 667899999999877654

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-39  Score=293.37  Aligned_cols=246  Identities=20%  Similarity=0.253  Sum_probs=204.9

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhC---CCCceEEEEccCCCHHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEI---PSAKVDAMELDVSSLASVRKF   98 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~---~~~~~~~~~~D~s~~~~v~~~   98 (313)
                      ....+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++....   .+.++.++.+|++|+++++++
T Consensus        11 ~~~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~   90 (303)
T 1yxm_A           11 LAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNL   90 (303)
T ss_dssp             BCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHH
T ss_pred             cCcCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHH
Confidence            34556899999999999999999999999999999999999988888888876521   245789999999999999999


Q ss_pred             HHHHhhcCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccc
Q 021391           99 ASEYNSQGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFA  176 (313)
Q Consensus        99 ~~~~~~~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~  176 (313)
                      ++++.+.+|++|+||||||..... . +.+.+++++.+++|+.+++++++++.|.+.+.     ..++||++||.+ ..+
T Consensus        91 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~~~iv~isS~~-~~~  164 (303)
T 1yxm_A           91 VKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKE-----HGGSIVNIIVPT-KAG  164 (303)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH-----HCEEEEEECCCC-TTC
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-----cCCeEEEEEeec-ccC
Confidence            999999999999999999976432 2 67888999999999999999999999976552     268999999988 555


Q ss_pred             ccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCc--ccc----chhHhHHHH
Q 021391          177 YSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLF--RYN----GILRGFCNT  250 (313)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~--~~~----~~~~~~~~~  250 (313)
                      .+               ....|+++|++++.++++++.++.++|  |+||+|+||++.|++.  ...    .........
T Consensus       165 ~~---------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~  227 (303)
T 1yxm_A          165 FP---------------LAVHSGAARAGVYNLTKSLALEWACSG--IRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQK  227 (303)
T ss_dssp             CT---------------TCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGG
T ss_pred             CC---------------cchhhHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCCcccchhhhhccccchHHHHHHHhc
Confidence            44               567899999999999999999999999  9999999999999942  211    111122222


Q ss_pred             HHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          251 VGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       251 ~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      .+..+..+|+|+|+.++||++ +...++||+++..+|+...
T Consensus       228 ~p~~~~~~~~dvA~~i~~l~~-~~~~~~~G~~~~v~gG~~~  267 (303)
T 1yxm_A          228 IPAKRIGVPEEVSSVVCFLLS-PAASFITGQSVDVDGGRSL  267 (303)
T ss_dssp             STTSSCBCTHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             CcccCCCCHHHHHHHHHHHhC-cccccCCCcEEEECCCeec
Confidence            344567899999999999997 7788999999998766543

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=4.4e-40  Score=290.11  Aligned_cols=231  Identities=16%  Similarity=0.179  Sum_probs=193.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      |++|||||++|||+++|++|+++|++|++++|+.++.+...+ +...  +.++..+     |.++++++++++.++++++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~--~~~~~~~-----d~~~v~~~~~~~~~~~g~i   73 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAET--YPQLKPM-----SEQEPAELIEAVTSAYGQV   73 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHH--CTTSEEC-----CCCSHHHHHHHHHHHHSCC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhc--CCcEEEE-----CHHHHHHHHHHHHHHhCCC
Confidence            789999999999999999999999999999999888777655 5544  3344443     6677888999999999999


Q ss_pred             eEEEEcccCC-CC-CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          110 NILINNAGIM-AS-PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       110 d~lv~~ag~~-~~-~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                      |+||||||+. .. +. +.+.++|++.+++|+.++++++++++|.|.++     +.++||++||.++..+.+        
T Consensus        74 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~--------  140 (254)
T 1zmt_A           74 DVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKR-----KSGHIIFITSATPFGPWK--------  140 (254)
T ss_dssp             CEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCSTTTSCCT--------
T ss_pred             CEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEECCcccccCCC--------
Confidence            9999999986 33 32 77889999999999999999999999999873     368999999999887766        


Q ss_pred             CCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCccc---------ccCCccccc-hhHhHHHHHHHhhc
Q 021391          187 NDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSI---------VTNLFRYNG-ILRGFCNTVGKLVL  256 (313)
Q Consensus       187 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v---------~t~~~~~~~-~~~~~~~~~~~~~~  256 (313)
                             ....|++||++++.++++++.|++++|  |+||+|+||++         +|++....+ ....+....+..+.
T Consensus       141 -------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p~~~~  211 (254)
T 1zmt_A          141 -------ELSTYTSARAGACTLANALSKELGEYN--IPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRL  211 (254)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHGGGT--CCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSC
T ss_pred             -------CchHHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCccccccccccCCCcccccChHHHHHHhccCCCCCC
Confidence                   678999999999999999999999999  99999999999         887654321 12222333444567


Q ss_pred             CChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          257 KNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       257 ~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      .+|+|+|+.++||++ +.+.++||+++.+||+...
T Consensus       212 ~~p~dvA~~v~~l~s-~~~~~~tG~~~~vdgG~~~  245 (254)
T 1zmt_A          212 GTQKELGELVAFLAS-GSCDYLTGQVFWLAGGFPM  245 (254)
T ss_dssp             BCHHHHHHHHHHHHT-TSCGGGTTCEEEESTTCCC
T ss_pred             cCHHHHHHHHHHHhC-cccCCccCCEEEECCCchh
Confidence            899999999999998 7788999999998876543

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=1e-39  Score=286.60  Aligned_cols=240  Identities=24%  Similarity=0.231  Sum_probs=202.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++..   ..++.++.+|++|+++++++++++.+
T Consensus         2 ~~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (251)
T 1zk4_A            2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT---PDQIQFFQHDSSDEDGWTKLFDATEK   78 (251)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc---cCceEEEECCCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999998877776665532   24789999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCC-CeEEEECCccccccccCCC
Q 021391          105 QGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSRE-GRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~-g~iv~isS~~~~~~~~~~~  181 (313)
                      .++++|+||||||+....  .+.+.++|++.+++|+.+++++++.++|.|.+     .+. ++||++||..+..+.+   
T Consensus        79 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-----~~~~~~iv~isS~~~~~~~~---  150 (251)
T 1zk4_A           79 AFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKN-----KGLGASIINMSSIEGFVGDP---  150 (251)
T ss_dssp             HHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT-----SSSCEEEEEECCGGGTSCCT---
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh-----cCCCCEEEEeCCchhccCCC---
Confidence            999999999999986542  26788999999999999999999999999987     333 7999999999887665   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhc--cCCCcEEEEEeeCcccccCCccccchhH---hHHHHHHHhhc
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLK--EDGVNITANSLHPGSIVTNLFRYNGILR---GFCNTVGKLVL  256 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~--~~g~~I~vn~i~PG~v~t~~~~~~~~~~---~~~~~~~~~~~  256 (313)
                                  +...|++||++++.++++++.|+.  +.|  |++|+|+||++.|++........   .+....+..+.
T Consensus       151 ------------~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  216 (251)
T 1zk4_A          151 ------------SLGAYNASKGAVRIMSKSAALDCALKDYD--VRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHI  216 (251)
T ss_dssp             ------------TCHHHHHHHHHHHHHHHHHHHHHHHTTCS--EEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSC
T ss_pred             ------------CCccchHHHHHHHHHHHHHHHHhcccCCC--eEEEEEeeCcCcchhhhhcCchhhhHHHhhcCCCCCC
Confidence                        678999999999999999999998  778  99999999999999765432110   01111233456


Q ss_pred             CChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          257 KNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       257 ~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      .+|+|+|+.++++++ +...+++|+.+..+|+..
T Consensus       217 ~~~~dva~~~~~l~~-~~~~~~~G~~~~v~gG~~  249 (251)
T 1zk4_A          217 GEPNDIAYICVYLAS-NESKFATGSEFVVDGGYT  249 (251)
T ss_dssp             BCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             cCHHHHHHHHHHHcC-cccccccCcEEEECCCcc
Confidence            789999999999998 667899999999887653

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=1.4e-39  Score=319.02  Aligned_cols=248  Identities=21%  Similarity=0.254  Sum_probs=202.5

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      ++++||++|||||++|||+++|++|+++|++|++++|+  ..+++.+++.+.  +.++..+.+|++  ++++++++++.+
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~--~~~~~~~~i~~~--g~~~~~~~~Dv~--~~~~~~~~~~~~  391 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK--DATKTVDEIKAA--GGEAWPDQHDVA--KDSEAIIKNVID  391 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSS--CCHHHHHHHHHT--TCEEEEECCCHH--HHHHHHHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCc--cHHHHHHHHHhc--CCeEEEEEcChH--HHHHHHHHHHHH
Confidence            57899999999999999999999999999999999874  245556666554  456778888884  456788999999


Q ss_pred             cCCCeeEEEEcccCCCC-CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          105 QGRPLNILINNAGIMAS-PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~-~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      ++|+||+||||||+... ++ +.+.++|++.+++|+.|+++++|+++|+|.+     +++|+||++||.++..+.+    
T Consensus       392 ~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~-----~~~G~IVnisS~ag~~~~~----  462 (604)
T 2et6_A          392 KYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVE-----KQFGRIINITSTSGIYGNF----  462 (604)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-----TTCEEEEEECCHHHHSCCT----
T ss_pred             hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-----cCCCEEEEECChhhccCCC----
Confidence            99999999999998654 33 7889999999999999999999999999988     4479999999999988776    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHH
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQG  262 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~ev  262 (313)
                                 ++..|++||+|+.+|+++|+.|++++|  ||||+|+||. +|+|..... ..    .  .....+|+|+
T Consensus       463 -----------~~~~Y~asKaal~~lt~~la~El~~~g--IrVn~v~PG~-~T~m~~~~~-~~----~--~~~~~~pe~v  521 (604)
T 2et6_A          463 -----------GQANYSSSKAGILGLSKTMAIEGAKNN--IKVNIVAPHA-ETAMTLSIM-RE----Q--DKNLYHADQV  521 (604)
T ss_dssp             -----------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECC-CCCC----------------CCSSCGGGT
T ss_pred             -----------CChhHHHHHHHHHHHHHHHHHHhCccC--eEEEEEcCCC-CCccccccC-ch----h--hccCCCHHHH
Confidence                       678999999999999999999999999  9999999995 999865321 00    0  1224589999


Q ss_pred             HHHHHHHHccCCccCCCceeecCCcccCC------------CccCCCHHHHHHHHHHHHh
Q 021391          263 AATTCYVALHPQVQGVSGEYFSDSNIYKP------------NSQGQNMELAKKLWDFSMN  310 (313)
Q Consensus       263 a~~~~~l~~~~~~~~~tG~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~  310 (313)
                      |+.++||++ +.+. +||+++.+||+...            .+...+++...+.|+...+
T Consensus       522 A~~v~~L~s-~~~~-itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  579 (604)
T 2et6_A          522 APLLVYLGT-DDVP-VTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITD  579 (604)
T ss_dssp             HHHHHHTTS-TTCC-CCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTC
T ss_pred             HHHHHHHhC-CccC-CCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhc
Confidence            999999998 7777 99999998765322            2334578877888887654

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=5.2e-40  Score=285.34  Aligned_cols=224  Identities=17%  Similarity=0.160  Sum_probs=182.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      |++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|+++.++++++++++.+.   .
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~---~   73 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL-----SNNVGYRARDLASHQEVEQLFEQLDSI---P   73 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC-----SSCCCEEECCTTCHHHHHHHHHSCSSC---C
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-----hhccCeEeecCCCHHHHHHHHHHHhhc---C
Confidence            78999999999999999999999999999999988877766554     457889999999999999999877544   3


Q ss_pred             eEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCC
Q 021391          110 NILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIN  187 (313)
Q Consensus       110 d~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  187 (313)
                      |+||||||+.....  +.+.++|++.+++|+.++++++++++|.|.++      +++||++||..+..+.+         
T Consensus        74 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------~~~iv~isS~~~~~~~~---------  138 (230)
T 3guy_A           74 STVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQ------PVNVVMIMSTAAQQPKA---------  138 (230)
T ss_dssp             SEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS------CCEEEEECCGGGTSCCT---------
T ss_pred             CEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC------CCeEEEEeecccCCCCC---------
Confidence            99999999875432  77889999999999999999999999999772      45999999999987766         


Q ss_pred             CCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHHHHHHH
Q 021391          188 DESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGAATTC  267 (313)
Q Consensus       188 ~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~eva~~~~  267 (313)
                            +...|++||+|++.|+++++.|++++|  |+||+|+||+++|++.....      ...+..+..+|+|+|+.++
T Consensus       139 ------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~------~~~~~~~~~~~~dvA~~i~  204 (230)
T 3guy_A          139 ------QESTYCAVKWAVKGLIESVRLELKGKP--MKIIAVYPGGMATEFWETSG------KSLDTSSFMSAEDAALMIH  204 (230)
T ss_dssp             ------TCHHHHHHHHHHHHHHHHHHHHTTTSS--CEEEEEEECCC----------------------CCCHHHHHHHHH
T ss_pred             ------CCchhHHHHHHHHHHHHHHHHHHHhcC--eEEEEEECCcccChHHHhcC------CCCCcccCCCHHHHHHHHH
Confidence                  678999999999999999999999999  99999999999999876432      2234566789999999999


Q ss_pred             HHHccCCccCCCceeecCCcccC
Q 021391          268 YVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       268 ~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      |+++++...++||+.+.++....
T Consensus       205 ~l~~~~~~~~itg~~~~~~~~~~  227 (230)
T 3guy_A          205 GALANIGNGYVSDITVNREGHHH  227 (230)
T ss_dssp             HHCCEETTEEEEEEEEEC-----
T ss_pred             HHHhCcCCCCccceeecCCCCCC
Confidence            99988899999999998775443

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=5.4e-39  Score=292.40  Aligned_cols=241  Identities=23%  Similarity=0.208  Sum_probs=193.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      +++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++....++.++.++.+|++|+++++++++++.
T Consensus         3 m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   82 (319)
T 3ioy_A            3 LKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVE   82 (319)
T ss_dssp             CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999999999998888876545589999999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCC-CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhc-cCCCCCeEEEECCccccccccCC
Q 021391          104 SQGRPLNILINNAGIMAS-PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQ-KSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~-~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      +.++++|+||||||+... +. +.+.+++++.+++|+.|+++++++++|.|.+... ...+.|+||++||.++..+.+  
T Consensus        83 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~--  160 (319)
T 3ioy_A           83 ARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAG--  160 (319)
T ss_dssp             HHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCS--
T ss_pred             HhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCC--
Confidence            999999999999998654 22 7788999999999999999999999999987411 112478999999999988776  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHH------------
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFC------------  248 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~------------  248 (313)
                                   ....|++||+|+++|+++++.|+.+.|  |+||+|+||+|+|++...........            
T Consensus       161 -------------~~~~Y~aSKaal~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  225 (319)
T 3ioy_A          161 -------------SPGIYNTTKFAVRGLSESLHYSLLKYE--IGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAV  225 (319)
T ss_dssp             -------------SSHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEECCCCBC--------------------------
T ss_pred             -------------CCHHHHHHHHHHHHHHHHHHHHhhhcC--CEEEEEEcCeEccCcccccccCchhhcccccchhHHHH
Confidence                         678999999999999999999999999  99999999999999876432111110            


Q ss_pred             HHHHH--hhcCChHHHHHHHHHHHccCCccCCCce
Q 021391          249 NTVGK--LVLKNIPQGAATTCYVALHPQVQGVSGE  281 (313)
Q Consensus       249 ~~~~~--~~~~~~~eva~~~~~l~~~~~~~~~tG~  281 (313)
                      .....  ....+|+++|+.++..+..+....+++.
T Consensus       226 ~~~~~~~~~~~~pe~vA~~~~~al~~~~~~i~~~~  260 (319)
T 3ioy_A          226 ERLAGVHEFGMEPDVIGARVIEAMKANRLHIFSHP  260 (319)
T ss_dssp             ---CCGGGSSBCHHHHHHHHHHHHHTTCSEECCCS
T ss_pred             HHHHHhhhcCCCHHHHHHHHHHHHHcCCCEEEcCH
Confidence            00000  1126899999999999985543333333

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=1.4e-39  Score=301.83  Aligned_cols=254  Identities=15%  Similarity=0.082  Sum_probs=205.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHH-cCCEEEEEecCchhHHH------------HHHHHHHhCCCCceEEEEccCCCHH
Q 021391           27 GTGLTAIVTGASSGIGTETARVLAL-RGVHVIMAVRNMAAGKD------------VREAIVKEIPSAKVDAMELDVSSLA   93 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~-~G~~V~l~~r~~~~~~~------------~~~~l~~~~~~~~~~~~~~D~s~~~   93 (313)
                      -.||++|||||++|||+++|+.|++ +|++|++++|+.+..++            ..+.+...  +.++..+.+|+++++
T Consensus        59 ~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~--G~~a~~i~~Dvtd~~  136 (422)
T 3s8m_A           59 DGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAA--GLYSKSINGDAFSDA  136 (422)
T ss_dssp             SSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTTSHH
T ss_pred             cCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhc--CCcEEEEEecCCCHH
Confidence            3589999999999999999999999 99999999998654332            22344443  567889999999999


Q ss_pred             HHHHHHHHHhhcC-CCeeEEEEcccCC-------------C-CCC----------------------ccCccchhhhhhh
Q 021391           94 SVRKFASEYNSQG-RPLNILINNAGIM-------------A-SPF----------------------MLSKDNIELQFAT  136 (313)
Q Consensus        94 ~v~~~~~~~~~~~-g~id~lv~~ag~~-------------~-~~~----------------------~~~~~~~~~~~~~  136 (313)
                      +++++++++.+++ |+||+||||||+.             . .+.                      +.+.++|++++++
T Consensus       137 ~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~V  216 (422)
T 3s8m_A          137 ARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITV  216 (422)
T ss_dssp             HHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHh
Confidence            9999999999999 9999999999872             1 121                      3578899999999


Q ss_pred             hhhHHH-HHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCCCCCCcc--ccchHhHHHHHHHHHHHH
Q 021391          137 NHLGHF-LLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSF--GAYGQSKLANILHAKELA  213 (313)
Q Consensus       137 n~~~~~-~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~asK~a~~~l~~~la  213 (313)
                      |..+.| .+++++.+.+..     .++|+||++||+++..+.|               .+  .+|++||+|+++|+|+||
T Consensus       217 n~~~~~~~~~~a~~~~~m~-----~~gG~IVniSSi~g~~~~p---------------~~~~~aY~ASKaAl~~lTrsLA  276 (422)
T 3s8m_A          217 MGGQDWELWIDALEGAGVL-----ADGARSVAFSYIGTEITWP---------------IYWHGALGKAKVDLDRTAQRLN  276 (422)
T ss_dssp             HSSHHHHHHHHHHHHTTCE-----EEEEEEEEEEECCCGGGHH---------------HHTSHHHHHHHHHHHHHHHHHH
T ss_pred             hchhHHHHHHHHHHHHHHh-----hCCCEEEEEeCchhhccCC---------------CccchHHHHHHHHHHHHHHHHH
Confidence            999998 788887765333     2268999999999988766               55  899999999999999999


Q ss_pred             HHhccCCCcEEEEEeeCcccccCCccccchhHhHH--HHHHHhhcCChHHHHHHHHHHHccCCccCCC-ceee--cCCcc
Q 021391          214 KHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFC--NTVGKLVLKNIPQGAATTCYVALHPQVQGVS-GEYF--SDSNI  288 (313)
Q Consensus       214 ~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~--~~~~~~~~~~~~eva~~~~~l~~~~~~~~~t-G~~~--~~~~~  288 (313)
                      .|++++|  ||||+|+||+++|++....+....+.  ...+.++..+|||+|+.+.||++ +. -|.+ |+..  +..+.
T Consensus       277 ~Ela~~G--IRVNaVaPG~i~T~~~~~ip~~~~~~~~~~~~m~r~G~pEdva~~v~~L~s-d~-ly~~~~~~~~~d~~~~  352 (422)
T 3s8m_A          277 ARLAKHG--GGANVAVLKSVVTQASAAIPVMPLYISMVYKIMKEKGLHEGTIEQLDRLFR-ER-LYRQDGQPAEVDEQNR  352 (422)
T ss_dssp             HHHHTTT--CEEEEEEECCCCCTTGGGSTHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHH-HT-TTCTTCCCCCCCTTSC
T ss_pred             HHhCccC--EEEEEEEcCCCcChhhhcCCCChHHHHHHHhhhcCCcChHHHHHHHHHHhc-ch-hhccCCCCcccCCCCC
Confidence            9999999  99999999999999987653332221  12367788999999999999998 43 3665 5544  34577


Q ss_pred             cCCCccCCCHHHHH---HHHH
Q 021391          289 YKPNSQGQNMELAK---KLWD  306 (313)
Q Consensus       289 ~~~~~~~~~~~~~~---~~~~  306 (313)
                      .+.-++..+++.|.   ++|+
T Consensus       353 ~r~d~~e~~~~~q~~~~~~~~  373 (422)
T 3s8m_A          353 LRLDDWELRDDVQDACKALWP  373 (422)
T ss_dssp             EESCTTTTSHHHHHHHHHHGG
T ss_pred             CccchhhCCHHHHHHHHHHHH
Confidence            78888899999885   4554

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=7.9e-39  Score=279.85  Aligned_cols=234  Identities=20%  Similarity=0.281  Sum_probs=194.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      +|+++||++|||||++|||++++++|+++|++|++++|+.++.++..+++    +  ...++.+|++|+++++++++   
T Consensus         2 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~--~~~~~~~D~~~~~~~~~~~~---   72 (244)
T 3d3w_A            2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC----P--GIEPVCVDLGDWEATERALG---   72 (244)
T ss_dssp             CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----T--TCEEEECCTTCHHHHHHHHT---
T ss_pred             ccccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----C--CCCEEEEeCCCHHHHHHHHH---
Confidence            46789999999999999999999999999999999999987766554432    2  35677999999999888876   


Q ss_pred             hcCCCeeEEEEcccCCCC-CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          104 SQGRPLNILINNAGIMAS-PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~-~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                       .++++|+||||||.... +. +.+.+++++.+++|+.+++++++++.|.|.++    ...++||++||..+..+.+   
T Consensus        73 -~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~----~~~~~iv~~sS~~~~~~~~---  144 (244)
T 3d3w_A           73 -SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIAR----GVPGAIVNVSSQCSQRAVT---  144 (244)
T ss_dssp             -TCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCCEEEEEECCGGGTSCCT---
T ss_pred             -HcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC----CCCcEEEEeCchhhccCCC---
Confidence             56889999999997653 22 67788999999999999999999999999873    1258999999998877655   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----chhHhHHHHHHHhhcC
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----GILRGFCNTVGKLVLK  257 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~  257 (313)
                                  +...|++||++++.++++++.|++++|  |+||+|+||++.|++....    .....+....+..+..
T Consensus       145 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (244)
T 3d3w_A          145 ------------NHSVYCSTKGALDMLTKVMALELGPHK--IRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFA  210 (244)
T ss_dssp             ------------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCTTCSCB
T ss_pred             ------------CCchHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeccccccchhhhccChHHHHHHHhhCCCCCCc
Confidence                        678899999999999999999999999  9999999999999986521    1112233333445677


Q ss_pred             ChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          258 NIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       258 ~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      +|+|+|+.++++++ +.+.+++|+++..+++.
T Consensus       211 ~~~dva~~~~~l~~-~~~~~~~G~~~~v~gG~  241 (244)
T 3d3w_A          211 EVEHVVNAILFLLS-DRSGMTTGSTLPVEGGF  241 (244)
T ss_dssp             CHHHHHHHHHHHHS-GGGTTCCSCEEEESTTG
T ss_pred             CHHHHHHHHHHHcC-ccccCCCCCEEEECCCc
Confidence            99999999999997 66788999999877664

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=8.1e-39  Score=279.80  Aligned_cols=232  Identities=21%  Similarity=0.254  Sum_probs=202.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-------EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHH
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGV-------HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFAS  100 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~-------~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~  100 (313)
                      ++|++|||||++|||++++++|+++|+       +|++++|+.+..+...+++...  +.++.++.+|++|+++++++++
T Consensus         1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~   78 (244)
T 2bd0_A            1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDTITADISDMADVRRLTT   78 (244)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT--TCEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHcc--CCeeeEEEecCCCHHHHHHHHH
Confidence            378999999999999999999999999       9999999988888777777543  4578999999999999999999


Q ss_pred             HHhhcCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccccc
Q 021391          101 EYNSQGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYS  178 (313)
Q Consensus       101 ~~~~~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~  178 (313)
                      ++.++++++|+||||||+.... . +.+.+++++.+++|+.+++++++.+.|.|.+.     ..++||++||.++..+.+
T Consensus        79 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~  153 (244)
T 2bd0_A           79 HIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQ-----HSGHIFFITSVAATKAFR  153 (244)
T ss_dssp             HHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCT
T ss_pred             HHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-----CCCEEEEEecchhcCCCC
Confidence            9999999999999999986542 2 67889999999999999999999999999873     368999999999887655


Q ss_pred             CCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCC
Q 021391          179 EGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKN  258 (313)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  258 (313)
                                     +...|++||++++.++++++.++.++|  |+||+|+||++.|++........       ..+..+
T Consensus       154 ---------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~-------~~~~~~  209 (244)
T 2bd0_A          154 ---------------HSSIYCMSKFGQRGLVETMRLYARKCN--VRITDVQPGAVYTPMWGKVDDEM-------QALMMM  209 (244)
T ss_dssp             ---------------TCHHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCBCSTTTCCCCSTT-------GGGSBC
T ss_pred             ---------------CCchhHHHHHHHHHHHHHHHHHhhccC--cEEEEEECCCccchhhhhccccc-------cccCCC
Confidence                           678899999999999999999999999  99999999999999876532111       235689


Q ss_pred             hHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          259 IPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       259 ~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      |+|+|+.++++++ +...+++|+++..++...+
T Consensus       210 ~~dva~~~~~l~~-~~~~~~~g~~~~~~~~~~~  241 (244)
T 2bd0_A          210 PEDIAAPVVQAYL-QPSRTVVEEIILRPTSGDI  241 (244)
T ss_dssp             HHHHHHHHHHHHT-SCTTEEEEEEEEEETTCCC
T ss_pred             HHHHHHHHHHHHh-CCccccchheEEecccccc
Confidence            9999999999998 7788999998887776554

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=6.6e-41  Score=304.50  Aligned_cols=246  Identities=18%  Similarity=0.149  Sum_probs=190.7

Q ss_pred             ccCCCCCCCEEEEeCC--CCchHHHHHHHHHHcCCEEEEEecCchh------HH-HHHHHHHHhCCCC---ceEEEEcc-
Q 021391           22 TQGIDGTGLTAIVTGA--SSGIGTETARVLALRGVHVIMAVRNMAA------GK-DVREAIVKEIPSA---KVDAMELD-   88 (313)
Q Consensus        22 ~~~~~~~gk~~lItGa--s~giG~aia~~La~~G~~V~l~~r~~~~------~~-~~~~~l~~~~~~~---~~~~~~~D-   88 (313)
                      ++.|+++||++|||||  ++|||+++|++|+++|++|++++|+...      .. ...+++.....+.   ...++.+| 
T Consensus         2 M~~~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~   81 (315)
T 2o2s_A            2 AFPIDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDA   81 (315)
T ss_dssp             --CCCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCT
T ss_pred             CCcccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccc
Confidence            3567799999999999  8999999999999999999999986410      00 0011111110011   12344444 


Q ss_pred             -----------CC--------CHHHHHHHHHHHhhcCCCeeEEEEcccCCC---CCC-ccCccchhhhhhhhhhHHHHHH
Q 021391           89 -----------VS--------SLASVRKFASEYNSQGRPLNILINNAGIMA---SPF-MLSKDNIELQFATNHLGHFLLT  145 (313)
Q Consensus        89 -----------~s--------~~~~v~~~~~~~~~~~g~id~lv~~ag~~~---~~~-~~~~~~~~~~~~~n~~~~~~l~  145 (313)
                                 ++        |+++++++++++.+++|++|+||||||+..   .+. +.+.++|++.+++|+.++++++
T Consensus        82 ~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  161 (315)
T 2o2s_A           82 AFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLL  161 (315)
T ss_dssp             TCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             cccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHH
Confidence                       33        366899999999999999999999999753   233 7788999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCCCCCCcc-ccchHhHHHHHHHHHHHHHHhcc-CCCcE
Q 021391          146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSF-GAYGQSKLANILHAKELAKHLKE-DGVNI  223 (313)
Q Consensus       146 ~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~asK~a~~~l~~~la~e~~~-~g~~I  223 (313)
                      ++++|+|.+       +|+||++||.++..+.+               ++ ..|++||+|++.|+++++.|+++ +|  |
T Consensus       162 ~~~~~~m~~-------~g~Iv~isS~~~~~~~~---------------~~~~~Y~asKaal~~l~~~la~el~~~~g--I  217 (315)
T 2o2s_A          162 QHFGPIMNE-------GGSAVTLSYLAAERVVP---------------GYGGGMSSAKAALESDTRTLAWEAGQKYG--V  217 (315)
T ss_dssp             HHHSTTEEE-------EEEEEEEEEGGGTSCCT---------------TCCTTHHHHHHHHHHHHHHHHHHHHHHTC--C
T ss_pred             HHHHHHHhc-------CCEEEEEecccccccCC---------------CccHHHHHHHHHHHHHHHHHHHHhCcccC--e
Confidence            999999865       48999999999887655               44 48999999999999999999985 88  9


Q ss_pred             EEEEeeCcccccCCccccc------hhHh----HHHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCC
Q 021391          224 TANSLHPGSIVTNLFRYNG------ILRG----FCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPN  292 (313)
Q Consensus       224 ~vn~i~PG~v~t~~~~~~~------~~~~----~~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~  292 (313)
                      |||+|+||+++|++.....      +...    +....+..+..+|+|+|+.++||++ +.+.++||+++.+||+....
T Consensus       218 rvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s-~~~~~itG~~i~vdGG~~~~  295 (315)
T 2o2s_A          218 RVNAISAGPLKSRAASAIGKSGEKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLS-PLARAVSGVTLYVDNGLHAM  295 (315)
T ss_dssp             EEEEEEECCCCCHHHHHTTCSSSSCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTGGGC
T ss_pred             EEEEEecccccchhhhhccccccchhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhC-chhccCcCCEEEECCCeeee
Confidence            9999999999998754321      1111    1223455667899999999999998 88899999999988776543

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=2.5e-39  Score=307.30  Aligned_cols=240  Identities=26%  Similarity=0.273  Sum_probs=196.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      ...++||++|||||++|||+++|++|+++|++|++++|+... ++. +++..+   ..+.++.+|++|.++++++++++.
T Consensus       208 ~~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l-~~~~~~---~~~~~~~~Dvtd~~~v~~~~~~~~  282 (454)
T 3u0b_A          208 DKPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDL-KRVADK---VGGTALTLDVTADDAVDKITAHVT  282 (454)
T ss_dssp             TSTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHH-HHHHHH---HTCEEEECCTTSTTHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHH-HHHHHH---cCCeEEEEecCCHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999987432 222 222221   135689999999999999999999


Q ss_pred             hcCCC-eeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          104 SQGRP-LNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       104 ~~~g~-id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      +++++ ||+||||||+.....  +.+.++|++.+++|+.+++++.+++.|.|.+     +..++||++||.++..+.+  
T Consensus       283 ~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~-----~~~g~iV~iSS~a~~~g~~--  355 (454)
T 3u0b_A          283 EHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTI-----GEGGRVIGLSSMAGIAGNR--  355 (454)
T ss_dssp             HHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSS-----CTTCEEEEECCHHHHHCCT--
T ss_pred             HHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhh-----cCCCEEEEEeChHhCCCCC--
Confidence            99986 999999999876543  7899999999999999999999999999876     4578999999999998877  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchh-Hh-HHHHHHHhhcCC
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGIL-RG-FCNTVGKLVLKN  258 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~-~~-~~~~~~~~~~~~  258 (313)
                                   ++..|+++|+++++|+++++.|++++|  |+||+|+||+++|++....... .. .....+..+..+
T Consensus       356 -------------g~~~YaasKaal~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~l~r~g~  420 (454)
T 3u0b_A          356 -------------GQTNYATTKAGMIGLAEALAPVLADKG--ITINAVAPGFIETKMTEAIPLATREVGRRLNSLFQGGQ  420 (454)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECSBCC----------CHHHHHSBTTSSCBC
T ss_pred             -------------CCHHHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEEcCcccChhhhhcchhhHHHHHhhccccCCCC
Confidence                         788999999999999999999999999  9999999999999997654211 11 112223445678


Q ss_pred             hHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          259 IPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       259 ~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      |+|+|+.++||++ +.+.++||++|.+||+...
T Consensus       421 pedvA~~v~fL~s-~~a~~itG~~i~vdGG~~l  452 (454)
T 3u0b_A          421 PVDVAELIAYFAS-PASNAVTGNTIRVCGQAML  452 (454)
T ss_dssp             HHHHHHHHHHHHC-GGGTTCCSCEEEESSSBSC
T ss_pred             HHHHHHHHHHHhC-CccCCCCCcEEEECCcccc
Confidence            9999999999998 8899999999999887653

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=6.6e-39  Score=284.46  Aligned_cols=235  Identities=24%  Similarity=0.271  Sum_probs=195.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      ++||++|||||++|||++++++|+++|++|++++|+.+..++..+++.....+.++.++.+|++|+++++++++++.+++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            68999999999999999999999999999999999988887777776544334578999999999999999999999999


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                      |++|+||||||+.      +.++|++.+++|+.+++.+++.++|.|.++.  ....++||++||.++..+.+        
T Consensus        85 g~id~lv~~Ag~~------~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~~g~iv~isS~~~~~~~~--------  148 (267)
T 2gdz_A           85 GRLDILVNNAGVN------NEKNWEKTLQINLVSVISGTYLGLDYMSKQN--GGEGGIIINMSSLAGLMPVA--------  148 (267)
T ss_dssp             SCCCEEEECCCCC------CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGG--TCCCEEEEEECCGGGTSCCT--------
T ss_pred             CCCCEEEECCCCC------ChhhHHHHHhHHHHHHHHHHHHHHHHHHhcc--CCCCCEEEEeCCccccCCCC--------
Confidence            9999999999975      3578999999999999999999999997631  01258999999999887655        


Q ss_pred             CCCCCCCccccchHhHHHHHHHHHHH--HHHhccCCCcEEEEEeeCcccccCCccccch----------hHhHHHHHHHh
Q 021391          187 NDESAYNSFGAYGQSKLANILHAKEL--AKHLKEDGVNITANSLHPGSIVTNLFRYNGI----------LRGFCNTVGKL  254 (313)
Q Consensus       187 ~~~~~~~~~~~Y~asK~a~~~l~~~l--a~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~----------~~~~~~~~~~~  254 (313)
                             +...|++||++++.+++++  +.++++.|  ||||+|+||+++|++......          ........+..
T Consensus       149 -------~~~~Y~~sK~a~~~~~~~~ala~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (267)
T 2gdz_A          149 -------QQPVYCASKHGIVGFTRSAALAANLMNSG--VRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYY  219 (267)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHHHHTCC--EEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHH
T ss_pred             -------CCchHHHHHHHHHHHHHHHHHHHHhccCC--cEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccc
Confidence                   6778999999999999995  68899999  999999999999987543210          01111122333


Q ss_pred             hcCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          255 VLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       255 ~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      ...+|+|+|+.+++|++ +.  ++||+.+.+++..
T Consensus       220 ~~~~~~dvA~~v~~l~s-~~--~~~G~~~~v~gg~  251 (267)
T 2gdz_A          220 GILDPPLIANGLITLIE-DD--ALNGAIMKITTSK  251 (267)
T ss_dssp             CCBCHHHHHHHHHHHHH-CT--TCSSCEEEEETTT
T ss_pred             cCCCHHHHHHHHHHHhc-Cc--CCCCcEEEecCCC
Confidence            45699999999999998 43  4999998876544

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=1.4e-38  Score=283.41  Aligned_cols=245  Identities=22%  Similarity=0.241  Sum_probs=202.8

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      ...+++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++..   ..++.++.+|++|++++++++++
T Consensus         9 ~~~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~   85 (278)
T 2bgk_A            9 SSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS---PDVISFVHCDVTKDEDVRNLVDT   85 (278)
T ss_dssp             --CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC---CCceEEEECCCCCHHHHHHHHHH
Confidence            345678999999999999999999999999999999999998777666555521   23789999999999999999999


Q ss_pred             HhhcCCCeeEEEEcccCCCC---C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccc
Q 021391          102 YNSQGRPLNILINNAGIMAS---P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAY  177 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~~~---~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~  177 (313)
                      +.++++++|+||||||+...   + .+.+.+++++.+++|+.+++++++++.|.|.+     ++.++||++||..+..+.
T Consensus        86 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~~iv~isS~~~~~~~  160 (278)
T 2bgk_A           86 TIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIP-----AKKGSIVFTASISSFTAG  160 (278)
T ss_dssp             HHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGG-----GTCEEEEEECCGGGTCCC
T ss_pred             HHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhh-----cCCCeEEEEeeccccCCC
Confidence            99999999999999997642   2 26778999999999999999999999999987     347899999999887654


Q ss_pred             cCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc-----hhHhHHHHH-
Q 021391          178 SEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG-----ILRGFCNTV-  251 (313)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~-----~~~~~~~~~-  251 (313)
                      +.              +...|++||++++.++++++.|++++|  |++|+|+||++.|++.....     ....+.... 
T Consensus       161 ~~--------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  224 (278)
T 2bgk_A          161 EG--------------VSHVYTATKHAVLGLTTSLCTELGEYG--IRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAA  224 (278)
T ss_dssp             TT--------------SCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTC
T ss_pred             CC--------------CCcchHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeceecchhhhhhcccchhHHHHhhhccc
Confidence            31              356899999999999999999999999  99999999999999866431     111111111 


Q ss_pred             -HHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          252 -GKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       252 -~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                       +..+..+|+|+|++++++++ +...+++|+++..+++...
T Consensus       225 ~~~~~~~~~~dva~~~~~l~~-~~~~~~~G~~~~v~gg~~~  264 (278)
T 2bgk_A          225 NLKGTLLRAEDVADAVAYLAG-DESKYVSGLNLVIDGGYTR  264 (278)
T ss_dssp             SSCSCCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             ccccccCCHHHHHHHHHHHcC-cccccCCCCEEEECCcccc
Confidence             12346799999999999997 6778999999998876544

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=3.4e-39  Score=284.07  Aligned_cols=244  Identities=19%  Similarity=0.245  Sum_probs=203.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecC-chhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRN-MAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      +++||++|||||++|||++++++|+++|++|++++|+ .+..++..+++...  +.++.++.+|++|+++++++++++.+
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRAD--GGDAAFFAADLATSEACQQLVDEFVA   81 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999 78888877777654  45789999999999999999999999


Q ss_pred             cCCCeeEEEEcccC-CCC-CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccc-cccCC
Q 021391          105 QGRPLNILINNAGI-MAS-PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRF-AYSEG  180 (313)
Q Consensus       105 ~~g~id~lv~~ag~-~~~-~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~-~~~~~  180 (313)
                      +++++|+||||||. ... +. +.+.+++++.+++|+.++++++++++|.|.+........++||++||..+.. +.+  
T Consensus        82 ~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--  159 (258)
T 3afn_B           82 KFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGP--  159 (258)
T ss_dssp             HHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCT--
T ss_pred             HcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCC--
Confidence            99999999999997 332 22 6778889999999999999999999999986421011237999999998876 544  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHHHHHHhhcCC
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCNTVGKLVLKN  258 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~  258 (313)
                                   +...|++||++++.+++.++.+++++|  |+||+|+||++.|++.....  +...+....+..+..+
T Consensus       160 -------------~~~~Y~~sK~a~~~~~~~~~~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  224 (258)
T 3afn_B          160 -------------GAGLYGAAKAFLHNVHKNWVDFHTKDG--VRFNIVSPGTVDTAFHADKTQDVRDRISNGIPMGRFGT  224 (258)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBSSGGGTTCCHHHHHHHHTTCTTCSCBC
T ss_pred             -------------CchHHHHHHHHHHHHHHHHHHhhcccC--eEEEEEeCCCcccccccccCHHHHHHHhccCCCCcCCC
Confidence                         677899999999999999999999999  99999999999999876431  1122222223445679


Q ss_pred             hHHHHHHHHHHHccCCcc-CCCceeecCCccc
Q 021391          259 IPQGAATTCYVALHPQVQ-GVSGEYFSDSNIY  289 (313)
Q Consensus       259 ~~eva~~~~~l~~~~~~~-~~tG~~~~~~~~~  289 (313)
                      |+|+|+.++++++ +... +++|+++..+++.
T Consensus       225 ~~dva~~~~~l~~-~~~~~~~~G~~~~v~gg~  255 (258)
T 3afn_B          225 AEEMAPAFLFFAS-HLASGYITGQVLDINGGQ  255 (258)
T ss_dssp             GGGTHHHHHHHHC-HHHHTTCCSEEEEESTTS
T ss_pred             HHHHHHHHHHHhC-cchhccccCCEEeECCCc
Confidence            9999999999998 5556 8999999877654

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=3.1e-39  Score=316.48  Aligned_cols=248  Identities=22%  Similarity=0.240  Sum_probs=202.2

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc---------hhHHHHHHHHHHhCCCCceEEEEccCCCHHH
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM---------AAGKDVREAIVKEIPSAKVDAMELDVSSLAS   94 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~---------~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~   94 (313)
                      .++++||++|||||++|||+++|++|+++|++|++++|+.         +.++++.+++...  +.+.   .+|++|.++
T Consensus         3 ~~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~--g~~~---~~d~~d~~~   77 (604)
T 2et6_A            3 PVDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKN--GGVA---VADYNNVLD   77 (604)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHT--TCEE---EEECCCTTC
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhc--CCeE---EEEcCCHHH
Confidence            4678999999999999999999999999999999998765         6677777777654  2332   368888888


Q ss_pred             HHHHHHHHhhcCCCeeEEEEcccCCCC-CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391           95 VRKFASEYNSQGRPLNILINNAGIMAS-PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus        95 v~~~~~~~~~~~g~id~lv~~ag~~~~-~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                      ++++++++.+++|+||+||||||+... +. +.+.++|++.+++|+.|+++++|+++|+|+++     +.|+||++||.+
T Consensus        78 ~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~-----~~G~IVnisS~a  152 (604)
T 2et6_A           78 GDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQ-----KYGRIVNTSSPA  152 (604)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHH
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEECCHH
Confidence            999999999999999999999998654 33 78899999999999999999999999999883     368999999999


Q ss_pred             ccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHH
Q 021391          173 HRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVG  252 (313)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~  252 (313)
                      +..+.+               ++..|++||+|+.+|+++|+.|++++|  ||||+|+|| ++|++..... ...      
T Consensus       153 g~~~~~---------------~~~~Y~asKaal~~lt~~la~El~~~g--IrVn~v~Pg-~~T~m~~~~~-~~~------  207 (604)
T 2et6_A          153 GLYGNF---------------GQANYASAKSALLGFAETLAKEGAKYN--IKANAIAPL-ARSRMTESIM-PPP------  207 (604)
T ss_dssp             HHHCCT---------------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEC-CCCHHHHTTS-CHH------
T ss_pred             HcCCCC---------------CchHHHHHHHHHHHHHHHHHHHhCccC--eEEEEEccC-CcCccccccC-Chh------
Confidence            988777               678999999999999999999999999  999999998 5787643221 010      


Q ss_pred             HhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC-------------CccCCCHHHHHHHHHHH
Q 021391          253 KLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP-------------NSQGQNMELAKKLWDFS  308 (313)
Q Consensus       253 ~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~  308 (313)
                      .....+|+|+|..++||++ +. .++||+++.++|+...             .+...+++....-|+..
T Consensus       208 ~~~~~~pe~vA~~v~~L~s-~~-~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  274 (604)
T 2et6_A          208 MLEKLGPEKVAPLVLYLSS-AE-NELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEI  274 (604)
T ss_dssp             HHTTCSHHHHHHHHHHHTS-SS-CCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHH
T ss_pred             hhccCCHHHHHHHHHHHhC-Cc-ccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHh
Confidence            1123589999999999998 66 8999999997765311             12234566666677654

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=2.5e-40  Score=301.13  Aligned_cols=245  Identities=17%  Similarity=0.167  Sum_probs=166.1

Q ss_pred             cCCCCCCCEEEEeCC--CCchHHHHHHHHHHcCCEEEEEecCc-----------hhHH-----------HHHHHHHHhCC
Q 021391           23 QGIDGTGLTAIVTGA--SSGIGTETARVLALRGVHVIMAVRNM-----------AAGK-----------DVREAIVKEIP   78 (313)
Q Consensus        23 ~~~~~~gk~~lItGa--s~giG~aia~~La~~G~~V~l~~r~~-----------~~~~-----------~~~~~l~~~~~   78 (313)
                      +.|+++||++|||||  ++|||+++|++|+++|++|++++|+.           ++++           ++.+++.....
T Consensus         3 ~~~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (319)
T 2ptg_A            3 LPVDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPV   82 (319)
T ss_dssp             CCCCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC------------------------------
T ss_pred             cccccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccc
Confidence            457789999999999  89999999999999999999998753           1111           12222222110


Q ss_pred             C-CceEEEEcc--C----------CC--------HHHHHHHHHHHhhcCCCeeEEEEcccCCC---CCC-ccCccchhhh
Q 021391           79 S-AKVDAMELD--V----------SS--------LASVRKFASEYNSQGRPLNILINNAGIMA---SPF-MLSKDNIELQ  133 (313)
Q Consensus        79 ~-~~~~~~~~D--~----------s~--------~~~v~~~~~~~~~~~g~id~lv~~ag~~~---~~~-~~~~~~~~~~  133 (313)
                      . ....++.+|  +          ++        +++++++++++.+++|++|+||||||+..   .+. +.+.++|+++
T Consensus        83 ~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~  162 (319)
T 2ptg_A           83 DLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAA  162 (319)
T ss_dssp             --CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHH
T ss_pred             cccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHH
Confidence            0 012344443  2          32        45899999999999999999999999753   233 7788999999


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCCCCCCcc-ccchHhHHHHHHHHHHH
Q 021391          134 FATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSF-GAYGQSKLANILHAKEL  212 (313)
Q Consensus       134 ~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~asK~a~~~l~~~l  212 (313)
                      +++|+.++++++++++|+|.+       +|+||++||.++..+.+               +. ..|++||+|+++|++++
T Consensus       163 ~~vN~~g~~~l~~~~~~~m~~-------~g~Iv~isS~~~~~~~~---------------~~~~~Y~asKaal~~l~~~l  220 (319)
T 2ptg_A          163 VSSSSYSFVSLLQHFLPLMKE-------GGSALALSYIASEKVIP---------------GYGGGMSSAKAALESDCRTL  220 (319)
T ss_dssp             HHHHTHHHHHHHHHHGGGEEE-------EEEEEEEEECC---------------------------------THHHHHHH
T ss_pred             HhHhhHHHHHHHHHHHHHHhc-------CceEEEEeccccccccC---------------ccchhhHHHHHHHHHHHHHH
Confidence            999999999999999999965       48999999999887655               45 58999999999999999


Q ss_pred             HHHhcc-CCCcEEEEEeeCcccccCCccccc------hhH----hHHHHHHHhhcCChHHHHHHHHHHHccCCccCCCce
Q 021391          213 AKHLKE-DGVNITANSLHPGSIVTNLFRYNG------ILR----GFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGE  281 (313)
Q Consensus       213 a~e~~~-~g~~I~vn~i~PG~v~t~~~~~~~------~~~----~~~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~  281 (313)
                      +.|+++ +|  ||||+|+||+++|++.....      +..    .+....+..+..+|+|+|+.++||++ +.+.++||+
T Consensus       221 a~el~~~~g--Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s-~~~~~itG~  297 (319)
T 2ptg_A          221 AFEAGRARA--VRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLS-PLARAVTGA  297 (319)
T ss_dssp             HHHHHHHHC--CEEEEEEECCCC-------------------------------CCCHHHHHHHHHHHTS-GGGTTCCSC
T ss_pred             HHHhccccC--eeEEEEeeCCccChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhC-cccCCccCC
Confidence            999985 88  99999999999999865421      001    11223456678899999999999998 788999999


Q ss_pred             eecCCcccCCC
Q 021391          282 YFSDSNIYKPN  292 (313)
Q Consensus       282 ~~~~~~~~~~~  292 (313)
                      ++.+||+....
T Consensus       298 ~i~vdGG~~~~  308 (319)
T 2ptg_A          298 TLYVDNGLHAM  308 (319)
T ss_dssp             EEEESTTCTTC
T ss_pred             EEEECCCceee
Confidence            99988876543

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=6.3e-39  Score=280.35  Aligned_cols=236  Identities=22%  Similarity=0.258  Sum_probs=200.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEE-ecCchhHHHHHHHHHHhCCCCceEE-EEccCCCHHHHHHHHHHHhhcC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMA-VRNMAAGKDVREAIVKEIPSAKVDA-MELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~~~~~-~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      +|++|||||++|||++++++|+++|++|+++ +|+.+..++..+++...  +.++.+ +.+|++|.++++++++++.+.+
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRR--GSPLVAVLGANLLEAEAATALVHQAAEVL   78 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHT--TCSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCceEEEEeccCCCHHHHHHHHHHHHHhc
Confidence            5899999999999999999999999999998 89988888777777654  345666 9999999999999999999999


Q ss_pred             CCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCC
Q 021391          107 RPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFD  184 (313)
Q Consensus       107 g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  184 (313)
                      +++|+||||||+....  .+.+.+++++.+++|+.+++++++.++|.|.+.     +.++||++||..+..+.+      
T Consensus        79 ~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~------  147 (245)
T 2ph3_A           79 GGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKA-----RFGRIVNITSVVGILGNP------  147 (245)
T ss_dssp             TCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCTHHHHCCS------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc-----CCCEEEEEeChhhccCCC------
Confidence            9999999999986542  267889999999999999999999999999873     368999999998877665      


Q ss_pred             CCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHHHHHHhhcCChHHH
Q 021391          185 KINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCNTVGKLVLKNIPQG  262 (313)
Q Consensus       185 ~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~ev  262 (313)
                               +...|+++|++++.++++++.++.++|  |++|+|+||++.|++.....  ....+....+..+..+|+|+
T Consensus       148 ---------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  216 (245)
T 2ph3_A          148 ---------GQANYVASKAGLIGFTRAVAKEYAQRG--ITVNAVAPGFIETEMTERLPQEVKEAYLKQIPAGRFGRPEEV  216 (245)
T ss_dssp             ---------SBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHTSCHHHHHHHHHTCTTCSCBCHHHH
T ss_pred             ---------CCcchHHHHHHHHHHHHHHHHHHHHcC--eEEEEEEEEeecCcchhhcCHHHHHHHHhcCCCCCCcCHHHH
Confidence                     678899999999999999999999999  99999999999998765431  11222222233456799999


Q ss_pred             HHHHHHHHccCCccCCCceeecCCccc
Q 021391          263 AATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       263 a~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      |+.++++++ +...+++|+++..+++.
T Consensus       217 a~~~~~l~~-~~~~~~~G~~~~v~gg~  242 (245)
T 2ph3_A          217 AEAVAFLVS-EKAGYITGQTLCVDGGL  242 (245)
T ss_dssp             HHHHHHHTS-GGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHhC-cccccccCCEEEECCCC
Confidence            999999997 66788999999877654

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=1.3e-39  Score=281.57  Aligned_cols=212  Identities=21%  Similarity=0.178  Sum_probs=182.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      |++++|++|||||++|||+++|++|+++|++|++++|+.+                      +|++|+++++++++++  
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~----------------------~D~~~~~~v~~~~~~~--   57 (223)
T 3uce_A            2 MGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG----------------------LDISDEKSVYHYFETI--   57 (223)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT----------------------CCTTCHHHHHHHHHHH--
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc----------------------cCCCCHHHHHHHHHHh--
Confidence            5689999999999999999999999999999999998854                      8999999999999875  


Q ss_pred             cCCCeeEEEEcccCCCC--C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          105 QGRPLNILINNAGIMAS--P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~--~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                        +++|+||||||+...  + .+.+.++|++.+++|+.++++++++++|.|.+       +|+||++||.++..+.+   
T Consensus        58 --g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-------~g~iv~~sS~~~~~~~~---  125 (223)
T 3uce_A           58 --GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ-------GGSITLTSGMLSRKVVA---  125 (223)
T ss_dssp             --CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE-------EEEEEEECCGGGTSCCT---
T ss_pred             --CCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC-------CeEEEEecchhhccCCC---
Confidence              799999999998632  2 37889999999999999999999999999865       58999999999887766   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc------hhHhHHHHHHHhh
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG------ILRGFCNTVGKLV  255 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~------~~~~~~~~~~~~~  255 (313)
                                  +...|+++|++++.++++++.|+++    ||||+|+||+++|++.....      +...+....+..+
T Consensus       126 ------------~~~~Y~asK~a~~~~~~~la~e~~~----i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (223)
T 3uce_A          126 ------------NTYVKAAINAAIEATTKVLAKELAP----IRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGK  189 (223)
T ss_dssp             ------------TCHHHHHHHHHHHHHHHHHHHHHTT----SEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTCS
T ss_pred             ------------CchHHHHHHHHHHHHHHHHHHhhcC----cEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCCC
Confidence                        6789999999999999999999986    99999999999999876542      1222334455667


Q ss_pred             cCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          256 LKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       256 ~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      ..+|+|+|++++|+++   +.++||+.+.+||+...
T Consensus       190 ~~~~~dvA~~~~~l~~---~~~~tG~~i~vdgG~~~  222 (223)
T 3uce_A          190 VGEASDIAMAYLFAIQ---NSYMTGTVIDVDGGALL  222 (223)
T ss_dssp             CBCHHHHHHHHHHHHH---CTTCCSCEEEESTTGGG
T ss_pred             ccCHHHHHHHHHHHcc---CCCCCCcEEEecCCeec
Confidence            7899999999999997   37899999998877543

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=6.2e-40  Score=295.54  Aligned_cols=244  Identities=16%  Similarity=0.189  Sum_probs=190.8

Q ss_pred             cCCCCCCCEEEEeCCC--CchHHHHHHHHHHcCCEEEEEecCchhHH-------HHHHHHHHhCC-CC---ceEEEEcc-
Q 021391           23 QGIDGTGLTAIVTGAS--SGIGTETARVLALRGVHVIMAVRNMAAGK-------DVREAIVKEIP-SA---KVDAMELD-   88 (313)
Q Consensus        23 ~~~~~~gk~~lItGas--~giG~aia~~La~~G~~V~l~~r~~~~~~-------~~~~~l~~~~~-~~---~~~~~~~D-   88 (313)
                      +.|+++||++|||||+  +|||+++|++|+++|++|++++|+.....       +..+++ .+.. +.   ....+.+| 
T Consensus         2 ~~~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   80 (297)
T 1d7o_A            2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPDGSLMEIKKVYPLDA   80 (297)
T ss_dssp             CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTTSSBCCEEEEEEECT
T ss_pred             CccccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhccccccccccccccce
Confidence            3577899999999999  99999999999999999999997632110       000011 0100 10   12334443 


Q ss_pred             -------CC----C--------HHHHHHHHHHHhhcCCCeeEEEEcccCCC---CC-CccCccchhhhhhhhhhHHHHHH
Q 021391           89 -------VS----S--------LASVRKFASEYNSQGRPLNILINNAGIMA---SP-FMLSKDNIELQFATNHLGHFLLT  145 (313)
Q Consensus        89 -------~s----~--------~~~v~~~~~~~~~~~g~id~lv~~ag~~~---~~-~~~~~~~~~~~~~~n~~~~~~l~  145 (313)
                             ++    |        +++++++++++.+++|++|+||||||+..   .+ .+.+.++|++.+++|+.++++++
T Consensus        81 ~~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~  160 (297)
T 1d7o_A           81 VFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLL  160 (297)
T ss_dssp             TCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             eccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHH
Confidence                   32    2        66899999999999999999999999753   23 37788999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCCCCCCcc-ccchHhHHHHHHHHHHHHHHhcc-CCCcE
Q 021391          146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSF-GAYGQSKLANILHAKELAKHLKE-DGVNI  223 (313)
Q Consensus       146 ~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~asK~a~~~l~~~la~e~~~-~g~~I  223 (313)
                      ++++|+|.+       +|+||++||.++..+.+               .. ..|++||+|++.|+++++.|+++ +|  |
T Consensus       161 ~~~~~~m~~-------~g~iv~isS~~~~~~~~---------------~~~~~Y~asKaa~~~~~~~la~e~~~~~g--i  216 (297)
T 1d7o_A          161 SHFLPIMNP-------GGASISLTYIASERIIP---------------GYGGGMSSAKAALESDTRVLAFEAGRKQN--I  216 (297)
T ss_dssp             HHHGGGEEE-------EEEEEEEECGGGTSCCT---------------TCTTTHHHHHHHHHHHHHHHHHHHHHHHC--C
T ss_pred             HHHHHHhcc-------CceEEEEeccccccCCC---------------CcchHHHHHHHHHHHHHHHHHHHhCcccC--c
Confidence            999999865       47999999999887665               45 58999999999999999999985 78  9


Q ss_pred             EEEEeeCcccccCCccccchhHh----HHHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCC
Q 021391          224 TANSLHPGSIVTNLFRYNGILRG----FCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPN  292 (313)
Q Consensus       224 ~vn~i~PG~v~t~~~~~~~~~~~----~~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~  292 (313)
                      |||+|+||+++|++.........    +....+..+..+|+|+|+.++||++ +.+.++||+++.+||+....
T Consensus       217 ~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s-~~~~~itG~~i~vdgG~~~~  288 (297)
T 1d7o_A          217 RVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVS-PLASAITGATIYVDNGLNSM  288 (297)
T ss_dssp             EEEEEEECCCBCCCSSCCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTGGGC
T ss_pred             EEEEEeccccccchhhhccccHHHHHHhhccCCCCCCCCHHHHHHHHHHHhC-ccccCCCCCEEEECCCceee
Confidence            99999999999999765322222    2223344567899999999999998 77899999999988776544

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=5.7e-39  Score=295.27  Aligned_cols=254  Identities=11%  Similarity=0.068  Sum_probs=205.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHH-cCCEEEEEecCchhHH------------HHHHHHHHhCCCCceEEEEccCCCH
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLAL-RGVHVIMAVRNMAAGK------------DVREAIVKEIPSAKVDAMELDVSSL   92 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~-~G~~V~l~~r~~~~~~------------~~~~~l~~~~~~~~~~~~~~D~s~~   92 (313)
                      .-.||++|||||++|||+++|+.|++ +|++|++++|+.+..+            ...+.+...  +.++..+.+|++|+
T Consensus        44 ~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~--G~~a~~i~~Dvtd~  121 (405)
T 3zu3_A           44 ANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQK--GLYAKSINGDAFSD  121 (405)
T ss_dssp             TTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTTSH
T ss_pred             CCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhc--CCceEEEECCCCCH
Confidence            45789999999999999999999999 9999999998765432            122233333  55788999999999


Q ss_pred             HHHHHHHHHHhhcCCCeeEEEEcccCCC--------------CC----------------------CccCccchhhhhhh
Q 021391           93 ASVRKFASEYNSQGRPLNILINNAGIMA--------------SP----------------------FMLSKDNIELQFAT  136 (313)
Q Consensus        93 ~~v~~~~~~~~~~~g~id~lv~~ag~~~--------------~~----------------------~~~~~~~~~~~~~~  136 (313)
                      ++++++++++.+++|++|+||||||+..              .+                      .+.+.++|++++++
T Consensus       122 ~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~V  201 (405)
T 3zu3_A          122 EIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAV  201 (405)
T ss_dssp             HHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHh
Confidence            9999999999999999999999999741              11                      24688999999999


Q ss_pred             hhhHHH-HHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCCCCCCcc--ccchHhHHHHHHHHHHHH
Q 021391          137 NHLGHF-LLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSF--GAYGQSKLANILHAKELA  213 (313)
Q Consensus       137 n~~~~~-~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~asK~a~~~l~~~la  213 (313)
                      |..+.| ++++++.+.+..     ..+|+||++||+++..+.|               .+  .+|++||+++++++|+||
T Consensus       202 n~~~~~~~~~~~~~~~~m~-----~~gG~IVniSSi~~~~~~p---------------~~~~~aY~AaKaal~~ltrsLA  261 (405)
T 3zu3_A          202 MGGEDWQMWIDALLDAGVL-----AEGAQTTAFTYLGEKITHD---------------IYWNGSIGAAKKDLDQKVLAIR  261 (405)
T ss_dssp             HSSHHHHHHHHHHHHHTCE-----EEEEEEEEEECCCCGGGTT---------------TTTTSHHHHHHHHHHHHHHHHH
T ss_pred             hchhHHHHHHHHHHHHhhh-----hCCcEEEEEeCchhhCcCC---------------CccchHHHHHHHHHHHHHHHHH
Confidence            999998 788887754332     1268999999999988766               55  899999999999999999


Q ss_pred             HHhccC-CCcEEEEEeeCcccccCCccccchhHhH--HHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCC--cc
Q 021391          214 KHLKED-GVNITANSLHPGSIVTNLFRYNGILRGF--CNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDS--NI  288 (313)
Q Consensus       214 ~e~~~~-g~~I~vn~i~PG~v~t~~~~~~~~~~~~--~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~--~~  288 (313)
                      .|++++ |  ||||+|+||++.|++....+..+.+  ....+.++..+||++++.+.||++ +   +++|..+..|  +.
T Consensus       262 ~Ela~~~G--IRVNaVaPG~i~T~~s~~ip~~p~y~~~l~~~mkr~G~~Ed~a~~i~~L~s-d---~l~~~~~~~D~~~~  335 (405)
T 3zu3_A          262 ESLAAHGG--GDARVSVLKAVVSQASSAIPMMPLYLSLLFKVMKEKGTHEGCIEQVYSLYK-D---SLCGDSPHMDQEGR  335 (405)
T ss_dssp             HHHHTTTS--CEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHHH-H---TTSSSCCCBCTTSC
T ss_pred             HHhCcccC--eEEEEEEeCCCcCchhhcCCCCcHHHHHHHHHHhcCCCcHHHHHHHHHHHh-c---cccCCCCCcCCCcC
Confidence            999999 9  9999999999999987654322211  112257778999999999999998 4   7888876544  66


Q ss_pred             cCCCccCCCHHHHH---HHHHH
Q 021391          289 YKPNSQGQNMELAK---KLWDF  307 (313)
Q Consensus       289 ~~~~~~~~~~~~~~---~~~~~  307 (313)
                      .+.-++..+++.|+   +||+.
T Consensus       336 ~r~d~~e~~~~~q~~~~~~~~~  357 (405)
T 3zu3_A          336 LRADYKELDPEVQNQVQQLWDQ  357 (405)
T ss_dssp             EECCHHHHCHHHHHHHHHHHHH
T ss_pred             CCCchhhcCHHHHHHHHHHHHH
Confidence            77777888888885   56654

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=1.6e-38  Score=283.96  Aligned_cols=222  Identities=25%  Similarity=0.294  Sum_probs=186.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      |++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++.+|++|.++++++++++.+
T Consensus         1 M~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~   75 (281)
T 3m1a_A            1 MSESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY-----PDRAEAISLDVTDGERIDVVAADVLA   75 (281)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC-----TTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCCceEEEeeCCCHHHHHHHHHHHHH
Confidence            4568899999999999999999999999999999999998877665543     45799999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          105 QGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      +++++|+||||||+....  .+.+.++|++.+++|+.++++++++++|.|.++     ..++||++||..+..+.+    
T Consensus        76 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~----  146 (281)
T 3m1a_A           76 RYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRER-----GSGSVVNISSFGGQLSFA----  146 (281)
T ss_dssp             HHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTCCCT----
T ss_pred             hCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCEEEEEcCccccCCCC----
Confidence            999999999999986432  277889999999999999999999999999883     368999999999887766    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc---------chhH------hH
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN---------GILR------GF  247 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~---------~~~~------~~  247 (313)
                                 +...|++||++++.++++++.+++++|  |+||+|+||+++|++....         .+..      ..
T Consensus       147 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (281)
T 3m1a_A          147 -----------GFSAYSATKAALEQLSEGLADEVAPFG--IKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQL  213 (281)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHH
T ss_pred             -----------CchHHHHHHHHHHHHHHHHHHHhhccC--cEEEEEecCccccccccccccccCCcchhhHHHhHHHHHH
Confidence                       678999999999999999999999999  9999999999999986532         1111      11


Q ss_pred             HHHHHHhhcCChHHHHHHHHHHHccC
Q 021391          248 CNTVGKLVLKNIPQGAATTCYVALHP  273 (313)
Q Consensus       248 ~~~~~~~~~~~~~eva~~~~~l~~~~  273 (313)
                      ....+..+..+|+|+|++++++++++
T Consensus       214 ~~~~~~~~~~~~~dva~a~~~~~~~~  239 (281)
T 3m1a_A          214 VQGSDGSQPGDPAKAAAAIRLALDTE  239 (281)
T ss_dssp             HHC-----CBCHHHHHHHHHHHHHSS
T ss_pred             HhhccCCCCCCHHHHHHHHHHHHhCC
Confidence            11123345678999999999999844

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=5.3e-38  Score=273.07  Aligned_cols=226  Identities=22%  Similarity=0.215  Sum_probs=183.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      +..+|++|||||++|||++++++|+++|++|++++|+.+.+++..+++      .++.++.+|++|.++++++++++.+.
T Consensus         2 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~   75 (234)
T 2ehd_A            2 EGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL------EGALPLPGDVREEGDWARAVAAMEEA   75 (234)
T ss_dssp             --CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh------hhceEEEecCCCHHHHHHHHHHHHHH
Confidence            345799999999999999999999999999999999987766554432      16888999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          106 GRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      ++++|+||||||+.... . +.+.+++++.+++|+.+++++++.++|.|.+     .+.++||++||..+..+.+     
T Consensus        76 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-----~~~~~iv~isS~~~~~~~~-----  145 (234)
T 2ehd_A           76 FGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLR-----RGGGTIVNVGSLAGKNPFK-----  145 (234)
T ss_dssp             HSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHT-----TTCEEEEEECCTTTTSCCT-----
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-----CCCcEEEEECCchhcCCCC-----
Confidence            99999999999976532 2 6788999999999999999999999999987     4468999999998876655     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHHH
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGA  263 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~eva  263 (313)
                                +...|+++|++++.++++++.+++++|  |++|+|+||+++|++....+  ..+       ...+|+|+|
T Consensus       146 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~--~~~-------~~~~~~dvA  204 (234)
T 2ehd_A          146 ----------GGAAYNASKFGLLGLAGAAMLDLREAN--VRVVNVLPGSVDTGFAGNTP--GQA-------WKLKPEDVA  204 (234)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEECC-------------------------CCHHHHH
T ss_pred             ----------CCchhhHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcCCcccccc--ccc-------CCCCHHHHH
Confidence                      677999999999999999999999999  99999999999999865321  110       146899999


Q ss_pred             HHHHHHHccCCccCCCceeecCCccc
Q 021391          264 ATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       264 ~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      +.++++++ +...+++|+++...+..
T Consensus       205 ~~~~~l~~-~~~~~~~g~~~~~~~~~  229 (234)
T 2ehd_A          205 QAVLFALE-MPGHAMVSEIELRPTRP  229 (234)
T ss_dssp             HHHHHHHH-SCCSSCCCEEECCC---
T ss_pred             HHHHHHhC-CCcccccceEEEeecCC
Confidence            99999998 67789999987665543

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=9.5e-39  Score=281.33  Aligned_cols=233  Identities=24%  Similarity=0.226  Sum_probs=190.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCE-EEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCH-HHHHHHHHHH
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVH-VIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSL-ASVRKFASEY  102 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~-V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~-~~v~~~~~~~  102 (313)
                      |+++||++|||||++|||+++|++|+++|++ |++++|+.+.  +..+++.+..++.++.++.+|++|+ ++++++++++
T Consensus         1 m~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   78 (254)
T 1sby_A            1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKI   78 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHH
Confidence            5689999999999999999999999999996 9999998642  2334555554456789999999998 9999999999


Q ss_pred             hhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          103 NSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      .++++++|+||||||+.      +.+++++.+++|+.++++++++++|.|.+..  ....++||++||.++..+.+    
T Consensus        79 ~~~~g~id~lv~~Ag~~------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~~~g~iv~isS~~~~~~~~----  146 (254)
T 1sby_A           79 FDQLKTVDILINGAGIL------DDHQIERTIAINFTGLVNTTTAILDFWDKRK--GGPGGIIANICSVTGFNAIH----  146 (254)
T ss_dssp             HHHHSCCCEEEECCCCC------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGG--TCCCEEEEEECCGGGTSCCT----
T ss_pred             HHhcCCCCEEEECCccC------CHHHHhhhheeeehhHHHHHHHHHHHHHHhc--CCCCCEEEEECchhhccCCC----
Confidence            99999999999999974      4678999999999999999999999997631  01258999999999887665    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc-h---hHhHHHHHHHhhcCC
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG-I---LRGFCNTVGKLVLKN  258 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~-~---~~~~~~~~~~~~~~~  258 (313)
                                 ....|++||++++.++++++.++.+.|  |+||+|+||+++|++..... +   ..............+
T Consensus       147 -----------~~~~Y~~sK~a~~~~~~~la~~~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (254)
T 1sby_A          147 -----------QVPVYSASKAAVVSFTNSLAKLAPITG--VTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQT  213 (254)
T ss_dssp             -----------TSHHHHHHHHHHHHHHHHHHHHHHHHS--EEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEE
T ss_pred             -----------CchHHHHHHHHHHHHHHHHHHHhccCC--eEEEEEecCCccCccccccchhhhhhHHHHHHHhcCCCCC
Confidence                       677999999999999999999999888  99999999999999865421 1   111111111112348


Q ss_pred             hHHHHHHHHHHHccCCccCCCceeecCCcc
Q 021391          259 IPQGAATTCYVALHPQVQGVSGEYFSDSNI  288 (313)
Q Consensus       259 ~~eva~~~~~l~~~~~~~~~tG~~~~~~~~  288 (313)
                      |+|+|+.++++++    .+++|+++..+|+
T Consensus       214 ~~dvA~~i~~~~~----~~~~G~~~~v~gG  239 (254)
T 1sby_A          214 SEQCGQNFVKAIE----ANKNGAIWKLDLG  239 (254)
T ss_dssp             HHHHHHHHHHHHH----HCCTTCEEEEETT
T ss_pred             HHHHHHHHHHHHH----cCCCCCEEEEeCC
Confidence            9999999999985    4789999887654

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=4e-38  Score=275.24  Aligned_cols=234  Identities=22%  Similarity=0.327  Sum_probs=193.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+..++..++    .  .+..++.+|++|+++++++++   
T Consensus         2 ~~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~----~--~~~~~~~~D~~~~~~~~~~~~---   72 (244)
T 1cyd_A            2 KLNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE----C--PGIEPVCVDLGDWDATEKALG---   72 (244)
T ss_dssp             -CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----S--TTCEEEECCTTCHHHHHHHHT---
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----c--cCCCcEEecCCCHHHHHHHHH---
Confidence            3568999999999999999999999999999999999998776654433    2  245677999999999888876   


Q ss_pred             hcCCCeeEEEEcccCCCC-CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          104 SQGRPLNILINNAGIMAS-PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~-~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                       .++++|+||||||+... +. +.+.+++++.+++|+.+++++++++.|.|.+.    +..++||++||..+..+.+   
T Consensus        73 -~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~----~~~~~iv~~sS~~~~~~~~---  144 (244)
T 1cyd_A           73 -GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINR----GVPGSIVNVSSMVAHVTFP---  144 (244)
T ss_dssp             -TCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCCEEEEEECCGGGTSCCT---
T ss_pred             -HcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhC----CCCeEEEEEcchhhcCCCC---
Confidence             56789999999997653 22 67889999999999999999999999999873    1158999999998877655   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----chhHhHHHHHHHhhcC
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----GILRGFCNTVGKLVLK  257 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~  257 (313)
                                  +...|++||++++.++++++.++++.|  |++|+|+||++.|++....    .+...+....+..+..
T Consensus       145 ------------~~~~Y~~sK~a~~~~~~~~a~~~~~~g--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (244)
T 1cyd_A          145 ------------NLITYSSTKGAMTMLTKAMAMELGPHK--IRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFA  210 (244)
T ss_dssp             ------------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCB
T ss_pred             ------------CcchhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCcccCccccccccCHHHHHHHHhcCCccCCC
Confidence                        677899999999999999999999999  9999999999999875421    1112233333445567


Q ss_pred             ChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          258 NIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       258 ~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      +++|+|++++++++ +...+++|+.+..+++.
T Consensus       211 ~~~dva~~~~~l~~-~~~~~~~G~~~~v~gG~  241 (244)
T 1cyd_A          211 EVEDVVNSILFLLS-DRSASTSGGGILVDAGY  241 (244)
T ss_dssp             CHHHHHHHHHHHHS-GGGTTCCSSEEEESTTG
T ss_pred             CHHHHHHHHHHHhC-chhhcccCCEEEECCCc
Confidence            99999999999998 67789999999877664

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-38  Score=283.15  Aligned_cols=239  Identities=22%  Similarity=0.244  Sum_probs=201.1

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEec-CchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVR-NMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      ..+++++|++|||||++|||++++++|+++|++|++++| +.+..++..+++...  +.++.++.+|++|++++++++++
T Consensus        15 ~~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~   92 (274)
T 1ja9_A           15 ASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL--GAQGVAIQADISKPSEVVALFDK   92 (274)
T ss_dssp             -CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHH
Confidence            446789999999999999999999999999999999999 777777777777654  45788999999999999999999


Q ss_pred             HhhcCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccc-cccc
Q 021391          102 YNSQGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHR-FAYS  178 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~-~~~~  178 (313)
                      +.+.++++|+||||||+.... . +.+.+++++.+++|+.++++++++++|.|.+       +++||++||.++. .+.+
T Consensus        93 ~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~  165 (274)
T 1ja9_A           93 AVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR-------GGRIILTSSIAAVMTGIP  165 (274)
T ss_dssp             HHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE-------EEEEEEECCGGGTCCSCC
T ss_pred             HHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------CCEEEEEcChHhccCCCC
Confidence            999999999999999986542 2 6788999999999999999999999999864       4799999999887 5544


Q ss_pred             CCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccc------------cc---h
Q 021391          179 EGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY------------NG---I  243 (313)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~------------~~---~  243 (313)
                                     +...|+++|++++.++++++.+++..|  |++|+|+||++.|++...            ..   .
T Consensus       166 ---------------~~~~Y~~sK~a~~~~~~~~~~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  228 (274)
T 1ja9_A          166 ---------------NHALYAGSKAAVEGFCRAFAVDCGAKG--VTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKI  228 (274)
T ss_dssp             ---------------SCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHH
T ss_pred             ---------------CCchHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcccccchhcccccccccccccCchHHH
Confidence                           567899999999999999999999999  999999999999987552            10   1


Q ss_pred             hHhHHHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcc
Q 021391          244 LRGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNI  288 (313)
Q Consensus       244 ~~~~~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~  288 (313)
                      ...+....+..+..+|+|+|++++++++ +...+++|+.+..+++
T Consensus       229 ~~~~~~~~~~~~~~~~~dva~~i~~l~~-~~~~~~~G~~~~v~gG  272 (274)
T 1ja9_A          229 DEGLANMNPLKRIGYPADIGRAVSALCQ-EESEWINGQVIKLTGG  272 (274)
T ss_dssp             HHHHHHTSTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTT
T ss_pred             HHHHHhcCCCCCccCHHHHHHHHHHHhC-cccccccCcEEEecCC
Confidence            1111122233456799999999999997 6678899999988765

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=1.9e-38  Score=278.96  Aligned_cols=229  Identities=19%  Similarity=0.177  Sum_probs=186.3

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      ...-+++||++|||||++|||+++|++|+++|++|++++|+.+..+    ++     + .+.++ +|+  .+++++++++
T Consensus        12 ~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~-----~-~~~~~-~D~--~~~~~~~~~~   78 (249)
T 1o5i_A           12 HMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RS-----G-HRYVV-CDL--RKDLDLLFEK   78 (249)
T ss_dssp             ----CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HT-----C-SEEEE-CCT--TTCHHHHHHH
T ss_pred             hHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH----hh-----C-CeEEE-eeH--HHHHHHHHHH
Confidence            3455689999999999999999999999999999999999863222    21     2 56677 999  5567777776


Q ss_pred             HhhcCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccC
Q 021391          102 YNSQGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSE  179 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~  179 (313)
                      +.    ++|+||||||+.... . +.+.++|++.+++|+.++++++++++|.|.+.     ..++||++||.++..+.+ 
T Consensus        79 ~~----~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~-  148 (249)
T 1o5i_A           79 VK----EVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK-----GWGRIVAITSFSVISPIE-  148 (249)
T ss_dssp             SC----CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCT-
T ss_pred             hc----CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEEcchHhcCCCC-
Confidence            53    799999999976542 2 67889999999999999999999999999883     368999999999887655 


Q ss_pred             CCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhH-hHHHHHHHhhc
Q 021391          180 GIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILR-GFCNTVGKLVL  256 (313)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~-~~~~~~~~~~~  256 (313)
                                    +...|++||++++.++++++.|++++|  |+||+|+||+++|++.....  ... .+....+..+.
T Consensus       149 --------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~p~~~~  212 (249)
T 1o5i_A          149 --------------NLYTSNSARMALTGFLKTLSFEVAPYG--ITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRM  212 (249)
T ss_dssp             --------------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSC
T ss_pred             --------------CCchHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCCCccCcccccchhhHHHHHHhcCCCCCC
Confidence                          678999999999999999999999999  99999999999999865321  111 22222344566


Q ss_pred             CChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          257 KNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       257 ~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      .+|+|+|+.++||++ +.+.++||+++..+|+..
T Consensus       213 ~~~~dvA~~i~~l~s-~~~~~~tG~~~~vdgG~~  245 (249)
T 1o5i_A          213 AKPEEIASVVAFLCS-EKASYLTGQTIVVDGGLS  245 (249)
T ss_dssp             BCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTCC
T ss_pred             cCHHHHHHHHHHHcC-ccccCCCCCEEEECCCcc
Confidence            799999999999998 778899999999887654

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=7.6e-38  Score=279.36  Aligned_cols=239  Identities=22%  Similarity=0.225  Sum_probs=196.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      ++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++.......++.++.+|++|+++++++++++.+.
T Consensus        29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  108 (279)
T 1xg5_A           29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ  108 (279)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            47899999999999999999999999999999999999888888887776543457889999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccc--ccccCCC
Q 021391          106 GRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHR--FAYSEGI  181 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~--~~~~~~~  181 (313)
                      ++++|+||||||+.... . +.+.++|++.+++|+.+++++++.++|.|.+..   ..+++||++||..+.  .+.+   
T Consensus       109 ~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~---~~~g~iv~isS~~~~~~~~~~---  182 (279)
T 1xg5_A          109 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERN---VDDGHIININSMSGHRVLPLS---  182 (279)
T ss_dssp             HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT---CCSCEEEEECCGGGTSCCSCG---
T ss_pred             CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---CCCceEEEEcChhhcccCCCC---
Confidence            99999999999986542 2 668899999999999999999999999998731   113899999999876  3333   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhc--cCCCcEEEEEeeCcccccCCcccc-c-hhHhHHHHHHHhhcC
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLK--EDGVNITANSLHPGSIVTNLFRYN-G-ILRGFCNTVGKLVLK  257 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~--~~g~~I~vn~i~PG~v~t~~~~~~-~-~~~~~~~~~~~~~~~  257 (313)
                                  +...|+++|++++.++++++.|++  +.|  |+||+|+||+++|++.... . .........+..+..
T Consensus       183 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~~~~--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  248 (279)
T 1xg5_A          183 ------------VTHFYSATKYAVTALTEGLRQELREAQTH--IRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCL  248 (279)
T ss_dssp             ------------GGHHHHHHHHHHHHHHHHHHHHHHHTTCC--CEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC---CB
T ss_pred             ------------CCchhHHHHHHHHHHHHHHHHHHhhcCCC--eEEEEEecCcccchhhhhhcccChhHHhhhcccccCC
Confidence                        567899999999999999999998  777  9999999999999974221 1 111122223344567


Q ss_pred             ChHHHHHHHHHHHccCCccCCCceeecC
Q 021391          258 NIPQGAATTCYVALHPQVQGVSGEYFSD  285 (313)
Q Consensus       258 ~~~eva~~~~~l~~~~~~~~~tG~~~~~  285 (313)
                      +|+|+|+.++++++ +...+.+|++...
T Consensus       249 ~~~dvA~~i~~l~~-~~~~~~~g~i~i~  275 (279)
T 1xg5_A          249 KPEDVAEAVIYVLS-TPAHIQIGDIQMR  275 (279)
T ss_dssp             CHHHHHHHHHHHHH-SCTTEEEEEEEEE
T ss_pred             CHHHHHHHHHHHhc-CCcceEeeeEEEc
Confidence            99999999999998 5566778876544

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=2.4e-38  Score=311.14  Aligned_cols=261  Identities=21%  Similarity=0.214  Sum_probs=192.4

Q ss_pred             CCCccchhccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEec---------CchhHHHHHHHHHHhCCCCceEE
Q 021391           14 ASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVR---------NMAAGKDVREAIVKEIPSAKVDA   84 (313)
Q Consensus        14 ~~~~~~~~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r---------~~~~~~~~~~~l~~~~~~~~~~~   84 (313)
                      +++-..+....++++||++|||||++|||+++|++|+++|++|++++|         +.+.++...+++....  ..   
T Consensus         4 ~~~~~~~~~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~--~~---   78 (613)
T 3oml_A            4 HHHHMSSSDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAG--GE---   78 (613)
T ss_dssp             -----------CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTT--CC---
T ss_pred             CcccccCcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhC--Ce---
Confidence            344455666778899999999999999999999999999999999988         7777888888877652  22   


Q ss_pred             EEccCCCHHHHHHHHHHHhhcCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCC
Q 021391           85 MELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSRE  162 (313)
Q Consensus        85 ~~~D~s~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~  162 (313)
                      ..+|+++.++++++++++.+++|+||+||||||+.... . +.+.++|++++++|+.|+++++++++|+|.+     ++.
T Consensus        79 ~~~D~~d~~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~-----~~~  153 (613)
T 3oml_A           79 AVADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKK-----QNY  153 (613)
T ss_dssp             EEECCCCGGGHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----TTC
T ss_pred             EEEEeCCHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCC
Confidence            34899999999999999999999999999999987543 2 7889999999999999999999999999998     457


Q ss_pred             CeEEEECCccccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc
Q 021391          163 GRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG  242 (313)
Q Consensus       163 g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~  242 (313)
                      |+||++||.++..+.+               +...|++||+|+++|+++++.|++++|  |+||+|+||.+ |++.....
T Consensus       154 g~IV~isS~a~~~~~~---------------~~~~Y~asKaal~~lt~~la~e~~~~g--I~vn~v~Pg~~-t~~~~~~~  215 (613)
T 3oml_A          154 GRIIMTSSNSGIYGNF---------------GQVNYTAAKMGLIGLANTVAIEGARNN--VLCNVIVPTAA-SRMTEGIL  215 (613)
T ss_dssp             EEEEEECCHHHHHCCT---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEC-------CCCC
T ss_pred             CEEEEECCHHHcCCCC---------------CChHHHHHHHHHHHHHHHHHHHhCccC--eEEEEEECCCC-Chhhhhcc
Confidence            9999999999998877               678999999999999999999999999  99999999975 55544321


Q ss_pred             hhHhHHHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC------------C---ccCCCHHHHHHHHHH
Q 021391          243 ILRGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP------------N---SQGQNMELAKKLWDF  307 (313)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~------------~---~~~~~~~~~~~~~~~  307 (313)
                       ..      ......+|+|+|+.++||++ +. .++||+++.++|+...            .   ....+.|...+.|+.
T Consensus       216 -~~------~~~~~~~pedvA~~v~~L~s-~~-~~~tG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~~~~e~~~~~w~~  286 (613)
T 3oml_A          216 -PD------ILFNELKPKLIAPVVAYLCH-ES-CEDNGSYIESAAGWATKLHMVRGKGAVLRPSLDDPVTIEYVKDVWSN  286 (613)
T ss_dssp             -CH------HHHTTCCGGGTHHHHHHTTS-TT-CCCCSCEEEEETTEEEEECCCBCCCCCSSSSTTSCCCHHHHHHTHHH
T ss_pred             -ch------hhhhcCCHHHHHHHHHHhcC-CC-cCCCceEEEECCCeEEEEEEEecCCEEecCccccCCCHHHHHHHHHH
Confidence             11      11224589999999999998 55 8999999986643211            1   123577888899988


Q ss_pred             HHhh
Q 021391          308 SMNL  311 (313)
Q Consensus       308 ~~~~  311 (313)
                      ..+.
T Consensus       287 i~~~  290 (613)
T 3oml_A          287 VTDM  290 (613)
T ss_dssp             HTCC
T ss_pred             hhcc
Confidence            7554

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=2.7e-39  Score=282.85  Aligned_cols=221  Identities=14%  Similarity=0.060  Sum_probs=187.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      ..++|++|||||++|||++++++|+++|++|++++|+.+..+            ....++.+|++|+++++++++++.++
T Consensus         4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~v~~~~~~~~~~   71 (241)
T 1dhr_A            4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------------SASVIVKMTDSFTEQADQVTAEVGKL   71 (241)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------------SEEEECCCCSCHHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc------------CCcEEEEcCCCCHHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999876432            13577899999999999999999998


Q ss_pred             C--CCeeEEEEcccCCCC-C--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          106 G--RPLNILINNAGIMAS-P--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       106 ~--g~id~lv~~ag~~~~-~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      +  +++|+||||||+... +  .+.+.+++++.+++|+.+++.+++++.|.|.+       +++||++||.++..+.+  
T Consensus        72 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~--  142 (241)
T 1dhr_A           72 LGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE-------GGLLTLAGAKAALDGTP--  142 (241)
T ss_dssp             HTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCGGGGSCCT--
T ss_pred             hCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc-------CCEEEEECCHHHccCCC--
Confidence            8  799999999997643 2  35667889999999999999999999999865       57999999999887766  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhc--cCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCC
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLK--EDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKN  258 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~--~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  258 (313)
                                   +...|++||++++.++++++.|++  ++|  |+||+|+||+++|++........      ......+
T Consensus       143 -------------~~~~Y~asK~a~~~~~~~la~e~~~~~~g--i~v~~v~PG~v~T~~~~~~~~~~------~~~~~~~  201 (241)
T 1dhr_A          143 -------------GMIGYGMAKGAVHQLCQSLAGKNSGMPSG--AAAIAVLPVTLDTPMNRKSMPEA------DFSSWTP  201 (241)
T ss_dssp             -------------TBHHHHHHHHHHHHHHHHHTSTTSSCCTT--CEEEEEEESCEECHHHHHHSTTS------CGGGSEE
T ss_pred             -------------CchHHHHHHHHHHHHHHHHHHHhccCCCC--eEEEEEecCcccCccccccCcch------hhccCCC
Confidence                         678999999999999999999999  888  99999999999999754321000      1122457


Q ss_pred             hHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          259 IPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       259 ~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      |+|+|+.++++++ +...++||+++.++|..
T Consensus       202 ~~~vA~~v~~l~~-~~~~~~~G~~~~v~g~~  231 (241)
T 1dhr_A          202 LEFLVETFHDWIT-GNKRPNSGSLIQVVTTD  231 (241)
T ss_dssp             HHHHHHHHHHHHT-TTTCCCTTCEEEEEEET
T ss_pred             HHHHHHHHHHHhc-CCCcCccceEEEEeCCC
Confidence            8999999999997 78899999999877653

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=1.6e-38  Score=279.65  Aligned_cols=221  Identities=15%  Similarity=0.095  Sum_probs=188.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      .+..+|++|||||++|||+++|++|+++|++|++++|+.++.+              ...+.+|++|.++++++++++.+
T Consensus        18 ~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~--------------~~~~~~d~~d~~~v~~~~~~~~~   83 (251)
T 3orf_A           18 GSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA--------------DHSFTIKDSGEEEIKSVIEKINS   83 (251)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS--------------SEEEECSCSSHHHHHHHHHHHHT
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------------ccceEEEeCCHHHHHHHHHHHHH
Confidence            3345799999999999999999999999999999999876422              23578999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCCC---CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          105 QGRPLNILINNAGIMASP---FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      +++++|+||||||+....   .+.+.+++++.+++|+.+++++++++.|.|.+       +|+||++||.++..+.+   
T Consensus        84 ~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~~~---  153 (251)
T 3orf_A           84 KSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ-------GGLFVLTGASAALNRTS---  153 (251)
T ss_dssp             TTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCGGGGSCCT---
T ss_pred             HcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc-------CCEEEEEechhhccCCC---
Confidence            999999999999986542   26678899999999999999999999999865       57999999999987766   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhc--cCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCCh
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLK--EDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNI  259 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~--~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  259 (313)
                                  +...|++||+|++.++++++.+++  +.|  |+||+|+||+++|++....      ....+..+..+|
T Consensus       154 ------------~~~~Y~~sKaa~~~~~~~la~e~~~~~~g--i~v~~v~PG~v~t~~~~~~------~~~~~~~~~~~~  213 (251)
T 3orf_A          154 ------------GMIAYGATKAATHHIIKDLASENGGLPAG--STSLGILPVTLDTPTNRKY------MSDANFDDWTPL  213 (251)
T ss_dssp             ------------TBHHHHHHHHHHHHHHHHHTSTTSSSCTT--CEEEEEEESCBCCHHHHHH------CTTSCGGGSBCH
T ss_pred             ------------CCchhHHHHHHHHHHHHHHHHHhcccCCC--cEEEEEecCcCcCcchhhh------cccccccccCCH
Confidence                        678999999999999999999987  788  9999999999999875432      111234556789


Q ss_pred             HHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          260 PQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       260 ~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      +|+|+.+++|++++.+.++||+.+.++++.
T Consensus       214 ~dva~~i~~l~~~~~~~~~tG~~i~v~~g~  243 (251)
T 3orf_A          214 SEVAEKLFEWSTNSDSRPTNGSLVKFETKS  243 (251)
T ss_dssp             HHHHHHHHHHHHCGGGCCCTTCEEEEEEET
T ss_pred             HHHHHHHHHHhcCccccCCcceEEEEecCC
Confidence            999999999999448899999999876543

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=8.3e-39  Score=280.32  Aligned_cols=235  Identities=17%  Similarity=0.123  Sum_probs=165.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      |+++||++|||||++|||+++|++|++ |++|++++|+.+..++..+       ..++.++.+|+++.++ ...+.+..+
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~-~~~~~~~~~   71 (245)
T 3e9n_A            1 MSLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-------IEGVEPIESDIVKEVL-EEGGVDKLK   71 (245)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-------STTEEEEECCHHHHHH-TSSSCGGGT
T ss_pred             CCCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-------hcCCcceecccchHHH-HHHHHHHHH
Confidence            568899999999999999999999998 9999999999877665432       2368899999999877 555555667


Q ss_pred             cCCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          105 QGRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      +++++|+||||||+.....  +.+.++|++.+++|+.++++++++++|.|.+.      +|+||++||.++..+.+    
T Consensus        72 ~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~------~g~iv~isS~~~~~~~~----  141 (245)
T 3e9n_A           72 NLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAA------SGCVIYINSGAGNGPHP----  141 (245)
T ss_dssp             TCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEEC-------------
T ss_pred             hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc------CCeEEEEcCcccccCCC----
Confidence            7889999999999875432  66889999999999999999999999999873      48999999999988766    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHH
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQG  262 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~ev  262 (313)
                                 +...|++||+|++.++++++.|++++|  |+||+|+||+++|++....  ........+..+..+|+|+
T Consensus       142 -----------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~p~dv  206 (245)
T 3e9n_A          142 -----------GNTIYAASKHALRGLADAFRKEEANNG--IRVSTVSPGPTNTPMLQGL--MDSQGTNFRPEIYIEPKEI  206 (245)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCC------------------CCGGGSCHHHH
T ss_pred             -----------CchHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCCccCchhhhh--hhhhhcccccccCCCHHHH
Confidence                       678999999999999999999999999  9999999999999987654  1222223344567899999


Q ss_pred             HHHHHHHHccCCccCCCceeecCCcccCCCc
Q 021391          263 AATTCYVALHPQVQGVSGEYFSDSNIYKPNS  293 (313)
Q Consensus       263 a~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~  293 (313)
                      |++++|+++++....+.+..+.+..+..++.
T Consensus       207 A~~i~~l~~~~~~~~~~~i~~~p~~e~~~~~  237 (245)
T 3e9n_A          207 ANAIRFVIDAGETTQITNVDVRPRIELADRK  237 (245)
T ss_dssp             HHHHHHHHTSCTTEEEEEEEEEEC-------
T ss_pred             HHHHHHHHcCCCccceeeeEEEecccccccc
Confidence            9999999986665555555666666555543

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=1e-37  Score=276.66  Aligned_cols=240  Identities=28%  Similarity=0.364  Sum_probs=196.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHH-cCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           27 GTGLTAIVTGASSGIGTETARVLAL-RGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~-~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      .++|++|||||++|||++++++|++ +|++|++++|+.+..++..+++...  +.++.++.+|++|.++++++++++.++
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   79 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQLDIDDLQSIRALRDFLRKE   79 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc--CCeeEEEECCCCCHHHHHHHHHHHHHh
Confidence            4689999999999999999999999 9999999999998888888887665  457899999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCCCC-ccC-ccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC--
Q 021391          106 GRPLNILINNAGIMASPF-MLS-KDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI--  181 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~-~~~-~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~--  181 (313)
                      ++++|+||||||+..... ..+ .+++++++++|+.+++++++++.|.|.+       .++||++||..+..+.+...  
T Consensus        80 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~~sS~~~~~~~~~~~~~  152 (276)
T 1wma_A           80 YGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP-------QGRVVNVSSIMSVRALKSCSPE  152 (276)
T ss_dssp             HSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEECCHHHHHHHHTSCHH
T ss_pred             cCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCC-------CCEEEEECChhhhcccccCChh
Confidence            999999999999865433 333 4789999999999999999999998865       47999999988764421000  


Q ss_pred             -----CCCCCC--------------------CCCCCCccccchHhHHHHHHHHHHHHHHhcc----CCCcEEEEEeeCcc
Q 021391          182 -----RFDKIN--------------------DESAYNSFGAYGQSKLANILHAKELAKHLKE----DGVNITANSLHPGS  232 (313)
Q Consensus       182 -----~~~~~~--------------------~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~----~g~~I~vn~i~PG~  232 (313)
                           +...+.                    ....+ +...|++||++++.+++.++.++++    .|  |+||+|+||+
T Consensus       153 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~--i~v~~v~PG~  229 (276)
T 1wma_A          153 LQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGW-PSSAYGVTKIGVTVLSRIHARKLSEQRKGDK--ILLNACCPGW  229 (276)
T ss_dssp             HHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTC-CSCHHHHHHHHHHHHHHHHHHHHHHHCTTSC--CEEEEEECCS
T ss_pred             HHhhccccccchhhhhhhhhhhhhhhcccccccCCC-ccchhHHHHHHHHHHHHHHHHHhhcccCCCc--eEEEEecCCc
Confidence                 000000                    00111 2378999999999999999999988    68  9999999999


Q ss_pred             cccCCccccchhHhHHHHHHHhhcCChHHHHHHHHHHHccCC-ccCCCceeecCCcccCC
Q 021391          233 IVTNLFRYNGILRGFCNTVGKLVLKNIPQGAATTCYVALHPQ-VQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       233 v~t~~~~~~~~~~~~~~~~~~~~~~~~~eva~~~~~l~~~~~-~~~~tG~~~~~~~~~~~  291 (313)
                      ++|++...             ....+|+|+|+.++||++++. ..++||+++..++..+|
T Consensus       230 v~t~~~~~-------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~~~~~~~~  276 (276)
T 1wma_A          230 VRTDMAGP-------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVSEKRVEQW  276 (276)
T ss_dssp             BCSTTTCT-------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEETTEEECC
T ss_pred             cccCcCCc-------------cccCChhHhhhhHhhhhcCcccccccCceEeccCceecC
Confidence            99998653             235789999999999998554 47999999997776553

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=7.4e-39  Score=279.12  Aligned_cols=221  Identities=13%  Similarity=0.020  Sum_probs=186.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      |++|++|||||++|||++++++|+++|++|++++|+.+..+            ....++.+|++|+++++++++++.+.+
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~~~~~~~~~~~~~   68 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------------DSNILVDGNKNWTEQEQSILEQTASSL   68 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------------SEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc------------cccEEEeCCCCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999999999999999876532            235778999999999999999999988


Q ss_pred             --CCeeEEEEcccCCCC-C--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          107 --RPLNILINNAGIMAS-P--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       107 --g~id~lv~~ag~~~~-~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                        +++|+||||||+... +  .+.+.++|++.+++|+.+++++++++.|.|.+       +++||++||.++..+.+   
T Consensus        69 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~~~---  138 (236)
T 1ooe_A           69 QGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP-------GGLLQLTGAAAAMGPTP---  138 (236)
T ss_dssp             TTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCGGGGSCCT---
T ss_pred             CCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc-------CCEEEEECchhhccCCC---
Confidence              799999999997643 2  35567889999999999999999999999865       57999999999887766   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhc--cCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCCh
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLK--EDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNI  259 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~--~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  259 (313)
                                  +...|++||++++.++++++.|++  ++|  |+||+|+||+++|++........      ......+|
T Consensus       139 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~------~~~~~~~~  198 (236)
T 1ooe_A          139 ------------SMIGYGMAKAAVHHLTSSLAAKDSGLPDN--SAVLTIMPVTLDTPMNRKWMPNA------DHSSWTPL  198 (236)
T ss_dssp             ------------TBHHHHHHHHHHHHHHHHHHSTTSSCCTT--CEEEEEEESCBCCHHHHHHSTTC------CGGGCBCH
T ss_pred             ------------CcHHHHHHHHHHHHHHHHHHHHhcccCCC--eEEEEEecCcccCcchhhcCCCc------cccccCCH
Confidence                        678999999999999999999998  888  99999999999998754210000      11234679


Q ss_pred             HHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          260 PQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       260 ~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      +|+|+.+++++.++...++||+++..+++.
T Consensus       199 ~dvA~~i~~~l~s~~~~~~~G~~~~v~gg~  228 (236)
T 1ooe_A          199 SFISEHLLKWTTETSSRPSSGALLKITTEN  228 (236)
T ss_dssp             HHHHHHHHHHHHCGGGCCCTTCEEEEEEET
T ss_pred             HHHHHHHHHHHcCCCcccccccEEEEecCC
Confidence            999999996664488899999999877653

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=2.9e-37  Score=278.81  Aligned_cols=239  Identities=26%  Similarity=0.317  Sum_probs=191.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCH-HHHHHHHHHHh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSL-ASVRKFASEYN  103 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~-~~v~~~~~~~~  103 (313)
                      ..+++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.... +.++.++.+|++|+ ++++++++.+.
T Consensus         8 ~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~v~~~~~~~~   86 (311)
T 3o26_A            8 TVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN-HENVVFHQLDVTDPIATMSSLADFIK   86 (311)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT-CCSEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             ccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCceEEEEccCCCcHHHHHHHHHHHH
Confidence            34689999999999999999999999999999999999999999888887653 45799999999998 99999999999


Q ss_pred             hcCCCeeEEEEcccCCCC-------------------------------C-CccCccchhhhhhhhhhHHHHHHHHHHHH
Q 021391          104 SQGRPLNILINNAGIMAS-------------------------------P-FMLSKDNIELQFATNHLGHFLLTHLLLDT  151 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~-------------------------------~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  151 (313)
                      +.++++|+||||||+...                               + .+.+.+++++++++|+.|+++++++++|.
T Consensus        87 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  166 (311)
T 3o26_A           87 THFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPL  166 (311)
T ss_dssp             HHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             HhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHh
Confidence            999999999999998642                               1 15577889999999999999999999999


Q ss_pred             HHHhhccCCCCCeEEEECCccccccccCCC-------CC--------------------CCCCCCCC-CCccccchHhHH
Q 021391          152 MKKTAQKSSREGRIVNVSSEAHRFAYSEGI-------RF--------------------DKINDESA-YNSFGAYGQSKL  203 (313)
Q Consensus       152 l~~~~~~~~~~g~iv~isS~~~~~~~~~~~-------~~--------------------~~~~~~~~-~~~~~~Y~asK~  203 (313)
                      |.+     +..++||++||.++..+.....       +.                    ........ .++..+|++||+
T Consensus       167 l~~-----~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~  241 (311)
T 3o26_A          167 LQL-----SDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKA  241 (311)
T ss_dssp             HTT-----SSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHH
T ss_pred             hcc-----CCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHH
Confidence            987     4478999999998876542110       00                    00011111 235578999999


Q ss_pred             HHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHHHHHHHHHHccCCccCCCceee
Q 021391          204 ANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYF  283 (313)
Q Consensus       204 a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~  283 (313)
                      |++.++++++.++.+    |+||+|+||+|+|++.....             ..+++++|+.+++++..+. ...+|.++
T Consensus       242 a~~~~~~~la~e~~~----i~v~~v~PG~v~T~~~~~~~-------------~~~~~~~a~~~~~~~~~~~-~~~~g~~~  303 (311)
T 3o26_A          242 CLNAYTRVLANKIPK----FQVNCVCPGLVKTEMNYGIG-------------NYTAEEGAEHVVRIALFPD-DGPSGFFY  303 (311)
T ss_dssp             HHHHHHHHHHHHCTT----SEEEEECCCSBCSGGGTTCC-------------SBCHHHHHHHHHHHHTCCS-SCCCSCEE
T ss_pred             HHHHHHHHHHhhcCC----ceEEEecCCceecCCcCCCC-------------CCCHHHHHHHHHHHHhCCC-CCCCceEe
Confidence            999999999999964    99999999999999866432             2479999999999997443 55677777


Q ss_pred             cCCc
Q 021391          284 SDSN  287 (313)
Q Consensus       284 ~~~~  287 (313)
                      ....
T Consensus       304 ~~s~  307 (311)
T 3o26_A          304 DCSE  307 (311)
T ss_dssp             TC--
T ss_pred             cccc
Confidence            6543

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.4e-37  Score=270.68  Aligned_cols=233  Identities=26%  Similarity=0.301  Sum_probs=185.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcC--CEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRG--VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      |++|++|||||++|||++++++|+++|  ++|++++|+.+..+++.+ +    .+.++.++.+|++++++++++++++.+
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~-~----~~~~~~~~~~D~~~~~~~~~~~~~~~~   75 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS-I----KDSRVHVLPLTVTCDKSLDTFVSKVGE   75 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT-C----CCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh-c----cCCceEEEEeecCCHHHHHHHHHHHHH
Confidence            468999999999999999999999999  999999999887765422 1    255789999999999999999999999


Q ss_pred             cCC--CeeEEEEcccCCC-C-C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCC-C-----CCeEEEECCccc
Q 021391          105 QGR--PLNILINNAGIMA-S-P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSS-R-----EGRIVNVSSEAH  173 (313)
Q Consensus       105 ~~g--~id~lv~~ag~~~-~-~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~-~-----~g~iv~isS~~~  173 (313)
                      .++  ++|+||||||+.. . + .+.+.+++++.+++|+.++++++++++|.|.+...+.. .     .++||++||..+
T Consensus        76 ~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~  155 (250)
T 1yo6_A           76 IVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG  155 (250)
T ss_dssp             HHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGG
T ss_pred             hcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCcc
Confidence            888  8999999999875 2 2 26778899999999999999999999999987411100 2     689999999988


Q ss_pred             cccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHH
Q 021391          174 RFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGK  253 (313)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~  253 (313)
                      ..+.+..        .....+...|++||++++.++++++.++++.|  |+||+|+||+++|++....            
T Consensus       156 ~~~~~~~--------~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~------------  213 (250)
T 1yo6_A          156 SITDNTS--------GSAQFPVLAYRMSKAAINMFGRTLAVDLKDDN--VLVVNFCPGWVQTNLGGKN------------  213 (250)
T ss_dssp             CSTTCCS--------TTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGT--CEEEEEECCCC--------------------
T ss_pred             ccCCccc--------ccccCCccHHHHHHHHHHHHHHHHHHHhccCC--eEEEEEcCCceecCCCCCC------------
Confidence            7654210        00112567899999999999999999999989  9999999999999986421            


Q ss_pred             hhcCChHHHHHHHHHHHccCCccCCCceeecCCcc
Q 021391          254 LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNI  288 (313)
Q Consensus       254 ~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~  288 (313)
                       ...+|+++|+.++++++ +...+++|+++..++.
T Consensus       214 -~~~~~~~~a~~~~~~~~-~~~~~~~G~~~~~~g~  246 (250)
T 1yo6_A          214 -AALTVEQSTAELISSFN-KLDNSHNGRFFMRNLK  246 (250)
T ss_dssp             ------HHHHHHHHHHHT-TCCGGGTTCEEETTEE
T ss_pred             -CCCCHHHHHHHHHHHHh-cccccCCCeEEEECCc
Confidence             24679999999999998 5567899999987765

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=5e-37  Score=273.22  Aligned_cols=220  Identities=25%  Similarity=0.275  Sum_probs=191.2

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      ...+++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++...  +.++.++.+|++|++++++++++
T Consensus        24 ~~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~  101 (272)
T 1yb1_A           24 KRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVVDCSNREDIYSSAKK  101 (272)
T ss_dssp             -CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CcccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc--CCeEEEEEeeCCCHHHHHHHHHH
Confidence            3457789999999999999999999999999999999999998888887777664  45789999999999999999999


Q ss_pred             HhhcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccC
Q 021391          102 YNSQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSE  179 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~  179 (313)
                      +.++++++|+||||||+....  .+.+.+++++.+++|+.+++++++.++|.|.+     .+.++||++||.++..+.+ 
T Consensus       102 ~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-----~~~~~iv~isS~~~~~~~~-  175 (272)
T 1yb1_A          102 VKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTK-----NNHGHIVTVASAAGHVSVP-  175 (272)
T ss_dssp             HHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHH-----TTCEEEEEECCCC-CCCHH-
T ss_pred             HHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-----cCCCEEEEEechhhcCCCC-
Confidence            999999999999999986542  25677899999999999999999999999987     4468999999999887665 


Q ss_pred             CCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhc---cCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhc
Q 021391          180 GIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLK---EDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVL  256 (313)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~---~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~  256 (313)
                                    +...|+++|++++.++++++.|+.   +.|  |+||+|+||+++|++....        ..+....
T Consensus       176 --------------~~~~Y~~sK~a~~~l~~~la~e~~~~~~~g--i~v~~v~Pg~v~t~~~~~~--------~~~~~~~  231 (272)
T 1yb1_A          176 --------------FLLAYCSSKFAAVGFHKTLTDELAALQITG--VKTTCLCPNFVNTGFIKNP--------STSLGPT  231 (272)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHHHHHTTCTT--EEEEEEEETHHHHCSTTCT--------HHHHCCC
T ss_pred             --------------CchhHHHHHHHHHHHHHHHHHHHHHhCCCC--eEEEEEeCCcccCCccccc--------cccccCC
Confidence                          678899999999999999999997   567  9999999999999986431        1123456


Q ss_pred             CChHHHHHHHHHHHccC
Q 021391          257 KNIPQGAATTCYVALHP  273 (313)
Q Consensus       257 ~~~~eva~~~~~l~~~~  273 (313)
                      .+|+|+|+.+++++.++
T Consensus       232 ~~~~dva~~i~~~~~~~  248 (272)
T 1yb1_A          232 LEPEEVVNRLMHGILTE  248 (272)
T ss_dssp             CCHHHHHHHHHHHHHTT
T ss_pred             CCHHHHHHHHHHHHHcC
Confidence            89999999999999844

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=8.1e-37  Score=278.54  Aligned_cols=191  Identities=23%  Similarity=0.282  Sum_probs=160.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecC-----chhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHH
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRN-----MAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFA   99 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~   99 (313)
                      |++++|++|||||++|||+++|++|+++|++|++++|+     .+.++.+.+.+...  +.++.++.+|++|++++++++
T Consensus         1 M~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~--~~~~~~~~~Dvtd~~~v~~~~   78 (324)
T 3u9l_A            1 MVMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDN--DVDLRTLELDVQSQVSVDRAI   78 (324)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHH--TCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHH
Confidence            56789999999999999999999999999999998876     34455555555444  567999999999999999999


Q ss_pred             HHHhhcCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccc
Q 021391          100 SEYNSQGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAY  177 (313)
Q Consensus       100 ~~~~~~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~  177 (313)
                      +++.+++|++|+||||||+.... . +.+.+++++.+++|+.|+++++++++|+|.++     +.|+||++||.++..+.
T Consensus        79 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~-----~~g~iV~isS~~~~~~~  153 (324)
T 3u9l_A           79 DQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQ-----KHGLLIWISSSSSAGGT  153 (324)
T ss_dssp             HHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCC
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCEEEEEecchhccCC
Confidence            99999999999999999987542 2 77899999999999999999999999999883     47899999999887443


Q ss_pred             cCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCc
Q 021391          178 SEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLF  238 (313)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~  238 (313)
                      +.              ....|++||+|+++++++++.|+++.|  |+||+|+||+++|++.
T Consensus       154 ~~--------------~~~~Y~asKaa~~~~~~~la~el~~~g--I~v~~v~PG~v~t~~~  198 (324)
T 3u9l_A          154 PP--------------YLAPYFAAKAAMDAIAVQYARELSRWG--IETSIIVPGAFTSGTN  198 (324)
T ss_dssp             CS--------------SCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECCC-----
T ss_pred             CC--------------cchhHHHHHHHHHHHHHHHHHHhhhhC--cEEEEEECCccccCch
Confidence            21              567899999999999999999999999  9999999999987653

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-36  Score=268.61  Aligned_cols=238  Identities=21%  Similarity=0.274  Sum_probs=194.0

Q ss_pred             hhccCCCCCCCEEEEeCCCCchHHHHHHHHHHcC---CEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHH
Q 021391           20 EVTQGIDGTGLTAIVTGASSGIGTETARVLALRG---VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVR   96 (313)
Q Consensus        20 ~~~~~~~~~gk~~lItGas~giG~aia~~La~~G---~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~   96 (313)
                      ......++++|++|||||++|||++++++|+++|   ++|++++|+.+..+.+ +++...  +.++.++.+|++|.++++
T Consensus        12 ~~~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~--~~~~~~~~~Dl~~~~~v~   88 (267)
T 1sny_A           12 SGLVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKN--HSNIHILEIDLRNFDAYD   88 (267)
T ss_dssp             --------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHH--CTTEEEEECCTTCGGGHH
T ss_pred             ccccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhcc--CCceEEEEecCCChHHHH
Confidence            3445566889999999999999999999999999   9999999998766643 445444  457999999999999999


Q ss_pred             HHHHHHhhcCC--CeeEEEEcccCCC-C-C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCC-C-----CCeE
Q 021391           97 KFASEYNSQGR--PLNILINNAGIMA-S-P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSS-R-----EGRI  165 (313)
Q Consensus        97 ~~~~~~~~~~g--~id~lv~~ag~~~-~-~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~-~-----~g~i  165 (313)
                      ++++++.+.++  ++|+||||||+.. . + .+.+.+++++.+++|+.++++++++++|.|.+...... .     .++|
T Consensus        89 ~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i  168 (267)
T 1sny_A           89 KLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAI  168 (267)
T ss_dssp             HHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEE
T ss_pred             HHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceE
Confidence            99999999888  8999999999875 2 2 26788999999999999999999999999987411100 1     5899


Q ss_pred             EEECCccccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhH
Q 021391          166 VNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILR  245 (313)
Q Consensus       166 v~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~  245 (313)
                      |++||..+..+.+.            ..+...|++||++++.++++++.+++++|  |+||+|+||+++|++....    
T Consensus       169 v~isS~~~~~~~~~------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~----  230 (267)
T 1sny_A          169 INMSSILGSIQGNT------------DGGMYAYRTSKSALNAATKSLSVDLYPQR--IMCVSLHPGWVKTDMGGSS----  230 (267)
T ss_dssp             EEECCGGGCSTTCC------------SCCCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEECCCSBCSTTTCTT----
T ss_pred             EEEecccccccCCC------------CCCchHHHHHHHHHHHHHHHHHHHhhcCC--cEEEEeCCcceecCCCCCC----
Confidence            99999988765321            11456799999999999999999999999  9999999999999986531    


Q ss_pred             hHHHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcc
Q 021391          246 GFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNI  288 (313)
Q Consensus       246 ~~~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~  288 (313)
                               ...+|+++|+.+++++. .....++|+++..+|.
T Consensus       231 ---------~~~~~~~~a~~~~~~~~-~~~~~~~G~~~~~~g~  263 (267)
T 1sny_A          231 ---------APLDVPTSTGQIVQTIS-KLGEKQNGGFVNYDGT  263 (267)
T ss_dssp             ---------CSBCHHHHHHHHHHHHH-HCCGGGTTCEECTTSC
T ss_pred             ---------CCCCHHHHHHHHHHHHH-hcCcCCCCcEEccCCc
Confidence                     24689999999999998 5677899999986654

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=4.5e-37  Score=280.65  Aligned_cols=233  Identities=20%  Similarity=0.186  Sum_probs=182.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHh----CCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKE----IPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~----~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      +||++|||||++|||+++|++|+++|++|++++|+.+..+...+.+...    .++.++.++.+|++|.++++++++++.
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            4799999999999999999999999999999888765544433333221    123578999999999999999999873


Q ss_pred             hcCCCeeEEEEcccCCCC-CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          104 SQGRPLNILINNAGIMAS-PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~-~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                        ++++|+||||||+... +. +.+.++|++.+++|+.++++++++++|.|.+.     ..++||++||.++..+.+   
T Consensus        81 --~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-----~~g~IV~isS~~~~~~~~---  150 (327)
T 1jtv_A           81 --EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRR-----GSGRVLVTGSVGGLMGLP---  150 (327)
T ss_dssp             --TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEEEEGGGTSCCT---
T ss_pred             --cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCEEEEECCcccccCCC---
Confidence              5899999999997643 22 67889999999999999999999999999873     368999999999887766   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccch------------hHh---
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI------------LRG---  246 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~------------~~~---  246 (313)
                                  ....|++||++++.|+++++.|++++|  |+||+|+||+++|++......            ...   
T Consensus       151 ------------~~~~Y~aSK~a~~~~~~~la~el~~~g--I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (327)
T 1jtv_A          151 ------------FNDVYCASKFALEGLCESLAVLLLPFG--VHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFY  216 (327)
T ss_dssp             ------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHH
T ss_pred             ------------CChHHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHH
Confidence                        677999999999999999999999999  999999999999998654210            000   


Q ss_pred             -HHHH--HHHhh-cCChHHHHHHHHHHHccC--CccCCCceeec
Q 021391          247 -FCNT--VGKLV-LKNIPQGAATTCYVALHP--QVQGVSGEYFS  284 (313)
Q Consensus       247 -~~~~--~~~~~-~~~~~eva~~~~~l~~~~--~~~~~tG~~~~  284 (313)
                       +...  .+..+ ..+|+|+|+.++++++++  ...+++|+.+.
T Consensus       217 ~~~~~~~~~~~~~~~~pedvA~~i~~l~~~~~~~~~~~tg~~~~  260 (327)
T 1jtv_A          217 QYLAHSKQVFREAAQNPEEVAEVFLTALRAPKPTLRYFTTERFL  260 (327)
T ss_dssp             HHHHHHHHHHHHHCBCHHHHHHHHHHHHHCSSCCSEEESCSTTH
T ss_pred             HHHHHHHHhhhhcCCCHHHHHHHHHHHHcCCCCCeEEEeCchHH
Confidence             1000  11123 358999999999999853  35678887543

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=1.1e-36  Score=284.49  Aligned_cols=254  Identities=14%  Similarity=0.032  Sum_probs=204.6

Q ss_pred             CCCCEEEEeCCCCchHHH--HHHHHHHcCCEEEEEecCchhH------------HHHHHHHHHhCCCCceEEEEccCCCH
Q 021391           27 GTGLTAIVTGASSGIGTE--TARVLALRGVHVIMAVRNMAAG------------KDVREAIVKEIPSAKVDAMELDVSSL   92 (313)
Q Consensus        27 ~~gk~~lItGas~giG~a--ia~~La~~G~~V~l~~r~~~~~------------~~~~~~l~~~~~~~~~~~~~~D~s~~   92 (313)
                      ..||++|||||++|||++  +++.|+++|++|++++|+....            +...+.+...  +.++.++.+|++|+
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~Dvtd~  135 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKK--GLVAKNFIEDAFSN  135 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTTCH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHc--CCcEEEEEeeCCCH
Confidence            689999999999999999  9999999999999999976432            2333333332  56789999999999


Q ss_pred             HHHHHHHHHHhhcCCCeeEEEEcccCC--------------CCCC----------------------ccCccchhhhhhh
Q 021391           93 ASVRKFASEYNSQGRPLNILINNAGIM--------------ASPF----------------------MLSKDNIELQFAT  136 (313)
Q Consensus        93 ~~v~~~~~~~~~~~g~id~lv~~ag~~--------------~~~~----------------------~~~~~~~~~~~~~  136 (313)
                      ++++++++++.+++|+||+||||||..              ..+.                      +.+.++|+.++++
T Consensus       136 ~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~v  215 (418)
T 4eue_A          136 ETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKV  215 (418)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHH
Confidence            999999999999999999999999974              1111                      3478899999999


Q ss_pred             hhhHHH-HHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCCCCCCcc--ccchHhHHHHHHHHHHHH
Q 021391          137 NHLGHF-LLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSF--GAYGQSKLANILHAKELA  213 (313)
Q Consensus       137 n~~~~~-~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~asK~a~~~l~~~la  213 (313)
                      |..+.+ .+++++.+.+..     .++|+||++||+++..+.|               .+  .+|++||+|+++|+++||
T Consensus       216 n~~~~~~~~~~~l~~~~~~-----~~gg~IV~iSSi~~~~~~p---------------~~~~~aY~ASKaAL~~ltrsLA  275 (418)
T 4eue_A          216 MGGEDWQEWCEELLYEDCF-----SDKATTIAYSYIGSPRTYK---------------IYREGTIGIAKKDLEDKAKLIN  275 (418)
T ss_dssp             HSSHHHHHHHHHHHHTTCE-----EEEEEEEEEECCCCGGGTT---------------TTTTSHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHhhh-----cCCcEEEEEeCchhcCCCC---------------ccccHHHHHHHHHHHHHHHHHH
Confidence            999988 777777765433     2368999999999888766               55  899999999999999999


Q ss_pred             HHhcc-CCCcEEEEEeeCcccccCCccccchhHhHH--HHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCC--cc
Q 021391          214 KHLKE-DGVNITANSLHPGSIVTNLFRYNGILRGFC--NTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDS--NI  288 (313)
Q Consensus       214 ~e~~~-~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~--~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~--~~  288 (313)
                      .|+++ +|  ||||+|+||+++|++....+....+.  ...+.++..++|++++.+.+|++ +  ...+|+.+..|  +.
T Consensus       276 ~ELa~~~G--IrVN~V~PG~v~T~~s~~ip~~p~y~~~~~~~mk~~G~~E~v~e~~~~L~s-d--~~~~g~~~~~D~~~~  350 (418)
T 4eue_A          276 EKLNRVIG--GRAFVSVNKALVTKASAYIPTFPLYAAILYKVMKEKNIHENCIMQIERMFS-E--KIYSNEKIQFDDKGR  350 (418)
T ss_dssp             HHHHHHHS--CEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHHHTTCCCCHHHHHHHHHH-H--TTSSSSCCCCCTTSC
T ss_pred             HHhCCccC--eEEEEEECCcCcChhhhcCCCCcHHHHHHHHHHhhcCChHHHHHHHHHHhh-c--cccCCCccccCCCce
Confidence            99999 99  99999999999999876553222111  12245567899999999999998 4  56789986654  57


Q ss_pred             cCCCccCCCHHHHH---HHHHH
Q 021391          289 YKPNSQGQNMELAK---KLWDF  307 (313)
Q Consensus       289 ~~~~~~~~~~~~~~---~~~~~  307 (313)
                      ....+++.+++.|+   ++|+.
T Consensus       351 ~r~d~~e~~~~~q~~~~~~~~~  372 (418)
T 4eue_A          351 LRMDDLELRKDVQDEVDRIWSN  372 (418)
T ss_dssp             EESCTTTTCHHHHHHHHHHHHH
T ss_pred             eeCChhhcCHHHHHHHHHHHHH
Confidence            78889999999986   45553

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2.6e-36  Score=263.14  Aligned_cols=228  Identities=23%  Similarity=0.204  Sum_probs=186.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      +|++|||||++|||++++++|+++|++|++++|+.+ .             .++.++.+|++|+++++++++++ +++++
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-------------~~~~~~~~D~~~~~~~~~~~~~~-~~~~~   66 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-------------EDLIYVEGDVTREEDVRRAVARA-QEEAP   66 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-------------SSSEEEECCTTCHHHHHHHHHHH-HHHSC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-------------cceEEEeCCCCCHHHHHHHHHHH-HhhCC
Confidence            689999999999999999999999999999999864 1             13578999999999999999999 78889


Q ss_pred             eeEEEEcccCCCCCC--ccCcc----chhhhhhhhhhHHHHHHHHHHHHHHHhhcc-CCCCCeEEEECCccccccccCCC
Q 021391          109 LNILINNAGIMASPF--MLSKD----NIELQFATNHLGHFLLTHLLLDTMKKTAQK-SSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       109 id~lv~~ag~~~~~~--~~~~~----~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      +|++|||||......  +.+.+    ++++.+++|+.+++++++++.|.|.+.... ....++||++||..+..+.+   
T Consensus        67 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---  143 (242)
T 1uay_A           67 LFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI---  143 (242)
T ss_dssp             EEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT---
T ss_pred             ceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC---
Confidence            999999999865422  33333    899999999999999999999999872100 01124999999999887655   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHHHHHH-hhcCC
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCNTVGK-LVLKN  258 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~~-~~~~~  258 (313)
                                  +...|++||++++.++++++.|++++|  |+||+|+||++.|++.....  +...+....+. .+..+
T Consensus       144 ------------~~~~Y~~sK~a~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (242)
T 1uay_A          144 ------------GQAAYAASKGGVVALTLPAARELAGWG--IRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGR  209 (242)
T ss_dssp             ------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCCC
T ss_pred             ------------CCchhhHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeccCcchhhhccchhHHHHHHhhCCCcccCCC
Confidence                        678999999999999999999999999  99999999999999865431  11112222233 45679


Q ss_pred             hHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          259 IPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       259 ~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      |+|+|+.++++++ +  .+++|+.+..+++...
T Consensus       210 ~~dva~~~~~l~~-~--~~~~G~~~~v~gG~~~  239 (242)
T 1uay_A          210 PEEYAALVLHILE-N--PMLNGEVVRLDGALRM  239 (242)
T ss_dssp             HHHHHHHHHHHHH-C--TTCCSCEEEESTTCCC
T ss_pred             HHHHHHHHHHHhc-C--CCCCCcEEEEcCCeec
Confidence            9999999999998 4  7899999998776543

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=3e-37  Score=271.84  Aligned_cols=230  Identities=17%  Similarity=0.152  Sum_probs=170.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      |++|||||++|||+++|++|+++|++|++++|+.++.+.              . +.+|+++.++++++++++   ++++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~--------------~-~~~Dl~~~~~v~~~~~~~---~~~i   63 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA--------------D-LSTAEGRKQAIADVLAKC---SKGM   63 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--------------C-TTSHHHHHHHHHHHHTTC---TTCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc--------------c-cccCCCCHHHHHHHHHHh---CCCC
Confidence            689999999999999999999999999999998754321              1 678999999998887743   3799


Q ss_pred             eEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCC----
Q 021391          110 NILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDK----  185 (313)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~----  185 (313)
                      |+||||||+...     .+.+++.+++|+.++++++++++|.|.+     +..++||++||.++........+..+    
T Consensus        64 d~lv~~Ag~~~~-----~~~~~~~~~~N~~g~~~l~~~~~~~~~~-----~~~g~iv~isS~~~~~~~~~~~~~~~~~~~  133 (257)
T 1fjh_A           64 DGLVLCAGLGPQ-----TKVLGNVVSVNYFGATELMDAFLPALKK-----GHQPAAVVISSVASAHLAFDKNPLALALEA  133 (257)
T ss_dssp             SEEEECCCCCTT-----CSSHHHHHHHHTHHHHHHHHHHHHHHHT-----SSSCEEEEECCGGGGSSCGGGCTTHHHHHH
T ss_pred             CEEEECCCCCCC-----cccHHHHHHHhhHHHHHHHHHHHHHHhh-----cCCcEEEEECChhhhccccccchhhhhhcc
Confidence            999999997542     2459999999999999999999999987     44689999999988732100000000    


Q ss_pred             --CC-------CCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-c--hhHhHHH--HH
Q 021391          186 --IN-------DESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-G--ILRGFCN--TV  251 (313)
Q Consensus       186 --~~-------~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-~--~~~~~~~--~~  251 (313)
                        .+       ...+.++...|++||++++.++++++.+++++|  |+||+|+||+++|++.... .  .......  ..
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~  211 (257)
T 1fjh_A          134 GEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAG--VRLNTIAPGATETPLLQAGLQDPRYGESIAKFVP  211 (257)
T ss_dssp             TCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTT--CEEEEEEECC---------------------CCC
T ss_pred             cchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEeeCCCCCccchhhccchhHHHHHHhccc
Confidence              00       001223567899999999999999999999999  9999999999999987643 1  1111111  12


Q ss_pred             HHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          252 GKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       252 ~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      +..+..+|+|+|+.++|+++ +.+.++||+++..+|+..
T Consensus       212 ~~~~~~~~~dvA~~~~~l~~-~~~~~~tG~~~~vdgG~~  249 (257)
T 1fjh_A          212 PMGRRAEPSEMASVIAFLMS-PAASYVHGAQIVIDGGID  249 (257)
T ss_dssp             STTSCCCTHHHHHHHHHHTS-GGGTTCCSCEEEESTTHH
T ss_pred             ccCCCCCHHHHHHHHHHHhC-chhcCCcCCEEEECCCcc
Confidence            33467899999999999998 677899999999887643

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=4.8e-35  Score=262.18  Aligned_cols=218  Identities=23%  Similarity=0.191  Sum_probs=185.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      .+++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++.... ..++.++.+|++|.++++++++++.+
T Consensus        24 ~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~  102 (286)
T 1xu9_A           24 EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG-AASAHYIAGTMEDMTFAEQFVAQAGK  102 (286)
T ss_dssp             GGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT-CSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC-CCceEEEeCCCCCHHHHHHHHHHHHH
Confidence            34789999999999999999999999999999999999998888877776652 34789999999999999999999999


Q ss_pred             cCCCeeEEEEc-ccCCCCCC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          105 QGRPLNILINN-AGIMASPF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       105 ~~g~id~lv~~-ag~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      ++|++|+|||| +|+...+. +.+.+++++.+++|+.+++++++++.|.|.+.      +++||++||.++..+.+    
T Consensus       103 ~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~------~g~iv~isS~~~~~~~~----  172 (286)
T 1xu9_A          103 LMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS------NGSIVVVSSLAGKVAYP----  172 (286)
T ss_dssp             HHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEEEEGGGTSCCT----
T ss_pred             HcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC------CCEEEEECCcccccCCC----
Confidence            99999999999 67654433 56789999999999999999999999998763      58999999999887766    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHh--ccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChH
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHL--KEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIP  260 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~--~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  260 (313)
                                 +...|++||++++.++++++.|+  ...|  |+|++|+||+++|++.....  ..    .......+|+
T Consensus       173 -----------~~~~Y~asK~a~~~~~~~l~~e~~~~~~~--i~v~~v~Pg~v~t~~~~~~~--~~----~~~~~~~~~~  233 (286)
T 1xu9_A          173 -----------MVAAYSASKFALDGFFSSIRKEYSVSRVN--VSITLCVLGLIDTETAMKAV--SG----IVHMQAAPKE  233 (286)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHHHHTCC--CEEEEEEECCBCCHHHHHHS--CG----GGGGGCBCHH
T ss_pred             -----------CccHHHHHHHHHHHHHHHHHHHHhhcCCC--eEEEEeecCccCChhHHHhc--cc----cccCCCCCHH
Confidence                       67899999999999999999999  4566  99999999999998754210  00    0122356899


Q ss_pred             HHHHHHHHHHcc
Q 021391          261 QGAATTCYVALH  272 (313)
Q Consensus       261 eva~~~~~l~~~  272 (313)
                      ++|+.++..+..
T Consensus       234 ~vA~~i~~~~~~  245 (286)
T 1xu9_A          234 ECALEIIKGGAL  245 (286)
T ss_dssp             HHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhc
Confidence            999999999873

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=100.00  E-value=6.8e-34  Score=299.81  Aligned_cols=241  Identities=17%  Similarity=0.124  Sum_probs=194.1

Q ss_pred             cCCCCCCCEEEEeCCCCc-hHHHHHHHHHHcCCEEEEE-ecCchhHHHHHHHHHHhCC--CCceEEEEccCCCHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSG-IGTETARVLALRGVHVIMA-VRNMAAGKDVREAIVKEIP--SAKVDAMELDVSSLASVRKF   98 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~g-iG~aia~~La~~G~~V~l~-~r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~s~~~~v~~~   98 (313)
                      +.|+++||++|||||++| ||+++|++|+++|++|+++ +|+.+.+++..+++....+  +.++.++.+|++|.++++++
T Consensus       669 ~~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~al  748 (1887)
T 2uv8_A          669 NGVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEAL  748 (1887)
T ss_dssp             TCBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHH
T ss_pred             ccCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHH
Confidence            566899999999999998 9999999999999999999 5788888777777755432  45789999999999999999


Q ss_pred             HHHHhhc-----CC-CeeEEEEcccCCCCC--C-ccC--ccchhhhhhhhhhHHHHHHHHH--HHHHHHhhccCCCCCeE
Q 021391           99 ASEYNSQ-----GR-PLNILINNAGIMASP--F-MLS--KDNIELQFATNHLGHFLLTHLL--LDTMKKTAQKSSREGRI  165 (313)
Q Consensus        99 ~~~~~~~-----~g-~id~lv~~ag~~~~~--~-~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~l~~~~~~~~~~g~i  165 (313)
                      ++++.++     +| +||+||||||+....  . +.+  .++|++++++|+.+++.+++.+  .|.|.+     +.+|+|
T Consensus       749 v~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~-----~~~G~I  823 (1887)
T 2uv8_A          749 IEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIET-----RPAQVI  823 (1887)
T ss_dssp             HHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCS-----CCEEEE
T ss_pred             HHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-----CCCCEE
Confidence            9999988     66 999999999987543  3 556  7899999999999999999988  677755     335899


Q ss_pred             EEECCccccccccCCCCCCCCCCCCCCCccccchHhHHHHHHH-HHHHHHHhccCCCcEEEEEeeCcccc-cCCccccch
Q 021391          166 VNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILH-AKELAKHLKEDGVNITANSLHPGSIV-TNLFRYNGI  243 (313)
Q Consensus       166 v~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l-~~~la~e~~~~g~~I~vn~i~PG~v~-t~~~~~~~~  243 (313)
                      |++||.++..+                 +...|++||+|+++| ++.++.++++.   |+||+|+||+++ |++......
T Consensus       824 VnISS~ag~~g-----------------g~~aYaASKAAL~~Lttr~lA~ela~~---IrVNaV~PG~V~tT~m~~~~~~  883 (1887)
T 2uv8_A          824 LPMSPNHGTFG-----------------GDGMYSESKLSLETLFNRWHSESWANQ---LTVCGAIIGWTRGTGLMSANNI  883 (1887)
T ss_dssp             EEECSCTTCSS-----------------CBTTHHHHHHHGGGHHHHHHHSSCTTT---EEEEEEEECCEECC-----CCT
T ss_pred             EEEcChHhccC-----------------CCchHHHHHHHHHHHHHHHHHHHhCCC---eEEEEEEecccccccccccchh
Confidence            99999988754                 356899999999999 99999998875   999999999999 888654322


Q ss_pred             hHhHHHHHHHhhcCChHHHHHHHHHHHccCC-ccCCCceeecC--CcccC
Q 021391          244 LRGFCNTVGKLVLKNIPQGAATTCYVALHPQ-VQGVSGEYFSD--SNIYK  290 (313)
Q Consensus       244 ~~~~~~~~~~~~~~~~~eva~~~~~l~~~~~-~~~~tG~~~~~--~~~~~  290 (313)
                      ........+. +..+|+|+|+.++||++ +. +.++||+.+.+  ||+..
T Consensus       884 ~~~~~~~~pl-r~~sPEEVA~avlfLaS-d~~as~iTGq~I~VDVDGG~~  931 (1887)
T 2uv8_A          884 IAEGIEKMGV-RTFSQKEMAFNLLGLLT-PEVVELCQKSPVMADLNGGLQ  931 (1887)
T ss_dssp             THHHHHTTSC-CCEEHHHHHHHHHGGGS-HHHHHHHHHSCEEEEESCSTT
T ss_pred             HHHHHHhcCC-CCCCHHHHHHHHHHHhC-CCccccccCcEEEEECCCCee
Confidence            2222222222 44589999999999998 55 78999998875  35543

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.5e-34  Score=294.49  Aligned_cols=242  Identities=17%  Similarity=0.107  Sum_probs=194.8

Q ss_pred             ccCCCCCCCEEEEeCCCCc-hHHHHHHHHHHcCCEEEEE-ecCchhHHHHHHHHHHhCC--CCceEEEEccCCCHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSG-IGTETARVLALRGVHVIMA-VRNMAAGKDVREAIVKEIP--SAKVDAMELDVSSLASVRK   97 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~g-iG~aia~~La~~G~~V~l~-~r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~s~~~~v~~   97 (313)
                      .+.|+++||++|||||++| ||+++|++|+++|++|+++ +|+.+.+++..+++.++.+  +.++.++.+|++|.+++++
T Consensus       469 ~~~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVea  548 (1688)
T 2pff_A          469 XXXVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEA  548 (1688)
T ss_dssp             SSCCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHH
T ss_pred             ccccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHH
Confidence            3567789999999999998 9999999999999999998 5777777777666654432  4578999999999999999


Q ss_pred             HHHHHhhc-----CC-CeeEEEEcccCCCCC--C-ccC--ccchhhhhhhhhhHHHHHHHHH--HHHHHHhhccCCCCCe
Q 021391           98 FASEYNSQ-----GR-PLNILINNAGIMASP--F-MLS--KDNIELQFATNHLGHFLLTHLL--LDTMKKTAQKSSREGR  164 (313)
Q Consensus        98 ~~~~~~~~-----~g-~id~lv~~ag~~~~~--~-~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~l~~~~~~~~~~g~  164 (313)
                      +++++.++     +| +||+||||||+....  . +.+  .++|++.+++|+.+++.+++.+  .|.|.+     ++.|+
T Consensus       549 LVe~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~k-----rggGr  623 (1688)
T 2pff_A          549 LIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIET-----RPAQV  623 (1688)
T ss_dssp             HHHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTT-----SCEEE
T ss_pred             HHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHh-----CCCCE
Confidence            99999988     77 899999999986543  2 555  7899999999999999999998  777765     33589


Q ss_pred             EEEECCccccccccCCCCCCCCCCCCCCCccccchHhHHHHHHH-HHHHHHHhccCCCcEEEEEeeCcccc-cCCccccc
Q 021391          165 IVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILH-AKELAKHLKEDGVNITANSLHPGSIV-TNLFRYNG  242 (313)
Q Consensus       165 iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l-~~~la~e~~~~g~~I~vn~i~PG~v~-t~~~~~~~  242 (313)
                      ||++||.++..+                 +..+|++||+|+++| ++.++.++++.   |+||+|+||+++ |++.....
T Consensus       624 IVnISSiAG~~G-----------------g~saYaASKAAL~aLttrsLAeEla~~---IRVNaVaPG~V~TT~M~~~~e  683 (1688)
T 2pff_A          624 ILPMSPNHGTFG-----------------GDGMYSESKLSLETLFNRWHSESWANQ---LTVCGAIIGWTRGTGLMSANN  683 (1688)
T ss_dssp             CCCCCSCTTTSS-----------------CBTTHHHHHHHHTHHHHHTTTSSCTTT---EECCCCCCCCCCCCSSSCTTT
T ss_pred             EEEEEChHhccC-----------------CchHHHHHHHHHHHHHHHHHHHHcCCC---eEEEEEEECcCcCCcccCCch
Confidence            999999988754                 356899999999998 78888888764   999999999999 78765321


Q ss_pred             hhHhHHHHHHHhhcCChHHHHHHHHHHHccCC-ccCCCceeecCC--cccC
Q 021391          243 ILRGFCNTVGKLVLKNIPQGAATTCYVALHPQ-VQGVSGEYFSDS--NIYK  290 (313)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~eva~~~~~l~~~~~-~~~~tG~~~~~~--~~~~  290 (313)
                      .........+. +..+|+|+|+.++||++ +. +.++||+.+..+  |+..
T Consensus       684 ~~~~~l~~ipl-R~~sPEEVA~aIlFLaS-d~sAs~ITGq~I~VDVDGG~~  732 (1688)
T 2pff_A          684 IIAEGIEKMGV-RTFSQKEMAFNLLGLLT-PEVVELCQKSPVMADLNGGLQ  732 (1688)
T ss_dssp             TCSTTTSSSSC-CCCCCCTTHHHHHHHTS-TTHHHHHTTSCCCCCCSCSGG
T ss_pred             HHHHHHHhCCC-CCCCHHHHHHHHHHHhC-CCccccccCcEEEEEcCCCee
Confidence            11111111121 34589999999999998 55 789999988754  5543

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=100.00  E-value=8.7e-33  Score=290.88  Aligned_cols=241  Identities=17%  Similarity=0.119  Sum_probs=193.6

Q ss_pred             ccCCCCCCCEEEEeCCCCc-hHHHHHHHHHHcCCEEEEEe-cCchhHHHHHHHHHHhCC--CCceEEEEccCCCHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSG-IGTETARVLALRGVHVIMAV-RNMAAGKDVREAIVKEIP--SAKVDAMELDVSSLASVRK   97 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~g-iG~aia~~La~~G~~V~l~~-r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~s~~~~v~~   97 (313)
                      .+.|+++||++|||||++| ||+++|++|+++|++|++++ |+.+.+++..+++..+..  +.++.++.||++|.+++++
T Consensus       645 ~~~m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~a  724 (1878)
T 2uv9_A          645 RSGLTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEA  724 (1878)
T ss_dssp             HHCBCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHH
T ss_pred             ccCCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHH
Confidence            3567899999999999999 99999999999999999995 667777776666654432  4578999999999999999


Q ss_pred             HHHHHhhc---CC-CeeEEEEcccCCCCC--C-ccC--ccchhhhhhhhhhHHHHHHHH--HHHHHHHhhccCCCCCeEE
Q 021391           98 FASEYNSQ---GR-PLNILINNAGIMASP--F-MLS--KDNIELQFATNHLGHFLLTHL--LLDTMKKTAQKSSREGRIV  166 (313)
Q Consensus        98 ~~~~~~~~---~g-~id~lv~~ag~~~~~--~-~~~--~~~~~~~~~~n~~~~~~l~~~--~~~~l~~~~~~~~~~g~iv  166 (313)
                      +++++.++   +| +||+||||||+....  . +.+  .++|++++++|+.+++.+++.  +.|.|.+     +..|+||
T Consensus       725 lv~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~-----~~~G~IV  799 (1878)
T 2uv9_A          725 LVNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYET-----RPAQVIL  799 (1878)
T ss_dssp             HHHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCS-----CCEEECC
T ss_pred             HHHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHh-----CCCCEEE
Confidence            99999998   88 999999999987543  2 566  789999999999999999987  6677655     3358999


Q ss_pred             EECCccccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHH-hccCCCcEEEEEeeCcccc-cCCccccchh
Q 021391          167 NVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKH-LKEDGVNITANSLHPGSIV-TNLFRYNGIL  244 (313)
Q Consensus       167 ~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e-~~~~g~~I~vn~i~PG~v~-t~~~~~~~~~  244 (313)
                      ++||.++..+                 +...|++||+++++|++.++.+ +++ +  |+||+|+||+++ |++.......
T Consensus       800 nISS~ag~~g-----------------g~~aYaASKAAL~aLt~~laAeEla~-~--IrVNaVaPG~V~gT~m~~~~~~~  859 (1878)
T 2uv9_A          800 PLSPNHGTFG-----------------NDGLYSESKLALETLFNRWYSESWGN-Y--LTICGAVIGWTRGTGLMSANNLV  859 (1878)
T ss_dssp             EECSCSSSSS-----------------CCSSHHHHHHHHTTHHHHHHHSTTTT-T--EEEEEEEECCBCCTTSCSHHHHT
T ss_pred             EEcchhhccC-----------------CchHHHHHHHHHHHHHHHHHHHHcCC-C--eEEEEEEecceecCcccccchhh
Confidence            9999988765                 3468999999999999877655 654 3  999999999999 9987642211


Q ss_pred             HhHHHHHHHhhcCChHHHHHHHHHHHccCCc-cCCCceeecC--Cccc
Q 021391          245 RGFCNTVGKLVLKNIPQGAATTCYVALHPQV-QGVSGEYFSD--SNIY  289 (313)
Q Consensus       245 ~~~~~~~~~~~~~~~~eva~~~~~l~~~~~~-~~~tG~~~~~--~~~~  289 (313)
                      .......+. +..+|+|+|+.++||++ +.+ .++||+.+..  ||+.
T Consensus       860 ~~~~~~~pl-r~~sPeEVA~avlfLaS-d~a~s~iTGq~I~VDVDGG~  905 (1878)
T 2uv9_A          860 AEGVEKLGV-RTFSQQEMAFNLLGLMA-PAIVNLCQSDPVFADLNGGL  905 (1878)
T ss_dssp             HHHHHTTTC-CCBCHHHHHHHHHHHHS-HHHHHHHTTSCEEEEESCSG
T ss_pred             HHHHHhcCC-CCCCHHHHHHHHHHHhC-CcccccccCcEEEEEcCCCc
Confidence            222222222 34589999999999998 665 8999998874  3543

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.98  E-value=2.5e-32  Score=231.85  Aligned_cols=196  Identities=15%  Similarity=0.203  Sum_probs=166.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCee
Q 021391           31 TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLN  110 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~id  110 (313)
                      ++|||||++|||++++++|+ +|++|++++|+.+                   .+.+|++++++++++++++    +++|
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-------------------~~~~D~~~~~~~~~~~~~~----~~~d   60 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-------------------DVTVDITNIDSIKKMYEQV----GKVD   60 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-------------------SEECCTTCHHHHHHHHHHH----CCEE
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-------------------ceeeecCCHHHHHHHHHHh----CCCC
Confidence            79999999999999999999 9999999999853                   4789999999999999876    7899


Q ss_pred             EEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCC
Q 021391          111 ILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIND  188 (313)
Q Consensus       111 ~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~  188 (313)
                      +||||||..... . +.+.+++++.+++|+.+++++++++.|.|.+       +++||++||..+..+.+          
T Consensus        61 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~~~iv~~sS~~~~~~~~----------  123 (202)
T 3d7l_A           61 AIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND-------KGSFTLTTGIMMEDPIV----------  123 (202)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE-------EEEEEEECCGGGTSCCT----------
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc-------CCEEEEEcchhhcCCCC----------
Confidence            999999976432 2 6678999999999999999999999998854       47999999998876655          


Q ss_pred             CCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHHHHHHHH
Q 021391          189 ESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGAATTCY  268 (313)
Q Consensus       189 ~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~eva~~~~~  268 (313)
                           +...|+++|++++.+++.++.|+ +.|  |++|+|+||++.|++....       ...+.....+++|+|+.+++
T Consensus       124 -----~~~~Y~~sK~~~~~~~~~~~~e~-~~g--i~v~~v~pg~v~~~~~~~~-------~~~~~~~~~~~~dva~~~~~  188 (202)
T 3d7l_A          124 -----QGASAAMANGAVTAFAKSAAIEM-PRG--IRINTVSPNVLEESWDKLE-------PFFEGFLPVPAAKVARAFEK  188 (202)
T ss_dssp             -----TCHHHHHHHHHHHHHHHHHTTSC-STT--CEEEEEEECCBGGGHHHHG-------GGSTTCCCBCHHHHHHHHHH
T ss_pred             -----ccHHHHHHHHHHHHHHHHHHHHc-cCC--eEEEEEecCccCCchhhhh-------hhccccCCCCHHHHHHHHHH
Confidence                 66789999999999999999999 778  9999999999999864211       11123446789999999988


Q ss_pred             HHccCCccCCCceeecCC
Q 021391          269 VALHPQVQGVSGEYFSDS  286 (313)
Q Consensus       269 l~~~~~~~~~tG~~~~~~  286 (313)
                      ++.    .+++|+.+..|
T Consensus       189 ~~~----~~~~G~~~~vd  202 (202)
T 3d7l_A          189 SVF----GAQTGESYQVY  202 (202)
T ss_dssp             HHH----SCCCSCEEEEC
T ss_pred             hhh----ccccCceEecC
Confidence            874    46889877653

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.98  E-value=1.6e-32  Score=240.69  Aligned_cols=230  Identities=20%  Similarity=0.157  Sum_probs=176.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      |++|||||+||||++++++|+++|++|++++|+.++.+           .    .+.+|+++.++++++++++   .+++
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------~----~~~~D~~~~~~~~~~~~~~---~~~~   63 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE-----------A----DLSTPGGRETAVAAVLDRC---GGVL   63 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-----------C----CTTSHHHHHHHHHHHHHHH---TTCC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc-----------c----cccCCcccHHHHHHHHHHc---CCCc
Confidence            68999999999999999999999999999999865432           1    1678999999999988865   4689


Q ss_pred             eEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCC----
Q 021391          110 NILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDK----  185 (313)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~----  185 (313)
                      |+||||||....     .+.++..+++|+.+++++++++.+.|.+     ...++||++||..+..+.+......+    
T Consensus        64 d~vi~~Ag~~~~-----~~~~~~~~~~N~~~~~~l~~~~~~~~~~-----~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~  133 (255)
T 2dkn_A           64 DGLVCCAGVGVT-----AANSGLVVAVNYFGVSALLDGLAEALSR-----GQQPAAVIVGSIAATQPGAAELPMVEAMLA  133 (255)
T ss_dssp             SEEEECCCCCTT-----SSCHHHHHHHHTHHHHHHHHHHHHHHHT-----SSSCEEEEECCGGGGSTTGGGCHHHHHHHH
T ss_pred             cEEEECCCCCCc-----chhHHHHHHHHhHHHHHHHHHHHHHhhh-----cCCceEEEEeccccccccccccchhhhhcc
Confidence            999999997532     3568999999999999999999999987     34689999999988754310000000    


Q ss_pred             CCCC-------CCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc---chhHhHHHHH--HH
Q 021391          186 INDE-------SAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN---GILRGFCNTV--GK  253 (313)
Q Consensus       186 ~~~~-------~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~---~~~~~~~~~~--~~  253 (313)
                      .++.       ...++...|++||++++.+++.++.++.+.|  |++++|+||.+.|++....   ..........  +.
T Consensus       134 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~g--i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~  211 (255)
T 2dkn_A          134 GDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRG--VRLNVVAPGAVETPLLQASKADPRYGESTRRFVAPL  211 (255)
T ss_dssp             TCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTT--CEEEEEEECCBCSHHHHHHHHCTTTHHHHHSCCCTT
T ss_pred             cchhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEcCCcccchhhhhcccchhhHHHHHHHHHHh
Confidence            0000       0012567899999999999999999999888  9999999999999875432   1111111111  33


Q ss_pred             hhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          254 LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       254 ~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      ....+++|+|++++++++ +...+++|+++..+++..
T Consensus       212 ~~~~~~~dva~~~~~l~~-~~~~~~~G~~~~v~gg~~  247 (255)
T 2dkn_A          212 GRGSEPREVAEAIAFLLG-PQASFIHGSVLFVDGGMD  247 (255)
T ss_dssp             SSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTHH
T ss_pred             cCCCCHHHHHHHHHHHhC-CCcccceeeEEEecCCeE
Confidence            456899999999999997 556789999988776544

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.97  E-value=1.9e-31  Score=226.99  Aligned_cols=198  Identities=18%  Similarity=0.223  Sum_probs=163.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      |++|||||++|||++++++|+++  +|++++|+.++.++..+++     ..  .++.+|++|++++++++++    ++++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~-----~~--~~~~~D~~~~~~~~~~~~~----~~~i   67 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREV-----GA--RALPADLADELEAKALLEE----AGPL   67 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHH-----TC--EECCCCTTSHHHHHHHHHH----HCSE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhc-----cC--cEEEeeCCCHHHHHHHHHh----cCCC
Confidence            68999999999999999999999  9999999987776665544     11  7889999999999999887    6799


Q ss_pred             eEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCC
Q 021391          110 NILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIN  187 (313)
Q Consensus       110 d~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  187 (313)
                      |+||||||..... . +.+.+++++.+++|+.+++++++++    .+     ...++||++||..+..+.+         
T Consensus        68 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~-----~~~~~iv~~sS~~~~~~~~---------  129 (207)
T 2yut_A           68 DLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHA----RF-----QKGARAVFFGAYPRYVQVP---------  129 (207)
T ss_dssp             EEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHC----CE-----EEEEEEEEECCCHHHHSST---------
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH----Hh-----cCCcEEEEEcChhhccCCC---------
Confidence            9999999976442 2 6688899999999999999999998    22     2257999999998877655         


Q ss_pred             CCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHHHHHHH
Q 021391          188 DESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGAATTC  267 (313)
Q Consensus       188 ~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~eva~~~~  267 (313)
                            +...|+++|++++.++++++.+++++|  |++++|+||++.|++.....        .+.....+|+|+|+.++
T Consensus       130 ------~~~~Y~~sK~a~~~~~~~~~~~~~~~g--i~v~~v~pg~v~t~~~~~~~--------~~~~~~~~~~dva~~~~  193 (207)
T 2yut_A          130 ------GFAAYAAAKGALEAYLEAARKELLREG--VHLVLVRLPAVATGLWAPLG--------GPPKGALSPEEAARKVL  193 (207)
T ss_dssp             ------TBHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEECCCCBCSGGGGGGT--------SCCTTCBCHHHHHHHHH
T ss_pred             ------CcchHHHHHHHHHHHHHHHHHHHhhhC--CEEEEEecCcccCCCccccC--------CCCCCCCCHHHHHHHHH
Confidence                  678999999999999999999999999  99999999999998743221        12245678999999999


Q ss_pred             HHHccCC
Q 021391          268 YVALHPQ  274 (313)
Q Consensus       268 ~l~~~~~  274 (313)
                      +++.++.
T Consensus       194 ~~~~~~~  200 (207)
T 2yut_A          194 EGLFREP  200 (207)
T ss_dssp             HHHC--C
T ss_pred             HHHhCCC
Confidence            9998543

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.97  E-value=8.1e-31  Score=252.93  Aligned_cols=216  Identities=16%  Similarity=0.102  Sum_probs=177.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCE-EEEE-ecC-------------chhHHHHHHHHHHhCCCCceEEEEccCCC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVH-VIMA-VRN-------------MAAGKDVREAIVKEIPSAKVDAMELDVSS   91 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~-V~l~-~r~-------------~~~~~~~~~~l~~~~~~~~~~~~~~D~s~   91 (313)
                      -+++++|||||++|||+++|+.|+++|++ |+++ +|+             .+..++..+++...  +.++.++.||++|
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dvtd  326 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADL--GATATVVTCDLTD  326 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHH--TCEEEEEECCTTS
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhc--CCEEEEEECCCCC
Confidence            36899999999999999999999999996 8888 898             35566777777765  6689999999999


Q ss_pred             HHHHHHHHHHHhhcCCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCC-CCeEEEE
Q 021391           92 LASVRKFASEYNSQGRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSR-EGRIVNV  168 (313)
Q Consensus        92 ~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~-~g~iv~i  168 (313)
                      .+++.++++++. ++++||+||||||+.....  +.+.+++++.+++|+.|++++.+.+.+.+.+     ++ .++||++
T Consensus       327 ~~~v~~~~~~i~-~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~-----~~~~~~iV~~  400 (525)
T 3qp9_A          327 AEAAARLLAGVS-DAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAA-----GGRPPVLVLF  400 (525)
T ss_dssp             HHHHHHHHHTSC-TTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC---------CCCEEEEE
T ss_pred             HHHHHHHHHHHH-hcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhcccccc-----CCCCCEEEEE
Confidence            999999999998 7899999999999876533  7889999999999999999999999999876     32 5799999


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHH
Q 021391          169 SSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFC  248 (313)
Q Consensus       169 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~  248 (313)
                      ||+++..+.+               ++..|+++|++++.|    +.+++.+|  |++|+|+||+++|+|.........+ 
T Consensus       401 SS~a~~~g~~---------------g~~~YaaaKa~l~~l----A~~~~~~g--i~v~sI~pG~~~tgm~~~~~~~~~~-  458 (525)
T 3qp9_A          401 SSVAAIWGGA---------------GQGAYAAGTAFLDAL----AGQHRADG--PTVTSVAWSPWEGSRVTEGATGERL-  458 (525)
T ss_dssp             EEGGGTTCCT---------------TCHHHHHHHHHHHHH----HTSCCSSC--CEEEEEEECCBTTSGGGSSHHHHHH-
T ss_pred             CCHHHcCCCC---------------CCHHHHHHHHHHHHH----HHHHHhCC--CCEEEEECCccccccccchhhHHHH-
Confidence            9999998877               788999999998886    56778888  9999999999999987543222111 


Q ss_pred             HHHHHhhcCChHHHHHHHHHHHccC
Q 021391          249 NTVGKLVLKNIPQGAATTCYVALHP  273 (313)
Q Consensus       249 ~~~~~~~~~~~~eva~~~~~l~~~~  273 (313)
                      .. ......+|+++++.+.+++.++
T Consensus       459 ~~-~g~~~l~pee~a~~l~~~l~~~  482 (525)
T 3qp9_A          459 RR-LGLRPLAPATALTALDTALGHG  482 (525)
T ss_dssp             HH-TTBCCBCHHHHHHHHHHHHHHT
T ss_pred             Hh-cCCCCCCHHHHHHHHHHHHhCC
Confidence            11 1123468999999999999854

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.96  E-value=7.7e-30  Score=280.44  Aligned_cols=241  Identities=17%  Similarity=0.091  Sum_probs=178.6

Q ss_pred             CCCCCEEEEeCCCCc-hHHHHHHHHHHcCCEEEEEecCchh-----HHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHH
Q 021391           26 DGTGLTAIVTGASSG-IGTETARVLALRGVHVIMAVRNMAA-----GKDVREAIVKEIPSAKVDAMELDVSSLASVRKFA   99 (313)
Q Consensus        26 ~~~gk~~lItGas~g-iG~aia~~La~~G~~V~l~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~   99 (313)
                      .++||++|||||++| ||+++|+.|+++|++|++++|+.+.     ++++.+++...  +.++..+.+|++|.+++++++
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~--G~~~~~v~~Dvtd~~~v~~lv 2210 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARF--DATLWVVPANMASYSDIDKLV 2210 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCT--TCEEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhc--CCeEEEEEecCCCHHHHHHHH
Confidence            489999999999999 9999999999999999999998766     44444444322  457889999999999999999


Q ss_pred             HHHhh----cCCCeeEEEEcccCC----CC---CCccCccchhhh----hhhhhhHHHHHHHHHHHHHHHhhccCCCCCe
Q 021391          100 SEYNS----QGRPLNILINNAGIM----AS---PFMLSKDNIELQ----FATNHLGHFLLTHLLLDTMKKTAQKSSREGR  164 (313)
Q Consensus       100 ~~~~~----~~g~id~lv~~ag~~----~~---~~~~~~~~~~~~----~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~  164 (313)
                      +++.+    .+|++|+||||||+.    ..   ..+.+.++|++.    +++|+.+++.+++.+.+.|.+.... .....
T Consensus      2211 ~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g-~~~~i 2289 (3089)
T 3zen_D         2211 EWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIA-SRLHV 2289 (3089)
T ss_dssp             HHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCC-CCEEE
T ss_pred             HHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-ceeEE
Confidence            99988    889999999999972    11   123456667766    9999999999999999999873200 00112


Q ss_pred             EEEECCccccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHH--hccCCCcEEEEEeeCcccc-cCCcccc
Q 021391          165 IVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKH--LKEDGVNITANSLHPGSIV-TNLFRYN  241 (313)
Q Consensus       165 iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e--~~~~g~~I~vn~i~PG~v~-t~~~~~~  241 (313)
                      |+.+++..+..+                 +..+|++||+|+++|+|+||.|  +++ +  |+||+|+||+|+ |++....
T Consensus      2290 i~~~ss~~g~~g-----------------~~~aYsASKaAl~~LtrslA~E~~~a~-~--IrVn~v~PG~v~tT~l~~~~ 2349 (3089)
T 3zen_D         2290 VLPGSPNRGMFG-----------------GDGAYGEAKSALDALENRWSAEKSWAE-R--VSLAHALIGWTKGTGLMGQN 2349 (3089)
T ss_dssp             EEEECSSTTSCS-----------------SCSSHHHHGGGHHHHHHHHHHCSTTTT-T--EEEEEEECCCEECSTTTTTT
T ss_pred             EEECCcccccCC-----------------CchHHHHHHHHHHHHHHHHHhccccCC-C--eEEEEEeecccCCCcccccc
Confidence            333333332211                 3458999999999999999999  664 5  999999999998 7765543


Q ss_pred             chhHhHHHHHHHhhcCChHHHHHHHHHHHccCCccCC-CceeecC--CcccCC
Q 021391          242 GILRGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGV-SGEYFSD--SNIYKP  291 (313)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~-tG~~~~~--~~~~~~  291 (313)
                      ..........+. +..+|+|+|..++||++ +.+.++ +|+.+..  +|+...
T Consensus      2350 ~~~~~~~~~~~~-r~~~PeEIA~avlfLaS-~~a~~~~~~~p~~vdl~GG~~~ 2400 (3089)
T 3zen_D         2350 DAIVSAVEEAGV-TTYTTDEMAAMLLDLCT-VETKVAAAGAPVKVDLTGGLGD 2400 (3089)
T ss_dssp             TTTHHHHGGGSC-BCEEHHHHHHHHHHTTS-HHHHHHHHHSCEEEECSBSCSS
T ss_pred             hhHHHHHHhcCC-CCCCHHHHHHHHHHHhC-hhhhhHhcCCeEEEEcCCCcCc
Confidence            222222222222 33489999999999998 666654 5554443  466543

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.96  E-value=1.6e-28  Score=234.58  Aligned_cols=210  Identities=18%  Similarity=0.214  Sum_probs=168.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCc---hhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNM---AAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      ++++|||||++|||+++|++|+++|+ +|++++|+.   +..++..+++...  +.++.++.||++|.+++.++++++.+
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~i~~  316 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQL--GVRVTIAACDAADREALAALLAELPE  316 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTCCT
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            59999999999999999999999999 899999964   3456666677665  66899999999999999999999877


Q ss_pred             cCCCeeEEEEcccCC-CC-CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          105 QGRPLNILINNAGIM-AS-PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       105 ~~g~id~lv~~ag~~-~~-~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      . +++|+||||||+. .. +. +.+.+++++.+++|+.+++++.+.+.+.         ..++||++||.++..+.+   
T Consensus       317 ~-g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~---------~~~~iV~~SS~a~~~g~~---  383 (496)
T 3mje_A          317 D-APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL---------DLDAFVLFSSGAAVWGSG---  383 (496)
T ss_dssp             T-SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS---------CCSEEEEEEEHHHHTTCT---
T ss_pred             h-CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc---------CCCEEEEEeChHhcCCCC---
Confidence            7 7899999999987 33 22 7889999999999999999999887654         256999999999998877   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-chhHhHHHHHHHhhcCChH
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-GILRGFCNTVGKLVLKNIP  260 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~  260 (313)
                                  ++..|+++|++++.|++    +++..|  |++|+|+||++.++..... .....+. . ......+|+
T Consensus       384 ------------g~~~YaAaKa~ldala~----~~~~~G--i~v~sV~pG~w~~~gm~~~~~~~~~l~-~-~g~~~l~pe  443 (496)
T 3mje_A          384 ------------GQPGYAAANAYLDALAE----HRRSLG--LTASSVAWGTWGEVGMATDPEVHDRLV-R-QGVLAMEPE  443 (496)
T ss_dssp             ------------TCHHHHHHHHHHHHHHH----HHHHTT--CCCEEEEECEESSSCC------CHHHH-H-TTEEEECHH
T ss_pred             ------------CcHHHHHHHHHHHHHHH----HHHhcC--CeEEEEECCcccCCccccChHHHHHHH-h-cCCCCCCHH
Confidence                        78899999999988766    455678  9999999999976543322 1111111 1 111235899


Q ss_pred             HHHHHHHHHHccC
Q 021391          261 QGAATTCYVALHP  273 (313)
Q Consensus       261 eva~~~~~l~~~~  273 (313)
                      ++++.+.+++.++
T Consensus       444 ~~~~~l~~~l~~~  456 (496)
T 3mje_A          444 HALGALDQMLEND  456 (496)
T ss_dssp             HHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHcCC
Confidence            9999999999744

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.95  E-value=7.5e-28  Score=242.45  Aligned_cols=214  Identities=18%  Similarity=0.236  Sum_probs=175.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHH-HcCC-EEEEEecC---chhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           28 TGLTAIVTGASSGIGTETARVLA-LRGV-HVIMAVRN---MAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La-~~G~-~V~l~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      .+|++|||||++|||+++|+.|+ ++|+ +|++++|+   .+..++..+++...  +.++.++.||++|.++++++++++
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--G~~v~~~~~Dvsd~~~v~~~~~~~  606 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAY--GAEVSLQACDVADRETLAKVLASI  606 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHH
Confidence            68999999999999999999999 7999 69999998   45677777777765  678999999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          103 NSQGRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      .+.+ +||+||||||+.....  +.+.++|++.+++|+.|++++.+++.|.|           +||++||.++..+.+  
T Consensus       607 ~~~~-~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l-----------~iV~~SS~ag~~g~~--  672 (795)
T 3slk_A          607 PDEH-PLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV-----------ALVLFSSVSGVLGSG--  672 (795)
T ss_dssp             CTTS-CEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-----------EEEEEEETHHHHTCS--
T ss_pred             HHhC-CCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-----------EEEEEccHHhcCCCC--
Confidence            8877 9999999999876533  78999999999999999999999985543           799999999999888  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHH--hhcCC
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGK--LVLKN  258 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~--~~~~~  258 (313)
                                   ++..|+++|+    |+++|+.+++.+|  |++|+|+||++.|+...... ..........  ....+
T Consensus       673 -------------g~~~YaAaka----~~~alA~~~~~~G--i~v~sI~pG~v~t~g~~~~~-~~~~~~~~~~~g~~~l~  732 (795)
T 3slk_A          673 -------------GQGNYAAANS----FLDALAQQRQSRG--LPTRSLAWGPWAEHGMASTL-REAEQDRLARSGLLPIS  732 (795)
T ss_dssp             -------------SCHHHHHHHH----HHHHHHHHHHHTT--CCEEEEEECCCSCCCHHHHH-HHHHHHHHHHTTBCCCC
T ss_pred             -------------CCHHHHHHHH----HHHHHHHHHHHcC--CeEEEEECCeECcchhhccc-cHHHHHHHHhcCCCCCC
Confidence                         7899999994    6777888888899  99999999999987543220 1111111111  23467


Q ss_pred             hHHHHHHHHHHHccCCccC
Q 021391          259 IPQGAATTCYVALHPQVQG  277 (313)
Q Consensus       259 ~~eva~~~~~l~~~~~~~~  277 (313)
                      ++++.+.+..++.++....
T Consensus       733 ~~e~~~~~~~~l~~~~~~~  751 (795)
T 3slk_A          733 TEEGLSQFDAACGGAHTVV  751 (795)
T ss_dssp             HHHHHHHHHHHHTSSCSSC
T ss_pred             HHHHHHHHHHHHhCCCcEE
Confidence            8899999988887555443

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.94  E-value=3.2e-26  Score=202.80  Aligned_cols=196  Identities=17%  Similarity=0.121  Sum_probs=157.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      |++|+||||||+||||++++++|+++|++|++++|+..+.+           +.++.++.+|++|.+++.++++      
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~------   63 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA-----------GPNEECVQCDLADANAVNAMVA------   63 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC-----------CTTEEEEECCTTCHHHHHHHHT------
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc-----------CCCCEEEEcCCCCHHHHHHHHc------
Confidence            35789999999999999999999999999999999875432           3478999999999999988887      


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                       ++|+||||||..      +.+.+++.+++|+.+++++++++.+         ...++||++||..+....+.   ...+
T Consensus        64 -~~D~vi~~Ag~~------~~~~~~~~~~~N~~g~~~l~~a~~~---------~~~~~iv~~SS~~~~g~~~~---~~~~  124 (267)
T 3rft_A           64 -GCDGIVHLGGIS------VEKPFEQILQGNIIGLYNLYEAARA---------HGQPRIVFASSNHTIGYYPQ---TERL  124 (267)
T ss_dssp             -TCSEEEECCSCC------SCCCHHHHHHHHTHHHHHHHHHHHH---------TTCCEEEEEEEGGGGTTSBT---TSCB
T ss_pred             -CCCEEEECCCCc------CcCCHHHHHHHHHHHHHHHHHHHHH---------cCCCEEEEEcchHHhCCCCC---CCCC
Confidence             689999999973      4567899999999999999999932         22579999999887744332   2234


Q ss_pred             CCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHHHHHH
Q 021391          187 NDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGAATT  266 (313)
Q Consensus       187 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~eva~~~  266 (313)
                      ++..+.++...|++||++.+.+++.++.++   |  +++++|.||.+.++......          ......++++++.+
T Consensus       125 ~e~~~~~~~~~Y~~sK~~~e~~~~~~a~~~---g--~~~~~vr~~~v~~~~~~~~~----------~~~~~~~~d~a~~~  189 (267)
T 3rft_A          125 GPDVPARPDGLYGVSKCFGENLARMYFDKF---G--QETALVRIGSCTPEPNNYRM----------LSTWFSHDDFVSLI  189 (267)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECBCSSSCCSTTH----------HHHBCCHHHHHHHH
T ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHh---C--CeEEEEEeecccCCCCCCCc----------eeeEEcHHHHHHHH
Confidence            455566677899999999999999999887   4  77788888888776543221          11245788899988


Q ss_pred             HHHHccC
Q 021391          267 CYVALHP  273 (313)
Q Consensus       267 ~~l~~~~  273 (313)
                      ..++..+
T Consensus       190 ~~~~~~~  196 (267)
T 3rft_A          190 EAVFRAP  196 (267)
T ss_dssp             HHHHHCS
T ss_pred             HHHHhCC
Confidence            8888744

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.94  E-value=2.7e-26  Score=219.57  Aligned_cols=212  Identities=20%  Similarity=0.217  Sum_probs=166.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCch---hHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMA---AGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      -.++++|||||+||||++++++|+++|+ +|++++|+..   ..++..+++...  +.++.++.||++|.+++.++++++
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dv~d~~~v~~~~~~i  301 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL--GARTTVAACDVTDRESVRELLGGI  301 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhc--CCEEEEEEeCCCCHHHHHHHHHHH
Confidence            3679999999999999999999999999 5999999875   455666666654  568999999999999999999998


Q ss_pred             hhcCCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          103 NSQGRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                       .+++++|+||||||+.....  +.+.+++++.+++|+.+++++.+.+.+.         ..++||++||.++..+.+  
T Consensus       302 -~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~---------~~~~~V~~SS~a~~~g~~--  369 (486)
T 2fr1_A          302 -GDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL---------DLTAFVLFSSFASAFGAP--  369 (486)
T ss_dssp             -CTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS---------CCSEEEEEEEHHHHTCCT--
T ss_pred             -HhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC---------CCCEEEEEcChHhcCCCC--
Confidence             56789999999999875532  6788999999999999999999877432         257999999999988776  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccC-CccccchhHhHHHHHHHhhcCCh
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTN-LFRYNGILRGFCNTVGKLVLKNI  259 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~  259 (313)
                                   ++..|+++|++++.|++    ++..+|  |++++|+||++.++ |..... ...+. . ......++
T Consensus       370 -------------g~~~Yaaaka~l~~la~----~~~~~g--i~v~~i~pG~~~~~gm~~~~~-~~~~~-~-~g~~~i~~  427 (486)
T 2fr1_A          370 -------------GLGGYAPGNAYLDGLAQ----QRRSDG--LPATAVAWGTWAGSGMAEGPV-ADRFR-R-HGVIEMPP  427 (486)
T ss_dssp             -------------TCTTTHHHHHHHHHHHH----HHHHTT--CCCEEEEECCBC-------------CT-T-TTEECBCH
T ss_pred             -------------CCHHHHHHHHHHHHHHH----HHHhcC--CeEEEEECCeeCCCcccchhH-HHHHH-h-cCCCCCCH
Confidence                         67899999999988755    445668  99999999999876 432210 00000 0 11235689


Q ss_pred             HHHHHHHHHHHccCC
Q 021391          260 PQGAATTCYVALHPQ  274 (313)
Q Consensus       260 ~eva~~~~~l~~~~~  274 (313)
                      +++++.+..++.++.
T Consensus       428 e~~a~~l~~~l~~~~  442 (486)
T 2fr1_A          428 ETACRALQNALDRAE  442 (486)
T ss_dssp             HHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHhCCC
Confidence            999999999997443

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.94  E-value=1.2e-26  Score=201.60  Aligned_cols=207  Identities=14%  Similarity=0.106  Sum_probs=152.4

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCce-EEEEccCCCHHHHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKV-DAMELDVSSLASVRKFAS  100 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~-~~~~~D~s~~~~v~~~~~  100 (313)
                      .+..+++||++|||||+|+||++++++|+++|++|++++|+.++.+...+        .++ .++.+|++         +
T Consensus        14 ~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~--------~~~~~~~~~Dl~---------~   76 (236)
T 3e8x_A           14 RENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE--------RGASDIVVANLE---------E   76 (236)
T ss_dssp             -------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH--------TTCSEEEECCTT---------S
T ss_pred             ccccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh--------CCCceEEEcccH---------H
Confidence            35566899999999999999999999999999999999999887665432        257 89999999         3


Q ss_pred             HHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          101 EYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       101 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      .+.+.++++|+||||||...      .++++..+++|+.++.++++++...         ..++||++||..+..+..  
T Consensus        77 ~~~~~~~~~D~vi~~ag~~~------~~~~~~~~~~n~~~~~~l~~a~~~~---------~~~~iv~~SS~~~~~~~~--  139 (236)
T 3e8x_A           77 DFSHAFASIDAVVFAAGSGP------HTGADKTILIDLWGAIKTIQEAEKR---------GIKRFIMVSSVGTVDPDQ--  139 (236)
T ss_dssp             CCGGGGTTCSEEEECCCCCT------TSCHHHHHHTTTHHHHHHHHHHHHH---------TCCEEEEECCTTCSCGGG--
T ss_pred             HHHHHHcCCCEEEECCCCCC------CCCccccchhhHHHHHHHHHHHHHc---------CCCEEEEEecCCCCCCCC--
Confidence            33445568999999999753      3678999999999999999998432         156999999966543320  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-chhHhHHHHHHHhhcCCh
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-GILRGFCNTVGKLVLKNI  259 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~  259 (313)
                               .+ .+...|+.+|++++.+++       ..|  |++++|+||.+.++..... .....   .........+
T Consensus       140 ---------~~-~~~~~Y~~sK~~~e~~~~-------~~g--i~~~~lrpg~v~~~~~~~~~~~~~~---~~~~~~~i~~  197 (236)
T 3e8x_A          140 ---------GP-MNMRHYLVAKRLADDELK-------RSS--LDYTIVRPGPLSNEESTGKVTVSPH---FSEITRSITR  197 (236)
T ss_dssp             ---------SC-GGGHHHHHHHHHHHHHHH-------HSS--SEEEEEEECSEECSCCCSEEEEESS---CSCCCCCEEH
T ss_pred             ---------Ch-hhhhhHHHHHHHHHHHHH-------HCC--CCEEEEeCCcccCCCCCCeEEeccC---CCcccCcEeH
Confidence                     00 256789999999998876       567  9999999999998865432 10000   0011335689


Q ss_pred             HHHHHHHHHHHccCCccCCCceeecCCc
Q 021391          260 PQGAATTCYVALHPQVQGVSGEYFSDSN  287 (313)
Q Consensus       260 ~eva~~~~~l~~~~~~~~~tG~~~~~~~  287 (313)
                      +|+|+++++++.++.   .+|+.+..++
T Consensus       198 ~Dva~~~~~~~~~~~---~~g~~~~v~~  222 (236)
T 3e8x_A          198 HDVAKVIAELVDQQH---TIGKTFEVLN  222 (236)
T ss_dssp             HHHHHHHHHHTTCGG---GTTEEEEEEE
T ss_pred             HHHHHHHHHHhcCcc---ccCCeEEEeC
Confidence            999999999998432   6687777644

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.93  E-value=2.2e-25  Score=214.28  Aligned_cols=208  Identities=20%  Similarity=0.215  Sum_probs=167.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCch---hHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMA---AGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .++++|||||++|||++++++|+++|+ +|++++|+..   ..++..+++...  +.++.++.||++|.+++.+++++  
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~--  333 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGH--GCEVVHAACDVAERDALAALVTA--  333 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTT--TCEEEEEECCSSCHHHHHHHHHH--
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhc--CCEEEEEEeCCCCHHHHHHHHhc--
Confidence            579999999999999999999999999 6999999864   355666666554  56899999999999999999886  


Q ss_pred             hcCCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          104 SQGRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                         +++|+||||||+.....  +.+.+.++..+++|+.+++++.+.+.+.        ...++||++||.++..+.+   
T Consensus       334 ---~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~--------~~~~~~V~~SS~a~~~g~~---  399 (511)
T 2z5l_A          334 ---YPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADI--------KGLDAFVLFSSVTGTWGNA---  399 (511)
T ss_dssp             ---SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC--------TTCCCEEEEEEGGGTTCCT---
T ss_pred             ---CCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc--------cCCCEEEEEeCHHhcCCCC---
Confidence               68999999999875532  6788999999999999999999876432        1257999999999988766   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCccc-ccCCccccchhHhHHHHHHHhhcCChH
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSI-VTNLFRYNGILRGFCNTVGKLVLKNIP  260 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~  260 (313)
                                  ++..|+++|++++.|++.+    ...|  |++++|+||++ +|+|..... ...+ .. ......+++
T Consensus       400 ------------g~~~YaaaKa~ld~la~~~----~~~g--i~v~sv~pG~~~~tgm~~~~~-~~~~-~~-~g~~~l~~e  458 (511)
T 2z5l_A          400 ------------GQGAYAAANAALDALAERR----RAAG--LPATSVAWGLWGGGGMAAGAG-EESL-SR-RGLRAMDPD  458 (511)
T ss_dssp             ------------TBHHHHHHHHHHHHHHHHH----HTTT--CCCEEEEECCBCSTTCCCCHH-HHHH-HH-HTBCCBCHH
T ss_pred             ------------CCHHHHHHHHHHHHHHHHH----HHcC--CcEEEEECCcccCCccccccc-HHHH-Hh-cCCCCCCHH
Confidence                        7789999999999988754    4567  99999999999 788765421 1111 11 122357899


Q ss_pred             HHHHHHHHHHccCC
Q 021391          261 QGAATTCYVALHPQ  274 (313)
Q Consensus       261 eva~~~~~l~~~~~  274 (313)
                      ++++.+..++.++.
T Consensus       459 ~~a~~l~~al~~~~  472 (511)
T 2z5l_A          459 AAVDALLGAMGRND  472 (511)
T ss_dssp             HHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHhCCC
Confidence            99999999997543

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.93  E-value=4.5e-24  Score=194.56  Aligned_cols=255  Identities=13%  Similarity=0.031  Sum_probs=189.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHH-HcCCEEEEEecCchh------------HHHHHHHHHHhCCCCceEEEEccCC
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLA-LRGVHVIMAVRNMAA------------GKDVREAIVKEIPSAKVDAMELDVS   90 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La-~~G~~V~l~~r~~~~------------~~~~~~~l~~~~~~~~~~~~~~D~s   90 (313)
                      .....+|+|||||||+|||++++..|| +.|+.|+++.+..+.            .....+.+.+.  +.+...+.||++
T Consensus        45 ~~~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~--G~~a~~i~~Dv~  122 (401)
T 4ggo_A           45 AGAKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKRE--GLYSVTIDGDAF  122 (401)
T ss_dssp             TTSCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHH--TCCEEEEESCTT
T ss_pred             cccCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHc--CCCceeEeCCCC
Confidence            345678999999999999999999999 789999999876532            23344455555  678999999999


Q ss_pred             CHHHHHHHHHHHhhcCCCeeEEEEcccCCCCCC-----------------------cc-------------Cccchh---
Q 021391           91 SLASVRKFASEYNSQGRPLNILINNAGIMASPF-----------------------ML-------------SKDNIE---  131 (313)
Q Consensus        91 ~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~-----------------------~~-------------~~~~~~---  131 (313)
                      ++++++++++++.+++|+||+|||+++......                       +.             +.++++   
T Consensus       123 d~e~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~  202 (401)
T 4ggo_A          123 SDEIKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATV  202 (401)
T ss_dssp             SHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHH
Confidence            999999999999999999999999999752100                       01             112223   


Q ss_pred             hhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHH
Q 021391          132 LQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKE  211 (313)
Q Consensus       132 ~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~  211 (313)
                      ..|....++.|...+...+.|.+       ++++|.+|+..+....|.            | ....++++|++++..+|.
T Consensus       203 ~vMg~s~~s~w~~al~~a~lla~-------G~siva~SYiGse~t~P~------------Y-~~G~mG~AKaaLEa~~r~  262 (401)
T 4ggo_A          203 KVMGGEDWERWIKQLSKEGLLEE-------GCITLAYSYIGPEATQAL------------Y-RKGTIGKAKEHLEATAHR  262 (401)
T ss_dssp             HHHSSHHHHHHHHHHHHTTCEEE-------EEEEEEEECCCCGGGHHH------------H-TTSHHHHHHHHHHHHHHH
T ss_pred             HHHhhhHHHHHHHHHHhhhcccC-------CceEEEEeccCcceeecC------------C-CccHHHHHHHHHHHHHHH
Confidence            34455666777778888777765       789999999888665551            0 224689999999999999


Q ss_pred             HHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHH---HHHHhhcCChHHHHHHHHHHHccCCccCCC-cee-ecCC
Q 021391          212 LAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCN---TVGKLVLKNIPQGAATTCYVALHPQVQGVS-GEY-FSDS  286 (313)
Q Consensus       212 la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~---~~~~~~~~~~~eva~~~~~l~~~~~~~~~t-G~~-~~~~  286 (313)
                      |+.++++    +++|+++||.+.|+.....+..+.+..   ++ ++...+-|...+.+..|.. + .-|-+ |.. ++..
T Consensus       263 La~eL~~----~~a~v~v~~a~vT~AssaIP~~ply~~~l~kv-mk~~g~heg~ieq~~rl~~-~-~ly~~~~~~~~D~~  335 (401)
T 4ggo_A          263 LNKENPS----IRAFVSVNKGLVTRASAVIPVIPLYLASLFKV-MKEKGNHEGCIEQITRLYA-E-RLYRKDGTIPVDEE  335 (401)
T ss_dssp             HHHHCTT----EEEEEEECCCCCCTTGGGSSSHHHHHHHHHHH-HHHHTCCCCHHHHHHHHHH-H-TTSCTTCCCCCCTT
T ss_pred             HHHhcCC----CcEEEEEcCccccchhhcCCCchHHHHHHHHH-HHhcCCCCchHHHHHHHHH-H-hhccCCCCCCcCCC
Confidence            9999985    899999999999998776654433322   22 2234567888899999986 2 23333 332 4455


Q ss_pred             cccCCCccCCCHHHHH---HHHHH
Q 021391          287 NIYKPNSQGQNMELAK---KLWDF  307 (313)
Q Consensus       287 ~~~~~~~~~~~~~~~~---~~~~~  307 (313)
                      |..+.-++..+++.|+   ++|+.
T Consensus       336 ~r~r~d~~el~~~vq~~v~~~~~~  359 (401)
T 4ggo_A          336 NRIRIDDWELEEDVQKAVSALMEK  359 (401)
T ss_dssp             SCEESCTTTTCHHHHHHHHHHHHH
T ss_pred             CCccCchhhcCHHHHHHHHHHHHH
Confidence            8888888999999985   56654

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.92  E-value=4.5e-24  Score=194.47  Aligned_cols=224  Identities=13%  Similarity=0.083  Sum_probs=163.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEE-EccCCCHHHHHHHHHHHh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAM-ELDVSSLASVRKFASEYN  103 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~-~~D~s~~~~v~~~~~~~~  103 (313)
                      ..+++|++|||||+|+||++++++|+++|++|++++|+.+..+.+.+.+.... +.++.++ .+|++|.+++.++++   
T Consensus         7 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~---   82 (342)
T 1y1p_A            7 VLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY-PGRFETAVVEDMLKQGAYDEVIK---   82 (342)
T ss_dssp             SSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS-TTTEEEEECSCTTSTTTTTTTTT---
T ss_pred             cCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccC-CCceEEEEecCCcChHHHHHHHc---
Confidence            34789999999999999999999999999999999999877666555554333 2468888 899999988766554   


Q ss_pred             hcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          104 SQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                          ++|+||||||.....     ++++..+++|+.++.++++++.+.        ...++||++||.++.........-
T Consensus        83 ----~~d~vih~A~~~~~~-----~~~~~~~~~n~~g~~~ll~~~~~~--------~~~~~iv~~SS~~~~~~~~~~~~~  145 (342)
T 1y1p_A           83 ----GAAGVAHIASVVSFS-----NKYDEVVTPAIGGTLNALRAAAAT--------PSVKRFVLTSSTVSALIPKPNVEG  145 (342)
T ss_dssp             ----TCSEEEECCCCCSCC-----SCHHHHHHHHHHHHHHHHHHHHTC--------TTCCEEEEECCGGGTCCCCTTCCC
T ss_pred             ----CCCEEEEeCCCCCCC-----CCHHHHHHHHHHHHHHHHHHHHhC--------CCCcEEEEeccHHHhcCCCCCCCC
Confidence                799999999975331     457789999999999999998652        124799999998775321100000


Q ss_pred             CCCCCCC----------------CCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc---hh
Q 021391          184 DKINDES----------------AYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG---IL  244 (313)
Q Consensus       184 ~~~~~~~----------------~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~---~~  244 (313)
                      ..+++..                +..+...|+.||++.+.+++.++.+++. +  +++++++||.+.++......   ..
T Consensus       146 ~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~--~~~~~~rp~~v~g~~~~~~~~~~~~  222 (342)
T 1y1p_A          146 IYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-H--FTLNAVLPNYTIGTIFDPETQSGST  222 (342)
T ss_dssp             CEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-S--SEEEEEEESEEECCCSCTTTCCCHH
T ss_pred             cccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-C--ceEEEEcCCceECCCCCCCCCCccH
Confidence            0111111                1235578999999999999999999875 6  99999999999988754321   12


Q ss_pred             HhHHHHH------------HHhhcCChHHHHHHHHHHHcc
Q 021391          245 RGFCNTV------------GKLVLKNIPQGAATTCYVALH  272 (313)
Q Consensus       245 ~~~~~~~------------~~~~~~~~~eva~~~~~l~~~  272 (313)
                      ..+....            .......++|+|+++++++.+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~  262 (342)
T 1y1p_A          223 SGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVL  262 (342)
T ss_dssp             HHHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHcCCCccccccCCcCCEeEHHHHHHHHHHHHcC
Confidence            2222111            112346789999999999874

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.92  E-value=1.8e-23  Score=191.04  Aligned_cols=232  Identities=16%  Similarity=0.152  Sum_probs=167.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc-hhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNM-AAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      |+||||||+|+||++++++|+++|++|++++|+. .......+.+..   ..++.++.+|++|.++++++++..     +
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~---~~~~~~~~~Dl~d~~~~~~~~~~~-----~   73 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS---LGNFEFVHGDIRNKNDVTRLITKY-----M   73 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT---TCCCEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc---CCceEEEEcCCCCHHHHHHHHhcc-----C
Confidence            6899999999999999999999999999999854 233333334432   236889999999999999988863     6


Q ss_pred             eeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC------
Q 021391          109 LNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR------  182 (313)
Q Consensus       109 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~------  182 (313)
                      +|+||||||....  ..+.++++..+++|+.++.++++++.+.+.        +++||++||.+.+.... ...      
T Consensus        74 ~d~vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~--------~~~iv~~SS~~v~g~~~-~~~~~e~~~  142 (347)
T 1orr_A           74 PDSCFHLAGQVAM--TTSIDNPCMDFEINVGGTLNLLEAVRQYNS--------NCNIIYSSTNKVYGDLE-QYKYNETET  142 (347)
T ss_dssp             CSEEEECCCCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT--------TCEEEEEEEGGGGTTCT-TSCEEECSS
T ss_pred             CCEEEECCcccCh--hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC--------CceEEEeccHHHhCCCC-cCCcccccc
Confidence            9999999996422  233457888999999999999999987642        36999999977553221 100      


Q ss_pred             -------CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc---chhHhHHHHH-
Q 021391          183 -------FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN---GILRGFCNTV-  251 (313)
Q Consensus       183 -------~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~---~~~~~~~~~~-  251 (313)
                             ...+++..+.++...|+.+|++.+.+++.++.++   |  |+++++.||.+.++.....   .+...+.... 
T Consensus       143 ~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~  217 (347)
T 1orr_A          143 RYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---G--LNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAV  217 (347)
T ss_dssp             CEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECCEECTTCCCBTTBCHHHHHHHHHH
T ss_pred             cccccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---C--CcEEEEccCceeCcCCCCCCcCcHHHHHHHHHH
Confidence                   0113334455567789999999999999999876   5  9999999999998875421   1222222111 


Q ss_pred             --------HHhh---------cCChHHHHHHHHHHHccCCccCCCceeecCCc
Q 021391          252 --------GKLV---------LKNIPQGAATTCYVALHPQVQGVSGEYFSDSN  287 (313)
Q Consensus       252 --------~~~~---------~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~  287 (313)
                              +...         +..++|+|+++++++..  ....+|+.+..++
T Consensus       218 ~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~--~~~~~g~~~~v~~  268 (347)
T 1orr_A          218 EIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALAN--VSKIRGNAFNIGG  268 (347)
T ss_dssp             HHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHT--HHHHTTCEEEESS
T ss_pred             hCcccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhc--cccCCCCEEEeCC
Confidence                    1111         33789999999999862  2345677666544

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.91  E-value=5.9e-24  Score=195.04  Aligned_cols=211  Identities=15%  Similarity=0.139  Sum_probs=163.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHc-CC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALR-GV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~-G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      +++|+||||||+|+||++++++|+++ |+ +|++++|+..+...+.+++.    ..++.++.+|++|.+++.++++    
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~----~~~v~~~~~Dl~d~~~l~~~~~----   90 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN----DPRMRFFIGDVRDLERLNYALE----   90 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC----CTTEEEEECCTTCHHHHHHHTT----
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc----CCCEEEEECCCCCHHHHHHHHh----
Confidence            78999999999999999999999999 98 99999999877666554442    3578999999999998877765    


Q ss_pred             cCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCC
Q 021391          105 QGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFD  184 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  184 (313)
                         ++|+||||||....+.  ........+++|+.++.++++++.+..         .++||++||..+..         
T Consensus        91 ---~~D~Vih~Aa~~~~~~--~~~~~~~~~~~Nv~gt~~l~~aa~~~~---------v~~~V~~SS~~~~~---------  147 (344)
T 2gn4_A           91 ---GVDICIHAAALKHVPI--AEYNPLECIKTNIMGASNVINACLKNA---------ISQVIALSTDKAAN---------  147 (344)
T ss_dssp             ---TCSEEEECCCCCCHHH--HHHSHHHHHHHHHHHHHHHHHHHHHTT---------CSEEEEECCGGGSS---------
T ss_pred             ---cCCEEEECCCCCCCCc--hhcCHHHHHHHHHHHHHHHHHHHHhCC---------CCEEEEecCCccCC---------
Confidence               6899999999754221  223456889999999999999997642         46999999976543         


Q ss_pred             CCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHH-----------
Q 021391          185 KINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGK-----------  253 (313)
Q Consensus       185 ~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~-----------  253 (313)
                               +...|++||++++.+++.++.++++.|  ++++++.||.+.++....   ...+......           
T Consensus       148 ---------p~~~Y~~sK~~~E~~~~~~~~~~~~~g--~~~~~vRpg~v~g~~~~~---i~~~~~~~~~g~~~~~i~~~~  213 (344)
T 2gn4_A          148 ---------PINLYGATKLCSDKLFVSANNFKGSSQ--TQFSVVRYGNVVGSRGSV---VPFFKKLVQNKASEIPITDIR  213 (344)
T ss_dssp             ---------CCSHHHHHHHHHHHHHHHGGGCCCSSC--CEEEEECCCEETTCTTSH---HHHHHHHHHHTCCCEEESCTT
T ss_pred             ---------CccHHHHHHHHHHHHHHHHHHHhCCCC--cEEEEEEeccEECCCCCH---HHHHHHHHHcCCCceEEeCCC
Confidence                     346899999999999999999888888  999999999998875321   1112111111           


Q ss_pred             --hhcCChHHHHHHHHHHHccCCccCCCceeecCC
Q 021391          254 --LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDS  286 (313)
Q Consensus       254 --~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~  286 (313)
                        ..+.+++|+|+++++++.++    ..|+.+..+
T Consensus       214 ~~r~~i~v~D~a~~v~~~l~~~----~~g~~~~~~  244 (344)
T 2gn4_A          214 MTRFWITLDEGVSFVLKSLKRM----HGGEIFVPK  244 (344)
T ss_dssp             CEEEEECHHHHHHHHHHHHHHC----CSSCEEEEC
T ss_pred             eEEeeEEHHHHHHHHHHHHhhc----cCCCEEecC
Confidence              12468899999999999743    246655543

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.91  E-value=1.1e-25  Score=195.73  Aligned_cols=193  Identities=13%  Similarity=0.020  Sum_probs=146.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      +.+++|++|||||+||||++++++|+++|+  +|++++|+.+..+...        ..++.++.+|++|++++.++++  
T Consensus        14 ~~m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~--   83 (242)
T 2bka_A           14 FRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA--------YKNVNQEVVDFEKLDDYASAFQ--   83 (242)
T ss_dssp             HHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG--------GGGCEEEECCGGGGGGGGGGGS--
T ss_pred             hhhcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc--------cCCceEEecCcCCHHHHHHHhc--
Confidence            346789999999999999999999999999  9999999876543211        1257889999999988776654  


Q ss_pred             hhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          103 NSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                           ++|+||||||....     .+.++..+++|+.++..+++++.    +     ...++||++||.++..+      
T Consensus        84 -----~~d~vi~~ag~~~~-----~~~~~~~~~~n~~~~~~~~~~~~----~-----~~~~~iv~~SS~~~~~~------  138 (242)
T 2bka_A           84 -----GHDVGFCCLGTTRG-----KAGAEGFVRVDRDYVLKSAELAK----A-----GGCKHFNLLSSKGADKS------  138 (242)
T ss_dssp             -----SCSEEEECCCCCHH-----HHHHHHHHHHHTHHHHHHHHHHH----H-----TTCCEEEEECCTTCCTT------
T ss_pred             -----CCCEEEECCCcccc-----cCCcccceeeeHHHHHHHHHHHH----H-----CCCCEEEEEccCcCCCC------
Confidence                 79999999996422     23467889999999999888754    3     22579999999876532      


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcE-EEEEeeCcccccCCccccchhHhHHHH----HH----H
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNI-TANSLHPGSIVTNLFRYNGILRGFCNT----VG----K  253 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I-~vn~i~PG~v~t~~~~~~~~~~~~~~~----~~----~  253 (313)
                                 +...|+++|++++.+++.+       +  + ++++|+||.+.|+..... ........    .+    .
T Consensus       139 -----------~~~~Y~~sK~~~e~~~~~~-------~--~~~~~~vrpg~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~  197 (242)
T 2bka_A          139 -----------SNFLYLQVKGEVEAKVEEL-------K--FDRYSVFRPGVLLCDRQESR-PGEWLVRKFFGSLPDSWAS  197 (242)
T ss_dssp             -----------CSSHHHHHHHHHHHHHHTT-------C--CSEEEEEECCEEECTTGGGS-HHHHHHHHHHCSCCTTGGG
T ss_pred             -----------CcchHHHHHHHHHHHHHhc-------C--CCCeEEEcCceecCCCCCCc-HHHHHHHHhhcccCccccC
Confidence                       3457999999999988763       4  6 799999999999865321 11111111    11    2


Q ss_pred             hhcCChHHHHHHHHHHHccC
Q 021391          254 LVLKNIPQGAATTCYVALHP  273 (313)
Q Consensus       254 ~~~~~~~eva~~~~~l~~~~  273 (313)
                      .+..+++|+|++++++++++
T Consensus       198 ~~~~~~~dva~~~~~~~~~~  217 (242)
T 2bka_A          198 GHSVPVVTVVRAMLNNVVRP  217 (242)
T ss_dssp             GTEEEHHHHHHHHHHHHTSC
T ss_pred             CcccCHHHHHHHHHHHHhCc
Confidence            34578999999999999844

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.91  E-value=1.1e-23  Score=190.74  Aligned_cols=224  Identities=17%  Similarity=0.171  Sum_probs=164.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      ..+.|++|||||+|+||++++++|+++|++|++++|+... +.    +       ++.++.+|++|.+++.++++.    
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l-------~~~~~~~Dl~d~~~~~~~~~~----   72 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P-------NVEMISLDIMDSQRVKKVISD----   72 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T-------TEEEEECCTTCHHHHHHHHHH----
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c-------eeeEEECCCCCHHHHHHHHHh----
Confidence            3456999999999999999999999999999999998654 21    1       578899999999999988876    


Q ss_pred             CCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCC
Q 021391          106 GRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDK  185 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  185 (313)
                       +++|+||||||....  ..+.++++..+++|+.++.++++++ +.+.       ..++||++||.+.+...+.  ....
T Consensus        73 -~~~d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~-------~~~~iv~~SS~~v~g~~~~--~~~~  139 (321)
T 2pk3_A           73 -IKPDYIFHLAAKSSV--KDSWLNKKGTFSTNVFGTLHVLDAV-RDSN-------LDCRILTIGSSEEYGMILP--EESP  139 (321)
T ss_dssp             -HCCSEEEECCSCCCH--HHHTTCHHHHHHHHHHHHHHHHHHH-HHHT-------CCCEEEEEEEGGGTBSCCG--GGCS
T ss_pred             -cCCCEEEEcCcccch--hhhhhcHHHHHHHHHHHHHHHHHHH-HHhC-------CCCeEEEEccHHhcCCCCC--CCCC
Confidence             379999999997532  2345678899999999999999999 5542       1579999999876543200  0112


Q ss_pred             CCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHH------------
Q 021391          186 INDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGK------------  253 (313)
Q Consensus       186 ~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~------------  253 (313)
                      +++..+.++...|+.+|++++.+++.++.++   |  ++++.+.||.+.++......+...+......            
T Consensus       140 ~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  214 (321)
T 2pk3_A          140 VSEENQLRPMSPYGVSKASVGMLARQYVKAY---G--MDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKV  214 (321)
T ss_dssp             BCTTSCCBCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEE
T ss_pred             CCCCCCCCCCCccHHHHHHHHHHHHHHHHHc---C--CCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEe
Confidence            3344455567789999999999999998875   5  9999999999998876543222222222111            


Q ss_pred             ------hhcCChHHHHHHHHHHHccCCccCCCceeecCCc
Q 021391          254 ------LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSN  287 (313)
Q Consensus       254 ------~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~  287 (313)
                            ..+..++|+|+++++++..+    .+|+.+..++
T Consensus       215 ~~~~~~~~~v~v~Dva~a~~~~~~~~----~~g~~~~i~~  250 (321)
T 2pk3_A          215 GNLEAVRDFTDVRDIVQAYWLLSQYG----KTGDVYNVCS  250 (321)
T ss_dssp             SCSSCEEEEEEHHHHHHHHHHHHHHC----CTTCEEEESC
T ss_pred             CCCCcEEeeEEHHHHHHHHHHHHhCC----CCCCeEEeCC
Confidence                  12457999999999999743    3566555443

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.91  E-value=1.2e-23  Score=191.95  Aligned_cols=224  Identities=14%  Similarity=0.084  Sum_probs=161.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      |++|++|||||+|+||++++++|+++|++|++++|+.+....  ..+.......++.++.+|++|.+++.++++.+    
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   74 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELGIENDVKIIHMDLLEFSNIIRTIEKV----   74 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH----
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhccccCceeEEECCCCCHHHHHHHHHhc----
Confidence            468999999999999999999999999999999998765431  11222112346889999999999999999876    


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                       ++|+||||||...  .+.+.++++..+++|+.++.++++++.+.  .      .+++||++||.+.+.... .   ..+
T Consensus        75 -~~d~vih~A~~~~--~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~--~------~~~~iv~~SS~~vyg~~~-~---~~~  139 (345)
T 2z1m_A           75 -QPDEVYNLAAQSF--VGVSFEQPILTAEVDAIGVLRILEALRTV--K------PDTKFYQASTSEMFGKVQ-E---IPQ  139 (345)
T ss_dssp             -CCSEEEECCCCCC--HHHHTTSHHHHHHHHTHHHHHHHHHHHHH--C------TTCEEEEEEEGGGGCSCS-S---SSB
T ss_pred             -CCCEEEECCCCcc--hhhhhhCHHHHHHHHHHHHHHHHHHHHHh--C------CCceEEEEechhhcCCCC-C---CCC
Confidence             7999999999752  23345678899999999999999999742  1      136999999986543221 1   123


Q ss_pred             CCCCCCCccccchHhHHHHHHHHHHHHHHhc---cCCCcEEEEEeeCcccccCCccccc-hhHhHHHH---------HHH
Q 021391          187 NDESAYNSFGAYGQSKLANILHAKELAKHLK---EDGVNITANSLHPGSIVTNLFRYNG-ILRGFCNT---------VGK  253 (313)
Q Consensus       187 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~---~~g~~I~vn~i~PG~v~t~~~~~~~-~~~~~~~~---------~~~  253 (313)
                      ++..+..+...|+.+|++.+.+++.++.+++   ..+  +.+|.+.||...|.+..... +.......         ...
T Consensus       140 ~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~--r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (345)
T 2z1m_A          140 TEKTPFYPRSPYAVAKLFGHWITVNYREAYNMFACSG--ILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNA  217 (345)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEE--EECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTC
T ss_pred             CccCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEee--eeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCc
Confidence            3444555677899999999999999999876   334  67888999988766422110 00000000         001


Q ss_pred             hh-cCChHHHHHHHHHHHccC
Q 021391          254 LV-LKNIPQGAATTCYVALHP  273 (313)
Q Consensus       254 ~~-~~~~~eva~~~~~l~~~~  273 (313)
                      .+ +..++|+|+++++++.++
T Consensus       218 ~~~~~~v~Dva~a~~~~~~~~  238 (345)
T 2z1m_A          218 KRDWGYAPEYVEAMWLMMQQP  238 (345)
T ss_dssp             EECCEEHHHHHHHHHHHHTSS
T ss_pred             eeeeEEHHHHHHHHHHHHhCC
Confidence            11 567899999999999743

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.91  E-value=2e-23  Score=190.08  Aligned_cols=227  Identities=14%  Similarity=0.074  Sum_probs=163.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcC--CEEEEEecCch--hHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRG--VHVIMAVRNMA--AGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G--~~V~l~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      +++++|||||+|+||++++++|+++|  ++|++++|+..  ..+.. +++.   ...++.++.+|++|.+++.+++.   
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~---~~~~~~~~~~Dl~d~~~~~~~~~---   74 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLE---DDPRYTFVKGDVADYELVKELVR---   74 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTT---TCTTEEEEECCTTCHHHHHHHHH---
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhc---cCCceEEEEcCCCCHHHHHHHhh---
Confidence            46789999999999999999999997  89999998642  12211 1111   13478899999999999888873   


Q ss_pred             hcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          104 SQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                          ++|+||||||...  .+.+.++++..+++|+.++.++++++.+.  .      ..++||++||.+.+....    .
T Consensus        75 ----~~d~vih~A~~~~--~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~--~------~~~~iv~~SS~~vyg~~~----~  136 (336)
T 2hun_A           75 ----KVDGVVHLAAESH--VDRSISSPEIFLHSNVIGTYTLLESIRRE--N------PEVRFVHVSTDEVYGDIL----K  136 (336)
T ss_dssp             ----TCSEEEECCCCCC--HHHHHHCTHHHHHHHHHHHHHHHHHHHHH--C------TTSEEEEEEEGGGGCCCS----S
T ss_pred             ----CCCEEEECCCCcC--hhhhhhCHHHHHHHHHHHHHHHHHHHHHh--C------CCcEEEEeccHHHHCCCC----C
Confidence                7999999999753  12344677889999999999999999876  1      136999999976543221    1


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHH----------
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGK----------  253 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~----------  253 (313)
                      ..+++..+..+...|+.+|++.+.+++.++.++   |  ++++.++||.+.++......+...+......          
T Consensus       137 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (336)
T 2hun_A          137 GSFTENDRLMPSSPYSATKAASDMLVLGWTRTY---N--LNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTG  211 (336)
T ss_dssp             SCBCTTBCCCCCSHHHHHHHHHHHHHHHHHHHT---T--CEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC-
T ss_pred             CCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---C--CCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCC
Confidence            123344455567789999999999999998875   5  9999999999998875432222222222111          


Q ss_pred             ---hhcCChHHHHHHHHHHHccCCccCCCceeecCCcc
Q 021391          254 ---LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNI  288 (313)
Q Consensus       254 ---~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~  288 (313)
                         .....++|+|+++++++..+    .+|+.+..++.
T Consensus       212 ~~~~~~i~v~Dva~~~~~~~~~~----~~g~~~~v~~~  245 (336)
T 2hun_A          212 KNVRDWLYVEDHVRAIELVLLKG----ESREIYNISAG  245 (336)
T ss_dssp             --CEEEEEHHHHHHHHHHHHHHC----CTTCEEEECCS
T ss_pred             CceeeeEEHHHHHHHHHHHHhCC----CCCCEEEeCCC
Confidence               12456899999999998732    36776665543

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.91  E-value=7.2e-24  Score=182.11  Aligned_cols=199  Identities=8%  Similarity=0.038  Sum_probs=142.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHH-HcCCEEEEEecCch-hHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           30 LTAIVTGASSGIGTETARVLA-LRGVHVIMAVRNMA-AGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La-~~G~~V~l~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      |++|||||+||||++++++|+ ++|++|++++|+.+ +++++.    ..  ..++.++.+|++|++++.++++       
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~--~~~~~~~~~D~~d~~~~~~~~~-------   72 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----ID--HERVTVIEGSFQNPGXLEQAVT-------   72 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HT--STTEEEEECCTTCHHHHHHHHT-------
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cC--CCceEEEECCCCCHHHHHHHHc-------
Confidence            789999999999999999999 89999999999977 555432    12  4578999999999999988876       


Q ss_pred             CeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCC
Q 021391          108 PLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIN  187 (313)
Q Consensus       108 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  187 (313)
                      ++|+||||+|..                 |+.     ++.+++.+.+     ...++||++||..+..+.+...     .
T Consensus        73 ~~d~vv~~ag~~-----------------n~~-----~~~~~~~~~~-----~~~~~iv~iSs~~~~~~~~~~~-----~  120 (221)
T 3r6d_A           73 NAEVVFVGAMES-----------------GSD-----MASIVKALSR-----XNIRRVIGVSMAGLSGEFPVAL-----E  120 (221)
T ss_dssp             TCSEEEESCCCC-----------------HHH-----HHHHHHHHHH-----TTCCEEEEEEETTTTSCSCHHH-----H
T ss_pred             CCCEEEEcCCCC-----------------Chh-----HHHHHHHHHh-----cCCCeEEEEeeceecCCCCccc-----c
Confidence            689999999853                 322     7888888887     3357999999988765433100     0


Q ss_pred             CCCCCCccc-cchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccC-CccccchhHhHHHHHHHhhcCChHHHHHH
Q 021391          188 DESAYNSFG-AYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTN-LFRYNGILRGFCNTVGKLVLKNIPQGAAT  265 (313)
Q Consensus       188 ~~~~~~~~~-~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~eva~~  265 (313)
                      ... ..... .|+.+|.+++.+++.       .|  |++++|+||++.++ ..........  .........+++|+|+.
T Consensus       121 ~~~-~~~~~~~y~~~K~~~e~~~~~-------~~--i~~~~vrpg~v~~~~~~~~~~~~~~--~~~~~~~~~~~~dvA~~  188 (221)
T 3r6d_A          121 KWT-FDNLPISYVQGERQARNVLRE-------SN--LNYTILRLTWLYNDPEXTDYELIPE--GAQFNDAQVSREAVVKA  188 (221)
T ss_dssp             HHH-HHTSCHHHHHHHHHHHHHHHH-------SC--SEEEEEEECEEECCTTCCCCEEECT--TSCCCCCEEEHHHHHHH
T ss_pred             ccc-ccccccHHHHHHHHHHHHHHh-------CC--CCEEEEechhhcCCCCCcceeeccC--CccCCCceeeHHHHHHH
Confidence            000 00011 799999999887753       56  99999999999887 3222211100  00011225678999999


Q ss_pred             HHHHH--ccCCccCCCceeecCC
Q 021391          266 TCYVA--LHPQVQGVSGEYFSDS  286 (313)
Q Consensus       266 ~~~l~--~~~~~~~~tG~~~~~~  286 (313)
                      +++++  + +...++++.+...+
T Consensus       189 ~~~l~~~~-~~~~~~~~~~~i~~  210 (221)
T 3r6d_A          189 IFDILHAA-DETPFHRTSIGVGE  210 (221)
T ss_dssp             HHHHHTCS-CCGGGTTEEEEEEC
T ss_pred             HHHHHHhc-ChhhhhcceeeecC
Confidence            99999  8 55667777655443

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.91  E-value=1.6e-23  Score=192.53  Aligned_cols=238  Identities=12%  Similarity=0.095  Sum_probs=167.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc-CCEEEEEecCch--hHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           31 TAIVTGASSGIGTETARVLALR-GVHVIMAVRNMA--AGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~-G~~V~l~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      ++|||||+|+||++++++|+++ |++|++++|+..  ..+.+ +++.   ...++.++.+|++|.+++.+++++.     
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~-----   72 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDIS---ESNRYNFEHADICDSAEITRIFEQY-----   72 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTT---TCTTEEEEECCTTCHHHHHHHHHHH-----
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhh---cCCCeEEEECCCCCHHHHHHHHhhc-----
Confidence            6999999999999999999998 799999998642  22221 1111   1347889999999999999988863     


Q ss_pred             CeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccC------CC
Q 021391          108 PLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSE------GI  181 (313)
Q Consensus       108 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~------~~  181 (313)
                      ++|+||||||...  .+.+.++++..+++|+.++.++++++.+.|.......+.+++||++||.+.....+.      ..
T Consensus        73 ~~d~vih~A~~~~--~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~  150 (361)
T 1kew_A           73 QPDAVMHLAAESH--VDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSV  150 (361)
T ss_dssp             CCSEEEECCSCCC--HHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTS
T ss_pred             CCCEEEECCCCcC--hhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccc
Confidence            7999999999753  123456788899999999999999999987531000001359999999765432110      00


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHH--------
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGK--------  253 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~--------  253 (313)
                      ++..+++..+.++...|+.+|++++.+++.++.++   |  ++++.++||.+.++......+...+......        
T Consensus       151 ~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g--i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (361)
T 1kew_A          151 TLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---G--LPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYG  225 (361)
T ss_dssp             CCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEET
T ss_pred             cCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---C--CcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcC
Confidence            01123344455677899999999999999999876   5  8999999999999876432222222222111        


Q ss_pred             -----hhcCChHHHHHHHHHHHccCCccCCCceeecCCcc
Q 021391          254 -----LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNI  288 (313)
Q Consensus       254 -----~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~  288 (313)
                           .....++|+|+++++++..+    .+|+.+..++.
T Consensus       226 ~~~~~~~~i~v~Dva~a~~~~~~~~----~~g~~~~v~~~  261 (361)
T 1kew_A          226 KGDQIRDWLYVEDHARALHMVVTEG----KAGETYNIGGH  261 (361)
T ss_dssp             TSCCEEEEEEHHHHHHHHHHHHHHC----CTTCEEEECCC
T ss_pred             CCceeEeeEEHHHHHHHHHHHHhCC----CCCCEEEecCC
Confidence                 12346899999999999732    46776665543

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.90  E-value=5.3e-23  Score=187.64  Aligned_cols=234  Identities=18%  Similarity=0.071  Sum_probs=167.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .+|+||||||+|+||++++++|+++|++|++++|+.+...+..+.+.... +.++.++.+|++|++++.+++++     +
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~-----~   77 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKIT-GKTPAFHETDVSDERALARIFDA-----H   77 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHH-SCCCEEECCCTTCHHHHHHHHHH-----S
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhc-CCCceEEEeecCCHHHHHHHHhc-----c
Confidence            56899999999999999999999999999999998777666666555432 34788999999999999999886     4


Q ss_pred             CeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCC
Q 021391          108 PLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIN  187 (313)
Q Consensus       108 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  187 (313)
                      ++|+||||||....  ....+.....+++|+.++.++++++.    +     ...++||++||.+.+. .+.   ...++
T Consensus        78 ~~d~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~----~-----~~~~~iv~~SS~~~~g-~~~---~~~~~  142 (341)
T 3enk_A           78 PITAAIHFAALKAV--GESVAKPIEYYRNNLDSLLSLLRVMR----E-----RAVKRIVFSSSATVYG-VPE---RSPID  142 (341)
T ss_dssp             CCCEEEECCCCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHH----H-----TTCCEEEEEEEGGGBC-SCS---SSSBC
T ss_pred             CCcEEEECcccccc--CccccChHHHHHHHHHHHHHHHHHHH----h-----CCCCEEEEEecceEec-CCC---CCCCC
Confidence            79999999997532  22334556789999999998877653    3     2246999999976652 221   12244


Q ss_pred             CCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccc----------cchhHhHHHHHHH----
Q 021391          188 DESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY----------NGILRGFCNTVGK----  253 (313)
Q Consensus       188 ~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~----------~~~~~~~~~~~~~----  253 (313)
                      +..+..+...|+.+|++.+.+++.++.++.  +  ++++.+.|+.+-.+....          ..+...+......    
T Consensus       143 e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~--~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  218 (341)
T 3enk_A          143 ETFPLSATNPYGQTKLMAEQILRDVEAADP--S--WRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEK  218 (341)
T ss_dssp             TTSCCBCSSHHHHHHHHHHHHHHHHHHHCT--T--CEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSC
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHhhcCC--C--ceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCc
Confidence            445556677899999999999999998875  4  889999999887663210          1111111111110    


Q ss_pred             ----------------hhcCChHHHHHHHHHHHccCCccCCCceeecCCc
Q 021391          254 ----------------LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSN  287 (313)
Q Consensus       254 ----------------~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~  287 (313)
                                      ..+..++|+|+++++++..+ .....|+.++.++
T Consensus       219 ~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~~ni~~  267 (341)
T 3enk_A          219 LRVFGSDYPTPDGTGVRDYIHVVDLARGHIAALDAL-ERRDASLTVNLGT  267 (341)
T ss_dssp             EEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHH-HHHTSCEEEEESC
T ss_pred             eEEeCCccCCCCCCeeEeeEEHHHHHHHHHHHHHhh-hcCCcceEEEeCC
Confidence                            01235699999999998732 1234566666543

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.90  E-value=3e-23  Score=190.45  Aligned_cols=235  Identities=11%  Similarity=0.070  Sum_probs=167.5

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCC---CCceEEEEccCCCHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIP---SAKVDAMELDVSSLASVRKFA   99 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~D~s~~~~v~~~~   99 (313)
                      ..+++++|++|||||+|+||++++++|+++|++|++++|+.....+..+.+.....   ..++.++.+|++|.+++.+++
T Consensus        21 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~  100 (352)
T 1sb8_A           21 KELPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC  100 (352)
T ss_dssp             HHHHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH
T ss_pred             hhcCccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHh
Confidence            34456789999999999999999999999999999999976432222222222211   246889999999999888877


Q ss_pred             HHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccC
Q 021391          100 SEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSE  179 (313)
Q Consensus       100 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~  179 (313)
                      +       ++|+||||||....  ..+.++++..+++|+.++.++++++.+.         ..+++|++||.....+.+.
T Consensus       101 ~-------~~d~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~~---------~~~~~v~~SS~~~~~~~~~  162 (352)
T 1sb8_A          101 A-------GVDYVLHQAALGSV--PRSINDPITSNATNIDGFLNMLIAARDA---------KVQSFTYAASSSTYGDHPG  162 (352)
T ss_dssp             T-------TCSEEEECCSCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHT---------TCSEEEEEEEGGGGTTCCC
T ss_pred             c-------CCCEEEECCcccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEeccHHhcCCCCC
Confidence            6       79999999996432  1234678889999999999999998642         1469999999877543321


Q ss_pred             CCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----chhHhHHHHHHHh-
Q 021391          180 GIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----GILRGFCNTVGKL-  254 (313)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~~~-  254 (313)
                          ..+++..+..+...|+.+|++.+.+++.++.++   |  ++++.+.||.+.++.....    .+...+....... 
T Consensus       163 ----~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g--~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  233 (352)
T 1sb8_A          163 ----LPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY---G--FSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGD  233 (352)
T ss_dssp             ----SSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTC
T ss_pred             ----CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---C--CCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCC
Confidence                123344444566789999999999999998876   5  8899999999988765432    2222222222111 


Q ss_pred             ------------hcCChHHHHHHHHHHHccCCccCCCceeecCC
Q 021391          255 ------------VLKNIPQGAATTCYVALHPQVQGVSGEYFSDS  286 (313)
Q Consensus       255 ------------~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~  286 (313)
                                  ....++|+|+++++++..+  ....|+.+...
T Consensus       234 ~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~--~~~~~~~~ni~  275 (352)
T 1sb8_A          234 DVYINGDGETSRDFCYIENTVQANLLAATAG--LDARNQVYNIA  275 (352)
T ss_dssp             CCEEESSSCCEECCEEHHHHHHHHHHHHTCC--GGGCSEEEEES
T ss_pred             CcEEeCCCCceEeeEEHHHHHHHHHHHHhcc--ccCCCceEEeC
Confidence                        2346899999999998732  23456655544

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.90  E-value=3.1e-23  Score=189.67  Aligned_cols=233  Identities=12%  Similarity=0.080  Sum_probs=160.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcC--CEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRG--VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      |.+++|+||||||+|+||++++++|+++|  ++|+..+|......  ...+.......++.++.+|++|.+++.++++..
T Consensus        20 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   97 (346)
T 4egb_A           20 FQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN--LNNVKSIQDHPNYYFVKGEIQNGELLEHVIKER   97 (346)
T ss_dssp             ----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC--GGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc--hhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhc
Confidence            45788999999999999999999999999  67888877542111  111111122357999999999999999999864


Q ss_pred             hhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          103 NSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                           ++|+|||+||....  ....+..+..+++|+.++.++++++...         ...++|++||...+...+   .
T Consensus        98 -----~~d~Vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~ll~a~~~~---------~~~~~v~~SS~~vy~~~~---~  158 (346)
T 4egb_A           98 -----DVQVIVNFAAESHV--DRSIENPIPFYDTNVIGTVTLLELVKKY---------PHIKLVQVSTDEVYGSLG---K  158 (346)
T ss_dssp             -----TCCEEEECCCCC-----------CHHHHHHTHHHHHHHHHHHHS---------TTSEEEEEEEGGGGCCCC---S
T ss_pred             -----CCCEEEECCcccch--hhhhhCHHHHHHHHHHHHHHHHHHHHhc---------CCCEEEEeCchHHhCCCC---c
Confidence                 69999999997543  2345677889999999999999988543         145899999986654332   1


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhh-------
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLV-------  255 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~-------  255 (313)
                      ...+++..+..+...|+.+|.+.+.+++.++.+.   |  ++++.+.||.+-++......+...+........       
T Consensus       159 ~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g--~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (346)
T 4egb_A          159 TGRFTEETPLAPNSPYSSSKASADMIALAYYKTY---Q--LPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGD  233 (346)
T ss_dssp             SCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETT
T ss_pred             CCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh---C--CCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCC
Confidence            1234445556677889999999999999998775   5  889999999998876543333333333222211       


Q ss_pred             ------cCChHHHHHHHHHHHccCCccCCCceeecCCc
Q 021391          256 ------LKNIPQGAATTCYVALHPQVQGVSGEYFSDSN  287 (313)
Q Consensus       256 ------~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~  287 (313)
                            +..++|+|+++++++.++.    .|+.+...+
T Consensus       234 ~~~~~~~i~v~Dva~a~~~~~~~~~----~g~~~~i~~  267 (346)
T 4egb_A          234 GLNVRDWLHVTDHCSAIDVVLHKGR----VGEVYNIGG  267 (346)
T ss_dssp             SCCEECEEEHHHHHHHHHHHHHHCC----TTCEEEECC
T ss_pred             CCeEEeeEEHHHHHHHHHHHHhcCC----CCCEEEECC
Confidence                  1347899999999997432    566555443

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.90  E-value=1.8e-23  Score=190.38  Aligned_cols=234  Identities=13%  Similarity=0.092  Sum_probs=156.3

Q ss_pred             CCCccchhccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHH
Q 021391           14 ASSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLA   93 (313)
Q Consensus        14 ~~~~~~~~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~   93 (313)
                      +.+..+...+..++++|++|||||+|+||++++++|+++|++|++++|+.....+..+.      -.++.++.+|++|.+
T Consensus         5 ~~~~~~~~~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------l~~v~~~~~Dl~d~~   78 (330)
T 2pzm_A            5 HHHHHHSSGLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPP------VAGLSVIEGSVTDAG   78 (330)
T ss_dssp             ---------CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCS------CTTEEEEECCTTCHH
T ss_pred             ccccccccCCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhc------cCCceEEEeeCCCHH
Confidence            34445566678889999999999999999999999999999999999975432211111      136889999999999


Q ss_pred             HHHHHHHHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391           94 SVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus        94 ~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                      ++.++++++     ++|+||||||.....   +.++++  +++|+.++.++++++...         ..++||++||.+.
T Consensus        79 ~~~~~~~~~-----~~D~vih~A~~~~~~---~~~~~~--~~~N~~~~~~l~~a~~~~---------~~~~iV~~SS~~~  139 (330)
T 2pzm_A           79 LLERAFDSF-----KPTHVVHSAAAYKDP---DDWAED--AATNVQGSINVAKAASKA---------GVKRLLNFQTALC  139 (330)
T ss_dssp             HHHHHHHHH-----CCSEEEECCCCCSCT---TCHHHH--HHHHTHHHHHHHHHHHHH---------TCSEEEEEEEGGG
T ss_pred             HHHHHHhhc-----CCCEEEECCccCCCc---cccChh--HHHHHHHHHHHHHHHHHc---------CCCEEEEecCHHH
Confidence            999998876     799999999976432   344555  999999999999998732         1469999999876


Q ss_pred             cccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEE-EEEeeCcccccCCccccchhHhHHHH--
Q 021391          174 RFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNIT-ANSLHPGSIVTNLFRYNGILRGFCNT--  250 (313)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~-vn~i~PG~v~t~~~~~~~~~~~~~~~--  250 (313)
                      ..... .. ...+++..  .+...|+.+|++++.+++.+  ++....  || ++.+.||. .+++...  +.......  
T Consensus       140 ~~~~~-~~-~~~~~E~~--~~~~~Y~~sK~~~e~~~~~~--~~~~~~--iR~~~v~gp~~-~~~~~~~--~~~~~~~~~~  208 (330)
T 2pzm_A          140 YGRPA-TV-PIPIDSPT--APFTSYGISKTAGEAFLMMS--DVPVVS--LRLANVTGPRL-AIGPIPT--FYKRLKAGQK  208 (330)
T ss_dssp             GCSCS-SS-SBCTTCCC--CCCSHHHHHHHHHHHHHHTC--SSCEEE--EEECEEECTTC-CSSHHHH--HHHHHHTTCC
T ss_pred             hCCCc-cC-CCCcCCCC--CCCChHHHHHHHHHHHHHHc--CCCEEE--EeeeeeECcCC-CCCHHHH--HHHHHHcCCE
Confidence            53321 10 00112222  35678999999999999887  444444  77 67777774 3332110  01111000  


Q ss_pred             H-H---HhhcCChHHHHH-HHHHHHccCCccCCCceeecCCcc
Q 021391          251 V-G---KLVLKNIPQGAA-TTCYVALHPQVQGVSGEYFSDSNI  288 (313)
Q Consensus       251 ~-~---~~~~~~~~eva~-~~~~l~~~~~~~~~tG~~~~~~~~  288 (313)
                      . .   ......++|+|+ ++++++..+  .   |..+..++.
T Consensus       209 ~~~~~~~~~~i~~~Dva~~a~~~~~~~~--~---g~~~~v~~~  246 (330)
T 2pzm_A          209 CFCSDTVRDFLDMSDFLAIADLSLQEGR--P---TGVFNVSTG  246 (330)
T ss_dssp             CCEESCEECEEEHHHHHHHHHHHTSTTC--C---CEEEEESCS
T ss_pred             EeCCCCEecceeHHHHHHHHHHHHhhcC--C---CCEEEeCCC
Confidence            0 0   123468899999 999999742  1   666665543

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.90  E-value=1.5e-22  Score=186.04  Aligned_cols=222  Identities=14%  Similarity=0.092  Sum_probs=165.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      +++|+||||||+|+||++++++|+++|++|++++|+.+......+.+.   ...++.++.+|++|++++.++++.+    
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~----   79 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR---VADGMQSEIGDIRDQNKLLESIREF----   79 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT---TTTTSEEEECCTTCHHHHHHHHHHH----
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc---cCCceEEEEccccCHHHHHHHHHhc----
Confidence            578999999999999999999999999999999998765544433322   1347889999999999999998876    


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                       ++|+||||||...  ...+.++++..+++|+.++.++++++.+.        +..++||++||...+.....   ...+
T Consensus        80 -~~d~vih~A~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--------~~~~~~v~~SS~~vyg~~~~---~~~~  145 (357)
T 1rkx_A           80 -QPEIVFHMAAQPL--VRLSYSEPVETYSTNVMGTVYLLEAIRHV--------GGVKAVVNITSDKCYDNKEW---IWGY  145 (357)
T ss_dssp             -CCSEEEECCSCCC--HHHHHHCHHHHHHHHTHHHHHHHHHHHHH--------CCCCEEEEECCGGGBCCCCS---SSCB
T ss_pred             -CCCEEEECCCCcc--cccchhCHHHHHHHHHHHHHHHHHHHHHh--------CCCCeEEEecCHHHhCCCCc---CCCC
Confidence             7999999999631  13345678889999999999999999753        12469999999876533211   0112


Q ss_pred             CCCCCCCccccchHhHHHHHHHHHHHHHHhc------cCCCcEEEEEeeCcccccCCccc-cchhHhHHHHHHH------
Q 021391          187 NDESAYNSFGAYGQSKLANILHAKELAKHLK------EDGVNITANSLHPGSIVTNLFRY-NGILRGFCNTVGK------  253 (313)
Q Consensus       187 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~------~~g~~I~vn~i~PG~v~t~~~~~-~~~~~~~~~~~~~------  253 (313)
                      .+..+..+...|+.+|.+.+.+++.++.++.      +.|  ++++.+.||.+.++.... ..+...+......      
T Consensus       146 ~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~g--i~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~  223 (357)
T 1rkx_A          146 RENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHG--TAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVII  223 (357)
T ss_dssp             CTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHC--CEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEEC
T ss_pred             CCCCCCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCC--ceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEE
Confidence            3333455677899999999999999999885      457  999999999998875422 1222323222111      


Q ss_pred             ------hhcCChHHHHHHHHHHHc
Q 021391          254 ------LVLKNIPQGAATTCYVAL  271 (313)
Q Consensus       254 ------~~~~~~~eva~~~~~l~~  271 (313)
                            ..+..++|+|++++.++.
T Consensus       224 ~~~~~~~~~v~v~Dva~a~~~~~~  247 (357)
T 1rkx_A          224 RNPHAIRPWQHVLEPLSGYLLLAQ  247 (357)
T ss_dssp             SCTTCEECCEETHHHHHHHHHHHH
T ss_pred             CCCCCeeccEeHHHHHHHHHHHHH
Confidence                  113567899999998886

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.89  E-value=7.7e-23  Score=186.49  Aligned_cols=232  Identities=19%  Similarity=0.143  Sum_probs=154.8

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCC--CCceEEEEccCCCHHHHHHHHHHH
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIP--SAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      |.+++|++|||||+|+||++++++|+++|++|+++.|+.+...... .+.. .+  ..++.++.+|++|.+++.++++  
T Consensus         1 ~~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~--   76 (337)
T 2c29_D            1 MGSQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVK-HLLD-LPKAETHLTLWKADLADEGSFDEAIK--   76 (337)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHH-HHHT-STTHHHHEEEEECCTTSTTTTHHHHT--
T ss_pred             CCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHH-HHHh-cccCCCeEEEEEcCCCCHHHHHHHHc--
Confidence            3457899999999999999999999999999999999876443322 1111 11  1258899999999998887765  


Q ss_pred             hhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          103 NSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                           ++|+|||+|+...  . ...+..+..+++|+.++.++++++.+..        ..++||++||.++..+.+....
T Consensus        77 -----~~d~Vih~A~~~~--~-~~~~~~~~~~~~nv~gt~~ll~a~~~~~--------~~~riV~~SS~~~~~~~~~~~~  140 (337)
T 2c29_D           77 -----GCTGVFHVATPMD--F-ESKDPENEVIKPTIEGMLGIMKSCAAAK--------TVRRLVFTSSAGTVNIQEHQLP  140 (337)
T ss_dssp             -----TCSEEEECCCCCC--S-SCSSHHHHTHHHHHHHHHHHHHHHHHHS--------CCCEEEEECCGGGTSCSSSCCS
T ss_pred             -----CCCEEEEeccccC--C-CCCChHHHHHHHHHHHHHHHHHHHHhCC--------CccEEEEeeeHhhcccCCCCCc
Confidence                 5899999998641  1 1223345689999999999999987642        1369999999886654321110


Q ss_pred             CCCCCCCCCC---------CccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-c-hhHhH----
Q 021391          183 FDKINDESAY---------NSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-G-ILRGF----  247 (313)
Q Consensus       183 ~~~~~~~~~~---------~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-~-~~~~~----  247 (313)
                        .+++....         ++...|+.||.+.+.+++.++.+   .|  |++++++||.+.+|..... . .....    
T Consensus       141 --~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g--i~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~  213 (337)
T 2c29_D          141 --VYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKE---NN--IDFITIIPTLVVGPFIMSSMPPSLITALSPI  213 (337)
T ss_dssp             --EECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---HT--CCEEEEEECEEESCCSCSSCCHHHHHHTHHH
T ss_pred             --ccCcccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHH---cC--CcEEEEeCCceECCCCCCCCCchHHHHHHHH
Confidence              01111110         12336999999999888776654   36  9999999999998864422 1 11000    


Q ss_pred             ------HHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCC
Q 021391          248 ------CNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDS  286 (313)
Q Consensus       248 ------~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~  286 (313)
                            .......++..++|+|+++++++.++   ..+|.++..+
T Consensus       214 ~g~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~---~~~~~~~~~~  255 (337)
T 2c29_D          214 TGNEAHYSIIRQGQFVHLDDLCNAHIYLFENP---KAEGRYICSS  255 (337)
T ss_dssp             HTCGGGHHHHTEEEEEEHHHHHHHHHHHHHCT---TCCEEEEECC
T ss_pred             cCCCccccccCCCCEEEHHHHHHHHHHHhcCc---ccCceEEEeC
Confidence                  01111123678999999999999743   3456665443

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.89  E-value=3.2e-23  Score=180.73  Aligned_cols=215  Identities=13%  Similarity=0.028  Sum_probs=151.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHc--CCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALR--GVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~--G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      +++|++|||||+|+||++++++|+++  |++|++++|+.++.++.         ..++.++.+|++|.+++.++++    
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~---------~~~~~~~~~D~~d~~~~~~~~~----   68 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI---------GGEADVFIGDITDADSINPAFQ----   68 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT---------TCCTTEEECCTTSHHHHHHHHT----
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc---------CCCeeEEEecCCCHHHHHHHHc----
Confidence            46799999999999999999999999  89999999987654322         2357789999999999888875    


Q ss_pred             cCCCeeEEEEcccCCCCC-----------CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          105 QGRPLNILINNAGIMASP-----------FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~-----------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                         ++|+||||+|.....           .+...+.++..+++|+.++.++++++...         ..++||++||..+
T Consensus        69 ---~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~iv~~SS~~~  136 (253)
T 1xq6_A           69 ---GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA---------GVKHIVVVGSMGG  136 (253)
T ss_dssp             ---TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH---------TCSEEEEEEETTT
T ss_pred             ---CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc---------CCCEEEEEcCccC
Confidence               589999999975321           12223445678899999999999887543         1469999999876


Q ss_pred             cccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHH--
Q 021391          174 RFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTV--  251 (313)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~--  251 (313)
                      ..+.++         ...| ....|+.+|++++.+++.       .|  |++++++||.+.++..............+  
T Consensus       137 ~~~~~~---------~~~~-~~~~y~~sK~~~e~~~~~-------~~--i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~  197 (253)
T 1xq6_A          137 TNPDHP---------LNKL-GNGNILVWKRKAEQYLAD-------SG--TPYTIIRAGGLLDKEGGVRELLVGKDDELLQ  197 (253)
T ss_dssp             TCTTCG---------GGGG-GGCCHHHHHHHHHHHHHT-------SS--SCEEEEEECEEECSCSSSSCEEEESTTGGGG
T ss_pred             CCCCCc---------cccc-cchhHHHHHHHHHHHHHh-------CC--CceEEEecceeecCCcchhhhhccCCcCCcC
Confidence            432110         0011 113477799999887753       56  99999999999887643211110000000  


Q ss_pred             HHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcc
Q 021391          252 GKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNI  288 (313)
Q Consensus       252 ~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~  288 (313)
                      .......++|+|+++++++.++.   .+|+.+..++.
T Consensus       198 ~~~~~~~~~Dva~~~~~~~~~~~---~~g~~~~i~~~  231 (253)
T 1xq6_A          198 TDTKTVPRADVAEVCIQALLFEE---AKNKAFDLGSK  231 (253)
T ss_dssp             SSCCEEEHHHHHHHHHHHTTCGG---GTTEEEEEEEC
T ss_pred             CCCcEEcHHHHHHHHHHHHcCcc---ccCCEEEecCC
Confidence            11235689999999999997432   36776665543

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.89  E-value=9.5e-23  Score=186.80  Aligned_cols=239  Identities=15%  Similarity=0.093  Sum_probs=172.8

Q ss_pred             chhccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCC---CceEEEEccCCCHHHH
Q 021391           19 EEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPS---AKVDAMELDVSSLASV   95 (313)
Q Consensus        19 ~~~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~---~~~~~~~~D~s~~~~v   95 (313)
                      +.....|.+++|+||||||+|+||++++++|+++|++|++++|+..........+....+.   .++.++.+|++|.+++
T Consensus        15 ~~~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~   94 (351)
T 3ruf_A           15 EEITQQLIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTC   94 (351)
T ss_dssp             HHHHHHHHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHH
T ss_pred             hhHHhhCCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHH
Confidence            4444566778999999999999999999999999999999999776555545554432211   4789999999999988


Q ss_pred             HHHHHHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccc
Q 021391           96 RKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRF  175 (313)
Q Consensus        96 ~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~  175 (313)
                      .++++       ++|+|||+||....  ....++....+++|+.++.++++++...         ...++|++||...+.
T Consensus        95 ~~~~~-------~~d~Vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~ll~a~~~~---------~~~~~v~~SS~~vyg  156 (351)
T 3ruf_A           95 EQVMK-------GVDHVLHQAALGSV--PRSIVDPITTNATNITGFLNILHAAKNA---------QVQSFTYAASSSTYG  156 (351)
T ss_dssp             HHHTT-------TCSEEEECCCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHT---------TCSEEEEEEEGGGGT
T ss_pred             HHHhc-------CCCEEEECCccCCc--chhhhCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEEecHHhcC
Confidence            77766       79999999996432  2344567788999999999999988543         135999999987654


Q ss_pred             cccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----chhHhHHHHH
Q 021391          176 AYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----GILRGFCNTV  251 (313)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----~~~~~~~~~~  251 (313)
                      ..+.    ..+++..+..+...|+.+|.+.+.+++.++.+.   |  ++++.+.|+.+-.+.....    .+...+....
T Consensus       157 ~~~~----~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g--~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~  227 (351)
T 3ruf_A          157 DHPA----LPKVEENIGNPLSPYAVTKYVNEIYAQVYARTY---G--FKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAM  227 (351)
T ss_dssp             TCCC----SSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCCEEEEECSEESTTCCCCSTTCCHHHHHHHHH
T ss_pred             CCCC----CCCccCCCCCCCChhHHHHHHHHHHHHHHHHHh---C--CCEEEEeeCceeCcCCCCCcchhhHHHHHHHHH
Confidence            3221    223444455667789999999999999998876   5  8889999999987754432    2223332222


Q ss_pred             HHh-------------hcCChHHHHHHHHHHHccCCccCCCceeecCC
Q 021391          252 GKL-------------VLKNIPQGAATTCYVALHPQVQGVSGEYFSDS  286 (313)
Q Consensus       252 ~~~-------------~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~  286 (313)
                      ...             .+..++|+|++++.++..+  ....|+.++..
T Consensus       228 ~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~--~~~~~~~~ni~  273 (351)
T 3ruf_A          228 LKGDDVYINGDGETSRDFCYIDNVIQMNILSALAK--DSAKDNIYNVA  273 (351)
T ss_dssp             HHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCC--GGGCSEEEEES
T ss_pred             HcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhhc--cccCCCEEEeC
Confidence            211             1235889999999998742  23445655543

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.89  E-value=2.6e-22  Score=183.27  Aligned_cols=223  Identities=17%  Similarity=0.103  Sum_probs=159.7

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcC-------CEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRG-------VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASV   95 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G-------~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v   95 (313)
                      .++.+++|++|||||+|+||++++++|+++|       ++|++++|+.+....        ....++.++.+|++|.+++
T Consensus         8 ~~~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~--------~~~~~~~~~~~Dl~d~~~~   79 (342)
T 2hrz_A            8 ENLYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA--------GFSGAVDARAADLSAPGEA   79 (342)
T ss_dssp             CCSCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT--------TCCSEEEEEECCTTSTTHH
T ss_pred             CCCCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc--------ccCCceeEEEcCCCCHHHH
Confidence            4456889999999999999999999999999       899999998643321        0145788999999999998


Q ss_pred             HHHHHHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccc
Q 021391           96 RKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRF  175 (313)
Q Consensus        96 ~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~  175 (313)
                      .++++      +++|+||||||...   ..+.++++..+++|+.++.++++++.+...+.    ...++||++||.+.+.
T Consensus        80 ~~~~~------~~~d~vih~A~~~~---~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~----~~~~~iv~~SS~~~~~  146 (342)
T 2hrz_A           80 EKLVE------ARPDVIFHLAAIVS---GEAELDFDKGYRINLDGTRYLFDAIRIANGKD----GYKPRVVFTSSIAVFG  146 (342)
T ss_dssp             HHHHH------TCCSEEEECCCCCH---HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHH----CCCCEEEEEEEGGGCC
T ss_pred             HHHHh------cCCCEEEECCccCc---ccccccHHHHHHHHHHHHHHHHHHHHhccccc----CCCcEEEEeCchHhhC
Confidence            88775      37999999999653   12456788999999999999999998754321    1146999999987654


Q ss_pred             cccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEee--CcccccCCccccchhHhHHHHHHH
Q 021391          176 AYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLH--PGSIVTNLFRYNGILRGFCNTVGK  253 (313)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~--PG~v~t~~~~~~~~~~~~~~~~~~  253 (313)
                      +..    ...++++.+..+...|+.+|++++.+++.++.+..-....||++.+.  ||...++..   .+...+......
T Consensus       147 ~~~----~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~---~~~~~~~~~~~~  219 (342)
T 2hrz_A          147 APL----PYPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAAS---GFFSNILREPLV  219 (342)
T ss_dssp             SSC----CSSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGG---GHHHHHHHHHHT
T ss_pred             CCC----CCCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhH---HHHHHHHHHHhc
Confidence            321    12244455555677899999999999999887643222237777777  887654421   112222211111


Q ss_pred             -------------hhcCChHHHHHHHHHHHccC
Q 021391          254 -------------LVLKNIPQGAATTCYVALHP  273 (313)
Q Consensus       254 -------------~~~~~~~eva~~~~~l~~~~  273 (313)
                                   .....++|+|++++.++..+
T Consensus       220 ~~~~~~~~~~~~~~~~~~v~Dva~~~~~~~~~~  252 (342)
T 2hrz_A          220 GQEAVLPVPESIRHWHASPRSAVGFLIHGAMID  252 (342)
T ss_dssp             TCCEEECSCTTCEEEEECHHHHHHHHHHHHHSC
T ss_pred             CCCeeccCCCccceeeEehHHHHHHHHHHHhcc
Confidence                         11347899999999998744

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.89  E-value=1e-22  Score=187.57  Aligned_cols=226  Identities=13%  Similarity=0.070  Sum_probs=153.0

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHH--cCCEEEEEecCchhHHHHHH---HH--HHhCCCCceEEEEccCCCHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLAL--RGVHVIMAVRNMAAGKDVRE---AI--VKEIPSAKVDAMELDVSSLASV   95 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~--~G~~V~l~~r~~~~~~~~~~---~l--~~~~~~~~~~~~~~D~s~~~~v   95 (313)
                      +.|++++|+||||||+|+||++++++|++  +|++|++++|+.........   .+  .....+.++.++.+|++|++++
T Consensus         4 ~~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~   83 (362)
T 3sxp_A            4 IDDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDL   83 (362)
T ss_dssp             SSCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHH
T ss_pred             cchhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHH
Confidence            35678999999999999999999999999  99999999997642110000   00  0011244678999999999988


Q ss_pred             HHHHHHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccc
Q 021391           96 RKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRF  175 (313)
Q Consensus        96 ~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~  175 (313)
                      +++      ...++|+||||||...    .+.+.++..+++|+.++.++++++...          +++||++||.+.+.
T Consensus        84 ~~~------~~~~~D~vih~A~~~~----~~~~~~~~~~~~Nv~gt~~ll~aa~~~----------~~~~V~~SS~~vyg  143 (362)
T 3sxp_A           84 RRL------EKLHFDYLFHQAAVSD----TTMLNQELVMKTNYQAFLNLLEIARSK----------KAKVIYASSAGVYG  143 (362)
T ss_dssp             HHH------TTSCCSEEEECCCCCG----GGCCCHHHHHHHHTHHHHHHHHHHHHT----------TCEEEEEEEGGGGC
T ss_pred             HHh------hccCCCEEEECCccCC----ccccCHHHHHHHHHHHHHHHHHHHHHc----------CCcEEEeCcHHHhC
Confidence            776      2348999999999543    256788999999999999999998321          45699999965443


Q ss_pred             cccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----chhHhHHHHH
Q 021391          176 AYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----GILRGFCNTV  251 (313)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----~~~~~~~~~~  251 (313)
                      ..+ .    .+++..+..+...|+.+|++.+.+++.++.++       ++..|.|+.+-.|.....    .+...+....
T Consensus       144 ~~~-~----~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-------~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~  211 (362)
T 3sxp_A          144 NTK-A----PNVVGKNESPENVYGFSKLCMDEFVLSHSNDN-------VQVGLRYFNVYGPREFYKEKTASMVLQLALGA  211 (362)
T ss_dssp             SCC-S----SBCTTSCCCCSSHHHHHHHHHHHHHHHTTTTS-------CEEEEEECSEESTTCGGGGGGSCHHHHHHHHH
T ss_pred             CCC-C----CCCCCCCCCCCChhHHHHHHHHHHHHHHhccC-------CEEEEEeCceeCcCCCCCCcchhHHHHHHHHH
Confidence            222 1    33444455667789999999999999887663       334455555544432211    1222222221


Q ss_pred             HHh-------------hcCChHHHHHHHHHHHccCCccCCCceeecC
Q 021391          252 GKL-------------VLKNIPQGAATTCYVALHPQVQGVSGEYFSD  285 (313)
Q Consensus       252 ~~~-------------~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~  285 (313)
                      ...             .+..++|+|+++++++..+    .+| .+..
T Consensus       212 ~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~----~~g-~~~i  253 (362)
T 3sxp_A          212 MAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQ----KSG-VYNV  253 (362)
T ss_dssp             HTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTCS----SCE-EEEE
T ss_pred             HhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhcC----CCC-EEEe
Confidence            111             1345899999999999743    257 4444

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.89  E-value=1.4e-22  Score=182.63  Aligned_cols=220  Identities=15%  Similarity=0.133  Sum_probs=160.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      |+||||||+|+||++++++|+++|++|++++|+.+......        ..++.++.+|++|.+ +.++++       . 
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~Dl~d~~-~~~~~~-------~-   63 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV--------NPSAELHVRDLKDYS-WGAGIK-------G-   63 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS--------CTTSEEECCCTTSTT-TTTTCC-------C-
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc--------CCCceEEECccccHH-HHhhcC-------C-
Confidence            57999999999999999999999999999999765433211        346889999999987 544432       3 


Q ss_pred             eEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCC
Q 021391          110 NILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDE  189 (313)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~  189 (313)
                      |+|||+||...  ...+.++++..+++|+.++.++++++...         ..++||++||.+.+...+    ...+++.
T Consensus        64 d~vih~A~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---------~~~~iv~~SS~~vyg~~~----~~~~~e~  128 (312)
T 3ko8_A           64 DVVFHFAANPE--VRLSTTEPIVHFNENVVATFNVLEWARQT---------GVRTVVFASSSTVYGDAD----VIPTPEE  128 (312)
T ss_dssp             SEEEECCSSCS--SSGGGSCHHHHHHHHHHHHHHHHHHHHHH---------TCCEEEEEEEGGGGCSCS----SSSBCTT
T ss_pred             CEEEECCCCCC--chhhhhCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEeCcHHHhCCCC----CCCCCCC
Confidence            99999999542  24566788899999999999999988432         145999999977654322    1224445


Q ss_pred             CCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHH--------------hh
Q 021391          190 SAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGK--------------LV  255 (313)
Q Consensus       190 ~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~--------------~~  255 (313)
                      .+..+...|+.+|.+.+.+++.++.++   |  ++++.++||.+.++..... +...+......              ..
T Consensus       129 ~~~~p~~~Y~~sK~~~e~~~~~~~~~~---g--~~~~~lrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~  202 (312)
T 3ko8_A          129 EPYKPISVYGAAKAAGEVMCATYARLF---G--VRCLAVRYANVVGPRLRHG-VIYDFIMKLRRNPNVLEVLGDGTQRKS  202 (312)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEECTTCCSS-HHHHHHHHHHHCTTEEEEC----CEEC
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHh---C--CCEEEEeeccccCcCCCCC-hHHHHHHHHHhCCCCeEEcCCCCeEEe
Confidence            566677899999999999999999887   5  9999999999998875432 12222221111              11


Q ss_pred             cCChHHHHHHHHHHHccCCccCCCceeecCCc
Q 021391          256 LKNIPQGAATTCYVALHPQVQGVSGEYFSDSN  287 (313)
Q Consensus       256 ~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~  287 (313)
                      ...++|+|+++++++.++......|..++..+
T Consensus       203 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~  234 (312)
T 3ko8_A          203 YLYVRDAVEATLAAWKKFEEMDAPFLALNVGN  234 (312)
T ss_dssp             EEEHHHHHHHHHHHHHHHHHSCCSEEEEEESC
T ss_pred             eEEHHHHHHHHHHHHHhccccCCCCcEEEEcC
Confidence            34489999999999985233345566665443

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.88  E-value=8.8e-22  Score=180.03  Aligned_cols=226  Identities=18%  Similarity=0.132  Sum_probs=161.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc--CCEEEEEecCchh-HHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           30 LTAIVTGASSGIGTETARVLALR--GVHVIMAVRNMAA-GKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~--G~~V~l~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      |++|||||+|+||++++++|+++  |++|++++|+... ..+..++    ....++.++.+|++|.+++.++++      
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~~------   74 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEA----ILGDRVELVVGDIADAELVDKLAA------   74 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGG----GCSSSEEEEECCTTCHHHHHHHHT------
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhh----hccCCeEEEECCCCCHHHHHHHhh------
Confidence            78999999999999999999999  8999999996521 1111111    113478899999999998888776      


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC------
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG------  180 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~------  180 (313)
                       .+|+||||||....  ..+.++++..+++|+.++.++++++.+.          +++||++||.+.....+..      
T Consensus        75 -~~d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----------~~~~v~~SS~~vyg~~~~~~~~~~~  141 (348)
T 1oc2_A           75 -KADAIVHYAAESHN--DNSLNDPSPFIHTNFIGTYTLLEAARKY----------DIRFHHVSTDEVYGDLPLREDLPGH  141 (348)
T ss_dssp             -TCSEEEECCSCCCH--HHHHHCCHHHHHHHTHHHHHHHHHHHHH----------TCEEEEEEEGGGGCCBCCGGGSTTT
T ss_pred             -cCCEEEECCcccCc--cchhhCHHHHHHHHHHHHHHHHHHHHHh----------CCeEEEecccceeCCCccccccccc
Confidence             46999999996532  2344677889999999999999999764          2499999997654322100      


Q ss_pred             --CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHH-----
Q 021391          181 --IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGK-----  253 (313)
Q Consensus       181 --~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~-----  253 (313)
                        .+...+++..+..+...|+.+|++.+.+++.++.++   |  ++++.++||.+.++......+...+......     
T Consensus       142 ~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g--i~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  216 (348)
T 1oc2_A          142 GEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---G--VKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPK  216 (348)
T ss_dssp             TCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCE
T ss_pred             ccccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---C--CCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCce
Confidence              001223444455667789999999999999998876   5  9999999999998876433222222222111     


Q ss_pred             --------hhcCChHHHHHHHHHHHccCCccCCCceeecCCc
Q 021391          254 --------LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSN  287 (313)
Q Consensus       254 --------~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~  287 (313)
                              .....++|+|+++++++..+    .+|+.+..++
T Consensus       217 ~~~~~~~~~~~i~v~Dva~~~~~~~~~~----~~g~~~~i~~  254 (348)
T 1oc2_A          217 LYGEGKNVRDWIHTNDHSTGVWAILTKG----RMGETYLIGA  254 (348)
T ss_dssp             EETTSCCEEECEEHHHHHHHHHHHHHHC----CTTCEEEECC
T ss_pred             EecCCCceEeeEEHHHHHHHHHHHhhCC----CCCCeEEeCC
Confidence                    12346899999999999732    3566555443

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.88  E-value=2.4e-22  Score=183.82  Aligned_cols=174  Identities=13%  Similarity=0.062  Sum_probs=131.7

Q ss_pred             hhccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHH
Q 021391           20 EVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFA   99 (313)
Q Consensus        20 ~~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~   99 (313)
                      ......+.++|+||||||+|+||++++++|+++|++|++++|+.+.              .++.++.+|++|.+++.+++
T Consensus        10 ~~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~--------------~~~~~~~~Dl~d~~~~~~~~   75 (347)
T 4id9_A           10 HSSGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG--------------TGGEEVVGSLEDGQALSDAI   75 (347)
T ss_dssp             -----------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS--------------SCCSEEESCTTCHHHHHHHH
T ss_pred             CCCcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC--------------CCccEEecCcCCHHHHHHHH
Confidence            3345566889999999999999999999999999999999998654              35788999999999988877


Q ss_pred             HHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccC
Q 021391          100 SEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSE  179 (313)
Q Consensus       100 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~  179 (313)
                      +       ++|+|||+|+....    +...++..+++|+.++.++++++...         ..++||++||...+.... 
T Consensus        76 ~-------~~d~vih~A~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~~~---------~~~~~V~~SS~~vyg~~~-  134 (347)
T 4id9_A           76 M-------GVSAVLHLGAFMSW----APADRDRMFAVNVEGTRRLLDAASAA---------GVRRFVFASSGEVYPENR-  134 (347)
T ss_dssp             T-------TCSEEEECCCCCCS----SGGGHHHHHHHHTHHHHHHHHHHHHT---------TCSEEEEEEEGGGTTTTS-
T ss_pred             h-------CCCEEEECCcccCc----chhhHHHHHHHHHHHHHHHHHHHHHc---------CCCeEEEECCHHHhCCCC-
Confidence            6       79999999986533    34456899999999999999988542         246999999976553311 


Q ss_pred             CCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccc
Q 021391          180 GIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIV  234 (313)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~  234 (313)
                       .....+++..+..+...|+.+|.+.+.+++.++.+.   |  ++++.+.|+.+-
T Consensus       135 -~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~ilRp~~v~  183 (347)
T 4id9_A          135 -PEFLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRSG---A--METVILRFSHTQ  183 (347)
T ss_dssp             -CSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS---S--SEEEEEEECEEE
T ss_pred             -CCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHhc---C--CceEEEccceEe
Confidence             112234445556677889999999999999988774   5  899999999887

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.88  E-value=1.2e-22  Score=176.54  Aligned_cols=201  Identities=14%  Similarity=0.074  Sum_probs=131.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcC-CEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRG-VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      +..|++|||||+|+||++++++|+++| ++|++++|+.++.+..        ...++.++.+|++|+++++++++     
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~--------~~~~~~~~~~Dl~d~~~~~~~~~-----   87 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP--------YPTNSQIIMGDVLNHAALKQAMQ-----   87 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS--------CCTTEEEEECCTTCHHHHHHHHT-----
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc--------ccCCcEEEEecCCCHHHHHHHhc-----
Confidence            445899999999999999999999999 8999999998764431        13478999999999999988876     


Q ss_pred             CCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCC
Q 021391          106 GRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDK  185 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  185 (313)
                        ++|+||||+|..         .           ....++.+++.+.+     ...++||++||..+..+.+...  ..
T Consensus        88 --~~D~vv~~a~~~---------~-----------~~~~~~~~~~~~~~-----~~~~~iV~iSS~~~~~~~~~~~--~~  138 (236)
T 3qvo_A           88 --GQDIVYANLTGE---------D-----------LDIQANSVIAAMKA-----CDVKRLIFVLSLGIYDEVPGKF--VE  138 (236)
T ss_dssp             --TCSEEEEECCST---------T-----------HHHHHHHHHHHHHH-----TTCCEEEEECCCCC------------
T ss_pred             --CCCEEEEcCCCC---------c-----------hhHHHHHHHHHHHH-----cCCCEEEEEecceecCCCCccc--cc
Confidence              689999999841         1           11345678888877     3367999999988765433110  01


Q ss_pred             CCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHHHHH
Q 021391          186 INDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGAAT  265 (313)
Q Consensus       186 ~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~eva~~  265 (313)
                      .++.........|..+|.           .+.+.|  |++++|+||++.++..........  ......+..+++|+|++
T Consensus       139 ~~~~~~~~~~~~~~~~~~-----------~l~~~g--i~~~~vrPg~i~~~~~~~~~~~~~--~~~~~~~~i~~~DvA~~  203 (236)
T 3qvo_A          139 WNNAVIGEPLKPFRRAAD-----------AIEASG--LEYTILRPAWLTDEDIIDYELTSR--NEPFKGTIVSRKSVAAL  203 (236)
T ss_dssp             ------CGGGHHHHHHHH-----------HHHTSC--SEEEEEEECEEECCSCCCCEEECT--TSCCSCSEEEHHHHHHH
T ss_pred             chhhcccchHHHHHHHHH-----------HHHHCC--CCEEEEeCCcccCCCCcceEEecc--CCCCCCcEECHHHHHHH
Confidence            111111112233444332           234667  999999999998875443211100  00012345789999999


Q ss_pred             HHHHHccCCccCCCceeecCC
Q 021391          266 TCYVALHPQVQGVSGEYFSDS  286 (313)
Q Consensus       266 ~~~l~~~~~~~~~tG~~~~~~  286 (313)
                      ++++++ +...++ |+.+...
T Consensus       204 i~~ll~-~~~~~~-g~~~~i~  222 (236)
T 3qvo_A          204 ITDIID-KPEKHI-GENIGIN  222 (236)
T ss_dssp             HHHHHH-STTTTT-TEEEEEE
T ss_pred             HHHHHc-Cccccc-CeeEEec
Confidence            999998 555566 5555543

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.88  E-value=1.1e-22  Score=174.50  Aligned_cols=197  Identities=15%  Similarity=0.133  Sum_probs=147.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCC-HHHHHHHHHHHhhcCCC
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSS-LASVRKFASEYNSQGRP  108 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~-~~~v~~~~~~~~~~~g~  108 (313)
                      +++|||||+|+||++++++|+++|++|++++|+.++.+..          .++.++.+|++| .+++.++++       +
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~----------~~~~~~~~D~~d~~~~~~~~~~-------~   63 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY----------NNVKAVHFDVDWTPEEMAKQLH-------G   63 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC----------TTEEEEECCTTSCHHHHHTTTT-------T
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc----------CCceEEEecccCCHHHHHHHHc-------C
Confidence            3799999999999999999999999999999997654321          468999999999 888776654       6


Q ss_pred             eeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCC
Q 021391          109 LNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIND  188 (313)
Q Consensus       109 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~  188 (313)
                      +|+||||+|...          ...+++|+.++.++++++.    +     ...++||++||..+..+.+.       .+
T Consensus        64 ~d~vi~~ag~~~----------~~~~~~n~~~~~~l~~a~~----~-----~~~~~iv~~SS~~~~~~~~~-------~e  117 (219)
T 3dqp_A           64 MDAIINVSGSGG----------KSLLKVDLYGAVKLMQAAE----K-----AEVKRFILLSTIFSLQPEKW-------IG  117 (219)
T ss_dssp             CSEEEECCCCTT----------SSCCCCCCHHHHHHHHHHH----H-----TTCCEEEEECCTTTTCGGGC-------CS
T ss_pred             CCEEEECCcCCC----------CCcEeEeHHHHHHHHHHHH----H-----hCCCEEEEECcccccCCCcc-------cc
Confidence            999999999754          2378899999999988873    2     22469999999877654331       01


Q ss_pred             CCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHHHHHHHH
Q 021391          189 ESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGAATTCY  268 (313)
Q Consensus       189 ~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~eva~~~~~  268 (313)
                       ....+...|+.+|++++.+++      ...|  ++++.++||.+.++.....-...     ........++|+|+.+++
T Consensus       118 -~~~~~~~~Y~~sK~~~e~~~~------~~~~--i~~~ilrp~~v~g~~~~~~~~~~-----~~~~~~i~~~Dva~~i~~  183 (219)
T 3dqp_A          118 -AGFDALKDYYIAKHFADLYLT------KETN--LDYTIIQPGALTEEEATGLIDIN-----DEVSASNTIGDVADTIKE  183 (219)
T ss_dssp             -HHHHHTHHHHHHHHHHHHHHH------HSCC--CEEEEEEECSEECSCCCSEEEES-----SSCCCCEEHHHHHHHHHH
T ss_pred             -cccccccHHHHHHHHHHHHHH------hccC--CcEEEEeCceEecCCCCCccccC-----CCcCCcccHHHHHHHHHH
Confidence             112236789999999998876      4566  99999999999887543321110     122335689999999999


Q ss_pred             HHccCCccCCCceeecCC
Q 021391          269 VALHPQVQGVSGEYFSDS  286 (313)
Q Consensus       269 l~~~~~~~~~tG~~~~~~  286 (313)
                      ++.++.   ..|+.+..+
T Consensus       184 ~l~~~~---~~g~~~~i~  198 (219)
T 3dqp_A          184 LVMTDH---SIGKVISMH  198 (219)
T ss_dssp             HHTCGG---GTTEEEEEE
T ss_pred             HHhCcc---ccCcEEEeC
Confidence            998442   346766653

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.88  E-value=5.8e-21  Score=178.08  Aligned_cols=225  Identities=14%  Similarity=0.115  Sum_probs=155.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHH----------------HHHHHHHHhCCCCceEEEEcc
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGK----------------DVREAIVKEIPSAKVDAMELD   88 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~----------------~~~~~l~~~~~~~~~~~~~~D   88 (313)
                      ...++++||||||+|.||++++++|+++|++|++++|+.....                +....+.... +.++.++.+|
T Consensus         7 ~~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~v~~~~~D   85 (404)
T 1i24_A            7 HHHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT-GKSIELYVGD   85 (404)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH-CCCCEEEESC
T ss_pred             cccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhcc-CCceEEEECC
Confidence            3457899999999999999999999999999999998754321                1111111111 3468899999


Q ss_pred             CCCHHHHHHHHHHHhhcCCCeeEEEEcccCCCCCC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEE
Q 021391           89 VSSLASVRKFASEYNSQGRPLNILINNAGIMASPF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVN  167 (313)
Q Consensus        89 ~s~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~  167 (313)
                      ++|.+++.++++.+     ++|+||||||...... ..+.+.+...+++|+.++.++++++.+.        ..+.+||+
T Consensus        86 l~d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~--------~~~~~~V~  152 (404)
T 1i24_A           86 ICDFEFLAESFKSF-----EPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF--------GEECHLVK  152 (404)
T ss_dssp             TTSHHHHHHHHHHH-----CCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH--------CTTCEEEE
T ss_pred             CCCHHHHHHHHhcc-----CCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHh--------CCCcEEEE
Confidence            99999999998875     6999999999754322 2234456678999999999999998653        11249999


Q ss_pred             ECCccccccccCCCCCCCCCCC--------------CCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCccc
Q 021391          168 VSSEAHRFAYSEGIRFDKINDE--------------SAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSI  233 (313)
Q Consensus       168 isS~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v  233 (313)
                      +||.+.+.... .    .+++.              .+..+...|+.||++.+.+++.++.++   |  |++++|+||.+
T Consensus       153 ~SS~~vyg~~~-~----~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g--i~~~ivrp~~v  222 (404)
T 1i24_A          153 LGTMGEYGTPN-I----DIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---G--IRATDLNQGVV  222 (404)
T ss_dssp             ECCGGGGCCCS-S----CBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEE
T ss_pred             eCcHHHhCCCC-C----CCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---C--CeEEEEeccee
Confidence            99976543221 1    11111              234456789999999999999998876   5  99999999999


Q ss_pred             ccCCccc-----------------cchhHhHHHHHHHh-------------hcCChHHHHHHHHHHHccC
Q 021391          234 VTNLFRY-----------------NGILRGFCNTVGKL-------------VLKNIPQGAATTCYVALHP  273 (313)
Q Consensus       234 ~t~~~~~-----------------~~~~~~~~~~~~~~-------------~~~~~~eva~~~~~l~~~~  273 (313)
                      .++....                 ......+.......             .+..++|+|++++.++.++
T Consensus       223 ~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~  292 (404)
T 1i24_A          223 YGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANP  292 (404)
T ss_dssp             ECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSC
T ss_pred             eCCCCCccccccccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCc
Confidence            8875421                 11122222221111             1245889999999998744

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.88  E-value=8.3e-22  Score=179.66  Aligned_cols=215  Identities=16%  Similarity=0.132  Sum_probs=151.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      +++|||||+|+||++++++|+++|++|++++|+....+...        ..++.++.+|++|.+++.++++       ++
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~--------~~~~~~~~~Dl~d~~~~~~~~~-------~~   78 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLA--------YLEPECRVAEMLDHAGLERALR-------GL   78 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGG--------GGCCEEEECCTTCHHHHHHHTT-------TC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhc--------cCCeEEEEecCCCHHHHHHHHc-------CC
Confidence            48999999999999999999999999999999876543211        2267899999999998877765       69


Q ss_pred             eEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCC
Q 021391          110 NILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDE  189 (313)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~  189 (313)
                      |+|||+||...    ...++++..+++|+.++.++++++.+.  .       .+++|++||.+.....+....   .++.
T Consensus        79 d~vih~a~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~--~-------~~~~v~~SS~~~~~~~~~~~~---~~E~  142 (342)
T 2x4g_A           79 DGVIFSAGYYP----SRPRRWQEEVASALGQTNPFYAACLQA--R-------VPRILYVGSAYAMPRHPQGLP---GHEG  142 (342)
T ss_dssp             SEEEEC----------------CHHHHHHHHHHHHHHHHHHH--T-------CSCEEEECCGGGSCCCTTSSC---BCTT
T ss_pred             CEEEECCccCc----CCCCCHHHHHHHHHHHHHHHHHHHHHc--C-------CCeEEEECCHHhhCcCCCCCC---CCCC
Confidence            99999999653    234677889999999999999999764  1       369999999877654332111   1333


Q ss_pred             CCCCc----cccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCc-cccchhHhHHHHHHHh----------
Q 021391          190 SAYNS----FGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLF-RYNGILRGFCNTVGKL----------  254 (313)
Q Consensus       190 ~~~~~----~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~-~~~~~~~~~~~~~~~~----------  254 (313)
                      .+..+    ...|+.+|++.+.+++.++.   . |  ++++.+.||.+.++.. +..  ...+.......          
T Consensus       143 ~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~---~-g--~~~~ilrp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  214 (342)
T 2x4g_A          143 LFYDSLPSGKSSYVLCKWALDEQAREQAR---N-G--LPVVIGIPGMVLGELDIGPT--TGRVITAIGNGEMTHYVAGQR  214 (342)
T ss_dssp             CCCSSCCTTSCHHHHHHHHHHHHHHHHHH---T-T--CCEEEEEECEEECSCCSSCS--TTHHHHHHHTTCCCEEECCEE
T ss_pred             CCCCccccccChHHHHHHHHHHHHHHHhh---c-C--CcEEEEeCCceECCCCcccc--HHHHHHHHHcCCCccccCCCc
Confidence            34444    67899999999999999886   2 6  9999999999988765 211  11122211111          


Q ss_pred             hcCChHHHHHHHHHHHccCCccCCCceeecCCc
Q 021391          255 VLKNIPQGAATTCYVALHPQVQGVSGEYFSDSN  287 (313)
Q Consensus       255 ~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~  287 (313)
                      ....++|+|+++++++.++.    .|+.+...+
T Consensus       215 ~~i~v~Dva~~~~~~~~~~~----~g~~~~v~~  243 (342)
T 2x4g_A          215 NVIDAAEAGRGLLMALERGR----IGERYLLTG  243 (342)
T ss_dssp             EEEEHHHHHHHHHHHHHHSC----TTCEEEECC
T ss_pred             ceeeHHHHHHHHHHHHhCCC----CCceEEEcC
Confidence            14579999999999997443    155555443

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.88  E-value=5.7e-22  Score=178.73  Aligned_cols=211  Identities=18%  Similarity=0.188  Sum_probs=151.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      +++|||||+|+||++++++|+++|++|++++|..+....   .    . ..++.++.+|++|++++.+++++.     ++
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---~----~-~~~~~~~~~Dl~~~~~~~~~~~~~-----~~   67 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE---N----V-PKGVPFFRVDLRDKEGVERAFREF-----RP   67 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG---G----S-CTTCCEECCCTTCHHHHHHHHHHH-----CC
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh---h----c-ccCeEEEECCCCCHHHHHHHHHhc-----CC
Confidence            379999999999999999999999999999985432111   0    1 135778899999999999888753     78


Q ss_pred             eEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccc-cCCCCCCCCCC
Q 021391          110 NILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAY-SEGIRFDKIND  188 (313)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~-~~~~~~~~~~~  188 (313)
                      |++||+|+....  ..+.++++..+++|+.+++++++++...         ..++||++||.++.++. +..   ...++
T Consensus        68 d~vi~~a~~~~~--~~~~~~~~~~~~~N~~g~~~l~~a~~~~---------~~~~iv~~SS~~~~~g~~~~~---~~~~E  133 (311)
T 2p5y_A           68 THVSHQAAQASV--KVSVEDPVLDFEVNLLGGLNLLEACRQY---------GVEKLVFASTGGAIYGEVPEG---ERAEE  133 (311)
T ss_dssp             SEEEECCSCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHT---------TCSEEEEEEEHHHHHCCCCTT---CCBCT
T ss_pred             CEEEECccccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHHh---------CCCEEEEeCCChhhcCCCCCC---CCcCC
Confidence            999999986432  2345677889999999999999988531         24699999998443332 111   11223


Q ss_pred             CCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc---chhHhHHHHHHHh-----------
Q 021391          189 ESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN---GILRGFCNTVGKL-----------  254 (313)
Q Consensus       189 ~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~---~~~~~~~~~~~~~-----------  254 (313)
                      ..+..+...|+.+|++++.+++.++.++   |  ++++.+.||.+.++.....   .+...+.......           
T Consensus       134 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (311)
T 2p5y_A          134 TWPPRPKSPYAASKAAFEHYLSVYGQSY---G--LKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTP  208 (311)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSST
T ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHc---C--CCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccC
Confidence            3344456789999999999999998775   5  8999999999988865432   1122222211110           


Q ss_pred             -------hcCChHHHHHHHHHHHcc
Q 021391          255 -------VLKNIPQGAATTCYVALH  272 (313)
Q Consensus       255 -------~~~~~~eva~~~~~l~~~  272 (313)
                             .+..++|+|+++++++.+
T Consensus       209 ~~g~~~~~~i~v~Dva~a~~~~~~~  233 (311)
T 2p5y_A          209 GDEGCVRDYVYVGDVAEAHALALFS  233 (311)
T ss_dssp             TSCCCEECEEEHHHHHHHHHHHHHH
T ss_pred             CCCCeEEeeEEHHHHHHHHHHHHhC
Confidence                   123579999999999873

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.87  E-value=3.7e-22  Score=176.30  Aligned_cols=192  Identities=17%  Similarity=0.104  Sum_probs=149.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      |++|||||+|+||++++++|+++|++|++++|+.....           ..++.++.+|++|++++.++++       ++
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~-------~~   64 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA-----------EAHEEIVACDLADAQAVHDLVK-------DC   64 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC-----------CTTEEECCCCTTCHHHHHHHHT-------TC
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc-----------CCCccEEEccCCCHHHHHHHHc-------CC
Confidence            68999999999999999999999999999999865311           1357889999999999888776       58


Q ss_pred             eEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCC
Q 021391          110 NILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDE  189 (313)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~  189 (313)
                      |+||||||..      ..+.++..+++|+.++.++++++.+.         ..++||++||.......+..   ..+++.
T Consensus        65 d~vi~~a~~~------~~~~~~~~~~~n~~~~~~l~~a~~~~---------~~~~iv~~SS~~~~~~~~~~---~~~~E~  126 (267)
T 3ay3_A           65 DGIIHLGGVS------VERPWNDILQANIIGAYNLYEAARNL---------GKPRIVFASSNHTIGYYPRT---TRIDTE  126 (267)
T ss_dssp             SEEEECCSCC------SCCCHHHHHHHTHHHHHHHHHHHHHT---------TCCEEEEEEEGGGSTTSBTT---SCBCTT
T ss_pred             CEEEECCcCC------CCCCHHHHHHHHHHHHHHHHHHHHHh---------CCCEEEEeCCHHHhCCCCCC---CCCCCC
Confidence            9999999975      34567889999999999999988642         24699999998776443311   123444


Q ss_pred             CCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCccc-ccCCccccchhHhHHHHHHHhhcCChHHHHHHHHH
Q 021391          190 SAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSI-VTNLFRYNGILRGFCNTVGKLVLKNIPQGAATTCY  268 (313)
Q Consensus       190 ~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~eva~~~~~  268 (313)
                      .+..+...|+.+|++++.+++.++.   +.|  |+++.++||.+ .++...           .......+++|+|+.++.
T Consensus       127 ~~~~~~~~Y~~sK~~~e~~~~~~~~---~~g--i~~~~lrp~~v~~~~~~~-----------~~~~~~~~~~dva~~~~~  190 (267)
T 3ay3_A          127 VPRRPDSLYGLSKCFGEDLASLYYH---KFD--IETLNIRIGSCFPKPKDA-----------RMMATWLSVDDFMRLMKR  190 (267)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHH---TTC--CCEEEEEECBCSSSCCSH-----------HHHHHBCCHHHHHHHHHH
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHH---HcC--CCEEEEeceeecCCCCCC-----------CeeeccccHHHHHHHHHH
Confidence            4555677899999999999998864   346  99999999997 444211           012335789999999999


Q ss_pred             HHccC
Q 021391          269 VALHP  273 (313)
Q Consensus       269 l~~~~  273 (313)
                      ++.++
T Consensus       191 ~~~~~  195 (267)
T 3ay3_A          191 AFVAP  195 (267)
T ss_dssp             HHHSS
T ss_pred             HHhCC
Confidence            99754

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.87  E-value=2.3e-21  Score=182.62  Aligned_cols=227  Identities=12%  Similarity=0.064  Sum_probs=154.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCch---hHHHHHHHHHHhC-------CCCceEEEEccCCCHHHH
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMA---AGKDVREAIVKEI-------PSAKVDAMELDVSSLASV   95 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~---~~~~~~~~l~~~~-------~~~~~~~~~~D~s~~~~v   95 (313)
                      ...+|+||||||+|+||++++++|+++|++|++++|+.+   ..+.+.+.+...+       ...++.++.+|+++++++
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l  145 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV  145 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence            356789999999999999999999999999999999887   3334433332221       135799999999998877


Q ss_pred             HHHHHHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccc
Q 021391           96 RKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRF  175 (313)
Q Consensus        96 ~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~  175 (313)
                      .        ..+++|+||||||...     ..+.++..+++|+.++.++++++.+   .       ..++|++||...  
T Consensus       146 ~--------~~~~~d~Vih~A~~~~-----~~~~~~~~~~~Nv~g~~~l~~aa~~---~-------~~~~v~~SS~~~--  200 (427)
T 4f6c_A          146 V--------LPENMDTIIHAGARTD-----HFGDDDEFEKVNVQGTVDVIRLAQQ---H-------HARLIYVSTISV--  200 (427)
T ss_dssp             C--------CSSCCSEEEECCCCC------------CHHHHHHHHHHHHHHHHHH---T-------TCEEEEEEEGGG--
T ss_pred             C--------CcCCCCEEEECCcccC-----CCCCHHHHHHHHHHHHHHHHHHHHh---c-------CCcEEEECchHh--
Confidence            6        4568999999999763     2356788999999999999999976   2       469999999887  


Q ss_pred             cccCCC--CCCCCCCCCC---CCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-------ch
Q 021391          176 AYSEGI--RFDKINDESA---YNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-------GI  243 (313)
Q Consensus       176 ~~~~~~--~~~~~~~~~~---~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-------~~  243 (313)
                      +.....  ....+.+...   .++...|+.+|++.+.+++.++.    .|  ++++++.||.+-++.....       .+
T Consensus       201 G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g--~~~~ivRpg~v~G~~~~~~~~~~~~~~~  274 (427)
T 4f6c_A          201 GTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NG--LDGRIVRVGNLTSPYNGRWHMRNIKTNR  274 (427)
T ss_dssp             GSEECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TT--CCEEEEEECCEESCSSSCCCCTTGGGCH
T ss_pred             CCCccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cC--CCEEEEeCCeeecCCCCCccccCcchHH
Confidence            221000  0111112221   33567899999999999988653    57  9999999999987764432       11


Q ss_pred             hHhHHHHHHHh------------hcCChHHHHHHHHHHHccCCccCCCceeecCCc
Q 021391          244 LRGFCNTVGKL------------VLKNIPQGAATTCYVALHPQVQGVSGEYFSDSN  287 (313)
Q Consensus       244 ~~~~~~~~~~~------------~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~  287 (313)
                      ...+.......            .+..++|+|+++++++..+.    .|..+...+
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~----~g~~~~l~~  326 (427)
T 4f6c_A          275 FSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT----PQIIYHVLS  326 (427)
T ss_dssp             HHHHHHHHHHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSCC----CCSEEEESC
T ss_pred             HHHHHHHHHhcCCCCCccccceEEEeeHHHHHHHHHHHHcCCC----CCCEEEecC
Confidence            22222221111            14567999999999997433    556555443

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.87  E-value=1.9e-21  Score=177.13  Aligned_cols=223  Identities=16%  Similarity=0.116  Sum_probs=158.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc---C---CEEEEEecCchh--HHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHH
Q 021391           30 LTAIVTGASSGIGTETARVLALR---G---VHVIMAVRNMAA--GKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~---G---~~V~l~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      +++|||||+|+||++++++|+++   |   ++|++++|+...  .+. .+.+.   ...++.++.+|++|.+++.+++  
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~-~~~~~---~~~~~~~~~~Dl~d~~~~~~~~--   74 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRAN-LAPVD---ADPRLRFVHGDIRDAGLLAREL--   74 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGG-GGGGT---TCTTEEEEECCTTCHHHHHHHT--
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhh-hhhcc---cCCCeEEEEcCCCCHHHHHHHh--
Confidence            36999999999999999999997   8   999999986421  111 11111   1347889999999998887776  


Q ss_pred             HhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          102 YNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                           .++|+||||||....  ..+.++++..+++|+.++.++++++.+..         .++||++||.+.+.... . 
T Consensus        75 -----~~~d~Vih~A~~~~~--~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~---------~~~~v~~SS~~vyg~~~-~-  136 (337)
T 1r6d_A           75 -----RGVDAIVHFAAESHV--DRSIAGASVFTETNVQGTQTLLQCAVDAG---------VGRVVHVSTNQVYGSID-S-  136 (337)
T ss_dssp             -----TTCCEEEECCSCCCH--HHHHHCCHHHHHHHTHHHHHHHHHHHHTT---------CCEEEEEEEGGGGCCCS-S-
T ss_pred             -----cCCCEEEECCCccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHHcC---------CCEEEEecchHHhCCCC-C-
Confidence                 379999999996432  22345678899999999999999987642         35999999976543221 1 


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHH--------
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGK--------  253 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~--------  253 (313)
                        ..+++..+..+...|+.+|++.+.+++.++.++   |  ++++.++||.+.++......+...+......        
T Consensus       137 --~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g--~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (337)
T 1r6d_A          137 --GSWTESSPLEPNSPYAASKAGSDLVARAYHRTY---G--LDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYG  209 (337)
T ss_dssp             --SCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEET
T ss_pred             --CCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHH---C--CCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeC
Confidence              123344455567789999999999999998875   5  8899999999988875432222222222111        


Q ss_pred             -----hhcCChHHHHHHHHHHHccCCccCCCceeecCCc
Q 021391          254 -----LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSN  287 (313)
Q Consensus       254 -----~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~  287 (313)
                           ..+..++|+|+++++++.++    .+|+.+...+
T Consensus       210 ~~~~~~~~i~v~Dva~a~~~~~~~~----~~g~~~~v~~  244 (337)
T 1r6d_A          210 DGANVREWVHTDDHCRGIALVLAGG----RAGEIYHIGG  244 (337)
T ss_dssp             TSCCEEEEEEHHHHHHHHHHHHHHC----CTTCEEEECC
T ss_pred             CCCeeEeeEeHHHHHHHHHHHHhCC----CCCCEEEeCC
Confidence                 12346799999999998732    3566555443

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.87  E-value=6.2e-21  Score=177.56  Aligned_cols=188  Identities=16%  Similarity=0.135  Sum_probs=139.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHH-HcCCEEEEEecCchh---------HHHHHHHHHHhCC---CCc---eEEEEccCCCH
Q 021391           29 GLTAIVTGASSGIGTETARVLA-LRGVHVIMAVRNMAA---------GKDVREAIVKEIP---SAK---VDAMELDVSSL   92 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La-~~G~~V~l~~r~~~~---------~~~~~~~l~~~~~---~~~---~~~~~~D~s~~   92 (313)
                      +++||||||+|+||++++++|+ ++|++|++++|+...         .+.+.+.+.....   ..+   +.++.+|++|+
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            4689999999999999999999 999999999997654         3333222222211   124   88999999999


Q ss_pred             HHHHHHHHHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391           93 ASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus        93 ~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                      +++.+++++    ++++|+||||||....  ..+.++++..+++|+.+++++++++...         ..++||++||.+
T Consensus        82 ~~~~~~~~~----~~~~d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~ll~a~~~~---------~~~~iv~~SS~~  146 (397)
T 1gy8_A           82 DFLNGVFTR----HGPIDAVVHMCAFLAV--GESVRDPLKYYDNNVVGILRLLQAMLLH---------KCDKIIFSSSAA  146 (397)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHHHT---------TCCEEEEEEEGG
T ss_pred             HHHHHHHHh----cCCCCEEEECCCccCc--CcchhhHHHHHHHHhHHHHHHHHHHHHh---------CCCEEEEECCHH
Confidence            998888764    4569999999997532  1234677889999999999999986421         246999999965


Q ss_pred             ccccccCC----CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCC
Q 021391          173 HRFAYSEG----IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNL  237 (313)
Q Consensus       173 ~~~~~~~~----~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~  237 (313)
                      .. +.+..    .....+++..+..+...|+.+|++++.+++.++.++   |  |+++++.||.+-.+.
T Consensus       147 v~-g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---g--i~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          147 IF-GNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---G--IKGICLRYFNACGAH  209 (397)
T ss_dssp             GT-BSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEECCC
T ss_pred             Hh-CCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---C--CcEEEEeccceeCCC
Confidence            54 22210    001223444455567789999999999999999887   5  999999999987664

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.87  E-value=5.1e-22  Score=219.15  Aligned_cols=175  Identities=17%  Similarity=0.159  Sum_probs=138.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCE-EEEEecCchhH---HHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVH-VIMAVRNMAAG---KDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~-V~l~~r~~~~~---~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .+|++|||||++|||+++|+.|+++|++ |++++|+..+.   .+..+++...  +.++.++.||++|.++++++++++.
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~~ 1960 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQ--GVQVLVSTSNASSLDGARSLITEAT 1960 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHT--TCEEEEECCCSSSHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhC--CCEEEEEecCCCCHHHHHHHHHHHH
Confidence            7899999999999999999999999996 88899986543   3444455443  5688999999999999999999987


Q ss_pred             hcCCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          104 SQGRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      + +|+||+||||||+....  .+.+.++|++.+++|+.|++++.+.+.+.|.+       .++||++||.++..+.+   
T Consensus      1961 ~-~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~-------~g~iV~iSS~ag~~g~~--- 2029 (2512)
T 2vz8_A         1961 Q-LGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPE-------LDYFVIFSSVSCGRGNA--- 2029 (2512)
T ss_dssp             H-HSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTT-------CCEEEEECCHHHHTTCT---
T ss_pred             h-cCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhccc-------CCEEEEecchhhcCCCC---
Confidence            4 78999999999986542  27889999999999999999999999998865       47999999999998877   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCccc
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSI  233 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v  233 (313)
                                  ++..|+++|+++++|++.+..+    |  +...++..|.+
T Consensus      2030 ------------g~~~Y~aaKaal~~l~~~rr~~----G--l~~~a~~~g~~ 2063 (2512)
T 2vz8_A         2030 ------------GQANYGFANSAMERICEKRRHD----G--LPGLAVQWGAI 2063 (2512)
T ss_dssp             ------------TCHHHHHHHHHHHHHHHHHHHT----T--SCCCEEEECCB
T ss_pred             ------------CcHHHHHHHHHHHHHHHHHHHC----C--CcEEEEEccCc
Confidence                        7889999999999999976653    5  55566666665

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.87  E-value=1.1e-21  Score=181.79  Aligned_cols=227  Identities=13%  Similarity=0.039  Sum_probs=155.7

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcC-CEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRG-VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      ...+++|++|||||+|+||++++++|+++| ++|++++|+.....+..   .   ...++.++.+|++|++++.++++  
T Consensus        27 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l---~---~~~~v~~~~~Dl~d~~~l~~~~~--   98 (377)
T 2q1s_A           27 ASKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINV---P---DHPAVRFSETSITDDALLASLQD--   98 (377)
T ss_dssp             CGGGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGS---C---CCTTEEEECSCTTCHHHHHHCCS--
T ss_pred             hHHhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhc---c---CCCceEEEECCCCCHHHHHHHhh--
Confidence            345788999999999999999999999999 99999999765422111   0   13468899999999988766554  


Q ss_pred             hhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          103 NSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                           ++|+|||+||....  ..+.++++..+++|+.++.++++++...        ...+++|++||.+.+.... .. 
T Consensus        99 -----~~d~Vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~ll~a~~~~--------~~~~~~V~~SS~~vyg~~~-~~-  161 (377)
T 2q1s_A           99 -----EYDYVFHLATYHGN--QSSIHDPLADHENNTLTTLKLYERLKHF--------KRLKKVVYSAAGCSIAEKT-FD-  161 (377)
T ss_dssp             -----CCSEEEECCCCSCH--HHHHHCHHHHHHHHTHHHHHHHHHHTTC--------SSCCEEEEEEEC-----------
T ss_pred             -----CCCEEEECCCccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHHh--------CCCCeEEEeCCHHHcCCCC-CC-
Confidence                 79999999996432  2234567889999999999999887321        0245999999976543211 10 


Q ss_pred             CCCCC--CCC---CC-CccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCc---------cc----cch
Q 021391          183 FDKIN--DES---AY-NSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLF---------RY----NGI  243 (313)
Q Consensus       183 ~~~~~--~~~---~~-~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~---------~~----~~~  243 (313)
                        .++  +..   +. .+...|+.+|++.+.+++.++.++   |  ++++.+.||.+-++..         ..    ..+
T Consensus       162 --~~~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~  234 (377)
T 2q1s_A          162 --DAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---Q--LPTVRARFQNVYGPGEILGAGRWRGTPATVWRNV  234 (377)
T ss_dssp             -------CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSH
T ss_pred             --CcCcccccccccccCCCCchHHHHHHHHHHHHHHHHHh---C--CCEEEEeeccEECCCCcccccccccCcccccccH
Confidence              111  222   22 456789999999999999998765   5  8999999999988765         21    122


Q ss_pred             hHhHHHHHHHh-------------hcCChHHHHHH-HHHHHccCCccCCCceeecCCc
Q 021391          244 LRGFCNTVGKL-------------VLKNIPQGAAT-TCYVALHPQVQGVSGEYFSDSN  287 (313)
Q Consensus       244 ~~~~~~~~~~~-------------~~~~~~eva~~-~~~l~~~~~~~~~tG~~~~~~~  287 (313)
                      ...+.......             ....++|+|++ +++++..+.    +| .+...+
T Consensus       235 ~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~----~g-~~~i~~  287 (377)
T 2q1s_A          235 TPTFIYKALKGMPLPLENGGVATRDFIFVEDVANGLIACAADGTP----GG-VYNIAS  287 (377)
T ss_dssp             HHHHHHHHHTTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCT----TE-EEECCC
T ss_pred             HHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC----CC-eEEecC
Confidence            22222222111             12347899999 999987432    67 555544

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.86  E-value=2.7e-22  Score=172.70  Aligned_cols=216  Identities=16%  Similarity=0.027  Sum_probs=153.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      |++|||||+|+||++++++|+++|++|++++|+.++....         ..++.++.+|++|.+++.++++       ++
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~-------~~   68 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE---------NEHLKVKKADVSSLDEVCEVCK-------GA   68 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC---------CTTEEEECCCTTCHHHHHHHHT-------TC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc---------cCceEEEEecCCCHHHHHHHhc-------CC
Confidence            7899999999999999999999999999999997654321         2578999999999999888876       68


Q ss_pred             eEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCC
Q 021391          110 NILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDE  189 (313)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~  189 (313)
                      |+||||+|....        ....+++|+.+..++++++...         ...++|++||..+..+.+...     ..+
T Consensus        69 d~vi~~a~~~~~--------~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~Ss~~~~~~~~~~~-----~~~  126 (227)
T 3dhn_A           69 DAVISAFNPGWN--------NPDIYDETIKVYLTIIDGVKKA---------GVNRFLMVGGAGSLFIAPGLR-----LMD  126 (227)
T ss_dssp             SEEEECCCC--------------CCSHHHHHHHHHHHHHHHT---------TCSEEEEECCSTTSEEETTEE-----GGG
T ss_pred             CEEEEeCcCCCC--------ChhHHHHHHHHHHHHHHHHHHh---------CCCEEEEeCChhhccCCCCCc-----ccc
Confidence            999999986421        1126889999999988887542         135999999987765543211     112


Q ss_pred             CCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHh--H-HHHHHHhhcCChHHHHHHH
Q 021391          190 SAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRG--F-CNTVGKLVLKNIPQGAATT  266 (313)
Q Consensus       190 ~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~--~-~~~~~~~~~~~~~eva~~~  266 (313)
                      .+..+...|+.+|.+.+.+++.++.   ..|  ++++.++||.+.++......+...  . ...-.......++|+|+++
T Consensus       127 ~~~~p~~~Y~~sK~~~e~~~~~~~~---~~~--~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ai  201 (227)
T 3dhn_A          127 SGEVPENILPGVKALGEFYLNFLMK---EKE--IDWVFFSPAADMRPGVRTGRYRLGKDDMIVDIVGNSHISVEDYAAAM  201 (227)
T ss_dssp             TTCSCGGGHHHHHHHHHHHHHTGGG---CCS--SEEEEEECCSEEESCCCCCCCEEESSBCCCCTTSCCEEEHHHHHHHH
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhh---ccC--ccEEEEeCCcccCCCccccceeecCCCcccCCCCCcEEeHHHHHHHH
Confidence            2334567899999999988877665   346  999999999987665432211100  0 0000012246799999999


Q ss_pred             HHHHccCCccCCCceeecCCcccCC
Q 021391          267 CYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       267 ~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      +.++.++.   ..|+.+...+..++
T Consensus       202 ~~~l~~~~---~~g~~~~~~~~~~~  223 (227)
T 3dhn_A          202 IDELEHPK---HHQERFTIGYLEHH  223 (227)
T ss_dssp             HHHHHSCC---CCSEEEEEECCSCC
T ss_pred             HHHHhCcc---ccCcEEEEEeehhc
Confidence            99998543   45776665444433

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.86  E-value=9.5e-22  Score=177.81  Aligned_cols=224  Identities=17%  Similarity=0.131  Sum_probs=145.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEec-CchhHHHHHHHHHHhCC--CCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVR-NMAAGKDVREAIVKEIP--SAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r-~~~~~~~~~~~l~~~~~--~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      ||+||||||+|+||++++++|+++|++|+++.| +.+..+.. ..+.. .+  ..++.++.+|++|++++.++++     
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDV-SFLTN-LPGASEKLHFFNADLSNPDSFAAAIE-----   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCC-HHHHT-STTHHHHEEECCCCTTCGGGGHHHHT-----
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHH-HHHHh-hhccCCceEEEecCCCCHHHHHHHHc-----
Confidence            689999999999999999999999999999998 64321110 01111 11  1257889999999999888776     


Q ss_pred             CCCeeEEEEcccCCCCCCccCc-cchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCC
Q 021391          106 GRPLNILINNAGIMASPFMLSK-DNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFD  184 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~~~~~-~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  184 (313)
                        ++|+|||+|+..    .... +.++..+++|+.+++++++++.+..        ..++||++||.++..+.+....  
T Consensus        74 --~~d~vih~A~~~----~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~--------~~~~iV~~SS~~~~~~~~~~~~--  137 (322)
T 2p4h_X           74 --GCVGIFHTASPI----DFAVSEPEEIVTKRTVDGALGILKACVNSK--------TVKRFIYTSSGSAVSFNGKDKD--  137 (322)
T ss_dssp             --TCSEEEECCCCC------------CHHHHHHHHHHHHHHHHHTTCS--------SCCEEEEEEEGGGTSCSSSCCS--
T ss_pred             --CCCEEEEcCCcc----cCCCCChHHHHHHHHHHHHHHHHHHHHhcC--------CccEEEEeccHHHcccCCCCCe--
Confidence              579999999643    1122 2245689999999999999886431        1469999999886654332110  


Q ss_pred             CCCCCCCC--------Ccc-ccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--chhHhHHHHHH-
Q 021391          185 KINDESAY--------NSF-GAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--GILRGFCNTVG-  252 (313)
Q Consensus       185 ~~~~~~~~--------~~~-~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--~~~~~~~~~~~-  252 (313)
                      .+++..+.        .+. ..|+.||++.+.+++.++.+   .|  |++++++||.+.++.....  ........... 
T Consensus       138 ~~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~g--i~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g  212 (322)
T 2p4h_X          138 VLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NG--IDVVTLILPFIVGRFVCPKLPDSIEKALVLVLG  212 (322)
T ss_dssp             EECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TT--CCEEEEEECEEESCCCSSSCCHHHHHHTHHHHS
T ss_pred             ecCCccccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cC--CcEEEEcCCceECCCCCCCCCchHHHHHHHHhC
Confidence            11111110        111 16999999877766555432   46  9999999999999875432  11111100000 


Q ss_pred             ------Hh--hcCChHHHHHHHHHHHccCCccCCCceee
Q 021391          253 ------KL--VLKNIPQGAATTCYVALHPQVQGVSGEYF  283 (313)
Q Consensus       253 ------~~--~~~~~~eva~~~~~l~~~~~~~~~tG~~~  283 (313)
                            ..  .+..++|+|+++++++.++   ..+|+++
T Consensus       213 ~~~~~~~~~~~~i~v~Dva~a~~~~~~~~---~~~g~~~  248 (322)
T 2p4h_X          213 KKEQIGVTRFHMVHVDDVARAHIYLLENS---VPGGRYN  248 (322)
T ss_dssp             CGGGCCEEEEEEEEHHHHHHHHHHHHHSC---CCCEEEE
T ss_pred             CCccCcCCCcCEEEHHHHHHHHHHHhhCc---CCCCCEE
Confidence                  01  2568999999999999732   2567755

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.86  E-value=3.6e-21  Score=178.53  Aligned_cols=220  Identities=16%  Similarity=0.091  Sum_probs=156.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .+..++|++|||||+|+||++++++|+++|++|++++|+.......      .  ..++.++.+|++|.+++.++++   
T Consensus        24 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~--~~~v~~~~~Dl~d~~~~~~~~~---   92 (379)
T 2c5a_A           24 YWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE------D--MFCDEFHLVDLRVMENCLKVTE---   92 (379)
T ss_dssp             SCTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG------G--GTCSEEEECCTTSHHHHHHHHT---
T ss_pred             cccccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh------c--cCCceEEECCCCCHHHHHHHhC---
Confidence            3445678999999999999999999999999999999986543211      0  2367899999999999888775   


Q ss_pred             hcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC-C
Q 021391          104 SQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI-R  182 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~-~  182 (313)
                          ++|+|||+||..... ....++++..+++|+.++.++++++...         ..+++|++||...+....... +
T Consensus        93 ----~~d~Vih~A~~~~~~-~~~~~~~~~~~~~Nv~g~~~ll~a~~~~---------~~~~~V~~SS~~v~~~~~~~~~~  158 (379)
T 2c5a_A           93 ----GVDHVFNLAADMGGM-GFIQSNHSVIMYNNTMISFNMIEAARIN---------GIKRFFYASSACIYPEFKQLETT  158 (379)
T ss_dssp             ----TCSEEEECCCCCCCH-HHHTTCHHHHHHHHHHHHHHHHHHHHHT---------TCSEEEEEEEGGGSCGGGSSSSS
T ss_pred             ----CCCEEEECceecCcc-cccccCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEEeehheeCCCCCCCcc
Confidence                799999999975321 1124678889999999999999988532         145999999976543321100 0


Q ss_pred             CCCCCCCC--CCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----chhHhHHHHHHHh--
Q 021391          183 FDKINDES--AYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----GILRGFCNTVGKL--  254 (313)
Q Consensus       183 ~~~~~~~~--~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~~~--  254 (313)
                      ...+++..  +..+...|+.+|++.+.+++.++.+.   |  ++++.+.||.+.++.....    .+...+.......  
T Consensus       159 ~~~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  233 (379)
T 2c5a_A          159 NVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF---G--IECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTD  233 (379)
T ss_dssp             SCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSS
T ss_pred             CCCcCcccCCCCCCCChhHHHHHHHHHHHHHHHHHH---C--CCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCC
Confidence            00122222  33456789999999999999998765   5  9999999999988764321    1222222222111  


Q ss_pred             ------------hcCChHHHHHHHHHHHccC
Q 021391          255 ------------VLKNIPQGAATTCYVALHP  273 (313)
Q Consensus       255 ------------~~~~~~eva~~~~~l~~~~  273 (313)
                                  .+..++|+|++++.++.++
T Consensus       234 ~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~  264 (379)
T 2c5a_A          234 RFEMWGDGLQTRSFTFIDECVEGVLRLTKSD  264 (379)
T ss_dssp             CEEEESCSCCEECCEEHHHHHHHHHHHHHSS
T ss_pred             ceEEeCCCCeeEEEEEHHHHHHHHHHHhhcc
Confidence                        1234899999999999743

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.86  E-value=6.3e-21  Score=172.05  Aligned_cols=216  Identities=13%  Similarity=0.113  Sum_probs=153.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      |+||||||+|+||++++++|+++|..|++..|+....+..         ...+.++.+|+++ +++.++++       ++
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~---------~~~~~~~~~Dl~~-~~~~~~~~-------~~   64 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFV---------NEAARLVKADLAA-DDIKDYLK-------GA   64 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGS---------CTTEEEECCCTTT-SCCHHHHT-------TC
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhc---------CCCcEEEECcCCh-HHHHHHhc-------CC
Confidence            5899999999999999999999995555555554332211         3468899999999 88777765       79


Q ss_pred             eEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCC
Q 021391          110 NILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDE  189 (313)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~  189 (313)
                      |+|||+|+...  ...+.++++..+++|+.++.++++++...         ..+++|++||...+....    ...+++.
T Consensus        65 d~vih~a~~~~--~~~~~~~~~~~~~~nv~~~~~l~~~~~~~---------~~~~iv~~SS~~vyg~~~----~~~~~E~  129 (313)
T 3ehe_A           65 EEVWHIAANPD--VRIGAENPDEIYRNNVLATYRLLEAMRKA---------GVSRIVFTSTSTVYGEAK----VIPTPED  129 (313)
T ss_dssp             SEEEECCCCCC--CC-CCCCHHHHHHHHHHHHHHHHHHHHHH---------TCCEEEEECCGGGGCSCS----SSSBCTT
T ss_pred             CEEEECCCCCC--hhhhhhCHHHHHHHHHHHHHHHHHHHHHc---------CCCeEEEeCchHHhCcCC----CCCCCCC
Confidence            99999998532  24567788999999999999999986432         146999999977653321    1223344


Q ss_pred             CCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHH--------------hh
Q 021391          190 SAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGK--------------LV  255 (313)
Q Consensus       190 ~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~--------------~~  255 (313)
                      .+..+...|+.+|.+.+.+++.++.++   |  ++++.+.|+.+-++..... +...+......              ..
T Consensus       130 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g--~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~  203 (313)
T 3ehe_A          130 YPTHPISLYGASKLACEALIESYCHTF---D--MQAWIYRFANVIGRRSTHG-VIYDFIMKLKRNPEELEILGNGEQNKS  203 (313)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHT---T--CEEEEEECSCEESTTCCCS-HHHHHHHHHHHCTTEEEESTTSCCEEC
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHhc---C--CCEEEEeeccccCcCCCcC-hHHHHHHHHHcCCCceEEeCCCCeEEe
Confidence            455667889999999999999999876   5  9999999999987754432 22222221111              11


Q ss_pred             cCChHHHHHHHHHHHccCCccCCCceeecCCc
Q 021391          256 LKNIPQGAATTCYVALHPQVQGVSGEYFSDSN  287 (313)
Q Consensus       256 ~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~  287 (313)
                      +..++|+|+++++++. +   ...|..++..+
T Consensus       204 ~i~v~Dva~a~~~~~~-~---~~~~~~~ni~~  231 (313)
T 3ehe_A          204 YIYISDCVDAMLFGLR-G---DERVNIFNIGS  231 (313)
T ss_dssp             CEEHHHHHHHHHHHTT-C---CSSEEEEECCC
T ss_pred             EEEHHHHHHHHHHHhc-c---CCCCceEEECC
Confidence            3457899999999996 2   23455555443

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.86  E-value=1.9e-20  Score=173.52  Aligned_cols=223  Identities=11%  Similarity=0.012  Sum_probs=152.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchh-----HHHHHHHHHHhCCCC-ceEEEEccCCCHHHHHHHHHHHh
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAA-----GKDVREAIVKEIPSA-KVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~-----~~~~~~~l~~~~~~~-~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      |+||||||+|+||++++++|+++|++|++++|+.+.     ++...+.+...  +. ++.++.+|++|.+++.++++.+ 
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~-  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV--NKALMKLHYADLTDASSLRRWIDVI-  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC----------CCEEEEECCTTCHHHHHHHHHHH-
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccc--cccceEEEECCCCCHHHHHHHHHhc-
Confidence            799999999999999999999999999999997653     22221111111  22 6889999999999999998876 


Q ss_pred             hcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          104 SQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                          ++|+||||||....  ..+.++++..+++|+.++.++++++.+...+.    .++++||++||.+.+.....    
T Consensus       106 ----~~d~Vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~----~~~~~~v~~SS~~vyg~~~~----  171 (381)
T 1n7h_A          106 ----KPDEVYNLAAQSHV--AVSFEIPDYTADVVATGALRLLEAVRSHTIDS----GRTVKYYQAGSSEMFGSTPP----  171 (381)
T ss_dssp             ----CCSEEEECCSCCCH--HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHH----CCCCEEEEEEEGGGGTTSCS----
T ss_pred             ----CCCEEEECCcccCc--cccccCHHHHHHHHHHHHHHHHHHHHHhCCcc----CCccEEEEeCcHHHhCCCCC----
Confidence                78999999996532  23356788899999999999999999987653    23579999999876533221    


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCC-CcEEEEEeeCcccccCCccccchhHhHHHHHH----------
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDG-VNITANSLHPGSIVTNLFRYNGILRGFCNTVG----------  252 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g-~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~----------  252 (313)
                       .+++..+..+...|+.+|++.+.+++.++.+++-.- ..+.+|.+.||...+...   .....+.....          
T Consensus       172 -~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~---~~~~~~~~~~~~g~~~~~~~g  247 (381)
T 1n7h_A          172 -PQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVT---RKITRALGRIKVGLQTKLFLG  247 (381)
T ss_dssp             -SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHH---HHHHHHHHHHHHTSCCCEEES
T ss_pred             -CCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchh---HHHHHHHHHHHcCCCCeEEeC
Confidence             234444555677899999999999999988764211 002234444543221110   00111111110          


Q ss_pred             ----HhhcCChHHHHHHHHHHHccC
Q 021391          253 ----KLVLKNIPQGAATTCYVALHP  273 (313)
Q Consensus       253 ----~~~~~~~~eva~~~~~l~~~~  273 (313)
                          ...+..++|+|+++++++.++
T Consensus       248 ~~~~~~~~v~v~Dva~a~~~~~~~~  272 (381)
T 1n7h_A          248 NLQASRDWGFAGDYVEAMWLMLQQE  272 (381)
T ss_dssp             CTTCEEECEEHHHHHHHHHHHHTSS
T ss_pred             CCCceeeeEEHHHHHHHHHHHHhCC
Confidence                012456899999999999743

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.86  E-value=1.5e-21  Score=165.00  Aligned_cols=202  Identities=13%  Similarity=0.022  Sum_probs=144.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      ++|+++||||+|+||++++++|+++|++|++++|+.++.+..        ...++.++.+|++|++++.++++       
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~-------   66 (206)
T 1hdo_A            2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE--------GPRPAHVVVGDVLQAADVDKTVA-------   66 (206)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS--------SCCCSEEEESCTTSHHHHHHHHT-------
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc--------cCCceEEEEecCCCHHHHHHHHc-------
Confidence            458999999999999999999999999999999987654321        03468899999999998887775       


Q ss_pred             CeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCC
Q 021391          108 PLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIN  187 (313)
Q Consensus       108 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  187 (313)
                      .+|++|||+|....      +++   .++|+.+..++++++...         ..+++|++||.......+.        
T Consensus        67 ~~d~vi~~a~~~~~------~~~---~~~n~~~~~~~~~~~~~~---------~~~~~v~~Ss~~~~~~~~~--------  120 (206)
T 1hdo_A           67 GQDAVIVLLGTRND------LSP---TTVMSEGARNIVAAMKAH---------GVDKVVACTSAFLLWDPTK--------  120 (206)
T ss_dssp             TCSEEEECCCCTTC------CSC---CCHHHHHHHHHHHHHHHH---------TCCEEEEECCGGGTSCTTC--------
T ss_pred             CCCEEEECccCCCC------CCc---cchHHHHHHHHHHHHHHh---------CCCeEEEEeeeeeccCccc--------
Confidence            58999999996533      111   247888888888877542         1459999999865432210        


Q ss_pred             CCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCccc-ccCCccccchhHhHHHHHHHhhcCChHHHHHHH
Q 021391          188 DESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSI-VTNLFRYNGILRGFCNTVGKLVLKNIPQGAATT  266 (313)
Q Consensus       188 ~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~eva~~~  266 (313)
                         ...+...|+.+|.+++.+++.       .|  ++++.+.||.+ .++......  ... ...+.....+++|+|+.+
T Consensus       121 ---~~~~~~~y~~~K~~~e~~~~~-------~~--i~~~~lrp~~~~~~~~~~~~~--~~~-~~~~~~~~i~~~Dva~~~  185 (206)
T 1hdo_A          121 ---VPPRLQAVTDDHIRMHKVLRE-------SG--LKYVAVMPPHIGDQPLTGAYT--VTL-DGRGPSRVISKHDLGHFM  185 (206)
T ss_dssp             ---SCGGGHHHHHHHHHHHHHHHH-------TC--SEEEEECCSEEECCCCCSCCE--EES-SSCSSCSEEEHHHHHHHH
T ss_pred             ---ccccchhHHHHHHHHHHHHHh-------CC--CCEEEEeCCcccCCCCCcceE--ecc-cCCCCCCccCHHHHHHHH
Confidence               000456899999999988742       56  99999999998 444322111  000 001102456899999999


Q ss_pred             HHHHccCCccCCCceeecCCcc
Q 021391          267 CYVALHPQVQGVSGEYFSDSNI  288 (313)
Q Consensus       267 ~~l~~~~~~~~~tG~~~~~~~~  288 (313)
                      ++++.++   ..+|+.+..+++
T Consensus       186 ~~~~~~~---~~~g~~~~i~~g  204 (206)
T 1hdo_A          186 LRCLTTD---EYDGHSTYPSHQ  204 (206)
T ss_dssp             HHTTSCS---TTTTCEEEEECC
T ss_pred             HHHhcCc---cccccceeeecc
Confidence            9999743   367887775543

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.86  E-value=5.8e-21  Score=174.00  Aligned_cols=218  Identities=15%  Similarity=0.093  Sum_probs=145.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      .+++|++|||||+|+||++++++|+++|++|++++|+.....+...+      -.++.++.+|++|.+++.++++..   
T Consensus        18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~------~~~~~~~~~Dl~d~~~~~~~~~~~---   88 (333)
T 2q1w_A           18 GSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKD------HPNLTFVEGSIADHALVNQLIGDL---   88 (333)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCC------CTTEEEEECCTTCHHHHHHHHHHH---
T ss_pred             cCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhh------cCCceEEEEeCCCHHHHHHHHhcc---
Confidence            36789999999999999999999999999999999975432111100      136889999999999999888753   


Q ss_pred             CCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCC
Q 021391          106 GRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDK  185 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  185 (313)
                        ++|+||||||.....   +.++++  +++|+.++.++++++.+.         ..++||++||.+.....+.... ..
T Consensus        89 --~~D~vih~A~~~~~~---~~~~~~--~~~N~~~~~~l~~a~~~~---------~~~~iV~~SS~~~~g~~~~~~~-~~  151 (333)
T 2q1w_A           89 --QPDAVVHTAASYKDP---DDWYND--TLTNCVGGSNVVQAAKKN---------NVGRFVYFQTALCYGVKPIQQP-VR  151 (333)
T ss_dssp             --CCSEEEECCCCCSCT---TCHHHH--HHHHTHHHHHHHHHHHHT---------TCSEEEEEEEGGGGCSCCCSSS-BC
T ss_pred             --CCcEEEECceecCCC---ccCChH--HHHHHHHHHHHHHHHHHh---------CCCEEEEECcHHHhCCCcccCC-CC
Confidence              699999999976432   334444  999999999999998752         1469999999766531100000 01


Q ss_pred             CCCCCCCCcc-ccchHhHHHHHHHHHH-HHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHH----------H
Q 021391          186 INDESAYNSF-GAYGQSKLANILHAKE-LAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVG----------K  253 (313)
Q Consensus       186 ~~~~~~~~~~-~~Y~asK~a~~~l~~~-la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~----------~  253 (313)
                      +++..  .+. ..|+.+|++++.+++. ++          ++..+.|+.+-.+. ....+...+.....          .
T Consensus       152 ~~E~~--~p~~~~Y~~sK~~~E~~~~~s~~----------~~~ilR~~~v~gp~-~~~~~~~~~~~~~~~~~~~~~~~~~  218 (333)
T 2q1w_A          152 LDHPR--NPANSSYAISKSANEDYLEYSGL----------DFVTFRLANVVGPR-NVSGPLPIFFQRLSEGKKCFVTKAR  218 (333)
T ss_dssp             TTSCC--CCTTCHHHHHHHHHHHHHHHHTC----------CEEEEEESEEESTT-CCSSHHHHHHHHHHTTCCCEEEECE
T ss_pred             cCCCC--CCCCCchHHHHHHHHHHHHhhhC----------CeEEEeeceEECcC-CcCcHHHHHHHHHHcCCeeeCCCce
Confidence            22222  344 7899999999999887 65          12345566554443 11112222222111          1


Q ss_pred             hhcCChHHHHHHHHHHHccCCccCCCceeecCCc
Q 021391          254 LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSN  287 (313)
Q Consensus       254 ~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~  287 (313)
                      .....++|+|+++++++..+.     |+.+..++
T Consensus       219 ~~~i~v~Dva~ai~~~~~~~~-----g~~~~v~~  247 (333)
T 2q1w_A          219 RDFVFVKDLARATVRAVDGVG-----HGAYHFSS  247 (333)
T ss_dssp             ECEEEHHHHHHHHHHHHTTCC-----CEEEECSC
T ss_pred             EeeEEHHHHHHHHHHHHhcCC-----CCEEEeCC
Confidence            224678999999999997432     66666544

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.86  E-value=3.2e-21  Score=175.75  Aligned_cols=229  Identities=15%  Similarity=0.101  Sum_probs=148.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHH--HHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDV--REAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~--~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      +|++|||||+|+||++++++|+++|++|+++.|+.+.....  ...+. .  ..++.++.+|++|.+++.++++      
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~--~~~~~~~~~Dl~d~~~~~~~~~------   79 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-E--LGDLKIFRADLTDELSFEAPIA------   79 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-G--GSCEEEEECCTTTSSSSHHHHT------
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-C--CCcEEEEecCCCChHHHHHHHc------
Confidence            68999999999999999999999999999999976543211  11221 1  2468889999999988877765      


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                       ++|+|||+|+....  . ..+..++.+++|+.++.++++++.+..        ..++||++||.++..+.+.......+
T Consensus        80 -~~D~Vih~A~~~~~--~-~~~~~~~~~~~nv~gt~~ll~aa~~~~--------~v~r~V~~SS~~~~~~~~~~~~~~~~  147 (338)
T 2rh8_A           80 -GCDFVFHVATPVHF--A-SEDPENDMIKPAIQGVVNVMKACTRAK--------SVKRVILTSSAAAVTINQLDGTGLVV  147 (338)
T ss_dssp             -TCSEEEEESSCCCC------------CHHHHHHHHHHHHHHHHCT--------TCCEEEEECCHHHHHHHHHTCSCCCC
T ss_pred             -CCCEEEEeCCccCC--C-CCCcHHHHHHHHHHHHHHHHHHHHHcC--------CcCEEEEEecHHHeecCCcCCCCccc
Confidence             58999999986421  1 112234589999999999999987532        13599999998754432211000011


Q ss_pred             CCCC--------CCC-ccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--chhHhH--------
Q 021391          187 NDES--------AYN-SFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--GILRGF--------  247 (313)
Q Consensus       187 ~~~~--------~~~-~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--~~~~~~--------  247 (313)
                      ++..        +.+ ....|+.||.+.+.+++.++.+   .|  +++++|.||.+.++.....  ......        
T Consensus       148 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g--i~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~  222 (338)
T 2rh8_A          148 DEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEE---NN--IDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNE  222 (338)
T ss_dssp             CTTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHH---HT--CCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCH
T ss_pred             ChhhccchhhccccCCccchHHHHHHHHHHHHHHHHHH---cC--CcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCc
Confidence            1111        111 1126999999988888776654   35  9999999999998865431  111100        


Q ss_pred             --HHHHHHh-------hcCChHHHHHHHHHHHccCCccCCCceeecCC
Q 021391          248 --CNTVGKL-------VLKNIPQGAATTCYVALHPQVQGVSGEYFSDS  286 (313)
Q Consensus       248 --~~~~~~~-------~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~  286 (313)
                        .......       .+..++|+|+++++++.++   ...|.++..+
T Consensus       223 ~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~---~~~~~~~~~~  267 (338)
T 2rh8_A          223 FLINGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKE---SASGRYICCA  267 (338)
T ss_dssp             HHHHHHHHHHHHHSSEEEEEHHHHHHHHHHHHHCT---TCCEEEEECS
T ss_pred             cccccccccccccCcccEEEHHHHHHHHHHHHcCC---CcCCcEEEec
Confidence              0000000       2678999999999999743   2356665443

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.85  E-value=4.5e-21  Score=173.04  Aligned_cols=215  Identities=13%  Similarity=0.075  Sum_probs=124.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      +|++|||||+|+||++++++|+++|++|++++|+.+.            +  +  ++.+|++|++++.++++..     +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------------~--~--~~~~Dl~d~~~~~~~~~~~-----~   60 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR------------P--K--FEQVNLLDSNAVHHIIHDF-----Q   60 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----------------------------------CHHHHHHH-----C
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC------------C--C--eEEecCCCHHHHHHHHHhh-----C
Confidence            5899999999999999999999999999999987532            1  1  6789999999999888865     7


Q ss_pred             eeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCC
Q 021391          109 LNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIND  188 (313)
Q Consensus       109 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~  188 (313)
                      +|+||||||....  ..+.++++..+++|+.++.++++++.+.          ++++|++||.....+ .    ...+++
T Consensus        61 ~d~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~~----------~~~~v~~SS~~v~~~-~----~~~~~E  123 (315)
T 2ydy_A           61 PHVIVHCAAERRP--DVVENQPDAASQLNVDASGNLAKEAAAV----------GAFLIYISSDYVFDG-T----NPPYRE  123 (315)
T ss_dssp             CSEEEECC---------------------CHHHHHHHHHHHHH----------TCEEEEEEEGGGSCS-S----SCSBCT
T ss_pred             CCEEEECCcccCh--hhhhcCHHHHHHHHHHHHHHHHHHHHHc----------CCeEEEEchHHHcCC-C----CCCCCC
Confidence            9999999997533  2345678899999999999999999752          359999999887544 1    112333


Q ss_pred             CCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCccccc---CCccccchhHhHH-HHH-------HHhhcC
Q 021391          189 ESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVT---NLFRYNGILRGFC-NTV-------GKLVLK  257 (313)
Q Consensus       189 ~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t---~~~~~~~~~~~~~-~~~-------~~~~~~  257 (313)
                      ..+..+...|+.+|++++.+++.++.++    ..||++.|. |+..+   ++...  +..... ...       ......
T Consensus       124 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~lR~~~v~-G~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i  196 (315)
T 2ydy_A          124 EDIPAPLNLYGKTKLDGEKAVLENNLGA----AVLRIPILY-GEVEKLEESAVTV--MFDKVQFSNKSANMDHWQQRFPT  196 (315)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHCTTC----EEEEECSEE-CSCSSGGGSTTGG--GHHHHHCCSSCEEEECSSBBCCE
T ss_pred             CCCCCCcCHHHHHHHHHHHHHHHhCCCe----EEEeeeeee-CCCCcccccHHHH--HHHHHHhcCCCeeeccCceECcE
Confidence            4444566789999999999999875433    127777766 66554   22111  111111 000       111245


Q ss_pred             ChHHHHHHHHHHHccCCccCCCceeecCCcc
Q 021391          258 NIPQGAATTCYVALHPQVQGVSGEYFSDSNI  288 (313)
Q Consensus       258 ~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~  288 (313)
                      .++|+|+++++++.++......|..+...+.
T Consensus       197 ~v~Dva~a~~~~~~~~~~~~~~~~~~~i~~~  227 (315)
T 2ydy_A          197 HVKDVATVCRQLAEKRMLDPSIKGTFHWSGN  227 (315)
T ss_dssp             EHHHHHHHHHHHHHHHHTCTTCCEEEECCCS
T ss_pred             EHHHHHHHHHHHHHhhccccCCCCeEEEcCC
Confidence            7899999999998743112345565555443

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.85  E-value=2.3e-20  Score=169.38  Aligned_cols=175  Identities=15%  Similarity=0.170  Sum_probs=135.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      |++|||||+|+||++++++|+++|++|++++|+.....+       .. ..++.++.+|++|.+++.+++++     .++
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~-~~~~~~~~~D~~~~~~~~~~~~~-----~~~   68 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHED-------AI-TEGAKFYNGDLRDKAFLRDVFTQ-----ENI   68 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG-------GS-CTTSEEEECCTTCHHHHHHHHHH-----SCE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchh-------hc-CCCcEEEECCCCCHHHHHHHHhh-----cCC
Confidence            689999999999999999999999999999987543221       11 22688999999999998888875     379


Q ss_pred             eEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCC
Q 021391          110 NILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDE  189 (313)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~  189 (313)
                      |+|||+||....  ..+.++++..+++|+.++.++++++..         ...+++|++||.+.... +.   ...+++.
T Consensus        69 d~vih~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~---------~~~~~~v~~Ss~~~~~~-~~---~~~~~E~  133 (330)
T 2c20_A           69 EAVMHFAADSLV--GVSMEKPLQYYNNNVYGALCLLEVMDE---------FKVDKFIFSSTAATYGE-VD---VDLITEE  133 (330)
T ss_dssp             EEEEECCCCCCH--HHHHHSHHHHHHHHHHHHHHHHHHHHH---------TTCCEEEEECCGGGGCS-CS---SSSBCTT
T ss_pred             CEEEECCcccCc--cccccCHHHHHHHHhHHHHHHHHHHHH---------cCCCEEEEeCCceeeCC-CC---CCCCCcC
Confidence            999999996532  123457788999999999999998742         12469999999765532 11   1123344


Q ss_pred             CCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCC
Q 021391          190 SAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNL  237 (313)
Q Consensus       190 ~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~  237 (313)
                      .+..+...|+.+|++.+.+++.++.++   |  ++++.+.||.+-++.
T Consensus       134 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~ilrp~~v~G~~  176 (330)
T 2c20_A          134 TMTNPTNTYGETKLAIEKMLHWYSQAS---N--LRYKIFRYFNVAGAT  176 (330)
T ss_dssp             SCCCCSSHHHHHHHHHHHHHHHHHHTS---S--CEEEEEECSEEECCC
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHh---C--CcEEEEecCcccCCC
Confidence            455567789999999999999988765   5  999999999987664

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.85  E-value=1.6e-20  Score=173.40  Aligned_cols=230  Identities=10%  Similarity=0.052  Sum_probs=159.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHc-CCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCC-CHHHHHHHHHH
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALR-GVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS-SLASVRKFASE  101 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s-~~~~v~~~~~~  101 (313)
                      .-++++|+||||||+|+||++++++|+++ |++|++++|+.+.......       ..++.++.+|++ |.+++.++++ 
T Consensus        19 ~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-------~~~v~~~~~Dl~~d~~~~~~~~~-   90 (372)
T 3slg_A           19 PGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK-------HERMHFFEGDITINKEWVEYHVK-   90 (372)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG-------STTEEEEECCTTTCHHHHHHHHH-
T ss_pred             CcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc-------CCCeEEEeCccCCCHHHHHHHhc-
Confidence            33467899999999999999999999999 9999999998765443221       347999999999 9999888887 


Q ss_pred             HhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          102 YNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                            ++|+|||+|+.....  ...++....+++|+.++.++++++...          +.++|++||...+.... ..
T Consensus        91 ------~~d~Vih~A~~~~~~--~~~~~~~~~~~~nv~~~~~ll~a~~~~----------~~~~v~~SS~~vyg~~~-~~  151 (372)
T 3slg_A           91 ------KCDVILPLVAIATPA--TYVKQPLRVFELDFEANLPIVRSAVKY----------GKHLVFPSTSEVYGMCA-DE  151 (372)
T ss_dssp             ------HCSEEEECBCCCCHH--HHHHCHHHHHHHHTTTTHHHHHHHHHH----------TCEEEEECCGGGGBSCC-CS
T ss_pred             ------cCCEEEEcCccccHH--HHhhCHHHHHHHHHHHHHHHHHHHHHh----------CCcEEEeCcHHHhCCCC-CC
Confidence                  589999999975431  223556688999999999999888543          25999999965443221 11


Q ss_pred             CCCCCCCC---CCC-CccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccc--------cchhHhHHH
Q 021391          182 RFDKINDE---SAY-NSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY--------NGILRGFCN  249 (313)
Q Consensus       182 ~~~~~~~~---~~~-~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~--------~~~~~~~~~  249 (313)
                      .+.+-+..   .+. .+...|+.+|.+.+.+++.++.+    |  ++++.+.|+.+-.+....        ..+...+..
T Consensus       152 ~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g--~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  225 (372)
T 3slg_A          152 QFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGME----G--LNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLG  225 (372)
T ss_dssp             SBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT----T--CEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHH
T ss_pred             CCCccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC----C--CCEEEEccccccCCCcccccccccccchHHHHHHH
Confidence            11111110   000 34458999999999999988765    6  999999999997775432        112222222


Q ss_pred             HHHHh-------------hcCChHHHHHHHHHHHccCCccCCCceeecCCc
Q 021391          250 TVGKL-------------VLKNIPQGAATTCYVALHPQVQGVSGEYFSDSN  287 (313)
Q Consensus       250 ~~~~~-------------~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~  287 (313)
                      .....             .+..++|+|++++.++.++. ....|..++..+
T Consensus       226 ~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~-~~~~~~~~ni~~  275 (372)
T 3slg_A          226 HIVRGENISLVDGGSQKRAFTYVDDGISALMKIIENSN-GVATGKIYNIGN  275 (372)
T ss_dssp             HHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCGG-GTTTTEEEEECC
T ss_pred             HHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHHHhccc-CcCCCceEEeCC
Confidence            22111             13468999999999998432 234566666544

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.85  E-value=5.3e-20  Score=169.72  Aligned_cols=223  Identities=11%  Similarity=0.022  Sum_probs=147.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHH-HHHHHHHHhC--CCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGK-DVREAIVKEI--PSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~-~~~~~l~~~~--~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      +|++|||||+|+||++++++|+++|++|++++|+.+... +..+.+....  .+.++.++.+|++|.+++.++++.+   
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence            478999999999999999999999999999999865421 1122221110  1346889999999999999998876   


Q ss_pred             CCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCC
Q 021391          106 GRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDK  185 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  185 (313)
                        ++|+||||||....  ..+.++++..+++|+.++.++++++.+...+      ++++||++||.+.+...+    ...
T Consensus        78 --~~d~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~------~~~~iv~~SS~~v~g~~~----~~~  143 (372)
T 1db3_A           78 --QPDEVYNLGAMSHV--AVSFESPEYTADVDAMGTLRLLEAIRFLGLE------KKTRFYQASTSELYGLVQ----EIP  143 (372)
T ss_dssp             --CCSEEEECCCCCTT--TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT------TTCEEEEEEEGGGGTTCC----SSS
T ss_pred             --CCCEEEECCcccCc--cccccCHHHHHHHHHHHHHHHHHHHHHhCCC------CCcEEEEeCChhhhCCCC----CCC
Confidence              68999999997533  3355678889999999999999999765321      137999999977653322    112


Q ss_pred             CCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc---chhHhHHHHHHH---------
Q 021391          186 INDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN---GILRGFCNTVGK---------  253 (313)
Q Consensus       186 ~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~---~~~~~~~~~~~~---------  253 (313)
                      +++..+..+...|+.+|++++.+++.++.+++     +.+..+.|..+..+.....   .....+......         
T Consensus       144 ~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~-----~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g  218 (372)
T 1db3_A          144 QKETTPFYPRSPYAVAKLYAYWITVNYRESYG-----MYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLG  218 (372)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEES
T ss_pred             CCccCCCCCCChHHHHHHHHHHHHHHHHHHhC-----CCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeec
Confidence            33444555677899999999999999998764     4444444444333322111   011111111110         


Q ss_pred             -----hhcCChHHHHHHHHHHHccC
Q 021391          254 -----LVLKNIPQGAATTCYVALHP  273 (313)
Q Consensus       254 -----~~~~~~~eva~~~~~l~~~~  273 (313)
                           ..+..++|+|++++.++.++
T Consensus       219 ~~~~~~~~i~v~Dva~a~~~~~~~~  243 (372)
T 1db3_A          219 NMDSLRDWGHAKDYVKMQWMMLQQE  243 (372)
T ss_dssp             CTTCEECCEEHHHHHHHHHHTTSSS
T ss_pred             CCCceeeeeEHHHHHHHHHHHHhcC
Confidence                 11346889999999988643

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.85  E-value=7.4e-20  Score=166.37  Aligned_cols=219  Identities=14%  Similarity=0.027  Sum_probs=153.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHH-HHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGK-DVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      .++++|||||+|+||++++++|+++|++|++++|+.+... ...+.+   ....++.++.+|++|.+++.++++.+    
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~----   85 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLREL---GIEGDIQYEDGDMADACSVQRAVIKA----   85 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHT---TCGGGEEEEECCTTCHHHHHHHHHHH----
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhc---cccCceEEEECCCCCHHHHHHHHHHc----
Confidence            4589999999999999999999999999999999865421 111111   11346889999999999999998876    


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                       ++|+||||||....  ..+.++++..+++|+.++.++++++.+.        +..+++|++||.+.+...+.    ..+
T Consensus        86 -~~d~Vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~~--------~~~~~~v~~SS~~v~g~~~~----~~~  150 (335)
T 1rpn_A           86 -QPQEVYNLAAQSFV--GASWNQPVTTGVVDGLGVTHLLEAIRQF--------SPETRFYQASTSEMFGLIQA----ERQ  150 (335)
T ss_dssp             -CCSEEEECCSCCCH--HHHTTSHHHHHHHHTHHHHHHHHHHHHH--------CTTSEEEEEEEGGGGCSCSS----SSB
T ss_pred             -CCCEEEECccccch--hhhhhChHHHHHHHHHHHHHHHHHHHHh--------CCCCeEEEEeCHHHhCCCCC----CCC
Confidence             78999999996432  2234567889999999999999998653        11269999999766543221    123


Q ss_pred             CCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc---hhHhHHHHHHHh---------
Q 021391          187 NDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG---ILRGFCNTVGKL---------  254 (313)
Q Consensus       187 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~---~~~~~~~~~~~~---------  254 (313)
                      ++..+..+...|+.+|++.+.+++.++.++   |  +++..+.|+.+-.+......   ....+.......         
T Consensus       151 ~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~  225 (335)
T 1rpn_A          151 DENTPFYPRSPYGVAKLYGHWITVNYRESF---G--LHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGN  225 (335)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESC
T ss_pred             CcccCCCCCChhHHHHHHHHHHHHHHHHHc---C--CcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCC
Confidence            344455566789999999999999998776   3  66677888877665432211   111111111111         


Q ss_pred             -----hcCChHHHHHHHHHHHccC
Q 021391          255 -----VLKNIPQGAATTCYVALHP  273 (313)
Q Consensus       255 -----~~~~~~eva~~~~~l~~~~  273 (313)
                           .+..++|+|++++.++.++
T Consensus       226 g~~~~~~i~v~Dva~a~~~~~~~~  249 (335)
T 1rpn_A          226 VDAKRDWGFAGDYVEAMWLMLQQD  249 (335)
T ss_dssp             TTCEEECEEHHHHHHHHHHHHHSS
T ss_pred             CcceeceEEHHHHHHHHHHHHhcC
Confidence                 1235689999999999744

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.85  E-value=5.9e-20  Score=165.59  Aligned_cols=211  Identities=15%  Similarity=0.089  Sum_probs=152.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      +|++|||||+|+||++++++|+++|++|++++|+....+  .+         ++.++.+|++ .+++.++++       +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~---------~~~~~~~Dl~-~~~~~~~~~-------~   62 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA--IN---------DYEYRVSDYT-LEDLINQLN-------D   62 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC----------------CCEEEECCCC-HHHHHHHTT-------T
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc--CC---------ceEEEEcccc-HHHHHHhhc-------C
Confidence            379999999999999999999999999999999843322  11         5889999999 888877765       7


Q ss_pred             eeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCC
Q 021391          109 LNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIND  188 (313)
Q Consensus       109 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~  188 (313)
                      +|+|||+|+.....      ..+..+++|+.++.++++++...         ...++|++||...+....    ...+++
T Consensus        63 ~d~Vih~a~~~~~~------~~~~~~~~n~~~~~~ll~a~~~~---------~~~r~v~~SS~~vyg~~~----~~~~~E  123 (311)
T 3m2p_A           63 VDAVVHLAATRGSQ------GKISEFHDNEILTQNLYDACYEN---------NISNIVYASTISAYSDET----SLPWNE  123 (311)
T ss_dssp             CSEEEECCCCCCSS------SCGGGTHHHHHHHHHHHHHHHHT---------TCCEEEEEEEGGGCCCGG----GCSBCT
T ss_pred             CCEEEEccccCCCC------ChHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEEccHHHhCCCC----CCCCCC
Confidence            99999999975432      66778999999999999888532         135899999966543221    112334


Q ss_pred             CCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHh-------------h
Q 021391          189 ESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKL-------------V  255 (313)
Q Consensus       189 ~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~-------------~  255 (313)
                      ..+..+...|+.+|.+.+.+++.++.+   .|  ++++.+.|+.+-++......+...+.......             .
T Consensus       124 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~g--~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  198 (311)
T 3m2p_A          124 KELPLPDLMYGVSKLACEHIGNIYSRK---KG--LCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKRE  198 (311)
T ss_dssp             TSCCCCSSHHHHHHHHHHHHHHHHHHH---SC--CEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEE
T ss_pred             CCCCCCCchhHHHHHHHHHHHHHHHHH---cC--CCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEc
Confidence            445556778999999999999988874   45  89999999999877655333333333332211             1


Q ss_pred             cCChHHHHHHHHHHHccCCccCCCceeecCC
Q 021391          256 LKNIPQGAATTCYVALHPQVQGVSGEYFSDS  286 (313)
Q Consensus       256 ~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~  286 (313)
                      +..++|+|++++.++.++.    .|..++..
T Consensus       199 ~v~v~Dva~a~~~~~~~~~----~~~~~~i~  225 (311)
T 3m2p_A          199 FLYAKDAAKSVIYALKQEK----VSGTFNIG  225 (311)
T ss_dssp             EEEHHHHHHHHHHHTTCTT----CCEEEEEC
T ss_pred             eEEHHHHHHHHHHHHhcCC----CCCeEEeC
Confidence            3456799999999997432    45555543

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.84  E-value=8.6e-21  Score=174.33  Aligned_cols=215  Identities=11%  Similarity=0.046  Sum_probs=151.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcC-CEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRG-VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .++++|+||||||+|+||++++++|+++| ++|++++|+.....  ...    ..  .+. +.+|+++.++++.+++.  
T Consensus        42 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~----~~--~~~-~~~d~~~~~~~~~~~~~--  110 (357)
T 2x6t_A           42 SGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVN----LV--DLN-IADYMDKEDFLIQIMAG--  110 (357)
T ss_dssp             ------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGG----TT--TSC-CSEEEEHHHHHHHHHTT--
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhc----cc--Cce-EeeecCcHHHHHHHHhh--
Confidence            34788999999999999999999999999 89999999765421  011    11  222 67899999888877763  


Q ss_pred             hcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          104 SQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      ..++++|+|||+||....    ..++++..+++|+.++.++++++.+.        + . ++|++||.+.....+.    
T Consensus       111 ~~~~~~d~Vih~A~~~~~----~~~~~~~~~~~n~~~~~~ll~a~~~~--------~-~-r~V~~SS~~v~g~~~~----  172 (357)
T 2x6t_A          111 EEFGDVEAIFHEGACSST----TEWDGKYMMDNNYQYSKELLHYCLER--------E-I-PFLYASSAATYGGRTS----  172 (357)
T ss_dssp             CCCSSCCEEEECCSCCCT----TCCCHHHHHHHTHHHHHHHHHHHHHH--------T-C-CEEEEEEGGGGCSCSS----
T ss_pred             cccCCCCEEEECCcccCC----ccCCHHHHHHHHHHHHHHHHHHHHHc--------C-C-eEEEEcchHHhCCCCC----
Confidence            235689999999997543    45678889999999999999999762        1 3 9999999876533221    


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccc----cchhHhHHHHHH-------
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY----NGILRGFCNTVG-------  252 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~----~~~~~~~~~~~~-------  252 (313)
                      ..+++..+..+...|+.+|.+.+.+++.++.++   |  ++++.|.||.+.++....    ..+...+.....       
T Consensus       173 ~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g--~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (357)
T 2x6t_A          173 DFIESREYEKPLNVFGYSKFLFDEYVRQILPEA---N--SQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKL  247 (357)
T ss_dssp             CCCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGC---S--SCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEE
T ss_pred             CCcCCcCCCCCCChhHHHHHHHHHHHHHHHHHc---C--CCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEE
Confidence            123344445566789999999999999887653   5  899999999998775431    112222222111       


Q ss_pred             -------HhhcCChHHHHHHHHHHHccC
Q 021391          253 -------KLVLKNIPQGAATTCYVALHP  273 (313)
Q Consensus       253 -------~~~~~~~~eva~~~~~l~~~~  273 (313)
                             ......++|+|+++++++.++
T Consensus       248 ~~~~~~~~~~~i~v~Dva~ai~~~~~~~  275 (357)
T 2x6t_A          248 FEGSENFKRDFVYVGDVADVNLWFLENG  275 (357)
T ss_dssp             ETTGGGCEECEEEHHHHHHHHHHHHHHC
T ss_pred             eCCCCcceEccEEHHHHHHHHHHHHhcC
Confidence                   112357899999999999744

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.84  E-value=8.3e-20  Score=168.86  Aligned_cols=221  Identities=12%  Similarity=-0.005  Sum_probs=152.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchh-----HHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAA-----GKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      |++|||||+|+||++++++|+++|++|++++|+.+.     ++...+.+... ...++.++.+|++|.+++.++++.+  
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~--  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH-IEGNMKLHYGDLTDSTCLVKIINEV--  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCHHHHHHHHHHH--
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccc-cCCCceEEEccCCCHHHHHHHHHhc--
Confidence            789999999999999999999999999999997543     22211111000 1346889999999999999998876  


Q ss_pred             cCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCC
Q 021391          105 QGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFD  184 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  184 (313)
                         ++|+||||||....  ..+.++++..+++|+.++.++++++.+...+      +.++||++||.+.....+    ..
T Consensus       102 ---~~d~vih~A~~~~~--~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~------~~~~iv~~SS~~~~~~~~----~~  166 (375)
T 1t2a_A          102 ---KPTEIYNLGAQSHV--KISFDLAEYTADVDGVGTLRLLDAVKTCGLI------NSVKFYQASTSELYGKVQ----EI  166 (375)
T ss_dssp             ---CCSEEEECCSCCCH--HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT------TTCEEEEEEEGGGTCSCS----SS
T ss_pred             ---CCCEEEECCCcccc--cccccCHHHHHHHHHHHHHHHHHHHHHhCCC------ccceEEEecchhhhCCCC----CC
Confidence               69999999996432  2234677889999999999999998765321      136999999987654322    11


Q ss_pred             CCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc---hhHhHHHHHHH--------
Q 021391          185 KINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG---ILRGFCNTVGK--------  253 (313)
Q Consensus       185 ~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~---~~~~~~~~~~~--------  253 (313)
                      .+++..+..+...|+.+|++++.+++.++.+++     +.+..+.|+.+-.|......   ....+......        
T Consensus       167 ~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~-----~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~  241 (375)
T 1t2a_A          167 PQKETTPFYPRSPYGAAKLYAYWIVVNFREAYN-----LFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSL  241 (375)
T ss_dssp             SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEE
T ss_pred             CCCccCCCCCCChhHHHHHHHHHHHHHHHHHhC-----CCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEe
Confidence            233444555667899999999999999988764     66666777665544322110   11111111111        


Q ss_pred             ------hhcCChHHHHHHHHHHHccC
Q 021391          254 ------LVLKNIPQGAATTCYVALHP  273 (313)
Q Consensus       254 ------~~~~~~~eva~~~~~l~~~~  273 (313)
                            ..+..++|+|++++.++.++
T Consensus       242 g~~~~~~~~i~v~Dva~a~~~~~~~~  267 (375)
T 1t2a_A          242 GNLDAKRDWGHAKDYVEAMWLMLQND  267 (375)
T ss_dssp             SCTTCEECCEEHHHHHHHHHHHHHSS
T ss_pred             CCCCceeeeEEHHHHHHHHHHHHhcC
Confidence                  01345899999999998744

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.84  E-value=7e-20  Score=166.97  Aligned_cols=222  Identities=12%  Similarity=0.043  Sum_probs=153.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc-CCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCH-HHHHHHHHHHhhcCC
Q 021391           30 LTAIVTGASSGIGTETARVLALR-GVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSL-ASVRKFASEYNSQGR  107 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~-~~v~~~~~~~~~~~g  107 (313)
                      |++|||||+|+||++++++|+++ |++|++++|+.+..+...       ...++.++.+|++|. +.++++++       
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~-------   66 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDISIHSEWIEYHVK-------   66 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-------TCTTEEEEECCTTTCSHHHHHHHH-------
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh-------cCCCeEEEeccccCcHHHHHhhcc-------
Confidence            57999999999999999999998 899999999876543321       134688999999984 56766665       


Q ss_pred             CeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCC
Q 021391          108 PLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIN  187 (313)
Q Consensus       108 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  187 (313)
                      ++|+|||+||.....  ...++++..+++|+.++.++++++...          +.++|++||.+.....+ ...   ++
T Consensus        67 ~~d~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~v~~SS~~v~g~~~-~~~---~~  130 (345)
T 2bll_A           67 KCDVVLPLVAIATPI--EYTRNPLRVFELDFEENLRIIRYCVKY----------RKRIIFPSTSEVYGMCS-DKY---FD  130 (345)
T ss_dssp             HCSEEEECBCCCCHH--HHHHSHHHHHHHHTHHHHHHHHHHHHT----------TCEEEEECCGGGGBTCC-CSS---BC
T ss_pred             CCCEEEEcccccCcc--chhcCHHHHHHHHHHHHHHHHHHHHHh----------CCeEEEEecHHHcCCCC-CCC---cC
Confidence            579999999975321  123466788999999999998887532          26999999976553322 111   11


Q ss_pred             CCCC-------CCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccc--------cchhHhHHHHHH
Q 021391          188 DESA-------YNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY--------NGILRGFCNTVG  252 (313)
Q Consensus       188 ~~~~-------~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~--------~~~~~~~~~~~~  252 (313)
                      +...       ..+...|+.+|.+.+.+++.++.+.   |  ++++.+.||.+-++....        ......+.....
T Consensus       131 e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  205 (345)
T 2bll_A          131 EDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---G--LQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLV  205 (345)
T ss_dssp             TTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHH
T ss_pred             CcccccccCcccCcccccHHHHHHHHHHHHHHHHhc---C--CCEEEEcCCcccCCCcccccccccccccHHHHHHHHHH
Confidence            1111       1234589999999999999988765   5  899999999998776431        111222221111


Q ss_pred             Hh-------------hcCChHHHHHHHHHHHccCCccCCCceeecCCc
Q 021391          253 KL-------------VLKNIPQGAATTCYVALHPQVQGVSGEYFSDSN  287 (313)
Q Consensus       253 ~~-------------~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~  287 (313)
                      ..             ....++|+|+++++++..+ ....+|+.+...+
T Consensus       206 ~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~-~~~~~g~~~~i~~  252 (345)
T 2bll_A          206 EGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENA-GNRCDGEIINIGN  252 (345)
T ss_dssp             HTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCG-GGTTTTEEEEECC
T ss_pred             cCCCcEEECCCCEEEEEEEHHHHHHHHHHHHhhc-cccCCCceEEeCC
Confidence            10             1347889999999999733 2335666655443

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.84  E-value=2.5e-20  Score=170.31  Aligned_cols=183  Identities=17%  Similarity=0.142  Sum_probs=135.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchh------HHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAA------GKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~------~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      +|++|||||+|+||++++++|+++|++|++++|+...      ..+..+.+.... +.++.++.+|++|.+++.+++++.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT-GRSVEFEEMDILDQGALQRLFKKY   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH-TCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhcc-CCceEEEECCCCCHHHHHHHHHhc
Confidence            5899999999999999999999999999999986432      222233333211 346889999999999998888753


Q ss_pred             hhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          103 NSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                           ++|+||||||....  ....++++..+++|+.++.++++++.    +     ...++||++||.+.+.. +.   
T Consensus        81 -----~~d~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~----~-----~~~~~iv~~SS~~~~g~-~~---  140 (348)
T 1ek6_A           81 -----SFMAVIHFAGLKAV--GESVQKPLDYYRVNLTGTIQLLEIMK----A-----HGVKNLVFSSSATVYGN-PQ---  140 (348)
T ss_dssp             -----CEEEEEECCSCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHH----H-----TTCCEEEEEEEGGGGCS-CS---
T ss_pred             -----CCCEEEECCCCcCc--cchhhchHHHHHHHHHHHHHHHHHHH----H-----hCCCEEEEECcHHHhCC-CC---
Confidence                 79999999996532  12345678899999999999998754    2     12469999999766532 11   


Q ss_pred             CCCCCCCCCCCc-cccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccC
Q 021391          183 FDKINDESAYNS-FGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTN  236 (313)
Q Consensus       183 ~~~~~~~~~~~~-~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~  236 (313)
                      ...+++..+..+ ...|+.+|++++.+++.++.+  ..+  +++..+.|+.+-.+
T Consensus       141 ~~~~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~--~~~~~lR~~~v~G~  191 (348)
T 1ek6_A          141 YLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKT--WNAVLLRYFNPTGA  191 (348)
T ss_dssp             SSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTT--CEEEEEEECEEECC
T ss_pred             CCCcCCCCCCCCCCCchHHHHHHHHHHHHHHHhc--CCC--cceEEEeeccccCC
Confidence            112233333333 678999999999999999887  335  88999999888655

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.84  E-value=3.2e-20  Score=167.04  Aligned_cols=210  Identities=14%  Similarity=0.108  Sum_probs=151.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHc--CCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           29 GLTAIVTGASSGIGTETARVLALR--GVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~--G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      +|++|||||+|+||++++++|+++  |++|++++|+....+     +.     .++.++.+|++|.+++.+++++.    
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~-----~~~~~~~~D~~d~~~~~~~~~~~----   67 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VV-----NSGPFEVVNALDFNQIEHLVEVH----   67 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HH-----HSSCEEECCTTCHHHHHHHHHHT----
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----cc-----CCCceEEecCCCHHHHHHHHhhc----
Confidence            478999999999999999999999  899999999865522     11     13668899999999998888764    


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                       ++|+|||+||....   ...++.+..+++|+.++.++++++.+.         ..+++|++||...+.+.+..   ...
T Consensus        68 -~~d~vih~a~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~SS~~~~~~~~~~---~~~  131 (312)
T 2yy7_A           68 -KITDIYLMAALLSA---TAEKNPAFAWDLNMNSLFHVLNLAKAK---------KIKKIFWPSSIAVFGPTTPK---ENT  131 (312)
T ss_dssp             -TCCEEEECCCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHHTT---------SCSEEECCEEGGGCCTTSCS---SSB
T ss_pred             -CCCEEEECCccCCC---chhhChHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEeccHHHhCCCCCC---CCc
Confidence             79999999996432   123567888999999999999988542         13599999998765432211   122


Q ss_pred             CCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----c-hhHhHHHHHHHh-------
Q 021391          187 NDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----G-ILRGFCNTVGKL-------  254 (313)
Q Consensus       187 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----~-~~~~~~~~~~~~-------  254 (313)
                      ++..+..+...|+.+|.+.+.+++.++.++   |  ++++.+.||.+-.+.....    . ....+.......       
T Consensus       132 ~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (312)
T 2yy7_A          132 PQYTIMEPSTVYGISKQAGERWCEYYHNIY---G--VDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLS  206 (312)
T ss_dssp             CSSCBCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSC
T ss_pred             cccCcCCCCchhHHHHHHHHHHHHHHHHhc---C--CcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecC
Confidence            333344566789999999999999988765   5  8999999999877542211    1 111111111111       


Q ss_pred             -----hcCChHHHHHHHHHHHccC
Q 021391          255 -----VLKNIPQGAATTCYVALHP  273 (313)
Q Consensus       255 -----~~~~~~eva~~~~~l~~~~  273 (313)
                           .+..++|+|++++.++.++
T Consensus       207 ~~~~~~~i~v~Dva~a~~~~~~~~  230 (312)
T 2yy7_A          207 SETKMPMMYMDDAIDATINIMKAP  230 (312)
T ss_dssp             TTCCEEEEEHHHHHHHHHHHHHSC
T ss_pred             CCceeeeeeHHHHHHHHHHHHhCc
Confidence                 1235699999999999744

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.83  E-value=2e-19  Score=171.93  Aligned_cols=218  Identities=17%  Similarity=0.172  Sum_probs=152.2

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHc---CCEEEEEecCchhHHHHHHHHHHhCC--------------CCceEEE
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALR---GVHVIMAVRNMAAGKDVREAIVKEIP--------------SAKVDAM   85 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~---G~~V~l~~r~~~~~~~~~~~l~~~~~--------------~~~~~~~   85 (313)
                      .....++|+||||||+|+||++++++|+++   |++|++++|+.+... ..+.+.....              ..++.++
T Consensus        67 ~~~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v  145 (478)
T 4dqv_A           67 PGPSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDED-ARRRLEKTFDSGDPELLRHFKELAADRLEVV  145 (478)
T ss_dssp             CCCCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHH-HHHHHHGGGCSSCHHHHHHHHHHHTTTEEEE
T ss_pred             CCCCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHH-HHHHHHHHHHhcchhhhhhhhhhccCceEEE
Confidence            345578999999999999999999999999   999999999876432 2222322221              2579999


Q ss_pred             EccCC------CHHHHHHHHHHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccC
Q 021391           86 ELDVS------SLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKS  159 (313)
Q Consensus        86 ~~D~s------~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~  159 (313)
                      .+|++      +.+++..+++       ++|+||||||....      +.++..+++|+.++.++++.+...        
T Consensus       146 ~~Dl~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~------~~~~~~~~~Nv~gt~~ll~aa~~~--------  204 (478)
T 4dqv_A          146 AGDKSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA------FPYHELFGPNVAGTAELIRIALTT--------  204 (478)
T ss_dssp             ECCTTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB------SSCCEEHHHHHHHHHHHHHHHTSS--------
T ss_pred             EeECCCcccCCCHHHHHHHHc-------CCCEEEECccccCC------cCHHHHHHHHHHHHHHHHHHHHhC--------
Confidence            99999      5566766665       58999999997532      566788999999999999987531        


Q ss_pred             CCCCeEEEECCccccccccCCCCCCCCCCCCCCC-----------ccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEe
Q 021391          160 SREGRIVNVSSEAHRFAYSEGIRFDKINDESAYN-----------SFGAYGQSKLANILHAKELAKHLKEDGVNITANSL  228 (313)
Q Consensus       160 ~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i  228 (313)
                       ...++|++||.+......    ...+.++....           ....|+.||.+.+.+++.++.+.   |  ++++.+
T Consensus       205 -~~~~~V~iSS~~v~~~~~----~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~iv  274 (478)
T 4dqv_A          205 -KLKPFTYVSTADVGAAIE----PSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---A--LPVAVF  274 (478)
T ss_dssp             -SCCCEEEEEEGGGGTTSC----TTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---C--CCEEEE
T ss_pred             -CCCeEEEEeehhhcCccC----CCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---C--CCeEEE
Confidence             235899999976533211    11122222111           12459999999999999988765   5  899999


Q ss_pred             eCcccccCCc-----cccchhHhHHHHHHHh---------------------hcCChHHHHHHHHHHHcc
Q 021391          229 HPGSIVTNLF-----RYNGILRGFCNTVGKL---------------------VLKNIPQGAATTCYVALH  272 (313)
Q Consensus       229 ~PG~v~t~~~-----~~~~~~~~~~~~~~~~---------------------~~~~~~eva~~~~~l~~~  272 (313)
                      .||.|-.+..     ....+...+.......                     .....+++|++++.++.+
T Consensus       275 Rpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~  344 (478)
T 4dqv_A          275 RCGMILADTSYAGQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGAR  344 (478)
T ss_dssp             EECEEECCSSSSSCCCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHT
T ss_pred             ECceeeCCCccCCcCCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhh
Confidence            9999966532     2223333333222111                     124578999999999863

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.83  E-value=9.9e-21  Score=162.40  Aligned_cols=211  Identities=12%  Similarity=-0.020  Sum_probs=141.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      +++|||||+|+||++++++|+++|++|++++|+.++.....        ..++.++.+|++|+++  ..       ++++
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------~~~~~~~~~D~~d~~~--~~-------~~~~   63 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL--------GATVATLVKEPLVLTE--AD-------LDSV   63 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT--------CTTSEEEECCGGGCCH--HH-------HTTC
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc--------CCCceEEecccccccH--hh-------cccC
Confidence            36999999999999999999999999999999977655331        3478999999999987  22       2479


Q ss_pred             eEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCC
Q 021391          110 NILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDE  189 (313)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~  189 (313)
                      |+||||+|....+         ....+|+.+..++++++    .+     . ++++|++||.++..+.+... +...+++
T Consensus        64 d~vi~~ag~~~~~---------~~~~~n~~~~~~l~~a~----~~-----~-~~~~v~~SS~~~~~~~~~~~-~~~~~~~  123 (224)
T 3h2s_A           64 DAVVDALSVPWGS---------GRGYLHLDFATHLVSLL----RN-----S-DTLAVFILGSASLAMPGADH-PMILDFP  123 (224)
T ss_dssp             SEEEECCCCCTTS---------SCTHHHHHHHHHHHHTC----TT-----C-CCEEEEECCGGGSBCTTCSS-CGGGGCC
T ss_pred             CEEEECCccCCCc---------chhhHHHHHHHHHHHHH----HH-----c-CCcEEEEecceeeccCCCCc-cccccCC
Confidence            9999999976211         12456777776666554    33     2 37999999987766544211 1111122


Q ss_pred             CCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhH---hHHHHHHHhhcCChHHHHHHH
Q 021391          190 SAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILR---GFCNTVGKLVLKNIPQGAATT  266 (313)
Q Consensus       190 ~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~eva~~~  266 (313)
                      ....+...|+.+|.+.+.+    .......|  ++++.|+||.+.++..... +..   .............++|+|+++
T Consensus       124 ~~~~~~~~y~~sK~~~e~~----~~~~~~~~--i~~~ivrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~i~~~DvA~~~  196 (224)
T 3h2s_A          124 ESAASQPWYDGALYQYYEY----QFLQMNAN--VNWIGISPSEAFPSGPATS-YVAGKDTLLVGEDGQSHITTGNMALAI  196 (224)
T ss_dssp             GGGGGSTTHHHHHHHHHHH----HHHTTCTT--SCEEEEEECSBCCCCCCCC-EEEESSBCCCCTTSCCBCCHHHHHHHH
T ss_pred             CCCccchhhHHHHHHHHHH----HHHHhcCC--CcEEEEcCccccCCCcccC-ceecccccccCCCCCceEeHHHHHHHH
Confidence            2222366899999988854    22234567  9999999999987732211 110   000000112357899999999


Q ss_pred             HHHHccCCccCCCceeecCCc
Q 021391          267 CYVALHPQVQGVSGEYFSDSN  287 (313)
Q Consensus       267 ~~l~~~~~~~~~tG~~~~~~~  287 (313)
                      +.++.++.   ..|+.+...+
T Consensus       197 ~~~l~~~~---~~g~~~~~~~  214 (224)
T 3h2s_A          197 LDQLEHPT---AIRDRIVVRD  214 (224)
T ss_dssp             HHHHHSCC---CTTSEEEEEE
T ss_pred             HHHhcCcc---ccCCEEEEec
Confidence            99998543   3466666443

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.83  E-value=9.6e-20  Score=155.66  Aligned_cols=215  Identities=13%  Similarity=0.092  Sum_probs=131.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      ++||||||+|+||++++++|+++|++|++++|+.++.+...         .++.++.+|++|+++  +.       ++++
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---------~~~~~~~~D~~d~~~--~~-------~~~~   62 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH---------KDINILQKDIFDLTL--SD-------LSDQ   62 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC---------SSSEEEECCGGGCCH--HH-------HTTC
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc---------CCCeEEeccccChhh--hh-------hcCC
Confidence            46999999999999999999999999999999977654321         468899999999987  22       2479


Q ss_pred             eEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCC
Q 021391          110 NILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDE  189 (313)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~  189 (313)
                      |+||||+|....           ...+|+.+...+++    .+.+     ...+++|++||..+..+.+... +  ..+.
T Consensus        63 d~vi~~ag~~~~-----------~~~~~~~~~~~l~~----a~~~-----~~~~~~v~~SS~~~~~~~~~~~-~--~~~~  119 (221)
T 3ew7_A           63 NVVVDAYGISPD-----------EAEKHVTSLDHLIS----VLNG-----TVSPRLLVVGGAASLQIDEDGN-T--LLES  119 (221)
T ss_dssp             SEEEECCCSSTT-----------TTTSHHHHHHHHHH----HHCS-----CCSSEEEEECCCC-----------------
T ss_pred             CEEEECCcCCcc-----------ccchHHHHHHHHHH----HHHh-----cCCceEEEEecceEEEcCCCCc-c--cccc
Confidence            999999997322           13446555555544    4444     3367999999988776544211 0  1112


Q ss_pred             CCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhH---hHHHHHHHhhcCChHHHHHHH
Q 021391          190 SAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILR---GFCNTVGKLVLKNIPQGAATT  266 (313)
Q Consensus       190 ~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~eva~~~  266 (313)
                      ....+...|+.+|.+.+.+. .+..  ...|  ++++.|+||.+.++......+..   .+..........+++|+|+++
T Consensus       120 ~~~~~~~~y~~~k~~~e~~~-~~~~--~~~g--i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  194 (221)
T 3ew7_A          120 KGLREAPYYPTARAQAKQLE-HLKS--HQAE--FSWTYISPSAMFEPGERTGDYQIGKDHLLFGSDGNSFISMEDYAIAV  194 (221)
T ss_dssp             -----CCCSCCHHHHHHHHH-HHHT--TTTT--SCEEEEECSSCCCCC---------------------CCCHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHH-HHHh--hccC--ccEEEEeCcceecCCCccCceEeccccceecCCCCceEeHHHHHHHH
Confidence            22224467999999988762 2211  1566  99999999999877221111110   000001112367899999999


Q ss_pred             HHHHccCCccCCCceeecCCcccCCCc
Q 021391          267 CYVALHPQVQGVSGEYFSDSNIYKPNS  293 (313)
Q Consensus       267 ~~l~~~~~~~~~tG~~~~~~~~~~~~~  293 (313)
                      +.++.++.   ..|+.+...+..++++
T Consensus       195 ~~~l~~~~---~~g~~~~~~~~~~~~~  218 (221)
T 3ew7_A          195 LDEIERPN---HLNEHFTVAGKLEHHH  218 (221)
T ss_dssp             HHHHHSCS---CTTSEEECCC------
T ss_pred             HHHHhCcc---ccCCEEEECCCCcccc
Confidence            99998543   4577777776666554

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.83  E-value=2.2e-19  Score=164.01  Aligned_cols=215  Identities=12%  Similarity=0.056  Sum_probs=145.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      ..++++++|||||+|+||++++++|+++|++|++++|+........+.+   ....++.++.+|+.+..           
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~-----------   88 (343)
T 2b69_A           23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW---IGHENFELINHDVVEPL-----------   88 (343)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGG---TTCTTEEEEECCTTSCC-----------
T ss_pred             cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhh---ccCCceEEEeCccCChh-----------
Confidence            4478899999999999999999999999999999999753321111111   11346889999998852           


Q ss_pred             cCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCC
Q 021391          105 QGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFD  184 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  184 (313)
                       +.++|+|||+||......  ..++.+..+++|+.++.++++++...          +.++|++||.+.+.... ....+
T Consensus        89 -~~~~d~vih~A~~~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~----------~~~~v~~SS~~v~g~~~-~~~~~  154 (343)
T 2b69_A           89 -YIEVDQIYHLASPASPPN--YMYNPIKTLKTNTIGTLNMLGLAKRV----------GARLLLASTSEVYGDPE-VHPQS  154 (343)
T ss_dssp             -CCCCSEEEECCSCCSHHH--HTTCHHHHHHHHHHHHHHHHHHHHHH----------TCEEEEEEEGGGGBSCS-SSSBC
T ss_pred             -hcCCCEEEECccccCchh--hhhCHHHHHHHHHHHHHHHHHHHHHh----------CCcEEEECcHHHhCCCC-CCCCc
Confidence             457999999999653211  23456788999999999999988642          24899999976543211 11111


Q ss_pred             C--CCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccc--cchhHhHHHHHHHh------
Q 021391          185 K--INDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY--NGILRGFCNTVGKL------  254 (313)
Q Consensus       185 ~--~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~--~~~~~~~~~~~~~~------  254 (313)
                      +  .....+..+...|+.+|++.+.+++.++.+.   |  ++++.+.||.+-++....  ..+...+.......      
T Consensus       155 E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (343)
T 2b69_A          155 EDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE---G--VEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVY  229 (343)
T ss_dssp             TTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEE
T ss_pred             ccccccCCCCCCCCchHHHHHHHHHHHHHHHHHh---C--CcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEc
Confidence            1  1111344456789999999999999988765   5  889999999998775432  11222222211111      


Q ss_pred             -------hcCChHHHHHHHHHHHcc
Q 021391          255 -------VLKNIPQGAATTCYVALH  272 (313)
Q Consensus       255 -------~~~~~~eva~~~~~l~~~  272 (313)
                             .+..++|+|++++.++..
T Consensus       230 ~~~~~~~~~v~v~Dva~a~~~~~~~  254 (343)
T 2b69_A          230 GSGSQTRAFQYVSDLVNGLVALMNS  254 (343)
T ss_dssp             SSSCCEEECEEHHHHHHHHHHHHTS
T ss_pred             CCCCeEEeeEeHHHHHHHHHHHHhc
Confidence                   134789999999999863

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.82  E-value=1.4e-21  Score=166.60  Aligned_cols=185  Identities=15%  Similarity=0.057  Sum_probs=138.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      .+|++|||||+|+||++++++|+++|+  +|++++|+.+.          .  ..++.++.+|+++.+++.+++      
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~--~~~~~~~~~D~~~~~~~~~~~------   65 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------E--HPRLDNPVGPLAELLPQLDGS------   65 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------C--CTTEECCBSCHHHHGGGCCSC------
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------c--CCCceEEeccccCHHHHHHhh------
Confidence            578999999999999999999999998  99999998764          1  346788899999887654432      


Q ss_pred             CCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCC
Q 021391          106 GRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDK  185 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  185 (313)
                         +|+||||+|....    ..+.++..+++|+.++..+++++.+.         ..+++|++||......         
T Consensus        66 ---~d~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~Ss~~~~~~---------  120 (215)
T 2a35_A           66 ---IDTAFCCLGTTIK----EAGSEEAFRAVDFDLPLAVGKRALEM---------GARHYLVVSALGADAK---------  120 (215)
T ss_dssp             ---CSEEEECCCCCHH----HHSSHHHHHHHHTHHHHHHHHHHHHT---------TCCEEEEECCTTCCTT---------
T ss_pred             ---hcEEEECeeeccc----cCCCHHHHHHhhHHHHHHHHHHHHHc---------CCCEEEEECCcccCCC---------
Confidence               8999999996432    24578889999999999999987542         2458999999776532         


Q ss_pred             CCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEE-EEEeeCcccccCCccccchhHhHH----HHH-HHhhcCCh
Q 021391          186 INDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNIT-ANSLHPGSIVTNLFRYNGILRGFC----NTV-GKLVLKNI  259 (313)
Q Consensus       186 ~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~-vn~i~PG~v~t~~~~~~~~~~~~~----~~~-~~~~~~~~  259 (313)
                              +...|+.+|++++.+++.       .|  ++ ++.++||.+.++..... +...+.    ... .......+
T Consensus       121 --------~~~~y~~sK~~~e~~~~~-------~~--~~~~~~vrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~i~~  182 (215)
T 2a35_A          121 --------SSIFYNRVKGELEQALQE-------QG--WPQLTIARPSLLFGPREEFR-LAEILAAPIARILPGKYHGIEA  182 (215)
T ss_dssp             --------CSSHHHHHHHHHHHHHTT-------SC--CSEEEEEECCSEESTTSCEE-GGGGTTCCCC----CHHHHHHH
T ss_pred             --------CccHHHHHHHHHHHHHHH-------cC--CCeEEEEeCceeeCCCCcch-HHHHHHHhhhhccCCCcCcEeH
Confidence                    345799999999988775       26  88 99999999988754311 111100    000 02234578


Q ss_pred             HHHHHHHHHHHccC
Q 021391          260 PQGAATTCYVALHP  273 (313)
Q Consensus       260 ~eva~~~~~l~~~~  273 (313)
                      +|+|+.++.++.++
T Consensus       183 ~Dva~~~~~~~~~~  196 (215)
T 2a35_A          183 CDLARALWRLALEE  196 (215)
T ss_dssp             HHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHhcC
Confidence            99999999999744

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.82  E-value=1.9e-19  Score=162.33  Aligned_cols=219  Identities=18%  Similarity=0.193  Sum_probs=151.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc--CCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           31 TAIVTGASSGIGTETARVLALR--GVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~--G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      ++|||||+|+||++++++|+++  |++|++++|+....+             ++.++.+|++|++++.+++++.     +
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-------------~~~~~~~D~~d~~~~~~~~~~~-----~   62 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-------------GIKFITLDVSNRDEIDRAVEKY-----S   62 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-------------TCCEEECCTTCHHHHHHHHHHT-----T
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-------------CceEEEecCCCHHHHHHHHhhc-----C
Confidence            4899999999999999999999  889999998754321             3568899999999998888752     7


Q ss_pred             eeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCC
Q 021391          109 LNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIND  188 (313)
Q Consensus       109 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~  188 (313)
                      +|+|||+|+....   ...++++..+++|+.++.++++++.+.         ..+++|++||.....+...   ....++
T Consensus        63 ~d~vih~a~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~~~---------~~~~~v~~SS~~~~~~~~~---~~~~~e  127 (317)
T 3ajr_A           63 IDAIFHLAGILSA---KGEKDPALAYKVNMNGTYNILEAAKQH---------RVEKVVIPSTIGVFGPETP---KNKVPS  127 (317)
T ss_dssp             CCEEEECCCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHHHT---------TCCEEEEEEEGGGCCTTSC---SSSBCS
T ss_pred             CcEEEECCcccCC---ccccChHHHhhhhhHHHHHHHHHHHHc---------CCCEEEEecCHHHhCCCCC---CCCccc
Confidence            9999999996432   123567788999999999999987542         1459999999876543211   111233


Q ss_pred             CCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCc-cc---cch-hHhHHHHHHHh---------
Q 021391          189 ESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLF-RY---NGI-LRGFCNTVGKL---------  254 (313)
Q Consensus       189 ~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~-~~---~~~-~~~~~~~~~~~---------  254 (313)
                      ..+..+...|+.+|.+.+.+++.++.+.   |  ++++.+.|+.+-.+.. ..   ..+ ...+.......         
T Consensus       128 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (317)
T 3ajr_A          128 ITITRPRTMFGVTKIAAELLGQYYYEKF---G--LDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPN  202 (317)
T ss_dssp             SSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTT
T ss_pred             cccCCCCchHHHHHHHHHHHHHHHHHhc---C--CeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCcc
Confidence            3445567789999999999999887654   5  8999997655433221 11   111 11111111111         


Q ss_pred             ---hcCChHHHHHHHHHHHccCCccCCCceeecCCc
Q 021391          255 ---VLKNIPQGAATTCYVALHPQVQGVSGEYFSDSN  287 (313)
Q Consensus       255 ---~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~  287 (313)
                         .....+|+|++++.++.++.....+|..+...+
T Consensus       203 ~~~~~i~v~Dva~a~~~~l~~~~~~~~~g~~~~i~~  238 (317)
T 3ajr_A          203 RALPMMYMPDALKALVDLYEADRDKLVLRNGYNVTA  238 (317)
T ss_dssp             CCEEEEEHHHHHHHHHHHHHCCGGGCSSCSCEECCS
T ss_pred             ceeeeeEHHHHHHHHHHHHhCCccccccCceEecCC
Confidence               123578999999999875544444555555443

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.82  E-value=1.7e-19  Score=160.86  Aligned_cols=198  Identities=20%  Similarity=0.205  Sum_probs=142.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      .+++|||||+|+||++++++|+++|++|++++|+                       .+|++|.+++.++++++     +
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~Dl~d~~~~~~~~~~~-----~   63 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-----------------------DLDITNVLAVNKFFNEK-----K   63 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT-----------------------TCCTTCHHHHHHHHHHH-----C
T ss_pred             cceEEEECCCChHHHHHHHHHHhCCCeEEeccCc-----------------------cCCCCCHHHHHHHHHhc-----C
Confidence            4899999999999999999999999999999986                       37999999999988865     7


Q ss_pred             eeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCC
Q 021391          109 LNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIND  188 (313)
Q Consensus       109 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~  188 (313)
                      +|+||||||....  ..+.++++..+++|+.++.++++++.+.          +.++|++||.+.+.+.+.    ..+++
T Consensus        64 ~d~vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~l~~a~~~~----------~~~iv~~SS~~v~~~~~~----~~~~E  127 (292)
T 1vl0_A           64 PNVVINCAAHTAV--DKCEEQYDLAYKINAIGPKNLAAAAYSV----------GAEIVQISTDYVFDGEAK----EPITE  127 (292)
T ss_dssp             CSEEEECCCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHH----------TCEEEEEEEGGGSCSCCS----SCBCT
T ss_pred             CCEEEECCccCCH--HHHhcCHHHHHHHHHHHHHHHHHHHHHc----------CCeEEEechHHeECCCCC----CCCCC
Confidence            9999999996432  2234678899999999999999998652          239999999876543221    12334


Q ss_pred             CCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHH-----------hhcC
Q 021391          189 ESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGK-----------LVLK  257 (313)
Q Consensus       189 ~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~-----------~~~~  257 (313)
                      ..+..+...|+.+|++.+.+++.++.         .+..+.|+.+-++ ..  .+...+......           ....
T Consensus       128 ~~~~~~~~~Y~~sK~~~E~~~~~~~~---------~~~~lR~~~v~G~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i  195 (292)
T 1vl0_A          128 FDEVNPQSAYGKTKLEGENFVKALNP---------KYYIVRTAWLYGD-GN--NFVKTMINLGKTHDELKVVHDQVGTPT  195 (292)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHCS---------SEEEEEECSEESS-SS--CHHHHHHHHHHHCSEEEEESSCEECCE
T ss_pred             CCCCCCccHHHHHHHHHHHHHHhhCC---------CeEEEeeeeeeCC-Cc--ChHHHHHHHHhcCCcEEeecCeeeCCc
Confidence            44445667899999999999888653         2345666666544 11  222222221111           1234


Q ss_pred             ChHHHHHHHHHHHccCCccCCCceeecCCc
Q 021391          258 NIPQGAATTCYVALHPQVQGVSGEYFSDSN  287 (313)
Q Consensus       258 ~~~eva~~~~~l~~~~~~~~~tG~~~~~~~  287 (313)
                      .++|+|+++++++..+     +|..+...+
T Consensus       196 ~v~Dva~~~~~~~~~~-----~~~~~~i~~  220 (292)
T 1vl0_A          196 STVDLARVVLKVIDEK-----NYGTFHCTC  220 (292)
T ss_dssp             EHHHHHHHHHHHHHHT-----CCEEEECCC
T ss_pred             cHHHHHHHHHHHHhcC-----CCcEEEecC
Confidence            6899999999999743     455555543

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.82  E-value=4.4e-19  Score=175.97  Aligned_cols=225  Identities=12%  Similarity=0.039  Sum_probs=157.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHc-CCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHH-HHHHHHHHhh
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALR-GVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLAS-VRKFASEYNS  104 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~-v~~~~~~~~~  104 (313)
                      +++|++|||||+|+||++++++|+++ |++|++++|+.+..+...       ...++.++.+|++|.++ ++.+++    
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~-------~~~~v~~v~~Dl~d~~~~~~~~~~----  381 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDISIHSEWIEYHVK----  381 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT-------TCTTEEEEECCTTTCHHHHHHHHH----
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc-------cCCceEEEECCCCCcHHHHHHhhc----
Confidence            57899999999999999999999998 899999999876543211       13478899999999765 555554    


Q ss_pred             cCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCC
Q 021391          105 QGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFD  184 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  184 (313)
                         ++|+||||||.....  ...++++..+++|+.++.++++++...          +.++|++||...+...+ ..   
T Consensus       382 ---~~D~Vih~Aa~~~~~--~~~~~~~~~~~~Nv~gt~~ll~aa~~~----------~~r~V~~SS~~vyg~~~-~~---  442 (660)
T 1z7e_A          382 ---KCDVVLPLVAIATPI--EYTRNPLRVFELDFEENLRIIRYCVKY----------RKRIIFPSTSEVYGMCS-DK---  442 (660)
T ss_dssp             ---HCSEEEECCCCCCTH--HHHHSHHHHHHHHTHHHHHHHHHHHHT----------TCEEEEECCGGGGBTCC-SS---
T ss_pred             ---CCCEEEECceecCcc--ccccCHHHHHHhhhHHHHHHHHHHHHh----------CCEEEEEecHHHcCCCC-Cc---
Confidence               589999999975431  123466788999999999998888542          26999999976653322 11   


Q ss_pred             CCCCCCC-------CCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccc--------cchhHhHHH
Q 021391          185 KINDESA-------YNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY--------NGILRGFCN  249 (313)
Q Consensus       185 ~~~~~~~-------~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~--------~~~~~~~~~  249 (313)
                      .+++..+       ..+...|+.+|.+.+.+++.++.+.   |  ++++.+.||.+.++....        ..+...+..
T Consensus       443 ~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~  517 (660)
T 1z7e_A          443 YFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---G--LQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLIL  517 (660)
T ss_dssp             SBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHH
T ss_pred             ccCCCccccccCcccCCCCCcHHHHHHHHHHHHHHHHHc---C--CCEEEECCCcccCCCccccccccccccchHHHHHH
Confidence            1111111       1234579999999999999998765   5  899999999998876432        112222222


Q ss_pred             HHHHh-------------hcCChHHHHHHHHHHHccCCccCCCceeecCCc
Q 021391          250 TVGKL-------------VLKNIPQGAATTCYVALHPQVQGVSGEYFSDSN  287 (313)
Q Consensus       250 ~~~~~-------------~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~  287 (313)
                      .....             .+..++|+|+++++++.. .....+|+.+..++
T Consensus       518 ~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~-~~~~~~g~~~ni~~  567 (660)
T 1z7e_A          518 NLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIEN-AGNRCDGEIINIGN  567 (660)
T ss_dssp             HHHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHHC-GGGTTTTEEEEECC
T ss_pred             HHHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHhC-ccccCCCeEEEECC
Confidence            21111             134589999999999973 33345677666554

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.81  E-value=2e-19  Score=158.76  Aligned_cols=189  Identities=17%  Similarity=0.126  Sum_probs=138.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      +++|||||+|+||++++++|+ +|++|++++|+.+..           ++     +.+|++|++++.++++.+     ++
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~-----------~~-----~~~Dl~~~~~~~~~~~~~-----~~   58 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ-----------GG-----YKLDLTDFPRLEDFIIKK-----RP   58 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT-----------TC-----EECCTTSHHHHHHHHHHH-----CC
T ss_pred             CEEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC-----------CC-----ceeccCCHHHHHHHHHhc-----CC
Confidence            369999999999999999999 589999999986420           12     789999999999998876     79


Q ss_pred             eEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCC
Q 021391          110 NILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDE  189 (313)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~  189 (313)
                      |+||||||....  ..+.++++..+++|+.++.++++++.+   .       ++++|++||..+..+.+.     .+++.
T Consensus        59 d~vi~~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~---~-------~~~iv~~SS~~~~~~~~~-----~~~e~  121 (273)
T 2ggs_A           59 DVIINAAAMTDV--DKCEIEKEKAYKINAEAVRHIVRAGKV---I-------DSYIVHISTDYVFDGEKG-----NYKEE  121 (273)
T ss_dssp             SEEEECCCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHH---T-------TCEEEEEEEGGGSCSSSC-----SBCTT
T ss_pred             CEEEECCcccCh--hhhhhCHHHHHHHhHHHHHHHHHHHHH---h-------CCeEEEEecceeEcCCCC-----CcCCC
Confidence            999999996532  233567889999999999999999853   1       359999999887654321     23333


Q ss_pred             CCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHH----------HhhcCCh
Q 021391          190 SAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVG----------KLVLKNI  259 (313)
Q Consensus       190 ~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~----------~~~~~~~  259 (313)
                      ....+...|+.+|++++.+++.    +....  ||++.|. |  .+++      ...+.....          ......+
T Consensus       122 ~~~~~~~~Y~~sK~~~e~~~~~----~~~~~--iR~~~v~-G--~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (273)
T 2ggs_A          122 DIPNPINYYGLSKLLGETFALQ----DDSLI--IRTSGIF-R--NKGF------PIYVYKTLKEGKTVFAFKGYYSPISA  186 (273)
T ss_dssp             SCCCCSSHHHHHHHHHHHHHCC----TTCEE--EEECCCB-S--SSSH------HHHHHHHHHTTCCEEEESCEECCCBH
T ss_pred             CCCCCCCHHHHHHHHHHHHHhC----CCeEE--Eeccccc-c--ccHH------HHHHHHHHHcCCCEEeecCCCCceEH
Confidence            4445567899999999999887    33233  7777776 4  2221      111111111          1235789


Q ss_pred             HHHHHHHHHHHcc
Q 021391          260 PQGAATTCYVALH  272 (313)
Q Consensus       260 ~eva~~~~~l~~~  272 (313)
                      +|+|+++++++.+
T Consensus       187 ~dva~~i~~~~~~  199 (273)
T 2ggs_A          187 RKLASAILELLEL  199 (273)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhc
Confidence            9999999999974

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.81  E-value=3.1e-19  Score=162.52  Aligned_cols=180  Identities=19%  Similarity=0.119  Sum_probs=127.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      +++|||||+|+||++++++|+++|++|++++|......+..+.+.... +.++.++.+|++|++++.+++++.     ++
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~-----~~   74 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG-GKHPTFVEGDIRNEALMTEILHDH-----AI   74 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH-TSCCEEEECCTTCHHHHHHHHHHT-----TC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhc-CCcceEEEccCCCHHHHHHHhhcc-----CC
Confidence            379999999999999999999999999999874322112222222211 346788999999999998888752     69


Q ss_pred             eEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCC
Q 021391          110 NILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDE  189 (313)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~  189 (313)
                      |+||||||....  ....+..+..+++|+.++.++++++...         ..++||++||.+.... +..   ..+++.
T Consensus        75 D~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~iv~~SS~~~~g~-~~~---~~~~e~  139 (338)
T 1udb_A           75 DTVIHFAGLKAV--GESVQKPLEYYDNNVNGTLRLISAMRAA---------NVKNFIFSSSATVYGD-NPK---IPYVES  139 (338)
T ss_dssp             SEEEECCSCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHHHH---------TCCEEEEEEEGGGGCS-CCS---SSBCTT
T ss_pred             CEEEECCccCcc--ccchhcHHHHHHHHHHHHHHHHHHHHhc---------CCCeEEEEccHHHhCC-CCC---CCcCcc
Confidence            999999996532  1123456778999999999998865421         1469999999765432 111   112222


Q ss_pred             CCC-CccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccc
Q 021391          190 SAY-NSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIV  234 (313)
Q Consensus       190 ~~~-~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~  234 (313)
                      .+. ++...|+.||++++.+++.++.+.  .|  +++..+.|+.+-
T Consensus       140 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~--~~~~ilR~~~v~  181 (338)
T 1udb_A          140 FPTGTPQSPYGKSKLMVEQILTDLQKAQ--PD--WSIALLRYFNPV  181 (338)
T ss_dssp             SCCCCCSSHHHHHHHHHHHHHHHHHHHS--TT--CEEEEEEECEEE
T ss_pred             cCCCCCCChHHHHHHHHHHHHHHHHHhc--CC--CceEEEeeceec
Confidence            222 235689999999999999998874  24  778788876553

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.80  E-value=6.4e-20  Score=165.46  Aligned_cols=210  Identities=15%  Similarity=0.034  Sum_probs=141.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      ++.+|+||||||+|+||++++++|+++|++|++++|+........+.+.......++.++.+|++               
T Consensus         4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~---------------   68 (321)
T 3vps_A            4 NTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS---------------   68 (321)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT---------------
T ss_pred             ccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc---------------
Confidence            35679999999999999999999999999999999976521000000100001224555555555               


Q ss_pred             CCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCC
Q 021391          106 GRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDK  185 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~  185 (313)
                        ++|+|||+|+.....  ...+.....++ |+.++.++++++...-         ..++|++||...+...+    ...
T Consensus        69 --~~d~vi~~a~~~~~~--~~~~~~~~~~~-n~~~~~~ll~a~~~~~---------v~~~v~~SS~~v~~~~~----~~~  130 (321)
T 3vps_A           69 --DVRLVYHLASHKSVP--RSFKQPLDYLD-NVDSGRHLLALCTSVG---------VPKVVVGSTCEVYGQAD----TLP  130 (321)
T ss_dssp             --TEEEEEECCCCCCHH--HHTTSTTTTHH-HHHHHHHHHHHHHHHT---------CCEEEEEEEGGGGCSCS----SSS
T ss_pred             --cCCEEEECCccCChH--HHHhCHHHHHH-HHHHHHHHHHHHHHcC---------CCeEEEecCHHHhCCCC----CCC
Confidence              799999999975421  12234455667 9999999999885442         35999999977654322    122


Q ss_pred             CCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcE-EEEEeeCcccccCCccccchhHhHHHHHHHh----------
Q 021391          186 INDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNI-TANSLHPGSIVTNLFRYNGILRGFCNTVGKL----------  254 (313)
Q Consensus       186 ~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I-~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~----------  254 (313)
                      +++..+..+...|+.+|.+.+.+++.++.+.   |  + +++.+.|+.+-++......+...+.......          
T Consensus       131 ~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (321)
T 3vps_A          131 TPEDSPLSPRSPYAASKVGLEMVAGAHQRAS---V--APEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGE  205 (321)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHSS---S--SCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSC
T ss_pred             CCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---C--CCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCC
Confidence            3445555667889999999999999988753   5  7 8999999999877655433333333222211          


Q ss_pred             ---hcCChHHHHHHHHHHHccC
Q 021391          255 ---VLKNIPQGAATTCYVALHP  273 (313)
Q Consensus       255 ---~~~~~~eva~~~~~l~~~~  273 (313)
                         ....++|+|+++++++.++
T Consensus       206 ~~~~~v~v~Dva~~~~~~~~~~  227 (321)
T 3vps_A          206 QRRDFTYITDVVDKLVALANRP  227 (321)
T ss_dssp             CEECEEEHHHHHHHHHHGGGSC
T ss_pred             ceEceEEHHHHHHHHHHHHhcC
Confidence               1236899999999999844

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.80  E-value=6.8e-19  Score=175.66  Aligned_cols=194  Identities=19%  Similarity=0.142  Sum_probs=136.0

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      +.+++++|+||||||+|+||++++++|+++|++|++++|+........+.+.... ..++.++.+|+++++++.+++++.
T Consensus         5 ~~~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~v~~v~~Dl~d~~~l~~~~~~~   83 (699)
T 1z45_A            5 LQSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT-KHHIPFYEVDLCDRKGLEKVFKEY   83 (699)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH-TSCCCEEECCTTCHHHHHHHHHHS
T ss_pred             cccccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhcc-CCceEEEEcCCCCHHHHHHHHHhC
Confidence            3456789999999999999999999999999999999997654332223332211 346889999999999998888753


Q ss_pred             hhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          103 NSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                           ++|+||||||.....  ...+.....+++|+.++.++++++...         ..++||++||.+..........
T Consensus        84 -----~~D~Vih~A~~~~~~--~~~~~~~~~~~~Nv~gt~~ll~a~~~~---------~~~~iV~~SS~~vyg~~~~~~~  147 (699)
T 1z45_A           84 -----KIDSVIHFAGLKAVG--ESTQIPLRYYHNNILGTVVLLELMQQY---------NVSKFVFSSSATVYGDATRFPN  147 (699)
T ss_dssp             -----CCCEEEECCSCCCHH--HHHHSHHHHHHHHHHHHHHHHHHHHHH---------TCCEEEEEEEGGGGCCGGGSTT
T ss_pred             -----CCCEEEECCcccCcC--ccccCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEECcHHHhCCCccccc
Confidence                 799999999975321  112334568999999999998766432         1469999999765432110000


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccC
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTN  236 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~  236 (313)
                      ...+++..+..+...|+.+|++++.+++.++.+. ..|  +++..+.|+.+-.+
T Consensus       148 ~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g--~~~~ilR~~~vyG~  198 (699)
T 1z45_A          148 MIPIPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKS--WKFAILRYFNPIGA  198 (699)
T ss_dssp             CCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTS--CEEEEEEECEEECC
T ss_pred             cCCccccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCC--CcEEEEEeccccCC
Confidence            1122333344556789999999999999998775 346  88899998877544

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.80  E-value=3.9e-19  Score=158.18  Aligned_cols=189  Identities=14%  Similarity=0.116  Sum_probs=141.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      +++|||||+|+||++++++|+++|++|++++|.                       .+|++|.+++.+++++.     ++
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~D~~d~~~~~~~~~~~-----~~   57 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK-----------------------LLDITNISQVQQVVQEI-----RP   57 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT-----------------------TSCTTCHHHHHHHHHHH-----CC
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc-----------------------ccCCCCHHHHHHHHHhc-----CC
Confidence            389999999999999999999999999999982                       38999999999999876     79


Q ss_pred             eEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCC
Q 021391          110 NILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDE  189 (313)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~  189 (313)
                      |+|||+||....  ....+.++..+++|+.++.++++++.+.          +.++|++||...+.+..    ...+++.
T Consensus        58 d~vi~~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~v~~SS~~vy~~~~----~~~~~E~  121 (287)
T 3sc6_A           58 HIIIHCAAYTKV--DQAEKERDLAYVINAIGARNVAVASQLV----------GAKLVYISTDYVFQGDR----PEGYDEF  121 (287)
T ss_dssp             SEEEECCCCCCH--HHHTTCHHHHHHHHTHHHHHHHHHHHHH----------TCEEEEEEEGGGSCCCC----SSCBCTT
T ss_pred             CEEEECCcccCh--HHHhcCHHHHHHHHHHHHHHHHHHHHHc----------CCeEEEEchhhhcCCCC----CCCCCCC
Confidence            999999997532  2234678899999999999999998543          34899999987653322    1223444


Q ss_pred             CCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHh-----------hcCC
Q 021391          190 SAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKL-----------VLKN  258 (313)
Q Consensus       190 ~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~-----------~~~~  258 (313)
                      .+..+...|+.+|.+.+.+++.++.         +++.+.|+.+-++....  +...+.......           ....
T Consensus       122 ~~~~p~~~Y~~sK~~~E~~~~~~~~---------~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~  190 (287)
T 3sc6_A          122 HNPAPINIYGASKYAGEQFVKELHN---------KYFIVRTSWLYGKYGNN--FVKTMIRLGKEREEISVVADQIGSPTY  190 (287)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHCS---------SEEEEEECSEECSSSCC--HHHHHHHHHTTCSEEEEECSCEECCEE
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHhCC---------CcEEEeeeeecCCCCCc--HHHHHHHHHHcCCCeEeecCcccCceE
Confidence            5556678899999999998887643         23678898887764332  222222222111           1234


Q ss_pred             hHHHHHHHHHHHccC
Q 021391          259 IPQGAATTCYVALHP  273 (313)
Q Consensus       259 ~~eva~~~~~l~~~~  273 (313)
                      ++|+|+++++++.++
T Consensus       191 v~Dva~~~~~~~~~~  205 (287)
T 3sc6_A          191 VADLNVMINKLIHTS  205 (287)
T ss_dssp             HHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHhCC
Confidence            899999999999844

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.79  E-value=5.8e-19  Score=158.48  Aligned_cols=209  Identities=12%  Similarity=0.058  Sum_probs=146.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC-CEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           31 TAIVTGASSGIGTETARVLALRG-VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      ++|||||+|+||++++++|+++| ++|++++|+.....  ...+.    +  +. +.+|+++.++++.+++..  .++++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~----~--~~-~~~d~~~~~~~~~~~~~~--~~~~~   69 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV----D--LN-IADYMDKEDFLIQIMAGE--EFGDV   69 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHH----T--SC-CSEEEEHHHHHHHHHTTC--CCSSC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcC----c--ce-eccccccHHHHHHHHhcc--ccCCC
Confidence            48999999999999999999999 89999999765421  11111    1  22 678999988877766521  12369


Q ss_pred             eEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCC
Q 021391          110 NILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDE  189 (313)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~  189 (313)
                      |+|||+||....    ..++++..+++|+.++.++++++.+.        + . ++|++||.+.....+.    ..+++.
T Consensus        70 d~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~a~~~~--------~-~-~~v~~SS~~v~g~~~~----~~~~E~  131 (310)
T 1eq2_A           70 EAIFHEGACSST----TEWDGKYMMDNNYQYSKELLHYCLER--------E-I-PFLYASSAATYGGRTS----DFIESR  131 (310)
T ss_dssp             CEEEECCSCCCT----TCCCHHHHHHHTHHHHHHHHHHHHHH--------T-C-CEEEEEEGGGGTTCCS----CBCSSG
T ss_pred             cEEEECcccccC----cccCHHHHHHHHHHHHHHHHHHHHHc--------C-C-eEEEEeeHHHhCCCCC----CCCCCC
Confidence            999999997543    44677889999999999999988643        1 3 9999999865433221    123334


Q ss_pred             CCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccc----cchhHhHHHHH---------H----
Q 021391          190 SAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY----NGILRGFCNTV---------G----  252 (313)
Q Consensus       190 ~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~----~~~~~~~~~~~---------~----  252 (313)
                      .+..+...|+.+|.+.+.+++.++.+   .|  ++++.+.||.+-++....    ..+...+....         .    
T Consensus       132 ~~~~p~~~Y~~sK~~~e~~~~~~~~~---~g--~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  206 (310)
T 1eq2_A          132 EYEKPLNVYGYSKFLFDEYVRQILPE---AN--SQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSEN  206 (310)
T ss_dssp             GGCCCSSHHHHHHHHHHHHHHHHGGG---CS--SCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC------------
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHH---cC--CCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCc
Confidence            44456678999999999999988754   35  899999999998776431    11111111110         0    


Q ss_pred             -HhhcCChHHHHHHHHHHHccC
Q 021391          253 -KLVLKNIPQGAATTCYVALHP  273 (313)
Q Consensus       253 -~~~~~~~~eva~~~~~l~~~~  273 (313)
                       ......++|+|++++.++.++
T Consensus       207 ~~~~~i~v~Dva~~~~~~~~~~  228 (310)
T 1eq2_A          207 FKRDFVYVGDVADVNLWFLENG  228 (310)
T ss_dssp             -CBCEEEHHHHHHHHHHHHHHC
T ss_pred             ceEccEEHHHHHHHHHHHHhcC
Confidence             112356889999999999744

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.79  E-value=1.6e-18  Score=156.62  Aligned_cols=200  Identities=12%  Similarity=0.125  Sum_probs=144.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      ++|++|||||+|+||++++++|+++|++|++++|+.                      .+|++|.+++.+++++.     
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~----------------------~~D~~d~~~~~~~~~~~-----   54 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSRAVHDFFASE-----   54 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHHHHHHHHHHH-----
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc----------------------cCCccCHHHHHHHHHhc-----
Confidence            468999999999999999999999999999988762                      27999999999888865     


Q ss_pred             CeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCC
Q 021391          108 PLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIN  187 (313)
Q Consensus       108 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  187 (313)
                      ++|+|||+||.... .....++.+..+++|+.++.++++++...         ...++|++||...+.... .   ..++
T Consensus        55 ~~d~vih~a~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~SS~~vyg~~~-~---~~~~  120 (321)
T 1e6u_A           55 RIDQVYLAAAKVGG-IVANNTYPADFIYQNMMIESNIIHAAHQN---------DVNKLLFLGSSCIYPKLA-K---QPMA  120 (321)
T ss_dssp             CCSEEEECCCCCCC-HHHHHHCHHHHHHHHHHHHHHHHHHHHHT---------TCCEEEEECCGGGSCTTC-C---SSBC
T ss_pred             CCCEEEEcCeecCC-cchhhhCHHHHHHHHHHHHHHHHHHHHHh---------CCCeEEEEccHHHcCCCC-C---CCcC
Confidence            79999999996531 11234566788999999999999988542         135999999987653221 1   1112


Q ss_pred             CCC----CCCc-cccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----chhHhHHHHHHH-----
Q 021391          188 DES----AYNS-FGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----GILRGFCNTVGK-----  253 (313)
Q Consensus       188 ~~~----~~~~-~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~~-----  253 (313)
                      +..    ...+ ...|+.+|.+.+.+++.++.+.   |  ++++.+.||.+-.+.....    .+...+......     
T Consensus       121 E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g  195 (321)
T 1e6u_A          121 ESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY---G--RDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQK  195 (321)
T ss_dssp             GGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHT
T ss_pred             ccccccCCCCCCCCccHHHHHHHHHHHHHHHHHh---C--CCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcC
Confidence            221    2223 3589999999999999988765   5  8999999999987754321    222222222111     


Q ss_pred             --h-----------hcCChHHHHHHHHHHHccC
Q 021391          254 --L-----------VLKNIPQGAATTCYVALHP  273 (313)
Q Consensus       254 --~-----------~~~~~~eva~~~~~l~~~~  273 (313)
                        .           .+..++|+|++++.++.++
T Consensus       196 ~~~~~~~~~g~~~~~~i~v~Dva~~~~~~~~~~  228 (321)
T 1e6u_A          196 APDVVVWGSGTPMREFLHVDDMAAASIHVMELA  228 (321)
T ss_dssp             CSEEEEESCSCCEECEEEHHHHHHHHHHHHHSC
T ss_pred             CCceEEcCCCCEEEEeEEHHHHHHHHHHHHhCc
Confidence              0           1236899999999999744

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.79  E-value=1.3e-18  Score=156.16  Aligned_cols=217  Identities=14%  Similarity=0.061  Sum_probs=147.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      +++++|+||||||+|+||++++++|+++|+      +..             .....+..+.+|++|.+++.++++..  
T Consensus         2 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~-------------~~~~~~~~~~~D~~d~~~~~~~~~~~--   60 (319)
T 4b8w_A            2 LYFQSMRILVTGGSGLVGKAIQKVVADGAG------LPG-------------EDWVFVSSKDADLTDTAQTRALFEKV--   60 (319)
T ss_dssp             CCCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTT-------------CEEEECCTTTCCTTSHHHHHHHHHHS--
T ss_pred             ccccCCeEEEECCCcHHHHHHHHHHHhcCC------ccc-------------ccccccCceecccCCHHHHHHHHhhc--
Confidence            457889999999999999999999999997      110             00123445578999999999888863  


Q ss_pred             cCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCC
Q 021391          105 QGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFD  184 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  184 (313)
                         ++|+|||+|+.... .....+.....+++|+.++.++++++...         ...++|++||.+.+.. +...   
T Consensus        61 ---~~d~Vih~A~~~~~-~~~~~~~~~~~~~~nv~gt~~ll~a~~~~---------~~~~~v~~SS~~vyg~-~~~~---  123 (319)
T 4b8w_A           61 ---QPTHVIHLAAMVGG-LFRNIKYNLDFWRKNVHMNDNVLHSAFEV---------GARKVVSCLSTCIFPD-KTTY---  123 (319)
T ss_dssp             ---CCSEEEECCCCCCC-HHHHTTCHHHHHHHHHHHHHHHHHHHHHT---------TCSEEEEECCGGGSCS-SCCS---
T ss_pred             ---CCCEEEECceeccc-ccccccCHHHHHHHHHHHHHHHHHHHHHc---------CCCeEEEEcchhhcCC-CCCC---
Confidence               69999999997431 12344567788999999999999887532         1358999999865432 2111   


Q ss_pred             CCCCCC----CCCcc-ccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----chhHhHHHH----H
Q 021391          185 KINDES----AYNSF-GAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----GILRGFCNT----V  251 (313)
Q Consensus       185 ~~~~~~----~~~~~-~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----~~~~~~~~~----~  251 (313)
                      .+++..    ...+. ..|+.+|.+.+.+++.++.+.   |  ++++.+.|+.+-.+.....    .+...+...    .
T Consensus       124 ~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~  198 (319)
T 4b8w_A          124 PIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQY---G--CTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAK  198 (319)
T ss_dssp             SBCGGGGGBSCCCSSSHHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHH
T ss_pred             CccccccccCCCCCCcchHHHHHHHHHHHHHHHHHhh---C--CCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHh
Confidence            122221    22222 369999999999999988765   4  8999999999977654321    122222222    1


Q ss_pred             HHh-------------hcCChHHHHHHHHHHHccCCccCCCceeecCC
Q 021391          252 GKL-------------VLKNIPQGAATTCYVALHPQVQGVSGEYFSDS  286 (313)
Q Consensus       252 ~~~-------------~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~  286 (313)
                      ...             .+..++|+|++++.++.++..  ..|..+...
T Consensus       199 ~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~--~~~~~~ni~  244 (319)
T 4b8w_A          199 SSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLREYNE--VEPIILSVG  244 (319)
T ss_dssp             HHTCCEEEESCSCCEECEEEHHHHHHHHHHHHHHCCC--SSCEEECCC
T ss_pred             ccCCceEEeCCCCeeEEEEeHHHHHHHHHHHHhcccc--CCceEEEec
Confidence            111             124689999999999974322  334454443

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.77  E-value=1.2e-18  Score=155.93  Aligned_cols=191  Identities=15%  Similarity=0.075  Sum_probs=140.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      +++|||||+|+||++++++|+ +|++|++++|+..                   ++.+|++|.+++.++++..     ++
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-------------------~~~~D~~d~~~~~~~~~~~-----~~   55 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-------------------EFCGDFSNPKGVAETVRKL-----RP   55 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-------------------SSCCCTTCHHHHHHHHHHH-----CC
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-------------------cccccCCCHHHHHHHHHhc-----CC
Confidence            379999999999999999999 8999999998751                   3578999999999888865     69


Q ss_pred             eEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCC
Q 021391          110 NILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDE  189 (313)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~  189 (313)
                      |+|||+||....  ....++++..+++|+.++.++++++...          +.++|++||...+.+.+.    ..+++.
T Consensus        56 d~vih~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~~----------~~~~v~~SS~~vy~~~~~----~~~~E~  119 (299)
T 1n2s_A           56 DVIVNAAAHTAV--DKAESEPELAQLLNATSVEAIAKAANET----------GAWVVHYSTDYVFPGTGD----IPWQET  119 (299)
T ss_dssp             SEEEECCCCCCH--HHHTTCHHHHHHHHTHHHHHHHHHHTTT----------TCEEEEEEEGGGSCCCTT----CCBCTT
T ss_pred             CEEEECcccCCH--hhhhcCHHHHHHHHHHHHHHHHHHHHHc----------CCcEEEEecccEEeCCCC----CCCCCC
Confidence            999999996432  2234677888999999999999988421          348999999876543221    123334


Q ss_pred             CCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHh----h-------cCC
Q 021391          190 SAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKL----V-------LKN  258 (313)
Q Consensus       190 ~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~----~-------~~~  258 (313)
                      .+..+...|+.+|.+.+.+++.++.         +++.+.||.+-++...  .+...+.......    .       ...
T Consensus       120 ~~~~p~~~Y~~sK~~~E~~~~~~~~---------~~~ilRp~~v~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~  188 (299)
T 1n2s_A          120 DATSPLNVYGKTKLAGEKALQDNCP---------KHLIFRTSWVYAGKGN--NFAKTMLRLAKERQTLSVINDQYGAPTG  188 (299)
T ss_dssp             SCCCCSSHHHHHHHHHHHHHHHHCS---------SEEEEEECSEECSSSC--CHHHHHHHHHHHCSEEEEECSCEECCEE
T ss_pred             CCCCCccHHHHHHHHHHHHHHHhCC---------CeEEEeeeeecCCCcC--cHHHHHHHHHhcCCCEEeecCcccCCee
Confidence            4455667899999999998887642         4678999999877543  2233222222111    1       123


Q ss_pred             hHHHHHHHHHHHcc
Q 021391          259 IPQGAATTCYVALH  272 (313)
Q Consensus       259 ~~eva~~~~~l~~~  272 (313)
                      ++|+|++++.++.+
T Consensus       189 v~Dva~~~~~~~~~  202 (299)
T 1n2s_A          189 AELLADCTAHAIRV  202 (299)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            89999999999974

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.76  E-value=7.7e-18  Score=162.06  Aligned_cols=223  Identities=12%  Similarity=0.068  Sum_probs=148.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchh---HHHHHHHHHHh-------CCCCceEEEEccCCCHHHHHHH
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAA---GKDVREAIVKE-------IPSAKVDAMELDVSSLASVRKF   98 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~---~~~~~~~l~~~-------~~~~~~~~~~~D~s~~~~v~~~   98 (313)
                      .|+||||||||+||++++++|.++|++|++++|+...   .+...+.+...       ....++.++.+|+++++++.  
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~--  227 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV--  227 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC--
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC--
Confidence            4899999999999999999999999999999998763   22333322211       11457999999999987765  


Q ss_pred             HHHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccccc
Q 021391           99 ASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYS  178 (313)
Q Consensus        99 ~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~  178 (313)
                            ...++|+|||||+...     ....++..+++|+.++.++++.+.+   .       ..++|++||... ....
T Consensus       228 ------~~~~~D~Vih~Aa~~~-----~~~~~~~~~~~Nv~gt~~ll~~a~~---~-------~~~~v~iSS~~v-G~~~  285 (508)
T 4f6l_B          228 ------LPENMDTIIHAGARTD-----HFGDDDEFEKVNVQGTVDVIRLAQQ---H-------HARLIYVSTISV-GTYF  285 (508)
T ss_dssp             ------CSSCCSEEEECCCC-------------CCHHHHHHHHHHHHHHHHT---T-------TCEEEEEEESCT-TSEE
T ss_pred             ------CccCCCEEEECCceec-----CCCCHHHHhhhHHHHHHHHHHHHHh---C-------CCcEEEeCChhh-ccCC
Confidence                  3458999999999753     2345678899999999999998865   2       469999999876 2111


Q ss_pred             CC-CCCCCCCCCCC---CCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-------chhHhH
Q 021391          179 EG-IRFDKINDESA---YNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-------GILRGF  247 (313)
Q Consensus       179 ~~-~~~~~~~~~~~---~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-------~~~~~~  247 (313)
                      .. .....+.+...   ..+...|+.+|.+.+.+++.++.    .|  ++++.+.||.+-++.....       .....+
T Consensus       286 ~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g--i~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~  359 (508)
T 4f6l_B          286 DIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NG--LDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMV  359 (508)
T ss_dssp             CTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TT--CEEEEEEECCEESCSSSCCCCTTCTTCHHHHH
T ss_pred             ccCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cC--CCEEEEecceeccCCCCCcccCCcchHHHHHH
Confidence            00 00011111111   22567899999999998887653    57  9999999999977654332       112222


Q ss_pred             HHHHHHh------------hcCChHHHHHHHHHHHccCCccCCCceeecC
Q 021391          248 CNTVGKL------------VLKNIPQGAATTCYVALHPQVQGVSGEYFSD  285 (313)
Q Consensus       248 ~~~~~~~------------~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~  285 (313)
                      .......            .+..++++|+++++++.++.    .|..+..
T Consensus       360 i~~~~~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~----~~~~~nl  405 (508)
T 4f6l_B          360 MNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT----PQIIYHV  405 (508)
T ss_dssp             HHHHTTCSEEETTGGGSEEECEEHHHHHHHHHHHTTBCC----SCSEEEE
T ss_pred             HHHHHHcCCCCCCccCceEEEEcHHHHHHHHHHHHhCCC----CCCEEEe
Confidence            2222111            13457999999999997443    4454443

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.75  E-value=7.9e-18  Score=149.61  Aligned_cols=191  Identities=16%  Similarity=0.097  Sum_probs=137.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc--CCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           30 LTAIVTGASSGIGTETARVLALR--GVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~--G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      |++|||||+|+||++++++|+++  |++|++++|+.++.+...    .    .++.++.+|++|++++.++++       
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~----~----~~~~~~~~D~~d~~~l~~~~~-------   65 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----D----QGVEVRHGDYNQPESLQKAFA-------   65 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH----H----TTCEEEECCTTCHHHHHHHTT-------
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh----h----cCCeEEEeccCCHHHHHHHHh-------
Confidence            57999999999999999999999  999999999877654332    1    257889999999998877765       


Q ss_pred             CeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCC
Q 021391          108 PLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIN  187 (313)
Q Consensus       108 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  187 (313)
                      ++|+|||+++...       +.     ++|+.+..++++++...         ..+++|++||.... .           
T Consensus        66 ~~d~vi~~a~~~~-------~~-----~~n~~~~~~l~~a~~~~---------~~~~~v~~Ss~~~~-~-----------  112 (287)
T 2jl1_A           66 GVSKLLFISGPHY-------DN-----TLLIVQHANVVKAARDA---------GVKHIAYTGYAFAE-E-----------  112 (287)
T ss_dssp             TCSEEEECCCCCS-------CH-----HHHHHHHHHHHHHHHHT---------TCSEEEEEEETTGG-G-----------
T ss_pred             cCCEEEEcCCCCc-------Cc-----hHHHHHHHHHHHHHHHc---------CCCEEEEECCCCCC-C-----------
Confidence            5899999998521       11     57888888888877431         24599999997653 1           


Q ss_pred             CCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHH--------HHhhcCCh
Q 021391          188 DESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTV--------GKLVLKNI  259 (313)
Q Consensus       188 ~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~--------~~~~~~~~  259 (313)
                            ....|+.+|.+.+.+++.       .|  ++++.+.||.+.++....  +.......-        .......+
T Consensus       113 ------~~~~y~~~K~~~E~~~~~-------~~--~~~~ilrp~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~  175 (287)
T 2jl1_A          113 ------SIIPLAHVHLATEYAIRT-------TN--IPYTFLRNALYTDFFVNE--GLRASTESGAIVTNAGSGIVNSVTR  175 (287)
T ss_dssp             ------CCSTHHHHHHHHHHHHHH-------TT--CCEEEEEECCBHHHHSSG--GGHHHHHHTEEEESCTTCCBCCBCH
T ss_pred             ------CCCchHHHHHHHHHHHHH-------cC--CCeEEEECCEeccccchh--hHHHHhhCCceeccCCCCccCccCH
Confidence                  123799999999988753       46  889999999886654111  111111110        01134689


Q ss_pred             HHHHHHHHHHHccCCccCCCceeecCCcc
Q 021391          260 PQGAATTCYVALHPQVQGVSGEYFSDSNI  288 (313)
Q Consensus       260 ~eva~~~~~l~~~~~~~~~tG~~~~~~~~  288 (313)
                      +|+|++++.++.++.   .+|+.+...+.
T Consensus       176 ~Dva~~~~~~~~~~~---~~g~~~~i~~~  201 (287)
T 2jl1_A          176 NELALAAATVLTEEG---HENKTYNLVSN  201 (287)
T ss_dssp             HHHHHHHHHHHTSSS---CTTEEEEECCS
T ss_pred             HHHHHHHHHHhcCCC---CCCcEEEecCC
Confidence            999999999997432   35766665443

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.73  E-value=2.5e-18  Score=153.02  Aligned_cols=206  Identities=15%  Similarity=0.040  Sum_probs=140.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      |++|++|||| +|+||++++++|+++|++|++++|+.+..            ..++.++.+|++|.+++.++++      
T Consensus         1 M~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~------------~~~~~~~~~Dl~d~~~~~~~~~------   61 (286)
T 3gpi_A            1 MSLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM------------PAGVQTLIADVTRPDTLASIVH------   61 (286)
T ss_dssp             -CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC------------CTTCCEEECCTTCGGGCTTGGG------
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccCCceEEccCCChHHHHHhhc------
Confidence            3568999999 59999999999999999999999986541            3468899999999998777665      


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                      +++|+|||+||..       ....+..+++|+.++.++++++.    +     ...+++|++||...+...+ .   ..+
T Consensus        62 ~~~d~vih~a~~~-------~~~~~~~~~~n~~~~~~ll~a~~----~-----~~~~~~v~~SS~~vyg~~~-~---~~~  121 (286)
T 3gpi_A           62 LRPEILVYCVAAS-------EYSDEHYRLSYVEGLRNTLSALE----G-----APLQHVFFVSSTGVYGQEV-E---EWL  121 (286)
T ss_dssp             GCCSEEEECHHHH-------HHC-----CCSHHHHHHHHHHTT----T-----SCCCEEEEEEEGGGCCCCC-S---SEE
T ss_pred             CCCCEEEEeCCCC-------CCCHHHHHHHHHHHHHHHHHHHh----h-----CCCCEEEEEcccEEEcCCC-C---CCC
Confidence            3699999999852       24567778999999999998885    2     2246999999976543221 1   123


Q ss_pred             CCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHH------HHhhcCChH
Q 021391          187 NDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTV------GKLVLKNIP  260 (313)
Q Consensus       187 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~------~~~~~~~~~  260 (313)
                      ++..+..+...|+.+|.+.+.+ +..          ++++.+.|+.+-.+....  +...+....      .......++
T Consensus       122 ~E~~~~~p~~~Y~~sK~~~E~~-~~~----------~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~i~v~  188 (286)
T 3gpi_A          122 DEDTPPIAKDFSGKRMLEAEAL-LAA----------YSSTILRFSGIYGPGRLR--MIRQAQTPEQWPARNAWTNRIHRD  188 (286)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHH-GGG----------SSEEEEEECEEEBTTBCH--HHHHTTCGGGSCSSBCEECEEEHH
T ss_pred             CCCCCCCCCChhhHHHHHHHHH-Hhc----------CCeEEEecccccCCCchh--HHHHHHhcccCCCcCceeEEEEHH
Confidence            3444555677899999998887 442          456789999987765431  111111100      001235689


Q ss_pred             HHHHHHHHHHccCCccCCCceeecC
Q 021391          261 QGAATTCYVALHPQVQGVSGEYFSD  285 (313)
Q Consensus       261 eva~~~~~l~~~~~~~~~tG~~~~~  285 (313)
                      |+|+++++++.++. ....|..+..
T Consensus       189 Dva~~~~~~~~~~~-~~~~~~~~~~  212 (286)
T 3gpi_A          189 DGAAFIAYLIQQRS-HAVPERLYIV  212 (286)
T ss_dssp             HHHHHHHHHHHHHT-TSCCCSEEEE
T ss_pred             HHHHHHHHHHhhhc-cCCCCceEEE
Confidence            99999999998532 1233444443

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.72  E-value=2.1e-17  Score=146.61  Aligned_cols=187  Identities=14%  Similarity=0.081  Sum_probs=128.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc--CCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           31 TAIVTGASSGIGTETARVLALR--GVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~--G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      ++|||||+|+||++++++|+++  |++|++++|+.++.+...    .    .++.++.+|++|++++.++++       +
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~----~----~~~~~~~~D~~d~~~~~~~~~-------~   65 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA----A----QGITVRQADYGDEAALTSALQ-------G   65 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH----H----TTCEEEECCTTCHHHHHHHTT-------T
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh----c----CCCeEEEcCCCCHHHHHHHHh-------C
Confidence            4899999999999999999999  999999999877654332    1    257889999999998877765       6


Q ss_pred             eeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCC
Q 021391          109 LNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIND  188 (313)
Q Consensus       109 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~  188 (313)
                      +|+|||++|...              ..|+.+..++++++.    +.     ..+++|++||.... .            
T Consensus        66 ~d~vi~~a~~~~--------------~~~~~~~~~l~~a~~----~~-----~~~~~v~~Ss~~~~-~------------  109 (286)
T 2zcu_A           66 VEKLLLISSSEV--------------GQRAPQHRNVINAAK----AA-----GVKFIAYTSLLHAD-T------------  109 (286)
T ss_dssp             CSEEEECC----------------------CHHHHHHHHHH----HH-----TCCEEEEEEETTTT-T------------
T ss_pred             CCEEEEeCCCCc--------------hHHHHHHHHHHHHHH----Hc-----CCCEEEEECCCCCC-C------------
Confidence            899999998521              135666666666554    32     14699999997654 1            


Q ss_pred             CCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHH----H----HHhhcCChH
Q 021391          189 ESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNT----V----GKLVLKNIP  260 (313)
Q Consensus       189 ~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~----~----~~~~~~~~~  260 (313)
                           ....|+.+|.+.+.+++.       .|  ++++.+.||.+.++...   +.......    .    .......++
T Consensus       110 -----~~~~y~~sK~~~e~~~~~-------~~--~~~~ilrp~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~  172 (286)
T 2zcu_A          110 -----SPLGLADEHIETEKMLAD-------SG--IVYTLLRNGWYSENYLA---SAPAALEHGVFIGAAGDGKIASATRA  172 (286)
T ss_dssp             -----CCSTTHHHHHHHHHHHHH-------HC--SEEEEEEECCBHHHHHT---THHHHHHHTEEEESCTTCCBCCBCHH
T ss_pred             -----CcchhHHHHHHHHHHHHH-------cC--CCeEEEeChHHhhhhHH---HhHHhhcCCceeccCCCCccccccHH
Confidence                 123799999999988764       36  89999999988665321   11111110    0    112246899


Q ss_pred             HHHHHHHHHHccCCccCCCceeecCCcc
Q 021391          261 QGAATTCYVALHPQVQGVSGEYFSDSNI  288 (313)
Q Consensus       261 eva~~~~~l~~~~~~~~~tG~~~~~~~~  288 (313)
                      |+|+++++++.++.   .+|+.+...+.
T Consensus       173 Dva~~~~~~~~~~~---~~g~~~~i~~~  197 (286)
T 2zcu_A          173 DYAAAAARVISEAG---HEGKVYELAGD  197 (286)
T ss_dssp             HHHHHHHHHHHSSS---CTTCEEEECCS
T ss_pred             HHHHHHHHHhcCCC---CCCceEEEeCC
Confidence            99999999997432   35666655443

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.69  E-value=5.3e-17  Score=145.36  Aligned_cols=203  Identities=14%  Similarity=0.035  Sum_probs=132.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcC-CEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRG-VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      +|++|||||+|+||++++++|+++| ++|++++|+.++...  +.+..    .++.++.+|++|++++.++++       
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~----~~~~~~~~D~~d~~~l~~~~~-------   71 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL----QGAEVVQGDQDDQVIMELALN-------   71 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH----TTCEEEECCTTCHHHHHHHHT-------
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH----CCCEEEEecCCCHHHHHHHHh-------
Confidence            5899999999999999999999999 999999998765431  22222    257889999999999888776       


Q ss_pred             CeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCC
Q 021391          108 PLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIN  187 (313)
Q Consensus       108 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  187 (313)
                      ++|+||||+|.....          ..+.|+.+..+++    +.+.+.     ..++||++|+. +..+.+..       
T Consensus        72 ~~d~vi~~a~~~~~~----------~~~~~~~~~~~~~----~aa~~~-----gv~~iv~~S~~-~~~~~~~~-------  124 (299)
T 2wm3_A           72 GAYATFIVTNYWESC----------SQEQEVKQGKLLA----DLARRL-----GLHYVVYSGLE-NIKKLTAG-------  124 (299)
T ss_dssp             TCSEEEECCCHHHHT----------CHHHHHHHHHHHH----HHHHHH-----TCSEEEECCCC-CHHHHTTT-------
T ss_pred             cCCEEEEeCCCCccc----------cchHHHHHHHHHH----HHHHHc-----CCCEEEEEcCc-cccccCCC-------
Confidence            689999999843110          1234544444444    444442     24688985553 33222110       


Q ss_pred             CCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-c--hhHh------HHHHHHHhhcCC
Q 021391          188 DESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-G--ILRG------FCNTVGKLVLKN  258 (313)
Q Consensus       188 ~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-~--~~~~------~~~~~~~~~~~~  258 (313)
                           .....|..+|.+++.+++.       .|  ++++.+.||.+.++..... .  ....      ....-.......
T Consensus       125 -----~~~~~y~~sK~~~e~~~~~-------~g--i~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~  190 (299)
T 2wm3_A          125 -----RLAAAHFDGKGEVEEYFRD-------IG--VPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMS  190 (299)
T ss_dssp             -----SCCCHHHHHHHHHHHHHHH-------HT--CCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEEC
T ss_pred             -----cccCchhhHHHHHHHHHHH-------CC--CCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecCCCCccceec
Confidence                 0235799999999988764       36  8999999999877653311 0  0000      000001112468


Q ss_pred             hHHHHHHHHHHHccCCccCCCceeecCCc
Q 021391          259 IPQGAATTCYVALHPQVQGVSGEYFSDSN  287 (313)
Q Consensus       259 ~~eva~~~~~l~~~~~~~~~tG~~~~~~~  287 (313)
                      ++|+|+.++.++.++. . ..|+.+...+
T Consensus       191 ~~Dva~~~~~~l~~~~-~-~~g~~~~~~g  217 (299)
T 2wm3_A          191 VSDLGPVVLSLLKMPE-K-YVGQNIGLST  217 (299)
T ss_dssp             GGGHHHHHHHHHHSHH-H-HTTCEEECCS
T ss_pred             HHHHHHHHHHHHcChh-h-hCCeEEEeee
Confidence            8999999999997431 1 2456555544

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.67  E-value=4.7e-16  Score=138.39  Aligned_cols=189  Identities=17%  Similarity=0.123  Sum_probs=124.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc-CCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           30 LTAIVTGASSGIGTETARVLALR-GVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      ++||||||||+||++++++|+++ |++|++++|+.++.....        ..++.++.+|++|++++.++++       +
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~--------~~~v~~~~~D~~d~~~l~~~~~-------~   65 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW--------RGKVSVRQLDYFNQESMVEAFK-------G   65 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG--------BTTBEEEECCTTCHHHHHHHTT-------T
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh--------hCCCEEEEcCCCCHHHHHHHHh-------C
Confidence            36999999999999999999998 999999999987644321        3478999999999998877765       7


Q ss_pred             eeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCC
Q 021391          109 LNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIND  188 (313)
Q Consensus       109 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~  188 (313)
                      +|+||||+|....            ...|+.+..++    ++.+.+     ..-++||++||......            
T Consensus        66 ~d~vi~~a~~~~~------------~~~~~~~~~~l----~~aa~~-----~gv~~iv~~Ss~~~~~~------------  112 (289)
T 3e48_A           66 MDTVVFIPSIIHP------------SFKRIPEVENL----VYAAKQ-----SGVAHIIFIGYYADQHN------------  112 (289)
T ss_dssp             CSEEEECCCCCCS------------HHHHHHHHHHH----HHHHHH-----TTCCEEEEEEESCCSTT------------
T ss_pred             CCEEEEeCCCCcc------------chhhHHHHHHH----HHHHHH-----cCCCEEEEEcccCCCCC------------
Confidence            8999999986422            12245554444    444444     22469999998543211            


Q ss_pred             CCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHH--------HhhcCChH
Q 021391          189 ESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVG--------KLVLKNIP  260 (313)
Q Consensus       189 ~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~--------~~~~~~~~  260 (313)
                             ..|..++..     ..+...+...|  ++++.+.||.+.+++..   +.........        ......++
T Consensus       113 -------~~~~~~~~~-----~~~e~~~~~~g--~~~~ilrp~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~i~~~  175 (289)
T 3e48_A          113 -------NPFHMSPYF-----GYASRLLSTSG--IDYTYVRMAMYMDPLKP---YLPELMNMHKLIYPAGDGRINYITRN  175 (289)
T ss_dssp             -------CCSTTHHHH-----HHHHHHHHHHC--CEEEEEEECEESTTHHH---HHHHHHHHTEECCCCTTCEEEEECHH
T ss_pred             -------CCCccchhH-----HHHHHHHHHcC--CCEEEEeccccccccHH---HHHHHHHCCCEecCCCCceeeeEEHH
Confidence                   123333321     12333444567  99999999999876432   1111111100        01145789


Q ss_pred             HHHHHHHHHHccCCccCCCceeecCC
Q 021391          261 QGAATTCYVALHPQVQGVSGEYFSDS  286 (313)
Q Consensus       261 eva~~~~~l~~~~~~~~~tG~~~~~~  286 (313)
                      |+|+++++++.++. ..  |+.+...
T Consensus       176 Dva~~~~~~l~~~~-~~--g~~~~~~  198 (289)
T 3e48_A          176 DIARGVIAIIKNPD-TW--GKRYLLS  198 (289)
T ss_dssp             HHHHHHHHHHHCGG-GT--TCEEEEC
T ss_pred             HHHHHHHHHHcCCC-cC--CceEEeC
Confidence            99999999998543 22  6555544

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.67  E-value=7.4e-16  Score=142.07  Aligned_cols=173  Identities=16%  Similarity=0.149  Sum_probs=129.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           30 LTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      ++||||||+|+||++++++|+++|+ +|+.++|+                           +|++++.++++       +
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~---------------------------~d~~~l~~~~~-------~   46 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ---------------------------TKEEELESALL-------K   46 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT---------------------------CCHHHHHHHHH-------H
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC---------------------------CCHHHHHHHhc-------c
Confidence            4799999999999999999999998 77776664                           67888888777       4


Q ss_pred             eeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCC
Q 021391          109 LNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIND  188 (313)
Q Consensus       109 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~  188 (313)
                      +|+|||+||....      +..+..+++|+.++.++++++...        +.+.++|++||.....             
T Consensus        47 ~d~Vih~a~~~~~------~~~~~~~~~n~~~~~~l~~a~~~~--------~~~~~~v~~Ss~~~~~-------------   99 (369)
T 3st7_A           47 ADFIVHLAGVNRP------EHDKEFSLGNVSYLDHVLDILTRN--------TKKPAILLSSSIQATQ-------------   99 (369)
T ss_dssp             CSEEEECCCSBCT------TCSTTCSSSCCBHHHHHHHHHTTC--------SSCCEEEEEEEGGGGS-------------
T ss_pred             CCEEEECCcCCCC------CCHHHHHHHHHHHHHHHHHHHHHh--------CCCCeEEEeCchhhcC-------------
Confidence            8999999996532      456677889999999999887421        1224899999987652             


Q ss_pred             CCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--chhHhHHHHHHHh------------
Q 021391          189 ESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--GILRGFCNTVGKL------------  254 (313)
Q Consensus       189 ~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--~~~~~~~~~~~~~------------  254 (313)
                            ...|+.+|.+.+.+++.++.+.   |  +++..+.|+.+-.+.....  .+...+.......            
T Consensus       100 ------~~~Y~~sK~~~E~~~~~~~~~~---g--~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (369)
T 3st7_A          100 ------DNPYGESKLQGEQLLREYAEEY---G--NTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVEL  168 (369)
T ss_dssp             ------CSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEE
T ss_pred             ------CCCchHHHHHHHHHHHHHHHHh---C--CCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEE
Confidence                  3579999999999999988775   4  7888999999877654321  2233333222211            


Q ss_pred             hcCChHHHHHHHHHHHccCC
Q 021391          255 VLKNIPQGAATTCYVALHPQ  274 (313)
Q Consensus       255 ~~~~~~eva~~~~~l~~~~~  274 (313)
                      .+..++|+|++++.++.++.
T Consensus       169 ~~i~v~Dva~~~~~~l~~~~  188 (369)
T 3st7_A          169 TLNYVDDIVAEIKRAIEGTP  188 (369)
T ss_dssp             EEEEHHHHHHHHHHHHHTCC
T ss_pred             EEEEHHHHHHHHHHHHhCCc
Confidence            13458899999999998543

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.66  E-value=6.1e-16  Score=142.07  Aligned_cols=189  Identities=15%  Similarity=0.086  Sum_probs=126.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEcc-CCCHHHHHHHHHHHhh
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD-VSSLASVRKFASEYNS  104 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D-~s~~~~v~~~~~~~~~  104 (313)
                      ++++|+++||||||+||++++++|+++|++|++++|+.+...  .+.+..   ..++.++.+| ++|++++.++++    
T Consensus         2 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~---~~~v~~v~~D~l~d~~~l~~~~~----   72 (352)
T 1xgk_A            2 AQQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA---IPNVTLFQGPLLNNVPLMDTLFE----   72 (352)
T ss_dssp             -CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT---STTEEEEESCCTTCHHHHHHHHT----
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh---cCCcEEEECCccCCHHHHHHHHh----
Confidence            345789999999999999999999999999999999876642  122221   2368889999 999999888765    


Q ss_pred             cCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc-cccccCCCCC
Q 021391          105 QGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH-RFAYSEGIRF  183 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~-~~~~~~~~~~  183 (313)
                         ++|++|||++...             .+.|..+ .+++    +.+.+.    ++.+++|++||... ..+.+     
T Consensus        73 ---~~d~Vi~~a~~~~-------------~~~~~~~-~~l~----~aa~~~----g~v~~~V~~SS~~~~~~~~~-----  122 (352)
T 1xgk_A           73 ---GAHLAFINTTSQA-------------GDEIAIG-KDLA----DAAKRA----GTIQHYIYSSMPDHSLYGPW-----  122 (352)
T ss_dssp             ---TCSEEEECCCSTT-------------SCHHHHH-HHHH----HHHHHH----SCCSEEEEEECCCGGGTSSC-----
T ss_pred             ---cCCEEEEcCCCCC-------------cHHHHHH-HHHH----HHHHHc----CCccEEEEeCCccccccCCC-----
Confidence               5899999997531             0224443 4444    444442    11359999999762 22211     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-ch------hHhH------HHH
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-GI------LRGF------CNT  250 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-~~------~~~~------~~~  250 (313)
                                ....|+.+|++.+.+++.+       |  ++++.|+||++-++..... ..      ....      ...
T Consensus       123 ----------~~~~y~~sK~~~E~~~~~~-------g--i~~~ivrpg~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  183 (352)
T 1xgk_A          123 ----------PAVPMWAPKFTVENYVRQL-------G--LPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDP  183 (352)
T ss_dssp             ----------CCCTTTHHHHHHHHHHHTS-------S--SCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCT
T ss_pred             ----------CCccHHHHHHHHHHHHHHc-------C--CCEEEEecceecCCchhcccccccccccCCCceEEeeccCC
Confidence                      3457999999999988762       6  8889999998754332110 00      0000      000


Q ss_pred             HHHhhcCCh-HHHHHHHHHHHcc
Q 021391          251 VGKLVLKNI-PQGAATTCYVALH  272 (313)
Q Consensus       251 ~~~~~~~~~-~eva~~~~~l~~~  272 (313)
                      -.......+ +|+|++++.++.+
T Consensus       184 ~~~~~~i~v~~Dva~ai~~~l~~  206 (352)
T 1xgk_A          184 DIPLPWLDAEHDVGPALLQIFKD  206 (352)
T ss_dssp             TSCEEEECHHHHHHHHHHHHHHH
T ss_pred             CCceeeEecHHHHHHHHHHHHhC
Confidence            011123567 8999999999974

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.66  E-value=5.6e-16  Score=137.62  Aligned_cols=198  Identities=13%  Similarity=0.074  Sum_probs=131.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      +++||||| |+||++++++|+++|++|++++|+.++......        .++.++.+|++|.+            ..++
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--------~~~~~~~~D~~d~~------------~~~~   64 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA--------SGAEPLLWPGEEPS------------LDGV   64 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH--------TTEEEEESSSSCCC------------CTTC
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh--------CCCeEEEecccccc------------cCCC
Confidence            78999998 999999999999999999999999877654331        36889999999933            4579


Q ss_pred             eEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCC
Q 021391          110 NILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDE  189 (313)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~  189 (313)
                      |+|||+|+.....     +.              ..+.++..+.+..   ....++|++||...+...+ .   ..+++.
T Consensus        65 d~vi~~a~~~~~~-----~~--------------~~~~l~~a~~~~~---~~~~~~v~~Ss~~vyg~~~-~---~~~~E~  118 (286)
T 3ius_A           65 THLLISTAPDSGG-----DP--------------VLAALGDQIAARA---AQFRWVGYLSTTAVYGDHD-G---AWVDET  118 (286)
T ss_dssp             CEEEECCCCBTTB-----CH--------------HHHHHHHHHHHTG---GGCSEEEEEEEGGGGCCCT-T---CEECTT
T ss_pred             CEEEECCCccccc-----cH--------------HHHHHHHHHHhhc---CCceEEEEeecceecCCCC-C---CCcCCC
Confidence            9999999864321     00              1133334444311   1246899999976543221 1   123344


Q ss_pred             CCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchh-Hh----HHHHHHHhhcCChHHHHH
Q 021391          190 SAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGIL-RG----FCNTVGKLVLKNIPQGAA  264 (313)
Q Consensus       190 ~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~-~~----~~~~~~~~~~~~~~eva~  264 (313)
                      .+..+...|+.+|.+.+.+++.+      .|  ++++.+.||.+-.+........ ..    +...-........+|+|+
T Consensus       119 ~~~~p~~~Y~~sK~~~E~~~~~~------~~--~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  190 (286)
T 3ius_A          119 TPLTPTAARGRWRVMAEQQWQAV------PN--LPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKPGQVFSRIHVEDIAQ  190 (286)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHS------TT--CCEEEEEECEEEBTTBSSSTTSSSSCCCEEECTTCCBCEEEHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHHHHhh------cC--CCEEEEeccceECCCchHHHHHhcCCccccCCCCcccceEEHHHHHH
Confidence            45556678999999999888776      56  8999999999876643221000 00    000001112456799999


Q ss_pred             HHHHHHccCCccCCCceeecCC
Q 021391          265 TTCYVALHPQVQGVSGEYFSDS  286 (313)
Q Consensus       265 ~~~~l~~~~~~~~~tG~~~~~~  286 (313)
                      +++.++.++.    .|+.++..
T Consensus       191 a~~~~~~~~~----~g~~~~i~  208 (286)
T 3ius_A          191 VLAASMARPD----PGAVYNVC  208 (286)
T ss_dssp             HHHHHHHSCC----TTCEEEEC
T ss_pred             HHHHHHhCCC----CCCEEEEe
Confidence            9999998543    45555543

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.65  E-value=9.6e-16  Score=140.08  Aligned_cols=191  Identities=14%  Similarity=0.016  Sum_probs=128.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc----hhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM----AAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~----~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      |+.++||||||||+||++++++|+++|++|++++|+.    ++.+ ..+.+.    ..++.++.+|++|.+++.+++++.
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~~~l~----~~~v~~~~~Dl~d~~~l~~~~~~~   82 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAK-IFKALE----DKGAIIVYGLINEQEAMEKILKEH   82 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH-HHHHHH----HTTCEEEECCTTCHHHHHHHHHHT
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHH-HHHHHH----hCCcEEEEeecCCHHHHHHHHhhC
Confidence            4568999999999999999999999999999999976    2222 122222    246889999999999999888764


Q ss_pred             hhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          103 NSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                           ++|+|||++|.                 .|+.+..++++++...-        .-.++|+ |+ .+..       
T Consensus        83 -----~~d~Vi~~a~~-----------------~n~~~~~~l~~aa~~~g--------~v~~~v~-S~-~g~~-------  123 (346)
T 3i6i_A           83 -----EIDIVVSTVGG-----------------ESILDQIALVKAMKAVG--------TIKRFLP-SE-FGHD-------  123 (346)
T ss_dssp             -----TCCEEEECCCG-----------------GGGGGHHHHHHHHHHHC--------CCSEEEC-SC-CSSC-------
T ss_pred             -----CCCEEEECCch-----------------hhHHHHHHHHHHHHHcC--------CceEEee-cc-cCCC-------
Confidence                 79999999986                 27777777777765431        1235553 32 2211       


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchh------Hh----HHHHHH
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGIL------RG----FCNTVG  252 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~------~~----~~~~~~  252 (313)
                         .++..+..+...|+.+|.+++.+.+.       .|  +.+..++||.+-..........      ..    +.....
T Consensus       124 ---~~e~~~~~p~~~y~~sK~~~e~~l~~-------~g--~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~  191 (346)
T 3i6i_A          124 ---VNRADPVEPGLNMYREKRRVRQLVEE-------SG--IPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNV  191 (346)
T ss_dssp             ---TTTCCCCTTHHHHHHHHHHHHHHHHH-------TT--CCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCC
T ss_pred             ---CCccCcCCCcchHHHHHHHHHHHHHH-------cC--CCEEEEEecccccccCccccccccccCCCceEEEccCCCc
Confidence               12223334567899999998887764       46  8889999998866443221000      00    000001


Q ss_pred             HhhcCChHHHHHHHHHHHccC
Q 021391          253 KLVLKNIPQGAATTCYVALHP  273 (313)
Q Consensus       253 ~~~~~~~~eva~~~~~l~~~~  273 (313)
                      ...+..++|+|+.++.++.++
T Consensus       192 ~~~~i~~~Dva~~~~~~l~~~  212 (346)
T 3i6i_A          192 KAYFVAGTDIGKFTMKTVDDV  212 (346)
T ss_dssp             CEEEECHHHHHHHHHHHTTCG
T ss_pred             eEEecCHHHHHHHHHHHHhCc
Confidence            123568899999999999854

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.63  E-value=1.3e-15  Score=136.57  Aligned_cols=187  Identities=14%  Similarity=0.106  Sum_probs=120.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc-------hhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHH
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM-------AAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~-------~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      +++++||||||+||++++++|+++|++|++++|+.       ++.+.. +++..    .++.++.+|++|++++.++++ 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~----~~v~~v~~D~~d~~~l~~~~~-   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQS----LGVILLEGDINDHETLVKAIK-   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHH----TTCEEEECCTTCHHHHHHHHT-
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHh----CCCEEEEeCCCCHHHHHHHHh-
Confidence            57899999999999999999999999999999986       333322 23322    357899999999998887776 


Q ss_pred             HhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          102 YNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                            ++|+||||+|...                 +.+..++++++    .+.    +.-.++|  .|..+...     
T Consensus        76 ------~~d~vi~~a~~~~-----------------~~~~~~l~~aa----~~~----g~v~~~v--~S~~g~~~-----  117 (307)
T 2gas_A           76 ------QVDIVICAAGRLL-----------------IEDQVKIIKAI----KEA----GNVKKFF--PSEFGLDV-----  117 (307)
T ss_dssp             ------TCSEEEECSSSSC-----------------GGGHHHHHHHH----HHH----CCCSEEE--CSCCSSCT-----
T ss_pred             ------CCCEEEECCcccc-----------------cccHHHHHHHH----Hhc----CCceEEe--ecccccCc-----
Confidence                  6999999998632                 22333444443    332    1124665  34333110     


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc-h-----h-Hh---HHHHH
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG-I-----L-RG---FCNTV  251 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~-~-----~-~~---~~~~~  251 (313)
                        ++  .....+....| .+|++++.+++.       .|  ++++.++||++.+++..... .     . ..   +....
T Consensus       118 --~~--~~~~~p~~~~y-~sK~~~e~~~~~-------~~--i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (307)
T 2gas_A          118 --DR--HDAVEPVRQVF-EEKASIRRVIEA-------EG--VPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGN  183 (307)
T ss_dssp             --TS--CCCCTTHHHHH-HHHHHHHHHHHH-------HT--CCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSC
T ss_pred             --cc--ccCCCcchhHH-HHHHHHHHHHHH-------cC--CCeEEEEcceeeccccccccccccccCCCCeEEEecCCC
Confidence              00  01111234678 999998887753       35  88899999998776532210 0     0 00   00000


Q ss_pred             HHhhcCChHHHHHHHHHHHccC
Q 021391          252 GKLVLKNIPQGAATTCYVALHP  273 (313)
Q Consensus       252 ~~~~~~~~~eva~~~~~l~~~~  273 (313)
                      .......++|+|+.++.++.++
T Consensus       184 ~~~~~i~~~Dva~~~~~~l~~~  205 (307)
T 2gas_A          184 VKGAYVTEADVGTFTIRAANDP  205 (307)
T ss_dssp             SEEEEECHHHHHHHHHHHHTCG
T ss_pred             cceEEeeHHHHHHHHHHHHcCc
Confidence            1123468999999999999743

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.62  E-value=5.5e-15  Score=135.49  Aligned_cols=174  Identities=12%  Similarity=0.027  Sum_probs=117.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcC-----CEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           29 GLTAIVTGASSGIGTETARVLALRG-----VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G-----~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      ||++|||||+|+||++++++|+++|     ++|++++|+.....         ....++.++.+|++|.+++.++++.+ 
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~---------~~~~~~~~~~~Dl~d~~~~~~~~~~~-   70 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW---------HEDNPINYVQCDISDPDDSQAKLSPL-   70 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC---------CCSSCCEEEECCTTSHHHHHHHHTTC-
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc---------cccCceEEEEeecCCHHHHHHHHhcC-
Confidence            5789999999999999999999999     99999999865432         01346889999999999887776532 


Q ss_pred             hcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEE-------EECCcccccc
Q 021391          104 SQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIV-------NVSSEAHRFA  176 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv-------~isS~~~~~~  176 (313)
                         +++|+|||+||...       ++.+..+++|+.++.++++++.+...       .-.++|       ++||...+..
T Consensus        71 ---~~~d~vih~a~~~~-------~~~~~~~~~n~~~~~~l~~a~~~~~~-------~~~~~v~~~g~~i~~Ss~~vyg~  133 (364)
T 2v6g_A           71 ---TDVTHVFYVTWANR-------STEQENCEANSKMFRNVLDAVIPNCP-------NLKHISLQTGRKHYMGPFESYGK  133 (364)
T ss_dssp             ---TTCCEEEECCCCCC-------SSHHHHHHHHHHHHHHHHHHHTTTCT-------TCCEEEEECCTHHHHCCGGGTTT
T ss_pred             ---CCCCEEEECCCCCc-------chHHHHHHHhHHHHHHHHHHHHHhcc-------ccceEEeccCceEEEechhhccc
Confidence               24999999999642       35678899999999999998865421       133666       6777654322


Q ss_pred             ccCCCCCCCCCCCCCCCc-cccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcc
Q 021391          177 YSEGIRFDKINDESAYNS-FGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR  239 (313)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~-~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~  239 (313)
                      ....  ...+++..+..+ ...|    .+.+.+++.++.+.+  +  +++..+.|+.+-.+...
T Consensus       134 ~~~~--~~~~~E~~~~~~~~~~y----~~~E~~~~~~~~~~~--~--~~~~ilRp~~v~G~~~~  187 (364)
T 2v6g_A          134 IESH--DPPYTEDLPRLKYMNFY----YDLEDIMLEEVEKKE--G--LTWSVHRPGNIFGFSPY  187 (364)
T ss_dssp             SCCC--CSSBCTTSCCCSSCCHH----HHHHHHHHHHHTTST--T--CEEEEEEESSEECCCTT
T ss_pred             cccC--CCCCCccccCCccchhh----HHHHHHHHHHhhcCC--C--ceEEEECCCceeCCCCC
Confidence            1100  011222222111 3345    233444444332211  3  88999999999776543

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.61  E-value=6.7e-15  Score=141.85  Aligned_cols=204  Identities=15%  Similarity=0.075  Sum_probs=136.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      +++||||||+|+||++++++|+++|++|++++|+..+.                ..+.+|+.+..         .+.+.+
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~----------------~~v~~d~~~~~---------~~~l~~  201 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP----------------GKRFWDPLNPA---------SDLLDG  201 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT----------------TCEECCTTSCC---------TTTTTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc----------------cceeecccchh---------HHhcCC
Confidence            68999999999999999999999999999999986542                12577876531         223458


Q ss_pred             eeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCC
Q 021391          109 LNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIND  188 (313)
Q Consensus       109 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~  188 (313)
                      +|+|||+||..... ..+.+..+..+++|+.++.++++++.   .+     ....++|++||...+...+..   ..+++
T Consensus       202 ~D~Vih~A~~~~~~-~~~~~~~~~~~~~Nv~gt~~ll~a~a---~~-----~~~~r~V~~SS~~vyg~~~~~---~~~~E  269 (516)
T 3oh8_A          202 ADVLVHLAGEPIFG-RFNDSHKEAIRESRVLPTKFLAELVA---ES-----TQCTTMISASAVGFYGHDRGD---EILTE  269 (516)
T ss_dssp             CSEEEECCCC------CCGGGHHHHHHHTHHHHHHHHHHHH---HC-----SSCCEEEEEEEGGGGCSEEEE---EEECT
T ss_pred             CCEEEECCCCcccc-ccchhHHHHHHHHHHHHHHHHHHHHH---hc-----CCCCEEEEeCcceEecCCCCC---CccCC
Confidence            99999999975332 34566778899999999999999754   12     234689999997655311110   01222


Q ss_pred             CCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHH------------hhc
Q 021391          189 ESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGK------------LVL  256 (313)
Q Consensus       189 ~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~------------~~~  256 (313)
                      ..+. +...|+.+|...+.+.+    +....|  ++++.+.||.+-++...   +...+......            ...
T Consensus       270 ~~~~-~~~~y~~~~~~~E~~~~----~~~~~g--i~~~ilRp~~v~Gp~~~---~~~~~~~~~~~g~~~~~g~g~~~~~~  339 (516)
T 3oh8_A          270 ESES-GDDFLAEVCRDWEHATA----PASDAG--KRVAFIRTGVALSGRGG---MLPLLKTLFSTGLGGKFGDGTSWFSW  339 (516)
T ss_dssp             TSCC-CSSHHHHHHHHHHHTTH----HHHHTT--CEEEEEEECEEEBTTBS---HHHHHHHTTC---CCCCTTSCCEECE
T ss_pred             CCCC-CcChHHHHHHHHHHHHH----HHHhCC--CCEEEEEeeEEECCCCC---hHHHHHHHHHhCCCcccCCCCceEce
Confidence            2222 45568888887776543    344567  99999999999887532   12222111110            123


Q ss_pred             CChHHHHHHHHHHHccCCccCCCcee
Q 021391          257 KNIPQGAATTCYVALHPQVQGVSGEY  282 (313)
Q Consensus       257 ~~~~eva~~~~~l~~~~~~~~~tG~~  282 (313)
                      ..++|+|++++.++.++.   ..|.+
T Consensus       340 i~v~Dva~ai~~~l~~~~---~~g~~  362 (516)
T 3oh8_A          340 IAIDDLTDIYYRAIVDAQ---ISGPI  362 (516)
T ss_dssp             EEHHHHHHHHHHHHHCTT---CCEEE
T ss_pred             EeHHHHHHHHHHHHhCcc---cCCcE
Confidence            467999999999997543   34554

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.57  E-value=5.2e-15  Score=133.57  Aligned_cols=187  Identities=14%  Similarity=0.082  Sum_probs=116.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc-h----hHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM-A----AGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~-~----~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .++++||||+|+||++++++|+++|++|++++|+. .    ...+..+++.    ..++.++.+|++|++++.++++   
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~----~~~v~~v~~D~~d~~~l~~a~~---   76 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFR----SMGVTIIEGEMEEHEKMVSVLK---   76 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHH----HTTCEEEECCTTCHHHHHHHHT---
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhh----cCCcEEEEecCCCHHHHHHHHc---
Confidence            36799999999999999999999999999999986 2    1222222222    2358899999999999888776   


Q ss_pred             hcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          104 SQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                          ++|+||||+|...                 +.+.    +.+++.+.+.    +.-.++|  .|..+....      
T Consensus        77 ----~~d~vi~~a~~~~-----------------~~~~----~~l~~aa~~~----g~v~~~v--~S~~g~~~~------  119 (321)
T 3c1o_A           77 ----QVDIVISALPFPM-----------------ISSQ----IHIINAIKAA----GNIKRFL--PSDFGCEED------  119 (321)
T ss_dssp             ----TCSEEEECCCGGG-----------------SGGG----HHHHHHHHHH----CCCCEEE--CSCCSSCGG------
T ss_pred             ----CCCEEEECCCccc-----------------hhhH----HHHHHHHHHh----CCccEEe--ccccccCcc------
Confidence                5899999998531                 2222    3334444442    1124666  343331100      


Q ss_pred             CCCCCCCC-CCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccc----------cchhHhHHHHHH
Q 021391          184 DKINDESA-YNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY----------NGILRGFCNTVG  252 (313)
Q Consensus       184 ~~~~~~~~-~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~----------~~~~~~~~~~~~  252 (313)
                          +... .+....| .+|.+++.+++.       .|  ++++.|.||.+.++....          ......+.....
T Consensus       120 ----~~~~~~p~~~~y-~sK~~~e~~~~~-------~~--~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (321)
T 3c1o_A          120 ----RIKPLPPFESVL-EKKRIIRRAIEA-------AA--LPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGET  185 (321)
T ss_dssp             ----GCCCCHHHHHHH-HHHHHHHHHHHH-------HT--CCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCC
T ss_pred             ----ccccCCCcchHH-HHHHHHHHHHHH-------cC--CCeEEEEeceeccccccccccccccccccCceEEecCCCc
Confidence                0011 1124579 999999887763       25  777788898774432110          000000000001


Q ss_pred             HhhcCChHHHHHHHHHHHccC
Q 021391          253 KLVLKNIPQGAATTCYVALHP  273 (313)
Q Consensus       253 ~~~~~~~~eva~~~~~l~~~~  273 (313)
                      ......++|+|+.++.++.++
T Consensus       186 ~~~~i~~~Dva~~~~~~l~~~  206 (321)
T 3c1o_A          186 KFVLNYEEDIAKYTIKVACDP  206 (321)
T ss_dssp             EEEEECHHHHHHHHHHHHHCG
T ss_pred             ceeEeeHHHHHHHHHHHHhCc
Confidence            123568999999999999844

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.55  E-value=7.5e-15  Score=131.90  Aligned_cols=192  Identities=10%  Similarity=-0.002  Sum_probs=120.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCch-----hHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMA-----AGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~-----~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .++++||||||+||++++++|+++|++|++++|+..     +.+. .+++.    ..++.++.+|++|++++.++++   
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~----~~~~~~~~~D~~d~~~l~~~~~---   75 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQM-LLYFK----QLGAKLIEASLDDHQRLVDALK---   75 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHH-HHHHH----TTTCEEECCCSSCHHHHHHHHT---
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHH-HHHHH----hCCeEEEeCCCCCHHHHHHHHh---
Confidence            478999999999999999999999999999999853     2222 12221    3468899999999999887776   


Q ss_pred             hcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          104 SQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                          ++|+|||++|.....             .|+.+..++++++    .+.    +.-.++|+  |..+...       
T Consensus        76 ----~~d~vi~~a~~~~~~-------------~~~~~~~~l~~aa----~~~----g~v~~~v~--S~~g~~~-------  121 (313)
T 1qyd_A           76 ----QVDVVISALAGGVLS-------------HHILEQLKLVEAI----KEA----GNIKRFLP--SEFGMDP-------  121 (313)
T ss_dssp             ----TCSEEEECCCCSSSS-------------TTTTTHHHHHHHH----HHS----CCCSEEEC--SCCSSCT-------
T ss_pred             ----CCCEEEECCccccch-------------hhHHHHHHHHHHH----Hhc----CCCceEEe--cCCcCCc-------
Confidence                689999999865321             1455555555554    331    11347763  3332111       


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-----------chhHhHHHHHH
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-----------GILRGFCNTVG  252 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-----------~~~~~~~~~~~  252 (313)
                      ...+ ....+....| .+|.+++.+++.       .|  ++++.+.||++.++.....           .....+.....
T Consensus       122 ~~~~-~~~~p~~~~y-~sK~~~e~~~~~-------~g--~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  190 (313)
T 1qyd_A          122 DIME-HALQPGSITF-IDKRKVRRAIEA-------AS--IPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNV  190 (313)
T ss_dssp             TSCC-CCCSSTTHHH-HHHHHHHHHHHH-------TT--CCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCS
T ss_pred             cccc-cCCCCCcchH-HHHHHHHHHHHh-------cC--CCeEEEEeceeccccccccccccccccCCCCeEEEeCCCCc
Confidence            0010 1111224568 999998887652       45  7788889988754221110           00000000001


Q ss_pred             HhhcCChHHHHHHHHHHHccC
Q 021391          253 KLVLKNIPQGAATTCYVALHP  273 (313)
Q Consensus       253 ~~~~~~~~eva~~~~~l~~~~  273 (313)
                      ......++|+|+.++.++.++
T Consensus       191 ~~~~i~~~Dva~~~~~~l~~~  211 (313)
T 1qyd_A          191 KGIWVDEDDVGTYTIKSIDDP  211 (313)
T ss_dssp             EEEEECHHHHHHHHHHHTTCG
T ss_pred             eEEEEEHHHHHHHHHHHHhCc
Confidence            123467899999999999744

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.50  E-value=1e-13  Score=125.02  Aligned_cols=186  Identities=11%  Similarity=0.097  Sum_probs=115.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      +++|||||+|+||++++++|+++|++|++++|+.+......+++..    .++.++.+|++|++++.++++       ++
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~----~~v~~v~~Dl~d~~~l~~a~~-------~~   80 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS----LGAIIVKGELDEHEKLVELMK-------KV   80 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH----TTCEEEECCTTCHHHHHHHHT-------TC
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc----CCCEEEEecCCCHHHHHHHHc-------CC
Confidence            6899999999999999999999999999999987522222233322    357899999999999888776       58


Q ss_pred             eEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCC
Q 021391          110 NILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDE  189 (313)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~  189 (313)
                      |+|||+++...                 +.+.    +.+++.+.+.    +.-.++|+  |..+...          ++.
T Consensus        81 d~vi~~a~~~~-----------------~~~~----~~l~~aa~~~----g~v~~~v~--S~~g~~~----------~~~  123 (318)
T 2r6j_A           81 DVVISALAFPQ-----------------ILDQ----FKILEAIKVA----GNIKRFLP--SDFGVEE----------DRI  123 (318)
T ss_dssp             SEEEECCCGGG-----------------STTH----HHHHHHHHHH----CCCCEEEC--SCCSSCT----------TTC
T ss_pred             CEEEECCchhh-----------------hHHH----HHHHHHHHhc----CCCCEEEe--eccccCc----------ccc
Confidence            99999998531                 2223    3333444442    11346653  3332110          011


Q ss_pred             CCCC-ccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccc-------cchhHhHHHHHHHhhcCChHH
Q 021391          190 SAYN-SFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRY-------NGILRGFCNTVGKLVLKNIPQ  261 (313)
Q Consensus       190 ~~~~-~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~-------~~~~~~~~~~~~~~~~~~~~e  261 (313)
                      .... ....| .+|.+++.+++.       .|  +.+..+.||.+.......       ......+...........++|
T Consensus       124 ~~~~p~~~~y-~sK~~~e~~~~~-------~~--~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  193 (318)
T 2r6j_A          124 NALPPFEALI-ERKRMIRRAIEE-------AN--IPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQD  193 (318)
T ss_dssp             CCCHHHHHHH-HHHHHHHHHHHH-------TT--CCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECHHH
T ss_pred             cCCCCcchhH-HHHHHHHHHHHh-------cC--CCeEEEEcceehhhhhhhhccccCCCCceEEecCCCceeeEeeHHH
Confidence            1111 23568 999998877653       45  777888998764321110       000000000001122457899


Q ss_pred             HHHHHHHHHccC
Q 021391          262 GAATTCYVALHP  273 (313)
Q Consensus       262 va~~~~~l~~~~  273 (313)
                      +|+.++.++.++
T Consensus       194 va~~~~~~l~~~  205 (318)
T 2r6j_A          194 IGLYTIKVATDP  205 (318)
T ss_dssp             HHHHHHHHTTCG
T ss_pred             HHHHHHHHhcCc
Confidence            999999999744

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.46  E-value=2.8e-13  Score=121.29  Aligned_cols=190  Identities=13%  Similarity=0.120  Sum_probs=115.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhH--HHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAG--KDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~--~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      .++++||||||+||++++++|+++|++|++++|+....  .+..+.+... ...++.++.+|++|++++.++++      
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l-~~~~v~~v~~D~~d~~~l~~~~~------   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESF-KASGANIVHGSIDDHASLVEAVK------   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHH-HTTTCEEECCCTTCHHHHHHHHH------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHH-HhCCCEEEEeccCCHHHHHHHHc------
Confidence            47899999999999999999999999999999985322  1111111110 13468899999999999888876      


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                       ++|+|||+++...                 +.+...++++    +.+.    +.-.++| . |..+...          
T Consensus        77 -~~d~vi~~a~~~~-----------------~~~~~~l~~a----a~~~----g~v~~~v-~-S~~g~~~----------  118 (308)
T 1qyc_A           77 -NVDVVISTVGSLQ-----------------IESQVNIIKA----IKEV----GTVKRFF-P-SEFGNDV----------  118 (308)
T ss_dssp             -TCSEEEECCCGGG-----------------SGGGHHHHHH----HHHH----CCCSEEE-C-SCCSSCT----------
T ss_pred             -CCCEEEECCcchh-----------------hhhHHHHHHH----HHhc----CCCceEe-e-cccccCc----------
Confidence             5899999998531                 2222333433    3442    1134666 3 3332110          


Q ss_pred             CCCCC-CCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-c---------hhHhHHHHHHHhh
Q 021391          187 NDESA-YNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-G---------ILRGFCNTVGKLV  255 (313)
Q Consensus       187 ~~~~~-~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-~---------~~~~~~~~~~~~~  255 (313)
                      ++... .+....| .+|.+++.+++.       .|  ++++.+.||.+.++..... .         ....+........
T Consensus       119 ~~~~~~~p~~~~y-~sK~~~e~~~~~-------~~--~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (308)
T 1qyc_A          119 DNVHAVEPAKSVF-EVKAKVRRAIEA-------EG--IPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVV  188 (308)
T ss_dssp             TSCCCCTTHHHHH-HHHHHHHHHHHH-------HT--CCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEE
T ss_pred             cccccCCcchhHH-HHHHHHHHHHHh-------cC--CCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEE
Confidence            01111 1124578 999998887764       35  7778889987754321110 0         0000000001122


Q ss_pred             cCChHHHHHHHHHHHccC
Q 021391          256 LKNIPQGAATTCYVALHP  273 (313)
Q Consensus       256 ~~~~~eva~~~~~l~~~~  273 (313)
                      ...++|+|+.++.++.++
T Consensus       189 ~i~~~Dva~~~~~~l~~~  206 (308)
T 1qyc_A          189 FVKEEDIGTFTIKAVDDP  206 (308)
T ss_dssp             EECHHHHHHHHHTTSSCG
T ss_pred             EecHHHHHHHHHHHHhCc
Confidence            457899999999998743

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.43  E-value=1.2e-13  Score=123.32  Aligned_cols=109  Identities=19%  Similarity=0.249  Sum_probs=88.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .++++||++|||||+||+|+++++.|+++|++|++++|+.++.+++.+++...   .++.++.+|+++++++.++++   
T Consensus       114 ~~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~---~~~~~~~~D~~~~~~~~~~~~---  187 (287)
T 1lu9_A          114 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR---FKVNVTAAETADDASRAEAVK---  187 (287)
T ss_dssp             TSCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH---HTCCCEEEECCSHHHHHHHTT---
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEecCCCHHHHHHHHH---
Confidence            46789999999999999999999999999999999999998888887777543   136678899999998877665   


Q ss_pred             hcCCCeeEEEEcccCCCC--CC-ccCc-cchhhhhhhhhhHHH
Q 021391          104 SQGRPLNILINNAGIMAS--PF-MLSK-DNIELQFATNHLGHF  142 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~--~~-~~~~-~~~~~~~~~n~~~~~  142 (313)
                          .+|+||||+|....  +. +.+. +.++..+++|+.+++
T Consensus       188 ----~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          188 ----GAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             ----TCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             ----hCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence                47999999986432  22 3443 677788888888766

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.37  E-value=6.2e-12  Score=112.25  Aligned_cols=201  Identities=15%  Similarity=0.062  Sum_probs=120.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      ++||||||||.||++++++|.++|++|+++.|++..              ..   +..|     .+      ..+...++
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~--------------~~---~~~~-----~~------~~~~l~~~   52 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP--------------GR---ITWD-----EL------AASGLPSC   52 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT--------------TE---EEHH-----HH------HHHCCCSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc--------------Ce---eecc-----hh------hHhhccCC
Confidence            469999999999999999999999999999997532              11   1111     11      01234579


Q ss_pred             eEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCC
Q 021391          110 NILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIN  187 (313)
Q Consensus       110 d~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  187 (313)
                      |.+||++|.....  ...+....+..++.|+.++..+++.+...-       .+...+|+.||...+....    ....+
T Consensus        53 d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~-------~~~~~~i~~Ss~~vyg~~~----~~~~~  121 (298)
T 4b4o_A           53 DAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAP-------QPPKAWVLVTGVAYYQPSL----TAEYD  121 (298)
T ss_dssp             SEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCS-------SCCSEEEEEEEGGGSCCCS----SCCBC
T ss_pred             CEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhC-------CCceEEEEEeeeeeecCCC----CCccc
Confidence            9999999853221  234555566778889888877776654321       1233456666655443221    11233


Q ss_pred             CCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHh------------h
Q 021391          188 DESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKL------------V  255 (313)
Q Consensus       188 ~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~------------~  255 (313)
                      ++.+..+...|+..+...+.     +......+  +++..+.||.+-.+....   ...+.......            .
T Consensus       122 E~~p~~~~~~~~~~~~~~e~-----~~~~~~~~--~~~~~~r~~~v~g~~~~~---~~~~~~~~~~~~~~~~g~g~~~~~  191 (298)
T 4b4o_A          122 EDSPGGDFDFFSNLVTKWEA-----AARLPGDS--TRQVVVRSGVVLGRGGGA---MGHMLLPFRLGLGGPIGSGHQFFP  191 (298)
T ss_dssp             TTCCCSCSSHHHHHHHHHHH-----HHCCSSSS--SEEEEEEECEEECTTSHH---HHHHHHHHHTTCCCCBTTSCSBCC
T ss_pred             ccCCccccchhHHHHHHHHH-----HHHhhccC--CceeeeeeeeEEcCCCCc---hhHHHHHHhcCCcceecccCceee
Confidence            34444444455555554433     22334556  899999999987764321   11111111110            1


Q ss_pred             cCChHHHHHHHHHHHccCCccCCCcee
Q 021391          256 LKNIPQGAATTCYVALHPQVQGVSGEY  282 (313)
Q Consensus       256 ~~~~~eva~~~~~l~~~~~~~~~tG~~  282 (313)
                      +...+|+++++++++.++.   ..|.|
T Consensus       192 ~ihv~Dva~a~~~~~~~~~---~~g~y  215 (298)
T 4b4o_A          192 WIHIGDLAGILTHALEANH---VHGVL  215 (298)
T ss_dssp             EEEHHHHHHHHHHHHHCTT---CCEEE
T ss_pred             cCcHHHHHHHHHHHHhCCC---CCCeE
Confidence            2457999999999997543   45644

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.24  E-value=1e-11  Score=112.68  Aligned_cols=172  Identities=12%  Similarity=0.007  Sum_probs=111.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-------EEEEEecCc--hhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHH
Q 021391           30 LTAIVTGASSGIGTETARVLALRGV-------HVIMAVRNM--AAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFAS  100 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~-------~V~l~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~  100 (313)
                      ++++||||+|.||.+++..|+++|.       .|++++++.  ++.+.....+...    .+.++ .|+.+.++....+ 
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~----~~~~~-~di~~~~~~~~a~-   78 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC----AFPLL-AGLEATDDPKVAF-   78 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT----TCTTE-EEEEEESCHHHHT-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcc----ccccc-CCeEeccChHHHh-
Confidence            5799999999999999999999996       799999864  2233222333221    11122 4666544444333 


Q ss_pred             HHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          101 EYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       101 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                            .+.|+|||+||....+    .+.....++.|+.+...+++++..+-       ..+++++++|+........ .
T Consensus        79 ------~~~D~Vih~Ag~~~~~----~~~~~~~~~~Nv~~t~~l~~a~~~~~-------~~~~~vvv~snp~~~~~~~-~  140 (327)
T 1y7t_A           79 ------KDADYALLVGAAPRKA----GMERRDLLQVNGKIFTEQGRALAEVA-------KKDVKVLVVGNPANTNALI-A  140 (327)
T ss_dssp             ------TTCSEEEECCCCCCCT----TCCHHHHHHHHHHHHHHHHHHHHHHS-------CTTCEEEECSSSHHHHHHH-H
T ss_pred             ------CCCCEEEECCCcCCCC----CCCHHHHHHHHHHHHHHHHHHHHhhc-------CCCeEEEEeCCchhhhHHH-H
Confidence                  2689999999976432    23456789999999999999887642       0245888888765211100 0


Q ss_pred             CCCCCCCCCC-CCCccccchHhHHHHHHHHHHHHHHhccCCCcEE-EEEeeCc
Q 021391          181 IRFDKINDES-AYNSFGAYGQSKLANILHAKELAKHLKEDGVNIT-ANSLHPG  231 (313)
Q Consensus       181 ~~~~~~~~~~-~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~-vn~i~PG  231 (313)
                            .+.. .+++...|+.+|...+.+.+.++..++-.-..|| ++.+-|+
T Consensus       141 ------~~~~~~~~p~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h  187 (327)
T 1y7t_A          141 ------YKNAPGLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNH  187 (327)
T ss_dssp             ------HHTCTTSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCS
T ss_pred             ------HHHcCCCChhheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCC
Confidence                  0011 2345567999999999999998887653222255 3445553

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.10  E-value=1.7e-10  Score=98.45  Aligned_cols=113  Identities=19%  Similarity=0.202  Sum_probs=72.7

Q ss_pred             CCCCCEEEEeCC----------------CCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccC
Q 021391           26 DGTGLTAIVTGA----------------SSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDV   89 (313)
Q Consensus        26 ~~~gk~~lItGa----------------s~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~   89 (313)
                      +|+||+||||||                |||||+++|+.|+++|++|++++++.. ++         .+. .+  -.+|+
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~---------~~~-g~--~~~dv   71 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP---------TPP-FV--KRVDV   71 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC---------CCT-TE--EEEEC
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc---------cCC-CC--eEEcc
Confidence            478999999999                689999999999999999999988652 11         011 22  35688


Q ss_pred             CCHHHHHHHHHHHhhcCCCeeEEEEcccCCCC-CCccCccchhhh--hhhhhhHHHHHHHHHHHHHHH
Q 021391           90 SSLASVRKFASEYNSQGRPLNILINNAGIMAS-PFMLSKDNIELQ--FATNHLGHFLLTHLLLDTMKK  154 (313)
Q Consensus        90 s~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~--~~~n~~~~~~l~~~~~~~l~~  154 (313)
                      ++.++   +++.+.+.++++|++|||||+... +...+.+.+.+.  -+.++.-.+....-+++.+.+
T Consensus        72 ~~~~~---~~~~v~~~~~~~Dili~~Aav~d~~p~~~~~~KIkk~~~~~~~l~l~L~~~pdIL~~l~~  136 (226)
T 1u7z_A           72 MTALE---MEAAVNASVQQQNIFIGCAAVADYRAATVAPEKIKKQATQGDELTIKMVKNPDIVAGVAA  136 (226)
T ss_dssp             CSHHH---HHHHHHHHGGGCSEEEECCBCCSEEESSCCSSCC-------CEEEEEEEECCCHHHHHHH
T ss_pred             CcHHH---HHHHHHHhcCCCCEEEECCcccCCCCccCChHHhccccccCCceEEEEeecHHHHHHHHh
Confidence            87544   566667778899999999997632 223333334331  012222233334445555554

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.90  E-value=7.1e-09  Score=78.83  Aligned_cols=74  Identities=23%  Similarity=0.223  Sum_probs=61.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcC-CEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRG-VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      .+++++|+|+ |++|+++++.|++.| ++|++++|+.++.+...        ...+.++.+|+++.+++.++++      
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~------   68 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN--------RMGVATKQVDAKDEAGLAKALG------   68 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH--------TTTCEEEECCTTCHHHHHHHTT------
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH--------hCCCcEEEecCCCHHHHHHHHc------
Confidence            3578999999 999999999999999 89999999987766543        2356788999999887776654      


Q ss_pred             CCeeEEEEccc
Q 021391          107 RPLNILINNAG  117 (313)
Q Consensus       107 g~id~lv~~ag  117 (313)
                       ++|++|++++
T Consensus        69 -~~d~vi~~~~   78 (118)
T 3ic5_A           69 -GFDAVISAAP   78 (118)
T ss_dssp             -TCSEEEECSC
T ss_pred             -CCCEEEECCC
Confidence             7899999996

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.86  E-value=1e-09  Score=93.76  Aligned_cols=78  Identities=14%  Similarity=0.239  Sum_probs=57.7

Q ss_pred             CCCEEEEeCC----------------CCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCC
Q 021391           28 TGLTAIVTGA----------------SSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSS   91 (313)
Q Consensus        28 ~gk~~lItGa----------------s~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~   91 (313)
                      +||+||||||                ||++|+++|+.|+++|++|++++|+.....        .. ...+  ...|+. 
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~--------~~-~~~~--~~~~v~-   69 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP--------EP-HPNL--SIREIT-   69 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC--------CC-CTTE--EEEECC-
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------cC-CCCe--EEEEHh-
Confidence            5899999999                788999999999999999999998753210        00 1123  233444 


Q ss_pred             HHHHHHHHHHHhhcCCCeeEEEEcccCC
Q 021391           92 LASVRKFASEYNSQGRPLNILINNAGIM  119 (313)
Q Consensus        92 ~~~v~~~~~~~~~~~g~id~lv~~ag~~  119 (313)
                        ++.++++.+.+.++++|++||||++.
T Consensus        70 --s~~em~~~v~~~~~~~Dili~aAAvs   95 (232)
T 2gk4_A           70 --NTKDLLIEMQERVQDYQVLIHSMAVS   95 (232)
T ss_dssp             --SHHHHHHHHHHHGGGCSEEEECSBCC
T ss_pred             --HHHHHHHHHHHhcCCCCEEEEcCccc
Confidence              45556666666778899999999975

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.81  E-value=9.3e-09  Score=86.00  Aligned_cols=79  Identities=13%  Similarity=0.264  Sum_probs=57.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .|+++|||||++|||+++++.+...|++|++++|+.++.+.+.    + . +..   ..+|.++.+..+.+.+...  .+
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~----~-~-g~~---~~~d~~~~~~~~~~~~~~~--~~  106 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS----R-L-GVE---YVGDSRSVDFADEILELTD--GY  106 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----T-T-CCS---EEEETTCSTHHHHHHHHTT--TC
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----H-c-CCC---EEeeCCcHHHHHHHHHHhC--CC
Confidence            6899999999999999999999999999999999876654332    1 1 222   2357777655444443321  23


Q ss_pred             CeeEEEEccc
Q 021391          108 PLNILINNAG  117 (313)
Q Consensus       108 ~id~lv~~ag  117 (313)
                      ++|++|+|+|
T Consensus       107 ~~D~vi~~~g  116 (198)
T 1pqw_A          107 GVDVVLNSLA  116 (198)
T ss_dssp             CEEEEEECCC
T ss_pred             CCeEEEECCc
Confidence            6999999997

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.79  E-value=5.4e-09  Score=84.54  Aligned_cols=76  Identities=12%  Similarity=0.162  Sum_probs=62.3

Q ss_pred             chHHHHHHHHHHcCCEEEEEecCchhHH---HHHHHHHHhCCCCceEEEEccCCCH--HHHHHHHHHHhhcCCCeeEEEE
Q 021391           40 GIGTETARVLALRGVHVIMAVRNMAAGK---DVREAIVKEIPSAKVDAMELDVSSL--ASVRKFASEYNSQGRPLNILIN  114 (313)
Q Consensus        40 giG~aia~~La~~G~~V~l~~r~~~~~~---~~~~~l~~~~~~~~~~~~~~D~s~~--~~v~~~~~~~~~~~g~id~lv~  114 (313)
                      -++.++++.|+++|++|++..|+.....   +..+.+.+.  +.++..+.+|++++  ++++++++.+.+.+|+ |+|||
T Consensus        27 ~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~--G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVn  103 (157)
T 3gxh_A           27 LPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQA--GMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVH  103 (157)
T ss_dssp             CCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHT--TCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEE
T ss_pred             CCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHc--CCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEE
Confidence            4779999999999999999988754432   123334333  56788899999999  9999999999999999 99999


Q ss_pred             cccC
Q 021391          115 NAGI  118 (313)
Q Consensus       115 ~ag~  118 (313)
                      |+|+
T Consensus       104 nAgg  107 (157)
T 3gxh_A          104 CLAN  107 (157)
T ss_dssp             CSBS
T ss_pred             CCCC
Confidence            9986

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.78  E-value=3.8e-08  Score=91.73  Aligned_cols=82  Identities=21%  Similarity=0.338  Sum_probs=71.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC---CEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           30 LTAIVTGASSGIGTETARVLALRG---VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G---~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      ++++|+|| ||||+++++.|+++|   ..|++++|+.+++++..+++.... +.++..+.+|++|.+++++++++.    
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~-~~~~~~~~~D~~d~~~l~~~l~~~----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKG-YGEIDITTVDADSIEELVALINEV----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTT-CCCCEEEECCTTCHHHHHHHHHHH----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhc-CCceEEEEecCCCHHHHHHHHHhh----
Confidence            57999999 899999999999998   499999999999998888776542 246889999999999999999876    


Q ss_pred             CCeeEEEEcccC
Q 021391          107 RPLNILINNAGI  118 (313)
Q Consensus       107 g~id~lv~~ag~  118 (313)
                       ++|+||||+|.
T Consensus        76 -~~DvVin~ag~   86 (405)
T 4ina_A           76 -KPQIVLNIALP   86 (405)
T ss_dssp             -CCSEEEECSCG
T ss_pred             -CCCEEEECCCc
Confidence             69999999985

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.66  E-value=1.3e-08  Score=90.52  Aligned_cols=84  Identities=20%  Similarity=0.233  Sum_probs=63.0

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .++++||+++|||++ |+|+++++.|++.| +|++++|+.++++++.+++....... . .+.+|+++.          .
T Consensus       123 ~~~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~-~-~~~~d~~~~----------~  188 (287)
T 1nvt_A          123 IGRVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKK-F-GEEVKFSGL----------D  188 (287)
T ss_dssp             HCCCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCC-H-HHHEEEECT----------T
T ss_pred             CCCcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccc-c-ceeEEEeeH----------H
Confidence            357899999999997 99999999999999 99999999988888877765431001 0 122344441          3


Q ss_pred             hcCCCeeEEEEcccCCCC
Q 021391          104 SQGRPLNILINNAGIMAS  121 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~  121 (313)
                      +..+++|+||||+|....
T Consensus       189 ~~~~~~DilVn~ag~~~~  206 (287)
T 1nvt_A          189 VDLDGVDIIINATPIGMY  206 (287)
T ss_dssp             CCCTTCCEEEECSCTTCT
T ss_pred             HhhCCCCEEEECCCCCCC
Confidence            456789999999997543

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.64  E-value=1.1e-10  Score=109.79  Aligned_cols=47  Identities=21%  Similarity=0.273  Sum_probs=41.3

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVR   70 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~   70 (313)
                      .++.+.||+++|||++ +||+++|+.|+..|++|++++++....++..
T Consensus       259 tg~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa  305 (488)
T 3ond_A          259 TDVMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQAT  305 (488)
T ss_dssp             HCCCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             cCCcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            4567999999999998 9999999999999999999999977665544

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.64  E-value=6.1e-08  Score=91.48  Aligned_cols=79  Identities=19%  Similarity=0.252  Sum_probs=62.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      |++|+++|+| +|++|+++++.|++.|++|++++|+.+++++..+    ..  ..+..+.+|+++.+++.++++      
T Consensus         1 M~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~----~~--~~~~~~~~Dv~d~~~l~~~l~------   67 (450)
T 1ff9_A            1 MATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSA----GV--QHSTPISLDVNDDAALDAEVA------   67 (450)
T ss_dssp             -CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTT----TC--TTEEEEECCTTCHHHHHHHHT------
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHH----hc--CCceEEEeecCCHHHHHHHHc------
Confidence            3578999998 7999999999999999999999999766554332    21  136788999999988877664      


Q ss_pred             CCeeEEEEcccCC
Q 021391          107 RPLNILINNAGIM  119 (313)
Q Consensus       107 g~id~lv~~ag~~  119 (313)
                       ++|+||||++..
T Consensus        68 -~~DvVIn~a~~~   79 (450)
T 1ff9_A           68 -KHDLVISLIPYT   79 (450)
T ss_dssp             -TSSEEEECCC--
T ss_pred             -CCcEEEECCccc
Confidence             699999999864

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.62  E-value=8.8e-08  Score=86.68  Aligned_cols=80  Identities=16%  Similarity=0.269  Sum_probs=61.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      -.|+++|||||++|||.++++.+...|++|++++++.++.+.+ +++     +..   ..+|.++.+++.+.+.++..  
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~-----g~~---~~~d~~~~~~~~~~~~~~~~--  212 (333)
T 1v3u_A          144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI-----GFD---AAFNYKTVNSLEEALKKASP--  212 (333)
T ss_dssp             CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT-----TCS---EEEETTSCSCHHHHHHHHCT--
T ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc-----CCc---EEEecCCHHHHHHHHHHHhC--
Confidence            3689999999999999999999999999999999987776654 332     222   23577774445555555433  


Q ss_pred             CCeeEEEEccc
Q 021391          107 RPLNILINNAG  117 (313)
Q Consensus       107 g~id~lv~~ag  117 (313)
                      +++|++|+|+|
T Consensus       213 ~~~d~vi~~~g  223 (333)
T 1v3u_A          213 DGYDCYFDNVG  223 (333)
T ss_dssp             TCEEEEEESSC
T ss_pred             CCCeEEEECCC
Confidence            58999999998

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.59  E-value=5.6e-08  Score=88.59  Aligned_cols=81  Identities=14%  Similarity=0.113  Sum_probs=61.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      -.|+++||+||+||||.++++.+...|++|++++|+.++.+.+ +++     +..   ..+|.++.+++.+.+.++... 
T Consensus       168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~-~~~-----g~~---~~~d~~~~~~~~~~~~~~~~~-  237 (347)
T 2hcy_A          168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF-RSI-----GGE---VFIDFTKEKDIVGAVLKATDG-  237 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH-HHT-----TCC---EEEETTTCSCHHHHHHHHHTS-
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH-HHc-----CCc---eEEecCccHhHHHHHHHHhCC-
Confidence            3689999999999999999999999999999999988776433 222     222   234877655566666665443 


Q ss_pred             CCeeEEEEcccC
Q 021391          107 RPLNILINNAGI  118 (313)
Q Consensus       107 g~id~lv~~ag~  118 (313)
                       ++|++|+|+|.
T Consensus       238 -~~D~vi~~~g~  248 (347)
T 2hcy_A          238 -GAHGVINVSVS  248 (347)
T ss_dssp             -CEEEEEECSSC
T ss_pred             -CCCEEEECCCc
Confidence             79999999983

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.58  E-value=5.4e-07  Score=80.81  Aligned_cols=86  Identities=26%  Similarity=0.296  Sum_probs=67.9

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecC---chhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRN---MAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKF   98 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~   98 (313)
                      ..++++||++||+|+ ||+|++++..|++.|+ +|++++|+   .++++++.+++....+   ......++.+.+++.+.
T Consensus       148 ~~~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~---~~~~~~~~~~~~~l~~~  223 (315)
T 3tnl_A          148 AGHDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTD---CKAQLFDIEDHEQLRKE  223 (315)
T ss_dssp             TTCCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS---CEEEEEETTCHHHHHHH
T ss_pred             cCCCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcC---CceEEeccchHHHHHhh
Confidence            356789999999998 6999999999999999 89999999   8888888888776542   33444567776665554


Q ss_pred             HHHHhhcCCCeeEEEEcccCC
Q 021391           99 ASEYNSQGRPLNILINNAGIM  119 (313)
Q Consensus        99 ~~~~~~~~g~id~lv~~ag~~  119 (313)
                      +.       ..|+|||+....
T Consensus       224 l~-------~aDiIINaTp~G  237 (315)
T 3tnl_A          224 IA-------ESVIFTNATGVG  237 (315)
T ss_dssp             HH-------TCSEEEECSSTT
T ss_pred             hc-------CCCEEEECccCC
Confidence            44       579999998654

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.58  E-value=3e-08  Score=95.44  Aligned_cols=103  Identities=20%  Similarity=0.243  Sum_probs=68.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      +++||++|||||+ |+|++++..|++.|++|++++|+.++++++.+++     +..+.    ++.+.           +.
T Consensus       361 ~l~~k~vlV~GaG-Gig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~-----~~~~~----~~~dl-----------~~  419 (523)
T 2o7s_A          361 PLASKTVVVIGAG-GAGKALAYGAKEKGAKVVIANRTYERALELAEAI-----GGKAL----SLTDL-----------DN  419 (523)
T ss_dssp             -----CEEEECCS-HHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHT-----TC-CE----ETTTT-----------TT
T ss_pred             ccCCCEEEEECCc-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCcee----eHHHh-----------hh
Confidence            5789999999995 9999999999999999999999988877766554     22222    22221           11


Q ss_pred             --CCCeeEEEEcccCCCC------CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHh
Q 021391          106 --GRPLNILINNAGIMAS------PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKT  155 (313)
Q Consensus       106 --~g~id~lv~~ag~~~~------~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~  155 (313)
                        .+.+|++|||+|+...      +. +...+.+...+++|+.+..      .|+|.+.
T Consensus       420 ~~~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~------T~ll~~a  472 (523)
T 2o7s_A          420 YHPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRI------TRLLREA  472 (523)
T ss_dssp             C--CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSSS------CHHHHHH
T ss_pred             ccccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCcc------CHHHHHH
Confidence              1358999999997532      12 3455678888999998653      2556553

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.54  E-value=8.2e-08  Score=88.36  Aligned_cols=107  Identities=18%  Similarity=0.229  Sum_probs=73.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      .+.+++++|+|+ |+||+++++.|...|++|++++|+.++.+.+.+.+     +..   +.+|.++.+++.+++.     
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~-----g~~---~~~~~~~~~~l~~~~~-----  228 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF-----GGR---VITLTATEANIKKSVQ-----  228 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----TTS---EEEEECCHHHHHHHHH-----
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc-----Cce---EEEecCCHHHHHHHHh-----
Confidence            478899999999 99999999999999999999999987766543322     222   4567788877776664     


Q ss_pred             CCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391          106 GRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                        +.|++|+|+|.....                 .+..+.+..++.|++       ++.||++++..
T Consensus       229 --~~DvVi~~~g~~~~~-----------------~~~li~~~~l~~mk~-------gg~iV~v~~~~  269 (369)
T 2eez_A          229 --HADLLIGAVLVPGAK-----------------APKLVTRDMLSLMKE-------GAVIVDVAVDQ  269 (369)
T ss_dssp             --HCSEEEECCC------------------------CCSCHHHHTTSCT-------TCEEEECC---
T ss_pred             --CCCEEEECCCCCccc-----------------cchhHHHHHHHhhcC-------CCEEEEEecCC
Confidence              589999999864210                 011223445555533       68999998754

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.52  E-value=1.1e-06  Score=79.42  Aligned_cols=162  Identities=13%  Similarity=-0.002  Sum_probs=101.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-------EEEEEecC----chhHHHHHHHHHHhCCCCceEEEEccCCCHHHHH
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGV-------HVIMAVRN----MAAGKDVREAIVKEIPSAKVDAMELDVSSLASVR   96 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~-------~V~l~~r~----~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~   96 (313)
                      +.++++||||+|.+|.+++..|+..|.       .|++.+++    .++++.....+....  ..+.   .|+....+..
T Consensus         4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~--~~~~---~~i~~~~~~~   78 (329)
T 1b8p_A            4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCA--FPLL---AGMTAHADPM   78 (329)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTT--CTTE---EEEEEESSHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhc--cccc---CcEEEecCcH
Confidence            346899999999999999999999885       79999988    555555455554421  1111   2333333333


Q ss_pred             HHHHHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccc
Q 021391           97 KFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFA  176 (313)
Q Consensus        97 ~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~  176 (313)
                      ..+       ...|++||+||....+.    ......+..|+.....+++.+..+-       +.++++|++|.......
T Consensus        79 ~al-------~~aD~Vi~~ag~~~~~g----~~r~dl~~~N~~i~~~i~~~i~~~~-------~p~a~ii~~SNPv~~~t  140 (329)
T 1b8p_A           79 TAF-------KDADVALLVGARPRGPG----MERKDLLEANAQIFTVQGKAIDAVA-------SRNIKVLVVGNPANTNA  140 (329)
T ss_dssp             HHT-------TTCSEEEECCCCCCCTT----CCHHHHHHHHHHHHHHHHHHHHHHS-------CTTCEEEECSSSHHHHH
T ss_pred             HHh-------CCCCEEEEeCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHhc-------CCCeEEEEccCchHHHH
Confidence            333       36899999999754321    1234567888888777777776552       13578999987653211


Q ss_pred             ccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhcc
Q 021391          177 YSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKE  218 (313)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~  218 (313)
                      .-..      .....++....|+.++.-...+...++..++-
T Consensus       141 ~~~~------~~~~~~p~~~v~g~t~Ld~~r~~~~la~~lgv  176 (329)
T 1b8p_A          141 YIAM------KSAPSLPAKNFTAMLRLDHNRALSQIAAKTGK  176 (329)
T ss_dssp             HHHH------HTCTTSCGGGEEECCHHHHHHHHHHHHHHHTC
T ss_pred             HHHH------HHcCCCCHHHEEEeecHHHHHHHHHHHHHhCc
Confidence            1000      00001224446788877667788888888763

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.51  E-value=2.5e-07  Score=87.61  Aligned_cols=83  Identities=17%  Similarity=0.234  Sum_probs=63.1

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHc-CCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALR-GVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFAS  100 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~  100 (313)
                      ....++++++++|+|| ||+|+++++.|++. |++|++++|+.++++++.+.       ..+..+.+|+++.+++.++++
T Consensus        16 ~~~~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~-------~~~~~~~~D~~d~~~l~~~l~   87 (467)
T 2axq_A           16 HIEGRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP-------SGSKAISLDVTDDSALDKVLA   87 (467)
T ss_dssp             -------CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG-------GTCEEEECCTTCHHHHHHHHH
T ss_pred             ccccCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh-------cCCcEEEEecCCHHHHHHHHc
Confidence            4567788999999998 99999999999998 78999999998776655432       135677899999988777665


Q ss_pred             HHhhcCCCeeEEEEcccCC
Q 021391          101 EYNSQGRPLNILINNAGIM  119 (313)
Q Consensus       101 ~~~~~~g~id~lv~~ag~~  119 (313)
                             ++|+||||++..
T Consensus        88 -------~~DvVIn~tp~~   99 (467)
T 2axq_A           88 -------DNDVVISLIPYT   99 (467)
T ss_dssp             -------TSSEEEECSCGG
T ss_pred             -------CCCEEEECCchh
Confidence                   689999999864

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.41  E-value=5.3e-07  Score=79.30  Aligned_cols=79  Identities=14%  Similarity=0.254  Sum_probs=59.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .++++||+++|+|+ ||+|+++++.|++.|++|++++|+.++++++.+++...  + .+  ...|+   +++       .
T Consensus       114 ~~~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~--~-~~--~~~~~---~~~-------~  177 (271)
T 1nyt_A          114 SFIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT--G-SI--QALSM---DEL-------E  177 (271)
T ss_dssp             TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG--S-SE--EECCS---GGG-------T
T ss_pred             CcCcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhcc--C-Ce--eEecH---HHh-------c
Confidence            45789999999998 69999999999999999999999998887776655321  1 22  22333   211       1


Q ss_pred             hcCCCeeEEEEcccCCC
Q 021391          104 SQGRPLNILINNAGIMA  120 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~  120 (313)
                      +  +.+|+||||+|...
T Consensus       178 ~--~~~DivVn~t~~~~  192 (271)
T 1nyt_A          178 G--HEFDLIINATSSGI  192 (271)
T ss_dssp             T--CCCSEEEECCSCGG
T ss_pred             c--CCCCEEEECCCCCC
Confidence            1  58999999998653

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.39  E-value=1.4e-06  Score=78.78  Aligned_cols=80  Identities=15%  Similarity=0.230  Sum_probs=59.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .|+++||+||+||||.++++.+...|++|++++|+.++.+.+. ++     +..   ..+|.++.+..+.+.+...  ..
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~-----g~~---~~~d~~~~~~~~~i~~~~~--~~  213 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-KL-----GCH---HTINYSTQDFAEVVREITG--GK  213 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH-----TCS---EEEETTTSCHHHHHHHHHT--TC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCC---EEEECCCHHHHHHHHHHhC--CC
Confidence            6899999999999999999999999999999999977665543 22     222   2347766655544444322  23


Q ss_pred             CeeEEEEcccC
Q 021391          108 PLNILINNAGI  118 (313)
Q Consensus       108 ~id~lv~~ag~  118 (313)
                      ++|++|+|+|.
T Consensus       214 ~~d~vi~~~g~  224 (333)
T 1wly_A          214 GVDVVYDSIGK  224 (333)
T ss_dssp             CEEEEEECSCT
T ss_pred             CCeEEEECCcH
Confidence            69999999984

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.39  E-value=5.7e-07  Score=81.66  Aligned_cols=80  Identities=14%  Similarity=0.187  Sum_probs=59.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .|+++||+||+||||.++++.+...|++|++++++.++.+.+.+++     +..   ..+|.++.+++.+.+.++..  +
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~-----g~~---~~~d~~~~~~~~~~~~~~~~--~  224 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF-----GFD---DAFNYKEESDLTAALKRCFP--N  224 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS-----CCS---EEEETTSCSCSHHHHHHHCT--T
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCc---eEEecCCHHHHHHHHHHHhC--C
Confidence            6899999999999999999999999999999999977665543222     222   23476665444445555432  5


Q ss_pred             CeeEEEEccc
Q 021391          108 PLNILINNAG  117 (313)
Q Consensus       108 ~id~lv~~ag  117 (313)
                      ++|++|+|+|
T Consensus       225 ~~d~vi~~~g  234 (345)
T 2j3h_A          225 GIDIYFENVG  234 (345)
T ss_dssp             CEEEEEESSC
T ss_pred             CCcEEEECCC
Confidence            7999999997

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.37  E-value=1.1e-06  Score=79.10  Aligned_cols=79  Identities=13%  Similarity=0.196  Sum_probs=58.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .|+++|||||++|||.++++.+...|++|++++++.++.+.+.+ +     +..   ..+|.++.+..+.+.+...  ..
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~-----g~~---~~~~~~~~~~~~~~~~~~~--~~  208 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A-----GAW---QVINYREEDLVERLKEITG--GK  208 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H-----TCS---EEEETTTSCHHHHHHHHTT--TC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c-----CCC---EEEECCCccHHHHHHHHhC--CC
Confidence            68999999999999999999999999999999999776655432 2     222   2347766655544444321  23


Q ss_pred             CeeEEEEccc
Q 021391          108 PLNILINNAG  117 (313)
Q Consensus       108 ~id~lv~~ag  117 (313)
                      ++|++|+|+|
T Consensus       209 ~~D~vi~~~g  218 (327)
T 1qor_A          209 KVRVVYDSVG  218 (327)
T ss_dssp             CEEEEEECSC
T ss_pred             CceEEEECCc
Confidence            6999999998

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.34  E-value=1.8e-06  Score=76.35  Aligned_cols=83  Identities=16%  Similarity=0.244  Sum_probs=63.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      ..+++||+++|+|+ ||+|++++..|++.|+ +|++++|+.++++++.+++...++...+  ...+..+   +.+.+.  
T Consensus       122 ~~~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i--~~~~~~~---l~~~l~--  193 (283)
T 3jyo_A          122 LPNAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAV--VGVDARG---IEDVIA--  193 (283)
T ss_dssp             CTTCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCE--EEECSTT---HHHHHH--
T ss_pred             CcCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceE--EEcCHHH---HHHHHh--
Confidence            35789999999998 7999999999999999 7999999999999988888766443333  3344433   333333  


Q ss_pred             hhcCCCeeEEEEcccCC
Q 021391          103 NSQGRPLNILINNAGIM  119 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~  119 (313)
                           ..|+|||+....
T Consensus       194 -----~~DiVInaTp~G  205 (283)
T 3jyo_A          194 -----AADGVVNATPMG  205 (283)
T ss_dssp             -----HSSEEEECSSTT
T ss_pred             -----cCCEEEECCCCC
Confidence                 469999998654

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.33  E-value=1.9e-06  Score=78.63  Aligned_cols=80  Identities=14%  Similarity=0.194  Sum_probs=58.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .|+++||+||+||||.++++.+...|++|++++++.++.+.+ +++     +..   ..+|.++.+.++.+.+..  ..+
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~~~~~~~~~~~--~~~  230 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL-----GAA---AGFNYKKEDFSEATLKFT--KGA  230 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH-----TCS---EEEETTTSCHHHHHHHHT--TTS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCc---EEEecCChHHHHHHHHHh--cCC
Confidence            689999999999999999999999999999999998776654 333     222   235666655444433321  123


Q ss_pred             CeeEEEEcccC
Q 021391          108 PLNILINNAGI  118 (313)
Q Consensus       108 ~id~lv~~ag~  118 (313)
                      ++|++|+|+|.
T Consensus       231 ~~d~vi~~~G~  241 (354)
T 2j8z_A          231 GVNLILDCIGG  241 (354)
T ss_dssp             CEEEEEESSCG
T ss_pred             CceEEEECCCc
Confidence            69999999983

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.32  E-value=6.3e-07  Score=70.26  Aligned_cols=77  Identities=14%  Similarity=0.074  Sum_probs=57.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      +++++++|+|+ |++|+.+++.|.+.|++|++++++.+..+...    .    ....++..|.++.+.+.++      ..
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~----~----~~~~~~~~d~~~~~~l~~~------~~   68 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----S----YATHAVIANATEENELLSL------GI   68 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT----T----TCSEEEECCTTCHHHHHTT------TG
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----H----hCCEEEEeCCCCHHHHHhc------CC
Confidence            56788999998 99999999999999999999999876544321    1    1245678899987654332      12


Q ss_pred             CCeeEEEEcccC
Q 021391          107 RPLNILINNAGI  118 (313)
Q Consensus       107 g~id~lv~~ag~  118 (313)
                      .+.|++|++++.
T Consensus        69 ~~~d~vi~~~~~   80 (144)
T 2hmt_A           69 RNFEYVIVAIGA   80 (144)
T ss_dssp             GGCSEEEECCCS
T ss_pred             CCCCEEEECCCC
Confidence            368999999873

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.32  E-value=1.2e-06  Score=79.17  Aligned_cols=80  Identities=15%  Similarity=0.295  Sum_probs=58.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      -.|+++||+||+||||.++++.+...|++|++++++.++.+.+.+++     +..   ..+|.++.+..+.+.+ ..  .
T Consensus       148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~-----g~~---~~~~~~~~~~~~~~~~-~~--~  216 (336)
T 4b7c_A          148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL-----GFD---GAIDYKNEDLAAGLKR-EC--P  216 (336)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT-----CCS---EEEETTTSCHHHHHHH-HC--T
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCC---EEEECCCHHHHHHHHH-hc--C
Confidence            36899999999999999999999999999999999987766553332     222   2346666543333333 22  3


Q ss_pred             CCeeEEEEccc
Q 021391          107 RPLNILINNAG  117 (313)
Q Consensus       107 g~id~lv~~ag  117 (313)
                      +++|++|+|+|
T Consensus       217 ~~~d~vi~~~g  227 (336)
T 4b7c_A          217 KGIDVFFDNVG  227 (336)
T ss_dssp             TCEEEEEESSC
T ss_pred             CCceEEEECCC
Confidence            47999999998

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.31  E-value=1.3e-06  Score=79.74  Aligned_cols=79  Identities=14%  Similarity=0.218  Sum_probs=57.3

Q ss_pred             CC--CEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           28 TG--LTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        28 ~g--k~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      .|  +++||+||+||||.++++.+...|+ +|++++++.++.+.+.+++     +..   ..+|.++.+..+. +.+...
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~-----g~~---~~~d~~~~~~~~~-~~~~~~  228 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL-----GFD---AAINYKKDNVAEQ-LRESCP  228 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS-----CCS---EEEETTTSCHHHH-HHHHCT
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc-----CCc---eEEecCchHHHHH-HHHhcC
Confidence            57  9999999999999999999999999 9999999977665543322     222   2357666443333 333222


Q ss_pred             cCCCeeEEEEccc
Q 021391          105 QGRPLNILINNAG  117 (313)
Q Consensus       105 ~~g~id~lv~~ag  117 (313)
                        +++|++|+|+|
T Consensus       229 --~~~d~vi~~~G  239 (357)
T 2zb4_A          229 --AGVDVYFDNVG  239 (357)
T ss_dssp             --TCEEEEEESCC
T ss_pred             --CCCCEEEECCC
Confidence              27999999998

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.29  E-value=2.5e-06  Score=77.38  Aligned_cols=79  Identities=16%  Similarity=0.293  Sum_probs=57.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .|+++||+||+||+|..+++.+...|++|++++++.++.+.+. ++     +...   .+|.++.+-.+. +.++. ..+
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~-----ga~~---~~d~~~~~~~~~-~~~~~-~~~  234 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL-----GADE---TVNYTHPDWPKE-VRRLT-GGK  234 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH-----TCSE---EEETTSTTHHHH-HHHHT-TTT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc-----CCCE---EEcCCcccHHHH-HHHHh-CCC
Confidence            6899999999999999999999999999999999987766543 22     2221   247666542222 23222 123


Q ss_pred             CeeEEEEccc
Q 021391          108 PLNILINNAG  117 (313)
Q Consensus       108 ~id~lv~~ag  117 (313)
                      ++|++|+++|
T Consensus       235 ~~d~vi~~~g  244 (343)
T 2eih_A          235 GADKVVDHTG  244 (343)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEECCC
Confidence            7999999998

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.29  E-value=2.5e-06  Score=66.98  Aligned_cols=75  Identities=17%  Similarity=0.187  Sum_probs=59.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .+++++|+|+ |.+|+++++.|.++|++|++++++++..+...+    .    ...++..|.++++.++++      ...
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~----~~~~~~gd~~~~~~l~~~------~~~   69 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----E----GFDAVIADPTDESFYRSL------DLE   69 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T----TCEEEECCTTCHHHHHHS------CCT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----C----CCcEEECCCCCHHHHHhC------Ccc
Confidence            4578999998 779999999999999999999999877665432    1    367889999998876543      224


Q ss_pred             CeeEEEEccc
Q 021391          108 PLNILINNAG  117 (313)
Q Consensus       108 ~id~lv~~ag  117 (313)
                      +.|++|.+.+
T Consensus        70 ~~d~vi~~~~   79 (141)
T 3llv_A           70 GVSAVLITGS   79 (141)
T ss_dssp             TCSEEEECCS
T ss_pred             cCCEEEEecC
Confidence            6899998875

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.26  E-value=3e-06  Score=77.22  Aligned_cols=79  Identities=18%  Similarity=0.267  Sum_probs=58.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .|+++||+||+||||.++++.+...|++|++++++.++.+.+ +++     +..   ..+|.++.+..+.+.+..  ..+
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~-----ga~---~~~d~~~~~~~~~~~~~~--~~~  238 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQN-----GAH---EVFNHREVNYIDKIKKYV--GEK  238 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT-----TCS---EEEETTSTTHHHHHHHHH--CTT
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHc-----CCC---EEEeCCCchHHHHHHHHc--CCC
Confidence            689999999999999999999999999999999998776632 222     222   235666655444443322  123


Q ss_pred             CeeEEEEccc
Q 021391          108 PLNILINNAG  117 (313)
Q Consensus       108 ~id~lv~~ag  117 (313)
                      ++|++|+|+|
T Consensus       239 ~~D~vi~~~G  248 (351)
T 1yb5_A          239 GIDIIIEMLA  248 (351)
T ss_dssp             CEEEEEESCH
T ss_pred             CcEEEEECCC
Confidence            7999999998

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.26  E-value=5.2e-06  Score=74.29  Aligned_cols=86  Identities=17%  Similarity=0.256  Sum_probs=64.7

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecC---chhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHH
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRN---MAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFA   99 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~   99 (313)
                      .++++||++||+|+ ||.|++++..|++.|+ +|+++.|+   .++++++.+++....+   ......++.+.+.....+
T Consensus       143 ~~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~---~~v~~~~~~~l~~~~~~l  218 (312)
T 3t4e_A          143 GFDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTD---CVVTVTDLADQHAFTEAL  218 (312)
T ss_dssp             TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSS---CEEEEEETTCHHHHHHHH
T ss_pred             CCCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccC---cceEEechHhhhhhHhhc
Confidence            56789999999998 8999999999999999 89999999   7888888888776532   223344555543333333


Q ss_pred             HHHhhcCCCeeEEEEcccCCC
Q 021391          100 SEYNSQGRPLNILINNAGIMA  120 (313)
Q Consensus       100 ~~~~~~~g~id~lv~~ag~~~  120 (313)
                      .       ..|+|||+.+...
T Consensus       219 ~-------~~DiIINaTp~Gm  232 (312)
T 3t4e_A          219 A-------SADILTNGTKVGM  232 (312)
T ss_dssp             H-------HCSEEEECSSTTS
T ss_pred             c-------CceEEEECCcCCC
Confidence            3       4699999986543

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.26  E-value=1.7e-06  Score=81.40  Aligned_cols=85  Identities=19%  Similarity=0.273  Sum_probs=59.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEE--ccCC---------CHHHH
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAME--LDVS---------SLASV   95 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~--~D~s---------~~~~v   95 (313)
                      -.|++|||+||+|+||.++++.+...|++|++++++.++.+.+ +++     +....+..  .|+.         +.+++
T Consensus       219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~-~~l-----Ga~~~i~~~~~~~~~~~~~~~~~~~~~~  292 (447)
T 4a0s_A          219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV-RAL-----GCDLVINRAELGITDDIADDPRRVVETG  292 (447)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT-----TCCCEEEHHHHTCCTTGGGCHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hhc-----CCCEEEecccccccccccccccccchhh
Confidence            3689999999999999999999999999999999887776644 222     22222211  1221         12344


Q ss_pred             HHHHHHHhhcCC-CeeEEEEccc
Q 021391           96 RKFASEYNSQGR-PLNILINNAG  117 (313)
Q Consensus        96 ~~~~~~~~~~~g-~id~lv~~ag  117 (313)
                      +.+.+++.+..+ ++|++|+|+|
T Consensus       293 ~~~~~~v~~~~g~g~Dvvid~~G  315 (447)
T 4a0s_A          293 RKLAKLVVEKAGREPDIVFEHTG  315 (447)
T ss_dssp             HHHHHHHHHHHSSCCSEEEECSC
T ss_pred             hHHHHHHHHHhCCCceEEEECCC
Confidence            555666655434 6999999998

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.21  E-value=1.2e-05  Score=72.49  Aligned_cols=120  Identities=16%  Similarity=0.121  Sum_probs=76.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC--CEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           30 LTAIVTGASSGIGTETARVLALRG--VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      ++++||||+|.+|..++..|+++|  ..|++.+++.+  +....++........+..    +++.++..++++       
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~----~~~t~d~~~al~-------   75 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVVRG----FLGQQQLEAALT-------   75 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEE----EESHHHHHHHHT-------
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceEEE----EeCCCCHHHHcC-------
Confidence            579999999999999999999998  68999998765  222333433211112222    223334444433       


Q ss_pred             CeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccc
Q 021391          108 PLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHR  174 (313)
Q Consensus       108 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~  174 (313)
                      ..|++|+++|....+. .   .....+..|+.....+++.+..+-        .++.|+++|.....
T Consensus        76 gaDvVi~~ag~~~~~g-~---~r~dl~~~N~~~~~~i~~~i~~~~--------p~~~viv~SNPv~~  130 (326)
T 1smk_A           76 GMDLIIVPAGVPRKPG-M---TRDDLFKINAGIVKTLCEGIAKCC--------PRAIVNLISNPVNS  130 (326)
T ss_dssp             TCSEEEECCCCCCCSS-C---CCSHHHHHHHHHHHHHHHHHHHHC--------TTSEEEECCSSHHH
T ss_pred             CCCEEEEcCCcCCCCC-C---CHHHHHHHHHHHHHHHHHHHHhhC--------CCeEEEEECCchHH
Confidence            6899999999754322 1   223457888888888877776542        24566665554443

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.20  E-value=5.5e-06  Score=75.28  Aligned_cols=80  Identities=16%  Similarity=0.217  Sum_probs=57.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHc-CCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALR-GVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      .|+++||+||++|||.++++.+... |++|++++++.++.+.+ +++     +..   ..+|.++.+..+.+ .++... 
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~~~~~~~-~~~~~~-  238 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-KRA-----GAD---YVINASMQDPLAEI-RRITES-  238 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-HHH-----TCS---EEEETTTSCHHHHH-HHHTTT-
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh-----CCC---EEecCCCccHHHHH-HHHhcC-
Confidence            6899999999999999999999999 99999999998776654 233     222   22466654433332 222211 


Q ss_pred             CCeeEEEEcccC
Q 021391          107 RPLNILINNAGI  118 (313)
Q Consensus       107 g~id~lv~~ag~  118 (313)
                      +++|++|+|+|.
T Consensus       239 ~~~d~vi~~~g~  250 (347)
T 1jvb_A          239 KGVDAVIDLNNS  250 (347)
T ss_dssp             SCEEEEEESCCC
T ss_pred             CCceEEEECCCC
Confidence            589999999984

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.15  E-value=3e-06  Score=77.60  Aligned_cols=76  Identities=20%  Similarity=0.253  Sum_probs=53.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc---hhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM---AAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      +++|+++||+|| |++|..+++.+...|++|++++++.   ++.+. .+++     +.  ..+  | .+ +-.+.+ .+ 
T Consensus       178 ~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~~~~-----ga--~~v--~-~~-~~~~~~-~~-  242 (366)
T 2cdc_A          178 TLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTV-IEET-----KT--NYY--N-SS-NGYDKL-KD-  242 (366)
T ss_dssp             SSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHH-HHHH-----TC--EEE--E-CT-TCSHHH-HH-
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHH-HHHh-----CC--cee--c-hH-HHHHHH-HH-
Confidence            345999999999 9999999999999999999999987   65533 2332     22  233  5 44 222222 22 


Q ss_pred             hhcCCCeeEEEEcccC
Q 021391          103 NSQGRPLNILINNAGI  118 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~  118 (313)
                      . . +++|++|+++|.
T Consensus       243 ~-~-~~~d~vid~~g~  256 (366)
T 2cdc_A          243 S-V-GKFDVIIDATGA  256 (366)
T ss_dssp             H-H-CCEEEEEECCCC
T ss_pred             h-C-CCCCEEEECCCC
Confidence            1 2 579999999985

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.13  E-value=1.1e-05  Score=73.57  Aligned_cols=79  Identities=20%  Similarity=0.342  Sum_probs=58.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .|+++||+||+|+||.++++.+...|++|++++++.++.+.+. ++     +...   .+|..+.+..+.+.+. .  .+
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~---~~~~~~~~~~~~~~~~-~--~~  234 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RL-----GAKR---GINYRSEDFAAVIKAE-T--GQ  234 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH-----TCSE---EEETTTSCHHHHHHHH-H--SS
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc-----CCCE---EEeCCchHHHHHHHHH-h--CC
Confidence            6899999999999999999999999999999999988766543 22     2221   2455555443333332 2  45


Q ss_pred             CeeEEEEcccC
Q 021391          108 PLNILINNAGI  118 (313)
Q Consensus       108 ~id~lv~~ag~  118 (313)
                      ++|++|+|+|.
T Consensus       235 g~Dvvid~~g~  245 (353)
T 4dup_A          235 GVDIILDMIGA  245 (353)
T ss_dssp             CEEEEEESCCG
T ss_pred             CceEEEECCCH
Confidence            79999999983

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.13  E-value=7.4e-06  Score=75.04  Aligned_cols=83  Identities=17%  Similarity=0.226  Sum_probs=59.8

Q ss_pred             chhccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHH
Q 021391           19 EEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKF   98 (313)
Q Consensus        19 ~~~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~   98 (313)
                      .-++..|.-+.++|+|.|| |++|+.+++.|++ .+.|.+++++.++++.+         ...+..+.+|++|.+++.++
T Consensus         6 ~~~~~~~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~---------~~~~~~~~~d~~d~~~l~~~   74 (365)
T 3abi_A            6 HHHHHHIEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKV---------KEFATPLKVDASNFDKLVEV   74 (365)
T ss_dssp             ----------CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHH---------TTTSEEEECCTTCHHHHHHH
T ss_pred             ccccccccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHH---------hccCCcEEEecCCHHHHHHH
Confidence            3455667777778999998 9999999998875 57999999998776643         22456789999999988887


Q ss_pred             HHHHhhcCCCeeEEEEcccCC
Q 021391           99 ASEYNSQGRPLNILINNAGIM  119 (313)
Q Consensus        99 ~~~~~~~~g~id~lv~~ag~~  119 (313)
                      ++       ..|+||++++..
T Consensus        75 ~~-------~~DvVi~~~p~~   88 (365)
T 3abi_A           75 MK-------EFELVIGALPGF   88 (365)
T ss_dssp             HT-------TCSEEEECCCGG
T ss_pred             Hh-------CCCEEEEecCCc
Confidence            76       579999998753

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=98.10  E-value=4.6e-06  Score=73.32  Aligned_cols=79  Identities=15%  Similarity=0.220  Sum_probs=58.4

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      ..++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++...  + .+..  .|+   +++       .
T Consensus       114 ~~~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~--~-~~~~--~~~---~~~-------~  177 (272)
T 1p77_A          114 NWLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY--G-NIQA--VSM---DSI-------P  177 (272)
T ss_dssp             TCCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG--S-CEEE--EEG---GGC-------C
T ss_pred             CCCcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcccc--C-CeEE--eeH---HHh-------c
Confidence            45789999999998 79999999999999999999999998888877766332  1 2222  232   111       0


Q ss_pred             hcCCCeeEEEEcccCCC
Q 021391          104 SQGRPLNILINNAGIMA  120 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~  120 (313)
                       . +..|+|||+++...
T Consensus       178 -~-~~~DivIn~t~~~~  192 (272)
T 1p77_A          178 -L-QTYDLVINATSAGL  192 (272)
T ss_dssp             -C-SCCSEEEECCCC--
T ss_pred             -c-CCCCEEEECCCCCC
Confidence             1 47999999998653

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=98.08  E-value=3e-05  Score=70.44  Aligned_cols=79  Identities=13%  Similarity=0.072  Sum_probs=55.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      ++++||+||+|+||..+++.+...|++|++++++.++.+.+. ++     +...   ..|..+.+-.+.+.+....  .+
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~-----Ga~~---~~~~~~~~~~~~v~~~~~~--~g  233 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DI-----GAAH---VLNEKAPDFEATLREVMKA--EQ  233 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HH-----TCSE---EEETTSTTHHHHHHHHHHH--HC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCCE---EEECCcHHHHHHHHHHhcC--CC
Confidence            389999999999999999999999999999999988766543 33     2221   2344444333333222211  27


Q ss_pred             eeEEEEcccC
Q 021391          109 LNILINNAGI  118 (313)
Q Consensus       109 id~lv~~ag~  118 (313)
                      +|++|+|+|.
T Consensus       234 ~D~vid~~g~  243 (349)
T 3pi7_A          234 PRIFLDAVTG  243 (349)
T ss_dssp             CCEEEESSCH
T ss_pred             CcEEEECCCC
Confidence            9999999983

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.08  E-value=2.8e-05  Score=69.69  Aligned_cols=156  Identities=15%  Similarity=0.160  Sum_probs=93.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--EEEEEec--CchhHHHHHHHHHHhCC--CCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           31 TAIVTGASSGIGTETARVLALRGV--HVIMAVR--NMAAGKDVREAIVKEIP--SAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G~--~V~l~~r--~~~~~~~~~~~l~~~~~--~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      +++||||+|.+|.+++..|+..|.  .+.+.++  +.++++.....+....+  +..+.+...|  |  ++.       +
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~--d--~l~-------~   70 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES--D--ENL-------R   70 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE--T--TCG-------G
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC--c--chH-------H
Confidence            689999999999999999999885  6888998  66545543444433211  1122222211  0  111       1


Q ss_pred             cCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCC
Q 021391          105 QGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFD  184 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  184 (313)
                      .+.+.|++||+||....+.    ......+..|+.....+++++..+        . ++.|+++|........-      
T Consensus        71 al~gaD~Vi~~Ag~~~~~g----~~r~dl~~~N~~i~~~i~~~i~~~--------~-~~~vlv~SNPv~~~t~~------  131 (313)
T 1hye_A           71 IIDESDVVIITSGVPRKEG----MSRMDLAKTNAKIVGKYAKKIAEI--------C-DTKIFVITNPVDVMTYK------  131 (313)
T ss_dssp             GGTTCSEEEECCSCCCCTT----CCHHHHHHHHHHHHHHHHHHHHHH--------C-CCEEEECSSSHHHHHHH------
T ss_pred             HhCCCCEEEECCCCCCCCC----CcHHHHHHHHHHHHHHHHHHHHHh--------C-CeEEEEecCcHHHHHHH------
Confidence            2337899999999754322    123456888988888888887665        3 35666666554422110      


Q ss_pred             CCCCCCCCCccccchH-hHHHHHHHHHHHHHHhc
Q 021391          185 KINDESAYNSFGAYGQ-SKLANILHAKELAKHLK  217 (313)
Q Consensus       185 ~~~~~~~~~~~~~Y~a-sK~a~~~l~~~la~e~~  217 (313)
                       +....+++....++. +..-...+...+|..++
T Consensus       132 -~~k~~~~p~~rviG~gt~LD~~r~~~~la~~lg  164 (313)
T 1hye_A          132 -ALVDSKFERNQVFGLGTHLDSLRFKVAIAKFFG  164 (313)
T ss_dssp             -HHHHHCCCTTSEEECTTHHHHHHHHHHHHHHHT
T ss_pred             -HHHhhCcChhcEEEeCccHHHHHHHHHHHHHhC
Confidence             000011224455666 56556677777887775

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=98.07  E-value=1.4e-05  Score=75.44  Aligned_cols=85  Identities=16%  Similarity=0.251  Sum_probs=61.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEE--cc--------CCCHHHHH
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAME--LD--------VSSLASVR   96 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~--~D--------~s~~~~v~   96 (313)
                      -.|++|||+||+|++|...+..+...|++|++++++.++.+.+ +++     +....+-.  .|        .++.++.+
T Consensus       227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~l-----Ga~~vi~~~~~d~~~~~~~~~~~~~~~~  300 (456)
T 3krt_A          227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAM-----GAEAIIDRNAEGYRFWKDENTQDPKEWK  300 (456)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHH-----TCCEEEETTTTTCCSEEETTEECHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-Hhh-----CCcEEEecCcCcccccccccccchHHHH
Confidence            3689999999999999999999999999999999887776644 333     22221111  11        24556666


Q ss_pred             HHHHHHhhcC--CCeeEEEEccc
Q 021391           97 KFASEYNSQG--RPLNILINNAG  117 (313)
Q Consensus        97 ~~~~~~~~~~--g~id~lv~~ag  117 (313)
                      ++.+++.+..  .++|++|.++|
T Consensus       301 ~~~~~i~~~t~g~g~Dvvid~~G  323 (456)
T 3krt_A          301 RFGKRIRELTGGEDIDIVFEHPG  323 (456)
T ss_dssp             HHHHHHHHHHTSCCEEEEEECSC
T ss_pred             HHHHHHHHHhCCCCCcEEEEcCC
Confidence            7777776643  37999999998

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=98.05  E-value=1.2e-05  Score=73.58  Aligned_cols=78  Identities=14%  Similarity=0.211  Sum_probs=55.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .|+++||+||+|++|..+++.+...|++|++++++.++.+.+.+ +     +...   .+|..+.+ +.+.+.+..  .+
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~-----Ga~~---~~~~~~~~-~~~~~~~~~--~~  230 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-L-----GCDR---PINYKTEP-VGTVLKQEY--PE  230 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-T-----TCSE---EEETTTSC-HHHHHHHHC--TT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-c-----CCcE---EEecCChh-HHHHHHHhc--CC
Confidence            68999999999999999999999999999999998776654332 2     2221   23444432 223333321  24


Q ss_pred             CeeEEEEccc
Q 021391          108 PLNILINNAG  117 (313)
Q Consensus       108 ~id~lv~~ag  117 (313)
                      ++|++|+|+|
T Consensus       231 g~D~vid~~g  240 (362)
T 2c0c_A          231 GVDVVYESVG  240 (362)
T ss_dssp             CEEEEEECSC
T ss_pred             CCCEEEECCC
Confidence            7999999998

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.04  E-value=2.8e-05  Score=61.92  Aligned_cols=78  Identities=17%  Similarity=0.115  Sum_probs=58.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc-hhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM-AAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      ..+.++|.|+ |.+|+.+++.|.+.|++|++++++. +..+...+..     ...+.++..|.++++.+.++      ..
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-----~~~~~~i~gd~~~~~~l~~a------~i   69 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-----GDNADVIPGDSNDSSVLKKA------GI   69 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-----CTTCEEEESCTTSHHHHHHH------TT
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-----cCCCeEEEcCCCCHHHHHHc------Ch
Confidence            4577889986 9999999999999999999999974 4444433221     23478899999998865443      12


Q ss_pred             CCeeEEEEccc
Q 021391          107 RPLNILINNAG  117 (313)
Q Consensus       107 g~id~lv~~ag  117 (313)
                      .+.|.+|.+.+
T Consensus        70 ~~ad~vi~~~~   80 (153)
T 1id1_A           70 DRCRAILALSD   80 (153)
T ss_dssp             TTCSEEEECSS
T ss_pred             hhCCEEEEecC
Confidence            36789998875

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=98.02  E-value=2e-05  Score=70.89  Aligned_cols=80  Identities=16%  Similarity=0.250  Sum_probs=57.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .|+++||+||+|++|.++++.+...|++|++++++.++.+.+. ++     +..   ...|.++.+..+.+.+..  ...
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~-----Ga~---~~~~~~~~~~~~~~~~~~--~~~  208 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-AL-----GAW---ETIDYSHEDVAKRVLELT--DGK  208 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH-----TCS---EEEETTTSCHHHHHHHHT--TTC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCC---EEEeCCCccHHHHHHHHh--CCC
Confidence            6899999999999999999999999999999999987766443 22     222   224555544333333321  123


Q ss_pred             CeeEEEEcccC
Q 021391          108 PLNILINNAGI  118 (313)
Q Consensus       108 ~id~lv~~ag~  118 (313)
                      ++|++|+|+|.
T Consensus       209 g~Dvvid~~g~  219 (325)
T 3jyn_A          209 KCPVVYDGVGQ  219 (325)
T ss_dssp             CEEEEEESSCG
T ss_pred             CceEEEECCCh
Confidence            79999999984

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=98.01  E-value=2e-05  Score=71.28  Aligned_cols=81  Identities=17%  Similarity=0.203  Sum_probs=57.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      -.|+++||+||+++||..+++.+...|++|++++++.++.+.+.+ +     +...   .+|..+.+..+.+.+ .. ..
T Consensus       143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l-----ga~~---~~~~~~~~~~~~~~~-~~-~~  211 (340)
T 3gms_A          143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-L-----GAAY---VIDTSTAPLYETVME-LT-NG  211 (340)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H-----TCSE---EEETTTSCHHHHHHH-HT-TT
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-C-----CCcE---EEeCCcccHHHHHHH-Hh-CC
Confidence            368999999999999999999999999999999999887765433 3     2222   235555443333322 21 12


Q ss_pred             CCeeEEEEcccC
Q 021391          107 RPLNILINNAGI  118 (313)
Q Consensus       107 g~id~lv~~ag~  118 (313)
                      .++|++|+|+|.
T Consensus       212 ~g~Dvvid~~g~  223 (340)
T 3gms_A          212 IGADAAIDSIGG  223 (340)
T ss_dssp             SCEEEEEESSCH
T ss_pred             CCCcEEEECCCC
Confidence            379999999984

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=98.01  E-value=1.7e-05  Score=71.85  Aligned_cols=77  Identities=12%  Similarity=0.092  Sum_probs=55.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .|+++||+|| |++|..+++.+...|++|++++++.++.+.+. ++     +..   ..+|.++.+-.+. +.++.   +
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~---~~~d~~~~~~~~~-~~~~~---~  229 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-EL-----GAD---LVVNPLKEDAAKF-MKEKV---G  229 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HT-----TCS---EEECTTTSCHHHH-HHHHH---S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HC-----CCC---EEecCCCccHHHH-HHHHh---C
Confidence            6899999999 88999999999999999999999987766442 22     222   2356665432222 23222   5


Q ss_pred             CeeEEEEcccC
Q 021391          108 PLNILINNAGI  118 (313)
Q Consensus       108 ~id~lv~~ag~  118 (313)
                      ++|++|+++|.
T Consensus       230 ~~d~vid~~g~  240 (339)
T 1rjw_A          230 GVHAAVVTAVS  240 (339)
T ss_dssp             SEEEEEESSCC
T ss_pred             CCCEEEECCCC
Confidence            79999999984

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.98  E-value=1.1e-05  Score=71.70  Aligned_cols=79  Identities=20%  Similarity=0.178  Sum_probs=57.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      +++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++++++.+++....   . ..+     +.+++       .
T Consensus       137 ~~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~---~-~~~-----~~~~~-------~  199 (297)
T 2egg_A          137 ITLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERR---S-AYF-----SLAEA-------E  199 (297)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSS---C-CEE-----CHHHH-------H
T ss_pred             CCCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhcc---C-cee-----eHHHH-------H
Confidence            5788999999998 7999999999999998 99999999888777665542110   0 111     22222       2


Q ss_pred             hcCCCeeEEEEcccCCC
Q 021391          104 SQGRPLNILINNAGIMA  120 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~  120 (313)
                      +.....|+|||+.+...
T Consensus       200 ~~~~~aDivIn~t~~~~  216 (297)
T 2egg_A          200 TRLAEYDIIINTTSVGM  216 (297)
T ss_dssp             HTGGGCSEEEECSCTTC
T ss_pred             hhhccCCEEEECCCCCC
Confidence            22346899999998654

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.97  E-value=3e-05  Score=67.20  Aligned_cols=82  Identities=13%  Similarity=0.278  Sum_probs=66.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCc-------------------hhHHHHHHHHHHhCCCCceEEEE
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNM-------------------AAGKDVREAIVKEIPSAKVDAME   86 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~   86 (313)
                      +++++|+|.|+ ||+|..+++.|+..|. +|.+++++.                   .+.+.+.+.+...+|..++..+.
T Consensus        29 l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~  107 (249)
T 1jw9_B           29 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN  107 (249)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEe
Confidence            56799999996 6999999999999998 899999998                   78888888888877777777777


Q ss_pred             ccCCCHHHHHHHHHHHhhcCCCeeEEEEccc
Q 021391           87 LDVSSLASVRKFASEYNSQGRPLNILINNAG  117 (313)
Q Consensus        87 ~D~s~~~~v~~~~~~~~~~~g~id~lv~~ag  117 (313)
                      .++++ +.+..+++       ..|+||.+..
T Consensus       108 ~~~~~-~~~~~~~~-------~~DvVi~~~d  130 (249)
T 1jw9_B          108 ALLDD-AELAALIA-------EHDLVLDCTD  130 (249)
T ss_dssp             SCCCH-HHHHHHHH-------TSSEEEECCS
T ss_pred             ccCCH-hHHHHHHh-------CCCEEEEeCC
Confidence            77764 34444443       6899999874

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.96  E-value=3.1e-05  Score=60.08  Aligned_cols=75  Identities=17%  Similarity=0.289  Sum_probs=55.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      +++++|+|+ |.+|..+++.|.+.|++|++++|+.+..+...+    ..   ...++..|.++.+.+...      ....
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~----~~---~~~~~~~d~~~~~~l~~~------~~~~   69 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASA----EI---DALVINGDCTKIKTLEDA------GIED   69 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HC---SSEEEESCTTSHHHHHHT------TTTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH----hc---CcEEEEcCCCCHHHHHHc------Cccc
Confidence            468999987 999999999999999999999998766554332    21   345678899887654321      1246


Q ss_pred             eeEEEEccc
Q 021391          109 LNILINNAG  117 (313)
Q Consensus       109 id~lv~~ag  117 (313)
                      .|++|.+.+
T Consensus        70 ~d~vi~~~~   78 (140)
T 1lss_A           70 ADMYIAVTG   78 (140)
T ss_dssp             CSEEEECCS
T ss_pred             CCEEEEeeC
Confidence            899999974

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.95  E-value=2.5e-05  Score=70.78  Aligned_cols=79  Identities=27%  Similarity=0.361  Sum_probs=54.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .|+++||+||+|+||.++++.+...|++|++++++.++.+.+. ++     +.. ..+  |.. . ++.+.+.+.. ...
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~-----ga~-~v~--~~~-~-~~~~~v~~~~-~~~  226 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK-SV-----GAD-IVL--PLE-E-GWAKAVREAT-GGA  226 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HH-----TCS-EEE--ESS-T-THHHHHHHHT-TTS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc-----CCc-EEe--cCc-h-hHHHHHHHHh-CCC
Confidence            6899999999999999999999999999999999888775443 23     222 222  333 2 2222222221 112


Q ss_pred             CeeEEEEcccC
Q 021391          108 PLNILINNAGI  118 (313)
Q Consensus       108 ~id~lv~~ag~  118 (313)
                      ++|++|+|+|.
T Consensus       227 g~Dvvid~~g~  237 (342)
T 4eye_A          227 GVDMVVDPIGG  237 (342)
T ss_dssp             CEEEEEESCC-
T ss_pred             CceEEEECCch
Confidence            69999999984

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.93  E-value=1.7e-05  Score=71.50  Aligned_cols=81  Identities=17%  Similarity=0.254  Sum_probs=56.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      -.|+++||+||+|+||.++++.+...|++|++++++.++.+.+ +++     +..   ..+|..+.+..+.+.+..  ..
T Consensus       147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~-----ga~---~~~~~~~~~~~~~~~~~~--~~  215 (334)
T 3qwb_A          147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-KEY-----GAE---YLINASKEDILRQVLKFT--NG  215 (334)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT-----TCS---EEEETTTSCHHHHHHHHT--TT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc-----CCc---EEEeCCCchHHHHHHHHh--CC
Confidence            3789999999999999999999999999999999988776633 222     222   223555544333332221  12


Q ss_pred             CCeeEEEEcccC
Q 021391          107 RPLNILINNAGI  118 (313)
Q Consensus       107 g~id~lv~~ag~  118 (313)
                      .++|++|+|+|.
T Consensus       216 ~g~D~vid~~g~  227 (334)
T 3qwb_A          216 KGVDASFDSVGK  227 (334)
T ss_dssp             SCEEEEEECCGG
T ss_pred             CCceEEEECCCh
Confidence            369999999984

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.91  E-value=6.1e-05  Score=66.37  Aligned_cols=77  Identities=18%  Similarity=0.268  Sum_probs=59.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      .++++||+++|+|+ ||+|++++..|++.|+ +|+++.|+.++.+++.+++....   .+.....+  +.          
T Consensus       121 ~~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~---~~~~~~~~--~l----------  184 (281)
T 3o8q_A          121 QVLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG---EVKAQAFE--QL----------  184 (281)
T ss_dssp             TCCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS---CEEEEEGG--GC----------
T ss_pred             CCCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC---CeeEeeHH--Hh----------
Confidence            56789999999998 6999999999999997 99999999999888887775431   23333221  11          


Q ss_pred             hhcCCCeeEEEEcccCC
Q 021391          103 NSQGRPLNILINNAGIM  119 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~  119 (313)
                         ....|+|||+.+..
T Consensus       185 ---~~~aDiIInaTp~g  198 (281)
T 3o8q_A          185 ---KQSYDVIINSTSAS  198 (281)
T ss_dssp             ---CSCEEEEEECSCCC
T ss_pred             ---cCCCCEEEEcCcCC
Confidence               03689999998654

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.90  E-value=0.00012  Score=65.26  Aligned_cols=118  Identities=14%  Similarity=0.079  Sum_probs=74.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--EEEEEec--CchhHHHHHHHHHHhCC-CCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           30 LTAIVTGASSGIGTETARVLALRGV--HVIMAVR--NMAAGKDVREAIVKEIP-SAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~--~V~l~~r--~~~~~~~~~~~l~~~~~-~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      ++++||||+|.+|.+++..|+..|.  .+++.++  +.++++....++..... ...+.+.. +  +.+.          
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~a----------   67 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYED----------   67 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGGG----------
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHHH----------
Confidence            3699999999999999999999885  6899998  77665544445544311 11223322 2  2111          


Q ss_pred             cCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          105 QGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                       +...|++||++|....+. .   .-...+..|+.....+++.+..+        ..++.|+++|....
T Consensus        68 -~~~aDvVi~~ag~~~~~g-~---~r~dl~~~N~~i~~~i~~~i~~~--------~p~~~viv~SNPv~  123 (303)
T 1o6z_A           68 -TAGSDVVVITAGIPRQPG-Q---TRIDLAGDNAPIMEDIQSSLDEH--------NDDYISLTTSNPVD  123 (303)
T ss_dssp             -GTTCSEEEECCCCCCCTT-C---CHHHHHHHHHHHHHHHHHHHHTT--------CSCCEEEECCSSHH
T ss_pred             -hCCCCEEEEcCCCCCCCC-C---CHHHHHHHHHHHHHHHHHHHHHH--------CCCcEEEEeCChHH
Confidence             237899999999754332 1   22345778888777777666543        23556666555443

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.88  E-value=3.7e-05  Score=67.44  Aligned_cols=77  Identities=17%  Similarity=0.268  Sum_probs=57.8

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      ..+++||+++|+|+ ||+|++++..|++.|+ +|++++|+.++++++.+++..    ..+..+  ++.+..         
T Consensus       115 ~~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~----~~~~~~--~~~~l~---------  178 (272)
T 3pwz_A          115 GEPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH----SRLRIS--RYEALE---------  178 (272)
T ss_dssp             CCCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC----TTEEEE--CSGGGT---------
T ss_pred             CCCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc----CCeeEe--eHHHhc---------
Confidence            46789999999998 6999999999999997 999999999888887776532    123333  222211         


Q ss_pred             hhcCCCeeEEEEcccCC
Q 021391          103 NSQGRPLNILINNAGIM  119 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~  119 (313)
                       .  ...|+|||+.+..
T Consensus       179 -~--~~~DivInaTp~g  192 (272)
T 3pwz_A          179 -G--QSFDIVVNATSAS  192 (272)
T ss_dssp             -T--CCCSEEEECSSGG
T ss_pred             -c--cCCCEEEECCCCC
Confidence             1  3689999997643

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.86  E-value=2.6e-05  Score=71.34  Aligned_cols=75  Identities=13%  Similarity=0.185  Sum_probs=55.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .|+++||+|+ |+||..+++.+...|++|++++++.++.+.+.+++     +..   ..+|..+.+.+.       +..+
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l-----Ga~---~v~~~~~~~~~~-------~~~~  250 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF-----GAD---SFLVSRDQEQMQ-------AAAG  250 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS-----CCS---EEEETTCHHHHH-------HTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----CCc---eEEeccCHHHHH-------HhhC
Confidence            7999999996 99999999999999999999999987766544332     222   124666654332       2235


Q ss_pred             CeeEEEEcccC
Q 021391          108 PLNILINNAGI  118 (313)
Q Consensus       108 ~id~lv~~ag~  118 (313)
                      ++|++|+++|.
T Consensus       251 ~~D~vid~~g~  261 (366)
T 1yqd_A          251 TLDGIIDTVSA  261 (366)
T ss_dssp             CEEEEEECCSS
T ss_pred             CCCEEEECCCc
Confidence            79999999985

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.81  E-value=3.2e-05  Score=61.70  Aligned_cols=82  Identities=10%  Similarity=0.099  Sum_probs=57.5

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      .+..+..+++++|.|+ |.+|..+++.|.+.|++|++++|+.+..+.+.+       ......+..|.++.+.+..+   
T Consensus        12 ~~~~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~-------~~g~~~~~~d~~~~~~l~~~---   80 (155)
T 2g1u_A           12 HMSKKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS-------EFSGFTVVGDAAEFETLKEC---   80 (155)
T ss_dssp             -----CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT-------TCCSEEEESCTTSHHHHHTT---
T ss_pred             hhhcccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh-------cCCCcEEEecCCCHHHHHHc---
Confidence            3455678899999996 999999999999999999999999877553210       11345677888886543321   


Q ss_pred             HhhcCCCeeEEEEccc
Q 021391          102 YNSQGRPLNILINNAG  117 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag  117 (313)
                         ...+.|++|.+.+
T Consensus        81 ---~~~~ad~Vi~~~~   93 (155)
T 2g1u_A           81 ---GMEKADMVFAFTN   93 (155)
T ss_dssp             ---TGGGCSEEEECSS
T ss_pred             ---CcccCCEEEEEeC
Confidence               1236899999886

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.81  E-value=0.00015  Score=64.11  Aligned_cols=89  Identities=12%  Similarity=0.352  Sum_probs=73.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCc------------------hhHHHHHHHHHHhCCCCceEEEEc
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNM------------------AAGKDVREAIVKEIPSAKVDAMEL   87 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~------------------~~~~~~~~~l~~~~~~~~~~~~~~   87 (313)
                      +++++|+|.|+ ||+|..+++.|+..|. ++.++|.+.                  .+.+.+.+.+.+.+|..++..+..
T Consensus        34 L~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~  112 (292)
T 3h8v_A           34 IRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNY  112 (292)
T ss_dssp             GGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECC
T ss_pred             HhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecc
Confidence            56789999986 6999999999999998 899999876                  778888888888888888999999


Q ss_pred             cCCCHHHHHHHHHHHhhc----CCCeeEEEEcc
Q 021391           88 DVSSLASVRKFASEYNSQ----GRPLNILINNA  116 (313)
Q Consensus        88 D~s~~~~v~~~~~~~~~~----~g~id~lv~~a  116 (313)
                      ++++.+.++.+++.+...    ....|+||.+.
T Consensus       113 ~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~  145 (292)
T 3h8v_A          113 NITTVENFQHFMDRISNGGLEEGKPVDLVLSCV  145 (292)
T ss_dssp             CTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECC
T ss_pred             cCCcHHHHHHHhhhhcccccccCCCCCEEEECC
Confidence            999877777777655321    13689999877

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.75  E-value=9.2e-05  Score=67.65  Aligned_cols=78  Identities=17%  Similarity=0.146  Sum_probs=56.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      .+++++++|+|+ ||+|+++++.+...|++|++++|+.++++.+.+...     ..+..   +..+.+++.+.+.     
T Consensus       164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~-----  229 (361)
T 1pjc_A          164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG-----SRVEL---LYSNSAEIETAVA-----  229 (361)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-----GGSEE---EECCHHHHHHHHH-----
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhC-----ceeEe---eeCCHHHHHHHHc-----
Confidence            367799999999 999999999999999999999999888776554321     12222   2233444433332     


Q ss_pred             CCCeeEEEEcccCC
Q 021391          106 GRPLNILINNAGIM  119 (313)
Q Consensus       106 ~g~id~lv~~ag~~  119 (313)
                        ..|++|++++..
T Consensus       230 --~~DvVI~~~~~~  241 (361)
T 1pjc_A          230 --EADLLIGAVLVP  241 (361)
T ss_dssp             --TCSEEEECCCCT
T ss_pred             --CCCEEEECCCcC
Confidence              689999999864

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.72  E-value=0.00061  Score=60.95  Aligned_cols=119  Identities=18%  Similarity=0.150  Sum_probs=73.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC--CEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           31 TAIVTGASSGIGTETARVLALRG--VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      ++.|+||+|.+|..++..|+..|  ..|++.+++.  .+....++.......++....    ..++.+.+++       .
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~----~t~d~~~a~~-------~   68 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYL----GPEQLPDCLK-------G   68 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEE----SGGGHHHHHT-------T
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEec----CCCCHHHHhC-------C
Confidence            68999999999999999999988  6899999987  333334443321111122210    0122333333       6


Q ss_pred             eeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccc
Q 021391          109 LNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHR  174 (313)
Q Consensus       109 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~  174 (313)
                      .|++|+++|....+. .+.   ...+..|+.....+.+.+.++        ..++.||++|-....
T Consensus        69 aDvVvi~ag~~~~~g-~~r---~dl~~~n~~i~~~i~~~i~~~--------~p~a~viv~sNPv~~  122 (314)
T 1mld_A           69 CDVVVIPAGVPRKPG-MTR---DDLFNTNATIVATLTAACAQH--------CPDAMICIISNPVNS  122 (314)
T ss_dssp             CSEEEECCSCCCCTT-CCG---GGGHHHHHHHHHHHHHHHHHH--------CTTSEEEECSSCHHH
T ss_pred             CCEEEECCCcCCCCC-CcH---HHHHHHHHHHHHHHHHHHHhh--------CCCeEEEEECCCcch
Confidence            899999999764432 122   234566666655555555443        336789988776553

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.71  E-value=0.00018  Score=65.09  Aligned_cols=78  Identities=13%  Similarity=0.184  Sum_probs=55.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .|+++||+||+|++|..+++.+...|++|++++++.++.+.+.+ +     +...   .+|..+  +..+.+.+.  ..+
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~~---vi~~~~--~~~~~~~~~--~~~  216 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-M-----GADI---VLNHKE--SLLNQFKTQ--GIE  216 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-H-----TCSE---EECTTS--CHHHHHHHH--TCC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c-----CCcE---EEECCc--cHHHHHHHh--CCC
Confidence            69999999999999999999999999999999998877655432 3     2221   223333  222223333  234


Q ss_pred             CeeEEEEcccC
Q 021391          108 PLNILINNAGI  118 (313)
Q Consensus       108 ~id~lv~~ag~  118 (313)
                      ++|++|+|+|.
T Consensus       217 g~Dvv~d~~g~  227 (346)
T 3fbg_A          217 LVDYVFCTFNT  227 (346)
T ss_dssp             CEEEEEESSCH
T ss_pred             CccEEEECCCc
Confidence            79999999973

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.70  E-value=0.00011  Score=67.52  Aligned_cols=78  Identities=15%  Similarity=0.161  Sum_probs=58.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      .+.|++++|+|+ |+||+++++.+...|++|++++|+.++++.+.+.+     +..+   .++.++..++.+++.     
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~-----g~~~---~~~~~~~~~l~~~l~-----  230 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF-----CGRI---HTRYSSAYELEGAVK-----  230 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----TTSS---EEEECCHHHHHHHHH-----
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc-----CCee---EeccCCHHHHHHHHc-----
Confidence            578999999998 99999999999999999999999987766544322     2222   233445555555443     


Q ss_pred             CCCeeEEEEcccCC
Q 021391          106 GRPLNILINNAGIM  119 (313)
Q Consensus       106 ~g~id~lv~~ag~~  119 (313)
                        ..|++|++++..
T Consensus       231 --~aDvVi~~~~~p  242 (377)
T 2vhw_A          231 --RADLVIGAVLVP  242 (377)
T ss_dssp             --HCSEEEECCCCT
T ss_pred             --CCCEEEECCCcC
Confidence              579999998753

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.69  E-value=0.00014  Score=65.91  Aligned_cols=103  Identities=17%  Similarity=0.203  Sum_probs=68.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      .|+++||+|| |++|..+++.+...|+ +|++++++.++.+.+. ++     +..   ...|..+.+ +.+.+.++. ..
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~-----Ga~---~~~~~~~~~-~~~~v~~~~-~g  234 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KV-----GAD---YVINPFEED-VVKEVMDIT-DG  234 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HH-----TCS---EEECTTTSC-HHHHHHHHT-TT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-----CCC---EEECCCCcC-HHHHHHHHc-CC
Confidence            8999999999 9999999999999999 8999999877655432 33     221   123554433 222222221 11


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                      .++|++|+++|..                       ..++.+++.+.+       +|+++.+++..
T Consensus       235 ~g~D~vid~~g~~-----------------------~~~~~~~~~l~~-------~G~iv~~g~~~  270 (348)
T 2d8a_A          235 NGVDVFLEFSGAP-----------------------KALEQGLQAVTP-------AGRVSLLGLYP  270 (348)
T ss_dssp             SCEEEEEECSCCH-----------------------HHHHHHHHHEEE-------EEEEEECCCCS
T ss_pred             CCCCEEEECCCCH-----------------------HHHHHHHHHHhc-------CCEEEEEccCC
Confidence            2699999999831                       123444455544       78999998754

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.68  E-value=9.5e-05  Score=65.64  Aligned_cols=74  Identities=18%  Similarity=0.193  Sum_probs=54.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCC-HHHHHHHHHHHhhc
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSS-LASVRKFASEYNSQ  105 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~-~~~v~~~~~~~~~~  105 (313)
                      -.|+++||+||+|++|..+++.+...|++|+.++++.++.+.+. ++     +...   ..|..+ .+    +.+++   
T Consensus       124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~-----ga~~---~~~~~~~~~----~~~~~---  187 (302)
T 1iz0_A          124 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-AL-----GAEE---AATYAEVPE----RAKAW---  187 (302)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HT-----TCSE---EEEGGGHHH----HHHHT---
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc-----CCCE---EEECCcchh----HHHHh---
Confidence            36899999999999999999999999999999999888766542 22     2221   234444 22    22222   


Q ss_pred             CCCeeEEEEcccC
Q 021391          106 GRPLNILINNAGI  118 (313)
Q Consensus       106 ~g~id~lv~~ag~  118 (313)
                       +++|++|+ +|.
T Consensus       188 -~~~d~vid-~g~  198 (302)
T 1iz0_A          188 -GGLDLVLE-VRG  198 (302)
T ss_dssp             -TSEEEEEE-CSC
T ss_pred             -cCceEEEE-CCH
Confidence             57999999 873

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.67  E-value=0.00035  Score=63.20  Aligned_cols=121  Identities=14%  Similarity=0.093  Sum_probs=75.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHh-CCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKE-IPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      ++++++.|+|++|.+|..++..++..|.  .|++.+.+.++++....++... ++..++.+ .   ++   ..+.++   
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-t---~d---~~~al~---   75 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-T---SD---IKEALT---   75 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-E---SC---HHHHHT---
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-c---CC---HHHHhC---
Confidence            5678999999999999999999999995  7999999988877766666654 22112221 1   12   222222   


Q ss_pred             hcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCe-EEEECCccc
Q 021391          104 SQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGR-IVNVSSEAH  173 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~-iv~isS~~~  173 (313)
                          ..|++|.++|....+.    +.-...+..|+.-    .+.+.+.+.+.    ..++. |+++|....
T Consensus        76 ----dADvVvitaG~p~kpG----~~R~dLl~~N~~I----~~~i~~~i~~~----~p~a~~vlvvsNPvd  130 (343)
T 3fi9_A           76 ----DAKYIVSSGGAPRKEG----MTREDLLKGNAEI----AAQLGKDIKSY----CPDCKHVIIIFNPAD  130 (343)
T ss_dssp             ----TEEEEEECCC-----------CHHHHHHHHHHH----HHHHHHHHHHH----CTTCCEEEECSSSHH
T ss_pred             ----CCCEEEEccCCCCCCC----CCHHHHHHHHHHH----HHHHHHHHHHh----ccCcEEEEEecCchH
Confidence                6899999999753322    1223345566544    44444454543    33564 777776553

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.66  E-value=0.00017  Score=65.20  Aligned_cols=76  Identities=21%  Similarity=0.413  Sum_probs=52.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .|+++||+||+|++|..+++.+...|++|+++ ++.++.+.+ +++     +...    +| .+.+. ...+.+.. ...
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~l-----Ga~~----i~-~~~~~-~~~~~~~~-~~~  215 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RDL-----GATP----ID-ASREP-EDYAAEHT-AGQ  215 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HHH-----TSEE----EE-TTSCH-HHHHHHHH-TTS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HHc-----CCCE----ec-cCCCH-HHHHHHHh-cCC
Confidence            68999999999999999999999999999999 776665433 333     3322    34 33332 22233222 223


Q ss_pred             CeeEEEEccc
Q 021391          108 PLNILINNAG  117 (313)
Q Consensus       108 ~id~lv~~ag  117 (313)
                      ++|++|+|+|
T Consensus       216 g~D~vid~~g  225 (343)
T 3gaz_A          216 GFDLVYDTLG  225 (343)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEECCC
Confidence            7999999998

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.66  E-value=0.00045  Score=62.85  Aligned_cols=83  Identities=18%  Similarity=0.164  Sum_probs=58.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCE-EEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVH-VIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~-V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      .|+++||+|+ |++|...++.+...|++ |++++++.++.+.+. ++     ...+.....|-.+.+++.+.+.+.. ..
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-----~~~~~~~~~~~~~~~~~~~~v~~~t-~g  250 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAK-EI-----CPEVVTHKVERLSAEESAKKIVESF-GG  250 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH-HH-----CTTCEEEECCSCCHHHHHHHHHHHT-SS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-----chhcccccccccchHHHHHHHHHHh-CC
Confidence            6899999998 99999999888889997 999999887766443 33     2244455566555555444333332 12


Q ss_pred             CCeeEEEEcccC
Q 021391          107 RPLNILINNAGI  118 (313)
Q Consensus       107 g~id~lv~~ag~  118 (313)
                      .++|++|.+.|.
T Consensus       251 ~g~Dvvid~~g~  262 (363)
T 3m6i_A          251 IEPAVALECTGV  262 (363)
T ss_dssp             CCCSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999983

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.61  E-value=7.9e-05  Score=61.01  Aligned_cols=79  Identities=15%  Similarity=0.137  Sum_probs=58.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHc-CCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALR-GVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .++.++.++|.| .|.+|..+++.|.+. |++|++++++++..+...    ..    .+..+..|.++++.+.++     
T Consensus        35 ~~~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~----~~----g~~~~~gd~~~~~~l~~~-----  100 (183)
T 3c85_A           35 INPGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHR----SE----GRNVISGDATDPDFWERI-----  100 (183)
T ss_dssp             BCCTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH----HT----TCCEEECCTTCHHHHHTB-----
T ss_pred             cCCCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH----HC----CCCEEEcCCCCHHHHHhc-----
Confidence            456778899998 599999999999999 999999999987765532    21    355678899987654322     


Q ss_pred             hcCCCeeEEEEccc
Q 021391          104 SQGRPLNILINNAG  117 (313)
Q Consensus       104 ~~~g~id~lv~~ag  117 (313)
                      ....+.|++|.+.+
T Consensus       101 ~~~~~ad~vi~~~~  114 (183)
T 3c85_A          101 LDTGHVKLVLLAMP  114 (183)
T ss_dssp             CSCCCCCEEEECCS
T ss_pred             cCCCCCCEEEEeCC
Confidence            01346899998875

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.60  E-value=0.00022  Score=61.73  Aligned_cols=82  Identities=15%  Similarity=0.289  Sum_probs=63.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCc-------------------hhHHHHHHHHHHhCCCCceEEEE
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNM-------------------AAGKDVREAIVKEIPSAKVDAME   86 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~   86 (313)
                      +++++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.+.+.+.+.+|..++..+.
T Consensus        26 l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~  104 (251)
T 1zud_1           26 LLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQ  104 (251)
T ss_dssp             HHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEe
Confidence            57799999998 6799999999999998 788887653                   67777888888887777777777


Q ss_pred             ccCCCHHHHHHHHHHHhhcCCCeeEEEEccc
Q 021391           87 LDVSSLASVRKFASEYNSQGRPLNILINNAG  117 (313)
Q Consensus        87 ~D~s~~~~v~~~~~~~~~~~g~id~lv~~ag  117 (313)
                      .+++. +.+..+++       ..|+||++..
T Consensus       105 ~~~~~-~~~~~~~~-------~~DvVi~~~d  127 (251)
T 1zud_1          105 QRLTG-EALKDAVA-------RADVVLDCTD  127 (251)
T ss_dssp             SCCCH-HHHHHHHH-------HCSEEEECCS
T ss_pred             ccCCH-HHHHHHHh-------cCCEEEECCC
Confidence            66654 34555554       4799998863

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.59  E-value=0.0016  Score=58.53  Aligned_cols=121  Identities=12%  Similarity=0.009  Sum_probs=79.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHh--CCCCceEEEEccCCCHHHHHHHHHH
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKE--IPSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      ....+++.|+|+ |.+|.+++..|+..|.  .|++.+++.++++....++...  ++.. ...+..+  |.+        
T Consensus        16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~-~~i~~~~--d~~--------   83 (331)
T 4aj2_A           16 QVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKT-PKIVSSK--DYS--------   83 (331)
T ss_dssp             -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSC-CEEEECS--SGG--------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCC-CeEEEcC--CHH--------
Confidence            346688999998 8999999999999997  8999999988888877777653  2211 1222221  211        


Q ss_pred             HhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          102 YNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                         .....|++|.++|....+. .+   -.+.++.|.--...+.+.+    .+.    .+++.++++|....
T Consensus        84 ---~~~~aDiVvi~aG~~~kpG-~t---R~dL~~~N~~I~~~i~~~i----~~~----~p~a~vlvvtNPvd  140 (331)
T 4aj2_A           84 ---VTANSKLVIITAGARQQEG-ES---RLNLVQRNVNIFKFIIPNV----VKY----SPQCKLLIVSNPVD  140 (331)
T ss_dssp             ---GGTTEEEEEECCSCCCCTT-CC---GGGGHHHHHHHHHHHHHHH----HHH----CTTCEEEECSSSHH
T ss_pred             ---HhCCCCEEEEccCCCCCCC-cc---HHHHHHHHHHHHHHHHHHH----HHH----CCCeEEEEecChHH
Confidence               1247899999999754432 22   2345556655444444444    443    34688888887654

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.59  E-value=0.00093  Score=60.02  Aligned_cols=120  Identities=12%  Similarity=0.017  Sum_probs=78.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHhCCC--CceEEEEccCCCHHHHHHHHHHH
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKEIPS--AKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~--~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      .+.+++.|+|+ |.+|.+++..|+..|.  .|++.+++.++++....++....|-  ..+.....|   .          
T Consensus         3 ~~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~----------   68 (326)
T 3pqe_A            3 KHVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y----------   68 (326)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---G----------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---H----------
Confidence            34678999996 9999999999999997  8999999988888777677654321  123332222   1          


Q ss_pred             hhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          103 NSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                       +.....|++|.++|....+. .   .-...+..|..-    .+.+.+.+.+.    .+++.++++|....
T Consensus        69 -~a~~~aDvVvi~ag~p~kpG-~---~R~dL~~~N~~I----v~~i~~~I~~~----~p~a~vlvvtNPvd  126 (326)
T 3pqe_A           69 -EDCKDADIVCICAGANQKPG-E---TRLELVEKNLKI----FKGIVSEVMAS----GFDGIFLVATNPVD  126 (326)
T ss_dssp             -GGGTTCSEEEECCSCCCCTT-C---CHHHHHHHHHHH----HHHHHHHHHHT----TCCSEEEECSSSHH
T ss_pred             -HHhCCCCEEEEecccCCCCC-c---cHHHHHHHHHHH----HHHHHHHHHHh----cCCeEEEEcCChHH
Confidence             12236899999999753322 1   122345555544    44444555553    34678888887654

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.58  E-value=0.00053  Score=62.14  Aligned_cols=81  Identities=22%  Similarity=0.214  Sum_probs=53.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCC-HHHHHHHHHHHhh-c
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSS-LASVRKFASEYNS-Q  105 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~-~~~v~~~~~~~~~-~  105 (313)
                      .|+++||+|+ |++|..+++.+...|++|++++++.++.+.+. ++     +.. .  ..|..+ .+..+++.+.... .
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~-~--~~~~~~~~~~~~~i~~~~~~~~  237 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NC-----GAD-V--TLVVDPAKEEESSIIERIRSAI  237 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HT-----TCS-E--EEECCTTTSCHHHHHHHHHHHS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-Hh-----CCC-E--EEcCcccccHHHHHHHHhcccc
Confidence            6899999997 89999999988889999999999877665432 22     222 2  234443 2222222221110 1


Q ss_pred             CCCeeEEEEcccC
Q 021391          106 GRPLNILINNAGI  118 (313)
Q Consensus       106 ~g~id~lv~~ag~  118 (313)
                      .+++|++|+++|.
T Consensus       238 g~g~D~vid~~g~  250 (352)
T 1e3j_A          238 GDLPNVTIDCSGN  250 (352)
T ss_dssp             SSCCSEEEECSCC
T ss_pred             CCCCCEEEECCCC
Confidence            2369999999983

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.54  E-value=6.6e-05  Score=59.07  Aligned_cols=71  Identities=14%  Similarity=0.217  Sum_probs=53.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      +++++|.|+ |++|+.+++.|.+.|++|++++|+.++.++..+++     +  ....  +..+.   ..+++       .
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~-----~--~~~~--~~~~~---~~~~~-------~   80 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY-----E--YEYV--LINDI---DSLIK-------N   80 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH-----T--CEEE--ECSCH---HHHHH-------T
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh-----C--CceE--eecCH---HHHhc-------C
Confidence            899999996 99999999999999999999999988877765554     2  1111  23332   33333       5


Q ss_pred             eeEEEEcccCC
Q 021391          109 LNILINNAGIM  119 (313)
Q Consensus       109 id~lv~~ag~~  119 (313)
                      .|++|++.+..
T Consensus        81 ~Divi~at~~~   91 (144)
T 3oj0_A           81 NDVIITATSSK   91 (144)
T ss_dssp             CSEEEECSCCS
T ss_pred             CCEEEEeCCCC
Confidence            79999998754

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.50  E-value=0.00051  Score=61.72  Aligned_cols=125  Identities=13%  Similarity=0.172  Sum_probs=73.5

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHhCCC-CceEEEEccCCCHHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKEIPS-AKVDAMELDVSSLASVRKF   98 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~D~s~~~~v~~~   98 (313)
                      .+.++.+++++.|+|+ |++|.+++..|+..|.  .|++.+++.++++....++....+- ..+.....|   .      
T Consensus         2 ~~~~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~---~------   71 (326)
T 3vku_A            2 ASITDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE---Y------   71 (326)
T ss_dssp             -----CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC---G------
T ss_pred             cccccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc---H------
Confidence            3456678889999997 9999999999999987  8999999988888777777654220 122222211   1      


Q ss_pred             HHHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391           99 ASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus        99 ~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                           +.+...|++|.++|....+. .+.   ...++.|.-    +.+.+.+.+.+.    .+++.++++|....
T Consensus        72 -----~a~~~aDiVvi~ag~~~kpG-~tR---~dL~~~N~~----I~~~i~~~i~~~----~p~a~ilvvtNPvd  129 (326)
T 3vku_A           72 -----SDAKDADLVVITAGAPQKPG-ETR---LDLVNKNLK----ILKSIVDPIVDS----GFNGIFLVAANPVD  129 (326)
T ss_dssp             -----GGGTTCSEEEECCCCC------------------------CHHHHHHHHHTT----TCCSEEEECSSSHH
T ss_pred             -----HHhcCCCEEEECCCCCCCCC-chH---HHHHHHHHH----HHHHHHHHHHhc----CCceEEEEccCchH
Confidence                 12347899999999754332 122   223444443    344555555553    34788888887654

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.49  E-value=0.00016  Score=64.43  Aligned_cols=94  Identities=17%  Similarity=0.195  Sum_probs=61.5

Q ss_pred             CCCCCE-EEEeCCCC-----------------c-hHHHHHHHHHHcCCEEEEEecCchhHH------HH--HHHHHHh-C
Q 021391           26 DGTGLT-AIVTGASS-----------------G-IGTETARVLALRGVHVIMAVRNMAAGK------DV--REAIVKE-I   77 (313)
Q Consensus        26 ~~~gk~-~lItGas~-----------------g-iG~aia~~La~~G~~V~l~~r~~~~~~------~~--~~~l~~~-~   77 (313)
                      +++||+ ||||+|+.                 | .|.++|+.++++|+.|+++.+......      ..  .+.+... .
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~  112 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGP  112 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhccccc
Confidence            468888 99998775                 6 999999999999999999987532110      00  0100000 0


Q ss_pred             CCCceEEEEccCCCHHHHHHHHHHH------------------------------hhcCCCeeEEEEcccCC
Q 021391           78 PSAKVDAMELDVSSLASVRKFASEY------------------------------NSQGRPLNILINNAGIM  119 (313)
Q Consensus        78 ~~~~~~~~~~D~s~~~~v~~~~~~~------------------------------~~~~g~id~lv~~ag~~  119 (313)
                      .+.....+.+|+.+..++.+++.+.                              .+.++..|++|++|++.
T Consensus       113 ~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVs  184 (313)
T 1p9o_A          113 ALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVS  184 (313)
T ss_dssp             -CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCC
T ss_pred             cccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchh
Confidence            0123456677777766666666543                              23456799999999975

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.48  E-value=0.00017  Score=65.14  Aligned_cols=77  Identities=18%  Similarity=0.235  Sum_probs=53.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      .|+++||+|| |++|..+++.+...|+ +|+.++++.++.+.+. ++     ..    ...|..+.+ +.+.+.++.  .
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~l-----a~----~v~~~~~~~-~~~~~~~~~--~  229 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFAR-PY-----AD----RLVNPLEED-LLEVVRRVT--G  229 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGT-TT-----CS----EEECTTTSC-HHHHHHHHH--S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-----HH----hccCcCccC-HHHHHHHhc--C
Confidence            8999999999 9999999998888999 8999999876654321 11     11    124555432 333333332  3


Q ss_pred             CCeeEEEEcccC
Q 021391          107 RPLNILINNAGI  118 (313)
Q Consensus       107 g~id~lv~~ag~  118 (313)
                      +++|++|.++|.
T Consensus       230 ~g~D~vid~~g~  241 (343)
T 2dq4_A          230 SGVEVLLEFSGN  241 (343)
T ss_dssp             SCEEEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999983

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.48  E-value=0.0022  Score=57.28  Aligned_cols=122  Identities=20%  Similarity=0.161  Sum_probs=76.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecC--chhHHHHHHHHHHhC----CCCceEEEEccCCCHHHHH
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRN--MAAGKDVREAIVKEI----PSAKVDAMELDVSSLASVR   96 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~--~~~~~~~~~~l~~~~----~~~~~~~~~~D~s~~~~v~   96 (313)
                      .|.++.+++.|+|+ |.+|.+++..|+..|. .|++.+++  .++.+....++....    ...++.. ..|   .    
T Consensus         3 ~m~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~-t~d---~----   73 (315)
T 3tl2_A            3 AMTIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG-TSD---Y----   73 (315)
T ss_dssp             -CCCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE-ESC---G----
T ss_pred             CcccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE-cCC---H----
Confidence            45667889999997 9999999999999999 99999998  555555444444321    1112221 112   1    


Q ss_pred             HHHHHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391           97 KFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus        97 ~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                             +.+...|++|.++|....+. .+   -...+..|..-.    +.+.+.+.+.    .+++.++++|-...
T Consensus        74 -------~a~~~aDvVIiaag~p~kpg-~~---R~dl~~~N~~i~----~~i~~~i~~~----~p~a~vlvvsNPvd  131 (315)
T 3tl2_A           74 -------ADTADSDVVVITAGIARKPG-MS---RDDLVATNSKIM----KSITRDIAKH----SPNAIIVVLTNPVD  131 (315)
T ss_dssp             -------GGGTTCSEEEECCSCCCCTT-CC---HHHHHHHHHHHH----HHHHHHHHHH----CTTCEEEECCSSHH
T ss_pred             -------HHhCCCCEEEEeCCCCCCCC-CC---HHHHHHHHHHHH----HHHHHHHHHh----CCCeEEEECCChHH
Confidence                   12347899999999754432 12   234455555444    4444444443    34678888887654

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=97.47  E-value=0.0003  Score=63.42  Aligned_cols=120  Identities=11%  Similarity=0.025  Sum_probs=75.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--E-----EEEEecCc--hhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHH
Q 021391           30 LTAIVTGASSGIGTETARVLALRGV--H-----VIMAVRNM--AAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFAS  100 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~--~-----V~l~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~  100 (313)
                      ++|+||||+|.||.+++..|+..|.  .     +++.+++.  +.++....++...... -..  ....++  ...+   
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~-~~~--~~~~~~--~~~~---   75 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALP-LLK--DVIATD--KEEI---   75 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCT-TEE--EEEEES--CHHH---
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhc-ccC--CEEEcC--CcHH---
Confidence            5799999999999999999998875  4     99999874  4566666666653111 111  111111  1111   


Q ss_pred             HHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCC-eEEEECCccc
Q 021391          101 EYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREG-RIVNVSSEAH  173 (313)
Q Consensus       101 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g-~iv~isS~~~  173 (313)
                          .+...|++|++||....+.    +.-...++.|+.....+++.+..+        ..++ .++++|-...
T Consensus        76 ----~~~daDvVvitAg~prkpG----~tR~dll~~N~~i~~~i~~~i~~~--------~~~~~~vivvsNPvd  133 (333)
T 5mdh_A           76 ----AFKDLDVAILVGSMPRRDG----MERKDLLKANVKIFKCQGAALDKY--------AKKSVKVIVVGNPAN  133 (333)
T ss_dssp             ----HTTTCSEEEECCSCCCCTT----CCTTTTHHHHHHHHHHHHHHHHHH--------SCTTCEEEECSSSHH
T ss_pred             ----HhCCCCEEEEeCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHh--------CCCCeEEEEcCCchH
Confidence                1347899999998754322    234455777777665555555443        2345 5888887654

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.47  E-value=0.00034  Score=64.05  Aligned_cols=77  Identities=26%  Similarity=0.371  Sum_probs=52.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      -.|+++||+||+|++|..+++.+...|++|+.++ +.++.+.+ +++     +...   .+|..+.+-.    +++.+ .
T Consensus       182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~-~~l-----Ga~~---v~~~~~~~~~----~~~~~-~  246 (375)
T 2vn8_A          182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELV-RKL-----GADD---VIDYKSGSVE----EQLKS-L  246 (375)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHH-HHT-----TCSE---EEETTSSCHH----HHHHT-S
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHH-HHc-----CCCE---EEECCchHHH----HHHhh-c
Confidence            3689999999999999999999889999999988 44444332 322     2221   2354443322    23332 2


Q ss_pred             CCeeEEEEcccC
Q 021391          107 RPLNILINNAGI  118 (313)
Q Consensus       107 g~id~lv~~ag~  118 (313)
                      +++|++|+|+|.
T Consensus       247 ~g~D~vid~~g~  258 (375)
T 2vn8_A          247 KPFDFILDNVGG  258 (375)
T ss_dssp             CCBSEEEESSCT
T ss_pred             CCCCEEEECCCC
Confidence            579999999984

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.45  E-value=0.00045  Score=53.97  Aligned_cols=73  Identities=14%  Similarity=0.101  Sum_probs=56.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      +.++|.|+ |.+|+.+++.|.+.|+.|++++++++..+...+        ..+.++..|.++++.++++      ...+.
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~--------~g~~~i~gd~~~~~~l~~a------~i~~a   72 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE--------RGVRAVLGNAANEEIMQLA------HLECA   72 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH--------TTCEEEESCTTSHHHHHHT------TGGGC
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH--------cCCCEEECCCCCHHHHHhc------CcccC
Confidence            45777786 889999999999999999999999887665432        2466789999998865443      11257


Q ss_pred             eEEEEccc
Q 021391          110 NILINNAG  117 (313)
Q Consensus       110 d~lv~~ag  117 (313)
                      |.+|.+.+
T Consensus        73 d~vi~~~~   80 (140)
T 3fwz_A           73 KWLILTIP   80 (140)
T ss_dssp             SEEEECCS
T ss_pred             CEEEEECC
Confidence            88888875

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.42  E-value=0.00028  Score=59.51  Aligned_cols=73  Identities=14%  Similarity=0.120  Sum_probs=57.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCee
Q 021391           31 TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLN  110 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~id  110 (313)
                      +++|.|+ |.+|+.+++.|.++|+.|++++++++..+...+.       ....++..|.++++.++.+      .....|
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~-------~~~~~i~gd~~~~~~l~~a------~i~~ad   67 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK-------LKATIIHGDGSHKEILRDA------EVSKND   67 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH-------SSSEEEESCTTSHHHHHHH------TCCTTC
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH-------cCCeEEEcCCCCHHHHHhc------CcccCC
Confidence            5899996 8999999999999999999999998876654432       1466899999998766543      123678


Q ss_pred             EEEEccc
Q 021391          111 ILINNAG  117 (313)
Q Consensus       111 ~lv~~ag  117 (313)
                      ++|.+.+
T Consensus        68 ~vi~~~~   74 (218)
T 3l4b_C           68 VVVILTP   74 (218)
T ss_dssp             EEEECCS
T ss_pred             EEEEecC
Confidence            9988764

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.38  E-value=0.0014  Score=59.55  Aligned_cols=79  Identities=22%  Similarity=0.211  Sum_probs=52.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCC--CHHHHHHHHHHHhh
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS--SLASVRKFASEYNS  104 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s--~~~~v~~~~~~~~~  104 (313)
                      .|.++||+|+ |++|...++.+...|+ +|++++++.++.+.+. ++     +.. .  .+|..  +.++..+.+.+...
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~-~--vi~~~~~~~~~~~~~i~~~~~  240 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI-----GAD-L--VLQISKESPQEIARKVEGQLG  240 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT-----TCS-E--EEECSSCCHHHHHHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-----CCC-E--EEcCcccccchHHHHHHHHhC
Confidence            6899999996 8999999988888999 8999999877655432 22     222 2  23444  22222222222221


Q ss_pred             cCCCeeEEEEcccC
Q 021391          105 QGRPLNILINNAGI  118 (313)
Q Consensus       105 ~~g~id~lv~~ag~  118 (313)
                        +++|++|.++|.
T Consensus       241 --~g~D~vid~~g~  252 (356)
T 1pl8_A          241 --CKPEVTIECTGA  252 (356)
T ss_dssp             --SCCSEEEECSCC
T ss_pred             --CCCCEEEECCCC
Confidence              479999999983

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.37  E-value=0.00056  Score=62.55  Aligned_cols=79  Identities=15%  Similarity=0.183  Sum_probs=54.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCC-HHHHHHHHHHHhhc
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSS-LASVRKFASEYNSQ  105 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~-~~~v~~~~~~~~~~  105 (313)
                      .|+++||+|+ |++|..+++.+...|+ +|+.++++.++.+.+. ++     +.. .  .+|..+ .+++.+.+.++.. 
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~-~--vi~~~~~~~~~~~~~~~~~~-  260 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VF-----GAT-D--FVNPNDHSEPISQVLSKMTN-  260 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-----TCC-E--EECGGGCSSCHHHHHHHHHT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hh-----CCc-e--EEeccccchhHHHHHHHHhC-
Confidence            6899999996 8999999998888999 8999999888766542 22     222 1  234443 1223333443332 


Q ss_pred             CCCeeEEEEcccC
Q 021391          106 GRPLNILINNAGI  118 (313)
Q Consensus       106 ~g~id~lv~~ag~  118 (313)
                       +++|++|+++|.
T Consensus       261 -~g~D~vid~~g~  272 (374)
T 1cdo_A          261 -GGVDFSLECVGN  272 (374)
T ss_dssp             -SCBSEEEECSCC
T ss_pred             -CCCCEEEECCCC
Confidence             479999999984

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.37  E-value=0.00066  Score=62.93  Aligned_cols=73  Identities=19%  Similarity=0.327  Sum_probs=54.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      ++.|++++|.|+ |++|+.+++.|...|+ +|++++|+.++.++..+++     +..  .  .+..   ++..++.    
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~-----g~~--~--~~~~---~l~~~l~----  226 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL-----GGE--A--VRFD---ELVDHLA----  226 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH-----TCE--E--CCGG---GHHHHHH----
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc-----CCc--e--ecHH---hHHHHhc----
Confidence            579999999998 9999999999999999 9999999987776655544     222  1  2222   2333332    


Q ss_pred             cCCCeeEEEEcccC
Q 021391          105 QGRPLNILINNAGI  118 (313)
Q Consensus       105 ~~g~id~lv~~ag~  118 (313)
                         ..|++|++.|.
T Consensus       227 ---~aDvVi~at~~  237 (404)
T 1gpj_A          227 ---RSDVVVSATAA  237 (404)
T ss_dssp             ---TCSEEEECCSS
T ss_pred             ---CCCEEEEccCC
Confidence               68999999864

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=97.32  E-value=0.00094  Score=60.96  Aligned_cols=79  Identities=14%  Similarity=0.145  Sum_probs=54.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCC-HHHHHHHHHHHhhc
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSS-LASVRKFASEYNSQ  105 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~-~~~v~~~~~~~~~~  105 (313)
                      .|+++||+|+ |++|..+++.+...|+ +|+.++++.++.+.+. ++     +...   .+|..+ .+++.+.+.++.. 
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~~---vi~~~~~~~~~~~~v~~~~~-  258 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EF-----GATE---CINPQDFSKPIQEVLIEMTD-  258 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HH-----TCSE---EECGGGCSSCHHHHHHHHTT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc-----CCce---EeccccccccHHHHHHHHhC-
Confidence            6899999996 8999999988888999 8999999888766543 33     3221   234332 1223333333322 


Q ss_pred             CCCeeEEEEcccC
Q 021391          106 GRPLNILINNAGI  118 (313)
Q Consensus       106 ~g~id~lv~~ag~  118 (313)
                       +++|++|.++|.
T Consensus       259 -~g~D~vid~~g~  270 (373)
T 2fzw_A          259 -GGVDYSFECIGN  270 (373)
T ss_dssp             -SCBSEEEECSCC
T ss_pred             -CCCCEEEECCCc
Confidence             479999999984

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.32  E-value=0.00016  Score=63.50  Aligned_cols=45  Identities=18%  Similarity=0.037  Sum_probs=39.7

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHH
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDV   69 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~   69 (313)
                      ..+++||+++|+|+ ||+|++++..|++.|+ +|+++.|+.++.+++
T Consensus       112 ~~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~l  157 (277)
T 3don_A          112 YEGIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNW  157 (277)
T ss_dssp             STTGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTC
T ss_pred             CCCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence            45688999999997 7999999999999999 899999998776543

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.31  E-value=0.00074  Score=58.94  Aligned_cols=67  Identities=18%  Similarity=0.209  Sum_probs=51.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      +|+++|.|+ ||.|++++..|++.|.+|+++.|+.++++++. ++     +  +...  +..+.              ..
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~-----~--~~~~--~~~~l--------------~~  172 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL-----G--CDCF--MEPPK--------------SA  172 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH-----T--CEEE--SSCCS--------------SC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC-----C--CeEe--cHHHh--------------cc
Confidence            899999997 89999999999999999999999999888776 44     2  2222  22221              15


Q ss_pred             eeEEEEcccCCC
Q 021391          109 LNILINNAGIMA  120 (313)
Q Consensus       109 id~lv~~ag~~~  120 (313)
                      .|+|||+.....
T Consensus       173 ~DiVInaTp~Gm  184 (269)
T 3phh_A          173 FDLIINATSASL  184 (269)
T ss_dssp             CSEEEECCTTCC
T ss_pred             CCEEEEcccCCC
Confidence            799999986543

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.30  E-value=0.0012  Score=60.35  Aligned_cols=79  Identities=15%  Similarity=0.195  Sum_probs=54.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCC-HHHHHHHHHHHhhc
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSS-LASVRKFASEYNSQ  105 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~-~~~v~~~~~~~~~~  105 (313)
                      .|+++||+|+ |++|..+++.+...|+ +|+.++++.++.+.+. ++     +.. .  .+|..+ .+++.+.+.++.. 
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~-~--vi~~~~~~~~~~~~~~~~~~-  259 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EV-----GAT-E--CVNPQDYKKPIQEVLTEMSN-  259 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-----TCS-E--EECGGGCSSCHHHHHHHHTT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh-----CCc-e--EecccccchhHHHHHHHHhC-
Confidence            6899999995 8999999998888999 8999999888766542 22     222 1  234432 1223333333322 


Q ss_pred             CCCeeEEEEcccC
Q 021391          106 GRPLNILINNAGI  118 (313)
Q Consensus       106 ~g~id~lv~~ag~  118 (313)
                       +++|++|.++|.
T Consensus       260 -~g~D~vid~~g~  271 (374)
T 2jhf_A          260 -GGVDFSFEVIGR  271 (374)
T ss_dssp             -SCBSEEEECSCC
T ss_pred             -CCCcEEEECCCC
Confidence             479999999984

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.29  E-value=0.0034  Score=56.26  Aligned_cols=119  Identities=18%  Similarity=0.191  Sum_probs=74.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCC----CCceEEEEccCCCHHHHHHHHHH
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIP----SAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~----~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      |+.+++.|+|| |.+|.+++..|+..|. .|++.++++++++....++....+    ..++.. ..|   .+        
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-t~d---~~--------   71 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG-AND---YA--------   71 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESS---GG--------
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE-eCC---HH--------
Confidence            45678999998 9999999999999998 999999999887655555554311    122221 122   11        


Q ss_pred             HhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          102 YNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                         .+..-|++|.++|....+. .+.   ...+..|..    +.+.+.+.+.+.    .+++.++++|-...
T Consensus        72 ---a~~~aDiVIiaag~p~k~G-~~R---~dl~~~N~~----i~~~i~~~i~~~----~p~a~iivvtNPvd  128 (324)
T 3gvi_A           72 ---AIEGADVVIVTAGVPRKPG-MSR---DDLLGINLK----VMEQVGAGIKKY----APEAFVICITNPLD  128 (324)
T ss_dssp             ---GGTTCSEEEECCSCCCC---------CHHHHHHHH----HHHHHHHHHHHH----CTTCEEEECCSSHH
T ss_pred             ---HHCCCCEEEEccCcCCCCC-CCH---HHHHHhhHH----HHHHHHHHHHHH----CCCeEEEecCCCcH
Confidence               1236899999999754432 222   223444544    444555555554    34678888887654

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=97.29  E-value=0.00086  Score=60.35  Aligned_cols=63  Identities=14%  Similarity=0.234  Sum_probs=52.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCc-------------------hhHHHHHHHHHHhCCCCceEEE
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNM-------------------AAGKDVREAIVKEIPSAKVDAM   85 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~   85 (313)
                      .+++++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.+.+.+.+.+|..++..+
T Consensus        31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~  109 (340)
T 3rui_A           31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  109 (340)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEE
Confidence            367899999987 6999999999999998 799988764                   5777788888888887777777


Q ss_pred             EccC
Q 021391           86 ELDV   89 (313)
Q Consensus        86 ~~D~   89 (313)
                      ..++
T Consensus       110 ~~~i  113 (340)
T 3rui_A          110 KLSI  113 (340)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            7665

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.28  E-value=0.00031  Score=58.75  Aligned_cols=42  Identities=17%  Similarity=0.252  Sum_probs=37.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHH
Q 021391           31 TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREA   72 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~   72 (313)
                      +++|+||+|.+|.++++.|++.|++|++++|+.++.+...+.
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   43 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            688999999999999999999999999999998777665543

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=97.26  E-value=0.0021  Score=59.36  Aligned_cols=80  Identities=18%  Similarity=0.317  Sum_probs=53.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      -.|.++||+|| |++|...++.+...|+ +|+.++++.++.+.+ +++     +...   .+|..+.+-.+.+ .++- .
T Consensus       212 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~l-----Ga~~---vi~~~~~~~~~~i-~~~t-~  279 (404)
T 3ip1_A          212 RPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KEL-----GADH---VIDPTKENFVEAV-LDYT-N  279 (404)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHH-----TCSE---EECTTTSCHHHHH-HHHT-T
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc-----CCCE---EEcCCCCCHHHHH-HHHh-C
Confidence            46899999998 8999999988888999 899999887766543 333     3221   2344444322222 2221 1


Q ss_pred             CCCeeEEEEcccC
Q 021391          106 GRPLNILINNAGI  118 (313)
Q Consensus       106 ~g~id~lv~~ag~  118 (313)
                      ..++|++|.++|.
T Consensus       280 g~g~D~vid~~g~  292 (404)
T 3ip1_A          280 GLGAKLFLEATGV  292 (404)
T ss_dssp             TCCCSEEEECSSC
T ss_pred             CCCCCEEEECCCC
Confidence            2269999999984

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.26  E-value=0.0012  Score=60.17  Aligned_cols=78  Identities=15%  Similarity=0.181  Sum_probs=53.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .|+++||+| +|++|...++.+...|++|++++++.++.+.+ +++     +...   .+| .+.+++.+.+.++.. ..
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l-----Ga~~---vi~-~~~~~~~~~v~~~~~-g~  256 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FAL-----GADH---GIN-RLEEDWVERVYALTG-DR  256 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH-----TCSE---EEE-TTTSCHHHHHHHHHT-TC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHc-----CCCE---EEc-CCcccHHHHHHHHhC-CC
Confidence            689999999 89999999999889999999999998776653 333     3322   224 332223333333221 23


Q ss_pred             CeeEEEEccc
Q 021391          108 PLNILINNAG  117 (313)
Q Consensus       108 ~id~lv~~ag  117 (313)
                      ++|++|.++|
T Consensus       257 g~D~vid~~g  266 (363)
T 3uog_A          257 GADHILEIAG  266 (363)
T ss_dssp             CEEEEEEETT
T ss_pred             CceEEEECCC
Confidence            7999999998

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.25  E-value=0.0004  Score=62.27  Aligned_cols=77  Identities=22%  Similarity=0.270  Sum_probs=50.6

Q ss_pred             CC-EEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           29 GL-TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        29 gk-~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      |+ ++||+||+|++|..+++.+...|++|+.++++.++.+.+. ++     +...   .+|..+.+  ...++++  ..+
T Consensus       149 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~l-----Ga~~---~i~~~~~~--~~~~~~~--~~~  215 (328)
T 1xa0_A          149 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VL-----GAKE---VLAREDVM--AERIRPL--DKQ  215 (328)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HT-----TCSE---EEECC-----------C--CSC
T ss_pred             CCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-Hc-----CCcE---EEecCCcH--HHHHHHh--cCC
Confidence            44 7999999999999999998899999999999877766542 22     2221   23444432  1222222  124


Q ss_pred             CeeEEEEcccC
Q 021391          108 PLNILINNAGI  118 (313)
Q Consensus       108 ~id~lv~~ag~  118 (313)
                      ++|++|+++|.
T Consensus       216 ~~d~vid~~g~  226 (328)
T 1xa0_A          216 RWAAAVDPVGG  226 (328)
T ss_dssp             CEEEEEECSTT
T ss_pred             cccEEEECCcH
Confidence            79999999984

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.22  E-value=0.0011  Score=60.22  Aligned_cols=38  Identities=21%  Similarity=0.294  Sum_probs=33.8

Q ss_pred             CC-CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchh
Q 021391           28 TG-LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAA   65 (313)
Q Consensus        28 ~g-k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~   65 (313)
                      .| .++||+||+|++|...++.+...|++|+.++++.++
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~  204 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN  204 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccc
Confidence            57 999999999999999988888889999999877665

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.22  E-value=0.0014  Score=59.93  Aligned_cols=79  Identities=19%  Similarity=0.188  Sum_probs=53.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCC-HHHHHHHHHHHhhc
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSS-LASVRKFASEYNSQ  105 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~-~~~v~~~~~~~~~~  105 (313)
                      .|.+|||+|+ |++|..+++.+...|+ +|+.++++.++.+.+. ++     +...   .+|..+ .+++.+.+.++.. 
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~~---vi~~~~~~~~~~~~v~~~~~-  263 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-AL-----GATD---CLNPRELDKPVQDVITELTA-  263 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-----TCSE---EECGGGCSSCHHHHHHHHHT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh-----CCcE---EEccccccchHHHHHHHHhC-
Confidence            6899999996 8999999988888999 8999999888766442 22     2221   234332 1123333333322 


Q ss_pred             CCCeeEEEEcccC
Q 021391          106 GRPLNILINNAGI  118 (313)
Q Consensus       106 ~g~id~lv~~ag~  118 (313)
                       +++|++|.++|.
T Consensus       264 -~g~Dvvid~~G~  275 (376)
T 1e3i_A          264 -GGVDYSLDCAGT  275 (376)
T ss_dssp             -SCBSEEEESSCC
T ss_pred             -CCccEEEECCCC
Confidence             479999999984

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=97.21  E-value=0.00074  Score=60.35  Aligned_cols=73  Identities=21%  Similarity=0.276  Sum_probs=50.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      |+ +||+||+|++|...++.+...|++|+.++++.++.+.+. ++     +....+   |..+.+.    ++++  ..++
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~vi---~~~~~~~----~~~~--~~~~  211 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK-SL-----GANRIL---SRDEFAE----SRPL--EKQL  211 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HH-----TCSEEE---EGGGSSC----CCSS--CCCC
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc-----CCCEEE---ecCCHHH----HHhh--cCCC
Confidence            46 999999999999999999999999999999988766543 33     332222   2222111    1111  1247


Q ss_pred             eeEEEEccc
Q 021391          109 LNILINNAG  117 (313)
Q Consensus       109 id~lv~~ag  117 (313)
                      +|++|.+.|
T Consensus       212 ~d~v~d~~g  220 (324)
T 3nx4_A          212 WAGAIDTVG  220 (324)
T ss_dssp             EEEEEESSC
T ss_pred             ccEEEECCC
Confidence            999999986

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.21  E-value=0.00081  Score=60.58  Aligned_cols=77  Identities=13%  Similarity=0.121  Sum_probs=54.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      -.|+++||+|+ |++|...++.+...|++|+.++++.++.+.+ +++     +...   ..|..+.+..+.+.+    ..
T Consensus       165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l-----Ga~~---~i~~~~~~~~~~~~~----~~  230 (340)
T 3s2e_A          165 RPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLA-RRL-----GAEV---AVNARDTDPAAWLQK----EI  230 (340)
T ss_dssp             CTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHT-----TCSE---EEETTTSCHHHHHHH----HH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHc-----CCCE---EEeCCCcCHHHHHHH----hC
Confidence            37899999997 8999999998888999999999998776643 222     2222   235555443333332    23


Q ss_pred             CCeeEEEEccc
Q 021391          107 RPLNILINNAG  117 (313)
Q Consensus       107 g~id~lv~~ag  117 (313)
                      +++|++|.++|
T Consensus       231 g~~d~vid~~g  241 (340)
T 3s2e_A          231 GGAHGVLVTAV  241 (340)
T ss_dssp             SSEEEEEESSC
T ss_pred             CCCCEEEEeCC
Confidence            58999999987

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.18  E-value=0.011  Score=53.04  Aligned_cols=119  Identities=12%  Similarity=-0.021  Sum_probs=77.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHhC--CCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKEI--PSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      ..+++.|+|+ |.+|..++..|+..|.  .|++.+++.++++....++....  +...-.....|..+            
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~------------   86 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV------------   86 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH------------
Confidence            4578999999 9999999999999997  89999999988887766666531  11111122234332            


Q ss_pred             hcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          104 SQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                        +...|++|.++|....+. .+.   .+.+..|..-    .+.+.+.+.+.    .+++.++++|....
T Consensus        87 --~~daDiVIitaG~p~kpG-~tR---~dll~~N~~I----~k~i~~~I~k~----~P~a~ilvvtNPvd  142 (330)
T 3ldh_A           87 --SAGSKLVVITAGARQQEG-ESR---LNLVQRNVNI----FKFIIPNIVKH----SPDCLKELHPELGT  142 (330)
T ss_dssp             --CSSCSEEEECCSCCCCSS-CCT---TGGGHHHHHH----HHHHHHHHHHH----CTTCEEEECSSSHH
T ss_pred             --hCCCCEEEEeCCCCCCCC-CCH---HHHHHhhHHH----HHHHHHHHHhh----CCCceEEeCCCccH
Confidence              347899999999764432 222   2344455443    44444444443    34678888887654

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=97.16  E-value=0.00077  Score=61.31  Aligned_cols=83  Identities=16%  Similarity=0.337  Sum_probs=66.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCc-------------------hhHHHHHHHHHHhCCCCceEEE
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNM-------------------AAGKDVREAIVKEIPSAKVDAM   85 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~   85 (313)
                      .+++++|+|.|+ ||+|..+++.|+..|. ++.+++++.                   .+.+.+.+.+.+.+|..++..+
T Consensus       115 ~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  193 (353)
T 3h5n_A          115 KLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEI  193 (353)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEe
Confidence            357899999998 7999999999999998 899998863                   3667777778888888888888


Q ss_pred             EccCCCHHHHHHHHHHHhhcCCCeeEEEEccc
Q 021391           86 ELDVSSLASVRKFASEYNSQGRPLNILINNAG  117 (313)
Q Consensus        86 ~~D~s~~~~v~~~~~~~~~~~g~id~lv~~ag  117 (313)
                      ..++++...+.       . +...|+||.+..
T Consensus       194 ~~~i~~~~~~~-------~-~~~~DlVvd~~D  217 (353)
T 3h5n_A          194 ALNINDYTDLH-------K-VPEADIWVVSAD  217 (353)
T ss_dssp             ECCCCSGGGGG-------G-SCCCSEEEECCC
T ss_pred             ecccCchhhhh-------H-hccCCEEEEecC
Confidence            88888765322       2 457899998763

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.15  E-value=0.0033  Score=57.55  Aligned_cols=80  Identities=21%  Similarity=0.259  Sum_probs=53.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcC-CEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCC--CHHHHHHHHHHHhh
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRG-VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS--SLASVRKFASEYNS  104 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s--~~~~v~~~~~~~~~  104 (313)
                      .|+++||+| +|++|...++.+...| ++|+.++++.++.+.+. ++     +.. .+  +|..  +.+++.+.+.++..
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~-~v--i~~~~~~~~~~~~~v~~~~~  264 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EI-----GAD-LT--LNRRETSVEERRKAIMDITH  264 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HT-----TCS-EE--EETTTSCHHHHHHHHHHHTT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-Hc-----CCc-EE--EeccccCcchHHHHHHHHhC
Confidence            589999999 8999999999888899 59999999987765433 22     222 12  2333  23333333332211


Q ss_pred             cCCCeeEEEEcccC
Q 021391          105 QGRPLNILINNAGI  118 (313)
Q Consensus       105 ~~g~id~lv~~ag~  118 (313)
                       ..++|++|.++|.
T Consensus       265 -g~g~Dvvid~~g~  277 (380)
T 1vj0_A          265 -GRGADFILEATGD  277 (380)
T ss_dssp             -TSCEEEEEECSSC
T ss_pred             -CCCCcEEEECCCC
Confidence             1269999999984

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=97.15  E-value=0.012  Score=52.81  Aligned_cols=126  Identities=16%  Similarity=0.125  Sum_probs=73.0

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHh---CC-CCceEEEEccCCCHHHHHHHH
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKE---IP-SAKVDAMELDVSSLASVRKFA   99 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~---~~-~~~~~~~~~D~s~~~~v~~~~   99 (313)
                      |..+.+++.|.|| |.+|.+++..|+..|. +|++.+++++.++.....+...   .. ..++.+ .   +|.+   ..+
T Consensus         5 ~~~~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t---~d~~---ea~   76 (331)
T 1pzg_A            5 LVQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-E---YSYE---AAL   76 (331)
T ss_dssp             CCSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-E---CSHH---HHH
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-e---CCHH---HHh
Confidence            4444568999998 9999999999999998 9999999988777644444332   11 112221 1   2322   122


Q ss_pred             HHHhhcCCCeeEEEEcccCCCCCCccCcc-chhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          100 SEYNSQGRPLNILINNAGIMASPFMLSKD-NIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       100 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~-~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                      +       ..|++|.++|....+...+.. .-...+..|.-    +.+.+.+.+.+.    .+++.++++|-..+
T Consensus        77 ~-------~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~----i~~~i~~~i~~~----~p~a~vi~~tNP~~  136 (331)
T 1pzg_A           77 T-------GADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSK----IIREIGQNIKKY----CPKTFIIVVTNPLD  136 (331)
T ss_dssp             T-------TCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHH----HHHHHHHHHHHH----CTTCEEEECCSSHH
T ss_pred             C-------CCCEEEEccCCCCCCCcccCCCCHHHHHHHHHH----HHHHHHHHHHHH----CCCcEEEEEcCchH
Confidence            2       679999999975433210000 11222333333    344444555443    23566666665544

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.09  E-value=0.013  Score=51.18  Aligned_cols=43  Identities=21%  Similarity=0.192  Sum_probs=37.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHH
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAI   73 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l   73 (313)
                      +++.|.|+ |.+|.++|..|++.|++|++.+|+.+.++...+.+
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i   47 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRF   47 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHH
Confidence            67888876 78999999999999999999999998887766654

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.09  E-value=0.0025  Score=57.89  Aligned_cols=79  Identities=20%  Similarity=0.209  Sum_probs=54.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHc-CCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALR-GVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      -.|.++||+|| |++|...++.+... |++|+.++++.++.+.+. ++     +...   .+|..+.  +.+.+.++.. 
T Consensus       185 ~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~---vi~~~~~--~~~~v~~~~~-  251 (359)
T 1h2b_A          185 YPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RL-----GADH---VVDARRD--PVKQVMELTR-  251 (359)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HT-----TCSE---EEETTSC--HHHHHHHHTT-
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-Hh-----CCCE---EEeccch--HHHHHHHHhC-
Confidence            36899999999 89999999888888 999999999877665442 22     2221   2354443  3333333321 


Q ss_pred             CCCeeEEEEcccC
Q 021391          106 GRPLNILINNAGI  118 (313)
Q Consensus       106 ~g~id~lv~~ag~  118 (313)
                      ..++|++|.++|.
T Consensus       252 g~g~Dvvid~~G~  264 (359)
T 1h2b_A          252 GRGVNVAMDFVGS  264 (359)
T ss_dssp             TCCEEEEEESSCC
T ss_pred             CCCCcEEEECCCC
Confidence            1269999999984

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.09  E-value=0.0022  Score=58.54  Aligned_cols=74  Identities=16%  Similarity=0.287  Sum_probs=54.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .|.++||+|+ |++|..+++.+...|++|++++++.++.+.+. ++     +..   ..+|..+.+.+    +++.   +
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~l-----Ga~---~vi~~~~~~~~----~~~~---~  256 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-AL-----GAD---EVVNSRNADEM----AAHL---K  256 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HH-----TCS---EEEETTCHHHH----HTTT---T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCc---EEeccccHHHH----HHhh---c
Confidence            6899999998 89999999888889999999999888776543 33     322   12455554432    2222   5


Q ss_pred             CeeEEEEcccC
Q 021391          108 PLNILINNAGI  118 (313)
Q Consensus       108 ~id~lv~~ag~  118 (313)
                      ++|++|.++|.
T Consensus       257 g~Dvvid~~g~  267 (369)
T 1uuf_A          257 SFDFILNTVAA  267 (369)
T ss_dssp             CEEEEEECCSS
T ss_pred             CCCEEEECCCC
Confidence            79999999985

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=97.08  E-value=0.0016  Score=59.42  Aligned_cols=81  Identities=25%  Similarity=0.331  Sum_probs=53.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      .|+++||+|+ |++|...++.+...|+ +|++++++.++.+. .+++     +..   ...|.++.+-.+.+.+......
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~-a~~l-----Ga~---~vi~~~~~~~~~~i~~~~~~~~  251 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRL-AEEV-----GAT---ATVDPSAGDVVEAIAGPVGLVP  251 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHH-HHHH-----TCS---EEECTTSSCHHHHHHSTTSSST
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-HHHc-----CCC---EEECCCCcCHHHHHHhhhhccC
Confidence            6899999998 8999999988888999 89999888776553 3333     222   1235555432222211100123


Q ss_pred             CCeeEEEEcccC
Q 021391          107 RPLNILINNAGI  118 (313)
Q Consensus       107 g~id~lv~~ag~  118 (313)
                      +++|++|.++|.
T Consensus       252 gg~Dvvid~~G~  263 (370)
T 4ej6_A          252 GGVDVVIECAGV  263 (370)
T ss_dssp             TCEEEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            489999999973

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.08  E-value=0.0067  Score=54.27  Aligned_cols=121  Identities=12%  Similarity=0.146  Sum_probs=75.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCC--CCceEEEEccCCCHHHHHHHHHHHh
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIP--SAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      |+.+++.|+|+ |.+|.+++..|+..|. .|++.++++++++....++....+  +........+  +.+          
T Consensus         3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~--d~~----------   69 (321)
T 3p7m_A            3 MARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTN--DYK----------   69 (321)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES--CGG----------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcC--CHH----------
Confidence            34578899995 9999999999999988 999999999887766666654210  1112222111  211          


Q ss_pred             hcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          104 SQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                       .+...|++|.++|....+. .+   -...+..|..-    .+.+.+.+.+.    .+++.++++|-...
T Consensus        70 -a~~~aDvVIi~ag~p~k~G-~~---R~dl~~~N~~i----~~~i~~~i~~~----~p~a~vivvtNPvd  126 (321)
T 3p7m_A           70 -DLENSDVVIVTAGVPRKPG-MS---RDDLLGINIKV----MQTVGEGIKHN----CPNAFVICITNPLD  126 (321)
T ss_dssp             -GGTTCSEEEECCSCCCCTT-CC---HHHHHHHHHHH----HHHHHHHHHHH----CTTCEEEECCSSHH
T ss_pred             -HHCCCCEEEEcCCcCCCCC-CC---HHHHHHHhHHH----HHHHHHHHHHH----CCCcEEEEecCchH
Confidence             1236899999999754432 22   22334455544    44444444443    34678888876554

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.08  E-value=0.001  Score=60.41  Aligned_cols=74  Identities=15%  Similarity=0.237  Sum_probs=53.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCH-HHHHHHHHHHhhcC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSL-ASVRKFASEYNSQG  106 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~-~~v~~~~~~~~~~~  106 (313)
                      .|+++||+|+ |++|..+++.+...|++|+.++++.++.+.+. ++     +... +  .|..+. +    +.+++.   
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~-v--~~~~~~~~----~~~~~~---  241 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KM-----GADH-Y--IATLEEGD----WGEKYF---  241 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HH-----TCSE-E--EEGGGTSC----HHHHSC---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-Hc-----CCCE-E--EcCcCchH----HHHHhh---
Confidence            6899999999 99999999988889999999999888766543 23     3222 2  233332 2    122222   


Q ss_pred             CCeeEEEEcccC
Q 021391          107 RPLNILINNAGI  118 (313)
Q Consensus       107 g~id~lv~~ag~  118 (313)
                      +++|++|.++|.
T Consensus       242 ~~~D~vid~~g~  253 (360)
T 1piw_A          242 DTFDLIVVCASS  253 (360)
T ss_dssp             SCEEEEEECCSC
T ss_pred             cCCCEEEECCCC
Confidence            589999999985

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.07  E-value=0.0014  Score=59.72  Aligned_cols=76  Identities=14%  Similarity=0.238  Sum_probs=51.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHH-cCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc-
Q 021391           28 TGLTAIVTGASSGIGTETARVLAL-RGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ-  105 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~-~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~-  105 (313)
                      .|+++||+||+|++|...++.+.. .|++|+.++++.++.+.+. ++     +...   ..|-.+  .   +.+++.+. 
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~-~l-----Gad~---vi~~~~--~---~~~~v~~~~  236 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK-SL-----GAHH---VIDHSK--P---LAAEVAALG  236 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH-HT-----TCSE---EECTTS--C---HHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH-Hc-----CCCE---EEeCCC--C---HHHHHHHhc
Confidence            689999999999999887766555 5889999999877665442 22     2221   234333  1   23333332 


Q ss_pred             CCCeeEEEEccc
Q 021391          106 GRPLNILINNAG  117 (313)
Q Consensus       106 ~g~id~lv~~ag  117 (313)
                      .+++|+++.++|
T Consensus       237 ~~g~Dvvid~~g  248 (363)
T 4dvj_A          237 LGAPAFVFSTTH  248 (363)
T ss_dssp             SCCEEEEEECSC
T ss_pred             CCCceEEEECCC
Confidence            347999999997

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.06  E-value=0.0078  Score=54.33  Aligned_cols=124  Identities=15%  Similarity=0.040  Sum_probs=74.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-------EEEEEecCch--hHHHHHHHHHHhCCCCceEEEEccCCCHHHHH
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGV-------HVIMAVRNMA--AGKDVREAIVKEIPSAKVDAMELDVSSLASVR   96 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~-------~V~l~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~   96 (313)
                      +++.-+|.|+||+|+||..++..|++...       .+.|.+.++.  .++...-++..............+  +.   .
T Consensus        21 s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~--~~---~   95 (345)
T 4h7p_A           21 SMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTA--DP---R   95 (345)
T ss_dssp             -CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEES--CH---H
T ss_pred             CCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcC--Ch---H
Confidence            35567899999999999999999998643       6899997653  345555556553212222222221  22   1


Q ss_pred             HHHHHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391           97 KFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus        97 ~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                      .       .+...|++|.++|....+. .+   -++.++.|..=    .+.+.+.+.+.+   .++..|+++|-..
T Consensus        96 ~-------a~~~advVvi~aG~prkpG-mt---R~DLl~~Na~I----~~~~~~~i~~~a---~~~~~vlvvsNPv  153 (345)
T 4h7p_A           96 V-------AFDGVAIAIMCGAFPRKAG-ME---RKDLLEMNARI----FKEQGEAIAAVA---ASDCRVVVVGNPA  153 (345)
T ss_dssp             H-------HTTTCSEEEECCCCCCCTT-CC---HHHHHHHHHHH----HHHHHHHHHHHS---CTTCEEEECSSSH
T ss_pred             H-------HhCCCCEEEECCCCCCCCC-CC---HHHHHHHhHHH----HHHHHHHHHhhc---cCceEEEEeCCCc
Confidence            1       1347899999999865542 23   33446666554    445555555532   2345677777653

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=97.06  E-value=0.0018  Score=59.89  Aligned_cols=43  Identities=16%  Similarity=0.045  Sum_probs=38.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHH
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDV   69 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~   69 (313)
                      .+.|++++|+|+ |.+|..+++.+...|++|++++++.+..+..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            468999999996 8999999999999999999999998876654

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=97.03  E-value=0.0012  Score=59.98  Aligned_cols=76  Identities=17%  Similarity=0.190  Sum_probs=51.8

Q ss_pred             CCCCEEEEeCCCCchHHHH-HHHH-HHcCCE-EEEEecCch---hHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHH
Q 021391           27 GTGLTAIVTGASSGIGTET-ARVL-ALRGVH-VIMAVRNMA---AGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFAS  100 (313)
Q Consensus        27 ~~gk~~lItGas~giG~ai-a~~L-a~~G~~-V~l~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~  100 (313)
                      ++++++||+|| |++|... ++.+ ...|++ |+.++++.+   +.+.+ +++     +.  ..+  |..+.+ +.+ +.
T Consensus       171 ~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~-~~l-----Ga--~~v--~~~~~~-~~~-i~  237 (357)
T 2b5w_A          171 WDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII-EEL-----DA--TYV--DSRQTP-VED-VP  237 (357)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH-HHT-----TC--EEE--ETTTSC-GGG-HH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH-HHc-----CC--ccc--CCCccC-HHH-HH
Confidence            44599999999 9999998 7666 567997 999999877   65543 222     22  233  555433 223 44


Q ss_pred             HHhhcCCCeeEEEEcccC
Q 021391          101 EYNSQGRPLNILINNAGI  118 (313)
Q Consensus       101 ~~~~~~g~id~lv~~ag~  118 (313)
                      ++   .+++|++|.+.|.
T Consensus       238 ~~---~gg~Dvvid~~g~  252 (357)
T 2b5w_A          238 DV---YEQMDFIYEATGF  252 (357)
T ss_dssp             HH---SCCEEEEEECSCC
T ss_pred             Hh---CCCCCEEEECCCC
Confidence            44   2479999999983

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=97.02  E-value=0.0047  Score=55.63  Aligned_cols=77  Identities=16%  Similarity=0.225  Sum_probs=52.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHc--CCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           28 TGLTAIVTGASSGIGTETARVLALR--GVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~--G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      .|+++||+|| |++|...++.+...  |++|+.++++.++.+.+. ++     +... +  .|..+.   ...++++.. 
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~-v--i~~~~~---~~~~~~~~~-  235 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-EL-----GADY-V--SEMKDA---ESLINKLTD-  235 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HH-----TCSE-E--ECHHHH---HHHHHHHHT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-Hh-----CCCE-E--eccccc---hHHHHHhhc-
Confidence            7999999999 89999999888888  999999999887765443 33     2221 1  232220   122333332 


Q ss_pred             CCCeeEEEEcccC
Q 021391          106 GRPLNILINNAGI  118 (313)
Q Consensus       106 ~g~id~lv~~ag~  118 (313)
                      ..++|++|.++|.
T Consensus       236 g~g~D~vid~~g~  248 (344)
T 2h6e_A          236 GLGASIAIDLVGT  248 (344)
T ss_dssp             TCCEEEEEESSCC
T ss_pred             CCCccEEEECCCC
Confidence            2379999999983

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.01  E-value=0.0013  Score=59.77  Aligned_cols=75  Identities=17%  Similarity=0.258  Sum_probs=53.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .|.++||+|+ |++|...++.+...|++|++++++.++.+.+.+++     +...   ..|..+.+.+       .+..+
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~l-----Ga~~---vi~~~~~~~~-------~~~~~  243 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDL-----GADD---YVIGSDQAKM-------SELAD  243 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTS-----CCSC---EEETTCHHHH-------HHSTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHc-----CCce---eeccccHHHH-------HHhcC
Confidence            7899999995 99999999988889999999999887765443222     2221   2344454322       22234


Q ss_pred             CeeEEEEcccC
Q 021391          108 PLNILINNAGI  118 (313)
Q Consensus       108 ~id~lv~~ag~  118 (313)
                      ++|++|.++|.
T Consensus       244 g~D~vid~~g~  254 (357)
T 2cf5_A          244 SLDYVIDTVPV  254 (357)
T ss_dssp             TEEEEEECCCS
T ss_pred             CCCEEEECCCC
Confidence            79999999984

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.00  E-value=0.0012  Score=58.00  Aligned_cols=46  Identities=13%  Similarity=0.178  Sum_probs=40.7

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHH
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVR   70 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~   70 (313)
                      ..+++||++||.|+ ||.|++++..|++.|+ +|+++.|+.++++++.
T Consensus       117 ~~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La  163 (282)
T 3fbt_A          117 RVEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIY  163 (282)
T ss_dssp             TCCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHC
T ss_pred             CCCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence            56789999999998 6999999999999999 8999999988766554

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.99  E-value=0.0012  Score=59.79  Aligned_cols=70  Identities=19%  Similarity=0.253  Sum_probs=51.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      -.|.++||+|+ |++|...++.+...|++|++++++.++.+.+. ++     +....+     ++.+.+.+         
T Consensus       175 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~v~-----~~~~~~~~---------  233 (348)
T 3two_A          175 TKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDAL-SM-----GVKHFY-----TDPKQCKE---------  233 (348)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHH-HT-----TCSEEE-----SSGGGCCS---------
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-hc-----CCCeec-----CCHHHHhc---------
Confidence            36899999997 89999999888889999999999988776443 22     322222     34332211         


Q ss_pred             CCeeEEEEcccC
Q 021391          107 RPLNILINNAGI  118 (313)
Q Consensus       107 g~id~lv~~ag~  118 (313)
                       ++|++|.+.|.
T Consensus       234 -~~D~vid~~g~  244 (348)
T 3two_A          234 -ELDFIISTIPT  244 (348)
T ss_dssp             -CEEEEEECCCS
T ss_pred             -CCCEEEECCCc
Confidence             79999999984

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.97  E-value=0.0026  Score=58.08  Aligned_cols=79  Identities=16%  Similarity=0.143  Sum_probs=53.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      -.|+++||+||+|++|...++.+...|++|+.+. +.++.+ ..+++     +..   ..+|..+.+-.+ .+.++  ..
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~-~~~~l-----Ga~---~vi~~~~~~~~~-~v~~~--t~  229 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD-LAKSR-----GAE---EVFDYRAPNLAQ-TIRTY--TK  229 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH-HHHHT-----TCS---EEEETTSTTHHH-HHHHH--TT
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH-HHHHc-----CCc---EEEECCCchHHH-HHHHH--cc
Confidence            4789999999999999999999999999999886 555544 33332     222   123444443222 22222  12


Q ss_pred             CCeeEEEEcccC
Q 021391          107 RPLNILINNAGI  118 (313)
Q Consensus       107 g~id~lv~~ag~  118 (313)
                      +++|++|.+.|.
T Consensus       230 g~~d~v~d~~g~  241 (371)
T 3gqv_A          230 NNLRYALDCITN  241 (371)
T ss_dssp             TCCCEEEESSCS
T ss_pred             CCccEEEECCCc
Confidence            469999999984

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=96.96  E-value=0.011  Score=52.26  Aligned_cols=118  Identities=11%  Similarity=0.059  Sum_probs=73.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHhC--CCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           30 LTAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKEI--PSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      +++.|+|| |.+|.+++..|+..|.  .|++.+++++.++....++....  ..........  +|.+.           
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~a-----------   66 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSL-----------   66 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGGG-----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHHH-----------
Confidence            36889999 9999999999999998  89999999987764444444321  0111222211  12211           


Q ss_pred             CCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          106 GRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                      ...-|++|.++|....+. .+   -...+..|.    .+.+.+.+.+.+.    .+++.++++|....
T Consensus        67 ~~~aDiVViaag~~~kpG-~~---R~dl~~~N~----~i~~~i~~~i~~~----~p~a~iivvsNPvd  122 (294)
T 1oju_A           67 LKGSEIIVVTAGLARKPG-MT---RLDLAHKNA----GIIKDIAKKIVEN----APESKILVVTNPMD  122 (294)
T ss_dssp             GTTCSEEEECCCCCCCSS-CC---HHHHHHHHH----HHHHHHHHHHHTT----STTCEEEECSSSHH
T ss_pred             hCCCCEEEECCCCCCCCC-Cc---HHHHHHHHH----HHHHHHHHHHHhh----CCCeEEEEeCCcch
Confidence            236899999999754332 12   223344453    3455555555553    44788888887654

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.94  E-value=0.0017  Score=58.00  Aligned_cols=74  Identities=15%  Similarity=0.279  Sum_probs=50.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      -.|.++||+||+|++|...++.+...|++|+.++++. + .+..+++     +...   ..|..+.+.+.       +..
T Consensus       151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~-~~~~~~l-----Ga~~---~i~~~~~~~~~-------~~~  213 (321)
T 3tqh_A          151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-N-HAFLKAL-----GAEQ---CINYHEEDFLL-------AIS  213 (321)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-H-HHHHHHH-----TCSE---EEETTTSCHHH-------HCC
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-h-HHHHHHc-----CCCE---EEeCCCcchhh-------hhc
Confidence            3789999999999999999999999999999988543 3 2333333     2221   23444433221       122


Q ss_pred             CCeeEEEEccc
Q 021391          107 RPLNILINNAG  117 (313)
Q Consensus       107 g~id~lv~~ag  117 (313)
                      .++|+++.+.|
T Consensus       214 ~g~D~v~d~~g  224 (321)
T 3tqh_A          214 TPVDAVIDLVG  224 (321)
T ss_dssp             SCEEEEEESSC
T ss_pred             cCCCEEEECCC
Confidence            47999999998

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=96.94  E-value=0.0026  Score=61.42  Aligned_cols=62  Identities=15%  Similarity=0.258  Sum_probs=52.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCc-------------------hhHHHHHHHHHHhCCCCceEEEE
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNM-------------------AAGKDVREAIVKEIPSAKVDAME   86 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~   86 (313)
                      +++++|+|.|+ ||+|..+++.|+..|. ++.+++++.                   .+.+.+.+.+.+.+|..++..+.
T Consensus       324 L~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~~  402 (615)
T 4gsl_A          324 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVK  402 (615)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEEC
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEee
Confidence            67899999988 6999999999999998 899998864                   57788888888888877888777


Q ss_pred             ccC
Q 021391           87 LDV   89 (313)
Q Consensus        87 ~D~   89 (313)
                      .++
T Consensus       403 ~~I  405 (615)
T 4gsl_A          403 LSI  405 (615)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            665

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.93  E-value=0.0019  Score=59.21  Aligned_cols=81  Identities=19%  Similarity=0.213  Sum_probs=54.5

Q ss_pred             CCCCEEEEeC-CCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           27 GTGLTAIVTG-ASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        27 ~~gk~~lItG-as~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      -.|.++||.| |+|++|...++.+...|++|+.++++.++.+.+. ++     +...   .+|..+.+-.+.+.+.... 
T Consensus       169 ~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~---~~~~~~~~~~~~v~~~t~~-  238 (379)
T 3iup_A          169 LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK-AQ-----GAVH---VCNAASPTFMQDLTEALVS-  238 (379)
T ss_dssp             HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH-HT-----TCSC---EEETTSTTHHHHHHHHHHH-
T ss_pred             cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hC-----CCcE---EEeCCChHHHHHHHHHhcC-
Confidence            4688999997 9999999999988889999999999887766443 22     2221   2344443322222221111 


Q ss_pred             CCCeeEEEEcccC
Q 021391          106 GRPLNILINNAGI  118 (313)
Q Consensus       106 ~g~id~lv~~ag~  118 (313)
                       .++|++|.+.|.
T Consensus       239 -~g~d~v~d~~g~  250 (379)
T 3iup_A          239 -TGATIAFDATGG  250 (379)
T ss_dssp             -HCCCEEEESCEE
T ss_pred             -CCceEEEECCCc
Confidence             269999999984

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.86  E-value=0.017  Score=51.79  Aligned_cols=123  Identities=12%  Similarity=0.185  Sum_probs=76.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHhCC-CCceEEEEccCCCHHHHHHHHHH
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKEIP-SAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      ++-+.+++.|+|| |.+|..++..|+..+.  .|++.+++.++++....++....+ ...+.+.. |  +.+        
T Consensus         5 ~~~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~~~--------   72 (326)
T 2zqz_A            5 TDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--EYS--------   72 (326)
T ss_dssp             -CCCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGG--------
T ss_pred             ccCCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--CHH--------
Confidence            3445578999999 9999999999999886  799999998888776666654321 11222222 2  211        


Q ss_pred             HhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccc
Q 021391          102 YNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHR  174 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~  174 (313)
                         .+...|++|..+|....+. .+.   ...+..|.-    +++.+.+.+.+.    .+++.|+++|-....
T Consensus        73 ---a~~~aDvVii~ag~~~k~g-~~R---~dl~~~n~~----i~~~i~~~i~~~----~p~a~iiv~tNPv~~  130 (326)
T 2zqz_A           73 ---DAKDADLVVITAGAPQKPG-ETR---LDLVNKNLK----ILKSIVDPIVDS----GFNGIFLVAANPVDI  130 (326)
T ss_dssp             ---GGGGCSEEEECCCCC------CH---HHHHHHHHH----HHHHHHHHHHHH----TCCSEEEECSSSHHH
T ss_pred             ---HhCCCCEEEEcCCCCCCCC-CCH---HHHHHHHHH----HHHHHHHHHHHH----CCCeEEEEeCCcHHH
Confidence               1236899999999754332 122   223334433    445555555554    347889988776543

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=96.82  E-value=0.0013  Score=55.86  Aligned_cols=72  Identities=18%  Similarity=0.146  Sum_probs=55.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      .+.++|.|+ |.+|+.+++.|.++|+ |++++++++..+...         ..+.++..|.++++.++++      ....
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~---------~~~~~i~gd~~~~~~l~~a------~i~~   71 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR---------SGANFVHGDPTRVSDLEKA------NVRG   71 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH---------TTCEEEESCTTCHHHHHHT------TCTT
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh---------cCCeEEEcCCCCHHHHHhc------Ccch
Confidence            357888897 8999999999999999 999999987655432         1377899999998765443      1236


Q ss_pred             eeEEEEccc
Q 021391          109 LNILINNAG  117 (313)
Q Consensus       109 id~lv~~ag  117 (313)
                      .|.+|.+.+
T Consensus        72 ad~vi~~~~   80 (234)
T 2aef_A           72 ARAVIVDLE   80 (234)
T ss_dssp             CSEEEECCS
T ss_pred             hcEEEEcCC
Confidence            788888764

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=96.78  E-value=0.03  Score=49.81  Aligned_cols=119  Identities=16%  Similarity=0.109  Sum_probs=71.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc-C--CEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           30 LTAIVTGASSGIGTETARVLALR-G--VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~-G--~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      ++|.|+||+|.+|.+++..|+.+ +  ..++++++++ +.+....++...  ..........-++.   ...+       
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~--~~~~~v~~~~~~~~---~~~~-------   67 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHI--PTAVKIKGFSGEDA---TPAL-------   67 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTS--CSSEEEEEECSSCC---HHHH-------
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCC--CCCceEEEecCCCc---HHHh-------
Confidence            36889999999999999999886 5  3799999987 444444455432  11222221100121   1112       


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                      ...|++|.++|....+.    ..-.+.++.|..-...+.+.+    .+.    .+++.++++|-...
T Consensus        68 ~~aDivii~ag~~rkpG----~~R~dll~~N~~I~~~i~~~i----~~~----~p~a~vlvvtNPvd  122 (312)
T 3hhp_A           68 EGADVVLISAGVARKPG----MDRSDLFNVNAGIVKNLVQQV----AKT----CPKACIGIITNPVN  122 (312)
T ss_dssp             TTCSEEEECCSCSCCTT----CCHHHHHHHHHHHHHHHHHHH----HHH----CTTSEEEECSSCHH
T ss_pred             CCCCEEEEeCCCCCCCC----CCHHHHHHHHHHHHHHHHHHH----HHH----CCCcEEEEecCcch
Confidence            36899999999754332    223445666665544444444    443    34678888887543

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=96.75  E-value=0.0031  Score=60.76  Aligned_cols=63  Identities=14%  Similarity=0.229  Sum_probs=52.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecC-------------------chhHHHHHHHHHHhCCCCceEEE
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRN-------------------MAAGKDVREAIVKEIPSAKVDAM   85 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~   85 (313)
                      .+++++|+|.|+ ||+|..+++.|+..|. ++.++|.+                   ..+++.+.+.+.+.+|..++..+
T Consensus       324 kL~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~~  402 (598)
T 3vh1_A          324 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  402 (598)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEEE
Confidence            467899999986 5899999999999998 79999765                   25788888888888887777777


Q ss_pred             EccC
Q 021391           86 ELDV   89 (313)
Q Consensus        86 ~~D~   89 (313)
                      ..++
T Consensus       403 ~~~I  406 (598)
T 3vh1_A          403 KLSI  406 (598)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            7665

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.74  E-value=0.0044  Score=53.56  Aligned_cols=42  Identities=21%  Similarity=0.330  Sum_probs=36.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHH
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDV   69 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~   69 (313)
                      +++| +++|.|+ ||.|++++..|++.|+ +|++++|+.++++++
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~l  148 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKAL  148 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTC
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence            4678 9999997 8999999999999999 899999998765543

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.73  E-value=0.024  Score=50.51  Aligned_cols=120  Identities=10%  Similarity=0.130  Sum_probs=74.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHhCC--CCceEEEEccCCCHHHHHHHHHHH
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKEIP--SAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      ++.+++.|+|| |.+|..++..|+..|.  .|++.++++++++.....+....+  +..+.+.. |  +.+         
T Consensus         4 m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~~~---------   70 (317)
T 3d0o_A            4 FKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--EYS---------   70 (317)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--CGG---------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--CHH---------
Confidence            35578999999 9999999999999884  899999998777655555544221  12222222 2  211         


Q ss_pred             hhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          103 NSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                        .+...|++|.++|....+. .+   ....+..|.-    +++.+.+.+.+.    .+++.|+++|-...
T Consensus        71 --a~~~aDvVvi~ag~~~~~g-~~---r~dl~~~n~~----i~~~i~~~i~~~----~p~a~viv~tNPv~  127 (317)
T 3d0o_A           71 --DCHDADLVVICAGAAQKPG-ET---RLDLVSKNLK----IFKSIVGEVMAS----KFDGIFLVATNPVD  127 (317)
T ss_dssp             --GGTTCSEEEECCCCCCCTT-CC---HHHHHHHHHH----HHHHHHHHHHHT----TCCSEEEECSSSHH
T ss_pred             --HhCCCCEEEECCCCCCCCC-Cc---HHHHHHHHHH----HHHHHHHHHHHh----CCCcEEEEecCcHH
Confidence              1237899999999754332 11   1223334433    445555555553    34678888776554

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.73  E-value=0.00073  Score=60.58  Aligned_cols=41  Identities=29%  Similarity=0.452  Sum_probs=36.0

Q ss_pred             CC-EEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHH
Q 021391           29 GL-TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDV   69 (313)
Q Consensus        29 gk-~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~   69 (313)
                      |+ ++||+||+|++|..+++.+...|++|+.++++.++.+.+
T Consensus       150 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~  191 (330)
T 1tt7_A          150 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL  191 (330)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             CCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            44 899999999999999999889999999999987776544

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.70  E-value=0.0034  Score=57.39  Aligned_cols=79  Identities=9%  Similarity=0.094  Sum_probs=53.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCC-HHHHHHHHHHHhhc
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSS-LASVRKFASEYNSQ  105 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~-~~~v~~~~~~~~~~  105 (313)
                      .|.+|||+|+ |++|...++.+...|+ +|++++++.++.+.+ +++     +...   .+|..+ .+.+.+.+.++.  
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a-~~l-----Ga~~---vi~~~~~~~~~~~~i~~~~--  260 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA-KKF-----GVNE---FVNPKDHDKPIQEVIVDLT--  260 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH-HTT-----TCCE---EECGGGCSSCHHHHHHHHT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc-----CCcE---EEccccCchhHHHHHHHhc--
Confidence            6899999998 9999999988888999 899999998876643 222     2221   234332 122333333332  


Q ss_pred             CCCeeEEEEcccC
Q 021391          106 GRPLNILINNAGI  118 (313)
Q Consensus       106 ~g~id~lv~~ag~  118 (313)
                      .+++|++|.++|.
T Consensus       261 ~gg~D~vid~~g~  273 (378)
T 3uko_A          261 DGGVDYSFECIGN  273 (378)
T ss_dssp             TSCBSEEEECSCC
T ss_pred             CCCCCEEEECCCC
Confidence            2379999999984

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.68  E-value=0.0045  Score=54.79  Aligned_cols=44  Identities=25%  Similarity=0.231  Sum_probs=38.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHH
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKD   68 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~   68 (313)
                      ..++.|++++|.|+ |+||+++++.|...|++|++.+|+.++.+.
T Consensus       152 ~~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~  195 (300)
T 2rir_A          152 DYTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLAR  195 (300)
T ss_dssp             SSCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence            46789999999996 899999999999999999999999765443

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.67  E-value=0.0063  Score=55.36  Aligned_cols=78  Identities=13%  Similarity=0.141  Sum_probs=51.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      .|+++||+|+ |++|...++.+...|+ +|+.++++.++.+.+ +++     +... +  +|..+.+-.+. +.++  ..
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a-~~l-----Ga~~-v--i~~~~~~~~~~-~~~~--~~  256 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQL-----GATH-V--INSKTQDPVAA-IKEI--TD  256 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHH-----TCSE-E--EETTTSCHHHH-HHHH--TT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHc-----CCCE-E--ecCCccCHHHH-HHHh--cC
Confidence            6899999995 8999999988888899 699999987766544 333     2221 2  24333322222 2222  12


Q ss_pred             CCeeEEEEcccC
Q 021391          107 RPLNILINNAGI  118 (313)
Q Consensus       107 g~id~lv~~ag~  118 (313)
                      +++|++|.++|.
T Consensus       257 gg~D~vid~~g~  268 (371)
T 1f8f_A          257 GGVNFALESTGS  268 (371)
T ss_dssp             SCEEEEEECSCC
T ss_pred             CCCcEEEECCCC
Confidence            379999999983

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.63  E-value=0.0047  Score=56.31  Aligned_cols=79  Identities=16%  Similarity=0.155  Sum_probs=53.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCH-HHHHHHHHHHhhc
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSL-ASVRKFASEYNSQ  105 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~-~~v~~~~~~~~~~  105 (313)
                      .|++|||+|+ |++|...++.+...|+ +|+.++++.++.+.+. ++     +...   .+|..+. +++.+.+.++.  
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~~---vi~~~~~~~~~~~~i~~~t--  258 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-EL-----GATE---CLNPKDYDKPIYEVICEKT--  258 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HT-----TCSE---EECGGGCSSCHHHHHHHHT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-Hc-----CCcE---EEecccccchHHHHHHHHh--
Confidence            6899999996 8999999988888899 8999999887766442 22     2221   2333321 12333333332  


Q ss_pred             CCCeeEEEEcccC
Q 021391          106 GRPLNILINNAGI  118 (313)
Q Consensus       106 ~g~id~lv~~ag~  118 (313)
                      .+++|++|.++|.
T Consensus       259 ~gg~Dvvid~~g~  271 (373)
T 1p0f_A          259 NGGVDYAVECAGR  271 (373)
T ss_dssp             TSCBSEEEECSCC
T ss_pred             CCCCCEEEECCCC
Confidence            2479999999984

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.63  E-value=0.0048  Score=55.93  Aligned_cols=38  Identities=26%  Similarity=0.434  Sum_probs=32.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchh
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAA   65 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~   65 (313)
                      .|.++||+||+|++|...++.+...|++|+.+.+..++
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~  204 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPD  204 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSC
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccc
Confidence            68999999999999999988887889998888765443

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.63  E-value=0.006  Score=56.07  Aligned_cols=80  Identities=21%  Similarity=0.201  Sum_probs=53.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      .|+++||.|+ |++|...++.+...|+ +|++++++.++.+.+ +++     +.  ..  +|.++.+.+.+.+.++. ..
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a-~~l-----Ga--~~--i~~~~~~~~~~~v~~~t-~g  252 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA-KAQ-----GF--EI--ADLSLDTPLHEQIAALL-GE  252 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHT-----TC--EE--EETTSSSCHHHHHHHHH-SS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH-HHc-----CC--cE--EccCCcchHHHHHHHHh-CC
Confidence            6899999995 9999999888888899 799999987776544 222     33  22  35444332222222221 12


Q ss_pred             CCeeEEEEcccCC
Q 021391          107 RPLNILINNAGIM  119 (313)
Q Consensus       107 g~id~lv~~ag~~  119 (313)
                      .++|++|.++|..
T Consensus       253 ~g~Dvvid~~G~~  265 (398)
T 1kol_A          253 PEVDCAVDAVGFE  265 (398)
T ss_dssp             SCEEEEEECCCTT
T ss_pred             CCCCEEEECCCCc
Confidence            3699999999853

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.62  E-value=0.006  Score=56.12  Aligned_cols=79  Identities=19%  Similarity=0.222  Sum_probs=52.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      .|.++||.|+ |++|...++.+...|+ +|+.++++.++.+.+. +    . +.  ..  +|..+.+...+.+.++. ..
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~----l-Ga--~~--i~~~~~~~~~~~~~~~~-~g  252 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLS-D----A-GF--ET--IDLRNSAPLRDQIDQIL-GK  252 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-T----T-TC--EE--EETTSSSCHHHHHHHHH-SS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-H----c-CC--cE--EcCCCcchHHHHHHHHh-CC
Confidence            6899999997 9999999888888899 8999999987665432 2    1 33  33  35444322111122221 11


Q ss_pred             CCeeEEEEcccC
Q 021391          107 RPLNILINNAGI  118 (313)
Q Consensus       107 g~id~lv~~ag~  118 (313)
                      .++|++|.++|.
T Consensus       253 ~g~Dvvid~~g~  264 (398)
T 2dph_A          253 PEVDCGVDAVGF  264 (398)
T ss_dssp             SCEEEEEECSCT
T ss_pred             CCCCEEEECCCC
Confidence            269999999985

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=96.62  E-value=0.026  Score=50.40  Aligned_cols=118  Identities=12%  Similarity=0.137  Sum_probs=73.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHhCC-CCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           30 LTAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKEIP-SAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      +++.|+|| |.+|.+++..|+..+.  .|++.+++.++++....++....+ ...+.+.. |  +.           +.+
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~~-----------~a~   70 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--EY-----------SDC   70 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--CG-----------GGG
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--CH-----------HHh
Confidence            58999999 9999999999999886  899999998888876777765421 11222222 2  11           123


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccc
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHR  174 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~  174 (313)
                      ...|++|..+|....+. .+.+   ..+..|.-    +++.+.+.+.+.    ..++.|+++|-....
T Consensus        71 ~~aDvVii~ag~~~~~g-~~R~---dl~~~n~~----i~~~i~~~i~~~----~p~a~iiv~tNPv~~  126 (318)
T 1ez4_A           71 KDADLVVITAGAPQKPG-ESRL---DLVNKNLN----ILSSIVKPVVDS----GFDGIFLVAANPVDI  126 (318)
T ss_dssp             TTCSEEEECCCC--------------CHHHHHH----HHHHHHHHHHHT----TCCSEEEECSSSHHH
T ss_pred             CCCCEEEECCCCCCCCC-CCHH---HHHHHHHH----HHHHHHHHHHHh----CCCeEEEEeCCcHHH
Confidence            47899999999754332 1221   22333333    455555555554    457888888776543

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=96.58  E-value=0.016  Score=51.76  Aligned_cols=119  Identities=16%  Similarity=0.133  Sum_probs=68.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHhCCC-CceEEEEccCCCHHHHHHHHHHHhh
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKEIPS-AKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      +.+++.|+|+ |.+|..++..|+..|.  .|++.+.+.++++.....+....+- ..+.+. .  .+.           +
T Consensus         6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~~-----------~   70 (318)
T 1y6j_A            6 SRSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GDY-----------S   70 (318)
T ss_dssp             -CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CG-----------G
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CCH-----------H
Confidence            3467899998 9999999999999987  8999999987766555555433110 111111 1  111           1


Q ss_pred             cCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          105 QGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                      .+...|++|.++|....+. .+   -...+..|+--...+.+.+.++        .+++.|+++|-...
T Consensus        71 a~~~aDvVii~~g~p~k~g-~~---r~dl~~~n~~i~~~i~~~i~~~--------~p~a~viv~tNPv~  127 (318)
T 1y6j_A           71 DVKDCDVIVVTAGANRKPG-ET---RLDLAKKNVMIAKEVTQNIMKY--------YNHGVILVVSNPVD  127 (318)
T ss_dssp             GGTTCSEEEECCCC-------C---HHHHHHHHHHHHHHHHHHHHHH--------CCSCEEEECSSSHH
T ss_pred             HhCCCCEEEEcCCCCCCCC-cC---HHHHHHhhHHHHHHHHHHHHHh--------CCCcEEEEecCcHH
Confidence            2347899999998753321 11   2233455555444444444433        33678888766554

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=96.58  E-value=0.041  Score=48.90  Aligned_cols=117  Identities=16%  Similarity=0.191  Sum_probs=74.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC--CEEEEEecCchhHHHHHHHHHHhCC-CCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           30 LTAIVTGASSGIGTETARVLALRG--VHVIMAVRNMAAGKDVREAIVKEIP-SAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G--~~V~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      +++.|+|| |.+|.+++..|+..+  ..|++.+++.++++....++....+ ...+.+.. |  +.+.           +
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~~a-----------~   65 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SYGD-----------L   65 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CHHH-----------h
Confidence            46889998 999999999999987  4899999998888876666655321 11222222 2  2221           2


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                      ...|++|..+|....+. .+.+   ..+..|.-    +++.+.+.+.+.    ..++.|+++|-...
T Consensus        66 ~~aD~Vii~ag~~~~~g-~~r~---dl~~~n~~----i~~~i~~~i~~~----~p~a~iiv~tNPv~  120 (310)
T 2xxj_A           66 EGARAVVLAAGVAQRPG-ETRL---QLLDRNAQ----VFAQVVPRVLEA----APEAVLLVATNPVD  120 (310)
T ss_dssp             TTEEEEEECCCCCCCTT-CCHH---HHHHHHHH----HHHHHHHHHHHH----CTTCEEEECSSSHH
T ss_pred             CCCCEEEECCCCCCCCC-cCHH---HHHHhhHH----HHHHHHHHHHHH----CCCcEEEEecCchH
Confidence            47899999999754432 2222   23344443    444455555554    34788888877654

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=96.58  E-value=0.034  Score=48.99  Aligned_cols=116  Identities=13%  Similarity=0.079  Sum_probs=75.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHhCC--CCceEEEE-ccCCCHHHHHHHHHHHhhc
Q 021391           31 TAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKEIP--SAKVDAME-LDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~~~--~~~~~~~~-~D~s~~~~v~~~~~~~~~~  105 (313)
                      ++.|+|| |+||..+|..|+.++.  .++|.+.+++..+.....|....+  +....... .|..+              
T Consensus         2 KV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~--------------   66 (294)
T 2x0j_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSL--------------   66 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGG--------------
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHH--------------
Confidence            5778895 9999999999999875  799999998777766666665311  11222222 23211              


Q ss_pred             CCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          106 GRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                      ...-|++|..||....+. .+   -++.++.|..    +.+.+.+.+.++    ..++.++++|-..-
T Consensus        67 ~~~aDvVvitAG~prkpG-mt---R~dLl~~Na~----I~~~i~~~i~~~----~p~aivlvvsNPvd  122 (294)
T 2x0j_A           67 LKGSEIIVVTAGLARKPG-MT---RLDLAHKNAG----IIKDIAKKIVEN----APESKILVVTNPMD  122 (294)
T ss_dssp             GTTCSEEEECCCCCCCSS-SC---HHHHHHHHHH----HHHHHHHHHHTT----STTCEEEECSSSHH
T ss_pred             hCCCCEEEEecCCCCCCC-Cc---hHHHHHHHHH----HHHHHHHHHHhc----CCceEEEEecCcch
Confidence            236899999999865543 23   3344556654    455556666654    34677888877553

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.56  E-value=0.0063  Score=53.65  Aligned_cols=44  Identities=23%  Similarity=0.248  Sum_probs=38.4

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHH
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKD   68 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~   68 (313)
                      ..++.||+++|.|+ |+||+++++.|...|++|++++|+.++.+.
T Consensus       150 ~~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~  193 (293)
T 3d4o_A          150 DFTIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLAR  193 (293)
T ss_dssp             SSCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence            35789999999995 899999999999999999999998765443

>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*

Probab=96.52  E-value=0.0049  Score=57.48  Aligned_cols=80  Identities=20%  Similarity=0.311  Sum_probs=60.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCc-------------------hhHHHHHHHHHHhCCCCceEEEE
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNM-------------------AAGKDVREAIVKEIPSAKVDAME   86 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~   86 (313)
                      +++.+|+|.|+ ||+|..+++.|+..|. ++.+++.+.                   .+++.+.+.+.+.+|..++..+.
T Consensus        38 L~~~~VlvvG~-GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~v~v~~~~  116 (434)
T 1tt5_B           38 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHF  116 (434)
T ss_dssp             HHTCCEEEECS-STHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEE
T ss_pred             hcCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCCCCEEEEEe
Confidence            46789999997 7899999999999998 799987542                   46677777777777777888877


Q ss_pred             ccCCCHHHHHHHHHHHhhcCCCeeEEEEcc
Q 021391           87 LDVSSLASVRKFASEYNSQGRPLNILINNA  116 (313)
Q Consensus        87 ~D~s~~~~v~~~~~~~~~~~g~id~lv~~a  116 (313)
                      .++++..  ..++       ...|+||.+.
T Consensus       117 ~~i~~~~--~~~~-------~~~DlVi~~~  137 (434)
T 1tt5_B          117 NKIQDFN--DTFY-------RQFHIIVCGL  137 (434)
T ss_dssp             SCGGGBC--HHHH-------TTCSEEEECC
T ss_pred             cccchhh--HHHh-------cCCCEEEECC
Confidence            7766532  1222       2578888875

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=96.50  E-value=0.063  Score=47.73  Aligned_cols=117  Identities=15%  Similarity=0.179  Sum_probs=73.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHhCCCC--ceEEEEccCCCHHHHHHHHHHHhh
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKEIPSA--KVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~--~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      .+++.|+|+ |.+|..++..|+..|.  .|++.+++.+.++.....+....+..  .+.+.. |  +.           +
T Consensus         6 ~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~~-----------~   70 (316)
T 1ldn_A            6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--DY-----------D   70 (316)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--CG-----------G
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--cH-----------H
Confidence            368999999 9999999999999885  79999999876665555565543211  222222 1  21           1


Q ss_pred             cCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391          105 QGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                      .+...|++|.++|....+.. +.   ...+..|    .-+.+.+.+.+.+.    .+++.++++|-..
T Consensus        71 al~~aDvViia~~~~~~~g~-~r---~dl~~~n----~~i~~~i~~~i~~~----~p~a~~iv~tNPv  126 (316)
T 1ldn_A           71 DCRDADLVVICAGANQKPGE-TR---LDLVDKN----IAIFRSIVESVMAS----GFQGLFLVATNPV  126 (316)
T ss_dssp             GTTTCSEEEECCSCCCCTTT-CS---GGGHHHH----HHHHHHHHHHHHHH----TCCSEEEECSSSH
T ss_pred             HhCCCCEEEEcCCCCCCCCC-CH---HHHHHcC----hHHHHHHHHHHHHH----CCCCEEEEeCCch
Confidence            23478999999997654432 22   2233444    33555555665554    2356777766544

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.49  E-value=0.009  Score=53.72  Aligned_cols=79  Identities=22%  Similarity=0.306  Sum_probs=50.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHc-CCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALR-GVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      -.|.++||+|+ |++|...++.+... |++|+.++++.++.+.+. ++     +... ++  |-.+ +..+.+ .++. .
T Consensus       170 ~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~-~l-----Ga~~-~i--~~~~-~~~~~v-~~~t-~  236 (345)
T 3jv7_A          170 GPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAR-EV-----GADA-AV--KSGA-GAADAI-RELT-G  236 (345)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHH-HT-----TCSE-EE--ECST-THHHHH-HHHH-G
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hc-----CCCE-EE--cCCC-cHHHHH-HHHh-C
Confidence            46899999998 99999988777667 779999999987766432 22     2222 22  2222 222222 2221 1


Q ss_pred             CCCeeEEEEcccC
Q 021391          106 GRPLNILINNAGI  118 (313)
Q Consensus       106 ~g~id~lv~~ag~  118 (313)
                      ..++|+++.+.|.
T Consensus       237 g~g~d~v~d~~G~  249 (345)
T 3jv7_A          237 GQGATAVFDFVGA  249 (345)
T ss_dssp             GGCEEEEEESSCC
T ss_pred             CCCCeEEEECCCC
Confidence            1279999999984

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=96.48  E-value=0.023  Score=50.59  Aligned_cols=118  Identities=18%  Similarity=0.209  Sum_probs=72.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHhCC--CCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           30 LTAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKEIP--SAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      +++.|+|+ |.+|.+++..|+..|.  .|++.++++++++....++....+  .........|  +.           +.
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~~-----------~a   66 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--DY-----------GP   66 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--SS-----------GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--CH-----------HH
Confidence            36889997 9999999999999987  899999999887765556654211  1122222122  11           12


Q ss_pred             CCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          106 GRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                      +...|++|.++|....+. .+   -...+..|..    +.+.+.+.+.+.    .+++.++++|....
T Consensus        67 ~~~aDvVii~ag~~~kpG-~~---R~dl~~~N~~----i~~~i~~~i~~~----~p~a~vivvtNPvd  122 (314)
T 3nep_X           67 TEDSDVCIITAGLPRSPG-MS---RDDLLAKNTE----IVGGVTEQFVEG----SPDSTIIVVANPLD  122 (314)
T ss_dssp             GTTCSEEEECCCC-----------CHHHHHHHHH----HHHHHHHHHHTT----CTTCEEEECCSSHH
T ss_pred             hCCCCEEEECCCCCCCCC-CC---HHHHHHhhHH----HHHHHHHHHHHh----CCCcEEEecCCchh
Confidence            346899999999754332 12   2233445543    445555555553    34678888887654

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=96.47  E-value=0.017  Score=51.21  Aligned_cols=117  Identities=18%  Similarity=0.175  Sum_probs=64.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHhCC-CCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           30 LTAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKEIP-SAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      +++.|+|| |.+|..++..|+..|.  .|++.+++.++++.....+....+ ........   .+.+           ..
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~~-----------a~   65 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GGHS-----------EL   65 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---ECGG-----------GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CCHH-----------Hh
Confidence            36889998 9999999999999998  999999998766654444433211 01111111   1211           12


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                      ...|++|.++|....+. .+.   ...+..|.--...+.+.+.++        ..++.|+++|-...
T Consensus        66 ~~aDvVIi~~~~~~~~g-~~r---~dl~~~n~~i~~~i~~~i~~~--------~p~~~vi~~tNP~~  120 (304)
T 2v6b_A           66 ADAQVVILTAGANQKPG-ESR---LDLLEKNADIFRELVPQITRA--------APDAVLLVTSNPVD  120 (304)
T ss_dssp             TTCSEEEECC----------------CHHHHHHHHHHHHHHHHHH--------CSSSEEEECSSSHH
T ss_pred             CCCCEEEEcCCCCCCCC-CcH---HHHHHhHHHHHHHHHHHHHHh--------CCCeEEEEecCchH
Confidence            36899999998654322 111   123444544444444444443        22566676665443

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=96.47  E-value=0.0044  Score=55.06  Aligned_cols=68  Identities=6%  Similarity=0.033  Sum_probs=47.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .|.++||+|| |++|...++.+...|++|+.++ +.++.+.+ +++     +... .+  |  |.+       ++   .+
T Consensus       142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~-~~l-----Ga~~-v~--~--d~~-------~v---~~  198 (315)
T 3goh_A          142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALA-AKR-----GVRH-LY--R--EPS-------QV---TQ  198 (315)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHH-HHH-----TEEE-EE--S--SGG-------GC---CS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHH-HHc-----CCCE-EE--c--CHH-------Hh---CC
Confidence            6899999999 9999999988888999999999 76666544 333     3222 22  3  211       11   45


Q ss_pred             CeeEEEEcccC
Q 021391          108 PLNILINNAGI  118 (313)
Q Consensus       108 ~id~lv~~ag~  118 (313)
                      ++|+++.+.|.
T Consensus       199 g~Dvv~d~~g~  209 (315)
T 3goh_A          199 KYFAIFDAVNS  209 (315)
T ss_dssp             CEEEEECC---
T ss_pred             CccEEEECCCc
Confidence            79999999984

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.46  E-value=0.0052  Score=55.96  Aligned_cols=46  Identities=20%  Similarity=0.242  Sum_probs=40.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHH
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREA   72 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~   72 (313)
                      +++||+++|.|+ |.+|..+|+.|.+.|++|++.+++.+++++..++
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~  215 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE  215 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            799999999997 7899999999999999999999998776665554

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.44  E-value=0.0042  Score=54.33  Aligned_cols=41  Identities=29%  Similarity=0.319  Sum_probs=37.2

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM   63 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~   63 (313)
                      ...+++||+++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus       154 ~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t  194 (285)
T 3p2o_A          154 YEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT  194 (285)
T ss_dssp             TTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             hCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc
Confidence            45679999999999999999999999999999999987653

>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A

Probab=96.43  E-value=0.0051  Score=59.89  Aligned_cols=82  Identities=23%  Similarity=0.342  Sum_probs=59.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCc-------------------hhHHHHHHHHHHhCCCCceEEEE
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNM-------------------AAGKDVREAIVKEIPSAKVDAME   86 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~   86 (313)
                      +.+.+|+|.|+ ||+|..+++.|+..|. ++.+++.+.                   .+.+.+.+.+.+.+|..++..+.
T Consensus        15 L~~s~VlVVGa-GGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP~v~V~a~~   93 (640)
T 1y8q_B           15 VAGGRVLVVGA-GGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPKANIVAYH   93 (640)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCTTCEEEEEE
T ss_pred             HhcCeEEEECc-CHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCCCCeEEEEe
Confidence            35688999998 8999999999999998 899988753                   34556666666667777777777


Q ss_pred             ccCCCHHHHHHHHHHHhhcCCCeeEEEEcc
Q 021391           87 LDVSSLASVRKFASEYNSQGRPLNILINNA  116 (313)
Q Consensus        87 ~D~s~~~~v~~~~~~~~~~~g~id~lv~~a  116 (313)
                      .+++.......++       ...|+||.+.
T Consensus        94 ~~i~~~~~~~~~~-------~~~DlVvda~  116 (640)
T 1y8q_B           94 DSIMNPDYNVEFF-------RQFILVMNAL  116 (640)
T ss_dssp             SCTTSTTSCHHHH-------TTCSEEEECC
T ss_pred             cccchhhhhHhhh-------cCCCEEEECC
Confidence            7776532112222       2678888875

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.41  E-value=0.018  Score=52.61  Aligned_cols=43  Identities=16%  Similarity=0.083  Sum_probs=38.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHH
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVR   70 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~   70 (313)
                      +.+++++|.|+ |.+|..+++.+...|++|++++|+.++++.+.
T Consensus       182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~  224 (381)
T 3p2y_A          182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVR  224 (381)
T ss_dssp             ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHH
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            57899999999 79999999999999999999999988777654

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.37  E-value=0.0048  Score=55.75  Aligned_cols=77  Identities=12%  Similarity=0.046  Sum_probs=51.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      .|.++||+|+ |++|...++.+...|+ +|+.++++.++.+.+ +++     +...   ..|..+.+-.    +++.+..
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~l-----Ga~~---vi~~~~~~~~----~~v~~~t  231 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA-LEY-----GATD---IINYKNGDIV----EQILKAT  231 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH-HHH-----TCCE---EECGGGSCHH----HHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHh-----CCce---EEcCCCcCHH----HHHHHHc
Confidence            6899999996 8999999988888999 799999887765533 333     3221   2343333322    2232222


Q ss_pred             --CCeeEEEEcccC
Q 021391          107 --RPLNILINNAGI  118 (313)
Q Consensus       107 --g~id~lv~~ag~  118 (313)
                        .++|++|.+.|.
T Consensus       232 ~g~g~D~v~d~~g~  245 (352)
T 3fpc_A          232 DGKGVDKVVIAGGD  245 (352)
T ss_dssp             TTCCEEEEEECSSC
T ss_pred             CCCCCCEEEECCCC
Confidence              269999999984

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.36  E-value=0.008  Score=55.16  Aligned_cols=43  Identities=16%  Similarity=0.108  Sum_probs=38.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHH
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDV   69 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~   69 (313)
                      .+.|++++|+|+ |++|+++++.+...|++|++++|+..+.+..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~  211 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQV  211 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            568999999996 8999999999999999999999998776654

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.35  E-value=0.0056  Score=56.78  Aligned_cols=58  Identities=19%  Similarity=0.301  Sum_probs=44.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHH
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASV   95 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v   95 (313)
                      +..++|.|. |.+|+.+++.|.++|..|++++++++..+.+.+    .    .+.++..|.++++.+
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~----g~~vi~GDat~~~~L   61 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----F----GMKVFYGDATRMDLL   61 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----T----TCCCEESCTTCHHHH
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----C----CCeEEEcCCCCHHHH
Confidence            356888987 779999999999999999999999887665432    1    244566677666544

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.33  E-value=0.012  Score=50.58  Aligned_cols=77  Identities=13%  Similarity=0.136  Sum_probs=57.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc-CCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           31 TAIVTGASSGIGTETARVLALR-GVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      ++.|.|++|.+|+.+++.+.+. |+.|+.+....+.+++...    .    .. -+..|+|.++.+...++.+.+.  ++
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~----~----~~-DvvIDfT~p~a~~~~~~~a~~~--g~   70 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD----G----NT-EVVIDFTHPDVVMGNLEFLIDN--GI   70 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH----T----TC-CEEEECSCTTTHHHHHHHHHHT--TC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc----c----CC-cEEEEccChHHHHHHHHHHHHc--CC
Confidence            6899999999999999999876 8887765543333443221    1    12 2788999999988888876665  68


Q ss_pred             eEEEEcccC
Q 021391          110 NILINNAGI  118 (313)
Q Consensus       110 d~lv~~ag~  118 (313)
                      ++|+-..|.
T Consensus        71 ~~VigTTG~   79 (245)
T 1p9l_A           71 HAVVGTTGF   79 (245)
T ss_dssp             EEEECCCCC
T ss_pred             CEEEcCCCC
Confidence            899988874

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=96.31  E-value=0.013  Score=55.01  Aligned_cols=82  Identities=17%  Similarity=0.163  Sum_probs=54.7

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      +.++++||+++|.|. |+.|.++|+.|+++|++|.+.+++........+.+.+.  +  +.+....-.+  .   .++  
T Consensus         3 ~~~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~--g--i~~~~g~~~~--~---~~~--   70 (451)
T 3lk7_A            3 TITTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEE--G--IKVVCGSHPL--E---LLD--   70 (451)
T ss_dssp             -CCTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHT--T--CEEEESCCCG--G---GGG--
T ss_pred             chhhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhC--C--CEEEECCChH--H---hhc--
Confidence            446689999999999 78999999999999999999998653322333445443  3  3333222111  0   111  


Q ss_pred             hhcCCCeeEEEEcccCCC
Q 021391          103 NSQGRPLNILINNAGIMA  120 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~  120 (313)
                          +..|.||...|+..
T Consensus        71 ----~~~d~vv~spgi~~   84 (451)
T 3lk7_A           71 ----EDFCYMIKNPGIPY   84 (451)
T ss_dssp             ----SCEEEEEECTTSCT
T ss_pred             ----CCCCEEEECCcCCC
Confidence                13899999999854

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.28  E-value=0.0062  Score=57.35  Aligned_cols=75  Identities=11%  Similarity=0.197  Sum_probs=58.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      .++++|.|+ |-+|+.+|+.|.++|+.|++++++++.++.+.+.+       .+..+..|.++++..+++--      ..
T Consensus         3 ~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-------~~~~i~Gd~~~~~~L~~Agi------~~   68 (461)
T 4g65_A            3 AMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-------DLRVVNGHASHPDVLHEAGA------QD   68 (461)
T ss_dssp             CEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-------SCEEEESCTTCHHHHHHHTT------TT
T ss_pred             cCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-------CcEEEEEcCCCHHHHHhcCC------Cc
Confidence            467888888 58999999999999999999999988877655432       46788999999987655521      25


Q ss_pred             eeEEEEccc
Q 021391          109 LNILINNAG  117 (313)
Q Consensus       109 id~lv~~ag  117 (313)
                      .|++|.+.+
T Consensus        69 ad~~ia~t~   77 (461)
T 4g65_A           69 ADMLVAVTN   77 (461)
T ss_dssp             CSEEEECCS
T ss_pred             CCEEEEEcC
Confidence            788887654

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=96.27  E-value=0.075  Score=47.41  Aligned_cols=120  Identities=15%  Similarity=0.148  Sum_probs=71.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHh----CCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           30 LTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKE----IPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~----~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      +++.|.|| |.+|..++..|+..|. +|++.++++++++.....+...    ....++.. ..|.   +           
T Consensus         5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~-t~d~---~-----------   68 (322)
T 1t2d_A            5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSG-SNTY---D-----------   68 (322)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEE-ECCG---G-----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEE-CCCH---H-----------
Confidence            57899998 9999999999999998 9999999988877655555432    11122222 1222   1           


Q ss_pred             cCCCeeEEEEcccCCCCCCccCcc-chhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          105 QGRPLNILINNAGIMASPFMLSKD-NIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~~~~~~-~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                      .+...|++|.++|....+.....| .-...+..|.-    +.+.+.+.+.+.    .+++.+|++|-...
T Consensus        69 al~~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~----i~~~i~~~i~~~----~p~a~iiv~tNP~~  130 (322)
T 1t2d_A           69 DLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNK----IMIEIGGHIKKN----CPNAFIIVVTNPVD  130 (322)
T ss_dssp             GGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHH----HHHHHHHHHHHH----CTTSEEEECSSSHH
T ss_pred             HhCCCCEEEEeCCCCCCCCCCcccccHHHHHHHHHH----HHHHHHHHHHHH----CCCeEEEEecCChH
Confidence            123689999999975432211000 01122333333    445555555553    23567777766544

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=96.23  E-value=0.0066  Score=54.92  Aligned_cols=80  Identities=19%  Similarity=0.218  Sum_probs=59.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecC-------------------chhHHHHHHHHHHhCCCCceEEEE
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRN-------------------MAAGKDVREAIVKEIPSAKVDAME   86 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~   86 (313)
                      +.+.+|+|.|+ ||+|..+++.|+..|. ++.++|.+                   ..+++.+.+.+.+.+|..++..+.
T Consensus        34 L~~~~VlivG~-GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~~  112 (346)
T 1y8q_A           34 LRASRVLLVGL-KGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVDT  112 (346)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEEC
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEEe
Confidence            56789999996 6999999999999998 79998643                   246777777788777777777777


Q ss_pred             ccCCCHHHHHHHHHHHhhcCCCeeEEEEcc
Q 021391           87 LDVSSLASVRKFASEYNSQGRPLNILINNA  116 (313)
Q Consensus        87 ~D~s~~~~v~~~~~~~~~~~g~id~lv~~a  116 (313)
                      .++++.  ...++       ...|+||.+.
T Consensus       113 ~~~~~~--~~~~~-------~~~dvVv~~~  133 (346)
T 1y8q_A          113 EDIEKK--PESFF-------TQFDAVCLTC  133 (346)
T ss_dssp             SCGGGC--CHHHH-------TTCSEEEEES
T ss_pred             cccCcc--hHHHh-------cCCCEEEEcC
Confidence            666541  12222       2578888765

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=96.16  E-value=0.058  Score=48.04  Aligned_cols=117  Identities=13%  Similarity=0.208  Sum_probs=68.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHhCC-CCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           30 LTAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKEIP-SAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      +++.|.|+ |.+|.+++..|+..|.  .|++.+++.+.++.....+....+ ........   ++.+.           .
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~d~~~-----------~   65 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA---GDYAD-----------L   65 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE---CCGGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe---CCHHH-----------h
Confidence            36889998 9999999999999998  999999998877765554433211 00111111   23221           1


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                      ...|++|.+++....+..   .. ...+..|.--    .+.+.+.+.+.    .+++.||++|...+
T Consensus        66 ~~aDvViiav~~~~~~g~---~r-~dl~~~n~~i----~~~i~~~i~~~----~~~~~ii~~tNp~~  120 (319)
T 1a5z_A           66 KGSDVVIVAAGVPQKPGE---TR-LQLLGRNARV----MKEIARNVSKY----APDSIVIVVTNPVD  120 (319)
T ss_dssp             TTCSEEEECCCCCCCSSC---CH-HHHHHHHHHH----HHHHHHHHHHH----CTTCEEEECSSSHH
T ss_pred             CCCCEEEEccCCCCCCCC---CH-HHHHHHHHHH----HHHHHHHHHhh----CCCeEEEEeCCcHH
Confidence            368999999986433211   11 1223333333    34444444442    22567777765544

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=96.16  E-value=0.063  Score=47.61  Aligned_cols=115  Identities=20%  Similarity=0.132  Sum_probs=69.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc--CCEEEEEecCchhHHHHHHHHHHh----CCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           31 TAIVTGASSGIGTETARVLALR--GVHVIMAVRNMAAGKDVREAIVKE----IPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~--G~~V~l~~r~~~~~~~~~~~l~~~----~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      ++.|.|+ |.+|..++..|++.  |.+|++.++++++++....++...    ....++.. ..   |.+.          
T Consensus         2 kI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t~---d~~~----------   66 (310)
T 1guz_A            2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG-SN---DYAD----------   66 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEE-ES---CGGG----------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEE-CC---CHHH----------
Confidence            6889998 99999999999985  789999999988777554333321    01111111 12   2211          


Q ss_pred             cCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          105 QGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                       ....|++|.+++....+.    ......+..|..-...+.+.+.++        .+++.||++|-..+
T Consensus        67 -l~~aDvViiav~~p~~~g----~~r~dl~~~n~~i~~~i~~~i~~~--------~~~~~viv~tNP~~  122 (310)
T 1guz_A           67 -TANSDIVIITAGLPRKPG----MTREDLLMKNAGIVKEVTDNIMKH--------SKNPIIIVVSNPLD  122 (310)
T ss_dssp             -GTTCSEEEECCSCCCCTT----CCHHHHHHHHHHHHHHHHHHHHHH--------CSSCEEEECCSSHH
T ss_pred             -HCCCCEEEEeCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHh--------CCCcEEEEEcCchH
Confidence             236899999998532211    112234445555444455554444        23678888766544

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.11  E-value=0.0094  Score=52.07  Aligned_cols=40  Identities=38%  Similarity=0.447  Sum_probs=36.5

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecC
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRN   62 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~   62 (313)
                      ...+++||+++|.|+++-+|+.++..|+..|++|.++.+.
T Consensus       155 ~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~  194 (286)
T 4a5o_A          155 TGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRF  194 (286)
T ss_dssp             TTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             hCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            4567999999999999999999999999999999998764

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.09  E-value=0.019  Score=52.81  Aligned_cols=43  Identities=21%  Similarity=0.098  Sum_probs=38.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHH
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVR   70 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~   70 (313)
                      +.+.+|+|.|+ |.+|..+++.+...|++|++++++....+.+.
T Consensus       188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~  230 (405)
T 4dio_A          188 VPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVA  230 (405)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            57899999999 79999999999999999999999988766543

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.08  E-value=0.0062  Score=53.19  Aligned_cols=46  Identities=17%  Similarity=0.166  Sum_probs=39.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHH
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVR   70 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~   70 (313)
                      .++++|++++|.|+ |++|+++++.|++.|++|++++|+.++.++..
T Consensus       124 ~~~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~  169 (275)
T 2hk9_A          124 IPEVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLA  169 (275)
T ss_dssp             CTTGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHT
T ss_pred             CCCcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH
Confidence            35678999999996 69999999999999999999999987665543

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=96.06  E-value=0.0042  Score=54.27  Aligned_cols=87  Identities=13%  Similarity=0.209  Sum_probs=56.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHH-cCCEEE-EEecCchh--HHHHH-------------HHHHHhCCCCceEEEEccC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLAL-RGVHVI-MAVRNMAA--GKDVR-------------EAIVKEIPSAKVDAMELDV   89 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~-~G~~V~-l~~r~~~~--~~~~~-------------~~l~~~~~~~~~~~~~~D~   89 (313)
                      ++..++.|+|++|.+|+.+++.+++ .|+.|+ +++++.+.  ..+..             ..+.... . .+ -+.+|+
T Consensus         3 ~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l-~-~~-DvVIDf   79 (273)
T 1dih_A            3 DANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVK-D-DF-DVFIDF   79 (273)
T ss_dssp             CCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTT-T-SC-SEEEEC
T ss_pred             CCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHh-c-CC-CEEEEc
Confidence            4456899999999999999999885 577766 55555422  00000             0000000 0 12 356689


Q ss_pred             CCHHHHHHHHHHHhhcCCCeeEEEEcccC
Q 021391           90 SSLASVRKFASEYNSQGRPLNILINNAGI  118 (313)
Q Consensus        90 s~~~~v~~~~~~~~~~~g~id~lv~~ag~  118 (313)
                      +.++.....+..+.+.  ++++++-+.|.
T Consensus        80 t~p~~~~~~~~~a~~~--G~~vVigTtG~  106 (273)
T 1dih_A           80 TRPEGTLNHLAFCRQH--GKGMVIGTTGF  106 (273)
T ss_dssp             SCHHHHHHHHHHHHHT--TCEEEECCCCC
T ss_pred             CChHHHHHHHHHHHhC--CCCEEEECCCC
Confidence            9999888888877665  57788877764

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.06  E-value=0.011  Score=51.28  Aligned_cols=36  Identities=17%  Similarity=0.100  Sum_probs=34.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRN   62 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~   62 (313)
                      ++||+++|.|+++-+|+.+|+.|+++|++|.++.++
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~  183 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK  183 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence            999999999999999999999999999999998764

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.05  E-value=0.012  Score=51.88  Aligned_cols=40  Identities=28%  Similarity=0.362  Sum_probs=36.8

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecC
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRN   62 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~   62 (313)
                      ...+++||+++|.|+++-+|+.++..|++.|++|.++.|.
T Consensus       159 ~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~  198 (300)
T 4a26_A          159 CGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSG  198 (300)
T ss_dssp             HTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             cCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            4578999999999999999999999999999999999874

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=96.05  E-value=0.13  Score=45.73  Aligned_cols=117  Identities=15%  Similarity=0.152  Sum_probs=68.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhC----CCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEI----PSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~----~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .+++.|.|+ |.+|.+++..|+..|. +|++.+++.+.++.....+....    ...++.. ..|.   +.         
T Consensus         4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t~d~---~a---------   69 (317)
T 2ewd_A            4 RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIG-TDDY---AD---------   69 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESCG---GG---------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEE-CCCH---HH---------
Confidence            367899998 8999999999999998 99999999877775433332210    0112221 1221   11         


Q ss_pred             hcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          104 SQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                        ....|++|.++|....+. .+.++   .+.-|.    .+.+.+.+.+.+.    .+++.++++|....
T Consensus        70 --~~~aDiVi~avg~p~~~g-~~r~d---~~~~~~----~i~~~i~~~i~~~----~~~~iii~~sNp~~  125 (317)
T 2ewd_A           70 --ISGSDVVIITASIPGRPK-DDRSE---LLFGNA----RILDSVAEGVKKY----CPNAFVICITNPLD  125 (317)
T ss_dssp             --GTTCSEEEECCCCSSCCS-SCGGG---GHHHHH----HHHHHHHHHHHHH----CTTSEEEECCSSHH
T ss_pred             --hCCCCEEEEeCCCCCCCC-CcHHH---HHHhhH----HHHHHHHHHHHHH----CCCcEEEEeCChHH
Confidence              136899999999754432 22222   222222    2344445554443    22556666665544

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=96.04  E-value=0.084  Score=47.22  Aligned_cols=116  Identities=16%  Similarity=0.168  Sum_probs=69.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhC----CCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           30 LTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEI----PSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~----~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      +++.|.|| |.+|.++|..|+..|. +|++.+++++.++.....+....    ...++.. ..|.   +.          
T Consensus        15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~-t~d~---~a----------   79 (328)
T 2hjr_A           15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFG-ENNY---EY----------   79 (328)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEE-ESCG---GG----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEE-CCCH---HH----------
Confidence            57999998 9999999999999998 99999999887775444443221    1122222 1232   11          


Q ss_pred             cCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          105 QGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                       ....|++|.++|....+.. +..   ..+..|.    .+.+.+.+.+.+.    .+++.++++|-...
T Consensus        80 -l~~aD~VI~avg~p~k~g~-tr~---dl~~~n~----~i~~~i~~~i~~~----~p~a~viv~tNP~~  135 (328)
T 2hjr_A           80 -LQNSDVVIITAGVPRKPNM-TRS---DLLTVNA----KIVGSVAENVGKY----CPNAFVICITNPLD  135 (328)
T ss_dssp             -GTTCSEEEECCSCCCCTTC-CSG---GGHHHHH----HHHHHHHHHHHHH----CTTCEEEECCSSHH
T ss_pred             -HCCCCEEEEcCCCCCCCCC-chh---hHHhhhH----HHHHHHHHHHHHH----CCCeEEEEecCchH
Confidence             2368999999997543322 222   1222333    3444555555543    23566666665443

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=96.03  E-value=0.018  Score=52.53  Aligned_cols=70  Identities=10%  Similarity=0.071  Sum_probs=52.2

Q ss_pred             hccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHH
Q 021391           21 VTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFAS  100 (313)
Q Consensus        21 ~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~  100 (313)
                      ++.++.+.+|+++|.|+ |.+|+.+++.+.+.|++|++++.+......       .   ..-.++..|..|.+.+.++++
T Consensus         4 ~~~~~~~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~-------~---~ad~~~~~~~~d~~~l~~~~~   72 (377)
T 3orq_A            4 MNFNKLKFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCR-------Y---VAHEFIQAKYDDEKALNQLGQ   72 (377)
T ss_dssp             SSCCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTG-------G---GSSEEEECCTTCHHHHHHHHH
T ss_pred             cccccCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhh-------h---hCCEEEECCCCCHHHHHHHHH
Confidence            34556678999999986 568999999999999999999876542110       0   012366789999988888876


Q ss_pred             H
Q 021391          101 E  101 (313)
Q Consensus       101 ~  101 (313)
                      +
T Consensus        73 ~   73 (377)
T 3orq_A           73 K   73 (377)
T ss_dssp             H
T ss_pred             h
Confidence            3

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=96.03  E-value=0.097  Score=46.01  Aligned_cols=40  Identities=20%  Similarity=0.214  Sum_probs=35.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHH
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVR   70 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~   70 (313)
                      ++|.|.|+ |.+|.++|..|++.|++|++++|+.+.++...
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~   55 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSK   55 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHH
Confidence            67889988 89999999999999999999999988776643

>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}

Probab=96.01  E-value=0.0023  Score=59.12  Aligned_cols=38  Identities=26%  Similarity=0.428  Sum_probs=34.0

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEE-EEec
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVI-MAVR   61 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~-l~~r   61 (313)
                      ...+++||+++|+| .|.+|..+++.|.+.|++|+ +.++
T Consensus       212 ~g~~l~gk~vaVqG-~GnVG~~~a~~L~~~GakVVavsD~  250 (419)
T 3aoe_E          212 RGLDLRGARVVVQG-LGQVGAAVALHAERLGMRVVAVATS  250 (419)
T ss_dssp             HTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             cCCCccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEEcC
Confidence            34589999999999 78999999999999999988 7777

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=96.01  E-value=0.099  Score=47.57  Aligned_cols=123  Identities=11%  Similarity=0.036  Sum_probs=71.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC--E---EEEEecCch----hHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHH
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGV--H---VIMAVRNMA----AGKDVREAIVKEIPSAKVDAMELDVSSLASVRKF   98 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~--~---V~l~~r~~~----~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~   98 (313)
                      +..+|.|+||+|.||.+++..|+..+.  .   |++.+.+.+    +++...-++....... ..-+  .+.+. .    
T Consensus        31 ~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~-~~~v--~i~~~-~----  102 (375)
T 7mdh_A           31 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPL-LREV--SIGID-P----  102 (375)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTT-EEEE--EEESC-H----
T ss_pred             CCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhh-cCCc--EEecC-C----
Confidence            346799999999999999999999865  2   777655433    3555555555432111 1111  11211 1    


Q ss_pred             HHHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391           99 ASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus        99 ~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                          .+.+...|++|.++|....+.    +.-...++.|..    +.+.+.+.+.+..   ..++.|+++|...-
T Consensus       103 ----y~~~~daDvVVitag~prkpG----~tR~DLl~~N~~----I~k~i~~~i~~~a---~p~~ivlVvsNPvD  162 (375)
T 7mdh_A          103 ----YEVFEDVDWALLIGAKPRGPG----MERAALLDINGQ----IFADQGKALNAVA---SKNVKVLVVGNPCN  162 (375)
T ss_dssp             ----HHHTTTCSEEEECCCCCCCTT----CCHHHHHHHHHH----HHHHHHHHHHHHS---CTTCEEEECSSSHH
T ss_pred             ----HHHhCCCCEEEEcCCCCCCCC----CCHHHHHHHHHH----HHHHHHHHHHHhc---CCCeEEEEecCchh
Confidence                112347899999999754332    223344556654    4455555555531   23678888887643

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.01  E-value=0.0026  Score=56.72  Aligned_cols=85  Identities=21%  Similarity=0.121  Sum_probs=56.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      ..++.|++++|.|++.=+|+.+|+.|+..|++|.+++|+.....+..+++.    ........+..++++++.+.+.   
T Consensus       172 g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la----~~~~~~t~~~~t~~~~L~e~l~---  244 (320)
T 1edz_A          172 GNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLK----LNKHHVEDLGEYSEDLLKKCSL---  244 (320)
T ss_dssp             TCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSS----CCCCEEEEEEECCHHHHHHHHH---
T ss_pred             CCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHh----hhcccccccccccHhHHHHHhc---
Confidence            447999999999999989999999999999999999887433221111110    0001111111134466666666   


Q ss_pred             hcCCCeeEEEEcccCC
Q 021391          104 SQGRPLNILINNAGIM  119 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~  119 (313)
                          .-|+||.+.|..
T Consensus       245 ----~ADIVIsAtg~p  256 (320)
T 1edz_A          245 ----DSDVVITGVPSE  256 (320)
T ss_dssp             ----HCSEEEECCCCT
T ss_pred             ----cCCEEEECCCCC
Confidence                469999999853

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=96.00  E-value=0.07  Score=47.27  Aligned_cols=116  Identities=16%  Similarity=0.151  Sum_probs=66.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHh----CCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           30 LTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKE----IPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~----~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      +++.|+|| |.+|..++..|+..|. +|++.++++++++....++...    ....++.+ ..|.   +.          
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~-t~d~---~a----------   67 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTG-TNNY---AD----------   67 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE-ESCG---GG----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEE-CCCH---HH----------
Confidence            57999999 9999999999999996 9999999988777655555431    11122222 1222   11          


Q ss_pred             cCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          105 QGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                       +...|++|.++|....+.. +.+   ..+..|.    .+.+.+.+.+.+.    ..++.|+++|-...
T Consensus        68 -~~~aD~Vi~a~g~p~~~g~-~r~---dl~~~n~----~i~~~i~~~i~~~----~p~a~vi~~tNPv~  123 (309)
T 1ur5_A           68 -TANSDVIVVTSGAPRKPGM-SRE---DLIKVNA----DITRACISQAAPL----SPNAVIIMVNNPLD  123 (309)
T ss_dssp             -GTTCSEEEECCCC---------C---HHHHHHH----HHHHHHHHHHGGG----CTTCEEEECCSSHH
T ss_pred             -HCCCCEEEEcCCCCCCCCC-CHH---HHHHHHH----HHHHHHHHHHHhh----CCCeEEEEcCCchH
Confidence             2368999999997543321 111   1222332    3445555555543    23556666655443

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=95.98  E-value=0.026  Score=50.23  Aligned_cols=88  Identities=15%  Similarity=0.105  Sum_probs=55.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHH-------HHHhCCCCceEEEEccCCCHHHHHHHH
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREA-------IVKEIPSAKVDAMELDVSSLASVRKFA   99 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~-------l~~~~~~~~~~~~~~D~s~~~~v~~~~   99 (313)
                      ...+++.|.|+ |.+|..+++.|++.|++|++.+|+.++.+...+.       +.+..  ....++..-+.+...++.++
T Consensus        29 ~~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~--~~aDvVi~~vp~~~~~~~v~  105 (320)
T 4dll_A           29 PYARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAA--RDADIVVSMLENGAVVQDVL  105 (320)
T ss_dssp             CCCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHH--TTCSEEEECCSSHHHHHHHH
T ss_pred             cCCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHH--hcCCEEEEECCCHHHHHHHH
Confidence            45578888865 8999999999999999999999998877665431       01100  01234444455555666655


Q ss_pred             H--HHhhcCCCeeEEEEccc
Q 021391          100 S--EYNSQGRPLNILINNAG  117 (313)
Q Consensus       100 ~--~~~~~~g~id~lv~~ag  117 (313)
                      .  .+.....+-.++|++..
T Consensus       106 ~~~~~~~~l~~~~~vi~~st  125 (320)
T 4dll_A          106 FAQGVAAAMKPGSLFLDMAS  125 (320)
T ss_dssp             TTTCHHHHCCTTCEEEECSC
T ss_pred             cchhHHhhCCCCCEEEecCC
Confidence            4  34333333345555543

>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2

Probab=95.98  E-value=0.023  Score=53.57  Aligned_cols=133  Identities=12%  Similarity=0.122  Sum_probs=73.9

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHc-----CCEEEEEecCchhHHHHHHHHHHhC-----CCCceEEEEccCCCH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALR-----GVHVIMAVRNMAAGKDVREAIVKEI-----PSAKVDAMELDVSSL   92 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~-----G~~V~l~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~~D~s~~   92 (313)
                      .+|.|+.++|.|.||++..|.+++..|+.+     +..|++.+++.++++... .+....     ...++..  .  +|.
T Consensus        22 ~~m~m~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~-~~~~~~l~~~~~~~~I~~--t--~D~   96 (472)
T 1u8x_X           22 SNMKKKSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIA-GACDVFIREKAPDIEFAA--T--TDP   96 (472)
T ss_dssp             ----CCCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHH-HHHHHHHHHHCTTSEEEE--E--SCH
T ss_pred             cccccCCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHH-HHHHHHhccCCCCCEEEE--E--CCH
Confidence            334345678999999998888899999988     567999999998776643 222211     1222222  1  232


Q ss_pred             HHHHHHHHHHhhcCCCeeEEEEcccCCCCCCccCccchhhh-----hhhh-------hhHHHHHHHHHHHHHHHhhccCC
Q 021391           93 ASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQ-----FATN-------HLGHFLLTHLLLDTMKKTAQKSS  160 (313)
Q Consensus        93 ~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~-----~~~n-------~~~~~~l~~~~~~~l~~~~~~~~  160 (313)
                         .+.++       .-|+||..+|....+...-.+.+..-     .+++       ..-.+-+++.+.+.+.+.    .
T Consensus        97 ---~eal~-------~AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~----~  162 (472)
T 1u8x_X           97 ---EEAFT-------DVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKY----S  162 (472)
T ss_dssp             ---HHHHS-------SCSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHH----C
T ss_pred             ---HHHHc-------CCCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHH----C
Confidence               12222       68999999987432110000000000     1111       122233556666666665    4


Q ss_pred             CCCeEEEECCcccc
Q 021391          161 REGRIVNVSSEAHR  174 (313)
Q Consensus       161 ~~g~iv~isS~~~~  174 (313)
                      +++-+|++|-....
T Consensus       163 P~A~ii~~TNPvdi  176 (472)
T 1u8x_X          163 PDAWMLNYSNPAAI  176 (472)
T ss_dssp             TTCEEEECCSCHHH
T ss_pred             CCeEEEEeCCcHHH
Confidence            57888888876654

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=95.98  E-value=0.01  Score=51.84  Aligned_cols=40  Identities=30%  Similarity=0.362  Sum_probs=36.3

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecC
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRN   62 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~   62 (313)
                      ...+++||+++|.|+++-+|+.++..|+.+|++|.++.++
T Consensus       155 ~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~  194 (285)
T 3l07_A          155 YGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF  194 (285)
T ss_dssp             TTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             hCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            4567999999999999999999999999999999988654

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=95.96  E-value=0.092  Score=46.50  Aligned_cols=115  Identities=17%  Similarity=0.247  Sum_probs=72.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHh----CCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           31 TAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKE----IPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~----~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      ++.|+|| |.+|..++..|+..|. .|++.+++.++++....++...    ....++.. ..|   .+           .
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~-t~d---~~-----------a   64 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISG-SNS---YE-----------D   64 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEE-ESC---GG-----------G
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEE-CCC---HH-----------H
Confidence            3778998 9999999999999888 6999999988877666666542    11222222 122   11           1


Q ss_pred             CCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          106 GRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                      +...|++|..+|....+. .+.+   ..+..|.-    +.+.+.+.+.+.    .+++.+|++|-...
T Consensus        65 ~~~aD~Vi~~ag~~~k~G-~~r~---dl~~~n~~----i~~~i~~~i~~~----~p~a~iiv~tNPv~  120 (308)
T 2d4a_B           65 MRGSDIVLVTAGIGRKPG-MTRE---QLLEANAN----TMADLAEKIKAY----AKDAIVVITTNPVD  120 (308)
T ss_dssp             GTTCSEEEECCSCCCCSS-CCTH---HHHHHHHH----HHHHHHHHHHHH----CTTCEEEECCSSHH
T ss_pred             hCCCCEEEEeCCCCCCCC-CcHH---HHHHHHHH----HHHHHHHHHHHH----CCCeEEEEeCCchH
Confidence            237899999999754432 2222   22333333    455555555553    34678888876544

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=95.95  E-value=0.011  Score=51.15  Aligned_cols=48  Identities=31%  Similarity=0.367  Sum_probs=40.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHH
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAI   73 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l   73 (313)
                      .++++| +++|.|+ |++|+++++.|.+.|++|.+++|+.++.++..+++
T Consensus       112 ~~~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~  159 (263)
T 2d5c_A          112 GIPLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEF  159 (263)
T ss_dssp             TCCCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred             CCCCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh
Confidence            457889 9999997 77999999999999999999999987776655443

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=95.95  E-value=0.025  Score=49.44  Aligned_cols=85  Identities=12%  Similarity=0.110  Sum_probs=55.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC---EEEEEecCchhHHHHHHHH--------HHhCCCCceEEEEccCCCHHHHHH
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGV---HVIMAVRNMAAGKDVREAI--------VKEIPSAKVDAMELDVSSLASVRK   97 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~---~V~l~~r~~~~~~~~~~~l--------~~~~~~~~~~~~~~D~s~~~~v~~   97 (313)
                      .+++.|.|+ |.+|.++++.|++.|+   +|++++|+.++.+...+..        .+......+.++.+   .+..+..
T Consensus         3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~~   78 (280)
T 3tri_A            3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIKM   78 (280)
T ss_dssp             CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHHH
T ss_pred             CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHHH
Confidence            467888887 8999999999999998   8999999998877665431        11111223333333   3456667


Q ss_pred             HHHHHhhc-CCCeeEEEEccc
Q 021391           98 FASEYNSQ-GRPLNILINNAG  117 (313)
Q Consensus        98 ~~~~~~~~-~g~id~lv~~ag  117 (313)
                      +++++... ..+=.++|++++
T Consensus        79 vl~~l~~~~l~~~~iiiS~~a   99 (280)
T 3tri_A           79 VCEELKDILSETKILVISLAV   99 (280)
T ss_dssp             HHHHHHHHHHTTTCEEEECCT
T ss_pred             HHHHHHhhccCCCeEEEEecC
Confidence            77776543 322226776654

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=95.92  E-value=0.033  Score=48.64  Aligned_cols=41  Identities=15%  Similarity=0.174  Sum_probs=36.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHH
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVR   70 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~   70 (313)
                      +++.|.|++|.+|.++++.|++.|++|++++|+.+..+...
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~   52 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQ   52 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence            58999999999999999999999999999999987766543

>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2

Probab=95.90  E-value=0.008  Score=56.69  Aligned_cols=127  Identities=13%  Similarity=0.101  Sum_probs=74.0

Q ss_pred             CCEEEEeCCCC-chHHHHHHHHHHc----CCEEEEEecCchhHHHHHHHHHH---hCC-CCceEEEEccCCCHHHHHHHH
Q 021391           29 GLTAIVTGASS-GIGTETARVLALR----GVHVIMAVRNMAAGKDVREAIVK---EIP-SAKVDAMELDVSSLASVRKFA   99 (313)
Q Consensus        29 gk~~lItGas~-giG~aia~~La~~----G~~V~l~~r~~~~~~~~~~~l~~---~~~-~~~~~~~~~D~s~~~~v~~~~   99 (313)
                      .++|.|.||++ |.|.+++..|++.    |..|++.+++.+.++........   ... ..++.. .   +|.   .+.+
T Consensus         3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~-t---tD~---~eal   75 (480)
T 1obb_A            3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEK-T---MNL---DDVI   75 (480)
T ss_dssp             CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEE-E---SCH---HHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEE-E---CCH---HHHh
Confidence            46899999999 8999999999864    78999999999887764443322   111 112222 1   232   1222


Q ss_pred             HHHhhcCCCeeEEEEcccCCCCCC-----------ccCccchhhhhhh--------hhhHHHHHHHHHHHHHHHhhccCC
Q 021391          100 SEYNSQGRPLNILINNAGIMASPF-----------MLSKDNIELQFAT--------NHLGHFLLTHLLLDTMKKTAQKSS  160 (313)
Q Consensus       100 ~~~~~~~g~id~lv~~ag~~~~~~-----------~~~~~~~~~~~~~--------n~~~~~~l~~~~~~~l~~~~~~~~  160 (313)
                      +       .-|+||.++|....+.           +.. ..++++...        ...-.+-+++.+.+.+.+.    .
T Consensus        76 ~-------dAD~VIiaagv~~~~~~~~dE~ip~K~g~~-~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~----~  143 (480)
T 1obb_A           76 I-------DADFVINTAMVGGHTYLEKVRQIGEKYGYY-RGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKL----S  143 (480)
T ss_dssp             T-------TCSEEEECCCTTHHHHHHHHHHHHHHTTCT-TCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHH----C
T ss_pred             C-------CCCEEEECCCcccccccccccccccccccc-cchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHH----C
Confidence            2       6899999998632110           000 000111111        1223445666777777775    4


Q ss_pred             CCCeEEEECCcccc
Q 021391          161 REGRIVNVSSEAHR  174 (313)
Q Consensus       161 ~~g~iv~isS~~~~  174 (313)
                      +++-+|++|-....
T Consensus       144 P~A~ii~~TNPvdi  157 (480)
T 1obb_A          144 PKAWYLQAANPIFE  157 (480)
T ss_dssp             TTCEEEECSSCHHH
T ss_pred             CCeEEEEeCCcHHH
Confidence            57788888876653

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=95.88  E-value=0.00074  Score=61.23  Aligned_cols=39  Identities=26%  Similarity=0.382  Sum_probs=35.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchh
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAA   65 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~   65 (313)
                      +++||++.|.| .|.||+.+++.|.+.|++|++.+++...
T Consensus       172 ~L~GktV~I~G-~GnVG~~~A~~l~~~GakVvvsD~~~~~  210 (355)
T 1c1d_A          172 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTER  210 (355)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CCCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEeCCccH
Confidence            68999999997 5899999999999999999988887543

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=95.87  E-value=0.038  Score=48.65  Aligned_cols=80  Identities=16%  Similarity=0.115  Sum_probs=52.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      .+++.|.||.|.+|.++++.|++.|++|++++|+.+...   .+...   ...+.++.+-..   .+..+++++.....+
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~~~---~~~~~---~aDvVilavp~~---~~~~vl~~l~~~l~~   91 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVA---ESILA---NADVVIVSVPIN---LTLETIERLKPYLTE   91 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGH---HHHHT---TCSEEEECSCGG---GHHHHHHHHGGGCCT
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcccCH---HHHhc---CCCEEEEeCCHH---HHHHHHHHHHhhcCC
Confidence            367999999999999999999999999999999865311   11111   344555544332   366677777554432


Q ss_pred             eeEEEEccc
Q 021391          109 LNILINNAG  117 (313)
Q Consensus       109 id~lv~~ag  117 (313)
                      =.+|+++++
T Consensus        92 ~~iv~~~~s  100 (298)
T 2pv7_A           92 NMLLADLTS  100 (298)
T ss_dssp             TSEEEECCS
T ss_pred             CcEEEECCC
Confidence            235555554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	313
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	5e-40
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	5e-39
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	1e-37
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	9e-35
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	4e-34
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	2e-32
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	1e-31
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	2e-31
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	2e-31
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	2e-29
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	2e-28
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	3e-28
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	1e-27
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	1e-27
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	2e-27
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	6e-27
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	1e-26
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-26
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	4e-26
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	5e-26
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	9e-25
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	2e-24
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	5e-24
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	2e-23
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	3e-23
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	6e-23
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	7e-23
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	7e-23
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	8e-23
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	2e-22
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	2e-22
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	3e-22
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	3e-22
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-21
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	2e-21
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	2e-21
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	2e-21
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	3e-21
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	3e-21
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	1e-20
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	5e-20
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	7e-20
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	1e-19
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	2e-19
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-19
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	9e-19
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	1e-18
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	2e-18
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	2e-18
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	4e-18
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	6e-18
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	9e-18
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	3e-16
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	8e-16
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-15
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-15
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	3e-14
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	5e-14
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-13
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	2e-10
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-09
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	7e-09
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	2e-07
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	5e-07
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	1e-06
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	1e-06
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	1e-06
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	3e-06
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	4e-06
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	7e-06
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	8e-05
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	1e-04
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-04
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	3e-04
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	3e-04
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	4e-04
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	4e-04
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	4e-04
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	0.002
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	0.003

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  139 bits (350), Expect = 5e-40
 Identities = 65/289 (22%), Positives = 106/289 (36%), Gaps = 54/289 (18%)

Query: 32  AIVTGASSGIGTETARVLA-LRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
           A+VTG + GIG    R L  L    V++  R++  G+   + +  E         +LD+ 
Sbjct: 6   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQLDID 63

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGIM--ASPFMLSKDNIELQFATNHLGHFLLTHLL 148
            L S+R        +   L++L+NNAGI    +         E+   TN  G   +   L
Sbjct: 64  DLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTEL 123

Query: 149 LDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG--------------------------IR 182
           L  +K        +GR+VNVSS     A                                
Sbjct: 124 LPLIKP-------QGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVED 176

Query: 183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGV--NITANSLHPGSIVTNLFRY 240
             K   +       AYG +K+   + ++  A+ L E      I  N+  PG + T++   
Sbjct: 177 TKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP 236

Query: 241 NGILRGFCNTVGKLVLKNIPQGAATTCYVALHP-QVQGVSGEYFSDSNI 288
                           K+  +GA T  Y+AL P   +G  G++ S+  +
Sbjct: 237 KA-------------TKSPEEGAETPVYLALLPPDAEGPHGQFVSEKRV 272

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  136 bits (343), Expect = 5e-39
 Identities = 48/211 (22%), Positives = 83/211 (39%), Gaps = 18/211 (8%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
            A+VTGAS GIG   AR L  +G+ V+   R +   +++            +     D+S
Sbjct: 12  LALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLS 71

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGI--MASPFMLSKDNIELQFATNHLGHFLLTHLL 148
           +   +    S   SQ   ++I INNAG+    +    S    +  F  N L   + T   
Sbjct: 72  NEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREA 131

Query: 149 LDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILH 208
             +MK+   ++  +G I+N++S +                    +    Y  +K A    
Sbjct: 132 YQSMKE---RNVDDGHIININSMSGHRVL-------------PLSVTHFYSATKYAVTAL 175

Query: 209 AKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
            + L + L+E   +I A  + PG + T    
Sbjct: 176 TEGLRQELREAQTHIRATCISPGVVETQFAF 206

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  132 bits (333), Expect = 1e-37
 Identities = 64/261 (24%), Positives = 98/261 (37%), Gaps = 30/261 (11%)

Query: 31  TAIVTGASSGIGTETARVLALRG--VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           + +VTGA+ GIG    + L       H+I   R++    +     +K I  ++V  + L 
Sbjct: 5   SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE-----LKSIKDSRVHVLPLT 59

Query: 89  VSSLASVRKFASEYNSQ--GRPLNILINNAGIM---ASPFMLSKDNIELQFATNHLGHFL 143
           V+   S+  F S+         L++LINNAG++    +    ++  I  Q   N     L
Sbjct: 60  VTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVL 119

Query: 144 LTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKL 203
           LT  LL  +K     S   G  ++VS  A     S           SA     AY  SK 
Sbjct: 120 LTQKLLPLLKN--AASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKA 177

Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGA 263
           A  +  + LA  LK+D   +   +  PG + TNL   N  L              + Q  
Sbjct: 178 AINMFGRTLAVDLKDDN--VLVVNFCPGWVQTNLGGKNAAL-------------TVEQST 222

Query: 264 ATTCYVALHPQVQGVSGEYFS 284
           A              +G +F 
Sbjct: 223 AELISSFNKLD-NSHNGRFFM 242

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  124 bits (313), Expect = 9e-35
 Identities = 52/215 (24%), Positives = 86/215 (40%), Gaps = 25/215 (11%)

Query: 25  IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDA 84
           ++G    A+VTGA+ GIG   A  L L+G  V +   N+ AG   + A+ ++    K   
Sbjct: 1   VNGK--VALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLF 58

Query: 85  MELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLL 144
           ++ DV+    +R    +       L+IL+NNAG+       ++ N E     N +     
Sbjct: 59  IQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVN------NEKNWEKTLQINLVSVISG 112

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
           T+L LD M K  Q     G I+N+SS A     +          +  Y +          
Sbjct: 113 TYLGLDYMSK--QNGGEGGIIINMSSLAGLMPVA---------QQPVYCASKHGIVGFTR 161

Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
           +   A  L          +  N++ PG + T +  
Sbjct: 162 SAALAANLMNS------GVRLNAICPGFVNTAILE 190

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (308), Expect = 4e-34
 Identities = 52/215 (24%), Positives = 76/215 (35%), Gaps = 25/215 (11%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
           TG   ++TGA  GIG  TA   A     +++   N    ++           AKV    +
Sbjct: 6   TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVV 63

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNA--GIMASPFMLSKDNIELQFATNHLGHFLLT 145
           D S+   +   A +  ++   ++IL+NNA     +  F      IE  F  N L HF  T
Sbjct: 64  DCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTT 123

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
              L  M K     +  G IV V+S A   +                    AY  SK A 
Sbjct: 124 KAFLPAMTK-----NNHGHIVTVASAAGHVSVP---------------FLLAYCSSKFAA 163

Query: 206 ILHAKELAKHL-KEDGVNITANSLHPGSIVTNLFR 239
           +   K L   L       +    L P  + T   +
Sbjct: 164 VGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIK 198

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  118 bits (298), Expect = 2e-32
 Identities = 55/216 (25%), Positives = 79/216 (36%), Gaps = 27/216 (12%)

Query: 25  IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDA 84
           +D T    I   A  GIG +T+R L  R +   + +  +     + E      P   +  
Sbjct: 1   MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAIN-PKVNITF 59

Query: 85  MELDVS-SLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFL 143
              DV+  +A  +K   +   Q + ++ILIN AGI+          IE   A N  G   
Sbjct: 60  HTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGIL------DDHQIERTIAINFTGLVN 113

Query: 144 LTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKL 203
            T  +LD   K  +K    G I N+ S     A                     Y  SK 
Sbjct: 114 TTTAILDFWDK--RKGGPGGIIANICSVTGFNAIH---------------QVPVYSASKA 156

Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
           A +     LAK     G  +TA S++PG   T L  
Sbjct: 157 AVVSFTNSLAKLAPITG--VTAYSINPGITRTPLVH 190

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  116 bits (292), Expect = 1e-31
 Identities = 51/214 (23%), Positives = 83/214 (38%), Gaps = 28/214 (13%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G  A+VTG +SG+G E  ++L   G  V  +  N AAG+ +   +       +   +  
Sbjct: 5   QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRH 59

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIM--ASPFMLSKDNIELQFATNHLGHFLLT 145
           DVSS A      +    +   LN+L+NNAGI+          ++       N    F+  
Sbjct: 60  DVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGC 119

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
              +  MK+T       G I+N++S +                      +  Y  SK A 
Sbjct: 120 QQGIAAMKETG------GSIINMASVSSWL---------------PIEQYAGYSASKAAV 158

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
               +  A   ++ G  I  NS+HP  I T + +
Sbjct: 159 SALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQ 192

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (291), Expect = 2e-31
 Identities = 54/238 (22%), Positives = 84/238 (35%), Gaps = 32/238 (13%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G   +VTG   GIG    R     G  V++  ++ + G     A+ +E+P A    +  
Sbjct: 5   AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGG----RALEQELPGAV--FILC 58

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNA---GIMASPFMLSKDNIELQFATNHLGHFLL 144
           DV+    V+   SE   +   L+ ++NNA        P   S          N LG + L
Sbjct: 59  DVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTL 118

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
           T L L  ++K       +G ++N+SS                           Y  +K A
Sbjct: 119 TKLALPYLRK------SQGNVINISSLVGAI---------------GQAQAVPYVATKGA 157

Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQG 262
                K LA      G  +  N + PG+I T L+     L        +  +   P G
Sbjct: 158 VTAMTKALALDESPYG--VRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLG 213

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  116 bits (292), Expect = 2e-31
 Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 29/223 (13%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKE-IPSAKVDAME 86
               AI+TG+S+GIG  TA + A  G  V +  R+    ++ R+ I+   +    V+++ 
Sbjct: 4   AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVV 63

Query: 87  LDVSSLASVRKFASEYNSQGRPLNILINNAGIM------ASPFMLSKDNIELQFATNHLG 140
            DV++ A   +  S    +   L+IL+NNAG         +    S ++ +     N   
Sbjct: 64  ADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRS 123

Query: 141 HFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQ 200
              LT   +  +         +G IVN+SS A     +                F  Y  
Sbjct: 124 VIALTKKAVPHLSS------TKGEIVNISSIASGLHATPD--------------FPYYSI 163

Query: 201 SKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI 243
           +K A   + +  A  L + G  I  NS+ PG + T      G+
Sbjct: 164 AKAAIDQYTRNTAIDLIQHG--IRVNSISPGLVATGFGSAMGM 204

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  110 bits (277), Expect = 2e-29
 Identities = 54/237 (22%), Positives = 77/237 (32%), Gaps = 32/237 (13%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G   +VTG + GIG   A+  A  G  V +       GK+V EAI            ++
Sbjct: 4   AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLR-PEGKEVAEAI-------GGAFFQV 55

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIM--ASPFMLSKDNIELQFATNHLGHFLLT 145
           D+       +F  E       +++L+NNA I    S   +           N      L+
Sbjct: 56  DLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLS 115

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
            L    M+K        G IVNV+S    FA  E                 AY  SK   
Sbjct: 116 ALAAREMRK-----VGGGAIVNVASVQGLFAEQE---------------NAAYNASKGGL 155

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQG 262
           +   + LA  L      I  N++ PG+I T        L        +         
Sbjct: 156 VNLTRSLALDLAPLR--IRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALR 210

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  108 bits (270), Expect = 2e-28
 Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 28/214 (13%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
               A++TG ++GIG   A   A+ G  + +A    A      EA ++ +   +V  ++ 
Sbjct: 4   KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEA---EAAIRNLG-RRVLTVKC 59

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIM-ASPFM-LSKDNIELQFATNHLGHFLLT 145
           DVS    V  F  +  S     +IL+NNAGI    PF  L+ +  +  F  N    FL+ 
Sbjct: 60  DVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMA 119

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
              +  MK+     +  GRI+N++S  +                     +  Y  +K AN
Sbjct: 120 KAFVPGMKR-----NGWGRIINLTSTTYWLKIEA---------------YTHYISTKAAN 159

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
           I   + LA  L +DG  IT N++ P  + T    
Sbjct: 160 IGFTRALASDLGKDG--ITVNAIAPSLVRTATTE 191

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  107 bits (269), Expect = 3e-28
 Identities = 50/214 (23%), Positives = 78/214 (36%), Gaps = 24/214 (11%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G  AI+TG + GIG   A      G  V++  R+   G+   +++       ++   + 
Sbjct: 5   DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP---DQIQFFQH 61

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFM--LSKDNIELQFATNHLGHFLLT 145
           D S      K          P++ L+NNAGI  +  +   +        A N  G F  T
Sbjct: 62  DSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGT 121

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
            L +  M    +       I+N+SS                       S GAY  SK A 
Sbjct: 122 RLGIQRM----KNKGLGASIINMSSIEGFVGDP---------------SLGAYNASKGAV 162

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
            + +K  A        ++  N++HPG I T L  
Sbjct: 163 RIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVD 196

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  106 bits (265), Expect = 1e-27
 Identities = 58/244 (23%), Positives = 89/244 (36%), Gaps = 32/244 (13%)

Query: 22  TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAK 81
           +Q       T +VTG + GIG       A  G  +    RN     +      K+    +
Sbjct: 1   SQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQ 58

Query: 82  VDAMELDVSSLASVRKFASEYNSQ-GRPLNILINNAGIM-ASPFM-LSKDNIELQFATNH 138
           V     D S      K     +S  G  L+ILINN G + + P +  + ++     +TN 
Sbjct: 59  VTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNL 118

Query: 139 LGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAY 198
              + L+ L    +K +       G I+ +SS A   + S G                 Y
Sbjct: 119 ESAYHLSQLAHPLLKAS-----GCGNIIFMSSIAGVVSASVG---------------SIY 158

Query: 199 GQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKN 258
             +K A    A+ LA     DG  I AN++ P  I T L         + +   K+V+  
Sbjct: 159 SATKGALNQLARNLACEWASDG--IRANAVAPAVIATPLAE-----AVYDDEFKKVVISR 211

Query: 259 IPQG 262
            P G
Sbjct: 212 KPLG 215

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (265), Expect = 1e-27
 Identities = 54/214 (25%), Positives = 79/214 (36%), Gaps = 24/214 (11%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G   IVTGAS GIG E A  LA  G HV++  R+    + V    + E+ +A    +  
Sbjct: 13  QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCL-ELGAASAHYIAG 71

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGHFLLT 145
            +  +    +F ++       L++LI N     S   F     ++      N L + +LT
Sbjct: 72  TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLT 131

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
              L  +K+        G IV VSS A + AY                   AY  SK A 
Sbjct: 132 VAALPMLKQ------SNGSIVVVSSLAGKVAYP---------------MVAAYSASKFAL 170

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
                 + K      VN++      G I T    
Sbjct: 171 DGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAM 204

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  105 bits (263), Expect = 2e-27
 Identities = 57/238 (23%), Positives = 87/238 (36%), Gaps = 19/238 (7%)

Query: 25  IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDA 84
           I     T IVTG + GIG    R +A  G +V +  R+ A   +V E + KE    K  A
Sbjct: 5   ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFG-VKTKA 63

Query: 85  MELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLL 144
            + DVS+   V K   + ++   P++ LI NA    S    + +     FA  +  +   
Sbjct: 64  YQCDVSNTDIVTKTIQQIDADLGPISGLIANA--GVSVVKPATELTHEDFAFVYDVNVFG 121

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
                  + K   +  ++G IV  SS + +      +            +   Y  SK A
Sbjct: 122 VFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLN--------GSLTQVFYNSSKAA 173

Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQG 262
                K LA      G  I  N+L PG + T+              +      NIP  
Sbjct: 174 CSNLVKGLAAEWASAG--IRVNALSPGYVNTDQ------TAHMDKKIRDHQASNIPLN 223

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  103 bits (259), Expect = 6e-27
 Identities = 57/237 (24%), Positives = 83/237 (35%), Gaps = 35/237 (14%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
           +G T I+TG + G+G E AR     G  V++A      G      +             L
Sbjct: 4   SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHL 58

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIM--ASPFMLSKDNIELQFATNHLGHFLLT 145
           DV+     ++  +    +   ++ L+NNAGI         S +        N  G F+  
Sbjct: 59  DVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGM 118

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
             ++  MK      +  G IVN+SS A                        +YG SK   
Sbjct: 119 KTVIPAMKD-----AGGGSIVNISSAAGLM---------------GLALTSSYGASKWGV 158

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQG 262
              +K  A  L  D   I  NS+HPG   T +    GI        G+    N P G
Sbjct: 159 RGLSKLAAVELGTD--RIRVNSVHPGMTYTPMTAETGI------RQGEGNYPNTPMG 207

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  103 bits (257), Expect = 1e-26
 Identities = 48/217 (22%), Positives = 90/217 (41%), Gaps = 33/217 (15%)

Query: 25  IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDA 84
           ++ +GL A+VTGA  GIG +T + L   G  V+   R  +       ++ KE P  +   
Sbjct: 1   LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDL----VSLAKECPGIE--P 54

Query: 85  MELDVSSLASVRKFASEYNSQGRPLNILINNAGI--MASPFMLSKDNIELQFATNHLGHF 142
           + +D+    +  K          P+++L+NNA +  M     ++K+  +  F+ N    F
Sbjct: 55  VCVDLGDWDATEKALGGIG----PVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVF 110

Query: 143 LLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSK 202
            ++ ++     +        G IVNVSS      +                +   Y  +K
Sbjct: 111 QVSQMVA----RDMINRGVPGSIVNVSSMVAHVTFP---------------NLITYSSTK 151

Query: 203 LANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
            A  +  K +A  L      I  NS++P  ++T++ +
Sbjct: 152 GAMTMLTKAMAMELGPHK--IRVNSVNPTVVLTDMGK 186

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  102 bits (256), Expect = 2e-26
 Identities = 57/238 (23%), Positives = 83/238 (34%), Gaps = 28/238 (11%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G TA+VTG S GIG      LA  G  V    RN     D       +    KV+A   
Sbjct: 7   EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVC 64

Query: 88  DVSSLASVRKFASEYNSQ-GRPLNILINNAGIM--ASPFMLSKDNIELQFATNHLGHFLL 144
           D+SS +  ++  +   +     LNIL+NNAGI+        + ++  L  + N    + L
Sbjct: 65  DLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHL 124

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
           + L    +K     S R   +   S                     A      YG +K A
Sbjct: 125 SVLAHPFLK----ASERGNVVFISSVSGAL----------------AVPYEAVYGATKGA 164

Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQG 262
                + LA    +D   I  N + PG I T+L             + KL +      
Sbjct: 165 MDQLTRCLAFEWAKDN--IRVNGVGPGVIATSLVEMTIQDPEQKENLNKL-IDRCALR 219

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  103 bits (257), Expect = 4e-26
 Identities = 44/215 (20%), Positives = 81/215 (37%), Gaps = 30/215 (13%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRN-----MAAGKDVREAIVKEIPSAKV 82
            G   +VTGA  G+G   A   A RG  V++         +  G    + +V+EI   + 
Sbjct: 6   DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIR-RRG 64

Query: 83  DAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIM--ASPFMLSKDNIELQFATNHLG 140
                +  S+ +  K           +++++NNAGI+   S   +S ++ ++    +  G
Sbjct: 65  GKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRG 124

Query: 141 HFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQ 200
            F +T    D MKK        GRI+  +S +  +                      Y  
Sbjct: 125 SFQVTRAAWDHMKK-----QNYGRIIMTASASGIY---------------GNFGQANYSA 164

Query: 201 SKLANILHAKELAKHLKEDGVNITANSLHPGSIVT 235
           +KL  +  A  L    +++   I  N++ P +   
Sbjct: 165 AKLGLLGLANTLVIEGRKNN--IHCNTIAPNAGSR 197

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  102 bits (254), Expect = 5e-26
 Identities = 46/223 (20%), Positives = 85/223 (38%), Gaps = 29/223 (13%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKE-IPSAKVDAME 86
           +  T I+TG+S+GIG  TA + A  G +V +  R+    ++ R+ I+K  +   +V+++ 
Sbjct: 4   SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVV 63

Query: 87  LDVSSLASVRKFASEYNSQGRPLNILINNAG------IMASPFMLSKDNIELQFATNHLG 140
            DV++     +  +    Q   +++L+NNAG         +      D        N   
Sbjct: 64  ADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQA 123

Query: 141 HFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQ 200
              +T  +   +  +     +   +   S  A   A                  F  Y  
Sbjct: 124 VIEMTKKVKPHLVAS-----KGEIVNVSSIVAGPQAQP---------------DFLYYAI 163

Query: 201 SKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI 243
           +K A   + +  A  L + G  I  NS+ PG + T      G+
Sbjct: 164 AKAALDQYTRSTAIDLAKFG--IRVNSVSPGMVETGFTNAMGM 204

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 98.6 bits (245), Expect = 9e-25
 Identities = 45/217 (20%), Positives = 88/217 (40%), Gaps = 27/217 (12%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKE-IPSAKVDAME 86
           +G + I+TG+S+GIG   A + A  G  V +  RN    ++ ++ I+K  +P+ K++A+ 
Sbjct: 3   SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVV 62

Query: 87  LDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFML----SKDNIELQFATNHLGHF 142
            DV+  +      +   ++   ++IL+NNAG   +          +  +  F  N     
Sbjct: 63  ADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVI 122

Query: 143 LLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSK 202
            +T    + + KT  +      IV                         ++ +  Y  +K
Sbjct: 123 EMTQKTKEHLIKTKGEIVNVSSIVAGPQA--------------------HSGYPYYACAK 162

Query: 203 LANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
            A   + +  A  L + G  +  NS+ PG++ T    
Sbjct: 163 AALDQYTRCTAIDLIQHG--VRVNSVSPGAVATGFMG 197

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.8 bits (243), Expect = 2e-24
 Identities = 47/240 (19%), Positives = 81/240 (33%), Gaps = 30/240 (12%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPS---AKVDA 84
            G  AIVTG ++GIG    + L   G +V++A R +   K   + +   +P    A+V  
Sbjct: 11  QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIP 70

Query: 85  MELDVSSLASVRKFASEYNSQGRPLNILINNAGI--MASPFMLSKDNIELQFATNHLGHF 142
           ++ ++ +   V             +N L+NN G   ++    +S         TN  G F
Sbjct: 71  IQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTF 130

Query: 143 LLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSK 202
            +   +  +  K        G IVN+                       +      G ++
Sbjct: 131 YMCKAVYSSWMK-----EHGGSIVNIIVPTKA----------------GFPLAVHSGAAR 169

Query: 203 LANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQG 262
                  K LA      G  I  N + PG I +     N     +  +  +   + IP  
Sbjct: 170 AGVYNLTKSLALEWACSG--IRINCVAPGVIYSQTAVEN--YGSWGQSFFEGSFQKIPAK 225

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.8 bits (238), Expect = 5e-24
 Identities = 44/214 (20%), Positives = 87/214 (40%), Gaps = 33/214 (15%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G   +VTGA  GIG  T + L   G  V+   R  A      +++V+E P   ++ + +
Sbjct: 6   AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADL----DSLVRECP--GIEPVCV 59

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFM--LSKDNIELQFATNHLGHFLLT 145
           D+    +  +          P+++L+NNA +        ++K+  +  F  N      ++
Sbjct: 60  DLGDWEATERALGSVG----PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVS 115

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
            ++     +        G IVNVSS+  + A +               +   Y  +K A 
Sbjct: 116 QIVA----RGLIARGVPGAIVNVSSQCSQRAVT---------------NHSVYCSTKGAL 156

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
            +  K +A  L      I  N+++P  ++T++ +
Sbjct: 157 DMLTKVMALELGPHK--IRVNAVNPTVVMTSMGQ 188

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 94.3 bits (234), Expect = 2e-23
 Identities = 48/213 (22%), Positives = 75/213 (35%), Gaps = 22/213 (10%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G  A+VTG S G+G   A+ LA  G  V++A RN+    +  + + ++    +  A   
Sbjct: 4   RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG-VETMAFRC 62

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIM-ASPFMLSKDNIELQFATNHLGHFLLTH 146
           DVS+   V+K       +   L+ ++N AGI    P     +   L      +   L   
Sbjct: 63  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPA----EEFPLDEFRQVIEVNLFGT 118

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI 206
             +     +  + S    I+N+ S          I                Y  SK    
Sbjct: 119 YYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISA--------------YAASKGGVA 164

Query: 207 LHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
              K LAK     G  I  N + PG   T +  
Sbjct: 165 SLTKALAKEWGRYG--IRVNVIAPGWYRTKMTE 195

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 94.7 bits (235), Expect = 3e-23
 Identities = 41/217 (18%), Positives = 70/217 (32%), Gaps = 36/217 (16%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G   ++TG +SG+G          G  V +  ++     ++            V  +  
Sbjct: 4   KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH-----GDNVLGIVG 58

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGI-------MASPFMLSKDNIELQFATNHLG 140
           DV SL   ++ AS   ++   ++ LI NAGI       +  P        +  F  N  G
Sbjct: 59  DVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKG 118

Query: 141 HFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQ 200
           +       L  +       SR   I  +S+                           Y  
Sbjct: 119 YIHAVKACLPALVA-----SRGNVIFTISNAGFY----------------PNGGGPLYTA 157

Query: 201 SKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNL 237
           +K A +   +ELA  L      +  N +  G I ++L
Sbjct: 158 AKHAIVGLVRELAFEL---APYVRVNGVGSGGINSDL 191

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 93.3 bits (231), Expect = 6e-23
 Identities = 45/224 (20%), Positives = 80/224 (35%), Gaps = 34/224 (15%)

Query: 28  TGLTAIVTGASSGIGTETARVLA---LRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDA 84
                ++TGAS G G   A  LA     G  ++++ R+ +  + ++E +  + P  KV  
Sbjct: 5   GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVL 64

Query: 85  MELDVSSLASVRKFASEYNSQGRP----LNILINNAGIMASPFM-----LSKDNIELQFA 135
              D+ + A V++  S      RP      +LINNA  +               +   +A
Sbjct: 65  AAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWA 124

Query: 136 TNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSF 195
            N      LT   L+  + +         +VN+SS      Y                 +
Sbjct: 125 LNLTSMLCLTSGTLNAFQDSPG---LSKTVVNISSLCALQPYKG---------------W 166

Query: 196 GAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
           G Y   K A  +  + LA        ++   S  PG +  ++ +
Sbjct: 167 GLYCAGKAARDMLYQVLAAEEP----SVRVLSYAPGPLDNDMQQ 206

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 93.2 bits (231), Expect = 7e-23
 Identities = 30/212 (14%), Positives = 56/212 (26%), Gaps = 33/212 (15%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
           TAIVT      G  +A  L+  G  V           D       E+ +      +L   
Sbjct: 2   TAIVTNVKHFGGMGSALRLSEAGHTVACH--------DESFKQKDELEAFAETYPQLKPM 53

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGIM--ASPFM-LSKDNIELQFATNHLGHFLLTHL 147
           S     +      S    +++L++N        P    + ++         +  F L + 
Sbjct: 54  SEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNA 113

Query: 148 LLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANIL 207
           +   M                     +      I          +     Y  ++     
Sbjct: 114 VASQM--------------------KKRKSGHIIFITSATPFGPWKELSTYTSARAGACT 153

Query: 208 HAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
            A  L+K L E    I   ++ P  + +    
Sbjct: 154 LANALSKELGEYN--IPVFAIGPNYLHSEDSP 183

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 92.8 bits (230), Expect = 7e-23
 Identities = 44/214 (20%), Positives = 77/214 (35%), Gaps = 32/214 (14%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
                ++TGA+ GIG  T  + A  G  ++         ++  EA+           + +
Sbjct: 4   KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------GAHPVVM 56

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAG--IMASPFMLSKDNIELQFATNHLGHFLLT 145
           DV+  ASV +  +E  +    L+ +++ AG       + +  ++ EL    N  G FL+ 
Sbjct: 57  DVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVA 116

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
               + M++        G IV  +S  +                        Y  S    
Sbjct: 117 KAASEAMRE-----KNPGSIVLTASRVYL----------------GNLGQANYAASMAGV 155

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
           +   + LA  L   G  I  N+L PG I T +  
Sbjct: 156 VGLTRTLALELGRWG--IRVNTLAPGFIETRMTA 187

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 93.2 bits (231), Expect = 8e-23
 Identities = 44/216 (20%), Positives = 74/216 (34%), Gaps = 28/216 (12%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
               AI+TG + GIG  TA++    G  V++A      G+ V   I        +  +  
Sbjct: 5   QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP---DVISFVHC 61

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIM----ASPFMLSKDNIELQFATNHLGHFL 143
           DV+    VR       ++   L+I+  N G++     S      ++ +     N  G FL
Sbjct: 62  DVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFL 121

Query: 144 LTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKL 203
           +               +++G IV  +S +   A                     Y  +K 
Sbjct: 122 VAKHAAR-----VMIPAKKGSIVFTASISSFTA--------------GEGVSHVYTATKH 162

Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
           A +     L   L E G  I  N + P  + + L  
Sbjct: 163 AVLGLTTSLCTELGEYG--IRVNCVSPYIVASPLLT 196

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 92.0 bits (228), Expect = 2e-22
 Identities = 60/232 (25%), Positives = 91/232 (39%), Gaps = 28/232 (12%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
            A+VTGA  GIG E A++LA    HVI   R   +   V + I       +      DVS
Sbjct: 12  VALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGDVS 69

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLD 150
               + +  ++  ++ + ++IL+NNAGI      L   N E +     L   L +   + 
Sbjct: 70  KKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWED---VLRTNLNSLFYIT 126

Query: 151 TMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAK 210
                   ++R GRI+N+SS                           Y  SK   I   K
Sbjct: 127 QPISKRMINNRYGRIINISSIVGLTGNV---------------GQANYSSSKAGVIGFTK 171

Query: 211 ELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQG 262
            LAK L      IT N++ PG I +++             + K ++ NIP G
Sbjct: 172 SLAKELASRN--ITVNAIAPGFISSDMTDK------ISEQIKKNIISNIPAG 215

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 91.7 bits (227), Expect = 2e-22
 Identities = 41/212 (19%), Positives = 72/212 (33%), Gaps = 19/212 (8%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
           T    ++TG  SG+G  TA  LA  G  + +   +    +  + A+++  P A+V     
Sbjct: 3   TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVA 62

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHL 147
           DVS  A V  + +    +   ++   NNAGI         ++         +   L    
Sbjct: 63  DVSDEAQVEAYVTATTERFGRIDGFFNNAGIE--GKQNPTESFTAAEFDKVVSINLRGVF 120

Query: 148 LLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANIL 207
           L         +    G +VN +S                       +   Y  +K   + 
Sbjct: 121 LGLEKVLKIMREQGSGMVVNTASVGGIRGIG---------------NQSGYAAAKHGVVG 165

Query: 208 HAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
             +  A      G  I  N++ PG+I T +  
Sbjct: 166 LTRNSAVEYGRYG--IRINAIAPGAIWTPMVE 195

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 91.3 bits (226), Expect = 3e-22
 Identities = 51/236 (21%), Positives = 88/236 (37%), Gaps = 30/236 (12%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G  AI+TGA +GIG E A   A  G  V+++  N  A   V + I +     +  A   
Sbjct: 10  DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRC 67

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIM-ASPFMLSKDNIELQFATNHLGHFLLTH 146
           D++S   +   A    S+   ++IL+NNAG     PF +   +    +  N    F L+ 
Sbjct: 68  DITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQ 127

Query: 147 LLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI 206
           L+   M+K                          +  +  N      +      S L   
Sbjct: 128 LVAPEMEKNGG---------------GVILTITSMAAENKNINMTSYASSKAAASHLVRN 172

Query: 207 LHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQG 262
           + A +L +       NI  N + PG+I+T+  +           + + +L++ P  
Sbjct: 173 M-AFDLGEK------NIRVNGIAPGAILTDALK-----SVITPEIEQKMLQHTPIR 216

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 91.0 bits (225), Expect = 3e-22
 Identities = 44/217 (20%), Positives = 84/217 (38%), Gaps = 33/217 (15%)

Query: 32  AIVTGASSGIGTETARVLALRGVH-------VIMAVRNMAAGKDVREAIVKEIPSAKVDA 84
            ++TGA  GIG   A   A    H       ++++ R  A  + +      E   A  D 
Sbjct: 4   LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDT 61

Query: 85  MELDVSSLASVRKFASEYNSQGRPLNILINNAGIM--ASPFMLSKDNIELQFATNHLGHF 142
           +  D+S +A VR+  +    +   ++ L+NNAG+    +   L++++ +    TN  G F
Sbjct: 62  ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTF 121

Query: 143 LLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSK 202
            LT  L   M++        G I  ++S A   A+                    Y  SK
Sbjct: 122 FLTQALFALMER-----QHSGHIFFITSVAATKAFR---------------HSSIYCMSK 161

Query: 203 LANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
                  + +  + ++    +    + PG++ T ++ 
Sbjct: 162 FGQRGLVETMRLYARKCN--VRITDVQPGAVYTPMWG 196

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 89.4 bits (221), Expect = 1e-21
 Identities = 59/264 (22%), Positives = 93/264 (35%), Gaps = 43/264 (16%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAMELDV 89
            +VTGAS GIG   A  L   G  V++     A      E + K+I +   +      DV
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAA---EEVSKQIEAYGGQAITFGGDV 60

Query: 90  SSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATN--HLGHFLLTHL 147
           S  A V             +++++NNAGI     ++     +     +    G FL T  
Sbjct: 61  SKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQA 120

Query: 148 LLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANIL 207
               M K      R+GRI+N++S                           Y  +K   I 
Sbjct: 121 ATKIMMK-----KRKGRIINIASVVGLIGNI---------------GQANYAAAKAGVIG 160

Query: 208 HAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQG----- 262
            +K  A+        I  N + PG I +++             + K +L  IP G     
Sbjct: 161 FSKTAAREGASRN--INVNVVCPGFIASDMT------AKLGEDMEKKILGTIPLGRTGQP 212

Query: 263 ---AATTCYVALHPQVQGVSGEYF 283
              A    ++AL P    ++G+ F
Sbjct: 213 ENVAGLVEFLALSPAASYITGQAF 236

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.9 bits (222), Expect = 2e-21
 Identities = 37/212 (17%), Positives = 63/212 (29%), Gaps = 26/212 (12%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNM--AAGKDVREAIVKEI--PSAKVDAMEL 87
            ++TG SSGIG   A  LA            +     +       + +  P   ++ ++L
Sbjct: 5   VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHL 147
           DV    SV             + +     G++     L +D +      N +G   +   
Sbjct: 65  DVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQA 124

Query: 148 LLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANIL 207
            L  MK+        GR++   S                           Y  SK A   
Sbjct: 125 FLPDMKR-----RGSGRVLVTGSVGGLMGLP---------------FNDVYCASKFALEG 164

Query: 208 HAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
             + LA  L   G  +  + +  G + T    
Sbjct: 165 LCESLAVLLLPFG--VHLSLIECGPVHTAFME 194

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 89.4 bits (221), Expect = 2e-21
 Identities = 50/246 (20%), Positives = 85/246 (34%), Gaps = 37/246 (15%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAM 85
            G  A+ TGA  GIG   A  L  RG  V++   +        E +V E+     +  A+
Sbjct: 5   AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGS---SSKAAEEVVAELKKLGAQGVAI 61

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGI--MASPFMLSKDNIELQFATNHLGHFL 143
           + D+S  + V     +  S    L+ +++N+G+        ++++  +  F  N  G F 
Sbjct: 62  QADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFF 121

Query: 144 LTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKL 203
           +    L   ++        GRI+  SS A                         Y  SK 
Sbjct: 122 VAQQGLKHCRRG-------GRIILTSSIAAVMTGIPN--------------HALYAGSKA 160

Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVG-------KLVL 256
           A     +  A      G  +T N + PG + T++F  N          G       + + 
Sbjct: 161 AVEGFCRAFAVDCGAKG--VTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLA 218

Query: 257 KNIPQG 262
              P  
Sbjct: 219 NMNPLK 224

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 89.1 bits (220), Expect = 2e-21
 Identities = 59/214 (27%), Positives = 84/214 (39%), Gaps = 24/214 (11%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G  A+VTG++SGIG   A  LA +G  +++     AA  +   A +      KV     
Sbjct: 3   KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGA 62

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIM--ASPFMLSKDNIELQFATNHLGHFLLT 145
           D+S   +VR        Q   ++IL+NNAGI   A       +  +   A N    F  T
Sbjct: 63  DLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGT 122

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
              L  MKK        GRI+N++S                    A  +  AY  +K   
Sbjct: 123 AAALPHMKK-----QGFGRIINIASAHGLV---------------ASANKSAYVAAKHGV 162

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
           +   K  A      G  ITAN++ PG + T L  
Sbjct: 163 VGFTKVTALETAGQG--ITANAICPGWVRTPLVE 194

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 88.6 bits (219), Expect = 3e-21
 Identities = 48/214 (22%), Positives = 79/214 (36%), Gaps = 29/214 (13%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
           TG  A+V+G + G+G    R +   G  V+        GK +   +     +     + L
Sbjct: 5   TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL-----ADAARYVHL 59

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFML--SKDNIELQFATNHLGHFLLT 145
           DV+  A  +       +    L++L+NNAGI+    +   +    +     N  G FL  
Sbjct: 60  DVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGI 119

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
             ++  MK+     +  G I+N+SS                       +   Y  +K A 
Sbjct: 120 RAVVKPMKE-----AGRGSIINISSIEGLA---------------GTVACHGYTATKFAV 159

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
               K  A  L   G  I  NS+HPG + T +  
Sbjct: 160 RGLTKSTALELGPSG--IRVNSIHPGLVKTPMTD 191

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 89.4 bits (221), Expect = 3e-21
 Identities = 48/235 (20%), Positives = 82/235 (34%), Gaps = 23/235 (9%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G  A +TG  +G+G     +L+  G   ++A R M   K   E I  +  + KV A++ 
Sbjct: 24  QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGN-KVHAIQC 82

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHL 147
           DV     V+   SE        NI+INNA    +    ++      + T        T  
Sbjct: 83  DVRDPDMVQNTVSELIKVAGHPNIVINNA--AGNFISPTERLSPNAWKTITDIVLNGTAF 140

Query: 148 LLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANIL 207
           +   + K   K+ +    +++++                   +          +K     
Sbjct: 141 VTLEIGKQLIKAQKGAAFLSITTIYAE---------------TGSGFVVPSASAKAGVEA 185

Query: 208 HAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQG 262
            +K LA    + G  +  N + PG I T          G   T  K ++  IP G
Sbjct: 186 MSKSLAAEWGKYG--MRFNVIQPGPIKTKGAFSRLDPTG---TFEKEMIGRIPCG 235

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.1 bits (215), Expect = 1e-20
 Identities = 47/237 (19%), Positives = 82/237 (34%), Gaps = 34/237 (14%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G   I+T A+ GIG   A   A  G  VI    N +  +++ +      P  +   ++ 
Sbjct: 5   DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKY-----PGIQTRVLD- 58

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGI--MASPFMLSKDNIELQFATNHLGHFLLT 145
                 + +K   ++ ++   L++L N AG     +     + + +     N    +L+ 
Sbjct: 59  -----VTKKKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMI 113

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
              L  M        + G I+N+SS A                     +   Y  +K A 
Sbjct: 114 KAFLPKMLA-----QKSGNIINMSSVASSVK--------------GVVNRCVYSTTKAAV 154

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQG 262
           I   K +A    + G  I  N + PG++ T   +     RG         LK    G
Sbjct: 155 IGLTKSVAADFIQQG--IRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTG 209

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 85.6 bits (211), Expect = 5e-20
 Identities = 49/215 (22%), Positives = 71/215 (33%), Gaps = 27/215 (12%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G   +VTGA   IG  TA  LA  G  + +   N  A +    ++ ++    +  +   
Sbjct: 4   NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVC 61

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNA---GIMASPFMLSKDNIELQFATNHLGHFLL 144
           DV+S  +V             ++ L NNA   G  A       D+       N  G F +
Sbjct: 62  DVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHV 121

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
              +   M          GRIVN +S A                        AYG SK A
Sbjct: 122 LKAVSRQMIT-----QNYGRIVNTASMAGVKGPPN---------------MAAYGTSKGA 161

Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
            I   +  A  L      I  N++ PG +      
Sbjct: 162 IIALTETAALDLAPYN--IRVNAISPGYMGPGFMW 194

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 84.8 bits (209), Expect = 7e-20
 Identities = 49/216 (22%), Positives = 89/216 (41%), Gaps = 28/216 (12%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAM 85
            G   ++TG+S+G+G   A   A     V++  R+    +D   ++++EI     +  A+
Sbjct: 6   EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRS---KEDEANSVLEEIKKVGGEAIAV 62

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGIM--ASPFMLSKDNIELQFATNHLGHFL 143
           + DV+  + V         +   L+++INNAG+    S   +S  +      TN  G FL
Sbjct: 63  KGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFL 122

Query: 144 LTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKL 203
            +   +    K   ++  +G ++N+SS   +  +                 F  Y  SK 
Sbjct: 123 GSREAI----KYFVENDIKGTVINMSSVHEKIPWPL---------------FVHYAASKG 163

Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
              L  + LA      G  I  N++ PG+I T +  
Sbjct: 164 GMKLMTETLALEYAPKG--IRVNNIGPGAINTPINA 197

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 84.0 bits (207), Expect = 1e-19
 Identities = 51/237 (21%), Positives = 82/237 (34%), Gaps = 38/237 (16%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
           +G T +VTGA+SGIG     + A  G  ++   R      +   A+      A+  A+  
Sbjct: 4   SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVA 58

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIM--ASPFMLSKDNIELQFATNHLGHFLLT 145
           DVS   +V    +E   +   L+ + + AG+   A  + L  +  E     N  G FL+ 
Sbjct: 59  DVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVA 118

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
               + +++          +V   S A                         Y   KL  
Sbjct: 119 RKAGEVLEEGGS-------LVLTGSVAGLG----------------AFGLAHYAAGKLGV 155

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQG 262
           +  A+ LA  L   G  +  N L PG I T +        G      +  +   P G
Sbjct: 156 VGLARTLALELARKG--VRVNVLLPGLIQTPMT------AGLPPWAWEQEVGASPLG 204

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 83.6 bits (206), Expect = 2e-19
 Identities = 48/211 (22%), Positives = 78/211 (36%), Gaps = 20/211 (9%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
              A+VTGA+SGIG E AR L   G+ V +  R     +   + + +     + D    D
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTCD 59

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLL 148
           V S+  +    +    +  P+++L+NNAG        ++   EL           +  + 
Sbjct: 60  VRSVPEIEALVAAVVERYGPVDVLVNNAGRP-GGGATAELADELWLDVVETNLTGVFRVT 118

Query: 149 LDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILH 208
              +K         GRIVN++S   +                       Y  SK   +  
Sbjct: 119 KQVLKAGGMLERGTGRIVNIASTGGKQGVVH---------------AAPYSASKHGVVGF 163

Query: 209 AKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
            K L   L   G  IT N++ PG + T +  
Sbjct: 164 TKALGLELARTG--ITVNAVCPGFVETPMAA 192

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 82.9 bits (204), Expect = 3e-19
 Identities = 59/237 (24%), Positives = 93/237 (39%), Gaps = 35/237 (14%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G  A+VTGAS GIG   A  LA RG  VI    +    + + + +      A    + L
Sbjct: 3   EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL-----GANGKGLML 57

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQF--ATNHLGHFLLT 145
           +V+  AS+     +  ++   ++IL+NNAGI     ++   + E      TN    F L+
Sbjct: 58  NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS 117

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
             ++  M K      R GRI+ + S                           Y  +K   
Sbjct: 118 KAVMRAMMK-----KRHGRIITIGSVVGTMGNG---------------GQANYAAAKAGL 157

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQG 262
           I  +K LA+ +   G  IT N + PG I T++       R   +     +L  +P G
Sbjct: 158 IGFSKSLAREVASRG--ITVNVVAPGFIETDMT------RALSDDQRAGILAQVPAG 206

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 82.1 bits (202), Expect = 9e-19
 Identities = 47/216 (21%), Positives = 80/216 (37%), Gaps = 30/216 (13%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA--KVDAM 85
            G  A+VTGA  GIG E A  L  RG  VI+   N     +  E +V  I         +
Sbjct: 17  EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYAN---STESAEEVVAAIKKNGSDAACV 73

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQ--FATNHLGHFL 143
           + +V  +  + +   E       L+I+ +N+G+++   +      E    F  N  G F 
Sbjct: 74  KANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQF- 132

Query: 144 LTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKL 203
                    ++  +     GR++ + S   +                       Y  SK 
Sbjct: 133 ------FVAREAYKHLEIGGRLILMGSITGQAKA--------------VPKHAVYSGSKG 172

Query: 204 ANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
           A    A+ +A  + +    IT N + PG I T+++ 
Sbjct: 173 AIETFARCMAIDMADKK--ITVNVVAPGGIKTDMYH 206

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 81.3 bits (200), Expect = 1e-18
 Identities = 60/238 (25%), Positives = 83/238 (34%), Gaps = 27/238 (11%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G TA+VTG S GIG      LA  G  V    RN     +  E   ++     V+    
Sbjct: 5   KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVC 62

Query: 88  DVSSLASVRKFASEYNSQ-GRPLNILINNA--GIMASPFMLSKDNIELQFATNHLGHFLL 144
           D+ S     K            LNIL+NNA   I       ++ +  +   TN    + L
Sbjct: 63  DLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHL 122

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
           +      +     K+S+ G ++ +SS               I   SA  S   Y  SK A
Sbjct: 123 SQ-----IAYPLLKASQNGNVIFLSS---------------IAGFSALPSVSLYSASKGA 162

Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQG 262
                K LA    +D  NI  NS+ PG I+T L                  +   P G
Sbjct: 163 INQMTKSLACEWAKD--NIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMG 218

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 80.9 bits (198), Expect = 2e-18
 Identities = 47/215 (21%), Positives = 78/215 (36%), Gaps = 15/215 (6%)

Query: 31  TAIVTGASSGIGTETARVL---ALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
           + ++TG + G+G    + L        H+    RN    K++ E + K   +  +  ++L
Sbjct: 4   SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKNHSNIHILEIDL 62

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIM---ASPFMLSKDNIELQFATNHLGHFLL 144
                        E  ++ + LN+L NNAGI    A    +    +     TN +   +L
Sbjct: 63  RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIML 122

Query: 145 THLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
               L  +KK     + E + + V   A     S           +      AY  SK A
Sbjct: 123 AKACLPLLKK--AAKANESQPMGVGRAAIINMSS----ILGSIQGNTDGGMYAYRTSKSA 176

Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
                K L+  L      I   SLHPG + T++  
Sbjct: 177 LNAATKSLSVDLYPQR--IMCVSLHPGWVKTDMGG 209

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 80.6 bits (198), Expect = 2e-18
 Identities = 42/214 (19%), Positives = 69/214 (32%), Gaps = 37/214 (17%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
           +A+VTG +SG+G   A  L  RG  V++                       +  +E DV+
Sbjct: 3   SALVTGGASGLGRAAALALKARGYRVVVLDLRREGE--------------DLIYVEGDVT 48

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGIMASPFM-----LSKDNIELQFATNHLGHFLLT 145
               VR+  +    +     ++      +A   +        ++       N LG F + 
Sbjct: 49  REEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVL 108

Query: 146 HLLLDTMKK-TAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
            L    M++       + G IVN +S A                        AY  SK  
Sbjct: 109 RLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI---------------GQAAYAASKGG 153

Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSIVTNLF 238
            +      A+ L   G  I   ++ PG   T L 
Sbjct: 154 VVALTLPAARELAGWG--IRVVTVAPGLFDTPLL 185

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 79.8 bits (196), Expect = 4e-18
 Identities = 46/235 (19%), Positives = 87/235 (37%), Gaps = 39/235 (16%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
              + +VTG + GIG   A+ LA  G  V +  R   A K +               +E+
Sbjct: 6   VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-------------GVEV 52

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHL 147
           DV+   +V +  +       P+ +L++NAG+ A  F++     + +   N          
Sbjct: 53  DVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRV- 111

Query: 148 LLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANIL 207
                   + + ++ GR++ + S +  +                  +   Y  SK   I 
Sbjct: 112 --AQRASRSMQRNKFGRMIFIGSVSGLW---------------GIGNQANYAASKAGVIG 154

Query: 208 HAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQG 262
            A+ +    +    N+TAN + PG I T++       R     + +  L+ IP  
Sbjct: 155 MARSI--ARELSKANVTANVVAPGYIDTDM------TRALDERIQQGALQFIPAK 201

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 79.5 bits (195), Expect = 6e-18
 Identities = 46/211 (21%), Positives = 68/211 (32%), Gaps = 25/211 (11%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
            A+VTGA  GIG   A  L   G  V +A  N A  K V   I +        A+++DVS
Sbjct: 3   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVS 60

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQF--ATNHLGHFLLTHLL 148
               V     +        ++++NNAG+  S  + S     +      N  G        
Sbjct: 61  DRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAA 120

Query: 149 LDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILH 208
           ++  KK                  +                        Y  SK A    
Sbjct: 121 VEAFKKEGHGGKIINACSQAGHVGNPELA-------------------VYSSSKFAVRGL 161

Query: 209 AKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
            +  A+ L   G  IT N   PG + T ++ 
Sbjct: 162 TQTAARDLAPLG--ITVNGYCPGIVKTPMWA 190

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 78.7 bits (193), Expect = 9e-18
 Identities = 29/214 (13%), Positives = 56/214 (26%), Gaps = 35/214 (16%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
               +V G    +G+   +    R   V                         V   +  
Sbjct: 2   ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVI---------VKMTDSF 52

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSK---DNIELQFATNHLGHFLLT 145
                 V     +     + ++ ++  AG  A     SK    N +L +  +     + +
Sbjct: 53  TEQADQVTAEVGKLLGDQK-VDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISS 111

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
           HL    +K         G +    ++A                         YG +K A 
Sbjct: 112 HLATKHLK-------EGGLLTLAGAKAALD---------------GTPGMIGYGMAKGAV 149

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
               + LA           A ++ P ++ T + R
Sbjct: 150 HQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNR 183

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 74.8 bits (183), Expect = 3e-16
 Identities = 45/214 (21%), Positives = 78/214 (36%), Gaps = 28/214 (13%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
            G TA++TG++ GIG   A      G  V +A  N+ A +     I          A+ L
Sbjct: 4   DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI-----GPAACAIAL 58

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIM--ASPFMLSKDNIELQFATNHLGHFLLT 145
           DV+  AS+ +  +E   +   ++IL+NNA +   A    +++++ +  FA N  G   + 
Sbjct: 59  DVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMM 118

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
             +   M                          + I              G Y  +K A 
Sbjct: 119 QAVARAMIA-------------------GGRGGKIINMASQAGRRGEALVGVYCATKAAV 159

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
           I   +    +L   G  I  N++ PG +    + 
Sbjct: 160 ISLTQSAGLNLIRHG--INVNAIAPGVVDGEHWD 191

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.4 bits (179), Expect = 8e-16
 Identities = 40/215 (18%), Positives = 68/215 (31%), Gaps = 21/215 (9%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
           GL A++TG +SG+G  TA  L  +G   ++     + G+   + +      A  D     
Sbjct: 5   GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEK 64

Query: 89  VSSLASVRKFASEYNSQGRPLNILINNAG---IMASPFMLSKDNIELQFATNHLGHFLLT 145
               A                   I  A     +      + ++ +     N +G F + 
Sbjct: 65  DVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVI 124

Query: 146 HLLLDTMKKTAQK-SSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLA 204
            L+   M +       + G I+N +S A                        AY  SK  
Sbjct: 125 RLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQV---------------GQAAYSASKGG 169

Query: 205 NILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
            +     +A+ L   G  I   ++ PG   T L  
Sbjct: 170 IVGMTLPIARDLAPIG--IRVMTIAPGLFGTPLLT 202

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 73.4 bits (179), Expect = 1e-15
 Identities = 36/213 (16%), Positives = 64/213 (30%), Gaps = 16/213 (7%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDA------ 84
            A++TG +  IG   A  L  +G  V++  R+    +   + +V E+ +A+  +      
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFRVVVHYRH---SEGAAQRLVAELNAARAGSAVLCKG 59

Query: 85  -MELDVSSLASVRKFASEYNSQGRPLNILINNAGI-MASPFMLSKDNIELQFATNHLGHF 142
            + L  S L                 ++L+NNA     +P +   D      A       
Sbjct: 60  DLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQV 119

Query: 143 LLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSK 202
                   +         R          A R      +       +     F  Y  +K
Sbjct: 120 AELF---GSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAK 176

Query: 203 LANILHAKELAKHLKEDGVNITANSLHPGSIVT 235
            A     +  A  L      I  N++ PG  + 
Sbjct: 177 HALGGLTRAAALELAPRH--IRVNAVAPGLSLL 207

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 71.4 bits (174), Expect = 3e-15
 Identities = 30/211 (14%), Positives = 56/211 (26%), Gaps = 35/211 (16%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSS 91
            IV G    +G+         G  V+    +  A       I+ +      +  +  +  
Sbjct: 5   VIVYGGKGALGSAILEFFKKNGYTVLNIDLS--ANDQADSNILVDGNKNWTEQEQSILEQ 62

Query: 92  LASVRKFASEYNSQGRPLNILINNAGIMASPFML---SKDNIELQFATNHLGHFLLTHLL 148
            AS  + +         ++ +   AG  A           N +L    +     +   L 
Sbjct: 63  TASSLQGS--------QVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLA 114

Query: 149 LDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILH 208
              +K         G +    + A                     S   YG +K A    
Sbjct: 115 TTHLK-------PGGLLQLTGAAAAM---------------GPTPSMIGYGMAKAAVHHL 152

Query: 209 AKELAKHLKEDGVNITANSLHPGSIVTNLFR 239
              LA        N    ++ P ++ T + R
Sbjct: 153 TSSLAAKDSGLPDNSAVLTIMPVTLDTPMNR 183

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 69.1 bits (168), Expect = 3e-14
 Identities = 29/214 (13%), Positives = 60/214 (28%), Gaps = 33/214 (15%)

Query: 25  IDGTGLTAIVTGASS--GIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKV 82
           +D +G  A+V G ++   +G   A  L   G  V ++ +      +  +           
Sbjct: 4   VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEK---LAEALGGA 60

Query: 83  DAMELDVSSLASVRKFASEYNSQGRPLNILINNA------GIMASPFMLSKDNIELQFAT 136
                DV+    +    +        L+ L++         +        + +  L    
Sbjct: 61  LLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEV 120

Query: 137 NHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFG 196
           +      +       +++        G IV ++  A                      + 
Sbjct: 121 SAYSLVAVARRAEPLLREG-------GGIVTLTYYASEKVVP---------------KYN 158

Query: 197 AYGQSKLANILHAKELAKHLKEDGVNITANSLHP 230
               +K A     + LA  L   GV + A S  P
Sbjct: 159 VMAIAKAALEASVRYLAYELGPKGVRVNAISAGP 192

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 68.4 bits (166), Expect = 5e-14
 Identities = 30/237 (12%), Positives = 70/237 (29%), Gaps = 26/237 (10%)

Query: 28  TGLTAIVTGASS--GIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAM 85
           +G   +VTG +S   I    A+ +   G  +    +N      V E             +
Sbjct: 4   SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEF---AAQLGSDIVL 60

Query: 86  ELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLT 145
           + DV+  AS+    +E        +  +++ G      +       +      + H + +
Sbjct: 61  QCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISS 120

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
           +  +   K      +    ++ +S      A                 ++   G +K + 
Sbjct: 121 YSFVAMAKACRSMLNPGSALLTLSYLGAERAIP---------------NYNVMGLAKASL 165

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQG 262
             + + +A  +  +G  +  N++  G I T               +        P  
Sbjct: 166 EANVRYMANAMGPEG--VRVNAISAGPIRTLAASGI----KDFRKMLAHCEAVTPIR 216

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 66.6 bits (162), Expect = 2e-13
 Identities = 40/237 (16%), Positives = 66/237 (27%), Gaps = 46/237 (19%)

Query: 28  TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL 87
                +V  AS GIG   A VL+  G  V +  RN    K      V             
Sbjct: 3   RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVV------------ 50

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNA--GIMASPFMLSKDNIELQFATNHLGHFLLT 145
                  +RK       + + ++IL+ NA          L+ ++ +    +  L    + 
Sbjct: 51  -----CDLRKDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIV 105

Query: 146 HLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLAN 205
              L  M                        +   +     +  S   +      +++A 
Sbjct: 106 RNYLPAM--------------------KEKGWGRIVAITSFSVISPIENLYTSNSARMAL 145

Query: 206 ILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQG 262
               K L+  +   G  IT N + PG   T   +             K V   IP  
Sbjct: 146 TGFLKTLSFEVAPYG--ITVNCVAPGWTETERVK-----ELLSEEKKKQVESQIPMR 195

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 58.0 bits (139), Expect = 2e-10
 Identities = 18/89 (20%), Positives = 37/89 (41%), Gaps = 20/89 (22%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSS 91
            +++G ++GIG  T +VL   G  ++          D+R+A V             D+S+
Sbjct: 4   IVISGCATGIGAATRKVLEAAGHQIVGI--------DIRDAEVIA-----------DLST 44

Query: 92  LASVRK-FASEYNSQGRPLNILINNAGIM 119
               ++  A       + ++ L+  AG+ 
Sbjct: 45  AEGRKQAIADVLAKCSKGMDGLVLCAGLG 73

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 55.4 bits (132), Expect = 2e-09
 Identities = 18/105 (17%), Positives = 31/105 (29%), Gaps = 17/105 (16%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKE--------------- 76
           A+VTGA+  +G   A  L   G  V +     AA  +   A +                 
Sbjct: 5   ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 64

Query: 77  --IPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIM 119
                         V+      +  +   +     ++L+NNA   
Sbjct: 65  VATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSF 109

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 54.0 bits (129), Expect = 7e-09
 Identities = 27/213 (12%), Positives = 67/213 (31%), Gaps = 15/213 (7%)

Query: 33  IVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSL 92
           ++TG +  IG+   R +       ++ +  +    +  E++     S + +    D+   
Sbjct: 4   LITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN-LESLSDISESNRYNFEHADICDS 62

Query: 93  ASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTM 152
           A + +   +Y       + +++ A         S         TN +G + L  +     
Sbjct: 63  AEITRIFEQYQ-----PDAVMHLAAESHVD--RSITGPAAFIETNIVGTYALLEVARKYW 115

Query: 153 KKTAQKSSREGRIVNVSSEA------HRFAYSEGIRFDKINDESAYNSFGAYGQSKLANI 206
               +      R  ++S++       H       +      + +AY     Y  SK ++ 
Sbjct: 116 SALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSD 175

Query: 207 LHAKELAKHLKEDGVNI-TANSLHPGSIVTNLF 238
              +   +      +    +N+  P      L 
Sbjct: 176 HLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLI 208

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 49.2 bits (116), Expect = 2e-07
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 31 TAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAI 73
          T +VTG + G+G + AR LA RG  H+++  R+        E +
Sbjct: 11 TVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELV 54

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 48.2 bits (113), Expect = 5e-07
 Identities = 13/62 (20%), Positives = 22/62 (35%), Gaps = 2/62 (3%)

Query: 25 IDGTGLTAIVTGASS--GIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKV 82
          ID  G  A + G +   G G   A+ LA  G  +++     A           +   ++V
Sbjct: 4  IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRV 63

Query: 83 DA 84
            
Sbjct: 64 LP 65

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 47.3 bits (111), Expect = 1e-06
 Identities = 39/227 (17%), Positives = 78/227 (34%), Gaps = 22/227 (9%)

Query: 33  IVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSL 92
           +VTG S  IG+ T   L   G  VI  + N+   K     +++ +       +E D+ + 
Sbjct: 4   LVTGGSGYIGSHTCVQLLQNGHDVI-ILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNE 62

Query: 93  ASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTM 152
           A + +   ++      ++ +I+ AG+ A     S       +  N  G    T  L+  M
Sbjct: 63  ALMTEILHDHA-----IDTVIHFAGLKAVG--ESVQKPLEYYDNNVNG----TLRLISAM 111

Query: 153 KKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKEL 212
           +    K       +  S       Y +  +   +           YG+SKL       +L
Sbjct: 112 RAANVK-----NFIFSS---SATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDL 163

Query: 213 AKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNI 259
            K   +  + +       G+  +     +   +G  N +   + +  
Sbjct: 164 QKAQPDWSIALLRYFNPVGAHPSGDMGEDP--QGIPNNLMPYIAQVA 208

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 47.0 bits (110), Expect = 1e-06
 Identities = 9/46 (19%), Positives = 17/46 (36%), Gaps = 2/46 (4%)

Query: 28 TGLTAIVTGASS--GIGTETARVLALRGVHVIMAVRNMAAGKDVRE 71
           G   ++ G ++   I    A+    +G  +     N +  K VR 
Sbjct: 4  KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRP 49

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 45.8 bits (107), Expect = 1e-06
 Identities = 17/205 (8%), Positives = 47/205 (22%), Gaps = 23/205 (11%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
            A++ G    +G   A  LA  G  +++  R     +       +    A +  M+ + +
Sbjct: 3   VALLGGTG-NLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDA 61

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLD 150
           + A      +            + N                      +        ++ +
Sbjct: 62  AEACDIAVLTIPWEHAIDTARDLKNILREKIVVSPLVPVSRGAKGFTYSSERSAAEIVAE 121

Query: 151 TMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAK 210
            ++     S+         +                           +      +   +K
Sbjct: 122 VLESEKVVSALHTIPAARFANLDE--------------------KFDWDVPVCGDDDESK 161

Query: 211 ELAKHLKEDGVNITANSLHPGSIVT 235
           ++   L  +        L  G +  
Sbjct: 162 KVVMSLISEI--DGLRPLDAGPLSN 184

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 46.0 bits (108), Expect = 3e-06
 Identities = 29/196 (14%), Positives = 58/196 (29%), Gaps = 20/196 (10%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL--- 87
            A++TG +   G+  A  L  +G  V    R  ++    R   + + P        L   
Sbjct: 3   VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYG 62

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHL 147
           D+S  +++ +   E                   S   +S ++ E     + +G    T  
Sbjct: 63  DLSDTSNLTRILREV-------QPDEVYNLGAMSHVAVSFESPEYTADVDAMG----TLR 111

Query: 148 LLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANIL 207
           LL+ ++    +     R    S+      Y          + + +     Y  +KL    
Sbjct: 112 LLEAIRFLGLEKKT--RFYQASTSE---LYGLVQEI-PQKETTPFYPRSPYAVAKLYAYW 165

Query: 208 HAKELAKHLKEDGVNI 223
                 +       N 
Sbjct: 166 ITVNYRESYGMYACNG 181

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 44.1 bits (103), Expect = 4e-06
 Identities = 21/149 (14%), Positives = 44/149 (29%), Gaps = 16/149 (10%)

Query: 22  TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAK 81
             G    G  A+V   +  +G  +A +LA  G  V++  R +   +   +++ K      
Sbjct: 16  AAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNV 75

Query: 82  VDAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGH 141
             A   D +S A   K            + +           +L +   + + +   +  
Sbjct: 76  TAAETADDASRAEAVK----------GAHFVFTAGA--IGLELLPQAAWQNESSIEIVAD 123

Query: 142 FLLTHLLLDTMKKTAQKSSREGRIVNVSS 170
           +     L         K    G+      
Sbjct: 124 YNAQPPLGIGGIDATDK----GKEYGGKR 148

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 44.4 bits (103), Expect = 7e-06
 Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 5/53 (9%)

Query: 28 TGLTAIVTGA--SSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIP 78
           G   +V+G    S I    ARV   +G  +++   +        + I   +P
Sbjct: 5  DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLI---QRITDRLP 54

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.2 bits (96), Expect = 8e-05
 Identities = 30/193 (15%), Positives = 59/193 (30%), Gaps = 31/193 (16%)

Query: 33  IVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSL 92
           ++TG +  +G+     L + G  V   V N   G+  +  +   I     + +  DV   
Sbjct: 5   LITGGAGFVGSHLTDKLMMDGHEVT-VVDNFFTGR--KRNVEHWIGHENFELINHDVVEP 61

Query: 93  ASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTM 152
             +             ++ + + A   + P      N      TN +G    T  +L   
Sbjct: 62  LYIE------------VDQIYHLASPASPP--NYMYNPIKTLKTNTIG----TLNMLGLA 103

Query: 153 KKTAQKSSREGRIVNVSS-EAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKE 211
           K+         R++  S+ E +          D     +       Y + K         
Sbjct: 104 KRVGA------RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYA 157

Query: 212 LAKHLKEDGVNIT 224
                K++GV + 
Sbjct: 158 YM---KQEGVEVR 167

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.7 bits (94), Expect = 1e-04
 Identities = 35/196 (17%), Positives = 62/196 (31%), Gaps = 21/196 (10%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDA----MEL 87
           A++TG +   G+  A  L  +G  V   VR  ++    R   + + P A ++        
Sbjct: 4   ALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYG 63

Query: 88  DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHL 147
           D++    + K  +E                   S   +S D  E     + +G    T  
Sbjct: 64  DLTDSTCLVKIINEVKPT-------EIYNLGAQSHVKISFDLAEYTADVDGVG----TLR 112

Query: 148 LLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANIL 207
           LLD +K     +S   +    S+        E        + + +     YG +KL    
Sbjct: 113 LLDAVKTCGLINSV--KFYQASTSELYGKVQEI----PQKETTPFYPRSPYGAAKLYAYW 166

Query: 208 HAKELAKHLKEDGVNI 223
                 +      VN 
Sbjct: 167 IVVNFREAYNLFAVNG 182

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 40.0 bits (92), Expect = 2e-04
 Identities = 35/193 (18%), Positives = 61/193 (31%), Gaps = 16/193 (8%)

Query: 33  IVTGASSGIGTETARVLALRG--VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
           IVTG +  IG+     +      VHV +  +   AG       ++ I   +V+ +  D++
Sbjct: 6   IVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKAN---LEAILGDRVELVVGDIA 62

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLD 150
               V K A++ +                 S    S ++      TN +G + L      
Sbjct: 63  DAELVDKLAAKAD---------AIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARK 113

Query: 151 TMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAK 210
              +    S+ E        E            +K   E+ YN    Y  +K A+ L  K
Sbjct: 114 YDIRFHHVSTDEVYGDLPLREDL--PGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVK 171

Query: 211 ELAKHLKEDGVNI 223
              +         
Sbjct: 172 AWVRSFGVKATIS 184

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 39.6 bits (91), Expect = 3e-04
 Identities = 35/230 (15%), Positives = 74/230 (32%), Gaps = 26/230 (11%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
           +A+VTG +   G   A++L  +G  V   V   ++    R  + +      +   + D++
Sbjct: 2   SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDT--RWRLRELGIEGDIQYEDGDMA 59

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLD 150
              SV++   +   Q               S    S +        + LG   L      
Sbjct: 60  DACSVQRAVIKAQPQ-------EVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLE---- 108

Query: 151 TMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAK 210
                 ++ S E R    S+          I+ ++ ++ + +     YG +KL       
Sbjct: 109 ----AIRQFSPETRFYQASTS----EMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITV 160

Query: 211 ELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIP 260
              +        + A+S    +  + L     + R   + V ++ L    
Sbjct: 161 NYRES-----FGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQ 205

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 39.8 bits (91), Expect = 3e-04
 Identities = 12/62 (19%), Positives = 25/62 (40%)

Query: 29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELD 88
          G   +VTGA+  + +     L   G  V    R+ +   ++++    + P     A+  D
Sbjct: 11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVED 70

Query: 89 VS 90
          + 
Sbjct: 71 ML 72

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 39.5 bits (90), Expect = 4e-04
 Identities = 8/57 (14%), Positives = 21/57 (36%), Gaps = 2/57 (3%)

Query: 32 AIVTGA--SSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAME 86
            + G   ++G G   A+ L+ R V +I  +        ++     +  +  +   +
Sbjct: 5  CFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD 61

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 39.4 bits (90), Expect = 4e-04
 Identities = 6/56 (10%), Positives = 14/56 (25%)

Query: 34 VTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDV 89
          + G +  IG          G    +  R        +  ++          +E  +
Sbjct: 8  IVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASL 63

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.3 bits (90), Expect = 4e-04
 Identities = 35/189 (18%), Positives = 62/189 (32%), Gaps = 17/189 (8%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
             +VTG +  IG+ T   L   G   +    N++       A ++ +    +   E+D+ 
Sbjct: 3   IVLVTGGAGYIGSHTVVELIENGYDCV-VADNLSNSTYDSVARLEVLTKHHIPFYEVDLC 61

Query: 91  SLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLD 150
               + K   EY      ++ +I+ AG+ A             +  N LG  +L  L+  
Sbjct: 62  DRKGLEKVFKEYK-----IDSVIHFAGLKAVGESTQIPLR--YYHNNILGTVVLLELMQQ 114

Query: 151 TMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAK 210
                        + V  SS       +       I +E        YG +K A      
Sbjct: 115 YNVS---------KFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILN 165

Query: 211 ELAKHLKED 219
           +L    K+ 
Sbjct: 166 DLYNSDKKS 174

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 37.3 bits (85), Expect = 0.002
 Identities = 13/69 (18%), Positives = 20/69 (28%), Gaps = 5/69 (7%)

Query: 31 TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS 90
          T  V GA+   G    RV A  G HV   V ++                  V   +  + 
Sbjct: 5  TIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQ-----AIPNVTLFQGPLL 59

Query: 91 SLASVRKFA 99
          +   +    
Sbjct: 60 NNVPLMDTL 68

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 36.8 bits (84), Expect = 0.003
 Identities = 19/192 (9%), Positives = 52/192 (27%), Gaps = 38/192 (19%)

Query: 33  IVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSL 92
            + G    +G+   R L  RG   +            R+              EL++   
Sbjct: 6   FIAGHRGMVGSAIRRQLEQRGDVEL--------VLRTRD--------------ELNLLDS 43

Query: 93  ASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTM 152
            +V  F +            +  A       + +          N +        ++   
Sbjct: 44  RAVHDFFASERIDQ------VYLAAAKVGGIVANNTYPADFIYQNMMI----ESNIIHAA 93

Query: 153 KKTAQKSSREGRIVNVSS-EAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKE 211
            +         +++ + S   +     + +   ++   +   +   Y  +K+A I   + 
Sbjct: 94  HQNDVN-----KLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCES 148

Query: 212 LAKHLKEDGVNI 223
             +    D  ++
Sbjct: 149 YNRQYGRDYRSV 160

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	313
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	100.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.97
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.82
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.8
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.77
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.76
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.75
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.75
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.75
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.74
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.73
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.73
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.7
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.67
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.67
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.66
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.66
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.65
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.65
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.64
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.64
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.63
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.6
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.57
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.56
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.54
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.35
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.3
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.29
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.27
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.12
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	99.03
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.02
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	98.96
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.28
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.1
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	98.06
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.03
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.02
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.98
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.91
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.89
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.86
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.83
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.8
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.77
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.75
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.74
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.71
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.7
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.69
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.67
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.66
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.65
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.64
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.51
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.49
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.43
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.43
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.43
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.35
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.34
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.3
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	97.28
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.27
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.27
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.27
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	97.26
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.22
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.22
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.21
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.2
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.19
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.16
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.16
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.08
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.08
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.06
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.05
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	97.04
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.02
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	97.01
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.01
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.99
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.96
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.92
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.89
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.82
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.79
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.77
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.73
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.72
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.69
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.68
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.68
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.54
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.53
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.48
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.48
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.42
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.27
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.25
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	95.99
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.97
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.87
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	95.86
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.75
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.74
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	95.63
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.62
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.52
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	95.49
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.48
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.46
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.4
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.34
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	95.22
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	95.2
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.17
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.05
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	94.58
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.55
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	94.45
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	94.43
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	94.36
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	94.33
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	94.32
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	94.11
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	94.01
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	93.94
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	93.9
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	93.87
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	93.71
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	93.7
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	93.63
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	93.63
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	93.61
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	93.49
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	93.36
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	93.19
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	93.17
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	93.13
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	93.05
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	92.85
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	92.77
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	92.73
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	92.67
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	92.64
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	92.51
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	92.49
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	92.47
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	92.39
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	92.36
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	92.34
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	92.2
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	92.11
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	91.97
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	91.76
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	91.64
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	91.61
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	91.43
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	91.43
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	91.25
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	91.17
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	91.14
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	91.04
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	90.86
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	90.7
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	90.46
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	90.43
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	90.35
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	90.01
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	89.98
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	89.81
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	89.7
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	89.56
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	89.2
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	89.18
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	89.16
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	89.06
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	89.06
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	88.92
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	88.71
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	88.4
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	88.27
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	88.0
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	87.96
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	87.95
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	87.94
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	87.9
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	87.72
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	87.6
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	87.5
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	87.25
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	87.13
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	87.0
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	86.59
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	86.33
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	86.25
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	86.21
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	85.94
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	85.8
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	85.73
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	85.65
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	85.61
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	85.57
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	85.53
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	85.08
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	85.06
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	84.96
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	84.78
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	84.69
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	84.68
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	84.44
d2fpoa1	183	Methylase YhhF {Escherichia coli [TaxId: 562]}	84.27
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	83.99
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	83.85
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	83.7
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	82.59
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	82.55
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	82.39
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	82.0
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	81.83
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	81.79
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	81.71
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	81.25
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	81.18
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	81.14
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	80.76
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	80.7
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	80.36
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	80.28
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	80.11
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	80.06

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=8.9e-54  Score=375.62  Aligned_cols=243  Identities=26%  Similarity=0.311  Sum_probs=221.7

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      .++|+|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.  +.++.++++|+++++++++++++
T Consensus         4 ~d~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~--g~~~~~~~~Dvs~~~~~~~~~~~   81 (255)
T d1fmca_           4 SDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADF   81 (255)
T ss_dssp             GGGGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHHHH
Confidence            4578899999999999999999999999999999999999999999999999876  56899999999999999999999


Q ss_pred             HhhcCCCeeEEEEcccCCCC-CCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          102 YNSQGRPLNILINNAGIMAS-PFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      +.+++|+||+||||||+... +.+.+.++|++++++|+.++++++|.++|+|.+     +++++||++||.++..+.+  
T Consensus        82 ~~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~-----~~~g~Ii~isS~~~~~~~~--  154 (255)
T d1fmca_          82 AISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEK-----NGGGVILTITSMAAENKNI--  154 (255)
T ss_dssp             HHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-----HTCEEEEEECCGGGTCCCT--
T ss_pred             HHHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhcc-----ccccccccccccchhcccc--
Confidence            99999999999999998765 348899999999999999999999999999999     4478999999999998877  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc---chhHhHHHHHHHhhcC
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN---GILRGFCNTVGKLVLK  257 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~  257 (313)
                                   +..+|++||+|+++|+|++|.|++++|  ||||+|+||+++|++....   +..+.+.+..|.+++.
T Consensus       155 -------------~~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl~R~g  219 (255)
T d1fmca_         155 -------------NMTSYASSKAAASHLVRNMAFDLGEKN--IRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLG  219 (255)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCB
T ss_pred             -------------ccccchhHHHHHHHHHHHHHHHhCccC--eEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCCCCCc
Confidence                         788999999999999999999999999  9999999999999987643   3344555666778889


Q ss_pred             ChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          258 NIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       258 ~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      +|+|+|++++||++ +.++++||+.|.+||+.
T Consensus       220 ~pedvA~~v~fL~S-~~s~~itG~~i~vDGG~  250 (255)
T d1fmca_         220 QPQDIANAALFLCS-PAASWVSGQILTVSGGG  250 (255)
T ss_dssp             CHHHHHHHHHHHHS-GGGTTCCSCEEEESTTS
T ss_pred             CHHHHHHHHHHHhC-chhcCCcCCEEEECcCc
Confidence            99999999999998 89999999999988775

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2e-53  Score=372.62  Aligned_cols=243  Identities=26%  Similarity=0.303  Sum_probs=217.2

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      .-|+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++...  +.++.++++|++|+++++++++++
T Consensus         4 ~~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~--g~~~~~~~~Dvt~~~~v~~~~~~~   81 (251)
T d2c07a1           4 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGDVSKKEEISEVINKI   81 (251)
T ss_dssp             CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999999999999998765  557999999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          103 NSQGRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      .+++|+||+||||||......  +.+.++|++++++|+.++++++|+++|+|.+     +++|+||++||.++..+.+  
T Consensus        82 ~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~-----~~~G~IVnisS~~~~~~~~--  154 (251)
T d2c07a1          82 LTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMIN-----NRYGRIINISSIVGLTGNV--  154 (251)
T ss_dssp             HHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHH-----HTCEEEEEECCTHHHHCCT--
T ss_pred             HHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCccccc-----CCCeEEEEECCHHhcCCCC--
Confidence            999999999999999876532  7888999999999999999999999999998     4479999999999998877  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--chhHhHHHHHHHhhcCC
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--GILRGFCNTVGKLVLKN  258 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~  258 (313)
                                   ...+|++||+|+++|+|+||.|++++|  ||||+|+||+++|++....  +..+.+....|.+++.+
T Consensus       155 -------------~~~~Y~asKaal~~ltr~lA~el~~~g--IrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~  219 (251)
T d2c07a1         155 -------------GQANYSSSKAGVIGFTKSLAKELASRN--ITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGT  219 (251)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCC-----CCHHHHHHHHTTCTTSSCBC
T ss_pred             -------------CCHHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEccCCEecccccccCHHHHHHHHhcCCCCCCcC
Confidence                         778999999999999999999999999  9999999999999998764  23445555667788899


Q ss_pred             hHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          259 IPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       259 ~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      |+|+|++++||++ +.+.++||+.|.+||+..
T Consensus       220 pedvA~~v~fL~S-~~s~~itG~~i~vDGG~s  250 (251)
T d2c07a1         220 PEEVANLACFLSS-DKSGYINGRVFVIDGGLS  250 (251)
T ss_dssp             HHHHHHHHHHHHS-GGGTTCCSCEEEESTTSC
T ss_pred             HHHHHHHHHHHhC-chhCCCcCcEEEECCCcC
Confidence            9999999999998 889999999999888754

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=3.7e-53  Score=370.81  Aligned_cols=243  Identities=22%  Similarity=0.257  Sum_probs=218.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      |+|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+++ +.++.++++|++++++++++++++.+
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~   79 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDVSNYEEVKKLLEAVKE   79 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh-CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999999999999998887665 45789999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccc-cccCCC
Q 021391          105 QGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRF-AYSEGI  181 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~-~~~~~~  181 (313)
                      ++|+||+||||||+.... . +.+.++|++.+++|+.++++++|+++|+|++     ++.|+||+++|..+.. +.+   
T Consensus        80 ~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~-----~~~G~Ii~i~S~~~~~~~~~---  151 (251)
T d1vl8a_          80 KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRE-----SDNPSIINIGSLTVEEVTMP---  151 (251)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT-----CSSCEEEEECCGGGTCCCSS---
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccc-----cccccccccccchhccccCc---
Confidence            999999999999986543 3 7899999999999999999999999999988     5589999999976643 444   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----chhHhHHHHHHHhhcC
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----GILRGFCNTVGKLVLK  257 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~  257 (313)
                                  ...+|++||+|+++|+|+||.|++++|  ||||+|+||+++|++....    +....+.+..|.+++.
T Consensus       152 ------------~~~~Y~asKaal~~lt~~lA~e~~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~  217 (251)
T d1vl8a_         152 ------------NISAYAASKGGVASLTKALAKEWGRYG--IRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTG  217 (251)
T ss_dssp             ------------SCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCB
T ss_pred             ------------cccchHHHHHhHHHHHHHHHHHhcccC--eEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCCCC
Confidence                        577899999999999999999999999  9999999999999997643    2334555667778899


Q ss_pred             ChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          258 NIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       258 ~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      +|+|+|++++||++ +.++++||+.|.+||+...
T Consensus       218 ~pedvA~~v~fL~S-~~a~~itG~~i~vDGG~ta  250 (251)
T d1vl8a_         218 VPEDLKGVAVFLAS-EEAKYVTGQIIFVDGGWTA  250 (251)
T ss_dssp             CGGGGHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             CHHHHHHHHHHHhC-chhCCCcCcEEEeCcCeeC
Confidence            99999999999998 8899999999999987643

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.9e-53  Score=374.30  Aligned_cols=250  Identities=22%  Similarity=0.198  Sum_probs=200.7

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      .+|+|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++...  +.++.++.+|++++++++++++++
T Consensus         2 ~~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~   79 (259)
T d1xq1a_           2 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGSVCDASLRPEREKLMQTV   79 (259)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHHH
Confidence            468999999999999999999999999999999999999999999999998876  457999999999999999999999


Q ss_pred             hhcC-CCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccC
Q 021391          103 NSQG-RPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSE  179 (313)
Q Consensus       103 ~~~~-g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~  179 (313)
                      .+++ |++|+||||||+....  .+.+.++|++.+++|+.++++++|+++|+|++     ++.|+||++||.++..+.+ 
T Consensus        80 ~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~-----~~~G~Iv~isS~~~~~~~~-  153 (259)
T d1xq1a_          80 SSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKA-----SGCGNIIFMSSIAGVVSAS-  153 (259)
T ss_dssp             HHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HSSCEEEEEC----------
T ss_pred             HHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccc-----ccccccccccccccccccc-
Confidence            9997 6899999999987542  28899999999999999999999999999998     4479999999999988877 


Q ss_pred             CCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc---chhHhHHHHHHHhhc
Q 021391          180 GIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN---GILRGFCNTVGKLVL  256 (313)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~---~~~~~~~~~~~~~~~  256 (313)
                                    ...+|++||+|+++|+|++|.|++++|  ||||+|+||+++|++....   +..+.+....|.+++
T Consensus       154 --------------~~~~Y~asKaal~~lt~~lA~e~~~~g--IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~  217 (259)
T d1xq1a_         154 --------------VGSIYSATKGALNQLARNLACEWASDG--IRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRF  217 (259)
T ss_dssp             ---------------CCHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEECCSCC-------------------------
T ss_pred             --------------ccccccccccchhhhhHHHHHHhcccC--eEEEEeccCcccCHHhhhhchHHHHHHHHhCCCCCCC
Confidence                          678999999999999999999999999  9999999999999997753   233445667788889


Q ss_pred             CChHHHHHHHHHHHccCCccCCCceeecCCcccCCCccCCC
Q 021391          257 KNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQN  297 (313)
Q Consensus       257 ~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~~~~~  297 (313)
                      .+|+|+|++++||++ +.++++||+.|.+||+...+....+
T Consensus       218 ~~pedvA~~v~fL~S-~~s~~iTG~~i~vDGG~s~~g~~~~  257 (259)
T d1xq1a_         218 GEPEEVSSLVAFLCM-PAASYITGQTICVDGGLTVNGFSYQ  257 (259)
T ss_dssp             CCGGGGHHHHHHHTS-GGGTTCCSCEEECCCCEEETTEEEC
T ss_pred             cCHHHHHHHHHHHhC-chhcCCcCcEEEeCCCEECCCCCCC
Confidence            999999999999998 8999999999999999877665543

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=9.3e-53  Score=370.04  Aligned_cols=244  Identities=26%  Similarity=0.272  Sum_probs=220.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      +|+|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++...  +.++.++++|++|+++++++++++.
T Consensus         3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~   80 (259)
T d2ae2a_           3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVCDLSSRSERQELMNTVA   80 (259)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCCceEEEeeCCCHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999998876  5688999999999999999999999


Q ss_pred             hcCC-CeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          104 SQGR-PLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       104 ~~~g-~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      ++++ ++|++|||||+.....  +.+.++|++++++|+.++++++|.++|+|.+     +.+|+||+++|..+..+.|  
T Consensus        81 ~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~-----~~~G~Ii~isS~~~~~~~~--  153 (259)
T d2ae2a_          81 NHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKA-----SERGNVVFISSVSGALAVP--  153 (259)
T ss_dssp             HHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-----TSSEEEEEECCGGGTSCCT--
T ss_pred             HHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhh-----hcccccccccccccccccc--
Confidence            9886 7999999999876533  8899999999999999999999999999998     5589999999999988877  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-------chhHhHHHHHHH
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-------GILRGFCNTVGK  253 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-------~~~~~~~~~~~~  253 (313)
                                   ...+|+++|+|+++|+|++|.|++++|  ||||+|+||+|+|++.+..       +....+....|.
T Consensus       154 -------------~~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl  218 (259)
T d2ae2a_         154 -------------YEAVYGATKGAMDQLTRCLAFEWAKDN--IRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCAL  218 (259)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTT
T ss_pred             -------------cccchHHHHHHHHHHHHHHHHHhCcCc--eEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCC
Confidence                         778999999999999999999999999  9999999999999986542       122334455677


Q ss_pred             hhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCC
Q 021391          254 LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPN  292 (313)
Q Consensus       254 ~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~  292 (313)
                      +++.+|+|+|++++||++ +.++++||+.|.+||+...+
T Consensus       219 ~R~g~pedvA~~v~fL~S-~~s~~itG~~i~VDGG~~a~  256 (259)
T d2ae2a_         219 RRMGEPKELAAMVAFLCF-PAASYVTGQIIYVDGGLMAN  256 (259)
T ss_dssp             CSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGGC
T ss_pred             CCCcCHHHHHHHHHHHhC-chhCCCcCcEEEECCCeEee
Confidence            888999999999999998 88999999999999887654

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=4.5e-53  Score=371.74  Aligned_cols=242  Identities=21%  Similarity=0.240  Sum_probs=218.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      .|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++....++.++.++++|++|+++++++++++.++
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            47999999999999999999999999999999999999999999999988877778999999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCC--CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          106 GRPLNILINNAGIMAS--PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      +|+||+||||||+...  +. +.+.++|++.+++|+.++++++|++.|.|++     +..|+||++||.++..+.|    
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~-----~~~G~Ii~isS~~~~~~~~----  151 (258)
T d1iy8a_          81 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMRE-----QGSGMVVNTASVGGIRGIG----  151 (258)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-----HTCCEEEEECCGGGTSBCS----
T ss_pred             hCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhh-----hcCCCCcccccHhhccCCC----
Confidence            9999999999997643  34 7799999999999999999999999999998     4489999999999998877    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----------chhHhHHHHHH
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----------GILRGFCNTVG  252 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----------~~~~~~~~~~~  252 (313)
                                 ...+|++||+|+++|+|+||.|++++|  ||||+|+||+++|++....          ...+.+.+..|
T Consensus       152 -----------~~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p  218 (258)
T d1iy8a_         152 -----------NQSGYAAAKHGVVGLTRNSAVEYGRYG--IRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNP  218 (258)
T ss_dssp             -----------SBHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCT
T ss_pred             -----------CchHHHHHHHHHHHHHHHHHHHhCccC--ceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCC
Confidence                       788999999999999999999999999  9999999999999986532          12223344456


Q ss_pred             HhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          253 KLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       253 ~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      .+++.+|+|+|+.++||++ +.++++||+.|.+||+..
T Consensus       219 l~R~~~p~dvA~~v~fL~S-~~s~~itG~~i~VDGG~s  255 (258)
T d1iy8a_         219 SKRYGEAPEIAAVVAFLLS-DDASYVNATVVPIDGGQS  255 (258)
T ss_dssp             TCSCBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTTT
T ss_pred             CCCCcCHHHHHHHHHHHhC-chhcCCcCceEEcCcchh
Confidence            6788899999999999998 899999999999988764

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.5e-53  Score=368.59  Aligned_cols=237  Identities=26%  Similarity=0.335  Sum_probs=214.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++     +.+..++.+|++++++++++++++.++
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL-----GANGKGLMLNVTDPASIESVLEKIRAE   75 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCCCcEEEEEecCHHHhhhhhhhhhcc
Confidence            689999999999999999999999999999999999999998888776     346788999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          106 GRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      +|+||+||||||......  +.+.++|++.+++|+.++++++|+++|+|++     +++|+||++||.++..+.+     
T Consensus        76 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~-----~~~G~II~isS~~~~~~~~-----  145 (243)
T d1q7ba_          76 FGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMK-----KRHGRIITIGSVVGTMGNG-----  145 (243)
T ss_dssp             TCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-----HTCEEEEEECCHHHHHCCT-----
T ss_pred             cCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHH-----cCCCEeeeecchhhcCCCC-----
Confidence            999999999999876533  8899999999999999999999999999998     3479999999999998877     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--chhHhHHHHHHHhhcCChHH
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--GILRGFCNTVGKLVLKNIPQ  261 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~e  261 (313)
                                ...+|++||+|+++|+|++|.|++++|  ||||+|+||+++|++.+..  +....+.+..|.+++.+|+|
T Consensus       146 ----------~~~~Y~asKaal~~lt~~lA~ela~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~ped  213 (243)
T d1q7ba_         146 ----------GQANYAAAKAGLIGFSKSLAREVASRG--ITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQE  213 (243)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHTSCHHHHHHHHTTCTTSSCBCHHH
T ss_pred             ----------CCHHHHHHHHHHHHHHHHHHHHhCccC--eEEEEEecceEechhhhhhhhhHHHHHHhcCCCCCCCCHHH
Confidence                      778999999999999999999999999  9999999999999987754  22334455667778889999


Q ss_pred             HHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          262 GAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       262 va~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      +|+.++||++ +.++++||+.|.+||+..
T Consensus       214 vA~~v~fL~S-~~s~~itGq~i~vdGG~~  241 (243)
T d1q7ba_         214 IANAVAFLAS-DEAAYITGETLHVNGGMY  241 (243)
T ss_dssp             HHHHHHHHHS-GGGTTCCSCEEEESTTSS
T ss_pred             HHHHHHHHhC-chhcCCcCCeEEECCCeE
Confidence            9999999998 889999999999988754

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=5.4e-52  Score=364.60  Aligned_cols=240  Identities=23%  Similarity=0.306  Sum_probs=216.1

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      |.|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++     +.++.++++|++|+++++++++++.+
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~-----~~~~~~~~~Dvt~~~~v~~~~~~~~~   75 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI-----GPAACAIALDVTDQASIDRCVAELLD   75 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCceEEEEeeCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999999988888776     56789999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          105 QGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      ++|+||+||||||+.... . +.+.++|++.+++|+.++++++|+++|.|.++    +++|+||++||.++..+.+    
T Consensus        76 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~----~~~g~Iv~isS~~~~~~~~----  147 (256)
T d1k2wa_          76 RWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAG----GRGGKIINMASQAGRRGEA----  147 (256)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TSCEEEEEECCGGGTSCCT----
T ss_pred             HhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHh----ccCCccccccchhhccccc----
Confidence            999999999999987543 3 78999999999999999999999999987764    4579999999999998877    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-------------chhHhHHH
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-------------GILRGFCN  249 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-------------~~~~~~~~  249 (313)
                                 ...+|++||+|+++|+|++|.|++++|  ||||+|+||+++|++....             ...+.+..
T Consensus       148 -----------~~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (256)
T d1k2wa_         148 -----------LVGVYCATKAAVISLTQSAGLNLIRHG--INVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGA  214 (256)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHH
T ss_pred             -----------cccchhhhhhHHHHHHHHHHHHhcccC--eEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHh
Confidence                       788999999999999999999999999  9999999999999986532             12334556


Q ss_pred             HHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          250 TVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       250 ~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      .+|.+|+.+|+|+|+.++||++ +.++++||+.|.+||+...
T Consensus       215 ~~PlgR~~~p~evA~~v~fL~S-~~a~~iTG~~i~vDGG~~m  255 (256)
T d1k2wa_         215 AVPFGRMGRAEDLTGMAIFLAT-PEADYIVAQTYNVDGGNWM  255 (256)
T ss_dssp             HSTTSSCBCHHHHHHHHHHTTS-GGGTTCCSCEEEESTTSSC
T ss_pred             cCCCCCCcCHHHHHHHHHHHhC-chhCCccCceEEECcchhh
Confidence            6678889999999999999998 8999999999999987543

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=6.7e-52  Score=364.95  Aligned_cols=240  Identities=27%  Similarity=0.275  Sum_probs=210.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc-hhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM-AAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      |+||++|||||++|||+++|++|+++|++|++++|+. +.++++.+++.+.+ +.++.++++|++|+++++++++++.++
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH-GVKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH-TSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            6899999999999999999999999999999999974 56777777776654 568999999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          106 GRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      +|+||+||||||+.....  +.+.++|++.+++|+.++++++|+++|+|+++     +.|+||++||.++..+.|     
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-----~~G~Iv~isS~~~~~~~~-----  150 (260)
T d1x1ta1          81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ-----GFGRIINIASAHGLVASA-----  150 (260)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCT-----
T ss_pred             hCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhc-----CCceEeecccccceeccC-----
Confidence            999999999999876533  78999999999999999999999999999984     479999999999998877     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--------------chhHhHHH
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--------------GILRGFCN  249 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--------------~~~~~~~~  249 (313)
                                .+.+|++||+|+++|+|++|.|++++|  ||||+|+||+++|++....              ...+.+.+
T Consensus       151 ----------~~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (260)
T d1x1ta1         151 ----------NKSAYVAAKHGVVGFTKVTALETAGQG--ITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSE  218 (260)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCBCC------------------------CHHH
T ss_pred             ----------CcchhhhhhhhHHHhHHHHHHHhchhC--cEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHh
Confidence                      778999999999999999999999999  9999999999999987642              01122456


Q ss_pred             HHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          250 TVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       250 ~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      ..|.++..+|+|+|++++||++ +.++++||+.|.+||+..
T Consensus       219 ~~Pl~R~g~pediA~~v~fL~S-~~a~~itG~~i~vDGG~t  258 (260)
T d1x1ta1         219 KQPSLQFVTPEQLGGTAVFLAS-DAAAQITGTTVSVDGGWT  258 (260)
T ss_dssp             HCTTCCCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             cCCCCCCcCHHHHHHHHHHHhC-hhhCCCcCCEEEECcchh
Confidence            6777889999999999999998 899999999999998753

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=7.7e-52  Score=364.34  Aligned_cols=244  Identities=22%  Similarity=0.240  Sum_probs=215.2

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCch-hHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMA-AGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+.+ .++++.+++.+.  +.++.++++|++|+++++++++++.
T Consensus         3 ~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~   80 (261)
T d1geea_           3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV--GGEAIAVKGDVTVESDVINLVQSAI   80 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            3689999999999999999999999999999999999864 577777777765  5689999999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          104 SQGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      +++|+||+||||||+.... . +.+.++|++++++|+.++++++|+++|+|.++    +.++.||++||.++..+.|   
T Consensus        81 ~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~----~~g~~Iv~isS~~~~~~~~---  153 (261)
T d1geea_          81 KEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVEN----DIKGTVINMSSVHEKIPWP---  153 (261)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT----TCCCEEEEECCGGGTSCCT---
T ss_pred             HHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccc----cccccccccccchhcccCc---
Confidence            9999999999999987553 2 88999999999999999999999999999884    2345699999999988877   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----chhHhHHHHHHHhhcC
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----GILRGFCNTVGKLVLK  257 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~  257 (313)
                                  ...+|++||+|+++|+|+||.|++++|  ||||+|+||+++|++....    +....+.+..|..+..
T Consensus       154 ------------~~~~Y~asKaal~~lt~~lA~e~~~~g--IrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~  219 (261)
T d1geea_         154 ------------LFVHYAASKGGMKLMTETLALEYAPKG--IRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIG  219 (261)
T ss_dssp             ------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCB
T ss_pred             ------------cccccccCCccchhhHHHHHHHhhhhC--cEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCCC
Confidence                        778999999999999999999999999  9999999999999987643    2233344556777889


Q ss_pred             ChHHHHHHHHHHHccCCccCCCceeecCCcccCCC
Q 021391          258 NIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPN  292 (313)
Q Consensus       258 ~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~  292 (313)
                      +|+|+|++++||++ +.++++||+.|.+||+....
T Consensus       220 ~pediA~~v~fL~S-~~s~~itG~~i~vDGG~sl~  253 (261)
T d1geea_         220 EPEEIAAVAAWLAS-SEASYVTGITLFADGGMTLY  253 (261)
T ss_dssp             CHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGGC
T ss_pred             CHHHHHHHHHHHhC-chhcCCcCCeEEECCCeeCC
Confidence            99999999999998 89999999999988776543

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=3.2e-52  Score=365.07  Aligned_cols=240  Identities=24%  Similarity=0.240  Sum_probs=213.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      +|+||+||||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++++|++++++++++++++.++
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   76 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVTIEEDWQRVVAYAREE   76 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCceEEEEcccCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999999998888776665     457899999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          106 GRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      +|+||+||||||+.....  +.+.++|++.+++|+.++++++|+++|+|++     ++.|+||++||.++..+.+     
T Consensus        77 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~-----~~~G~II~isS~~~~~~~~-----  146 (254)
T d1hdca_          77 FGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKD-----AGGGSIVNISSAAGLMGLA-----  146 (254)
T ss_dssp             HSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-----HTCEEEEEECCGGGTSCCT-----
T ss_pred             cCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhh-----cCCCeecccccchhccccc-----
Confidence            999999999999876533  8899999999999999999999999999998     4479999999999988877     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--chhHhHHHHHHHhhcC-ChH
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--GILRGFCNTVGKLVLK-NIP  260 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~-~~~  260 (313)
                                ...+|++||+|+++|+|+||.|++++|  ||||+|+||+++|++....  ...+...+..+..+.. .|+
T Consensus       147 ----------~~~~Y~asKaal~~lt~~lA~e~a~~g--IrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~g~~Pe  214 (254)
T d1hdca_         147 ----------LTSSYGASKWGVRGLSKLAAVELGTDR--IRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPG  214 (254)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSSCB-CHH
T ss_pred             ----------chhhHHHHHHHHHHHHHHHHHHhCCCc--eEEEEeeeCcccCccchhcCHHHHHHHHhCCCCCCCCCCHH
Confidence                      778999999999999999999999999  9999999999999987643  1223333455666665 699


Q ss_pred             HHHHHHHHHHccCCccCCCceeecCCcccCCCc
Q 021391          261 QGAATTCYVALHPQVQGVSGEYFSDSNIYKPNS  293 (313)
Q Consensus       261 eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~  293 (313)
                      |+|++++||++ +.++++||+.|.+||+....+
T Consensus       215 dvA~~v~fL~S-~~a~~itG~~i~vDGG~t~gp  246 (254)
T d1hdca_         215 EIAGAVVKLLS-DTSSYVTGAELAVDGGWTTGP  246 (254)
T ss_dssp             HHHHHHHHHHS-GGGTTCCSCEEEESTTTTTSC
T ss_pred             HHHHHHHHHhc-hhhCCCCCceEEeCCCccCCC
Confidence            99999999998 899999999999998876544

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=7.2e-52  Score=360.75  Aligned_cols=234  Identities=22%  Similarity=0.235  Sum_probs=211.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+.++++++.+++     +.++.++++|++|+++++++++++.++
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   77 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL-----ADAARYVHLDVTQPAQWKAAVDTAVTA   77 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----hCcceEEEeecCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999998888877766     346889999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCC-CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          106 GRPLNILINNAGIMAS-PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~-~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      +|++|+||||||+... +. +.+.++|++.+++|+.++++++|.+.|.|.+     +++|+||++||.++..+.+     
T Consensus        78 ~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~-----~~~G~Ii~isS~~~~~~~~-----  147 (244)
T d1nffa_          78 FGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKE-----AGRGSIINISSIEGLAGTV-----  147 (244)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-----HTCEEEEEECCGGGTSCCT-----
T ss_pred             hCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHh-----cCcceEEeccccccccccc-----
Confidence            9999999999998754 23 8899999999999999999999999999998     4479999999999988877     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHHH
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGA  263 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~eva  263 (313)
                                ...+|+++|+|+++|+|++|.|++++|  ||||+|+||+++|++......   .....+..++.+|+|+|
T Consensus       148 ----------~~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~---~~~~~pl~R~~~p~diA  212 (244)
T d1nffa_         148 ----------ACHGYTATKFAVRGLTKSTALELGPSG--IRVNSIHPGLVKTPMTDWVPE---DIFQTALGRAAEPVEVS  212 (244)
T ss_dssp             ----------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCSGGGTTSCT---TCSCCSSSSCBCHHHHH
T ss_pred             ----------cccchhhHHHHHHHHHHHHHHHhcccC--EEEEEEeeCCccChhHhhhhH---HHHhccccCCCCHHHHH
Confidence                      788999999999999999999999999  999999999999998765421   12234667789999999


Q ss_pred             HHHHHHHccCCccCCCceeecCCcccC
Q 021391          264 ATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       264 ~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      ++++||++ +.++++||+.|.+||+..
T Consensus       213 ~~v~fL~s-~~s~~itG~~i~vDGG~~  238 (244)
T d1nffa_         213 NLVVYLAS-DESSYSTGAEFVVDGGTV  238 (244)
T ss_dssp             HHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHhC-hhhCCCcCCEEEECCCee
Confidence            99999998 889999999999887764

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=5.1e-51  Score=355.32  Aligned_cols=236  Identities=20%  Similarity=0.204  Sum_probs=208.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      |.|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++       +..++++|++|+++++++++++.+
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~-------~~~~~~~Dv~~~~~v~~~~~~~~~   73 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------GAHPVVMDVADPASVERGFAEALA   73 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-------TCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-------CCeEEEEecCCHHHHHHHHHHHHH
Confidence            6789999999999999999999999999999999999988877766533       467899999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          105 QGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      ++|+||+||||||+.... . +.+.++|++.+++|+.++++++|+++|.|.+     ++.+.|+++||. +..+.+    
T Consensus        74 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~-----~~~~~i~~~ss~-~~~~~~----  143 (242)
T d1ulsa_          74 HLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMRE-----KNPGSIVLTASR-VYLGNL----  143 (242)
T ss_dssp             HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----TCCEEEEEECCG-GGGCCT----
T ss_pred             hcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccc-----cccceeeeeccc-cccCCC----
Confidence            999999999999987653 3 8899999999999999999999999999988     446777777764 455555    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--chhHhHHHHHHHhhcCChH
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--GILRGFCNTVGKLVLKNIP  260 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~  260 (313)
                                 +..+|++||+|+++|+|+||.|++++|  ||||+|+||+++|++....  ...+......|.++..+|+
T Consensus       144 -----------~~~~Y~asKaal~~ltk~lA~ela~~g--IrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pe  210 (242)
T d1ulsa_         144 -----------GQANYAASMAGVVGLTRTLALELGRWG--IRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPL  210 (242)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTCSCBCHH
T ss_pred             -----------CCcchHHHHHHHHHHHHHHHHHHhhhC--cEEEEEeeCcccChhhhcCCHHHHHHHHhcCCCCCCCCHH
Confidence                       678999999999999999999999999  9999999999999998765  2344556667788889999


Q ss_pred             HHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          261 QGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       261 eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      |+|++++||++ +.++++||+.|.+||+...
T Consensus       211 dia~~v~fL~S-~~s~~itG~~i~vDGG~t~  240 (242)
T d1ulsa_         211 EVAYAALFLLS-DESSFITGQVLFVDGGRTI  240 (242)
T ss_dssp             HHHHHHHHHHS-GGGTTCCSCEEEESTTTTT
T ss_pred             HHHHHHHHHhc-hhhCCCCCcEEEECCCccC
Confidence            99999999998 8999999999999987654

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=2.7e-51  Score=360.90  Aligned_cols=238  Identities=22%  Similarity=0.219  Sum_probs=215.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+.+.++++.+++...  +.++.++.+|++|+++++++++++.++
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVCDVTSEEAVIGTVDSVVRD   79 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            479999999999999999999999999999999999999999999888765  568999999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCC--CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          106 GRPLNILINNAGIMAS--PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      +|++|+||||||+...  +. +.+.++|++.+++|+.++++++|++.|+|.+     ++.|+||++||.++..+.|    
T Consensus        80 ~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~-----~~~G~II~isS~~~~~~~~----  150 (260)
T d1zema1          80 FGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMIT-----QNYGRIVNTASMAGVKGPP----  150 (260)
T ss_dssp             HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-----HTCEEEEEECCHHHHSCCT----
T ss_pred             hCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhh-----hcCCCCCeeechhhccCCc----
Confidence            9999999999997643  33 7899999999999999999999999999998     4489999999999998877    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc------------------chh
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN------------------GIL  244 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~------------------~~~  244 (313)
                                 .+.+|++||+|+++|+|+||.|++++|  ||||+|+||+|+|++....                  ...
T Consensus       151 -----------~~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (260)
T d1zema1         151 -----------NMAAYGTSKGAIIALTETAALDLAPYN--IRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVA  217 (260)
T ss_dssp             -----------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHH
T ss_pred             -----------chHHHHHHHHHHHHHHHHHHHHhhhhC--CEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHH
Confidence                       788999999999999999999999999  9999999999999975321                  122


Q ss_pred             HhHHHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcc
Q 021391          245 RGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNI  288 (313)
Q Consensus       245 ~~~~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~  288 (313)
                      +.+...+|.+++.+|+|+|++++||++ +.++++||+.|.+||+
T Consensus       218 ~~~~~~~Pl~R~g~pedvA~~v~fL~S-~~s~~itG~~i~VDGG  260 (260)
T d1zema1         218 QQMIGSVPMRRYGDINEIPGVVAFLLG-DDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             HHHHHTSTTSSCBCGGGSHHHHHHHHS-GGGTTCCSCEEEESCC
T ss_pred             HHHHhcCCCCCCcCHHHHHHHHHHHhC-chhcCccCCeEEeCCC
Confidence            344556677888999999999999998 8999999999998874

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=4.6e-51  Score=356.77  Aligned_cols=238  Identities=25%  Similarity=0.297  Sum_probs=198.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      +|+||++|||||++|||+++|+.|+++|++|++++|+..+.  ..+.+...  +.++.++++|++|+++++++++++.++
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~--~~~~~~~~--g~~~~~~~~Dvs~~~~v~~~~~~~~~~   77 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPE--AEAAIRNL--GRRVLTVKCDVSQPGDVEAFGKQVIST   77 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHH--HHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHH--HHHHHHHc--CCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            47999999999999999999999999999999999987532  22233333  568999999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          106 GRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      +|+||+||||||+.... . +.+.++|++.+++|+.++++++|+++|+|.++     +.|+||++||.++..+.+     
T Consensus        78 ~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~G~Iv~isS~~~~~~~~-----  147 (247)
T d2ew8a1          78 FGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN-----GWGRIINLTSTTYWLKIE-----  147 (247)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGGSCCS-----
T ss_pred             cCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhc-----CCCCccccccchhcccCc-----
Confidence            99999999999987653 2 78999999999999999999999999999984     479999999999998877     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhH---HH-HHHHhhcCCh
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGF---CN-TVGKLVLKNI  259 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~---~~-~~~~~~~~~~  259 (313)
                                ...+|++||+|+++|+|+||.|++++|  ||||+|+||+++|++..........   .. ..+.+++.+|
T Consensus       148 ----------~~~~Y~asKaal~~ltk~lA~ela~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~p  215 (247)
T d2ew8a1         148 ----------AYTHYISTKAANIGFTRALASDLGKDG--ITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVP  215 (247)
T ss_dssp             ----------SCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCC------------------CTTSSSCSCCCT
T ss_pred             ----------ccccchhhhccHHHHHHHHHHHhcccC--eEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCH
Confidence                      778999999999999999999999999  9999999999999987654211111   11 1234567899


Q ss_pred             HHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          260 PQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       260 ~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      +|+|++++||++ +.++++||+.|.+||+..
T Consensus       216 edvA~~v~fL~S-~~s~~itG~~i~vDGG~~  245 (247)
T d2ew8a1         216 LDLTGAAAFLAS-DDASFITGQTLAVDGGMV  245 (247)
T ss_dssp             HHHHHHHHHHTS-GGGTTCCSCEEEESSSCC
T ss_pred             HHHHHHHHHHhC-chhcCCcCCeEEECCCEe
Confidence            999999999998 889999999999887753

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=3.5e-51  Score=359.26  Aligned_cols=238  Identities=25%  Similarity=0.287  Sum_probs=213.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      |++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.  +.++.++++|++|+++++++++++.+++|+|
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVSDRDQVFAAVEQARKTLGGF   79 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHHhCCc
Confidence            78899999999999999999999999999999999999999999876  5689999999999999999999999999999


Q ss_pred             eEEEEcccCCCC-CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCC
Q 021391          110 NILINNAGIMAS-PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIN  187 (313)
Q Consensus       110 d~lv~~ag~~~~-~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  187 (313)
                      |+||||||+... +. +.+.++|++.+++|+.++++++|+++|+|.+.    +.+++||++||.++..+.|         
T Consensus        80 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~----~~~g~Iv~isS~~~~~~~~---------  146 (255)
T d1gega_          80 DVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKE----GHGGKIINACSQAGHVGNP---------  146 (255)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TSCEEEEEECCGGGTSCCT---------
T ss_pred             cEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhh----ccccccccccchhhcccCc---------
Confidence            999999998755 33 88999999999999999999999999998874    4468899999999988877         


Q ss_pred             CCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-------------chhHhHHHHHHHh
Q 021391          188 DESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-------------GILRGFCNTVGKL  254 (313)
Q Consensus       188 ~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-------------~~~~~~~~~~~~~  254 (313)
                            ...+|++||+|+++|+|+||.|++++|  ||||+|+||+++|++....             .....+.+..|.+
T Consensus       147 ------~~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~  218 (255)
T d1gega_         147 ------ELAVYSSSKFAVRGLTQTAARDLAPLG--ITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLG  218 (255)
T ss_dssp             ------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTC
T ss_pred             ------ccccchhCHHHHHhhHHHHHHHhhhhC--cEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCC
Confidence                  788999999999999999999999999  9999999999999986542             1122344456677


Q ss_pred             hcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          255 VLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       255 ~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      |+.+|+|+|+.++||++ +.++++||+.|.+||+...
T Consensus       219 R~~~peevA~~v~fL~S-~~a~~itG~~i~vDGG~~~  254 (255)
T d1gega_         219 RLSEPEDVAACVSYLAS-PDSDYMTGQSLLIDGGMVF  254 (255)
T ss_dssp             SCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESSSSSC
T ss_pred             CCcCHHHHHHHHHHHhC-chhCCccCcEEEecCCEEe
Confidence            88999999999999998 8999999999999987653

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=1.7e-51  Score=360.33  Aligned_cols=240  Identities=25%  Similarity=0.254  Sum_probs=212.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      .|+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++..   +.++.++++|++|+++++++++++.++
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT---PDQIQFFQHDSSDEDGWTKLFDATEKA   79 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC---CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999888887743   457999999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          106 GRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      +|+||+||||||+.... . +.+.++|++.+++|+.++++++|+++|+|.++    +.+++||++||.++..+.|     
T Consensus        80 ~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~----~~gg~Ii~isS~~~~~~~~-----  150 (251)
T d1zk4a1          80 FGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNK----GLGASIINMSSIEGFVGDP-----  150 (251)
T ss_dssp             HSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS----SSCEEEEEECCGGGTSCCT-----
T ss_pred             hCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhc----CCCCceEeeeccceeccCC-----
Confidence            99999999999987653 2 88999999999999999999999999999883    2346999999999988877     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHH--hccCCCcEEEEEeeCcccccCCccccc---hhHhHHHHHHHhhcCC
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKH--LKEDGVNITANSLHPGSIVTNLFRYNG---ILRGFCNTVGKLVLKN  258 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e--~~~~g~~I~vn~i~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~  258 (313)
                                ...+|++||+|+++|+|++|.|  ++++|  ||||+|+||+++|++.....   .........|.+++.+
T Consensus       151 ----------~~~~Y~asKaal~~lt~~lA~e~~l~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~  218 (251)
T d1zk4a1         151 ----------SLGAYNASKGAVRIMSKSAALDCALKDYD--VRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGE  218 (251)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHHHTTCS--EEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBC
T ss_pred             ----------CchhHHHHHHHHhcchHHHHHHHhcCCCc--EEEEEEeCCCCCChhHHhcCCHHHHHHHHhCCCCCCCcC
Confidence                      7789999999999999999999  56788  99999999999999876542   1122233456778889


Q ss_pred             hHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          259 IPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       259 ~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      |+|+|+.++||++ +.++++||+.|.+||+..
T Consensus       219 pedvA~~v~fL~S-~~s~~itG~~i~vDGG~t  249 (251)
T d1zk4a1         219 PNDIAYICVYLAS-NESKFATGSEFVVDGGYT  249 (251)
T ss_dssp             HHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHHHhC-chhCCCcCcEEEECcccc
Confidence            9999999999998 889999999999988753

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=1.9e-51  Score=361.51  Aligned_cols=237  Identities=24%  Similarity=0.291  Sum_probs=212.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .||++|||||++|||+++|++|+++|++|++++|+.++++++.+++...  +.++.++++|++|+++++++++++.+++|
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~--g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g   78 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTCDVRSVPEIEALVAAVVERYG   78 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            3899999999999999999999999999999999999999999999775  56899999999999999999999999999


Q ss_pred             CeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHH--HHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          108 PLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDT--MKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       108 ~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~--l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      +||+||||||+.... . +.+.++|++.+++|+.++++++|+++|+  |.+     +..++||+++|.++..+.|     
T Consensus        79 ~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~-----~~~g~Ii~i~S~~~~~~~~-----  148 (257)
T d2rhca1          79 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLE-----RGTGRIVNIASTGGKQGVV-----  148 (257)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHH-----HTEEEEEEECCGGGTSCCT-----
T ss_pred             CCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHh-----cCCcccccccccccccccc-----
Confidence            999999999987553 2 8899999999999999999999999997  455     3368999999999998877     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-------------chhHhHHHH
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-------------GILRGFCNT  250 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-------------~~~~~~~~~  250 (313)
                                ...+|++||+|+++|+|+||.|++++|  ||||+|+||+++|++....             +....+.+.
T Consensus       149 ----------~~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~  216 (257)
T d2rhca1         149 ----------HAAPYSASKHGVVGFTKALGLELARTG--ITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITAR  216 (257)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHTTTSE--EEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTT
T ss_pred             ----------cchhHHHHHHHHHHHHHHHHHHhhhhC--cEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhc
Confidence                      788999999999999999999999999  9999999999999986532             122334455


Q ss_pred             HHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          251 VGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       251 ~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      +|.+|+.+|+|+|+.++||+| +.++++||+.|.+||+.
T Consensus       217 ~PlgR~~~pedia~~v~fL~S-~~s~~itG~~i~vDGG~  254 (257)
T d2rhca1         217 VPIGRYVQPSEVAEMVAYLIG-PGAAAVTAQALNVCGGL  254 (257)
T ss_dssp             STTSSCBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTC
T ss_pred             CCCCCCcCHHHHHHHHHHHhC-chhcCCcCceEEECcCc
Confidence            667788999999999999998 89999999999988764

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=4.2e-51  Score=356.28  Aligned_cols=236  Identities=24%  Similarity=0.282  Sum_probs=211.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEe-cCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAV-RNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      ++||||||++|||+++|++|+++|++|++++ |+.+.++++.+++...  +.++.++++|++|+++++++++++.+++|+
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY--GGQAITFGGDVSKEADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--TCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999975 5667788888888765  568999999999999999999999999999


Q ss_pred             eeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          109 LNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       109 id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                      +|+||||||..... . +.+.++|++++++|+.++++++|+++|+|.+     +++|+||++||.++..+.+        
T Consensus        80 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~-----~~~G~IVnisS~~~~~~~~--------  146 (244)
T d1edoa_          80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMK-----KRKGRIINIASVVGLIGNI--------  146 (244)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-----HTCEEEEEECCTHHHHCCT--------
T ss_pred             CCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHH-----cCCcEEEEEcChhhcCCCC--------
Confidence            99999999987653 3 8899999999999999999999999999998     4489999999999998877        


Q ss_pred             CCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--chhHhHHHHHHHhhcCChHHHHH
Q 021391          187 NDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--GILRGFCNTVGKLVLKNIPQGAA  264 (313)
Q Consensus       187 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~eva~  264 (313)
                             +..+|++||+|+++|+|+||.|++++|  ||||+|+||+++|++....  +..+.+....|.+++.+|+|+|+
T Consensus       147 -------~~~~Y~asKaal~~ltk~lA~el~~~g--IrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~  217 (244)
T d1edoa_         147 -------GQANYAAAKAGVIGFSKTAAREGASRN--INVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAG  217 (244)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHH
T ss_pred             -------CCHHHHHHHHHHHHChHHHHHHHhhhC--cEEEEEecceeccHHHHHhhHHHHHHHHhcCCCCCCcCHHHHHH
Confidence                   778999999999999999999999999  9999999999999987754  23344455567778899999999


Q ss_pred             HHHHHHccCCccCCCceeecCCccc
Q 021391          265 TTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       265 ~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      +++||+.+|.+.++||+.|.+||+.
T Consensus       218 ~v~fLa~S~~a~~itG~~i~vdGG~  242 (244)
T d1edoa_         218 LVEFLALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             HHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred             HHHHHHCCchhcCCcCCeEEeCCCe
Confidence            9999975599999999999988875

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=1.2e-50  Score=356.92  Aligned_cols=253  Identities=23%  Similarity=0.219  Sum_probs=218.3

Q ss_pred             hccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHH
Q 021391           21 VTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFAS  100 (313)
Q Consensus        21 ~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~  100 (313)
                      |.++|+++||+||||||++|||+++|++|+++|++|++++|+.+++++..+++.+++ +.++.++++|++++++++++++
T Consensus         1 p~~~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~   79 (260)
T d1h5qa_           1 PGFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVSNTDIVTKTIQ   79 (260)
T ss_dssp             CCEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH-TCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCcccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh-CCceEEEEccCCCHHHHHHHHH
Confidence            346789999999999999999999999999999999999999999999888887654 4578999999999999999999


Q ss_pred             HHhhcCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccccc
Q 021391          101 EYNSQGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYS  178 (313)
Q Consensus       101 ~~~~~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~  178 (313)
                      ++.+++|++|+||||||+.... . +.+.++|++.+++|+.++++++|.+.|+|.+.    ..+++|++++|........
T Consensus        80 ~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~----~~~g~i~~~~s~~~~~~~~  155 (260)
T d1h5qa_          80 QIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQK----QQKGSIVVTSSMSSQIINQ  155 (260)
T ss_dssp             HHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCCEEEEEECCGGGTSCCE
T ss_pred             HHHHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhccccccc----ccceEEEEeeccccccccc
Confidence            9999999999999999987553 2 78999999999999999999999999999764    4577888888876654322


Q ss_pred             CCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--chhHhHHHHHHHhhc
Q 021391          179 EGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--GILRGFCNTVGKLVL  256 (313)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--~~~~~~~~~~~~~~~  256 (313)
                      ..        ....++..+|+++|+|+++|+|++|.|++++|  ||||+|+||+++|++....  +..+...+.+|.+|+
T Consensus       156 ~~--------~~~~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~  225 (260)
T d1h5qa_         156 SS--------LNGSLTQVFYNSSKAACSNLVKGLAAEWASAG--IRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRF  225 (260)
T ss_dssp             EE--------TTEECSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSC
T ss_pred             cc--------cccCccccchhhhhhhHHHHHHHHHHHhchhC--eEEeecCCCcccCcchhccCHHHHHHHHhcCCCCCC
Confidence            10        00112567899999999999999999999999  9999999999999998765  234455666778889


Q ss_pred             CChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          257 KNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       257 ~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      .+|+|+|+.++||++ +.++++||+.|.+||+.
T Consensus       226 g~pedvA~~v~fL~S-~~s~~itG~~i~VDGG~  257 (260)
T d1h5qa_         226 AQPEEMTGQAILLLS-DHATYMTGGEYFIDGGQ  257 (260)
T ss_dssp             BCGGGGHHHHHHHHS-GGGTTCCSCEEEECTTG
T ss_pred             cCHHHHHHHHHHHhc-chhCCCcCceEEECCCe
Confidence            999999999999998 89999999999988765

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-51  Score=356.41  Aligned_cols=236  Identities=22%  Similarity=0.244  Sum_probs=207.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      ..|+||++|||||++|||+++|+.|+++|++|++++|+.+.++++.+++      .+..++.+|++|+++++++++++.+
T Consensus         2 ~rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~------~~~~~~~~Dvs~~~~v~~~~~~~~~   75 (250)
T d1ydea1           2 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL------PGAVFILCDVTQEDDVKTLVSETIR   75 (250)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------TTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc------CCCeEEEccCCCHHHHHHHHHHHHH
Confidence            3589999999999999999999999999999999999988877665542      3578999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCC--CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          105 QGRPLNILINNAGIMAS--PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      ++|+||+||||||+...  +. +.+.++|++.+++|+.++++++|+++|+|++.      +|+||++||.++..+.+   
T Consensus        76 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~------~G~Ii~isS~~~~~~~~---  146 (250)
T d1ydea1          76 RFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS------QGNVINISSLVGAIGQA---  146 (250)
T ss_dssp             HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCHHHHHCCT---
T ss_pred             hcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC------CCCCccccccccccccc---
Confidence            99999999999997643  23 78899999999999999999999999999873      58999999999988877   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--------chhHhHHHHHHH
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--------GILRGFCNTVGK  253 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--------~~~~~~~~~~~~  253 (313)
                                  ...+|+++|+|+++|+|+||.|++++|  ||||+|+||+|+|++.+..        ..........|.
T Consensus       147 ------------~~~~Y~asKaal~~lt~~lA~e~a~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl  212 (250)
T d1ydea1         147 ------------QAVPYVATKGAVTAMTKALALDESPYG--VRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPL  212 (250)
T ss_dssp             ------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTT
T ss_pred             ------------CcchhHHHHhhHHHHHHHHHHHhcccC--eEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCC
Confidence                        778999999999999999999999999  9999999999999986542        122333344567


Q ss_pred             hhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          254 LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       254 ~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      +|+.+|+|+|++++||++ + ++++||+.|.+||+...
T Consensus       213 ~R~g~p~eva~~v~fL~S-d-a~~itG~~i~vDGG~~l  248 (250)
T d1ydea1         213 GRMGQPAEVGAAAVFLAS-E-ANFCTGIELLVTGGAEL  248 (250)
T ss_dssp             SSCBCHHHHHHHHHHHHH-H-CTTCCSCEEEESTTTTS
T ss_pred             CCCCCHHHHHHHHHHHhC-c-cCCCcCCeEEECCCccc
Confidence            788999999999999997 6 78999999999887653

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=3e-51  Score=355.61  Aligned_cols=230  Identities=23%  Similarity=0.319  Sum_probs=202.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .++|+||++|||||++|||+++|++|+++|++|++++|+.+.             ..++..+++|++|+++++++++++.
T Consensus         2 ~psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~-------------~~~~~~~~~Dv~~~~~v~~~~~~~~   68 (237)
T d1uzma1           2 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA-------------PKGLFGVEVDVTDSDAVDRAFTAVE   68 (237)
T ss_dssp             CCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC-------------CTTSEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcch-------------hcCceEEEEecCCHHHHHHHHHHHH
Confidence            457999999999999999999999999999999999998654             3357789999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          104 SQGRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      +++|+||+||||||+.....  +.+.++|++++++|+.++++++|.++|+|.+     ++.|+||++||.++..+.+   
T Consensus        69 ~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~-----~~~g~Iv~isS~~~~~~~~---  140 (237)
T d1uzma1          69 EHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQR-----NKFGRMIFIGSVSGLWGIG---  140 (237)
T ss_dssp             HHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-----TTCEEEEEECCCCC--------
T ss_pred             HhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccc-----cCCCceEEEcchhhccCCc---
Confidence            99999999999999875532  7899999999999999999999999999999     5588999999999988877   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHHHHHHhhcCCh
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCNTVGKLVLKNI  259 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~  259 (313)
                                  +..+|++||+|+++|+|+||.|++++|  ||||+|+||+++|++.+...  ..+...+..|.+++.+|
T Consensus       141 ------------~~~~Y~asKaal~~lt~~lA~e~~~~g--IrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~p  206 (237)
T d1uzma1         141 ------------NQANYAASKAGVIGMARSIARELSKAN--VTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTP  206 (237)
T ss_dssp             ------------CCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTCSCBCH
T ss_pred             ------------ccHHHHHHHHHHHHHHHHHHhhhhcCC--ceeeeeeeCcCCChhhhccCHHHHHHHHhcCCCCCCcCH
Confidence                        788999999999999999999999999  99999999999999876542  23344455677788999


Q ss_pred             HHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          260 PQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       260 ~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      +|+|++++||++ ++++++||+.|.+||+.
T Consensus       207 edvA~~v~fL~S-~~s~~itG~~i~vdGG~  235 (237)
T d1uzma1         207 AEVAGVVSFLAS-EDASYISGAVIPVDGGM  235 (237)
T ss_dssp             HHHHHHHHHHHS-GGGTTCCSCEEEESTTT
T ss_pred             HHHHHHHHHHhC-chhcCCcCCeEEECCCC
Confidence            999999999998 89999999999988874

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=5.2e-51  Score=356.41  Aligned_cols=233  Identities=24%  Similarity=0.239  Sum_probs=205.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      |+||+||||||++|||+++|++|+++|++|++++|+.+..+ ..+++       ...++++|++|+++++++++++.+++
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~-------~~~~~~~Dv~~~~~v~~~~~~~~~~~   74 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAI-------GGAFFQVDLEDERERVRFVEEAAYAL   74 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHH-------TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHc-------CCeEEEEeCCCHHHHHHHHHHHHHhc
Confidence            79999999999999999999999999999999999976533 33332       34578999999999999999999999


Q ss_pred             CCeeEEEEcccCCCC-C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCC
Q 021391          107 RPLNILINNAGIMAS-P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFD  184 (313)
Q Consensus       107 g~id~lv~~ag~~~~-~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  184 (313)
                      |+||+||||||+... + .+.+.++|++.+++|+.++++++|+++|+|++     +++|+||+++|.++..+.+      
T Consensus        75 G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~-----~~~G~Ii~isS~~~~~~~~------  143 (248)
T d2d1ya1          75 GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRK-----VGGGAIVNVASVQGLFAEQ------  143 (248)
T ss_dssp             SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHT-----TTCEEEEEECCGGGTSBCT------
T ss_pred             CCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccc-----ccccccccccccccccccc------
Confidence            999999999998755 2 38899999999999999999999999999998     5589999999999998877      


Q ss_pred             CCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--------chhHhHHHHHHHhhc
Q 021391          185 KINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--------GILRGFCNTVGKLVL  256 (313)
Q Consensus       185 ~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--------~~~~~~~~~~~~~~~  256 (313)
                               ...+|+++|+|+++|+|++|.|++++|  ||||+|+||+++|++....        ...+.+.+..|.+++
T Consensus       144 ---------~~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~  212 (248)
T d2d1ya1         144 ---------ENAAYNASKGGLVNLTRSLALDLAPLR--IRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRL  212 (248)
T ss_dssp             ---------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSC
T ss_pred             ---------ccchhHHHHHHHHHHHHHHHHHhhhhC--cEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCC
Confidence                     788999999999999999999999999  9999999999999976532        223344555677788


Q ss_pred             CChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          257 KNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       257 ~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      .+|+|+|+.++||++ +.++++||+.|.+||+..
T Consensus       213 ~~pedia~~v~fL~S-~~s~~itG~~i~vDGG~t  245 (248)
T d2d1ya1         213 GKPEEVAEAVLFLAS-EKASFITGAILPVDGGMT  245 (248)
T ss_dssp             BCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             cCHHHHHHHHHHHhC-chhcCCCCcEEEcCcCcc
Confidence            999999999999998 899999999999888764

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=4e-50  Score=352.85  Aligned_cols=245  Identities=25%  Similarity=0.265  Sum_probs=216.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      +|+|+||+||||||++|||+++|++|+++|++|++++|+.++++++.+++...  +..++++.+|+++.++++++++++.
T Consensus         1 ~f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~   78 (258)
T d1ae1a_           1 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVCDLLSRTERDKLMQTVA   78 (258)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCCceEEEeecCCHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999888776  5678899999999999999999999


Q ss_pred             hcC-CCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          104 SQG-RPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       104 ~~~-g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      +++ +.+|+||||||......  +.+.++|++++++|+.+++++.+++.|.|.+     +..|+||++||.++..+.+  
T Consensus        79 ~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~-----~~~g~ii~isS~~~~~~~~--  151 (258)
T d1ae1a_          79 HVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKA-----SQNGNVIFLSSIAGFSALP--  151 (258)
T ss_dssp             HHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-----HTSEEEEEECCGGGTSCCT--
T ss_pred             HHhCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccc-----ccccccccccccccccccc--
Confidence            998 57999999999876532  7899999999999999999999999999998     4589999999999988877  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--------chhHhHHHHHH
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--------GILRGFCNTVG  252 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--------~~~~~~~~~~~  252 (313)
                                   ...+|+++|+|+++|+|.+|.|++++|  ||||+|+||+++|++....        +....+....|
T Consensus       152 -------------~~~~Y~~sK~al~~lt~~lA~el~~~g--IrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~p  216 (258)
T d1ae1a_         152 -------------SVSLYSASKGAINQMTKSLACEWAKDN--IRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTP  216 (258)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBC-------------CHHHHHHHHHHST
T ss_pred             -------------cchhHHHHHHHHHHHHHHHHHhcCcCc--EEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCC
Confidence                         788999999999999999999999999  9999999999999987643        23344555667


Q ss_pred             HhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCCc
Q 021391          253 KLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNS  293 (313)
Q Consensus       253 ~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~  293 (313)
                      .+++.+|+|+|++++||++ +.++++||+.|.+||+.....
T Consensus       217 lgR~~~pediA~~v~fL~S-~~s~~itG~~i~vDGG~s~~g  256 (258)
T d1ae1a_         217 MGRAGKPQEVSALIAFLCF-PAASYITGQIIWADGGFTANG  256 (258)
T ss_dssp             TCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGGCS
T ss_pred             CCCCcCHHHHHHHHHHHhC-hhhCCCcCcEEEeCCCeeccC
Confidence            7889999999999999998 899999999999998876543

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3e-50  Score=350.45  Aligned_cols=235  Identities=22%  Similarity=0.325  Sum_probs=206.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      |+|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++      ..+.++.+|++|+++++++++    
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~----   70 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC------PGIEPVCVDLGDWDATEKALG----   70 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHHT----
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc------CCCeEEEEeCCCHHHHHHHHH----
Confidence            6799999999999999999999999999999999999988877665543      357789999999999876654    


Q ss_pred             cCCCeeEEEEcccCCCC-CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          105 QGRPLNILINNAGIMAS-PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~-~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                      ++|+||+||||||+... +. +.+.++|++.+++|+.++++++|.+.|.|.+.    +.+|+||+++|.++..+.|    
T Consensus        71 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~----~~~g~ii~isS~~~~~~~~----  142 (242)
T d1cyda_          71 GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINR----GVPGSIVNVSSMVAHVTFP----  142 (242)
T ss_dssp             TCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCCEEEEEECCGGGTSCCT----
T ss_pred             HcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhh----cccCcccccchhhccccCC----
Confidence            57999999999998654 33 88999999999999999999999999987663    4578999999999988777    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----chhHhHHHHHHHhhcCC
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----GILRGFCNTVGKLVLKN  258 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~  258 (313)
                                 ...+|+++|+|+++|+|+||.|++++|  ||||+|+||+++|++....    ++...+.+..|.+++.+
T Consensus       143 -----------~~~~Y~asKaal~~lt~~lA~e~~~~g--IrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~  209 (242)
T d1cyda_         143 -----------NLITYSSTKGAMTMLTKAMAMELGPHK--IRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAE  209 (242)
T ss_dssp             -----------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBC
T ss_pred             -----------ccccccchHHHHHHHHHHHHHHhCccC--eecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCCCcC
Confidence                       788999999999999999999999999  9999999999999986643    34455667778888999


Q ss_pred             hHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          259 IPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       259 ~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      |+|+|++++||++ +.++++||+.|.+||+...
T Consensus       210 peeva~~v~fL~S-~~s~~itG~~i~vDGG~~a  241 (242)
T d1cyda_         210 VEDVVNSILFLLS-DRSASTSGGGILVDAGYLA  241 (242)
T ss_dssp             HHHHHHHHHHHHS-GGGTTCCSSEEEESTTGGG
T ss_pred             HHHHHHHHHHHhC-chhcCcCCceEEeCcchhc
Confidence            9999999999998 8999999999998887643

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.1e-50  Score=359.57  Aligned_cols=254  Identities=21%  Similarity=0.202  Sum_probs=218.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhC-CCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEI-PSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      .|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.. +..++.++.+|++++++++++++++.+
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            4799999999999999999999999999999999999999999999998764 245789999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCCC--C--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          105 QGRPLNILINNAGIMASP--F--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~--~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      ++|+||++|||||.....  .  +.+.++|++.+++|+.++++++|++.|+|.+     +++++|+++||.++..+.+  
T Consensus        81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~-----~~~g~ii~~ss~~~~~~~~--  153 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIK-----TKGEIVNVSSIVAGPQAHS--  153 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-----TTCEEEEECCGGGSSSCCT--
T ss_pred             HcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccc-----cccccccchhhhhccccCC--
Confidence            999999999999975432  1  4577899999999999999999999999998     5578888888888877766  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----hhH---hH----HH
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----ILR---GF----CN  249 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----~~~---~~----~~  249 (313)
                                   ++.+|+++|+|+++|+|++|.|++++|  ||||+|+||+|+|++.....    ...   .+    .+
T Consensus       154 -------------~~~~Y~asKaal~~ltk~lA~ela~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~  218 (274)
T d1xhla_         154 -------------GYPYYACAKAALDQYTRCTAIDLIQHG--VRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKE  218 (274)
T ss_dssp             -------------TSHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTT
T ss_pred             -------------CCceehhhhhHHHHHHHHHHHHHhHhC--CceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHc
Confidence                         678999999999999999999999999  99999999999999865431    011   11    12


Q ss_pred             HHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCCccCCCHHHH
Q 021391          250 TVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQNMELA  301 (313)
Q Consensus       250 ~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~~~~~~~~~  301 (313)
                      .+|.++..+|+|+|+.++||++.+.++|+||+.|.+||+..........+++
T Consensus       219 ~iPlgR~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~~l~~g~~~~~~~  270 (274)
T d1xhla_         219 CIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLM  270 (274)
T ss_dssp             TCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHH
T ss_pred             CCCCCCCcCHHHHHHHHHHHcCCccccCccCcEEEeCcCHHHhcCCCccchh
Confidence            3466788899999999999998446899999999999888776665554444

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.4e-50  Score=349.31  Aligned_cols=236  Identities=19%  Similarity=0.251  Sum_probs=206.4

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      +++.|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++      ..+..+.+|++|+++++++++  
T Consensus         1 M~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~--   72 (244)
T d1pr9a_           1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC------PGIEPVCVDLGDWEATERALG--   72 (244)
T ss_dssp             CCCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHHT--
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhc------CCCeEEEEeCCCHHHHHHHHH--
Confidence            457799999999999999999999999999999999999988877766543      257789999999999877664  


Q ss_pred             hhcCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          103 NSQGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                        ++|+||+||||||+.... . +.+.++|++.+++|+.++++++|.++|.|.+.    +.+|+||++||.++..+.|  
T Consensus        73 --~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~----~~~g~Ii~isS~~~~~~~~--  144 (244)
T d1pr9a_          73 --SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIAR----GVPGAIVNVSSQCSQRAVT--  144 (244)
T ss_dssp             --TCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCCEEEEEECCGGGTSCCT--
T ss_pred             --HhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHh----CCcceEeeccccccccccc--
Confidence              579999999999987653 3 88999999999999999999999999987653    4579999999999988877  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----chhHhHHHHHHHhhc
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----GILRGFCNTVGKLVL  256 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~~~~~  256 (313)
                                   ...+|++||+|+++|+|++|.|++++|  ||||+|+||+++|++....    .....+.+..|.+++
T Consensus       145 -------------~~~~Y~asKaal~~lt~~lA~el~~~g--IrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~  209 (244)
T d1pr9a_         145 -------------NHSVYCSTKGALDMLTKVMALELGPHK--IRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKF  209 (244)
T ss_dssp             -------------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCSC
T ss_pred             -------------chhhhhhhHHHHHHHHHHHHHHhCCCc--EEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCCC
Confidence                         788999999999999999999999999  9999999999999986643    233445556677888


Q ss_pred             CChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          257 KNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       257 ~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      .+|+|+|+.++||++ +.++++||+.|.+||++.
T Consensus       210 ~~peevA~~v~fL~S-~~a~~itG~~i~vDGG~~  242 (244)
T d1pr9a_         210 AEVEHVVNAILFLLS-DRSGMTTGSTLPVEGGFW  242 (244)
T ss_dssp             BCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             cCHHHHHHHHHHHhC-chhCCcCCcEEEECccHh
Confidence            999999999999998 899999999999988763

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=7.3e-51  Score=356.59  Aligned_cols=239  Identities=23%  Similarity=0.272  Sum_probs=208.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      .|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++     +.+..++++|++++++++++++++.++
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~~   77 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRHDVSSEADWTLVMAAVQRR   77 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCCeEEEEeecCCHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999999999988887776     557889999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          106 GRPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      +|++|+||||||+....  .+.+.++|++.+++|+.++++++|+++|+|++      ++|+||++||.++..+.+     
T Consensus        78 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~------~~G~Iv~isS~~~~~~~~-----  146 (253)
T d1hxha_          78 LGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKE------TGGSIINMASVSSWLPIE-----  146 (253)
T ss_dssp             HCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT------TCEEEEEECCGGGTSCCT-----
T ss_pred             hCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHh------cCCceecccchhhhcCcc-----
Confidence            99999999999987552  38899999999999999999999999999965      269999999999988877     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc---chhHhHH----HHHHHhhc
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN---GILRGFC----NTVGKLVL  256 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~---~~~~~~~----~~~~~~~~  256 (313)
                                ...+|++||+|+++|+|++|.|++++|.+||||+|+||+++|++.+..   ...+...    ...+.++.
T Consensus       147 ----------~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~  216 (253)
T d1hxha_         147 ----------QYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRA  216 (253)
T ss_dssp             ----------TBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCE
T ss_pred             ----------ccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCC
Confidence                      788999999999999999999999865559999999999999986532   1111111    12234467


Q ss_pred             CChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          257 KNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       257 ~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      .+|+|+|++++||++ +.++++||+.|.+||+...
T Consensus       217 ~~pedvA~~v~fL~S-~~s~~itG~~i~VDGG~~~  250 (253)
T d1hxha_         217 YMPERIAQLVLFLAS-DESSVMSGSELHADNSILG  250 (253)
T ss_dssp             ECHHHHHHHHHHHHS-GGGTTCCSCEEEESSSCTT
T ss_pred             CCHHHHHHHHHHHhC-hhhCCCcCcEEEECccHhh
Confidence            789999999999998 8999999999999887643

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=2.8e-50  Score=355.29  Aligned_cols=242  Identities=25%  Similarity=0.248  Sum_probs=205.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhC-CCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEI-PSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      .|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.. ++.++.++++|++++++++++++++.+
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4899999999999999999999999999999999999999999999998763 345799999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCCC------CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc-ccccc
Q 021391          105 QGRPLNILINNAGIMASP------FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA-HRFAY  177 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~-~~~~~  177 (313)
                      ++|+||+||||||+..+.      .+.+.++|++.+++|+.++++++|+++|+|++.      +|++|+++|.. +..+.
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~------~g~iI~~~S~~~~~~~~  155 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST------KGEIVNISSIASGLHAT  155 (264)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCTTSSSSCC
T ss_pred             HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccc------cCcceeeeeeccccccC
Confidence            999999999999976431      155789999999999999999999999999874      56777777765 46666


Q ss_pred             cCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc-----------hhHh
Q 021391          178 SEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG-----------ILRG  246 (313)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~-----------~~~~  246 (313)
                      |               ...+|++||+|+++|+|+||.|++++|  ||||+|+||+++|++.....           ....
T Consensus       156 ~---------------~~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  218 (264)
T d1spxa_         156 P---------------DFPYYSIAKAAIDQYTRNTAIDLIQHG--IRVNSISPGLVATGFGSAMGMPEETSKKFYSTMAT  218 (264)
T ss_dssp             T---------------TSHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCCCC--------------HHHHHH
T ss_pred             C---------------CchhhhhhhhhHHHHHHHHHHHhcccC--eEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHH
Confidence            6               678899999999999999999999999  99999999999999876431           1223


Q ss_pred             HHHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          247 FCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       247 ~~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      +.+.+|.+++.+|+|+|++++||++++.++|+||+.|.+||+..
T Consensus       219 ~~~~~Pl~R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~s  262 (264)
T d1spxa_         219 MKECVPAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSS  262 (264)
T ss_dssp             HHHHCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             HHhcCCCCCCcCHHHHHHHHHHHhCCcccCCccCceEEeCCChh
Confidence            34556778899999999999999985568999999999988764

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.5e-50  Score=357.80  Aligned_cols=262  Identities=19%  Similarity=0.251  Sum_probs=226.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCC---CCceEEEEccCCCHHHHHHHHHHH
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIP---SAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      .|+||+||||||++|||+++|++|+++|++|++++|+.+++++..+++....+   +.++.++++|++|+++++++++++
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            48999999999999999999999999999999999999999999999986542   557999999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          103 NSQGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      .+++|+||+||||||+.... . +.+.++|++.+++|+.++++++|+++|.|.++     ++++||++||. +..+.|  
T Consensus        89 ~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~-----~~g~Ii~~ss~-~~~~~~--  160 (297)
T d1yxma1          89 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKE-----HGGSIVNIIVP-TKAGFP--  160 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH-----HCEEEEEECCC-CTTCCT--
T ss_pred             HHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccc-----ccccccccccc-cccccc--
Confidence            99999999999999986543 2 88999999999999999999999999999984     47889988663 444444  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc------chhHhHHHHHHHh
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN------GILRGFCNTVGKL  254 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~------~~~~~~~~~~~~~  254 (313)
                                   ....|+++|+|+++|+|++|.|++++|  ||||+|+||+|+|++....      ++.+...+.+|.+
T Consensus       161 -------------~~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plg  225 (297)
T d1yxma1         161 -------------LAVHSGAARAGVYNLTKSLALEWACSG--IRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAK  225 (297)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTS
T ss_pred             -------------ccccchhHHHHHHHHHHHHHHHhcccC--ceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCC
Confidence                         678899999999999999999999999  9999999999999986532      2333444566778


Q ss_pred             hcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC-------------CccCCCHHHHHHHHHHHHhh
Q 021391          255 VLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP-------------NSQGQNMELAKKLWDFSMNL  311 (313)
Q Consensus       255 ~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~  311 (313)
                      ++.+|+|+|++++||++ +.++++||+.|.+||+...             .+...+.+..+++|+..++.
T Consensus       226 R~g~pedvA~~v~fL~S-d~s~~iTG~~i~VDGG~sl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (297)
T d1yxma1         226 RIGVPEEVSSVVCFLLS-PAASFITGQSVDVDGGRSLYTHSYEVPDHDNWPKGAGDLSVVKKMKETFKEK  294 (297)
T ss_dssp             SCBCTHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGGCBTTCCCCCCSCCCCCSSCCHHHHHHHHHHHHH
T ss_pred             CCcCHHHHHHHHHHHhC-chhcCcCCcEEEeCcChhhhcCCCCCCCcccccccCCchHHHHHHhHhhHHh
Confidence            88999999999999998 8999999999998876533             23344667778899887654

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=1.7e-49  Score=351.10  Aligned_cols=243  Identities=22%  Similarity=0.244  Sum_probs=209.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      .|+||+||||||++|||+++|++|+++|++|++++|+.++++++.+++..   ...+.++.+|++|+++++++++++.++
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS---PDVISFVHCDVTKDEDVRNLVDTTIAK   79 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC---CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999998888754   346788999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCCC----CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          106 GRPLNILINNAGIMASP----FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      +|++|++|||||+....    .+.+.++|++.+++|+.++++++|+++|+|.+     ++.|+||+++|..+..+.+.  
T Consensus        80 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~-----~~~g~ii~iss~~~~~~~~~--  152 (268)
T d2bgka1          80 HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIP-----AKKGSIVFTASISSFTAGEG--  152 (268)
T ss_dssp             HSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGG-----GTCEEEEEECCGGGTCCCTT--
T ss_pred             cCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhh-----cCCCCccccccccccccccc--
Confidence            99999999999976432    27788999999999999999999999999998     45799999999998776541  


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc-----hhHhHHHH--HHHh
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG-----ILRGFCNT--VGKL  254 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~-----~~~~~~~~--~~~~  254 (313)
                                  ....|++||+|+++|+|++|.|++++|  ||||+|+||+++|++.....     ........  .+..
T Consensus       153 ------------~~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~g  218 (268)
T d2bgka1         153 ------------VSHVYTATKHAVLGLTTSLCTELGEYG--IRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKG  218 (268)
T ss_dssp             ------------SCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCS
T ss_pred             ------------cccccchhHHHHHhCHHHHHHHhChhC--eEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCC
Confidence                        234799999999999999999999999  99999999999999976531     11111111  1335


Q ss_pred             hcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCCc
Q 021391          255 VLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNS  293 (313)
Q Consensus       255 ~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~  293 (313)
                      +..+|+|+|++++||++ +.+.++||+.|.+||+.....
T Consensus       219 r~~~pedvA~~v~fL~S-~~s~~itGq~i~VDGG~t~~~  256 (268)
T d2bgka1         219 TLLRAEDVADAVAYLAG-DESKYVSGLNLVIDGGYTRTN  256 (268)
T ss_dssp             CCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGGCC
T ss_pred             CCcCHHHHHHHHHHHhC-hhhCCccCceEEECcCcccCC
Confidence            67899999999999998 889999999999888765544

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=3.4e-50  Score=356.22  Aligned_cols=244  Identities=23%  Similarity=0.207  Sum_probs=208.5

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhC-CCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEI-PSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      .|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.. ++.++.++++|++++++++++++++.+
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   81 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999999987753 345799999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCCC-C-----ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECC-ccccccc
Q 021391          105 QGRPLNILINNAGIMASP-F-----MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSS-EAHRFAY  177 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~-~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS-~~~~~~~  177 (313)
                      ++|+||+||||||...+. .     +.+.+.|++++++|+.++++++|+++|+|.+.      ++++|+++| .++..+.
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~------~g~iI~~~Ss~a~~~~~  155 (272)
T d1xkqa_          82 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS------KGEIVNVSSIVAGPQAQ  155 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCGGGSSSCC
T ss_pred             HhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhccccccc------CCccccccchhccccCC
Confidence            999999999999986542 1     45666799999999999999999999999873      466776666 4667776


Q ss_pred             cCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccch----hH-------h
Q 021391          178 SEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGI----LR-------G  246 (313)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~----~~-------~  246 (313)
                      +               ...+|++||+|+++|+|+||.|++++|  ||||+|+||+|+|++......    ..       .
T Consensus       156 ~---------------~~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~  218 (272)
T d1xkqa_         156 P---------------DFLYYAIAKAALDQYTRSTAIDLAKFG--IRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMAS  218 (272)
T ss_dssp             C---------------SSHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHH
T ss_pred             C---------------CcchhhhHHHHHHHHHHHHHHHhcccC--eEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHH
Confidence            6               678999999999999999999999999  999999999999998764311    11       1


Q ss_pred             HHHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCC
Q 021391          247 FCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPN  292 (313)
Q Consensus       247 ~~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~  292 (313)
                      ..+.+|.+++.+|+|+|++++||++.+.+.|+||+.|.+||+....
T Consensus       219 ~~~~~PlgR~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~l~  264 (272)
T d1xkqa_         219 HKECIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSLV  264 (272)
T ss_dssp             CTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HhcCCCCCCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHHHh
Confidence            1123456778899999999999998334679999999998876654

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=1.3e-49  Score=353.14  Aligned_cols=252  Identities=17%  Similarity=0.163  Sum_probs=213.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      |+|+||+||||||++|||+++|++|+++|++|++++|+.++++++.+++     +.++.++.+|++++++++++++++.+
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~   75 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH-----GDNVLGIVGDVRSLEDQKQAASRCVA   75 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCCeeEEecccccHHHHHHHHHHHHH
Confidence            6789999999999999999999999999999999999998887776654     45799999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCCCC-------ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccc
Q 021391          105 QGRPLNILINNAGIMASPF-------MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAY  177 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~  177 (313)
                      ++|++|++|||||+.....       +.+.+.|++++++|+.++++++|+++|.|+++      +|+||+++|.++..+.
T Consensus        76 ~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~------~g~iI~i~S~~~~~~~  149 (276)
T d1bdba_          76 RFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVAS------RGNVIFTISNAGFYPN  149 (276)
T ss_dssp             HHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCGGGTSTT
T ss_pred             HhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhc------CCCceeeeechhccCC
Confidence            9999999999999764321       23334699999999999999999999999874      5899999999998877


Q ss_pred             cCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc------------chhH
Q 021391          178 SEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN------------GILR  245 (313)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~------------~~~~  245 (313)
                      +               ...+|++||+|+++|+|+||.|+++ +  ||||+|+||+|+|++....            +..+
T Consensus       150 ~---------------~~~~Y~asKaal~~ltr~lA~ela~-~--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~  211 (276)
T d1bdba_         150 G---------------GGPLYTAAKHAIVGLVRELAFELAP-Y--VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLAD  211 (276)
T ss_dssp             S---------------SCHHHHHHHHHHHHHHHHHHHHHTT-T--CEEEEEEECCCCSCCCCCGGGC---------CHHH
T ss_pred             C---------------CCchHHHHHHHHHHHHHHHHHHhhc-c--eEEcccCCCCEecCcCCccchhhhhhccCcHHHHH
Confidence            7               6789999999999999999999985 5  9999999999999986532            1223


Q ss_pred             hHHHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC---CccCCCHHHHHHHH
Q 021391          246 GFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP---NSQGQNMELAKKLW  305 (313)
Q Consensus       246 ~~~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~---~~~~~~~~~~~~~~  305 (313)
                      .+.+.+|.+|..+|+|+|++++||++.+.+.++||+.|.+||+...   ...+...++.+++|
T Consensus       212 ~~~~~~PlgR~g~peeva~~v~fL~S~~~a~~itG~~i~VDGG~~~~g~~~~~~~~~~~~~~~  274 (276)
T d1bdba_         212 MLKSVLPIGRMPEVEEYTGAYVFFATRGDAAPATGALLNYDGGLGVRGFFSGAGGNDLLEQLN  274 (276)
T ss_dssp             HHTTTCTTSSCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESSSGGGCCSSCSCSCTTHHHHHT
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHcCCcccCCeeCcEEEECcChhhcceeCCCCCcchHHHhc
Confidence            3344567778899999999999999855799999999999988764   33344445555554

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.9e-49  Score=344.41  Aligned_cols=235  Identities=25%  Similarity=0.280  Sum_probs=210.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      ++||+||||||++|||+++|++|+++|++|++++|+.+++++..+++.+..++.++.++++|++++++++++++++.+++
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            47999999999999999999999999999999999999999999998877767789999999999999999999999999


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                      |+||+||||||+.      ..++|++.+++|+.+++++++.++|+|.++.  ...+|+||++||.++..+.|        
T Consensus        81 G~iDilVnnAg~~------~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~--~~~~g~Iv~isS~~~~~~~~--------  144 (254)
T d2gdza1          81 GRLDILVNNAGVN------NEKNWEKTLQINLVSVISGTYLGLDYMSKQN--GGEGGIIINMSSLAGLMPVA--------  144 (254)
T ss_dssp             SCCCEEEECCCCC------CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGG--TCCCEEEEEECCGGGTSCCT--------
T ss_pred             CCcCeeccccccc------ccccchheeeeehhhHHHHHHHHHHHHHHhh--cCCCcEEEeeccHhhccCCC--------
Confidence            9999999999985      3467999999999999999999999998742  23468999999999998877        


Q ss_pred             CCCCCCCccccchHhHHHHHHHHHH--HHHHhccCCCcEEEEEeeCcccccCCcccc----------chhHhHHHHHHHh
Q 021391          187 NDESAYNSFGAYGQSKLANILHAKE--LAKHLKEDGVNITANSLHPGSIVTNLFRYN----------GILRGFCNTVGKL  254 (313)
Q Consensus       187 ~~~~~~~~~~~Y~asK~a~~~l~~~--la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----------~~~~~~~~~~~~~  254 (313)
                             ...+|++||+|+++|+|+  |+.|++++|  ||||+|+||+|+|++....          ++...+...++..
T Consensus       145 -------~~~~Y~asKaal~~ltrs~ala~e~~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  215 (254)
T d2gdza1         145 -------QQPVYCASKHGIVGFTRSAALAANLMNSG--VRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYY  215 (254)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHHHHTCC--EEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHH
T ss_pred             -------CccchHHHHHHHHHHHHHHHHHHHhcCCC--EEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCC
Confidence                   778999999999999997  688999999  9999999999999987643          2334456677888


Q ss_pred             hcCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          255 VLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       255 ~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      +..+|+|+|++++||++ +.  ++||+.|.+||+.
T Consensus       216 r~~~pedvA~~v~fL~s-~~--~itG~~i~VdGG~  247 (254)
T d2gdza1         216 GILDPPLIANGLITLIE-DD--ALNGAIMKITTSK  247 (254)
T ss_dssp             CCBCHHHHHHHHHHHHH-CT--TCSSCEEEEETTT
T ss_pred             CCcCHHHHHHHHHHHHc-CC--CCCCCEEEECCCC
Confidence            89999999999999998 43  4999999987764

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-48  Score=341.33  Aligned_cols=242  Identities=21%  Similarity=0.214  Sum_probs=211.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      |+||+||||||++|||+++|+.|+++|++|++++|+.++++++.+++.+.+++.++++++||++++++++++++++.+++
T Consensus         8 lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~   87 (257)
T d1xg5a_           8 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH   87 (257)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            89999999999999999999999999999999999999999999999988767789999999999999999999999999


Q ss_pred             CCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCC
Q 021391          107 RPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFD  184 (313)
Q Consensus       107 g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  184 (313)
                      |+||+||||||.....  .+.+.++|++.+++|+.+++++++.++|.|.++.   ..+|+||++||.++....|.     
T Consensus        88 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~---~~~g~Ii~isS~~~~~~~p~-----  159 (257)
T d1xg5a_          88 SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERN---VDDGHIININSMSGHRVLPL-----  159 (257)
T ss_dssp             CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT---CCSCEEEEECCGGGTSCCSC-----
T ss_pred             CCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhc---cCCCceEEEechHhcCCCCC-----
Confidence            9999999999987553  2889999999999999999999999999998842   34689999999998765441     


Q ss_pred             CCCCCCCCCccccchHhHHHHHHHHHHHHHHh--ccCCCcEEEEEeeCcccccCCcccc--chhHhHHHHHHHhhcCChH
Q 021391          185 KINDESAYNSFGAYGQSKLANILHAKELAKHL--KEDGVNITANSLHPGSIVTNLFRYN--GILRGFCNTVGKLVLKNIP  260 (313)
Q Consensus       185 ~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~--~~~g~~I~vn~i~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~  260 (313)
                              .....|+++|+|+.+|+|+|+.|+  +++|  ||||+|+||+++|++....  ...+......+..+..+|+
T Consensus       160 --------~~~~~Y~~sKaal~~ltr~la~el~~~~~~--I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~r~~~pe  229 (257)
T d1xg5a_         160 --------SVTHFYSATKYAVTALTEGLRQELREAQTH--IRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPE  229 (257)
T ss_dssp             --------GGGHHHHHHHHHHHHHHHHHHHHHHHTTCC--CEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC---CBCHH
T ss_pred             --------cccHHHHHHHHHHHhCHHHHHHHHHhCCCC--EEEEEEeCCCCCChhhhhcChhhHHHHHhcCCCCCCcCHH
Confidence                    156679999999999999999999  5666  9999999999999986643  2344566677888899999


Q ss_pred             HHHHHHHHHHccCCccCCCcee-ecCCc
Q 021391          261 QGAATTCYVALHPQVQGVSGEY-FSDSN  287 (313)
Q Consensus       261 eva~~~~~l~~~~~~~~~tG~~-~~~~~  287 (313)
                      |+|++++||++ +.++++||++ +.++|
T Consensus       230 dvA~~v~fL~s-~~a~~itG~i~i~~~g  256 (257)
T d1xg5a_         230 DVAEAVIYVLS-TPAHIQIGDIQMRPTG  256 (257)
T ss_dssp             HHHHHHHHHHH-SCTTEEEEEEEEEETT
T ss_pred             HHHHHHHHHhC-ChhcCeECCEEEEeCC
Confidence            99999999998 7899999995 55554

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=4.7e-49  Score=345.99  Aligned_cols=242  Identities=15%  Similarity=0.152  Sum_probs=205.9

Q ss_pred             ccCCCCCCCEEEEeCCCC--chHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASS--GIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFA   99 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~--giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~   99 (313)
                      ++.++|+||++|||||+|  |||+++|++|+++|++|++++|+++..++ .+++...  .....++++|++|++++++++
T Consensus         1 M~~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~-~~~~~~~--~~~~~~~~~D~~~~~~v~~~~   77 (256)
T d1ulua_           1 MLTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPE-AEKLAEA--LGGALLFRADVTQDEELDALF   77 (256)
T ss_dssp             CEEECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHHHH--TTCCEEEECCTTCHHHHHHHH
T ss_pred             CCCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHH-HHHhhhc--cCcccccccccCCHHHHHHHH
Confidence            356789999999999987  99999999999999999999998655444 4444444  346788999999999999999


Q ss_pred             HHHhhcCCCeeEEEEcccCCCC-----C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          100 SEYNSQGRPLNILINNAGIMAS-----P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       100 ~~~~~~~g~id~lv~~ag~~~~-----~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                      +++.+++|+||+||||||+...     . .+.+.++|+..+++|+.+++.++|++.|+|.+       +|+||++||..+
T Consensus        78 ~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~-------~G~Iv~isS~~~  150 (256)
T d1ulua_          78 AGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE-------GGGIVTLTYYAS  150 (256)
T ss_dssp             HHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-------EEEEEEEECGGG
T ss_pred             HHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc-------CCEEEEEeehHh
Confidence            9999999999999999998642     1 26778899999999999999999999999876       689999999999


Q ss_pred             cccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----chhHhHHH
Q 021391          174 RFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----GILRGFCN  249 (313)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----~~~~~~~~  249 (313)
                      ..+.|               ...+|+++|+|+++|+|++|.|++++|  ||||+|+||+++|++....    +..+.+.+
T Consensus       151 ~~~~~---------------~~~~Y~asKaal~~ltr~lA~ela~~g--IrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~  213 (256)
T d1ulua_         151 EKVVP---------------KYNVMAIAKAALEASVRYLAYELGPKG--VRVNAISAGPVRTVAARSIPGFTKMYDRVAQ  213 (256)
T ss_dssp             TSBCT---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCC----------CHHHHHHHHH
T ss_pred             cCCCC---------------CchHHHHHHHHHHHHHHHHHHHhcccC--CEEeeeccceeeeccccchhhhHHHHHHHHh
Confidence            88877               778999999999999999999999999  9999999999999987654    23445566


Q ss_pred             HHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          250 TVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       250 ~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      ..|.++..+|+|+|++++||++ +.++++||+.|.+||+...
T Consensus       214 ~~pl~R~~~pedvA~~v~fL~S-~~s~~itG~~i~VDGG~~~  254 (256)
T d1ulua_         214 TAPLRRNITQEEVGNLGLFLLS-PLASGITGEVVYVDAGYHI  254 (256)
T ss_dssp             HSTTSSCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             cCCCCCCcCHHHHHHHHHHHhC-chhCCccCCeEEECcCEeC
Confidence            7788889999999999999998 8999999999999988654

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=1.8e-48  Score=338.98  Aligned_cols=234  Identities=22%  Similarity=0.189  Sum_probs=204.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      .|+||+||||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++++|++++++++++++++.++
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~i~~~~~~i~~~   76 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVADVSDPKAVEAVFAEALEE   76 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-----CSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            479999999999999999999999999999999999998877655543     567899999999999999999999999


Q ss_pred             CCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          106 GRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      +|++|++|||||......  +.+.++|++++++|+.+++.++|.+.|+|.+       ++.|+++||.+.. +.|     
T Consensus        77 ~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~-------~~~i~~~ss~a~~-~~~-----  143 (241)
T d2a4ka1          77 FGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEE-------GGSLVLTGSVAGL-GAF-----  143 (241)
T ss_dssp             HSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCT-------TCEEEEECCCTTC-CHH-----
T ss_pred             hCCccEeccccccccccchhhhhcccccccccccccccccccccccccccc-------ccceeeccccccc-ccc-----
Confidence            999999999999875532  8899999999999999999999999999866       4566666665543 334     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--chhHhHHHHHHHhhcCChHH
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--GILRGFCNTVGKLVLKNIPQ  261 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~e  261 (313)
                                ++..|+++|+|+++|+|+||.|++++|  ||||+|+||+++|++....  +..+.+.+..|.+++.+|+|
T Consensus       144 ----------~~~~Y~~sK~al~~lt~~lA~el~~~g--IrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~d  211 (241)
T d2a4ka1         144 ----------GLAHYAAGKLGVVGLARTLALELARKG--VRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEE  211 (241)
T ss_dssp             ----------HHHHHHHCSSHHHHHHHHHHHHHTTTT--CEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTCSCBCHHH
T ss_pred             ----------CccccchhhHHHHHHHHHHHHHHhHhC--CEEeeeccCcCCCHHHHhhhHhHHHHHHhCCCCCCCcCHHH
Confidence                      678899999999999999999999999  9999999999999987754  34455666777888899999


Q ss_pred             HHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          262 GAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       262 va~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      +|++++||++ +.++++||+.|.+||+..
T Consensus       212 va~~v~fL~S-~~s~~itG~~i~vDGG~s  239 (241)
T d2a4ka1         212 VAQAALFLLS-EESAYITGQALYVDGGRS  239 (241)
T ss_dssp             HHHHHHHHHS-GGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHhc-chhCCCcCceEEeCCCcc
Confidence            9999999998 899999999999988764

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=1.1e-47  Score=343.78  Aligned_cols=274  Identities=19%  Similarity=0.176  Sum_probs=229.7

Q ss_pred             CCccchhccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHH
Q 021391           15 SSTAEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLAS   94 (313)
Q Consensus        15 ~~~~~~~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~   94 (313)
                      ++..+.++..++|+||+||||||++|||+++|++|+++|++|++++|+.+++++..+++..+. +.++.++.+|+++.++
T Consensus        11 ~~~~~~~~~~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~-g~~~~~~~~D~~~~~~   89 (294)
T d1w6ua_          11 SPLQKAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVRDPDM   89 (294)
T ss_dssp             CCCCSCCSCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHH
T ss_pred             CcccccCCCCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhc-CCceEEEEecccChHH
Confidence            344556667789999999999999999999999999999999999999999999999888765 5678999999999999


Q ss_pred             HHHHHHHHhhcCCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391           95 VRKFASEYNSQGRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus        95 v~~~~~~~~~~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                      ++++++.+.++++++|++|||||......  ..+.++++..+.+|+.+.+.+.+...+.+...    ...+.+++++|.+
T Consensus        90 v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~~~~~i~~~ss~~  165 (294)
T d1w6ua_          90 VQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKA----QKGAAFLSITTIY  165 (294)
T ss_dssp             HHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----TCCEEEEEECCTH
T ss_pred             HHHHhhhhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccc----cccccccccccch
Confidence            99999999999999999999999876532  77888999999999999999999988887763    4567888899988


Q ss_pred             ccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-----chhHhH
Q 021391          173 HRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-----GILRGF  247 (313)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-----~~~~~~  247 (313)
                      +..+.+               ...+|+++|+|+++|+|++|.|++++|  ||||+|+||+|+|++....     ......
T Consensus       166 ~~~~~~---------------~~~~YsasKaal~~ltk~lA~ela~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~  228 (294)
T d1w6ua_         166 AETGSG---------------FVVPSASAKAGVEAMSKSLAAEWGKYG--MRFNVIQPGPIKTKGAFSRLDPTGTFEKEM  228 (294)
T ss_dssp             HHHCCT---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCC------CCTTSHHHHHH
T ss_pred             hhhccc---------------ccchHHHHHHHHHHHHHHHHHHHhHhC--eEEEEEccCccccchhhhccCCcHHHHHHH
Confidence            887766               678899999999999999999999999  9999999999999986543     234455


Q ss_pred             HHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCCccCC--CH-HHHHHHHHHHHhh
Q 021391          248 CNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQ--NM-ELAKKLWDFSMNL  311 (313)
Q Consensus       248 ~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~  311 (313)
                      .+..|.++..+|+|+|+.++||++ +.+.++||+.|.+||+........  +. +..++.|+.+|++
T Consensus       229 ~~~~pl~R~~~pediA~~v~fL~s-d~s~~itG~~i~vDGG~~l~~~~~~~~~~~~~~~~~~~~~~~  294 (294)
T d1w6ua_         229 IGRIPCGRLGTVEELANLAAFLCS-DYASWINGAVIKFDGGEEVLISGEFNDLRKVTKEQWDTIEEL  294 (294)
T ss_dssp             HTTCTTSSCBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCHHHHHHHTTC
T ss_pred             hhcCCCCCCCCHHHHHHHHHHHhC-chhcCCCCcEEEECCChhheeCCCCCchhhcchhhhhhHhhC
Confidence            566778889999999999999998 889999999999887754333322  22 2246788887764

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=5.7e-48  Score=339.59  Aligned_cols=237  Identities=22%  Similarity=0.257  Sum_probs=206.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEec-CchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVR-NMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      .|+||+||||||++|||+++|++|+++|++|+++++ +.+..+++.+++.+.  +.+++++.+|++|+++++++++++.+
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~~~v~~~~~~~~~   80 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL--GAQGVAIQADISKPSEVVALFDKAVS   80 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHc--CCCceEecCCCCCHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999765 555577777777765  56899999999999999999999999


Q ss_pred             cCCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccc-cccCCC
Q 021391          105 QGRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRF-AYSEGI  181 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~-~~~~~~  181 (313)
                      ++|+||++|||||......  +.+.+.|++.+++|+.++++++|.++|+|++       ++++++++|..+.. +.+   
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~-------~g~~iii~s~~~~~~~~~---  150 (259)
T d1ja9a_          81 HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR-------GGRIILTSSIAAVMTGIP---  150 (259)
T ss_dssp             HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE-------EEEEEEECCGGGTCCSCC---
T ss_pred             HcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhc-------CCcccccccccccccCCC---
Confidence            9999999999999875533  7899999999999999999999999999976       57888888876644 444   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc---------------chhHh
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN---------------GILRG  246 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~---------------~~~~~  246 (313)
                                  .+..|+++|+|+++|+|+||.|++++|  ||||+|+||+++|++.+..               .+.+.
T Consensus       151 ------------~~~~Y~asK~al~~l~r~lA~e~~~~g--IrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (259)
T d1ja9a_         151 ------------NHALYAGSKAAVEGFCRAFAVDCGAKG--VTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEG  216 (259)
T ss_dssp             ------------SCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHH
T ss_pred             ------------CchhHHHHHHHHHHHHHHHHHHHhhcC--eEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHH
Confidence                        678999999999999999999999999  9999999999999875421               12334


Q ss_pred             HHHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          247 FCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       247 ~~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      +.+..|.+++.+|+|+|++++||++ +.++++||+.|.+||+.
T Consensus       217 ~~~~~pl~R~g~p~eVa~~v~fL~S-~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         217 LANMNPLKRIGYPADIGRAVSALCQ-EESEWINGQVIKLTGGG  258 (259)
T ss_dssp             HHHTSTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTC
T ss_pred             HHhCCCCCCCcCHHHHHHHHHHHhC-chhcCCcCceEEeCCCC
Confidence            4556677889999999999999998 88999999999988764

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=3.2e-48  Score=339.80  Aligned_cols=230  Identities=16%  Similarity=0.157  Sum_probs=202.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCee
Q 021391           31 TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLN  110 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~id  110 (313)
                      |+|||||++|||+++|++|+++|++|++++|+.+..+++... ...       +.++|+++.++++++++++.+++|+||
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~-~~~-------~~~~dv~~~~~~~~~~~~~~~~~G~iD   73 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAF-AET-------YPQLKPMSEQEPAELIEAVTSAYGQVD   73 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHH-HHH-------CTTSEECCCCSHHHHHHHHHHHHSCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhh-hCc-------EEEeccCCHHHHHHHHHHHHHHcCCCC
Confidence            899999999999999999999999999999998887765433 222       346899999999999999999999999


Q ss_pred             EEEEcccCCCC--CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCC
Q 021391          111 ILINNAGIMAS--PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIN  187 (313)
Q Consensus       111 ~lv~~ag~~~~--~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  187 (313)
                      +||||||+...  +. +.+.++|++.+++|+.++++++|+++|+|++     ++.|+||++||.++..+.+         
T Consensus        74 iLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~-----~~~G~IV~isS~~~~~~~~---------  139 (252)
T d1zmta1          74 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKK-----RKSGHIIFITSATPFGPWK---------  139 (252)
T ss_dssp             EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-----HTCCEEEEECCSTTTSCCT---------
T ss_pred             EEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcc-----cccceeecccccccccccc---------
Confidence            99999997643  33 7889999999999999999999999999998     4479999999999988777         


Q ss_pred             CCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----------chhHhHHHHHHHhhcC
Q 021391          188 DESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----------GILRGFCNTVGKLVLK  257 (313)
Q Consensus       188 ~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----------~~~~~~~~~~~~~~~~  257 (313)
                            ...+|++||+|+++|+|+||.|++++|  ||||+|+||+++|++....          +....+.+..|.+|+.
T Consensus       140 ------~~~~Y~asKaal~~lt~~lA~ela~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g  211 (252)
T d1zmta1         140 ------ELSTYTSARAGACTLANALSKELGEYN--IPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLG  211 (252)
T ss_dssp             ------TCHHHHHHHHHHHHHHHHHHHHHGGGT--CCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCB
T ss_pred             ------cccccccccccHHHHHHHHHHHhcccC--cEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCc
Confidence                  678999999999999999999999999  9999999999999986542          1233445566777889


Q ss_pred             ChHHHHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          258 NIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       258 ~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      +|+|+|++++||++ +.++|+||+.|.+||+...
T Consensus       212 ~pedvA~~v~fL~S-~~s~~iTG~~i~vdGG~~~  244 (252)
T d1zmta1         212 TQKELGELVAFLAS-GSCDYLTGQVFWLAGGFPM  244 (252)
T ss_dssp             CHHHHHHHHHHHHT-TSCGGGTTCEEEESTTCCC
T ss_pred             CHHHHHHHHHHHhC-chhcCCcCCeEEECCCcee
Confidence            99999999999998 8999999999999888654

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=4.8e-47  Score=329.69  Aligned_cols=225  Identities=22%  Similarity=0.283  Sum_probs=200.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCE-------EEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVH-------VIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~-------V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      ++||||||++|||+++|++|+++|++       |++++|+.++++++.+++...  +.++.++.+|++|+++++++++++
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dvt~~~~v~~~~~~~   79 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDTITADISDMADVRRLTTHI   79 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT--TCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHH
Confidence            56899999999999999999999997       999999999999999998776  568999999999999999999999


Q ss_pred             hhcCCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          103 NSQGRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      .+++|++|+||||||+.....  +.+.++|++++++|+.|+++++|+++|+|++     +++|+||++||.++..+.|  
T Consensus        80 ~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~-----~~~G~Ii~isS~~~~~~~~--  152 (240)
T d2bd0a1          80 VERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMER-----QHSGHIFFITSVAATKAFR--  152 (240)
T ss_dssp             HHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-----HTCEEEEEECCGGGTSCCT--
T ss_pred             HHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHh-----cCCCceEEEechhhcCCCC--
Confidence            999999999999999876533  7899999999999999999999999999998     4479999999999998877  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChH
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIP  260 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  260 (313)
                                   ++.+|++||+|+++|+|+|+.|++++|  ||||+|+||+++|++.......       ...+..+|+
T Consensus       153 -------------~~~~Y~asK~al~~lt~~la~el~~~g--Irvn~i~PG~v~T~~~~~~~~~-------~~~~~~~Pe  210 (240)
T d2bd0a1         153 -------------HSSIYCMSKFGQRGLVETMRLYARKCN--VRITDVQPGAVYTPMWGKVDDE-------MQALMMMPE  210 (240)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCBCSTTTCCCCST-------TGGGSBCHH
T ss_pred             -------------CChHHHHHHHHHHHHHHHHHHHhCcCC--eEEEEeeeCcccCchhhhcCHh-------hHhcCCCHH
Confidence                         788999999999999999999999999  9999999999999998765211       123467899


Q ss_pred             HHHHHHHHHHccCCccCCCcee-ecCC
Q 021391          261 QGAATTCYVALHPQVQGVSGEY-FSDS  286 (313)
Q Consensus       261 eva~~~~~l~~~~~~~~~tG~~-~~~~  286 (313)
                      |+|+.++||++ +.+.+++|+. +.+.
T Consensus       211 dvA~~v~~l~s-~~~~~~~~~~~i~p~  236 (240)
T d2bd0a1         211 DIAAPVVQAYL-QPSRTVVEEIILRPT  236 (240)
T ss_dssp             HHHHHHHHHHT-SCTTEEEEEEEEEET
T ss_pred             HHHHHHHHHHc-CCccCccCCEEEEec
Confidence            99999999998 5567777764 4343

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=3.3e-47  Score=329.74  Aligned_cols=225  Identities=19%  Similarity=0.172  Sum_probs=194.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      |+||++|||||++|||+++|++|+++|++|++++|+.+.+++           ....++.+|+++.      ++.+.+++
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~-----------~~~~~~~~Dv~~~------~~~~~~~~   64 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR-----------SGHRYVVCDLRKD------LDLLFEKV   64 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-----------TCSEEEECCTTTC------HHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh-----------cCCcEEEcchHHH------HHHHHHHh
Confidence            689999999999999999999999999999999999755432           1345788999874      34455677


Q ss_pred             CCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCC
Q 021391          107 RPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFD  184 (313)
Q Consensus       107 g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  184 (313)
                      |+||+||||||+.... . +.+.++|++.+++|+.++++++|+++|+|++     ++.|+||+++|..+..+.+      
T Consensus        65 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~-----~~~G~ii~i~S~~~~~~~~------  133 (234)
T d1o5ia_          65 KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKE-----KGWGRIVAITSFSVISPIE------  133 (234)
T ss_dssp             CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-----HTCEEEEEECCGGGTSCCT------
T ss_pred             CCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccc-----ccccccccccccccccccc------
Confidence            9999999999976543 2 7899999999999999999999999999998     4479999999999887766      


Q ss_pred             CCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc---chhHhHHHHHHHhhcCChHH
Q 021391          185 KINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN---GILRGFCNTVGKLVLKNIPQ  261 (313)
Q Consensus       185 ~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~e  261 (313)
                               ....|+++|+|+++|+|++|.|++++|  ||||+|+||+++|++....   ...+.+.+..|.++..+|+|
T Consensus       134 ---------~~~~Y~asKaal~~ltk~lA~ela~~g--IrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl~R~~~ped  202 (234)
T d1o5ia_         134 ---------NLYTSNSARMALTGFLKTLSFEVAPYG--ITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEE  202 (234)
T ss_dssp             ---------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHH
T ss_pred             ---------ccccchhHHHHHHHHHHHHHHHhcccC--eEEeecccCccchhhhhhhcCHHHHHHHHhcCCCCCCcCHHH
Confidence                     778999999999999999999999999  9999999999999987643   23344555677888999999


Q ss_pred             HHHHHHHHHccCCccCCCceeecCCcccCC
Q 021391          262 GAATTCYVALHPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       262 va~~~~~l~~~~~~~~~tG~~~~~~~~~~~  291 (313)
                      +|+.++||++ +.++++||+.|.+||+...
T Consensus       203 iA~~v~fL~S-~~s~~itG~~i~vDGG~s~  231 (234)
T d1o5ia_         203 IASVVAFLCS-EKASYLTGQTIVVDGGLSK  231 (234)
T ss_dssp             HHHHHHHHHS-GGGTTCCSCEEEESTTCCC
T ss_pred             HHHHHHHHhC-hhhcCCcCcEEEECccccc
Confidence            9999999998 8999999999998877543

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=8.5e-47  Score=334.38  Aligned_cols=241  Identities=22%  Similarity=0.252  Sum_probs=207.7

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc-hhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM-AAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      ...+|+||++|||||++|||+++|++|+++|++|++++|+. +.++++.+++.+.  +.++.++++|++|++++++++++
T Consensus        12 ~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~~~v~~~~~~   89 (272)
T d1g0oa_          12 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN--GSDAACVKANVGVVEDIVRMFEE   89 (272)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhh--CCceeeEeCCCCCHHHHHHHHHH
Confidence            45569999999999999999999999999999999999875 5567777777665  56899999999999999999999


Q ss_pred             HhhcCCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccC
Q 021391          102 YNSQGRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSE  179 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~  179 (313)
                      +.+++|++|++|||+|......  +.+.++|++.+++|+.++++++|++.|+|.+       ++++++++|..+..... 
T Consensus        90 ~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~-------~g~~i~i~s~~~~~~~~-  161 (272)
T d1g0oa_          90 AVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI-------GGRLILMGSITGQAKAV-  161 (272)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT-------TCEEEEECCGGGTCSSC-
T ss_pred             HHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccc-------ccccccccccccccccc-
Confidence            9999999999999999876533  7899999999999999999999999999976       68999999887654322 


Q ss_pred             CCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc-----------h----h
Q 021391          180 GIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG-----------I----L  244 (313)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~-----------~----~  244 (313)
                                   +....|+++|+|+++|+|++|.|++++|  ||||+|+||+++|++.....           .    .
T Consensus       162 -------------~~~~~Y~asKaal~~ltk~lA~e~~~~g--IrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  226 (272)
T d1g0oa_         162 -------------PKHAVYSGSKGAIETFARCMAIDMADKK--ITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDE  226 (272)
T ss_dssp             -------------SSCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHH
T ss_pred             -------------cchhhHHHHHHHHHHHHHHHHHHhchhC--eEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHH
Confidence                         1667899999999999999999999999  99999999999998754310           0    0


Q ss_pred             HhHHHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          245 RGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       245 ~~~~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      .......|.+++.+|+|+|++++||++ +.++++||+.|.+||+.
T Consensus       227 ~~~~~~~PlgR~~~peevA~~v~fL~s-~~s~~itG~~i~vDGG~  270 (272)
T d1g0oa_         227 YAAVQWSPLRRVGLPIDIARVVCFLAS-NDGGWVTGKVIGIDGGA  270 (272)
T ss_dssp             HHHHHSCTTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTC
T ss_pred             HHHHccCCCCCCcCHHHHHHHHHHHhC-chhcCccCceEeECCCC
Confidence            122344567788999999999999998 88999999999988875

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.1e-46  Score=335.88  Aligned_cols=251  Identities=20%  Similarity=0.223  Sum_probs=210.2

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecC---------chhHHHHHHHHHHhCCCCceEEEEccCCCHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRN---------MAAGKDVREAIVKEIPSAKVDAMELDVSSLA   93 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~---------~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~   93 (313)
                      +.|+|+||++|||||++|||+++|++|+++|++|++++|+         .+.+++..+++...     .....+|+++.+
T Consensus         1 sPm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~d~~~~~   75 (302)
T d1gz6a_           1 SPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR-----GGKAVANYDSVE   75 (302)
T ss_dssp             CCCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT-----TCEEEEECCCGG
T ss_pred             CCcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhc-----ccccccccchHH
Confidence            3688999999999999999999999999999999999764         34556666666443     446788999999


Q ss_pred             HHHHHHHHHhhcCCCeeEEEEcccCCCCC-C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCc
Q 021391           94 SVRKFASEYNSQGRPLNILINNAGIMASP-F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSE  171 (313)
Q Consensus        94 ~v~~~~~~~~~~~g~id~lv~~ag~~~~~-~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~  171 (313)
                      +++++++++.+++|+||+||||||+.... + +.+.++|++.+++|+.++++++|+++|+|+++     +.|+||++||.
T Consensus        76 ~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-----~~G~IV~isS~  150 (302)
T d1gz6a_          76 AGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ-----NYGRIIMTASA  150 (302)
T ss_dssp             GHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----TCEEEEEECCH
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhC-----CCcEEEEeCCh
Confidence            99999999999999999999999987653 3 88999999999999999999999999999984     47999999999


Q ss_pred             cccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHH
Q 021391          172 AHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTV  251 (313)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~  251 (313)
                      ++..+.+               +..+|++||+|+.+|+|+|+.|++++|  ||||+|+||++.|++....+  +      
T Consensus       151 ~~~~~~~---------------~~~~Y~asKaal~~lt~~la~E~~~~g--IrVN~I~PG~~~t~~~~~~~--~------  205 (302)
T d1gz6a_         151 SGIYGNF---------------GQANYSAAKLGLLGLANTLVIEGRKNN--IHCNTIAPNAGSRMTETVMP--E------  205 (302)
T ss_dssp             HHHHCCT---------------TCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEEECCSTTTGGGSC--H------
T ss_pred             hhcCCCC---------------CcHHHHHHHHHHHHHHHHHHHHHhccC--CceeeeCCCCCCcchhhcCc--H------
Confidence            9998877               788999999999999999999999999  99999999999887755432  1      


Q ss_pred             HHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCC--------------CccCCCHHHHHHHHHHHHh
Q 021391          252 GKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKP--------------NSQGQNMELAKKLWDFSMN  310 (313)
Q Consensus       252 ~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~  310 (313)
                      +..+..+|+|+|+.++||++ +.+ ++||+.|.+||+...              .....++|...+-|+...+
T Consensus       206 ~~~~~~~PedvA~~v~fL~S-~~a-~itG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~t~e~i~~~~~~i~d  276 (302)
T d1gz6a_         206 DLVEALKPEYVAPLVLWLCH-ESC-EENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICD  276 (302)
T ss_dssp             HHHHHSCGGGTHHHHHHHTS-TTC-CCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTC
T ss_pred             hhHhcCCHHHHHHHHHHHcC-CCc-CCCCcEEEeCCCceeEEEEeecCcccccCCCCCCCHHHHHHHHHHHhC
Confidence            12234679999999999997 654 799999997765321              1223467777667776543

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.5e-46  Score=323.56  Aligned_cols=230  Identities=22%  Similarity=0.274  Sum_probs=197.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      |+||++|||||++|||+++|+.|+++|++|++++|++++++++.+       ...+....+|+.+.+.++.+.+    .+
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~-------~~~~~~~~~d~~~~~~~~~~~~----~~   72 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK-------YPGIQTRVLDVTKKKQIDQFAN----EV   72 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG-------STTEEEEECCTTCHHHHHHHHH----HC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-------ccCCceeeeecccccccccccc----cc
Confidence            899999999999999999999999999999999999877655432       2357788999988776655544    56


Q ss_pred             CCeeEEEEcccCCCCC--CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccc-ccccCCCCC
Q 021391          107 RPLNILINNAGIMASP--FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHR-FAYSEGIRF  183 (313)
Q Consensus       107 g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~-~~~~~~~~~  183 (313)
                      +++|+||||+|.....  .+.+.++|++.+++|+.++++++|.+.|+|.+     ++.|+||+++|..+. .+.+     
T Consensus        73 ~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~-----~~~g~Ii~isS~~~~~~~~~-----  142 (245)
T d2ag5a1          73 ERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLA-----QKSGNIINMSSVASSVKGVV-----  142 (245)
T ss_dssp             SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-----HTCEEEEEECCSBTTTBCCT-----
T ss_pred             ccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCccccc-----CCCceeeeeechhhccCCcc-----
Confidence            8999999999987653  27899999999999999999999999999998     457999999998764 3444     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--------chhHhHHHHHHHhh
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--------GILRGFCNTVGKLV  255 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--------~~~~~~~~~~~~~~  255 (313)
                                ...+|+++|+|+++|+|+||.|++++|  ||||+|+||+++|++.+..        .....+.+..|.++
T Consensus       143 ----------~~~~Y~~sKaal~~l~r~lA~e~~~~g--IrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R  210 (245)
T d2ag5a1         143 ----------NRCVYSTTKAAVIGLTKSVAADFIQQG--IRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGR  210 (245)
T ss_dssp             ----------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSS
T ss_pred             ----------chhHHHHHHHHHHHHHHHHHHHhhhhC--cEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCC
Confidence                      678999999999999999999999999  9999999999999987642        12344555667778


Q ss_pred             cCChHHHHHHHHHHHccCCccCCCceeecCCcccC
Q 021391          256 LKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYK  290 (313)
Q Consensus       256 ~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~  290 (313)
                      +.+|+|+|+.++||++ |++.++||+.|.+||+..
T Consensus       211 ~~~pedva~~v~fL~s-~~s~~iTG~~i~VDGG~s  244 (245)
T d2ag5a1         211 FATAEEIAMLCVYLAS-DESAYVTGNPVIIDGGWS  244 (245)
T ss_dssp             CEEHHHHHHHHHHHHS-GGGTTCCSCEEEECTTGG
T ss_pred             CcCHHHHHHHHHHHhC-hhhCCCcCceEEeCCCcC
Confidence            8999999999999998 889999999999988753

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4e-45  Score=321.31  Aligned_cols=236  Identities=21%  Similarity=0.217  Sum_probs=204.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHH---cCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLAL---RGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~---~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      .|+||++|||||++|||+++|++|++   +|++|++++|+.++++++.+++...+++.++.+++||++++++++++++.+
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            48999999999999999999999996   799999999999999999999998888889999999999999999999998


Q ss_pred             hh----cCCCeeEEEEcccCCCC----CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          103 NS----QGRPLNILINNAGIMAS----PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       103 ~~----~~g~id~lv~~ag~~~~----~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                      .+    .++.+|++|||||...+    +. +.+.++|++++++|+.++++++|+++|+|.++.   ...|+||++||.++
T Consensus        83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~---~~~g~Iv~isS~~~  159 (259)
T d1oaaa_          83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSP---GLSKTVVNISSLCA  159 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCT---TCEEEEEEECCGGG
T ss_pred             HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcC---CCcccccccccccc
Confidence            76    34679999999997542    12 677899999999999999999999999998731   23579999999999


Q ss_pred             cccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc-------chhHh
Q 021391          174 RFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN-------GILRG  246 (313)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~-------~~~~~  246 (313)
                      ..+.+               ++.+|++||+|+++|+|+||.|  .+|  ||||+|+||+|+|++....       +....
T Consensus       160 ~~~~~---------------~~~~Y~asKaal~~lt~~la~e--~~g--IrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~  220 (259)
T d1oaaa_         160 LQPYK---------------GWGLYCAGKAARDMLYQVLAAE--EPS--VRVLSYAPGPLDNDMQQLARETSKDPELRSK  220 (259)
T ss_dssp             TSCCT---------------TCHHHHHHHHHHHHHHHHHHHH--CTT--EEEEEEECCSBSSHHHHHHHHHCSCHHHHHH
T ss_pred             cCCCc---------------cchHHHHHHHHHHHHHHHHHhC--CCC--CEEEEEEcCCCCCHHHHHhhhcCCCHHHHHH
Confidence            98877               7889999999999999999998  567  9999999999999986532       12233


Q ss_pred             HHHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecC
Q 021391          247 FCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSD  285 (313)
Q Consensus       247 ~~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~  285 (313)
                      +....+..++.+|+|+|+.+++|++ + .+++||++|++
T Consensus       221 ~~~~~~~~r~~~p~evA~~i~~ll~-~-~s~~TG~~idv  257 (259)
T d1oaaa_         221 LQKLKSDGALVDCGTSAQKLLGLLQ-K-DTFQSGAHVDF  257 (259)
T ss_dssp             HHHHHHTTCSBCHHHHHHHHHHHHH-H-CCSCTTEEEET
T ss_pred             HHhcCCCCCCCCHHHHHHHHHHHhh-h-ccCCCCCeEEe
Confidence            4444566678899999999999997 4 46999999875

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=4.9e-45  Score=319.57  Aligned_cols=234  Identities=24%  Similarity=0.244  Sum_probs=198.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCC-CHHHHHHHHHHHh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVS-SLASVRKFASEYN  103 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s-~~~~v~~~~~~~~  103 (313)
                      |+|+||+||||||++|||+++|++|+++|++|++++|+.++.+.. +++....++.++.++.+|++ +.++++++++++.
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~   79 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTAL-AELKAINPKVNITFHTYDVTVPVAESKKLLKKIF   79 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHH-HHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHH-HHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHH
Confidence            689999999999999999999999999999999999887775544 55666666778999999998 6778999999999


Q ss_pred             hcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          104 SQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      +++|+||+||||||..      +.+.|++++++|+.|++++++.++|+|.++.  ...+|+||+++|.++..+.+     
T Consensus        80 ~~~g~iDilvnnAG~~------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~--~~~~g~Ii~isS~~~~~~~~-----  146 (254)
T d1sbya1          80 DQLKTVDILINGAGIL------DDHQIERTIAINFTGLVNTTTAILDFWDKRK--GGPGGIIANICSVTGFNAIH-----  146 (254)
T ss_dssp             HHHSCCCEEEECCCCC------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGG--TCCCEEEEEECCGGGTSCCT-----
T ss_pred             HHcCCCCEEEeCCCCC------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcc--cCCCceEEEEechhhccCCC-----
Confidence            9999999999999964      5789999999999999999999999998742  23468999999999998877     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----hhHhHHHHHHHhhcCCh
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----ILRGFCNTVGKLVLKNI  259 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~  259 (313)
                                .+.+|++||+|+.+|+++|+.|++++|  ||||+|+||+|+|++.+...    ....+.+........+|
T Consensus       147 ----------~~~~Y~asKaal~~~t~~la~el~~~g--IrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (254)
T d1sbya1         147 ----------QVPVYSASKAAVVSFTNSLAKLAPITG--VTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTS  214 (254)
T ss_dssp             ----------TSHHHHHHHHHHHHHHHHHHHHHHHHS--EEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEH
T ss_pred             ----------CCHHHHHHHHHHHHHHHHHHhhccccC--eEEEEEEeCCCcCccccccccchhHHHHHHhccccCCCCCH
Confidence                      788999999999999999999999999  99999999999999765431    22222333333446689


Q ss_pred             HHHHHHHHHHHccCCccCCCceeecCCcc
Q 021391          260 PQGAATTCYVALHPQVQGVSGEYFSDSNI  288 (313)
Q Consensus       260 ~eva~~~~~l~~~~~~~~~tG~~~~~~~~  288 (313)
                      |++|+.++++++    ..+||+.+..||+
T Consensus       215 e~va~~~~~~~~----~~~tG~vi~vdgG  239 (254)
T d1sbya1         215 EQCGQNFVKAIE----ANKNGAIWKLDLG  239 (254)
T ss_dssp             HHHHHHHHHHHH----HCCTTCEEEEETT
T ss_pred             HHHHHHHHHhhh----CCCCCCEEEECCC
Confidence            999999888876    3469998887665

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-44  Score=313.31  Aligned_cols=217  Identities=25%  Similarity=0.262  Sum_probs=194.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      +.+++||+||||||++|||+++|++|+++|++|++++|+.++++++.+++...  +.++.++.||++|+++++++++++.
T Consensus         2 ~~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i~   79 (244)
T d1yb1a_           2 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVVDCSNREDIYSSAKKVK   79 (244)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHH
Confidence            35799999999999999999999999999999999999999999999999765  5689999999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          104 SQGRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      +++|++|++|||||......  +.+.+.|++++++|+.|+++++++++|.|.+     ++.|+||++||.++..+.|   
T Consensus        80 ~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~-----~~~G~Iv~isS~~~~~~~~---  151 (244)
T d1yb1a_          80 AEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTK-----NNHGHIVTVASAAGHVSVP---  151 (244)
T ss_dssp             HHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHH-----TTCEEEEEECCCC-CCCHH---
T ss_pred             HHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHh-----cCCceEEEeecchhcCCCC---
Confidence            99999999999999876533  7788999999999999999999999999998     5589999999999999888   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhcc---CCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCC
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKE---DGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKN  258 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~---~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  258 (313)
                                  ++++|++||+|+++|+++|+.|+++   +|  |+||+|+||+|+|++.+...        .+.....+
T Consensus       152 ------------~~~~Y~asKaal~~~~~~La~El~~~~~~g--I~V~~i~PG~v~T~~~~~~~--------~~~~~~~~  209 (244)
T d1yb1a_         152 ------------FLLAYCSSKFAAVGFHKTLTDELAALQITG--VKTTCLCPNFVNTGFIKNPS--------TSLGPTLE  209 (244)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHHHHHTTCTT--EEEEEEEETHHHHCSTTCTH--------HHHCCCCC
T ss_pred             ------------CcHHHHHHHHHHHHHHHHHHHHHHhhcCCC--EEEEEEEcCCCCChhhhCcC--------ccccCCCC
Confidence                        7899999999999999999999987   46  99999999999999987542        12234568


Q ss_pred             hHHHHHHHHHHHcc
Q 021391          259 IPQGAATTCYVALH  272 (313)
Q Consensus       259 ~~eva~~~~~l~~~  272 (313)
                      |+++|+.++..+..
T Consensus       210 pe~va~~i~~~~~~  223 (244)
T d1yb1a_         210 PEEVVNRLMHGILT  223 (244)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhc
Confidence            99999999988763

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-43  Score=306.86  Aligned_cols=234  Identities=21%  Similarity=0.216  Sum_probs=199.6

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      +++||+||||||++|||+++|++|+++|++|++++|+.+++++..+++     +.......+|+.+.+.++...+++...
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l-----~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----GNNCVFAPADVTSEKDVQTALALAKGK   76 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCCcccccccccccccccccccccccc
Confidence            689999999999999999999999999999999999999999888777     557889999999999999999999998


Q ss_pred             CCCeeEEEEcccCCCC-------C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhc-cCCCCCeEEEECCcccccc
Q 021391          106 GRPLNILINNAGIMAS-------P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQ-KSSREGRIVNVSSEAHRFA  176 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~-------~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~~~~g~iv~isS~~~~~~  176 (313)
                      ++.+|.+++|+++...       + .+.+.+.|++.+++|+.++++++|++.|+|..+.. +..++|+||++||.++..+
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~  156 (248)
T d2o23a1          77 FGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG  156 (248)
T ss_dssp             HSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC
T ss_pred             cccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccC
Confidence            8999999999876532       1 25677899999999999999999999999986422 1235789999999999988


Q ss_pred             ccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--chhHhHHHHHHH-
Q 021391          177 YSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--GILRGFCNTVGK-  253 (313)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--~~~~~~~~~~~~-  253 (313)
                      .|               ++.+|++||+|+++|+|+||.|++++|  ||||+|+||+++|++....  +....+.+..+. 
T Consensus       157 ~~---------------~~~~Y~asKaal~~lt~~la~e~~~~g--IrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~  219 (248)
T d2o23a1         157 QV---------------GQAAYSASKGGIVGMTLPIARDLAPIG--IRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFP  219 (248)
T ss_dssp             CT---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCC----------CHHHHTCSSS
T ss_pred             CC---------------CchHHHHHHHHHHHHHHHHHHHhcccC--cceeeeccCceecchhhcCCHHHHHHHHhcCCCC
Confidence            77               788999999999999999999999999  9999999999999997754  233344455554 


Q ss_pred             hhcCChHHHHHHHHHHHccCCccCCCceeec
Q 021391          254 LVLKNIPQGAATTCYVALHPQVQGVSGEYFS  284 (313)
Q Consensus       254 ~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~  284 (313)
                      +|+.+|+|+|++++||++   ++|+||+.|.
T Consensus       220 ~R~g~peevA~~v~fL~s---~~~itGq~I~  247 (248)
T d2o23a1         220 SRLGDPAEYAHLVQAIIE---NPFLNGEVIR  247 (248)
T ss_dssp             CSCBCHHHHHHHHHHHHH---CTTCCSCEEE
T ss_pred             CCCcCHHHHHHHHHHHHh---CCCCCceEeE
Confidence            678899999999999997   4799999875

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-43  Score=313.03  Aligned_cols=240  Identities=27%  Similarity=0.338  Sum_probs=197.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc-CCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           30 LTAIVTGASSGIGTETARVLALR-GVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      +++|||||++|||+++|++|+++ |++|++++|+.++++++.+++...  +.++.+++||++|.++++++++++.+++|+
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            45599999999999999999986 899999999999999999999887  457899999999999999999999999999


Q ss_pred             eeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC---
Q 021391          109 LNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF---  183 (313)
Q Consensus       109 id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~---  183 (313)
                      ||+||||||+.....  +.+.++|+..+++|+.+++++++.++|+|++       .|+||+++|+++..+.+.....   
T Consensus        82 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~-------~g~ivnisS~~~~~~~~~~~~y~~~  154 (275)
T d1wmaa1          82 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP-------QGRVVNVSSIMSVRALKSCSPELQQ  154 (275)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEECCHHHHHHHHTSCHHHHH
T ss_pred             cEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cCCcccccccceeccccccchhhhh
Confidence            999999999875533  5667889999999999999999999999966       5899999999876554321100   


Q ss_pred             -----------------------CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccC--CCcEEEEEeeCcccccCCc
Q 021391          184 -----------------------DKINDESAYNSFGAYGQSKLANILHAKELAKHLKED--GVNITANSLHPGSIVTNLF  238 (313)
Q Consensus       184 -----------------------~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~--g~~I~vn~i~PG~v~t~~~  238 (313)
                                             ..-.......+..+|++||+++..|++.++.+++++  +.+|+||+|+||+|+|++.
T Consensus       155 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~  234 (275)
T d1wmaa1         155 KFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMA  234 (275)
T ss_dssp             HHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTT
T ss_pred             hhcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcc
Confidence                                   000011122244679999999999999999999763  1239999999999999987


Q ss_pred             cccchhHhHHHHHHHhhcCChHHHHHHHHHHHc-cCCccCCCceeecCCcccCC
Q 021391          239 RYNGILRGFCNTVGKLVLKNIPQGAATTCYVAL-HPQVQGVSGEYFSDSNIYKP  291 (313)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~eva~~~~~l~~-~~~~~~~tG~~~~~~~~~~~  291 (313)
                      +..             ...+|+|+|++++|++. .+...+++|+|+.+.+..+|
T Consensus       235 ~~~-------------~~~~pee~A~~~~~~a~~~~~~~~~~G~~~~~~~v~~w  275 (275)
T d1wmaa1         235 GPK-------------ATKSPEEGAETPVYLALLPPDAEGPHGQFVSEKRVEQW  275 (275)
T ss_dssp             CTT-------------CSBCHHHHTHHHHHHHSCCTTCCCCCSCEEETTEEECC
T ss_pred             cCc-------------ccCCHHHHHHHHHHHHcCChhhcCCCeEEEECCEEecC
Confidence            643             13579999999999974 35677899999998777664

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.1e-41  Score=298.81  Aligned_cols=241  Identities=14%  Similarity=0.162  Sum_probs=207.1

Q ss_pred             CCCCCEEEEeCCCC--chHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           26 DGTGLTAIVTGASS--GIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        26 ~~~gk~~lItGas~--giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .|+||++|||||++  |||+++|+.|+++|++|++++|+++..+.+ +++...  ......+..|+++..++..+++++.
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~   78 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV-EEFAAQ--LGSDIVLQCDVAEDASIDTMFAELG   78 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHH-HHHHHH--TTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHhh--cCCcceeecccchHHHHHHHHHHhh
Confidence            37999999999998  899999999999999999999996654444 455544  3467788999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCCCC-------ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccc
Q 021391          104 SQGRPLNILINNAGIMASPF-------MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFA  176 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~  176 (313)
                      +.++++|++|||++......       ....+.+...+++|+.+.+.+++.+.+.+.+       ++.||++||..+..+
T Consensus        79 ~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~Ii~iss~~~~~~  151 (258)
T d1qsga_          79 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP-------GSALLTLSYLGAERA  151 (258)
T ss_dssp             TTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEEECGGGTSB
T ss_pred             hcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC-------CcEEEEecchhhccC
Confidence            99999999999998764321       3455678889999999999999999998865       678999999998887


Q ss_pred             ccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----hhHhHHHHHH
Q 021391          177 YSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----ILRGFCNTVG  252 (313)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----~~~~~~~~~~  252 (313)
                      .|               .+..|++||+|+++|+|++|.|++++|  ||||+|+||+|+|++.....    ......+..|
T Consensus       152 ~~---------------~~~~Y~~sKaal~~ltr~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~p  214 (258)
T d1qsga_         152 IP---------------NYNVMGLAKASLEANVRYMANAMGPEG--VRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTP  214 (258)
T ss_dssp             CT---------------TTTHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHST
T ss_pred             CC---------------CcHHHHHHHHHHHHHHHHHHHHhCccC--ceeecccccccccccccccchhhhHHHHHHhCCC
Confidence            77               678899999999999999999999999  99999999999999977642    3334455667


Q ss_pred             HhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCCcc
Q 021391          253 KLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQ  294 (313)
Q Consensus       253 ~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~~  294 (313)
                      .++..+|||+|+.++||++ +.++++||+.+.+||+......
T Consensus       215 l~R~~~peeia~~v~fL~s-~~s~~itG~~i~vDGG~~i~g~  255 (258)
T d1qsga_         215 IRRTVTIEDVGNSAAFLCS-DLSAGISGEVVHVDGGFSIAAM  255 (258)
T ss_dssp             TSSCCCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTGGGBCS
T ss_pred             CCCCcCHHHHHHHHHHHhC-chhcCccCceEEECcCHHHhcC
Confidence            7889999999999999998 8899999999999988766543

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-42  Score=305.70  Aligned_cols=232  Identities=21%  Similarity=0.221  Sum_probs=185.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEE---EEecCchhHHHHHHHHHHh-CCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVI---MAVRNMAAGKDVREAIVKE-IPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~---l~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      .|+||||||++|||+++|++|+++|++|+   .+.|+.+..+++.+..... ..+.++.++.+|++|+++++++++++.+
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            57899999999999999999999999754   4456655544444433332 2356899999999999999999998743


Q ss_pred             cCCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          105 QGRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                        |++|++|||+|......  +.+.++|++.+++|+.|+++++++++|+|.++     +.|+||++||.++..+.|    
T Consensus        82 --g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~-----~~G~Iv~isS~~g~~~~~----  150 (285)
T d1jtva_          82 --GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRR-----GSGRVLVTGSVGGLMGLP----  150 (285)
T ss_dssp             --SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEEEEGGGTSCCT----
T ss_pred             --cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHc-----CCCceEEEechhhcCCCC----
Confidence              78999999999876543  78999999999999999999999999999983     479999999999998877    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc-------------hhHh---
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG-------------ILRG---  246 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~-------------~~~~---  246 (313)
                                 ....|++||+|+++|+++|+.|++++|  ||||+|+||+|+|++.....             ....   
T Consensus       151 -----------~~~~Y~asKaal~~l~~~la~El~~~g--IrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (285)
T d1jtva_         151 -----------FNDVYCASKFALEGLCESLAVLLLPFG--VHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQ  217 (285)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHH
T ss_pred             -----------CchHHHHHHHHHHHHHHHHHHHhhccC--cEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHH
Confidence                       778999999999999999999999999  99999999999999876420             0011   


Q ss_pred             ---HHHHHHHhhcCChHHHHHHHHHHHccC--CccCCCceeec
Q 021391          247 ---FCNTVGKLVLKNIPQGAATTCYVALHP--QVQGVSGEYFS  284 (313)
Q Consensus       247 ---~~~~~~~~~~~~~~eva~~~~~l~~~~--~~~~~tG~~~~  284 (313)
                         .....+..+..+|+|+|+.+++++.++  ...+++|+.+.
T Consensus       218 ~~~~~~~~~~~~~~~PeeVA~~v~~~~~~~~p~~ry~~g~~~~  260 (285)
T d1jtva_         218 YLAHSKQVFREAAQNPEEVAEVFLTALRAPKPTLRYFTTERFL  260 (285)
T ss_dssp             HHHHHHHHHHHHCBCHHHHHHHHHHHHHCSSCCSEEESCSTTH
T ss_pred             HHHHHhhhhcccCCCHHHHHHHHHHHHhCCCCCeEEecHHHHH
Confidence               112344556789999999999999744  34567776443

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=1.9e-41  Score=301.07  Aligned_cols=244  Identities=16%  Similarity=0.158  Sum_probs=195.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecC-chhHHHHHHHHHHhCCCCceEEE-----------------EccCCC
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRN-MAAGKDVREAIVKEIPSAKVDAM-----------------ELDVSS   91 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~-~~~~~~~~~~l~~~~~~~~~~~~-----------------~~D~s~   91 (313)
                      .+||||||++|||+++|++|+++|++|++++++ .+..+.+.+++....+ .....+                 .+|+++
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~dv~~   81 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP-NSAITVQADLSNVATAPVSGADGSAPVTL   81 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcC-CceEEEEeecccccccccccccccccCCC
Confidence            579999999999999999999999999998765 5667777788877653 334444                 556999


Q ss_pred             HHHHHHHHHHHhhcCCCeeEEEEcccCCCCCC--ccCccchh--------------hhhhhhhhHHHHHHHHHHHHHHHh
Q 021391           92 LASVRKFASEYNSQGRPLNILINNAGIMASPF--MLSKDNIE--------------LQFATNHLGHFLLTHLLLDTMKKT  155 (313)
Q Consensus        92 ~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~--~~~~~~~~--------------~~~~~n~~~~~~l~~~~~~~l~~~  155 (313)
                      .++++++++++.+++|+||+||||||+.....  +.+.++|+              ..+.+|+.+++++.|.+.+.+...
T Consensus        82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  161 (284)
T d1e7wa_          82 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  161 (284)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence            99999999999999999999999999875422  44444444              468999999999999999987653


Q ss_pred             hc-cCCCCCeEEEECCccccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccc
Q 021391          156 AQ-KSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIV  234 (313)
Q Consensus       156 ~~-~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~  234 (313)
                      .. .....++||+++|.....+.+               ++.+|+++|+|+++|+|++|.|++++|  ||||+|+||++.
T Consensus       162 ~~~~~~~~~~ii~~~s~~~~~~~~---------------~~~~Y~asKaal~~lt~~lA~el~~~g--IrvN~I~PG~t~  224 (284)
T d1e7wa_         162 PAKHRGTNYSIINMVDAMTNQPLL---------------GYTIYTMAKGALEGLTRSAALELAPLQ--IRVNGVGPGLSV  224 (284)
T ss_dssp             CGGGSCSCEEEEEECCTTTTSCCT---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBC
T ss_pred             HHHhcCCCCcccccccccccCCcc---------------ceeeeccccccchhhhHHHHHHhCCcc--cccccccccccc
Confidence            21 124567899999998887766               778999999999999999999999999  999999999876


Q ss_pred             cCCccccchhHhHHHHHHH-hhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCC
Q 021391          235 TNLFRYNGILRGFCNTVGK-LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPN  292 (313)
Q Consensus       235 t~~~~~~~~~~~~~~~~~~-~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~  292 (313)
                      +.........+......+. ++..+|+|+|++++||++ +.++|+||+.|.+||+...+
T Consensus       225 ~~~~~~~~~~~~~~~~~pl~~R~~~peeiA~~v~fL~S-~~s~~itG~~i~VDGG~sl~  282 (284)
T d1e7wa_         225 LVDDMPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCS-SKAKYITGTCVKVDGGYSLT  282 (284)
T ss_dssp             CGGGSCHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGGC
T ss_pred             ccccCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhC-chhcCccCCeEEECcChhcc
Confidence            5443333444455555554 778899999999999998 88999999999999887654

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=2e-41  Score=299.74  Aligned_cols=260  Identities=17%  Similarity=0.131  Sum_probs=199.5

Q ss_pred             CCCCCEEEEeCCCC--chHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           26 DGTGLTAIVTGASS--GIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        26 ~~~gk~~lItGas~--giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .|+||++|||||+|  |||+++|++|+++|++|++++|++ ++++..+++..+  +....+..+|+++.++++++++++.
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~-~~~~~~~~l~~~--~~~~~~~~~d~~~~~~~~~~~~~~~   78 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE-SLEKRVRPIAQE--LNSPYVYELDVSKEEHFKSLYNSVK   78 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST-TTHHHHHHHHHH--TTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHhh--CCceeEeeecccchhhHHHHHHHHH
Confidence            37999999999865  999999999999999999999995 455566777766  4467789999999999999999999


Q ss_pred             hcCCCeeEEEEcccCCCCCC---ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC
Q 021391          104 SQGRPLNILINNAGIMASPF---MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG  180 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  180 (313)
                      +.+|++|++|||+|......   ....+.+......+...++.........+...    +.++.|+++++.+...+.+  
T Consensus        79 ~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~s~~~~~~~~~--  152 (274)
T d2pd4a1          79 KDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLL----NNGASVLTLSYLGSTKYMA--  152 (274)
T ss_dssp             HHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE----EEEEEEEEEECGGGTSBCT--
T ss_pred             HHcCCCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccccc----ccCcceeeecccccccccc--
Confidence            99999999999999875432   22233333333333333333333333332221    2244566666666665544  


Q ss_pred             CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc----hhHhHHHHHHHhhc
Q 021391          181 IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG----ILRGFCNTVGKLVL  256 (313)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~----~~~~~~~~~~~~~~  256 (313)
                                   ....|+++|+|+++++|+++.|++++|  ||||+|+||+++|++.....    .........+.++.
T Consensus       153 -------------~~~~y~asK~al~~ltr~lA~e~~~~G--IrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~  217 (274)
T d2pd4a1         153 -------------HYNVMGLAKAALESAVRYLAVDLGKHH--IRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKN  217 (274)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSC
T ss_pred             -------------cchhhhHHHHHHHHHHHhhHHHhcCcC--ceecccccCcccCccccccCchHHHHHHHhhhhhccCC
Confidence                         567899999999999999999999999  99999999999999876542    22333455566788


Q ss_pred             CChHHHHHHHHHHHccCCccCCCceeecCCcccCCCccC---CCHHHHHHHHHHHHh
Q 021391          257 KNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQG---QNMELAKKLWDFSMN  310 (313)
Q Consensus       257 ~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~  310 (313)
                      .+|+|+|+.++||++ +.+.++||+.|.+||+.......   ..++.++.||+-+++
T Consensus       218 ~~pedIA~~v~fL~S-~~s~~itG~~i~vDGG~~~~g~~~~~~~~~~~~~~~~~~~~  273 (274)
T d2pd4a1         218 VSLEEVGNAGMYLLS-SLSSGVSGEVHFVDAGYHVMGMGAVEEKDNKATLLWDLHKE  273 (274)
T ss_dssp             CCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGGBSSCCCTTCTTTTCCHHHHSSC
T ss_pred             cCHHHHHHHHHHHhC-hhhCCCcCceEEECCChhhccCCcccccccchhhhhhhhcc
Confidence            999999999999998 88999999999999887665554   356778899998754

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=2.2e-40  Score=289.06  Aligned_cols=228  Identities=21%  Similarity=0.308  Sum_probs=186.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHH---HcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh--
Q 021391           30 LTAIVTGASSGIGTETARVLA---LRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS--  104 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La---~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~--  104 (313)
                      |+||||||++|||+++|++|+   ++|++|++++|+.++++++. ++.+.  +.++.++.+|++|+++++++++++.+  
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~-~~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   79 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELE-DLAKN--HSNIHILEIDLRNFDAYDKLVADIEGVT   79 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHH-HHHHH--CTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HHHhc--CCcEEEEEEEeccHHHHHHHHhhhHHHh
Confidence            899999999999999999996   57999999999999888764 44444  45899999999999999999999854  


Q ss_pred             cCCCeeEEEEcccCCCCC--C-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhcc------CCCCCeEEEECCccccc
Q 021391          105 QGRPLNILINNAGIMASP--F-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQK------SSREGRIVNVSSEAHRF  175 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~--~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~------~~~~g~iv~isS~~~~~  175 (313)
                      +++++|+||||||+....  . +.+.++|++++++|+.+++++++.++|+|+++...      ....+++|+++|.++..
T Consensus        80 ~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~  159 (248)
T d1snya_          80 KDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSI  159 (248)
T ss_dssp             GGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCS
T ss_pred             hcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccccccccc
Confidence            678999999999986542  2 67888999999999999999999999999985321      12468999999998765


Q ss_pred             cccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhh
Q 021391          176 AYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLV  255 (313)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~  255 (313)
                      ..+            +.+++.+|++||+|+.+|+++++.|++++|  |+||+|+||+++|++......            
T Consensus       160 ~~~------------~~~~~~~Y~aSKaal~~lt~~la~e~~~~g--I~vn~v~PG~v~T~m~~~~~~------------  213 (248)
T d1snya_         160 QGN------------TDGGMYAYRTSKSALNAATKSLSVDLYPQR--IMCVSLHPGWVKTDMGGSSAP------------  213 (248)
T ss_dssp             TTC------------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEECCCSBCSTTTCTTCS------------
T ss_pred             CCC------------CCCChHHHHHHHHHHHHHHHHHHHHhCCCC--eEEEEcCCCcccCCcccccCC------------
Confidence            422            122567899999999999999999999999  999999999999999765421            


Q ss_pred             cCChHHHHHHHHHHHccCCccCCCceeecCCcc
Q 021391          256 LKNIPQGAATTCYVALHPQVQGVSGEYFSDSNI  288 (313)
Q Consensus       256 ~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~  288 (313)
                       ..+++.++.++.++. ......||++|..||.
T Consensus       214 -~~~~~~~~~i~~~i~-~l~~~~tG~~i~~dG~  244 (248)
T d1snya_         214 -LDVPTSTGQIVQTIS-KLGEKQNGGFVNYDGT  244 (248)
T ss_dssp             -BCHHHHHHHHHHHHH-HCCGGGTTCEECTTSC
T ss_pred             -CCchHHHHHHHHHHH-hcCccCCCcEEEECCe
Confidence             234555555666555 3345579999986654

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=8.9e-42  Score=309.83  Aligned_cols=242  Identities=12%  Similarity=0.111  Sum_probs=195.8

Q ss_pred             CCCEEEEeC--CCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCC----------ceEEE----------
Q 021391           28 TGLTAIVTG--ASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSA----------KVDAM----------   85 (313)
Q Consensus        28 ~gk~~lItG--as~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~----------~~~~~----------   85 (313)
                      ++|++||||  +++|||+++|++|+++|++|++++++.............+....          .....          
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            479999999  55899999999999999999999998765554443332221100          11222          


Q ss_pred             ----------EccCCCHHHHHHHHHHHhhcCCCeeEEEEcccCCCC---CC-ccCccchhhhhhhhhhHHHHHHHHHHHH
Q 021391           86 ----------ELDVSSLASVRKFASEYNSQGRPLNILINNAGIMAS---PF-MLSKDNIELQFATNHLGHFLLTHLLLDT  151 (313)
Q Consensus        86 ----------~~D~s~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~---~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~  151 (313)
                                .+|+++.++++++++++.+++|+||+||||+|....   +. +.+.++|++++++|+++.+.++|++.|+
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~  160 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence                      346778889999999999999999999999997643   23 7888999999999999999999999999


Q ss_pred             HHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhcc-CCCcEEEEEeeC
Q 021391          152 MKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKE-DGVNITANSLHP  230 (313)
Q Consensus       152 l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~-~g~~I~vn~i~P  230 (313)
                      |++       +|+||++||.++..+.|.              +...|+++|+|+++|+|+||.|+++ +|  ||||+|+|
T Consensus       161 m~~-------~GsIv~iss~~~~~~~p~--------------y~~~y~asKaal~~ltr~lA~Ela~~~g--IRVNaI~P  217 (329)
T d1uh5a_         161 MKP-------QSSIISLTYHASQKVVPG--------------YGGGMSSAKAALESDTRVLAYHLGRNYN--IRINTISA  217 (329)
T ss_dssp             EEE-------EEEEEEEECGGGTSCCTT--------------CTTTHHHHHHHHHHHHHHHHHHHHHHHC--CEEEEEEE
T ss_pred             ccc-------ccccccceeehhcccccc--------------cchhhhhhhccccccchhhHHHHhcccC--cEEEEEec
Confidence            965       689999999998877662              2457999999999999999999986 59  99999999


Q ss_pred             cccccCCccc-----------------------------------------------cchhHhHHHHHHHhhcCChHHHH
Q 021391          231 GSIVTNLFRY-----------------------------------------------NGILRGFCNTVGKLVLKNIPQGA  263 (313)
Q Consensus       231 G~v~t~~~~~-----------------------------------------------~~~~~~~~~~~~~~~~~~~~eva  263 (313)
                      |+|+|++...                                               ......+.+..|.++..+|+|+|
T Consensus       218 G~i~T~a~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA  297 (329)
T d1uh5a_         218 GPLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIG  297 (329)
T ss_dssp             CCCCCTTGGGCC------------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHH
T ss_pred             CcccchhhhcccchhhhhhhhhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHH
Confidence            9999943221                                               01233444556778899999999


Q ss_pred             HHHHHHHccCCccCCCceeecCCcccCCCc
Q 021391          264 ATTCYVALHPQVQGVSGEYFSDSNIYKPNS  293 (313)
Q Consensus       264 ~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~  293 (313)
                      ++++||+| +.++++||+.|.+||+.....
T Consensus       298 ~~v~fLaS-d~s~~iTGq~i~VDGG~~~~g  326 (329)
T d1uh5a_         298 SVASFLLS-RESRAITGQTIYVDNGLNIMF  326 (329)
T ss_dssp             HHHHHHHS-GGGTTCCSCEEEESTTGGGCS
T ss_pred             HHHHHHhC-chhCCccCCeEEECCCccccc
Confidence            99999998 899999999999998875543

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=7.6e-41  Score=299.18  Aligned_cols=251  Identities=16%  Similarity=0.136  Sum_probs=198.7

Q ss_pred             cCCCCCCCEEEEeCCCC--chHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCC-------C---ceEEEEcc--
Q 021391           23 QGIDGTGLTAIVTGASS--GIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPS-------A---KVDAMELD--   88 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~--giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~-------~---~~~~~~~D--   88 (313)
                      +.|+|+||++|||||++  |||+++|++|+++|++|++++|+.................       .   ......+|  
T Consensus         2 ~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (297)
T d1d7oa_           2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAV   81 (297)
T ss_dssp             CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTT
T ss_pred             CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence            57899999999999876  9999999999999999999999865443333222111100       0   01222333  


Q ss_pred             ------------------CCCHHHHHHHHHHHhhcCCCeeEEEEcccCCCC---CC-ccCccchhhhhhhhhhHHHHHHH
Q 021391           89 ------------------VSSLASVRKFASEYNSQGRPLNILINNAGIMAS---PF-MLSKDNIELQFATNHLGHFLLTH  146 (313)
Q Consensus        89 ------------------~s~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~---~~-~~~~~~~~~~~~~n~~~~~~l~~  146 (313)
                                        .++..+++++++++.+++|+||+||||||....   +. +.+.++|++.+++|+.+++.+++
T Consensus        82 ~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~  161 (297)
T d1d7oa_          82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhh
Confidence                              345567789999999999999999999997542   33 78899999999999999999999


Q ss_pred             HHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhc-cCCCcEEE
Q 021391          147 LLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLK-EDGVNITA  225 (313)
Q Consensus       147 ~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~-~~g~~I~v  225 (313)
                      +++|.+.+       +++++++++.+.....+.              ....|+++|+++..+++.++.+++ ++|  |||
T Consensus       162 ~~~~~~~~-------~g~~~~~~~~~~~~~~~~--------------~~~~y~~aKaa~~~l~~~~a~e~~~~~g--Irv  218 (297)
T d1d7oa_         162 HFLPIMNP-------GGASISLTYIASERIIPG--------------YGGGMSSAKAALESDTRVLAFEAGRKQN--IRV  218 (297)
T ss_dssp             HHGGGEEE-------EEEEEEEECGGGTSCCTT--------------CTTTHHHHHHHHHHHHHHHHHHHHHHHC--CEE
T ss_pred             HHHHHhhc-------CCcceeeeehhhcccccc--------------cccceecccccccccccccchhccccce--EEe
Confidence            99988876       567888877765543321              566899999999999999999996 678  999


Q ss_pred             EEeeCcccccCCccccc----hhHhHHHHHHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCcccCCCccCCC
Q 021391          226 NSLHPGSIVTNLFRYNG----ILRGFCNTVGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNSQGQN  297 (313)
Q Consensus       226 n~i~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~~~~~  297 (313)
                      |+|+||+++|++.....    +.+......|.++..+|+|+|+.++||++ +.+.|+||+.|.+||+......+.+
T Consensus       219 N~I~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~fL~S-~~a~~itGq~i~vDGG~s~~G~~~~  293 (297)
T d1d7oa_         219 NTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVS-PLASAITGATIYVDNGLNSMGVALD  293 (297)
T ss_dssp             EEEEECCCBCCCSSCCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTGGGCSSCTT
T ss_pred             cccccccccchhhhhccCCHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC-chhcCCcCceEEECcCHhhcCCCCC
Confidence            99999999999987643    33445556667788999999999999998 8999999999999988876665443

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-40  Score=291.04  Aligned_cols=217  Identities=24%  Similarity=0.196  Sum_probs=190.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      |+||+|||||||+|||+++|++|+++|++|++++|+.++++++.+++.... +..+..+.+|+++.+.++.+++.+.+.+
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~   90 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG-AASAHYIAGTMEDMTFAEQFVAQAGKLM   90 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT-CSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhh-cccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence            899999999999999999999999999999999999999999988877654 5678999999999999999999999999


Q ss_pred             CCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCC
Q 021391          107 RPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFD  184 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  184 (313)
                      |.+|+++||+|......  +.+.+++++++++|+.+++.+++.++|+|++.      +|+||++||.++..+.|      
T Consensus        91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~------~G~ii~isS~~~~~~~p------  158 (269)
T d1xu9a_          91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS------NGSIVVVSSLAGKVAYP------  158 (269)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEEEEGGGTSCCT------
T ss_pred             CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc------CCcceEeccchhcCCCC------
Confidence            99999999999875532  77889999999999999999999999999763      68999999999998877      


Q ss_pred             CCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHHHH
Q 021391          185 KINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGAA  264 (313)
Q Consensus       185 ~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~eva~  264 (313)
                               ...+|++||+|+++|+++|+.|++++|.+|+||+|+||+|+|++.....      .........+++++|+
T Consensus       159 ---------~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~------~~~~~~~~~~~e~~a~  223 (269)
T d1xu9a_         159 ---------MVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAV------SGIVHMQAAPKEECAL  223 (269)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHS------CGGGGGGCBCHHHHHH
T ss_pred             ---------CchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhc------cCCccccCCCHHHHHH
Confidence                     7889999999999999999999987655699999999999999754321      1112233567899999


Q ss_pred             HHHHHHc
Q 021391          265 TTCYVAL  271 (313)
Q Consensus       265 ~~~~l~~  271 (313)
                      .++....
T Consensus       224 ~i~~~~~  230 (269)
T d1xu9a_         224 EIIKGGA  230 (269)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHhh
Confidence            9988765

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=8.1e-40  Score=287.77  Aligned_cols=245  Identities=16%  Similarity=0.119  Sum_probs=198.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchh-HHHHHHHHHHhCCCCceEEEEccCCC----HHHHHHHHHHHhh
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAA-GKDVREAIVKEIPSAKVDAMELDVSS----LASVRKFASEYNS  104 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~D~s~----~~~v~~~~~~~~~  104 (313)
                      .++|||||++|||+++|++|+++|++|++++|+.++ .+++.+++.... +.+.....+|+.+    .+.++++++++.+
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR-AGSAVLCKGDLSLSSSLLDCCEDIIDCSFR   80 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSTTHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhc-CCceEEEecccccchhHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999998655 567777887765 3456666665544    5778888899999


Q ss_pred             cCCCeeEEEEcccCCCCCC-------------ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCc
Q 021391          105 QGRPLNILINNAGIMASPF-------------MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSE  171 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~-------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~  171 (313)
                      ++|+||++|||||+..+..             ......+...+..|+.+++...+...+.+..........+.+++++|.
T Consensus        81 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (266)
T d1mxha_          81 AFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDA  160 (266)
T ss_dssp             HHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCG
T ss_pred             HhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhc
Confidence            9999999999999865421             122344667788899999999998888877654444556788899999


Q ss_pred             cccccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHH
Q 021391          172 AHRFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTV  251 (313)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~  251 (313)
                      .+..+.|               ++..|++||+|+++++|++|.+++++|  ||||+|+||+++|++.........+.+..
T Consensus       161 ~~~~~~~---------------~~~~Y~asKaal~~lt~~lA~e~~~~g--IrVN~I~PG~i~t~~~~~~~~~~~~~~~~  223 (266)
T d1mxha_         161 MTDLPLP---------------GFCVYTMAKHALGGLTRAAALELAPRH--IRVNAVAPGLSLLPPAMPQETQEEYRRKV  223 (266)
T ss_dssp             GGGSCCT---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBSCCSSSCHHHHHHHHTTC
T ss_pred             cccccCc---------------chhhhhhhHHHHhhhHHHHHHHhCccC--cEEEEeccCcEeccccCCHHHHHHHHhcC
Confidence            8887777               788999999999999999999999999  99999999999999877665666666666


Q ss_pred             HHhh-cCChHHHHHHHHHHHccCCccCCCceeecCCcccCCCc
Q 021391          252 GKLV-LKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNS  293 (313)
Q Consensus       252 ~~~~-~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~  293 (313)
                      +..+ ..+|+|+|++++||++ +.+.++||+.|.+||+.....
T Consensus       224 pl~r~~~~peeva~~v~fL~s-~~s~~itG~~i~vDGG~~l~~  265 (266)
T d1mxha_         224 PLGQSEASAAQIADAIAFLVS-KDAGYITGTTLKVDGGLILAR  265 (266)
T ss_dssp             TTTSCCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGGCC
T ss_pred             CCCCCCCCHHHHHHHHHHHhC-chhCCccCCeEEECccHhhhC
Confidence            6644 4799999999999998 889999999999998876543

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.1e-39  Score=284.91  Aligned_cols=232  Identities=26%  Similarity=0.300  Sum_probs=181.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      |+.|+||||||++|||+++|++|+++|+  +|++++|+.++++++.+    . .+.+++++.+|+++.++++++++++.+
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~----~-~~~~~~~~~~Dvs~~~~v~~~~~~i~~   75 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS----I-KDSRVHVLPLTVTCDKSLDTFVSKVGE   75 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT----C-CCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHH----h-hCCceEEEEEecCCHHHHHHHHHHHHH
Confidence            4679999999999999999999999996  79999999988776432    2 256899999999999999999999988


Q ss_pred             cCC--CeeEEEEcccCCCC--C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhcc------CCCCCeEEEECCccc
Q 021391          105 QGR--PLNILINNAGIMAS--P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQK------SSREGRIVNVSSEAH  173 (313)
Q Consensus       105 ~~g--~id~lv~~ag~~~~--~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~------~~~~g~iv~isS~~~  173 (313)
                      .++  +||+||||||+...  + .+.+.++|++++++|+.|++++++.++|+|++....      ....+++++++|..+
T Consensus        76 ~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~  155 (250)
T d1yo6a1          76 IVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG  155 (250)
T ss_dssp             HHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGG
T ss_pred             HhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccc
Confidence            765  49999999998644  2 267888999999999999999999999999986422      123578999998776


Q ss_pred             cccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHH
Q 021391          174 RFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGK  253 (313)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~  253 (313)
                      ....+.        ....+.+..+|++||+|+.+|+++|+.|++++|  |+||+|+||+|+|+|....            
T Consensus       156 ~~~~~~--------~~~~~~~~~aY~aSKaal~~l~~~la~el~~~g--I~v~~i~PG~v~T~m~~~~------------  213 (250)
T d1yo6a1         156 SITDNT--------SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDN--VLVVNFCPGWVQTNLGGKN------------  213 (250)
T ss_dssp             CSTTCC--------STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGT--CEEEEEECCCC--------------------
T ss_pred             cccCCc--------ccccchhHHHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCCCCCCCCCCC------------
Confidence            544321        112223456799999999999999999999999  9999999999999986532            


Q ss_pred             hhcCChHHHHHHHHHHHccCCccCCCceeecCCc
Q 021391          254 LVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSN  287 (313)
Q Consensus       254 ~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~  287 (313)
                       ...+|||.++.++..+. ......+|++|..++
T Consensus       214 -~~~~~e~~a~~~~~~~~-~~~~~~sG~f~~~~g  245 (250)
T d1yo6a1         214 -AALTVEQSTAELISSFN-KLDNSHNGRFFMRNL  245 (250)
T ss_dssp             ------HHHHHHHHHHHT-TCCGGGTTCEEETTE
T ss_pred             -CCCCHHHHHHHHHHHHh-cCCCCCCeEEECCCC
Confidence             13568999999999997 444567999998765

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=4.8e-39  Score=278.78  Aligned_cols=230  Identities=22%  Similarity=0.187  Sum_probs=188.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      .|+||||||++|||+++|++|+++|++|++++|+.+              +.+....++|+++...+..+..+...... 
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~--------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-   65 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE--------------GEDLIYVEGDVTREEDVRRAVARAQEEAP-   65 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC--------------SSSSEEEECCTTCHHHHHHHHHHHHHHSC-
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc--------------cccceEeeccccchhhhHHHHHhhhcccc-
Confidence            389999999999999999999999999999999854              34577889999999999999988877764 


Q ss_pred             eeEEEEcccCCCC------CCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhh-ccCCCCCeEEEECCccccccccCCC
Q 021391          109 LNILINNAGIMAS------PFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTA-QKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       109 id~lv~~ag~~~~------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                      .+.++++++....      ....+.+.+++.+++|+.+++.+++.+.+.+.+.. ...++.|+||++||.++..+.+   
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~---  142 (241)
T d1uaya_          66 LFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI---  142 (241)
T ss_dssp             EEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT---
T ss_pred             ccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCC---
Confidence            5556666654322      11456788999999999999999999999976532 1224579999999999998877   


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccc--hhHhHHHHHHH-hhcCC
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNG--ILRGFCNTVGK-LVLKN  258 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~--~~~~~~~~~~~-~~~~~  258 (313)
                                  +..+|+++|+|+++|+|+||.|++++|  ||||+|+||+++|++.....  .........+. +++.+
T Consensus       143 ------------~~~~Y~asKaal~~lt~~lA~ela~~g--IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~R~g~  208 (241)
T d1uaya_         143 ------------GQAAYAASKGGVVALTLPAARELAGWG--IRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGR  208 (241)
T ss_dssp             ------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCCC
T ss_pred             ------------CchhhHHHHHHHHHHHHHHHHHHhhcC--CceeeecCCcccccccchhhhhHHHHHHhcCCCCCCCcC
Confidence                        788999999999999999999999999  99999999999999876652  12222333333 57889


Q ss_pred             hHHHHHHHHHHHccCCccCCCceeecCCcccCCCc
Q 021391          259 IPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPNS  293 (313)
Q Consensus       259 ~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~  293 (313)
                      |+|+|++++||++   ++++||+.|.+||+....+
T Consensus       209 pedvA~~v~fL~s---~~~iTG~~i~VDGG~~m~p  240 (241)
T d1uaya_         209 PEEYAALVLHILE---NPMLNGEVVRLDGALRMAP  240 (241)
T ss_dssp             HHHHHHHHHHHHH---CTTCCSCEEEESTTCCCCC
T ss_pred             HHHHHHHHHHHHh---CCCCCCCEEEECCcccCCC
Confidence            9999999999997   3699999999998876543

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=7.7e-39  Score=281.98  Aligned_cols=237  Identities=18%  Similarity=0.176  Sum_probs=189.7

Q ss_pred             CCCCCEEEEeCC--CCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           26 DGTGLTAIVTGA--SSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        26 ~~~gk~~lItGa--s~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .|+||++|||||  ++|||+++|++|+++|++|++++|+.++..+   ++.++. +.+...+++|++++++++++++.+.
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~---~~~~~~-~~~~~~~~~dv~~~~~~~~~~~~v~   78 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQ---RITDRL-PAKAPLLELDVQNEEHLASLAGRVT   78 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHH---HHHTTS-SSCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHH---HHHHHc-CCceeeEeeecccccccccccchhh
Confidence            379999999994  5799999999999999999999999876543   333333 4567889999999999999999986


Q ss_pred             hc---CCCeeEEEEcccCCCC------C-CccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccc
Q 021391          104 SQ---GRPLNILINNAGIMAS------P-FMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAH  173 (313)
Q Consensus       104 ~~---~g~id~lv~~ag~~~~------~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~  173 (313)
                      +.   ++.+|+++||+|+...      + .+.+.+.+...+++|+.+.+...+...+.+.+        +.+++++|...
T Consensus        79 ~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~i~~~s~~~  150 (268)
T d2h7ma1          79 EAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP--------GGSIVGMDFDP  150 (268)
T ss_dssp             HHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--------EEEEEEEECCC
T ss_pred             hccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccc--------ccccccccccc
Confidence            65   5789999999997642      1 25677888899999999999888888766533        34555555555


Q ss_pred             cccccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc------------
Q 021391          174 RFAYSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN------------  241 (313)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~------------  241 (313)
                      ..+.|               .+..|+++|+|+++++|+++.|++++|  ||||+|+||+++|++....            
T Consensus       151 ~~~~p---------------~~~~y~~sK~a~~~ltr~lA~e~~~~g--IrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~  213 (268)
T d2h7ma1         151 SRAMP---------------AYNWMTVAKSALESVNRFVAREAGKYG--VRSNLVAAGPIRTLAMSAIVGGALGEEAGAQ  213 (268)
T ss_dssp             SSCCT---------------TTHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCCCCHHHHHHHTTTTCHHHHHH
T ss_pred             cccCc---------------ccchhhccccchhhccccchhhhhccC--CcceEEecCCCCChhhhhhccchhhhhhccc
Confidence            55555               678999999999999999999999999  9999999999999876421            


Q ss_pred             --chhHhHHHHHHHhh-cCChHHHHHHHHHHHccCCccCCCceeecCCcccCCC
Q 021391          242 --GILRGFCNTVGKLV-LKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIYKPN  292 (313)
Q Consensus       242 --~~~~~~~~~~~~~~-~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~~~~  292 (313)
                        .+.+.+.+..|..+ +.+|+|+|++++||++ |.+.++||+.|.+||+.+.+
T Consensus       214 ~~~~~~~~~~~~pl~rr~~~p~dva~~v~fL~S-d~a~~iTG~~i~vDGG~~~~  266 (268)
T d2h7ma1         214 IQLLEEGWDQRAPIGWNMKDATPVAKTVCALLS-DWLPATTGDIIYADGGAHTQ  266 (268)
T ss_dssp             HHHHHHHHHHHCTTCCCTTCCHHHHHHHHHHHS-SSCTTCCSEEEEESTTGGGC
T ss_pred             hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhC-chhcCccCCEEEECcCcccc
Confidence              11122223334434 7899999999999997 99999999999999988654

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=8.4e-39  Score=276.97  Aligned_cols=215  Identities=14%  Similarity=0.060  Sum_probs=180.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC-
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG-  106 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~-  106 (313)
                      +||+||||||++|||+++|++|+++|++|++++++....            ......+.+|.++.++++.+...+.+.+ 
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE------------ASASVIVKMTDSFTEQADQVTAEVGKLLG   68 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT------------SSEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccccceeecccCcHHHHHHHHHHHHHHhC
Confidence            589999999999999999999999999999999875431            3356677889999999888888876653 


Q ss_pred             -CCeeEEEEcccCCCC--CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC
Q 021391          107 -RPLNILINNAGIMAS--PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR  182 (313)
Q Consensus       107 -g~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  182 (313)
                       +++|+||||||....  .. +.+.+.|++.+++|+.+++++++.+.|+|++       +|+||++||.++..+.+    
T Consensus        69 ~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~-------~G~Iv~isS~~~~~~~~----  137 (236)
T d1dhra_          69 DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE-------GGLLTLAGAKAALDGTP----  137 (236)
T ss_dssp             TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCGGGGSCCT----
T ss_pred             CCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc-------ccceeEEccHHHcCCcc----
Confidence             479999999996543  22 5567889999999999999999999999966       68999999999988877    


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhc--cCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChH
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLK--EDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIP  260 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~--~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  260 (313)
                                 .+.+|++||+|+++|+|+|+.|++  ++|  ||||+|+||+++|++.+......      ......+|+
T Consensus       138 -----------~~~~Y~asKaal~~lt~~la~El~~~~~g--I~vn~v~PG~v~T~~~~~~~~~~------~~~~~~~pe  198 (236)
T d1dhra_         138 -----------GMIGYGMAKGAVHQLCQSLAGKNSGMPSG--AAAIAVLPVTLDTPMNRKSMPEA------DFSSWTPLE  198 (236)
T ss_dssp             -----------TBHHHHHHHHHHHHHHHHHTSTTSSCCTT--CEEEEEEESCEECHHHHHHSTTS------CGGGSEEHH
T ss_pred             -----------CCcccHHHHHHHHHHHHHHHHHhccCCCc--EEEEEEEeccCcCCcchhhCccc------hhhcCCCHH
Confidence                       788999999999999999999998  467  99999999999999865321111      123456799


Q ss_pred             HHHHHHHHHHccCCccCCCceeecC
Q 021391          261 QGAATTCYVALHPQVQGVSGEYFSD  285 (313)
Q Consensus       261 eva~~~~~l~~~~~~~~~tG~~~~~  285 (313)
                      ++|+.+++|++ +...++||..+.+
T Consensus       199 ~va~~~~~l~s-~~~~~i~G~~i~v  222 (236)
T d1dhra_         199 FLVETFHDWIT-GNKRPNSGSLIQV  222 (236)
T ss_dssp             HHHHHHHHHHT-TTTCCCTTCEEEE
T ss_pred             HHHHHHHHHhC-CCccCCCCCeEEE
Confidence            99999999998 8889999986653

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=4e-38  Score=272.50  Aligned_cols=217  Identities=14%  Similarity=0.043  Sum_probs=179.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh--cC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS--QG  106 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~--~~  106 (313)
                      +++||||||++|||+++|++|+++|++|++++|+.++.            ......+.+|+.+.++.....+.+..  ++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ------------ADSNILVDGNKNWTEQEQSILEQTASSLQG   69 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT------------SSEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc------------ccccceeccccCchhHHHHHHHHHHHHhcC
Confidence            45679999999999999999999999999999986531            23456677888888888777777666  56


Q ss_pred             CCeeEEEEcccCCCC--CC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          107 RPLNILINNAGIMAS--PF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       107 g~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                      |+||+||||||+...  +. +...+.|+.++++|+.++++++|+++|+|++       +|+||++||.++..+.|     
T Consensus        70 g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~-------~g~Iv~isS~~~~~~~~-----  137 (235)
T d1ooea_          70 SQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP-------GGLLQLTGAAAAMGPTP-----  137 (235)
T ss_dssp             CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCGGGGSCCT-----
T ss_pred             CCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhccccccc-------ceEEEEeccHHhcCCcc-----
Confidence            899999999997543  22 4445789999999999999999999999966       68999999999998877     


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhcCChHHHH
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVLKNIPQGA  263 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~eva  263 (313)
                                .+.+|++||+|+++|+++|+.|++..+.+|+||+|+||+++|++.+..-      .........+|++++
T Consensus       138 ----------~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~------~~~~~~~~~~~~~va  201 (235)
T d1ooea_         138 ----------SMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWM------PNADHSSWTPLSFIS  201 (235)
T ss_dssp             ----------TBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHS------TTCCGGGCBCHHHHH
T ss_pred             ----------cccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhC------cCCccccCCCHHHHH
Confidence                      7889999999999999999999985444499999999999998755321      111223456899999


Q ss_pred             HHHHHHHccCCccCCCceeecC
Q 021391          264 ATTCYVALHPQVQGVSGEYFSD  285 (313)
Q Consensus       264 ~~~~~l~~~~~~~~~tG~~~~~  285 (313)
                      +.+++|+.++....+||..+.+
T Consensus       202 ~~~~~~l~~~~~~~~tG~~i~v  223 (235)
T d1ooea_         202 EHLLKWTTETSSRPSSGALLKI  223 (235)
T ss_dssp             HHHHHHHHCGGGCCCTTCEEEE
T ss_pred             HHHHHHhcCccccCCCceEEEE
Confidence            9999887768888999998876

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=3.3e-34  Score=250.52  Aligned_cols=228  Identities=18%  Similarity=0.174  Sum_probs=165.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC-CC
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG-RP  108 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~-g~  108 (313)
                      |+||||||++|||+++|++|+++|++|++++|+.++                   ..+|+++.........++..+. +.
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-------------------~~~d~~~~~~~~~~~~~~~~~~~~~   62 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-------------------VIADLSTAEGRKQAIADVLAKCSKG   62 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-------------------EECCTTSHHHHHHHHHHHHTTCTTC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-------------------HHHHhcCHHHHHHHHHHHHHHhCCC
Confidence            899999999999999999999999999999987432                   3679999998888777665554 57


Q ss_pred             eeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCC---
Q 021391          109 LNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDK---  185 (313)
Q Consensus       109 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~---  185 (313)
                      +|++|||||+..     ..+.+.....+|..+...+.+...+.+.+.     ....+.++.+...............   
T Consensus        63 id~lv~~Ag~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (257)
T d1fjha_          63 MDGLVLCAGLGP-----QTKVLGNVVSVNYFGATELMDAFLPALKKG-----HQPAAVVISSVASAHLAFDKNPLALALE  132 (257)
T ss_dssp             CSEEEECCCCCT-----TCSSHHHHHHHHTHHHHHHHHHHHHHHHTS-----SSCEEEEECCGGGGSSCGGGCTTHHHHH
T ss_pred             CcEEEEcCCCCC-----cHHHHHHHHHHHHHHHHHHHHHhhhhhhhh-----ccCcceeeeeccccchhhhhhhhhhhcc
Confidence            999999998753     346678889999999999999999998873     3456666655433211100000000   


Q ss_pred             ----------CCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----chhHhHHHH-
Q 021391          186 ----------INDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----GILRGFCNT-  250 (313)
Q Consensus       186 ----------~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----~~~~~~~~~-  250 (313)
                                .......++..+|++||+|+++|+|++|.|++++|  ||||+|+||+++|++.+..    .+.+.+.+. 
T Consensus       133 ~g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~  210 (257)
T d1fjha_         133 AGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAG--VRLNTIAPGATETPLLQAGLQDPRYGESIAKFV  210 (257)
T ss_dssp             HTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTT--CEEEEEEECC---------------------CC
T ss_pred             CCcEEEEeeehhccCCCcchHHHHHHhhhhhcccccccccccccc--ccccccccCCcCChhHHhhcCCHHHHHHHHhcC
Confidence                      00000112345799999999999999999999999  9999999999999987653    122222222 


Q ss_pred             HHHhhcCChHHHHHHHHHHHccCCccCCCceeecCCccc
Q 021391          251 VGKLVLKNIPQGAATTCYVALHPQVQGVSGEYFSDSNIY  289 (313)
Q Consensus       251 ~~~~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~~~  289 (313)
                      .|.+|..+|+|+|+.++||++ +.++++||+.|.+||+.
T Consensus       211 ~PlgR~g~p~eva~~v~fL~S-~~s~~itG~~i~vDGG~  248 (257)
T d1fjha_         211 PPMGRRAEPSEMASVIAFLMS-PAASYVHGAQIVIDGGI  248 (257)
T ss_dssp             CSTTSCCCTHHHHHHHHHHTS-GGGTTCCSCEEEESTTH
T ss_pred             CCCCCCcCHHHHHHHHHHHhC-chhCCccCceEEeCCCc
Confidence            367888999999999999998 88999999999988875

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.97  E-value=7.1e-30  Score=223.34  Aligned_cols=216  Identities=20%  Similarity=0.216  Sum_probs=164.7

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCc---hhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNM---AAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKF   98 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~   98 (313)
                      +.|+- ++++|||||++|||+++|++|+++|+ +|++++|+.   +..++..+++...  +.++.++.||++|.++++++
T Consensus         4 ~~~~p-~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dv~d~~~~~~~   80 (259)
T d2fr1a1           4 DEWKP-TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL--GARTTVAACDVTDRESVREL   80 (259)
T ss_dssp             CCCCC-CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHH
T ss_pred             cccCC-cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhc--cccccccccccchHHHHHHh
Confidence            33443 35999999999999999999999999 699999974   4456666666554  67899999999999999999


Q ss_pred             HHHHhhcCCCeeEEEEcccCCCCCC--ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccc
Q 021391           99 ASEYNSQGRPLNILINNAGIMASPF--MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFA  176 (313)
Q Consensus        99 ~~~~~~~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~  176 (313)
                      ++++.+. +++|++|||+|......  +.+.++++..+++|+.+++++.+.+.    +     ...++||++||+++..+
T Consensus        81 ~~~i~~~-~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~----~-----~~~~~iv~~SS~a~~~g  150 (259)
T d2fr1a1          81 LGGIGDD-VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTR----E-----LDLTAFVLFSSFASAFG  150 (259)
T ss_dssp             HHTSCTT-SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHT----T-----SCCSEEEEEEEHHHHTC
T ss_pred             hcccccc-ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhh----c-----cCCceEeeecchhhccC
Confidence            9987654 58999999999876643  78889999999999999999877542    2     33689999999999998


Q ss_pred             ccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHhhc
Q 021391          177 YSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKLVL  256 (313)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~  256 (313)
                      .+               ++..|+++|++++.|++.    ++.+|  |++++|+||++.++..........+ .. .....
T Consensus       151 ~~---------------~~~~YaAaka~l~~la~~----~~~~G--i~v~~I~pg~~~~~g~~~~~~~~~~-~~-~G~~~  207 (259)
T d2fr1a1         151 AP---------------GLGGYAPGNAYLDGLAQQ----RRSDG--LPATAVAWGTWAGSGMAEGPVADRF-RR-HGVIE  207 (259)
T ss_dssp             CT---------------TCTTTHHHHHHHHHHHHH----HHHTT--CCCEEEEECCBC------------C-TT-TTEEC
T ss_pred             Cc---------------ccHHHHHHHHhHHHHHHH----HHhCC--CCEEECCCCcccCCccccchHHHHH-Hh-cCCCC
Confidence            88               788999999998876554    55678  9999999999865432221111110 00 01124


Q ss_pred             CChHHHHHHHHHHHccCC
Q 021391          257 KNIPQGAATTCYVALHPQ  274 (313)
Q Consensus       257 ~~~~eva~~~~~l~~~~~  274 (313)
                      .+|+++++.+..++.++.
T Consensus       208 ~~~~~~~~~l~~~l~~~~  225 (259)
T d2fr1a1         208 MPPETACRALQNALDRAE  225 (259)
T ss_dssp             BCHHHHHHHHHHHHHTTC
T ss_pred             CCHHHHHHHHHHHHhCCC
Confidence            579999999999987543

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.82  E-value=2.3e-19  Score=162.95  Aligned_cols=220  Identities=11%  Similarity=0.039  Sum_probs=152.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCch-----hHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMA-----AGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~-----~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .|+||||||||.||++++++|+++|++|++++|...     ..+....+....  ..++.++++|++|.++++++++.+ 
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~-   77 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTC--NPKFHLHYGDLSDTSNLTRILREV-   77 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-----------------------CCEEECCCCSSCHHHHHHHHHHH-
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhc--CCCeEEEEeecCCHHHHHHHHhcc-
Confidence            389999999999999999999999999999998543     222222222112  457999999999999999999986 


Q ss_pred             hcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          104 SQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                          .+|+++|+|+.....  .+.++.+..+++|+.++.++++++...-.+      +..++|++||...+ +.+..   
T Consensus        78 ----~~d~v~h~aa~~~~~--~~~~~~~~~~~~Nv~gt~nllea~~~~~~~------~~~r~i~~SS~~vY-G~~~~---  141 (357)
T d1db3a_          78 ----QPDEVYNLGAMSHVA--VSFESPEYTADVDAMGTLRLLEAIRFLGLE------KKTRFYQASTSELY-GLVQE---  141 (357)
T ss_dssp             ----CCSEEEECCCCCTTT--TTTSCHHHHHHHHTHHHHHHHHHHHHTTCT------TTCEEEEEEEGGGG-TTCCS---
T ss_pred             ----CCCEEEEeecccccc--hhhhCHHHHHHHHHHHHHHHHHHHHHhCCC------CCcEEEEEEchhhh-CCCCC---
Confidence                789999999976443  345667788999999999999998654222      24579999986543 33321   


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHH---HHh------
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTV---GKL------  254 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~---~~~------  254 (313)
                      ..+++..++.+...|+.||.+.+.+++.++..++     +.+..+.|+.+-.|..........+...+   ...      
T Consensus       142 ~~~~E~~~~~P~~~Y~~sK~~~E~~~~~~~~~~~-----l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~  216 (357)
T d1db3a_         142 IPQKETTPFYPRSPYAVAKLYAYWITVNYRESYG-----MYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLY  216 (357)
T ss_dssp             SSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEE
T ss_pred             CCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHhC-----CCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEE
Confidence            2344555666778899999999999999887763     67778888888777543321111111111   100      


Q ss_pred             --------hcCChHHHHHHHHHHHcc
Q 021391          255 --------VLKNIPQGAATTCYVALH  272 (313)
Q Consensus       255 --------~~~~~~eva~~~~~l~~~  272 (313)
                              -....+|++++++.++.+
T Consensus       217 ~g~~~~~r~~~~v~D~~~a~~~~~~~  242 (357)
T d1db3a_         217 LGNMDSLRDWGHAKDYVKMQWMMLQQ  242 (357)
T ss_dssp             ESCTTCEECCEEHHHHHHHHHHTTSS
T ss_pred             ECCCCeeecceeechHHHHHHHHHhC
Confidence                    134588999999887763

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.80  E-value=4.9e-21  Score=159.17  Aligned_cols=157  Identities=13%  Similarity=0.069  Sum_probs=116.8

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      ....+|+||++|||||++|||+++|+.|+++|++|++++|+.+++++..+++...   .++.+..+|+++.+++++++  
T Consensus        16 ~~~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~--   90 (191)
T d1luaa1          16 AAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR---FKVNVTAAETADDASRAEAV--   90 (191)
T ss_dssp             HTTSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH---HTCCCEEEECCSHHHHHHHT--
T ss_pred             HcCCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhc---cchhhhhhhcccHHHHHHHh--
Confidence            3577999999999999999999999999999999999999999999998888764   24567899999999887664  


Q ss_pred             HhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC
Q 021391          102 YNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI  181 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  181 (313)
                           +++|+||||+|+..  ...+.+.|+..+++|+.+.++....+.+.+...      ......+++.........  
T Consensus        91 -----~~iDilin~Ag~g~--~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~~~--  155 (191)
T d1luaa1          91 -----KGAHFVFTAGAIGL--ELLPQAAWQNESSIEIVADYNAQPPLGIGGIDA------TDKGKEYGGKRAFGALGI--  155 (191)
T ss_dssp             -----TTCSEEEECCCTTC--CCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCT------TCEEEEETTEEEECHHHH--
T ss_pred             -----cCcCeeeecCcccc--ccCCHHHHHhhhcceeehhHhhHHHHHHHhhhh------ccCcEEecceEEEeccCc--
Confidence                 47999999999643  346788999999999888776654443332221      122333333332211110  


Q ss_pred             CCCCCCCCCCCCccccchHhHHHHHHHHH
Q 021391          182 RFDKINDESAYNSFGAYGQSKLANILHAK  210 (313)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~asK~a~~~l~~  210 (313)
                                  +...|.++|+++..+++
T Consensus       156 ------------g~~~y~~sk~a~~~l~~  172 (191)
T d1luaa1         156 ------------GGLKLKLHRACIAKLFE  172 (191)
T ss_dssp             ------------HHHHHHHHHHHHHHHTS
T ss_pred             ------------CcHHHHHHHHHHHHHHh
Confidence                        23469999999887664

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.77  E-value=1.1e-17  Score=150.70  Aligned_cols=228  Identities=15%  Similarity=0.117  Sum_probs=154.8

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      +..--.||+||||||+|.||.+++++|+++|++|+.+.|+.++.....+.............+..|+.+.+++..++.  
T Consensus         5 ~~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   82 (342)
T d1y1pa1           5 NAVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK--   82 (342)
T ss_dssp             TCSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT--
T ss_pred             CCCCCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc--
Confidence            344457999999999999999999999999999999999987766655444333334445667889999987766554  


Q ss_pred             hhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC-
Q 021391          103 NSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI-  181 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~-  181 (313)
                           .+|+++|+++....     .......+..|+.++.++++.+...        ..-.++|++||..+........ 
T Consensus        83 -----~~~~v~~~a~~~~~-----~~~~~~~~~~nv~gt~~ll~~~~~~--------~~v~~~i~~SS~~~~~~~~~~~~  144 (342)
T d1y1pa1          83 -----GAAGVAHIASVVSF-----SNKYDEVVTPAIGGTLNALRAAAAT--------PSVKRFVLTSSTVSALIPKPNVE  144 (342)
T ss_dssp             -----TCSEEEECCCCCSC-----CSCHHHHHHHHHHHHHHHHHHHHTC--------TTCCEEEEECCGGGTCCCCTTCC
T ss_pred             -----cchhhhhhcccccc-----cccccccccchhhhHHHHHHhhhcc--------cccccccccccceeeccCCCCCC
Confidence                 68999999986432     2334567788999999999887543        1235899999976543221111 


Q ss_pred             --CCC-------------CCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc---ch
Q 021391          182 --RFD-------------KINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN---GI  243 (313)
Q Consensus       182 --~~~-------------~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~---~~  243 (313)
                        ..+             .+.+..+..+...|+.+|.+.+.+++.++.+... +  +++.+++|+.+-.|.....   ..
T Consensus       145 ~~~~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~-~--~~~~~i~p~~v~Gp~~~~~~~~~~  221 (342)
T d1y1pa1         145 GIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-H--FTLNAVLPNYTIGTIFDPETQSGS  221 (342)
T ss_dssp             CCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-S--SEEEEEEESEEECCCSCTTTCCCH
T ss_pred             CccccccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhccc-c--cccceecccceeCCCCCccccccc
Confidence              000             1223334445668999999999999998887653 3  7788888988766543221   11


Q ss_pred             hHhHHHHHHH------------hhcCChHHHHHHHHHHHccC
Q 021391          244 LRGFCNTVGK------------LVLKNIPQGAATTCYVALHP  273 (313)
Q Consensus       244 ~~~~~~~~~~------------~~~~~~~eva~~~~~l~~~~  273 (313)
                      ...+...+..            .....+.|+|++++..+.++
T Consensus       222 ~~~~~~~l~~g~~~~~~~~~~~~~~v~v~Dva~~~i~~l~~~  263 (342)
T d1y1pa1         222 TSGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLP  263 (342)
T ss_dssp             HHHHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCT
T ss_pred             hHHHHHHHHcCCcCcccCCccceeeeeHHHHHHHHHHhhcCc
Confidence            1122211111            11456789999988887644

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.76  E-value=5.9e-17  Score=148.40  Aligned_cols=190  Identities=14%  Similarity=0.106  Sum_probs=131.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc----------------hhHHHHHHHHHHhCCCCceEEEEccCCCH
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM----------------AAGKDVREAIVKEIPSAKVDAMELDVSSL   92 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~----------------~~~~~~~~~l~~~~~~~~~~~~~~D~s~~   92 (313)
                      ||+||||||+|.||.+++++|+++|++|+++|.-.                ....+......... +.++.++.+|++|.
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~Dl~d~   79 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT-GKSIELYVGDICDF   79 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH-CCCCEEEESCTTSH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhc-CCCcEEEEccCCCH
Confidence            79999999999999999999999999999987211                11112222222211 45789999999999


Q ss_pred             HHHHHHHHHHhhcCCCeeEEEEcccCCCCCC-ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCc
Q 021391           93 ASVRKFASEYNSQGRPLNILINNAGIMASPF-MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSE  171 (313)
Q Consensus        93 ~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~  171 (313)
                      +.++.+++..     ++|+|+|.|+...... ....+.....+.+|+.|+.++++.+...-.        ...+++.||.
T Consensus        80 ~~l~~~~~~~-----~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~--------~~~~i~~ss~  146 (393)
T d1i24a_          80 EFLAESFKSF-----EPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGE--------ECHLVKLGTM  146 (393)
T ss_dssp             HHHHHHHHHH-----CCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCT--------TCEEEEECCG
T ss_pred             HHHHHHHHhh-----cchheeccccccccccccccccccccccccccccccHHHHHHHHhcc--------ccceeecccc
Confidence            9999999976     7999999998754433 334455677899999999999998875532        3356666665


Q ss_pred             cccccccCCCCC--CCC-------CCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCC
Q 021391          172 AHRFAYSEGIRF--DKI-------NDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNL  237 (313)
Q Consensus       172 ~~~~~~~~~~~~--~~~-------~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~  237 (313)
                      ..........+.  ...       +.+.+..+...|+.+|.+.+.+++.++.++.     +.+.++.|+.+-.+.
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~-----l~~~~lR~~~v~G~~  216 (393)
T d1i24a_         147 GEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWG-----IRATDLNQGVVYGVK  216 (393)
T ss_dssp             GGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CEEEEEEECEEECSC
T ss_pred             ccccccccccccccccccccccccccccccccccHHHHHhhhhcccccccccccc-----eeeeecccccccCCC
Confidence            543221111000  000       0112334556799999999999988877664     777888888776543

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.75  E-value=5.5e-18  Score=152.89  Aligned_cols=183  Identities=21%  Similarity=0.152  Sum_probs=132.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchh-HHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAA-GKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      |+||||||+|.||++++++|+++|++|+++++-... .......-...  ..++.++.+|++|.++++.+++..     +
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~~~-----~   74 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT--KHHIPFYEVDLCDRKGLEKVFKEY-----K   74 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH--TSCCCEEECCTTCHHHHHHHHHHS-----C
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhc--ccCCeEEEeecCCHHHHHHHHhcc-----C
Confidence            789999999999999999999999999999863322 12111111111  457889999999999999888764     7


Q ss_pred             eeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCC
Q 021391          109 LNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIND  188 (313)
Q Consensus       109 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~  188 (313)
                      +|+|||+|+.....  ...+....++.+|+.+..++++++...-         -.++|++||.......+.......+++
T Consensus        75 ~d~VihlAa~~~~~--~~~~~~~~~~~~N~~~t~~ll~~~~~~~---------i~~~i~~SS~~vyg~~~~~~~~~~~~e  143 (347)
T d1z45a2          75 IDSVIHFAGLKAVG--ESTQIPLRYYHNNILGTVVLLELMQQYN---------VSKFVFSSSATVYGDATRFPNMIPIPE  143 (347)
T ss_dssp             CCEEEECCSCCCHH--HHHHSHHHHHHHHHHHHHHHHHHHHHHT---------CCEEEEEEEGGGGCCGGGSTTCCSBCT
T ss_pred             CCEEEEcccccccc--ccccCcccccccchhhhHHHHHHHHhcc---------cceEEeecceeeecCcccCCCCCcccc
Confidence            99999999965322  2234556778899999999999986542         238999999887654443333344556


Q ss_pred             CCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCccc
Q 021391          189 ESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSI  233 (313)
Q Consensus       189 ~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v  233 (313)
                      ..+..+...|+.+|.+.+.+++.+...... +  +.+..+.|+.+
T Consensus       144 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~-~--~~~~~lR~~~v  185 (347)
T d1z45a2         144 ECPLGPTNPYGHTKYAIENILNDLYNSDKK-S--WKFAILRYFNP  185 (347)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHSTT-S--CEEEEEEECEE
T ss_pred             ccCCCCCChhHhHHHHHHHHHHHHHHhhcc-C--CcEEEEeecce
Confidence            666777788999999999988887765433 2  45555555433

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.75  E-value=5.4e-18  Score=154.08  Aligned_cols=230  Identities=12%  Similarity=0.071  Sum_probs=155.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEE-EEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVI-MAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~-l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      ++||||||+|.||++++++|++.|++|+ ++++......  ...+.......++.++.+|++|.+.++.+++..     .
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~   73 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN--LESLSDISESNRYNFEHADICDSAEITRIFEQY-----Q   73 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCC--GGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcccc--HHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhC-----C
Confidence            4699999999999999999999999754 4554221110  011111122457999999999999999998876     7


Q ss_pred             eeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC------C
Q 021391          109 LNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI------R  182 (313)
Q Consensus       109 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~------~  182 (313)
                      +|+|||+|+....  ..+.++...++++|+.+..++++.+...............++|++||...........      .
T Consensus        74 ~d~VihlAa~~~~--~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~  151 (361)
T d1kewa_          74 PDAVMHLAAESHV--DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVT  151 (361)
T ss_dssp             CSEEEECCSCCCH--HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSC
T ss_pred             CCEEEECccccch--hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccC
Confidence            9999999986432  2234566778999999999999999887543100001135899999977654332111      0


Q ss_pred             CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHh--------
Q 021391          183 FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKL--------  254 (313)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~--------  254 (313)
                      .....+.....+...|+.||.+.+.+++.++..++     +.+..+.|+.+-.|......+...+.......        
T Consensus       152 ~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~-----i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~  226 (361)
T d1kewa_         152 LPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYG-----LPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGK  226 (361)
T ss_dssp             CCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETT
T ss_pred             CCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-----CCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCC
Confidence            01112344556677899999999999999987663     77788899888777544333333333322211        


Q ss_pred             -----hcCChHHHHHHHHHHHccC
Q 021391          255 -----VLKNIPQGAATTCYVALHP  273 (313)
Q Consensus       255 -----~~~~~~eva~~~~~l~~~~  273 (313)
                           -+...+|+|+++..++.++
T Consensus       227 g~~~r~~i~v~D~a~ai~~~~~~~  250 (361)
T d1kewa_         227 GDQIRDWLYVEDHARALHMVVTEG  250 (361)
T ss_dssp             SCCEEEEEEHHHHHHHHHHHHHHC
T ss_pred             CCeEEeCEEHHHHHHHHHHHHhcC
Confidence                 1246899999999999754

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.75  E-value=1.2e-17  Score=150.15  Aligned_cols=183  Identities=19%  Similarity=0.125  Sum_probs=132.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      ++||||||+|.||+++++.|+++|++|++++|-..........+... ...++.++++|++|.+.+.++++..     ++
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~   74 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERL-GGKHPTFVEGDIRNEALMTEILHDH-----AI   74 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHH-HTSCCEEEECCTTCHHHHHHHHHHT-----TC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhh-cCCCCEEEEeecCCHHHHHHHHhcc-----CC
Confidence            46999999999999999999999999999987433222222222111 1457999999999999998888864     79


Q ss_pred             eEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCC
Q 021391          110 NILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDE  189 (313)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~  189 (313)
                      |+|||+|+....  ..+.++....+++|+.++.++++++...-         -.++|++||.+...+.+.   ....++.
T Consensus        75 d~ViHlAa~~~~--~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~---------v~~~i~~Ss~~vy~~~~~---~~~~e~~  140 (338)
T d1udca_          75 DTVIHFAGLKAV--GESVQKPLEYYDNNVNGTLRLISAMRAAN---------VKNFIFSSSATVYGDQPK---IPYVESF  140 (338)
T ss_dssp             SEEEECCSCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHHHHT---------CCEEEEEEEGGGGCSCCS---SSBCTTS
T ss_pred             CEEEECCCccch--hhHHhCHHHHHHhHHHHHHHHHHHHHHhC---------CCEEEecCcceEEccccc---ccccccc
Confidence            999999986422  22344566889999999999999887653         238899888776543331   1122233


Q ss_pred             CCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccC
Q 021391          190 SAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTN  236 (313)
Q Consensus       190 ~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~  236 (313)
                      ....+...|+.+|.+.+.+++..+.+..  +  +.+..+.|+.+-++
T Consensus       141 ~~~~p~~~Y~~sK~~~e~~~~~~~~~~~--~--~~~~ilR~~~v~G~  183 (338)
T d1udca_         141 PTGTPQSPYGKSKLMVEQILTDLQKAQP--D--WSIALLRYFNPVGA  183 (338)
T ss_dssp             CCCCCSSHHHHHHHHHHHHHHHHHHHST--T--CEEEEEEECEEECC
T ss_pred             ccCCCcchHHHHHhhhhHHHHHHHhhcc--C--CeEEEEeeccEEec
Confidence            3455677899999999999888776654  3  66667777766554

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.74  E-value=6.7e-17  Score=143.71  Aligned_cols=218  Identities=14%  Similarity=0.059  Sum_probs=150.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhH-HHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAG-KDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      |+||||||||.||++++++|+++|++|+.++|..... ....+.+   ....++.++.+|++|.+++..++...     .
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   72 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLREL---GIEGDIQYEDGDMADACSVQRAVIKA-----Q   72 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHT---TCGGGEEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHh---cccCCcEEEEccccChHHhhhhhccc-----c
Confidence            7999999999999999999999999999999865321 1112222   12347899999999999999888876     6


Q ss_pred             eeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCC
Q 021391          109 LNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIND  188 (313)
Q Consensus       109 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~  188 (313)
                      .++++|+++....  ....+.....+..|+.++.+++.++...-.        ..++++.|| ....+..   .....++
T Consensus        73 ~~~~~~~a~~~~~--~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~--------~~~~i~~Ss-~~~~~~~---~~~~~~E  138 (321)
T d1rpna_          73 PQEVYNLAAQSFV--GASWNQPVTTGVVDGLGVTHLLEAIRQFSP--------ETRFYQAST-SEMFGLI---QAERQDE  138 (321)
T ss_dssp             CSEEEECCSCCCH--HHHTTSHHHHHHHHTHHHHHHHHHHHHHCT--------TSEEEEEEE-GGGGCSC---SSSSBCT
T ss_pred             ccccccccccccc--cccccchHHHHhhhhhchHHHHHHHHHhCC--------Ccccccccc-hhhcCcc---cCCCCCC
Confidence            7888888875432  223455678899999999999998865432        234555554 4444433   2223445


Q ss_pred             CCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhH---HHHHHH------------
Q 021391          189 ESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGF---CNTVGK------------  253 (313)
Q Consensus       189 ~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~---~~~~~~------------  253 (313)
                      ..+..+...|+.+|.+.+.+++.+..++.     +.+..+.|+.+-.|..........+   ......            
T Consensus       139 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-----~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~  213 (321)
T d1rpna_         139 NTPFYPRSPYGVAKLYGHWITVNYRESFG-----LHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVD  213 (321)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTT
T ss_pred             CCCccccChhHHHHHHHHHHHHHHHhhcC-----CcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCC
Confidence            66777888999999999999998887764     6667777877666654332211111   111110            


Q ss_pred             --hhcCChHHHHHHHHHHHccCC
Q 021391          254 --LVLKNIPQGAATTCYVALHPQ  274 (313)
Q Consensus       254 --~~~~~~~eva~~~~~l~~~~~  274 (313)
                        .-+...+|+|++++.++.++.
T Consensus       214 ~~r~~i~v~D~~~~~~~~~~~~~  236 (321)
T d1rpna_         214 AKRDWGFAGDYVEAMWLMLQQDK  236 (321)
T ss_dssp             CEEECEEHHHHHHHHHHHHHSSS
T ss_pred             eEEccEEeHHHHHHHHHHHhcCC
Confidence              013568899999999987553

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=5.9e-17  Score=145.64  Aligned_cols=221  Identities=12%  Similarity=0.007  Sum_probs=149.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCch-----hHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMA-----AGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~-----~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      |+||||||+|.||++++++|.++|++|+.++|...     ..+........ ....++.++.+|++|.+.+..+++..  
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~--   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQA-HIEGNMKLHYGDLTDSTCLVKIINEV--   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhh-hccCCcEEEEeecCCchhhHHHHhhc--
Confidence            44599999999999999999999999999998542     12222111111 11347899999999999999999876  


Q ss_pred             cCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCC
Q 021391          105 QGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFD  184 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  184 (313)
                         .+++++|+++....  ....+.....+++|+.++.++++++......      +..++|++||.+.+ +.+.   ..
T Consensus        79 ---~~~~v~~~~a~~~~--~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~------~~~~~i~~SS~~vy-g~~~---~~  143 (347)
T d1t2aa_          79 ---KPTEIYNLGAQSHV--KISFDLAEYTADVDGVGTLRLLDAVKTCGLI------NSVKFYQASTSELY-GKVQ---EI  143 (347)
T ss_dssp             ---CCSEEEECCSCCCH--HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT------TTCEEEEEEEGGGT-CSCS---SS
T ss_pred             ---ccceeeeeeecccc--chhhccchhhhhhHHHHHHHHHHHHHHcCCC------CCcEEEEecchhee-cCCC---CC
Confidence               78899999876422  2334556667899999999999888655322      13478999886543 3221   12


Q ss_pred             CCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHh----HHHHHHH-------
Q 021391          185 KINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRG----FCNTVGK-------  253 (313)
Q Consensus       185 ~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~----~~~~~~~-------  253 (313)
                      .+++..++++...|+.||.+.|.+++.++..+.     +.+..+.|+.+-.|..........    +......       
T Consensus       144 ~~~E~~~~~P~~~Yg~sK~~aE~~~~~~~~~~~-----~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~  218 (347)
T d1t2aa_         144 PQKETTPFYPRSPYGAAKLYAYWIVVNFREAYN-----LFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSL  218 (347)
T ss_dssp             SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEE
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-----CCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeec
Confidence            344556667778899999999999998887654     666677887766654332211111    1111100       


Q ss_pred             ------hhcCChHHHHHHHHHHHccC
Q 021391          254 ------LVLKNIPQGAATTCYVALHP  273 (313)
Q Consensus       254 ------~~~~~~~eva~~~~~l~~~~  273 (313)
                            ......+|+++++..++.++
T Consensus       219 g~g~~~r~~i~v~D~~~a~~~~~~~~  244 (347)
T d1t2aa_         219 GNLDAKRDWGHAKDYVEAMWLMLQND  244 (347)
T ss_dssp             SCTTCEECCEEHHHHHHHHHHHHHSS
T ss_pred             CCCcceeeeeEecHHHHHHHHHhhcC
Confidence                  11346789999999998754

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.73  E-value=1.5e-16  Score=142.32  Aligned_cols=224  Identities=12%  Similarity=0.004  Sum_probs=152.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCch-----hHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMA-----AGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~-----~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .|+||||||||.||+++++.|+++|++|+.++|...     +.......... .....+.++.+|+++.+++...++.. 
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Di~~~~~~~~~~~~~-   78 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHN-VNKALMKLHYADLTDASSLRRWIDVI-   78 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC---------CCEEEEECCTTCHHHHHHHHHHH-
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhh-ccccceEEEEccccCHHHHHHHHhhh-
Confidence            389999999999999999999999999999998532     22211111111 11346889999999999999988865 


Q ss_pred             hcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          104 SQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                          ++|+|+|+|+....  ....+.....+..|+.+...++.++.....+.    ....+++..||.......     .
T Consensus        79 ----~~D~Vih~Aa~~~~--~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~----~~~~~~~~~ss~~~~~~~-----~  143 (339)
T d1n7ha_          79 ----KPDEVYNLAAQSHV--AVSFEIPDYTADVVATGALRLLEAVRSHTIDS----GRTVKYYQAGSSEMFGST-----P  143 (339)
T ss_dssp             ----CCSEEEECCSCCCH--HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHH----CCCCEEEEEEEGGGGTTS-----C
T ss_pred             ----ccchhhhccccccc--cccccCccccccccccccchhhhhhhhccccc----ccceeeeecccceecccC-----C
Confidence                89999999986432  22345667788999999999999988766552    123345555444332221     2


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHH---HHHHh------
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCN---TVGKL------  254 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~---~~~~~------  254 (313)
                      ...++..+..+...|+.+|.+.+.++..++..++     +.+..+.|+.+-.|..........+..   .....      
T Consensus       144 ~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-----~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~  218 (339)
T d1n7ha_         144 PPQSETTPFHPRSPYAASKCAAHWYTVNYREAYG-----LFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLF  218 (339)
T ss_dssp             SSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEE
T ss_pred             CCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHhC-----CCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEE
Confidence            2344556667788999999999999988887653     788889998887765443221111111   11000      


Q ss_pred             --------hcCChHHHHHHHHHHHccCC
Q 021391          255 --------VLKNIPQGAATTCYVALHPQ  274 (313)
Q Consensus       255 --------~~~~~~eva~~~~~l~~~~~  274 (313)
                              -....+|+|+++..++.++.
T Consensus       219 ~g~~~~~rd~~~v~D~a~~~~~~~~~~~  246 (339)
T d1n7ha_         219 LGNLQASRDWGFAGDYVEAMWLMLQQEK  246 (339)
T ss_dssp             ESCTTCEEECEEHHHHHHHHHHHHTSSS
T ss_pred             eCCCCccccceeeehHHHHHHHHHhcCC
Confidence                    13457899999999987543

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=5.6e-17  Score=135.61  Aligned_cols=192  Identities=14%  Similarity=0.041  Sum_probs=126.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      |..|+|+||||||+||++++++|+++|++|.++.|+.+++...        ...++.++.+|++|.+++.++++      
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~--------~~~~~~~~~gD~~d~~~l~~al~------   66 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE--------GPRPAHVVVGDVLQAADVDKTVA------   66 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS--------SCCCSEEEESCTTSHHHHHHHHT------
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc--------cccccccccccccchhhHHHHhc------
Confidence            4678999999999999999999999999999999998774422        13468899999999999877766      


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                       +.|+|||++|.....   ..      .+++..+..++++++    +++     .-.++|++||.......+        
T Consensus        67 -~~d~vi~~~g~~~~~---~~------~~~~~~~~~~l~~aa----~~~-----~v~r~i~~ss~~~~~~~~--------  119 (205)
T d1hdoa_          67 -GQDAVIVLLGTRNDL---SP------TTVMSEGARNIVAAM----KAH-----GVDKVVACTSAFLLWDPT--------  119 (205)
T ss_dssp             -TCSEEEECCCCTTCC---SC------CCHHHHHHHHHHHHH----HHH-----TCCEEEEECCGGGTSCTT--------
T ss_pred             -CCCEEEEEeccCCch---hh------hhhhHHHHHHHHHHH----Hhc-----CCCeEEEEeeeeccCCCc--------
Confidence             689999999864321   11      124444555555544    442     245899999876543211        


Q ss_pred             CCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcc-ccchhHhHHHHHHHhhcCChHHHHHH
Q 021391          187 NDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFR-YNGILRGFCNTVGKLVLKNIPQGAAT  265 (313)
Q Consensus       187 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~eva~~  265 (313)
                         ...+....|...|.+.+.+       +...|  ++...|.||.+...... .......   ........+.+|+|+.
T Consensus       120 ---~~~~~~~~~~~~~~~~e~~-------l~~~~--~~~tiirp~~~~~~~~~~~~~~~~~---~~~~~~~i~~~DvA~~  184 (205)
T d1hdoa_         120 ---KVPPRLQAVTDDHIRMHKV-------LRESG--LKYVAVMPPHIGDQPLTGAYTVTLD---GRGPSRVISKHDLGHF  184 (205)
T ss_dssp             ---CSCGGGHHHHHHHHHHHHH-------HHHTC--SEEEEECCSEEECCCCCSCCEEESS---SCSSCSEEEHHHHHHH
T ss_pred             ---cccccccccchHHHHHHHH-------HHhcC--CceEEEecceecCCCCcccEEEeeC---CCCCCCcCCHHHHHHH
Confidence               1111233556666655543       33467  89999999987533222 1110000   0012234678999999


Q ss_pred             HHHHHccCC
Q 021391          266 TCYVALHPQ  274 (313)
Q Consensus       266 ~~~l~~~~~  274 (313)
                      ++..+.++.
T Consensus       185 ~~~~l~~~~  193 (205)
T d1hdoa_         185 MLRCLTTDE  193 (205)
T ss_dssp             HHHTTSCST
T ss_pred             HHHHhCCCC
Confidence            999997543

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.67  E-value=1.7e-15  Score=135.95  Aligned_cols=220  Identities=11%  Similarity=0.047  Sum_probs=149.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhC---CCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEI---PSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~---~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .+-|++|||||||.||++++++|.++|++|+.++|....-....+.+....   ....+.++.+|+.|.........   
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~---   90 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA---   90 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT---
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc---
Confidence            455899999999999999999999999999999873322122121221111   12368899999999887655443   


Q ss_pred             hcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          104 SQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                          ..+.++|.+.....  ..+.++....+++|+.++.++++++...-         ..++|++||.......+.    
T Consensus        91 ----~~~~v~~~~a~~~~--~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~---------~~~~i~~SS~~vyg~~~~----  151 (341)
T d1sb8a_          91 ----GVDYVLHQAALGSV--PRSINDPITSNATNIDGFLNMLIAARDAK---------VQSFTYAASSSTYGDHPG----  151 (341)
T ss_dssp             ----TCSEEEECCSCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHTT---------CSEEEEEEEGGGGTTCCC----
T ss_pred             ----cccccccccccccc--cccccCccchhheeehhHHHHHHHHHhcC---------CceEEEcccceeeCCCCC----
Confidence                67888888865422  22456778889999999999999886431         348999998876543221    


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc----chhHhHHHHHHHh-----
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN----GILRGFCNTVGKL-----  254 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~~~-----  254 (313)
                      ...+++.+.++...|+.+|.+.+.+++.++...+     +++..+.|+.+-++.....    .....+.......     
T Consensus       152 ~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-----i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~  226 (341)
T d1sb8a_         152 LPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYG-----FSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYI  226 (341)
T ss_dssp             SSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEE
T ss_pred             CCccCCCCCCCCCcchHHHHHHHHHHHHHHHHhC-----CCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEE
Confidence            2244556667788999999999999999887664     6667788887765543322    1222222222111     


Q ss_pred             --------hcCChHHHHHHHHHHHccC
Q 021391          255 --------VLKNIPQGAATTCYVALHP  273 (313)
Q Consensus       255 --------~~~~~~eva~~~~~l~~~~  273 (313)
                              ....++|++.++..++..+
T Consensus       227 ~g~g~~~r~~i~v~D~~~a~~~~~~~~  253 (341)
T d1sb8a_         227 NGDGETSRDFCYIENTVQANLLAATAG  253 (341)
T ss_dssp             ESSSCCEECCEEHHHHHHHHHHHHTCC
T ss_pred             cCCCCEEEEEEEEeccchhhhhhhhcc
Confidence                    1234578999988887643

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.67  E-value=2.1e-15  Score=135.21  Aligned_cols=225  Identities=11%  Similarity=0.012  Sum_probs=149.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC-CEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           30 LTAIVTGASSGIGTETARVLALRG-VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      ++||||||+|.||++++++|+++| ++|+++++..+......       ...++.++.+|+++.+++.+.+.+      .
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~-------~~~~~~~i~~Di~~~~~~~~~~~~------~   67 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDISIHSEWIEYHVK------K   67 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-------TCTTEEEEECCTTTCSHHHHHHHH------H
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc-------cCCCeEEEECccCChHHHHHHHHh------C
Confidence            369999999999999999999999 48999988655433222       145799999999998776553332      5


Q ss_pred             eeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC---CC
Q 021391          109 LNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF---DK  185 (313)
Q Consensus       109 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~---~~  185 (313)
                      +|+|||+|+.....  ...+.....+.+|+.+..++++++...          +.+.+++||.......+.....   ..
T Consensus        68 ~d~Vih~a~~~~~~--~~~~~~~~~~~~nv~gt~~ll~~~~~~----------~~~~~~~ss~~~~~~~~~~~~~~~~~~  135 (342)
T d2blla1          68 CDVVLPLVAIATPI--EYTRNPLRVFELDFEENLRIIRYCVKY----------RKRIIFPSTSEVYGMCSDKYFDEDHSN  135 (342)
T ss_dssp             CSEEEECBCCCCHH--HHHHSHHHHHHHHTHHHHHHHHHHHHT----------TCEEEEECCGGGGBTCCCSSBCTTTCC
T ss_pred             CCcccccccccccc--ccccCCccccccccccccccccccccc----------ccccccccccccccccccccccccccc
Confidence            89999999975432  223445678999999999999997432          3467777776655443321111   11


Q ss_pred             CCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--------chhHhHHHHHHH----
Q 021391          186 INDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--------GILRGFCNTVGK----  253 (313)
Q Consensus       186 ~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--------~~~~~~~~~~~~----  253 (313)
                      ........+...|+.||.+.+.+++.++..++     +.+..+.|..+-.+.....        .....+......    
T Consensus       136 ~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-----~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  210 (342)
T d2blla1         136 LIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEG-----LQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPI  210 (342)
T ss_dssp             CBCCCTTCGGGHHHHHHHHHHHHHHHHHHHHC-----CCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCE
T ss_pred             ccccccCCCcchhhhcccchhhhhhhhhcccC-----ceeEEeeccccccccccccccccccccccchHHHHHHHhCCCc
Confidence            11222334567899999999999999888764     6667777776655432221        112222222111    


Q ss_pred             ---------hhcCChHHHHHHHHHHHccCCccCCCceeecC
Q 021391          254 ---------LVLKNIPQGAATTCYVALHPQVQGVSGEYFSD  285 (313)
Q Consensus       254 ---------~~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~  285 (313)
                               .-....+|+++++..++.++. ....|+.++.
T Consensus       211 ~~~~~g~~~r~~i~v~D~~~a~~~~~~~~~-~~~~g~~~Ni  250 (342)
T d2blla1         211 KLIDGGKQKRCFTDIRDGIEALYRIIENAG-NRCDGEIINI  250 (342)
T ss_dssp             EEGGGSCCEEECEEHHHHHHHHHHHHHCGG-GTTTTEEEEE
T ss_pred             cccCCCCeeeeecccccccceeeeehhhcc-ccCCCeEEEE
Confidence                     114578999999999997432 3344666654

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.66  E-value=6.2e-16  Score=139.19  Aligned_cols=218  Identities=17%  Similarity=0.112  Sum_probs=146.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc---hhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM---AAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      -|.||||||||.||++++++|+++|+.|.+++++.   .......    ....+.++.++.+|++|.+.+..+++     
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~----~~~~~~~i~~~~~Di~d~~~~~~~~~-----   72 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANL----EAILGDRVELVVGDIADAELVDKLAA-----   72 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGT----GGGCSSSEEEEECCTTCHHHHHHHHT-----
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHH----HHhhcCCeEEEEccCCCHHHHHHHHh-----
Confidence            47899999999999999999999998655554421   1100000    11124589999999999999888765     


Q ss_pred             CCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC-----
Q 021391          106 GRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG-----  180 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~-----  180 (313)
                        ..|.++|.|+.....  ....+....+++|+.+..+++..+...          +.++|++||.......+..     
T Consensus        73 --~~~~v~~~a~~~~~~--~~~~~~~~~~~~N~~g~~nll~~~~~~----------~~k~i~~ss~~vyg~~~~~~~~~~  138 (346)
T d1oc2a_          73 --KADAIVHYAAESHND--NSLNDPSPFIHTNFIGTYTLLEAARKY----------DIRFHHVSTDEVYGDLPLREDLPG  138 (346)
T ss_dssp             --TCSEEEECCSCCCHH--HHHHCCHHHHHHHTHHHHHHHHHHHHH----------TCEEEEEEEGGGGCCBCCGGGSTT
T ss_pred             --hhhhhhhhhhccccc--chhhCcccceeeehHhHHhhhhhhccc----------cccccccccceEecccCccccccc
Confidence              578899999765332  223456678999999999999877443          3477888776554322211     


Q ss_pred             ---CCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHh---
Q 021391          181 ---IRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKL---  254 (313)
Q Consensus       181 ---~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~---  254 (313)
                         ....+..+.....+...|+.+|.+.+.+++.+..++   |  +++.++.|+.+-.|..................   
T Consensus       139 ~~~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~---~--i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~  213 (346)
T d1oc2a_         139 HGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---G--VKATISNCSNNYGPYQHIEKFIPRQITNILAGIKP  213 (346)
T ss_dssp             TTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCC
T ss_pred             cccCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc---C--CCEEEEeecceeCCCCCccchhHHHHHHHHcCCce
Confidence               112334455566677889999999999999888776   4  88899999988776543322222222211111   


Q ss_pred             ----------hcCChHHHHHHHHHHHccCC
Q 021391          255 ----------VLKNIPQGAATTCYVALHPQ  274 (313)
Q Consensus       255 ----------~~~~~~eva~~~~~l~~~~~  274 (313)
                                .....+|+|++++.++.++.
T Consensus       214 ~i~~~g~~~r~~i~v~D~a~a~~~~~~~~~  243 (346)
T d1oc2a_         214 KLYGEGKNVRDWIHTNDHSTGVWAILTKGR  243 (346)
T ss_dssp             EEETTSCCEEECEEHHHHHHHHHHHHHHCC
T ss_pred             eEeCCCCccccccchhhHHHHHHHHHhhcc
Confidence                      13457799999888876443

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.66  E-value=1.3e-15  Score=136.97  Aligned_cols=188  Identities=16%  Similarity=0.136  Sum_probs=137.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      ++||+||||||||.||.++++.|+++|++|+.++|+........+....   ...+.++.+|++|++.+.++++..    
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~---~~~i~~~~~Dl~d~~~l~~~~~~~----   78 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV---ADGMQSEIGDIRDQNKLLESIREF----   78 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTT---TTTSEEEECCTTCHHHHHHHHHHH----
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhc---ccCCeEEEeeccChHhhhhhhhhc----
Confidence            6899999999999999999999999999999999987654443332211   346899999999999999988876    


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                       .+|+++|+++....  ..+.+..+..+.+|+.+..++++++...-        ....+++.||.. ....+.  .....
T Consensus        79 -~~~~v~~~aa~~~~--~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~--------~~~~~~~~s~~~-~~~~~~--~~~~~  144 (356)
T d1rkxa_          79 -QPEIVFHMAAQPLV--RLSYSEPVETYSTNVMGTVYLLEAIRHVG--------GVKAVVNITSDK-CYDNKE--WIWGY  144 (356)
T ss_dssp             -CCSEEEECCSCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEECCGG-GBCCCC--SSSCB
T ss_pred             -hhhhhhhhhccccc--cccccCCccccccccccchhhhhhhhccc--------cccccccccccc-cccccc--ccccc
Confidence             79999999986422  23345677889999999999999887542        123444444443 333221  12223


Q ss_pred             CCCCCCCccccchHhHHHHHHHHHHHHHHhcc------CCCcEEEEEeeCcccccCC
Q 021391          187 NDESAYNSFGAYGQSKLANILHAKELAKHLKE------DGVNITANSLHPGSIVTNL  237 (313)
Q Consensus       187 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~------~g~~I~vn~i~PG~v~t~~  237 (313)
                      ++...+.+...|+.+|.+.+.+++.++.++..      .+  +.+..+.|+.+-.|.
T Consensus       145 ~~~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~--~~~~~~r~~~vyGp~  199 (356)
T d1rkxa_         145 RENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHG--TAVATVRAGNVIGGG  199 (356)
T ss_dssp             CTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHC--CEEEEEECCCEECTT
T ss_pred             ccccccCCCCccccccccchhhhhHHhhhcccchhccccC--ceEEeccCCCeeCCC
Confidence            33445556678999999999999998887642      34  677888888776543

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=1.4e-15  Score=135.10  Aligned_cols=211  Identities=13%  Similarity=0.063  Sum_probs=141.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      .|+||||||+|.||++++++|+++|++|+.+++......+....   .....++.....|+.+.            .+.+
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~------------~~~~   65 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEH---WIGHENFELINHDVVEP------------LYIE   65 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGG---GTTCTTEEEEECCTTSC------------CCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHH---hcCCCceEEEehHHHHH------------HHcC
Confidence            38899999999999999999999999999998733221111111   11133456666665432            2336


Q ss_pred             eeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCC--CCCCC
Q 021391          109 LNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGI--RFDKI  186 (313)
Q Consensus       109 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~--~~~~~  186 (313)
                      +|+|||+|+.....  ...++..+.+++|+.+..++++++...          +.++|++||.+.... +...  +.+..
T Consensus        66 ~d~VihlAa~~~~~--~~~~~~~~~~~~Nv~g~~~ll~~~~~~----------~~k~I~~SS~~vy~~-~~~~~~~e~~~  132 (312)
T d2b69a1          66 VDQIYHLASPASPP--NYMYNPIKTLKTNTIGTLNMLGLAKRV----------GARLLLASTSEVYGD-PEVHPQSEDYW  132 (312)
T ss_dssp             CSEEEECCSCCSHH--HHTTCHHHHHHHHHHHHHHHHHHHHHH----------TCEEEEEEEGGGGBS-CSSSSBCTTCC
T ss_pred             CCEEEECcccCCch--hHHhCHHHHHHHHHHHHHHHHHHHHHc----------CCcEEEEEChheecC-CCCCCCCcccc
Confidence            99999999865321  223456778999999999999887532          348999998665432 2211  22233


Q ss_pred             CCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCcccc--chhHhHHHHHHHh----------
Q 021391          187 NDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYN--GILRGFCNTVGKL----------  254 (313)
Q Consensus       187 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~--~~~~~~~~~~~~~----------  254 (313)
                      .+..++.+...|+.||.+.+.+++.++.++   |  +.+..+.|+.+-.|.....  .+...+.......          
T Consensus       133 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~  207 (312)
T d2b69a1         133 GHVNPIGPRACYDEGKRVAETMCYAYMKQE---G--VEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGS  207 (312)
T ss_dssp             CBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSC
T ss_pred             CCCCCCCCccHHHHHHHHHHHHHHHHHHHh---C--CcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCC
Confidence            344566777889999999999999988876   4  7788899998877654322  2223332222111          


Q ss_pred             ---hcCChHHHHHHHHHHHcc
Q 021391          255 ---VLKNIPQGAATTCYVALH  272 (313)
Q Consensus       255 ---~~~~~~eva~~~~~l~~~  272 (313)
                         -+...+|++++++.++..
T Consensus       208 ~~r~~i~v~D~~~~~~~~~~~  228 (312)
T d2b69a1         208 QTRAFQYVSDLVNGLVALMNS  228 (312)
T ss_dssp             CEEECEEHHHHHHHHHHHHTS
T ss_pred             eeEccEEHHHHHHHHHHHHhh
Confidence               123578999999888863

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.65  E-value=5e-15  Score=131.82  Aligned_cols=170  Identities=17%  Similarity=0.160  Sum_probs=123.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc-hhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           31 TAIVTGASSGIGTETARVLALRGVHVIMAVRNM-AAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      +||||||+|.||++++++|+++|++|+.+++-. ....+....+..   ..++.++.+|+++.+++..+++..     ++
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~---~~~~~~i~~Di~~~~~l~~~~~~~-----~~   73 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS---LGNFEFVHGDIRNKNDVTRLITKY-----MP   73 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT---TCCCEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhc---cCCcEEEEcccCCHHHHHHHHHhc-----CC
Confidence            689999999999999999999999999987522 222222333322   357899999999999999998876     78


Q ss_pred             eEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCC-------
Q 021391          110 NILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIR-------  182 (313)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~-------  182 (313)
                      |++||+|+....  ....++....+++|+.|+.++++++...-         ..+.|+.||.....+.+....       
T Consensus        74 d~Vih~aa~~~~--~~~~~~~~~~~~~Nv~gt~nll~~~~~~~---------~~~~i~~sS~~~~~~~~~~~~~~~~~~~  142 (338)
T d1orra_          74 DSCFHLAGQVAM--TTSIDNPCMDFEINVGGTLNLLEAVRQYN---------SNCNIIYSSTNKVYGDLEQYKYNETETR  142 (338)
T ss_dssp             SEEEECCCCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHHHHC---------TTCEEEEEEEGGGGTTCTTSCEEECSSC
T ss_pred             ceEEeecccccc--cccccChHHHHHHHHHHHHHHHHhhhccc---------cccccccccccccccccccccccccccc
Confidence            999999987533  22334667889999999999999876542         235666666655544332211       


Q ss_pred             ------CCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccC
Q 021391          183 ------FDKINDESAYNSFGAYGQSKLANILHAKELAKHLKED  219 (313)
Q Consensus       183 ------~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~  219 (313)
                            +...+....+.+...|+.+|...+.+....+..+...
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~~~  185 (338)
T d1orra_         143 YTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLN  185 (338)
T ss_dssp             EEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCE
T ss_pred             ccccccccCcccCCccccccccccccchhhhhhhhhhhccCcc
Confidence                  1222334555667889999999999999988888643

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.64  E-value=1.2e-15  Score=135.16  Aligned_cols=168  Identities=13%  Similarity=0.109  Sum_probs=123.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      .|+||||||+|.||++++++|+++|+.|+++++..                      .+|+.+.+.+..+++..     .
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~----------------------~~~~~~~~~~~~~~~~~-----~   54 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSRAVHDFFASE-----R   54 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHHHHHHHHHHH-----C
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch----------------------hccccCHHHHHHHHhhc-----C
Confidence            47899999999999999999999999988775431                      26899999998887754     7


Q ss_pred             eeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCC-CCCCCCC
Q 021391          109 LNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEG-IRFDKIN  187 (313)
Q Consensus       109 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~-~~~~~~~  187 (313)
                      +|.++|+++.... ...........++.|+.++.++++++...-         -.++|++||.+.+.+.... .+.+...
T Consensus        55 ~d~v~~~a~~~~~-~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~---------v~~~i~~SS~~vyg~~~~~~~~E~~~~  124 (315)
T d1e6ua_          55 IDQVYLAAAKVGG-IVANNTYPADFIYQNMMIESNIIHAAHQND---------VNKLLFLGSSCIYPKLAKQPMAESELL  124 (315)
T ss_dssp             CSEEEECCCCCCC-HHHHHHCHHHHHHHHHHHHHHHHHHHHHTT---------CCEEEEECCGGGSCTTCCSSBCGGGTT
T ss_pred             CCEEEEcchhccc-cccchhhHHHHHHHHHHHHHHHHHHHHHcC---------CCEEEEECCceEcCCCCCCCccCCccc
Confidence            8999999976432 122344556678899999999998885542         2489999998876443211 1111222


Q ss_pred             CCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCc
Q 021391          188 DESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLF  238 (313)
Q Consensus       188 ~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~  238 (313)
                      +....++...|+.||.+.|.+++.+..+.   |  +++..+.|+.+-.|..
T Consensus       125 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--l~~~ilR~~~vyGp~~  170 (315)
T d1e6ua_         125 QGTLEPTNEPYAIAKIAGIKLCESYNRQY---G--RDYRSVMPTNLYGPHD  170 (315)
T ss_dssp             SSCCCGGGHHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEESTTC
T ss_pred             cCCCCCCCCHHHHHHHHHHHHHHHHHHHh---C--CCEEEEeeccEECCCC
Confidence            22333345579999999999999998766   4  8888999988876643

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=3.9e-15  Score=133.72  Aligned_cols=183  Identities=16%  Similarity=0.072  Sum_probs=124.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecC------chhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRN------MAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~------~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      |+||||||+|.||.+++++|+++|++|+++++.      ........+.+... ...++.++.+|++|.++++.++... 
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~l~~~~~~~-   80 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL-TGRSVEFEEMDILDQGALQRLFKKY-   80 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH-HTCCCEEEECCTTCHHHHHHHHHHC-
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHh-cCCCcEEEEeecccccccccccccc-
Confidence            789999999999999999999999999998741      11111122222211 1457899999999999998888763 


Q ss_pred             hcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          104 SQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                          .+++++|+|+....  ..+.+.....+++|+.+..++++++...-         -.+++++||..........   
T Consensus        81 ----~~~~i~h~Aa~~~~--~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~---------v~~~i~~ss~~~~~~~~~~---  142 (346)
T d1ek6a_          81 ----SFMAVIHFAGLKAV--GESVQKPLDYYRVNLTGTIQLLEIMKAHG---------VKNLVFSSSATVYGNPQYL---  142 (346)
T ss_dssp             ----CEEEEEECCSCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHHHTT---------CCEEEEEEEGGGGCSCSSS---
T ss_pred             ----ccccccccccccCc--HhhHhCHHHHHHhhhcccccccchhhhcC---------cccccccccceeeeccccc---
Confidence                78999999986532  22334456789999999999998875332         2378888776655432211   


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccC
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTN  236 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~  236 (313)
                      ..............|+.+|.+.+...+.++...  .+  +....+.|+.+-++
T Consensus       143 ~~~~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~~--~~--~~~~~lR~~~v~G~  191 (346)
T d1ek6a_         143 PLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQAD--KT--WNAVLLRYFNPTGA  191 (346)
T ss_dssp             SBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHC--TT--CEEEEEEECEEECC
T ss_pred             cccccccccccCChHHHHHHHHHHHHHHHHHhc--cC--CceEEEeecceecc
Confidence            111122222344579999999998888766532  23  56666777665443

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.63  E-value=2.1e-15  Score=134.34  Aligned_cols=215  Identities=14%  Similarity=0.078  Sum_probs=147.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEE------EEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHV------IMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V------~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      ++||||||+|.||+++++.|+++|+.|      +..++-......  ..+.......++.++..|.++.........   
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---   75 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR--ANLAPVDADPRLRFVHGDIRDAGLLARELR---   75 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG--GGGGGGTTCTTEEEEECCTTCHHHHHHHTT---
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccH--hHhhhhhcCCCeEEEEeccccchhhhcccc---
Confidence            469999999999999999999999754      444322111000  001111114579999999999987654433   


Q ss_pred             hcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCC
Q 021391          104 SQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRF  183 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  183 (313)
                          .+|+++|+|+....  ..........+++|+.++.++++++...         ...++|++||.+...+..    .
T Consensus        76 ----~~d~vi~~a~~~~~--~~~~~~~~~~~~~N~~gt~~ll~~~~~~---------~~~~~I~~Ss~~~yg~~~----~  136 (322)
T d1r6da_          76 ----GVDAIVHFAAESHV--DRSIAGASVFTETNVQGTQTLLQCAVDA---------GVGRVVHVSTNQVYGSID----S  136 (322)
T ss_dssp             ----TCCEEEECCSCCCH--HHHHHCCHHHHHHHTHHHHHHHHHHHHT---------TCCEEEEEEEGGGGCCCS----S
T ss_pred             ----ccceEEeecccccc--cccccchHHHhhhhHHHHHHHHHHHHHc---------CCceEEEeecceeecCCC----C
Confidence                78999999976432  2344566778899999999999988643         135899998876654332    2


Q ss_pred             CCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHh---------
Q 021391          184 DKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKL---------  254 (313)
Q Consensus       184 ~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~---------  254 (313)
                      ..+++..+..+...|+.+|.+.+.+++.++.+.+     +.+..+.|+.+-.|......+...+.......         
T Consensus       137 ~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-----~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g  211 (322)
T d1r6da_         137 GSWTESSPLEPNSPYAASKAGSDLVARAYHRTYG-----LDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDG  211 (322)
T ss_dssp             SCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTS
T ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-----CCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCC
Confidence            2345566677778899999999999999987763     78888999988776544333333333222111         


Q ss_pred             ----hcCChHHHHHHHHHHHccC
Q 021391          255 ----VLKNIPQGAATTCYVALHP  273 (313)
Q Consensus       255 ----~~~~~~eva~~~~~l~~~~  273 (313)
                          -+...+|+|+++..++.++
T Consensus       212 ~~~r~~i~v~D~a~ai~~~~~~~  234 (322)
T d1r6da_         212 ANVREWVHTDDHCRGIALVLAGG  234 (322)
T ss_dssp             CCEEEEEEHHHHHHHHHHHHHHC
T ss_pred             CeEEccEEHHHHHHHHHHHHhCC
Confidence                1347889999999999854

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.60  E-value=4.2e-15  Score=134.37  Aligned_cols=179  Identities=18%  Similarity=0.111  Sum_probs=129.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      ++++||||||+|.||++++++|.++|+.|+++++.......      ..  .....+..+|+.+.+.+..+++       
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~------~~--~~~~~~~~~D~~~~~~~~~~~~-------   78 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT------ED--MFCDEFHLVDLRVMENCLKVTE-------   78 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC------GG--GTCSEEEECCTTSHHHHHHHHT-------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh------hh--cccCcEEEeechhHHHHHHHhh-------
Confidence            56789999999999999999999999999999875432110      00  1245688899999887766554       


Q ss_pred             CeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCC--
Q 021391          108 PLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDK--  185 (313)
Q Consensus       108 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~--  185 (313)
                      .+|.+||+|+..... ....+.....+.+|+.++.+++.++...-         -.++|++||.......+.. ...+  
T Consensus        79 ~~d~Vih~a~~~~~~-~~~~~~~~~~~~~n~~gt~~ll~~~~~~~---------vk~~i~~SS~~~~~~~~~~-~~~~~~  147 (363)
T d2c5aa1          79 GVDHVFNLAADMGGM-GFIQSNHSVIMYNNTMISFNMIEAARING---------IKRFFYASSACIYPEFKQL-ETTNVS  147 (363)
T ss_dssp             TCSEEEECCCCCCCH-HHHTTCHHHHHHHHHHHHHHHHHHHHHTT---------CSEEEEEEEGGGSCGGGSS-SSSSCE
T ss_pred             cCCeEeecccccccc-cccccccccccccccchhhHHHHhHHhhC---------ccccccccccccccccccc-cccccc
Confidence            689999999865332 22345677788999999999999886543         2489999997765443321 1111  


Q ss_pred             --CCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCC
Q 021391          186 --INDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNL  237 (313)
Q Consensus       186 --~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~  237 (313)
                        ..+..+..+...|+.+|.+.+.+++.+..++   |  +.+..+.|+.+-.+.
T Consensus       148 ~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~---g--l~~~ilR~~~vyG~~  196 (363)
T d2c5aa1         148 LKESDAWPAEPQDAFGLEKLATEELCKHYNKDF---G--IECRIGRFHNIYGPF  196 (363)
T ss_dssp             ECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECCEECTT
T ss_pred             cccccCCcCCCCCHHHHHHHHHHHHHHHHHHHh---C--CCEEEEEeeeEeccC
Confidence              1122234456789999999999999888776   4  778888888876654

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.57  E-value=5e-14  Score=128.23  Aligned_cols=189  Identities=16%  Similarity=0.135  Sum_probs=132.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHH-cCCEEEEEec---------CchhHHHHHHHHHHh------CCCCceEEEEccCCCH
Q 021391           29 GLTAIVTGASSGIGTETARVLAL-RGVHVIMAVR---------NMAAGKDVREAIVKE------IPSAKVDAMELDVSSL   92 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~-~G~~V~l~~r---------~~~~~~~~~~~l~~~------~~~~~~~~~~~D~s~~   92 (313)
                      +++||||||+|.||++++++|++ .|++|+++++         ..+..++....+...      .......++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            57899999999999999999986 6899999874         122233333333321      1134688999999999


Q ss_pred             HHHHHHHHHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391           93 ASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus        93 ~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                      +.++++++..    .++|+|+|+|+.....  ...+.....+++|+.+..++++++....         ..++++++|..
T Consensus        82 ~~l~~~~~~~----~~~d~ViH~Aa~~~~~--~~~~~~~~~~~~N~~~t~~~l~~~~~~~---------~~~~~~~~s~~  146 (383)
T d1gy8a_          82 DFLNGVFTRH----GPIDAVVHMCAFLAVG--ESVRDPLKYYDNNVVGILRLLQAMLLHK---------CDKIIFSSSAA  146 (383)
T ss_dssp             HHHHHHHHHS----CCCCEEEECCCCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHHTT---------CCEEEEEEEGG
T ss_pred             HHhhhhhhcc----ceeehhhccccccccc--ccccccccccccccccccccchhhhccC---------Ccccccccccc
Confidence            9988888753    5789999999875432  2334556778999999999998886432         34777776665


Q ss_pred             ccccccCCC---CCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCC
Q 021391          173 HRFAYSEGI---RFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNL  237 (313)
Q Consensus       173 ~~~~~~~~~---~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~  237 (313)
                      .....+...   ....+.+.....+...|+.+|.+.+.+++.+...++     +.+.++.|+.+-.+.
T Consensus       147 ~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~g-----l~~~~lR~~~vyG~~  209 (383)
T d1gy8a_         147 IFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYG-----IKGICLRYFNACGAH  209 (383)
T ss_dssp             GTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHC-----CEEEEEEECEEECCC
T ss_pred             cccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHhC-----CCEEEEecceeeccC
Confidence            543322111   112234455666778899999999999988877654     777778887765543

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=1e-15  Score=130.30  Aligned_cols=199  Identities=14%  Similarity=0.030  Sum_probs=132.6

Q ss_pred             hccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHH
Q 021391           21 VTQGIDGTGLTAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKF   98 (313)
Q Consensus        21 ~~~~~~~~gk~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~   98 (313)
                      +..++.|++|+||||||||.||++++++|+++|.  +|++++|+........        ...+....+|+.+.+++...
T Consensus         6 ~~~~~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~--------~~~i~~~~~D~~~~~~~~~~   77 (232)
T d2bkaa1           6 LREDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA--------YKNVNQEVVDFEKLDDYASA   77 (232)
T ss_dssp             HHHHHHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG--------GGGCEEEECCGGGGGGGGGG
T ss_pred             HHHHhCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc--------cceeeeeeeccccccccccc
Confidence            3456678899999999999999999999999996  8999999764432110        23567777888886654333


Q ss_pred             HHHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccccc
Q 021391           99 ASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYS  178 (313)
Q Consensus        99 ~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~  178 (313)
                             +.++|+++|++|...     ..........+|+.++..+++.+...         .-.++|++|+......  
T Consensus        78 -------~~~~d~vi~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~a~~~---------~v~~fi~~Ss~~~~~~--  134 (232)
T d2bkaa1          78 -------FQGHDVGFCCLGTTR-----GKAGAEGFVRVDRDYVLKSAELAKAG---------GCKHFNLLSSKGADKS--  134 (232)
T ss_dssp             -------GSSCSEEEECCCCCH-----HHHHHHHHHHHHTHHHHHHHHHHHHT---------TCCEEEEECCTTCCTT--
T ss_pred             -------ccccccccccccccc-----cccchhhhhhhcccccceeeeccccc---------CccccccCCccccccC--
Confidence                   347899999998542     12344556788999988888877432         2347999998765422  


Q ss_pred             CCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHH-------
Q 021391          179 EGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTV-------  251 (313)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~-------  251 (313)
                                     ....|+.+|...+...+.    ++..    ++..+.||.+-.+..... ....+....       
T Consensus       135 ---------------~~~~Y~~~K~~~E~~l~~----~~~~----~~~IlRP~~i~G~~~~~~-~~~~~~~~~~~~~~~~  190 (232)
T d2bkaa1         135 ---------------SNFLYLQVKGEVEAKVEE----LKFD----RYSVFRPGVLLCDRQESR-PGEWLVRKFFGSLPDS  190 (232)
T ss_dssp             ---------------CSSHHHHHHHHHHHHHHT----TCCS----EEEEEECCEEECTTGGGS-HHHHHHHHHHCSCCTT
T ss_pred             ---------------ccchhHHHHHHhhhcccc----cccc----ceEEecCceeecCCCcCc-HHHHHHHHHhhccCCc
Confidence                           234699999887764432    2211    356789999977643321 111111111       


Q ss_pred             -HHhhcCChHHHHHHHHHHHccCC
Q 021391          252 -GKLVLKNIPQGAATTCYVALHPQ  274 (313)
Q Consensus       252 -~~~~~~~~~eva~~~~~l~~~~~  274 (313)
                       ......+++|+|++++.++..+.
T Consensus       191 ~~~~~~I~~~dvA~a~i~~~~~~~  214 (232)
T d2bkaa1         191 WASGHSVPVVTVVRAMLNNVVRPR  214 (232)
T ss_dssp             GGGGTEEEHHHHHHHHHHHHTSCC
T ss_pred             ccCCCeEEHHHHHHHHHHHHhcCc
Confidence             11123567999999999887443

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.54  E-value=3.9e-14  Score=119.39  Aligned_cols=211  Identities=14%  Similarity=0.049  Sum_probs=130.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCE--EEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVH--VIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~--V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      +|||||||+|+||++++++|+++|+.  |+...|+.++....         ..++.++.+|+++.++..++++       
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~---------~~~~~~~~~d~~~~~~~~~~~~-------   67 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI---------GGEADVFIGDITDADSINPAFQ-------   67 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT---------TCCTTEEECCTTSHHHHHHHHT-------
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc---------cCCcEEEEeeeccccccccccc-------
Confidence            79999999999999999999999964  66667876543321         3468899999999999887765       


Q ss_pred             CeeEEEEcccCCCCCC-----------ccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcccccc
Q 021391          108 PLNILINNAGIMASPF-----------MLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFA  176 (313)
Q Consensus       108 ~id~lv~~ag~~~~~~-----------~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~  176 (313)
                      .+|.+||+++......           ............+|+.+...++.......         .+...+.++.....+
T Consensus        68 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~s~~~~~~~  138 (252)
T d2q46a1          68 GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG---------VKHIVVVGSMGGTNP  138 (252)
T ss_dssp             TCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT---------CSEEEEEEETTTTCT
T ss_pred             cceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccc---------ccccccccccccCCC
Confidence            6899999998653211           22234456667888888888776654432         346666665443322


Q ss_pred             ccCCCCCCCCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHH--HHHh
Q 021391          177 YSEGIRFDKINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNT--VGKL  254 (313)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~--~~~~  254 (313)
                      ..          .........|...+.+    ...+   ....|  +++..++||.+-.+..............  ....
T Consensus       139 ~~----------~~~~~~~~~~~~~~~~----~~~~---~~~~~--~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~  199 (252)
T d2q46a1         139 DH----------PLNKLGNGNILVWKRK----AEQY---LADSG--TPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDT  199 (252)
T ss_dssp             TC----------GGGGGGGCCHHHHHHH----HHHH---HHHSS--SCEEEEEECEEECSCTTSSCEEEESTTGGGGSSC
T ss_pred             Cc----------ccccccccchhhhhhh----hhhh---hhccc--ccceeecceEEECCCcchhhhhhccCcccccCCC
Confidence            11          0000112233333322    2222   23345  7888999998866543322111000000  0112


Q ss_pred             hcCChHHHHHHHHHHHccCCccCCCceeecCCc
Q 021391          255 VLKNIPQGAATTCYVALHPQVQGVSGEYFSDSN  287 (313)
Q Consensus       255 ~~~~~~eva~~~~~l~~~~~~~~~tG~~~~~~~  287 (313)
                      ...+.+|+|++++.++.++.   ..|+.++..+
T Consensus       200 ~~i~~~Dva~a~~~~l~~~~---~~g~~~~i~~  229 (252)
T d2q46a1         200 KTVPRADVAEVCIQALLFEE---AKNKAFDLGS  229 (252)
T ss_dssp             CEEEHHHHHHHHHHHTTCGG---GTTEEEEEEE
T ss_pred             CeEEHHHHHHHHHHHhCCcc---ccCcEEEEee
Confidence            24578999999999998554   3577666543

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.35  E-value=1.2e-11  Score=106.67  Aligned_cols=187  Identities=21%  Similarity=0.203  Sum_probs=123.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      ++||||||||.||++++++|.++|++|+.++|+.                       +|++|.+++++++++.     ++
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~-----------------------~D~~d~~~~~~~l~~~-----~~   53 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD-----------------------LDITNVLAVNKFFNEK-----KP   53 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-----------------------CCTTCHHHHHHHHHHH-----CC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh-----------------------ccCCCHHHHHHHHHHc-----CC
Confidence            4699999999999999999999999999998752                       5899999999988876     78


Q ss_pred             eEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCC
Q 021391          110 NILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDE  189 (313)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~  189 (313)
                      |+|||+++....  +......+..+..|+.....+.......          ...+++.||..... .+..   ....+.
T Consensus        54 d~vih~a~~~~~--~~~~~~~~~~~~~n~~~~~~~~~~~~~~----------~~~~~~~ss~~v~~-~~~~---~~~~e~  117 (281)
T d1vl0a_          54 NVVINCAAHTAV--DKCEEQYDLAYKINAIGPKNLAAAAYSV----------GAEIVQISTDYVFD-GEAK---EPITEF  117 (281)
T ss_dssp             SEEEECCCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHH----------TCEEEEEEEGGGSC-SCCS---SCBCTT
T ss_pred             CEEEeecccccc--ccccccchhhcccccccccccccccccc----------cccccccccceeee-cccc---cccccc
Confidence            999999986432  2233444566777777777766655433          33556665544332 2211   112233


Q ss_pred             CCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCCccccchhHhHHHHHHHh-----------hcCC
Q 021391          190 SAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNLFRYNGILRGFCNTVGKL-----------VLKN  258 (313)
Q Consensus       190 ~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~-----------~~~~  258 (313)
                      ....+...|+.+|...+.+++.    .   +  +.+..+.|+.+-.+..+   +...+.......           ....
T Consensus       118 ~~~~~~~~~~~~k~~~e~~~~~----~---~--~~~~i~R~~~vyG~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~  185 (281)
T d1vl0a_         118 DEVNPQSAYGKTKLEGENFVKA----L---N--PKYYIVRTAWLYGDGNN---FVKTMINLGKTHDELKVVHDQVGTPTS  185 (281)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHH----H---C--SSEEEEEECSEESSSSC---HHHHHHHHHHHCSEEEEESSCEECCEE
T ss_pred             ccccchhhhhhhhhHHHHHHHH----h---C--CCccccceeEEeCCCcc---cccchhhhhccCCceeecCCceeccch
Confidence            3445667899999887765543    2   2  34556888888655322   222222222111           2346


Q ss_pred             hHHHHHHHHHHHcc
Q 021391          259 IPQGAATTCYVALH  272 (313)
Q Consensus       259 ~~eva~~~~~l~~~  272 (313)
                      .+|+++++..++.+
T Consensus       186 v~D~~~~~~~~~~~  199 (281)
T d1vl0a_         186 TVDLARVVLKVIDE  199 (281)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             hhhhhhhhhhhhhh
Confidence            78899998888864

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.30  E-value=4.4e-12  Score=110.23  Aligned_cols=141  Identities=18%  Similarity=0.155  Sum_probs=100.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      ++||||||+|.||+++++.|.++|. ++.++++...                   +..|++|.+.+++++++.     ++
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~-------------------~~~Dl~~~~~~~~~i~~~-----~~   55 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKE-------------------FCGDFSNPKGVAETVRKL-----RP   55 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCSS-------------------SCCCTTCHHHHHHHHHHH-----CC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCcc-------------------ccCcCCCHHHHHHHHHHc-----CC
Confidence            4699999999999999999999986 4444444211                   347999999999999876     79


Q ss_pred             eEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCCC
Q 021391          110 NILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKINDE  189 (313)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~  189 (313)
                      |+|||+||....  ....+.....+++|+.+...+..++..          .+.+++++||........ .   ...++.
T Consensus        56 D~Vih~Aa~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~----------~~~~~~~~ss~~~~~~~~-~---~~~~E~  119 (298)
T d1n2sa_          56 DVIVNAAAHTAV--DKAESEPELAQLLNATSVEAIAKAANE----------TGAWVVHYSTDYVFPGTG-D---IPWQET  119 (298)
T ss_dssp             SEEEECCCCCCH--HHHTTCHHHHHHHHTHHHHHHHHHHTT----------TTCEEEEEEEGGGSCCCT-T---CCBCTT
T ss_pred             CEEEEecccccc--cccccCccccccccccccccchhhhhc----------cccccccccccccccCCC-C---CCCccc
Confidence            999999996532  223455567889999999988887732          245777777765443221 1   123344


Q ss_pred             CCCCccccchHhHHHHHHHHHH
Q 021391          190 SAYNSFGAYGQSKLANILHAKE  211 (313)
Q Consensus       190 ~~~~~~~~Y~asK~a~~~l~~~  211 (313)
                      ....+...|+.+|.+.+.+.+.
T Consensus       120 ~~~~p~~~y~~~k~~~e~~~~~  141 (298)
T d1n2sa_         120 DATSPLNVYGKTKLAGEKALQD  141 (298)
T ss_dssp             SCCCCSSHHHHHHHHHHHHHHH
T ss_pred             cccCCCchHhhhhhhhhhhHHh
Confidence            4455667899999887765543

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.29  E-value=8e-12  Score=103.96  Aligned_cols=185  Identities=16%  Similarity=0.091  Sum_probs=116.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      -|++|||||||.||++++++|+++|+  +|+...|+...          .  ..+   +..+..|..++   .   ....
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~----------~--~~~---~~~~~~d~~~~---~---~~~~   60 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------E--HPR---LDNPVGPLAEL---L---PQLD   60 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------C--CTT---EECCBSCHHHH---G---GGCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh----------h--ccc---ccccccchhhh---h---hccc
Confidence            48999999999999999999999998  67777765321          0  112   34445554332   1   1234


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                      +.+|.+|+++|....    .....+...++|+.++.++++.+...         .-.+++++||..+...          
T Consensus        61 ~~~d~vi~~~g~~~~----~~~~~~~~~~~~~~~~~~~~~~a~~~---------~v~~~i~~Ss~~~~~~----------  117 (212)
T d2a35a1          61 GSIDTAFCCLGTTIK----EAGSEEAFRAVDFDLPLAVGKRALEM---------GARHYLVVSALGADAK----------  117 (212)
T ss_dssp             SCCSEEEECCCCCHH----HHSSHHHHHHHHTHHHHHHHHHHHHT---------TCCEEEEECCTTCCTT----------
T ss_pred             cchheeeeeeeeecc----ccccccccccchhhhhhhcccccccc---------cccccccccccccccc----------
Confidence            578999999986422    12233567889999998888876432         2358999998765422          


Q ss_pred             CCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcE-EEEEeeCcccccCCcccc--chh-HhHHHHH-HHhhcCChHH
Q 021391          187 NDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNI-TANSLHPGSIVTNLFRYN--GIL-RGFCNTV-GKLVLKNIPQ  261 (313)
Q Consensus       187 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I-~vn~i~PG~v~t~~~~~~--~~~-~~~~~~~-~~~~~~~~~e  261 (313)
                             ....|..+|...|.+++       ..+  . ++..+.|+.+-.+.....  ... ....... ...+....+|
T Consensus       118 -------~~~~y~~~K~~~E~~l~-------~~~--~~~~~I~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  181 (212)
T d2a35a1         118 -------SSIFYNRVKGELEQALQ-------EQG--WPQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEACD  181 (212)
T ss_dssp             -------CSSHHHHHHHHHHHHHT-------TSC--CSEEEEEECCSEESTTSCEEGGGGTTCCCC----CHHHHHHHHH
T ss_pred             -------cccchhHHHHHHhhhcc-------ccc--cccceeeCCcceeCCcccccHHHHHHHHHhhccCCCCcEEEHHH
Confidence                   34569999987765443       223  2 466789998865543211  000 0000000 1112356899


Q ss_pred             HHHHHHHHHccC
Q 021391          262 GAATTCYVALHP  273 (313)
Q Consensus       262 va~~~~~l~~~~  273 (313)
                      +|++++.++.++
T Consensus       182 vA~ai~~~~~~~  193 (212)
T d2a35a1         182 LARALWRLALEE  193 (212)
T ss_dssp             HHHHHHHHHTCC
T ss_pred             HHHHHHHHHcCC
Confidence            999999998743

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.27  E-value=6.4e-12  Score=109.78  Aligned_cols=83  Identities=8%  Similarity=0.082  Sum_probs=61.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      .++||||||||.||++++++|+++|++|+++.|+..................++.++.+|++|.+++.+.+.       +
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~-------~   75 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-------Q   75 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-------T
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhcc-------C
Confidence            356999999999999999999999999999999754322111111111114568999999999988877665       6


Q ss_pred             eeEEEEcccC
Q 021391          109 LNILINNAGI  118 (313)
Q Consensus       109 id~lv~~ag~  118 (313)
                      .+.++++++.
T Consensus        76 ~~~~~~~~~~   85 (312)
T d1qyda_          76 VDVVISALAG   85 (312)
T ss_dssp             CSEEEECCCC
T ss_pred             cchhhhhhhh
Confidence            7888888864

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.12  E-value=1e-10  Score=104.51  Aligned_cols=151  Identities=15%  Similarity=0.038  Sum_probs=94.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHH-HHHHHHHHhhcC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLAS-VRKFASEYNSQG  106 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~-v~~~~~~~~~~~  106 (313)
                      +.|+|+||||||.||++++++|+++|++|+++.|+......  ..+..   ..++.++++|++|..+ ++.++       
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~~---~~~v~~~~gD~~d~~~~~~~a~-------   69 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQA---IPNVTLFQGPLLNNVPLMDTLF-------   69 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHT---STTEEEEESCCTTCHHHHHHHH-------
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhcc---cCCCEEEEeeCCCcHHHHHHHh-------
Confidence            56999999999999999999999999999999998765432  22222   3468999999999655 33333       


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCC
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKI  186 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~  186 (313)
                      ...|.++.+.....              ..++....+++.++.    +.     ...++++.||.......+.       
T Consensus        70 ~~~~~~~~~~~~~~--------------~~~~~~~~~~~~aa~----~a-----gv~~~v~~Ss~~~~~~~~~-------  119 (350)
T d1xgka_          70 EGAHLAFINTTSQA--------------GDEIAIGKDLADAAK----RA-----GTIQHYIYSSMPDHSLYGP-------  119 (350)
T ss_dssp             TTCSEEEECCCSTT--------------SCHHHHHHHHHHHHH----HH-----SCCSEEEEEECCCGGGTSS-------
T ss_pred             cCCceEEeeccccc--------------chhhhhhhHHHHHHH----Hh-----CCCceEEEeeccccccCCc-------
Confidence            36778777653211              122333344444442    21     1347777777654433221       


Q ss_pred             CCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCccccc
Q 021391          187 NDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVT  235 (313)
Q Consensus       187 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t  235 (313)
                            .....|..+|...+.+.+.       .+  +....+.||.+..
T Consensus       120 ------~~~~~~~~~k~~~~~~~~~-------~~--~~~~~vr~~~~~~  153 (350)
T d1xgka_         120 ------WPAVPMWAPKFTVENYVRQ-------LG--LPSTFVYAGIYNN  153 (350)
T ss_dssp             ------CCCCTTTHHHHHHHHHHHT-------SS--SCEEEEEECEEGG
T ss_pred             ------ccchhhhhhHHHHHHHHHh-------hc--cCceeeeeceeec
Confidence                  1334577788766554433       23  4556677776543

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.03  E-value=8.8e-14  Score=114.07  Aligned_cols=48  Identities=15%  Similarity=0.216  Sum_probs=43.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhC
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEI   77 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~   77 (313)
                      +++.|+||+|++|+++|+.|++.|++|++++|++++++.+.+++....
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~   48 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIA   48 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC
Confidence            357788888999999999999999999999999999999999887653

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.02  E-value=1.8e-09  Score=93.58  Aligned_cols=170  Identities=15%  Similarity=0.108  Sum_probs=102.7

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh--hcCCC
Q 021391           32 AIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN--SQGRP  108 (313)
Q Consensus        32 ~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~--~~~g~  108 (313)
                      ||||||+|.||++++++|+++|+ .|+.+++-....+ ... +.    .    ...+|..+..   ...+...  ..+..
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~-~~~-~~----~----~~~~~~~~~~---~~~~~~~~~~~~~~   68 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FVN-LV----D----LNIADYMDKE---DFLIQIMAGEEFGD   68 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG-GHH-HH----T----SCCSEEEEHH---HHHHHHHTTCCCSS
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcch-hhc-cc----c----cchhhhccch---HHHHHHhhhhcccc
Confidence            79999999999999999999997 5777763222111 111 11    1    1122333332   2333332  23457


Q ss_pred             eeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCCCCCC
Q 021391          109 LNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFDKIND  188 (313)
Q Consensus       109 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~  188 (313)
                      +++++|.|+....    .....+...+.|+.+...+++++...          +-++|+.||.....+..    ....+.
T Consensus        69 ~~~i~~~aa~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~----------~i~~v~~ss~~~~~~~~----~~~~~~  130 (307)
T d1eq2a_          69 VEAIFHEGACSST----TEWDGKYMMDNNYQYSKELLHYCLER----------EIPFLYASSAATYGGRT----SDFIES  130 (307)
T ss_dssp             CCEEEECCSCCCT----TCCCHHHHHHHTHHHHHHHHHHHHHH----------TCCEEEEEEGGGGTTCC----SCBCSS
T ss_pred             hhhhhhhcccccc----cccccccccccccccccccccccccc----------ccccccccccccccccc----cccccc
Confidence            8999999875432    23345566778888888887765533          23456666555443322    112233


Q ss_pred             CCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEeeCcccccCC
Q 021391          189 ESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLHPGSIVTNL  237 (313)
Q Consensus       189 ~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~PG~v~t~~  237 (313)
                      ....++...|+.+|.+.+.+++.++.+++     +.+..+.|..+-.|.
T Consensus       131 ~~~~~~~~~Y~~~K~~~e~~~~~~~~~~~-----~~~~~~r~~~vyGp~  174 (307)
T d1eq2a_         131 REYEKPLNVYGYSKFLFDEYVRQILPEAN-----SQIVGFRYFNVYGPR  174 (307)
T ss_dssp             GGGCCCSSHHHHHHHHHHHHHHHHGGGCS-----SCEEEEEECEEESSS
T ss_pred             ccccccccccccccchhhhhccccccccc-----cccccccceeEeecc
Confidence            33445667899999999998888765544     455666676665543

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=98.96  E-value=3.6e-09  Score=91.15  Aligned_cols=83  Identities=16%  Similarity=0.217  Sum_probs=63.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHH--HHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKD--VREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~--~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      ..|+||||||||.||++++++|+++|++|++++|+......  ....+... ....+.++.+|+.+.......++     
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~-----   75 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESF-KASGANIVHGSIDDHASLVEAVK-----   75 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHH-HTTTCEEECCCTTCHHHHHHHHH-----
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhh-ccCCcEEEEeecccchhhhhhhh-----
Confidence            35889999999999999999999999999999997644221  11112211 13468899999999998777766     


Q ss_pred             CCCeeEEEEcccC
Q 021391          106 GRPLNILINNAGI  118 (313)
Q Consensus       106 ~g~id~lv~~ag~  118 (313)
                        ..+.++|+++.
T Consensus        76 --~~~~vi~~~~~   86 (307)
T d1qyca_          76 --NVDVVISTVGS   86 (307)
T ss_dssp             --TCSEEEECCCG
T ss_pred             --hceeeeecccc
Confidence              67889998864

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.28  E-value=3.1e-06  Score=67.85  Aligned_cols=88  Identities=17%  Similarity=0.200  Sum_probs=67.9

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHH---HHHHHhCCCCceEEEEccCCCHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVR---EAIVKEIPSAKVDAMELDVSSLASVRKF   98 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~---~~l~~~~~~~~~~~~~~D~s~~~~v~~~   98 (313)
                      ...++++|+|+|.|+ ||.|++++..|++.|. +++++.|+.+..+++.   +.+...   ........|+.+.+++...
T Consensus        12 ~~~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~   87 (182)
T d1vi2a1          12 SGFDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNEN---TDCVVTVTDLADQQAFAEA   87 (182)
T ss_dssp             TTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHH---SSCEEEEEETTCHHHHHHH
T ss_pred             cCCCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhh---cCcceEeeecccccchhhh
Confidence            467899999999999 6999999999999998 7999999887666543   333333   2345668899998877665


Q ss_pred             HHHHhhcCCCeeEEEEcccCCCC
Q 021391           99 ASEYNSQGRPLNILINNAGIMAS  121 (313)
Q Consensus        99 ~~~~~~~~g~id~lv~~ag~~~~  121 (313)
                      ..       ..|++||+......
T Consensus        88 ~~-------~~diiIN~Tp~G~~  103 (182)
T d1vi2a1          88 LA-------SADILTNGTKVGMK  103 (182)
T ss_dssp             HH-------TCSEEEECSSTTST
T ss_pred             hc-------ccceeccccCCccc
Confidence            54       68999999865433

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.10  E-value=5.5e-06  Score=66.22  Aligned_cols=79  Identities=16%  Similarity=0.264  Sum_probs=55.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      +|.++||+||+||+|.+.++.....|++|+.+++++++.+.+.+     . +....+   |-.+++..+...+..  ...
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~-----~-Ga~~vi---~~~~~~~~~~~~~~~--~~~   97 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ-----I-GFDAAF---NYKTVNSLEEALKKA--SPD   97 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-----T-TCSEEE---ETTSCSCHHHHHHHH--CTT
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHh-----h-hhhhhc---ccccccHHHHHHHHh--hcC
Confidence            68999999999999999999999999999999998776544332     1 332222   333333333333322  234


Q ss_pred             CeeEEEEccc
Q 021391          108 PLNILINNAG  117 (313)
Q Consensus       108 ~id~lv~~ag  117 (313)
                      ++|+++++.|
T Consensus        98 Gvd~v~D~vG  107 (182)
T d1v3va2          98 GYDCYFDNVG  107 (182)
T ss_dssp             CEEEEEESSC
T ss_pred             CCceeEEecC
Confidence            7999999997

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=98.06  E-value=6.8e-06  Score=66.12  Aligned_cols=87  Identities=16%  Similarity=0.239  Sum_probs=57.1

Q ss_pred             CCCEEEE-eCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh-c
Q 021391           28 TGLTAIV-TGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS-Q  105 (313)
Q Consensus        28 ~gk~~lI-tGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~-~  105 (313)
                      .|.+++| +||+||+|.+.++-.-..|++|+.+.|+.++.++..+.+.+.  +... .+..|-.+..++...++++.. .
T Consensus        28 ~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~l--Gad~-vi~~~~~~~~~~~~~v~~~~~~~  104 (189)
T d1gu7a2          28 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKEL--GATQ-VITEDQNNSREFGPTIKEWIKQS  104 (189)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHH--TCSE-EEEHHHHHCGGGHHHHHHHHHHH
T ss_pred             CCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhc--cccE-EEeccccchhHHHHHHHHHHhhc
Confidence            4555555 799999999999888889999999999888777766665554  2222 222221122223333444433 3


Q ss_pred             CCCeeEEEEccc
Q 021391          106 GRPLNILINNAG  117 (313)
Q Consensus       106 ~g~id~lv~~ag  117 (313)
                      .+++|+++++.|
T Consensus       105 g~~vdvv~D~vg  116 (189)
T d1gu7a2         105 GGEAKLALNCVG  116 (189)
T ss_dssp             TCCEEEEEESSC
T ss_pred             cCCceEEEECCC
Confidence            457999999986

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.03  E-value=1.2e-05  Score=63.34  Aligned_cols=75  Identities=19%  Similarity=0.276  Sum_probs=55.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      ++|+|+|.|| |.+|+.+|+.|+++|++|++++|+.+++++..+.      .........+..+.......+.       
T Consensus         1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~------~~~~~~~~~~~~~~~~~~~~i~-------   66 (182)
T d1e5qa1           1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG------VQHSTPISLDVNDDAALDAEVA-------   66 (182)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTT------CTTEEEEECCTTCHHHHHHHHT-------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhc------ccccccccccccchhhhHhhhh-------
Confidence            4799999987 9999999999999999999999999888776543      2234445566666666555544       


Q ss_pred             CeeEEEEcc
Q 021391          108 PLNILINNA  116 (313)
Q Consensus       108 ~id~lv~~a  116 (313)
                      ..|.++.+.
T Consensus        67 ~~~~~i~~~   75 (182)
T d1e5qa1          67 KHDLVISLI   75 (182)
T ss_dssp             TSSEEEECS
T ss_pred             ccceeEeec
Confidence            456666554

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.02  E-value=1.3e-05  Score=63.36  Aligned_cols=79  Identities=18%  Similarity=0.270  Sum_probs=55.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      +|.+|||+||+|++|...++.+...|++|+.+++++++.+.+. +    . +...   ..|.++.+-.+.+.+..  ...
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~-~----~-Ga~~---vi~~~~~~~~~~i~~~t--~~~   96 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL-Q----N-GAHE---VFNHREVNYIDKIKKYV--GEK   96 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-H----T-TCSE---EEETTSTTHHHHHHHHH--CTT
T ss_pred             CCCEEEEEeccccccccccccccccCccccccccccccccccc-c----c-Cccc---ccccccccHHHHhhhhh--ccC
Confidence            7899999999999999999998899999999998876554332 2    2 2221   23666655444433322  123


Q ss_pred             CeeEEEEccc
Q 021391          108 PLNILINNAG  117 (313)
Q Consensus       108 ~id~lv~~ag  117 (313)
                      ++|+++.+.|
T Consensus        97 g~d~v~d~~g  106 (174)
T d1yb5a2          97 GIDIIIEMLA  106 (174)
T ss_dssp             CEEEEEESCH
T ss_pred             CceEEeeccc
Confidence            6999999886

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.98  E-value=5.5e-06  Score=65.99  Aligned_cols=81  Identities=20%  Similarity=0.246  Sum_probs=53.7

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      ..-+|.++||+||+||+|...++-....|++|+.++++.++.+.+.+ +     +... .+  |-.+.  ..+...  ..
T Consensus        28 ~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~-l-----Ga~~-vi--~~~~~--~~~~~~--~~   94 (176)
T d1xa0a2          28 LTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-L-----GAKE-VL--AREDV--MAERIR--PL   94 (176)
T ss_dssp             CCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-T-----TCSE-EE--ECC-------------C
T ss_pred             CCCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHh-c-----ccce-ee--ecchh--HHHHHH--Hh
Confidence            33468999999999999999998888999999999999888665432 2     3322 22  22221  111111  11


Q ss_pred             cCCCeeEEEEcccC
Q 021391          105 QGRPLNILINNAGI  118 (313)
Q Consensus       105 ~~g~id~lv~~ag~  118 (313)
                      ..+++|+++.+.|.
T Consensus        95 ~~~gvD~vid~vgg  108 (176)
T d1xa0a2          95 DKQRWAAAVDPVGG  108 (176)
T ss_dssp             CSCCEEEEEECSTT
T ss_pred             hccCcCEEEEcCCc
Confidence            23579999999984

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.91  E-value=1.9e-05  Score=62.31  Aligned_cols=79  Identities=18%  Similarity=0.290  Sum_probs=59.6

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      ..++++||+|||.|| ||.+++++..|.+.|.+|.++.|+.++.+++.+.+...+   .+..  .+..+.          
T Consensus        12 ~~~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~---~~~~--~~~~~~----------   75 (170)
T d1nyta1          12 LSFIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG---SIQA--LSMDEL----------   75 (170)
T ss_dssp             HTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS---SEEE--CCSGGG----------
T ss_pred             cCCCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcc---cccc--cccccc----------
Confidence            467889999999997 788999999999999999999999999888777654432   2222  222221          


Q ss_pred             hhcCCCeeEEEEcccCC
Q 021391          103 NSQGRPLNILINNAGIM  119 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~  119 (313)
                        .....|++||+....
T Consensus        76 --~~~~~dliIN~Tp~G   90 (170)
T d1nyta1          76 --EGHEFDLIINATSSG   90 (170)
T ss_dssp             --TTCCCSEEEECCSCG
T ss_pred             --cccccceeecccccC
Confidence              123689999998654

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.89  E-value=3.5e-05  Score=61.00  Aligned_cols=80  Identities=13%  Similarity=0.194  Sum_probs=57.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .|+++||+||++++|..+++-....|++|+.+++++++.+.+. ++     +..   ..+|-++++-.+++.+ + ....
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-~l-----Ga~---~vi~~~~~d~~~~v~~-~-t~g~   96 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KA-----GAW---QVINYREEDLVERLKE-I-TGGK   96 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH-----TCS---EEEETTTSCHHHHHHH-H-TTTC
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH-hc-----CCe---EEEECCCCCHHHHHHH-H-hCCC
Confidence            5899999999999999999999999999999999988866543 22     322   2346666554433322 2 1234


Q ss_pred             CeeEEEEcccC
Q 021391          108 PLNILINNAGI  118 (313)
Q Consensus       108 ~id~lv~~ag~  118 (313)
                      ++|+++.+.|.
T Consensus        97 g~d~v~d~~g~  107 (179)
T d1qora2          97 KVRVVYDSVGR  107 (179)
T ss_dssp             CEEEEEECSCG
T ss_pred             CeEEEEeCccH
Confidence            79999999873

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.86  E-value=4.1e-05  Score=59.70  Aligned_cols=74  Identities=19%  Similarity=0.317  Sum_probs=57.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      +++++++||.|+ |++|+.+++.|...|+ ++.++.|+.+++++..+++     +..  ..     +.+++...+.    
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~-----~~~--~~-----~~~~~~~~l~----   83 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL-----GGE--AV-----RFDELVDHLA----   83 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH-----TCE--EC-----CGGGHHHHHH----
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhh-----hcc--cc-----cchhHHHHhc----
Confidence            689999999998 9999999999999998 6999999988888777665     222  21     2233444444    


Q ss_pred             cCCCeeEEEEcccCC
Q 021391          105 QGRPLNILINNAGIM  119 (313)
Q Consensus       105 ~~g~id~lv~~ag~~  119 (313)
                         ..|++|++.+..
T Consensus        84 ---~~Divi~atss~   95 (159)
T d1gpja2          84 ---RSDVVVSATAAP   95 (159)
T ss_dssp             ---TCSEEEECCSSS
T ss_pred             ---cCCEEEEecCCC
Confidence               689999998753

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.83  E-value=2.7e-05  Score=61.85  Aligned_cols=79  Identities=13%  Similarity=0.248  Sum_probs=54.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      +|+++||+||+|++|..+++.+...|++|++++++.++.+.+.    + . +.. +  ..|-.+++-.+.+.+..  ...
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~----~-~-Ga~-~--vi~~~~~~~~~~v~~~t--~~~   93 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS----R-L-GVE-Y--VGDSRSVDFADEILELT--DGY   93 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----T-T-CCS-E--EEETTCSTHHHHHHHHT--TTC
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeecccccccccc----c-c-ccc-c--cccCCccCHHHHHHHHh--CCC
Confidence            5899999999999999999988889999999998876654322    2 2 222 2  23445544333332211  123


Q ss_pred             CeeEEEEccc
Q 021391          108 PLNILINNAG  117 (313)
Q Consensus       108 ~id~lv~~ag  117 (313)
                      ++|+++.+.|
T Consensus        94 g~d~v~d~~g  103 (183)
T d1pqwa_          94 GVDVVLNSLA  103 (183)
T ss_dssp             CEEEEEECCC
T ss_pred             CEEEEEeccc
Confidence            6999999997

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.80  E-value=3.9e-05  Score=60.17  Aligned_cols=82  Identities=20%  Similarity=0.201  Sum_probs=56.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .|.+++|+| +|++|...+..+...|++|+++++++++.+.+.+ +     +... .+..|-.+. +.....+++....|
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~-~-----ga~~-~~~~~~~~~-~~~~~~~~~~~~~g   96 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-C-----GADV-TLVVDPAKE-EESSIIERIRSAIG   96 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-T-----TCSE-EEECCTTTS-CHHHHHHHHHHHSS
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH-c-----CCcE-EEecccccc-ccchhhhhhhcccc
Confidence            678999997 6899999999998999999999999887665432 2     2222 223332222 23444555555443


Q ss_pred             -CeeEEEEcccC
Q 021391          108 -PLNILINNAGI  118 (313)
Q Consensus       108 -~id~lv~~ag~  118 (313)
                       ++|++|.++|.
T Consensus        97 ~g~D~vid~~g~  108 (170)
T d1e3ja2          97 DLPNVTIDCSGN  108 (170)
T ss_dssp             SCCSEEEECSCC
T ss_pred             cCCceeeecCCC
Confidence             69999999984

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.77  E-value=0.00052  Score=52.49  Aligned_cols=119  Identities=14%  Similarity=0.144  Sum_probs=78.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHhCC--CCceEEEEccCCCHHHHHHHHHHH
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKEIP--SAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      -.++++.|.|| |.+|.++|..|+.+|.  .|++.+++++.++....++.....  .........|..+           
T Consensus         4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~~-----------   71 (148)
T d1ldna1           4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDD-----------   71 (148)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGG-----------
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCHHH-----------
Confidence            35678889997 9999999999999886  799999999887777777765321  2233333333311           


Q ss_pred             hhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391          103 NSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                         ...-|++|.++|....+..    .-.+.+..|.    .+.+.+.+.+.+.    .+++.++++|-..
T Consensus        72 ---l~daDvvvitag~~~~~~~----~R~dl~~~N~----~i~~~i~~~i~~~----~p~a~~ivvtNPv  126 (148)
T d1ldna1          72 ---CRDADLVVICAGANQKPGE----TRLDLVDKNI----AIFRSIVESVMAS----GFQGLFLVATNPV  126 (148)
T ss_dssp             ---TTTCSEEEECCSCCCCTTT----CSGGGHHHHH----HHHHHHHHHHHHH----TCCSEEEECSSSH
T ss_pred             ---hccceeEEEecccccccCc----chhHHHHHHH----HHHHHHHHHHHhh----CCCceEEEecCcc
Confidence               2367999999997644322    2223334443    3555566666664    3467778777654

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.75  E-value=0.00022  Score=54.44  Aligned_cols=117  Identities=15%  Similarity=0.129  Sum_probs=70.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           31 TAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      ++.|+||+|.+|.++|..|+.+|.  .+++.+.+..+.+.  ..+...  .. ......-+ ...+..+.++       .
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a--~Dl~~~--~~-~~~~~~~~-~~~~~~~~~~-------~   68 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVA--ADLSHI--ET-RATVKGYL-GPEQLPDCLK-------G   68 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHH--HHHTTS--SS-SCEEEEEE-SGGGHHHHHT-------T
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhh--HHHhhh--hh-hcCCCeEE-cCCChHHHhC-------C
Confidence            588999999999999999999986  69999987654332  233221  11 11111111 2222222222       6


Q ss_pred             eeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391          109 LNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus       109 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                      -|++|.++|....+.    +.-.+.++.|+.-.    +.+.+.+.+.    ..++.|+++|...
T Consensus        69 aDivVitag~~~~~g----~sR~~ll~~N~~i~----~~i~~~i~~~----~p~~iiivvtNPv  120 (144)
T d1mlda1          69 CDVVVIPAGVPRKPG----MTRDDLFNTNATIV----ATLTAACAQH----CPDAMICIISNPV  120 (144)
T ss_dssp             CSEEEECCSCCCCTT----CCGGGGHHHHHHHH----HHHHHHHHHH----CTTSEEEECSSCH
T ss_pred             CCEEEECCCcCCCCC----CCcchHHHHHHHHH----HHHHHHHHhc----CCCeEEEEecCch
Confidence            899999999754332    22334456666544    4555555554    4467888888755

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.74  E-value=0.0002  Score=54.78  Aligned_cols=118  Identities=11%  Similarity=0.119  Sum_probs=71.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHhC-CCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKEI-PSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      +.+++.|.|+ |.+|..+|..|+.+|.  .|++.+++++..+....++.... ..........|..+             
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~~-------------   69 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSD-------------   69 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGG-------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHHH-------------
Confidence            3568888896 9999999999999984  79999999887776666665421 12223444444321             


Q ss_pred             cCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391          105 QGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                       ....|++|.++|....+.    ..-...+..|+    .+.+.+.+.+.+.    ..++-++++|-..
T Consensus        70 -~~~adivvitag~~~~~g----~~r~~l~~~N~----~i~~~~~~~i~~~----~p~aivivvtNPv  124 (146)
T d1ez4a1          70 -CKDADLVVITAGAPQKPG----ESRLDLVNKNL----NILSSIVKPVVDS----GFDGIFLVAANPV  124 (146)
T ss_dssp             -GTTCSEEEECCCC--------------CHHHHH----HHHHHHHHHHHHT----TCCSEEEECSSSH
T ss_pred             -hccccEEEEecccccCCC----CCHHHHHHHHH----HHHHHHHHHHhhc----CCCcEEEEeCCcc
Confidence             236899999999754332    22333344554    3555566666664    3456666666543

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.71  E-value=0.00042  Score=53.66  Aligned_cols=124  Identities=12%  Similarity=0.095  Sum_probs=80.2

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHhCC--CCceEEEEccCCCHHHHHH
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKEIP--SAKVDAMELDVSSLASVRK   97 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~s~~~~v~~   97 (313)
                      .....++..++.|.|+ |.+|..+|..|+.+|.  .+++.+++.+.++....++.....  +........|..+      
T Consensus        12 ~~~~~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~~------   84 (159)
T d2ldxa1          12 VPEDKLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYNV------   84 (159)
T ss_dssp             SSCCCCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGGG------
T ss_pred             cccccCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchhh------
Confidence            3344466667888896 9999999999999986  799999998888777777765321  1122222333322      


Q ss_pred             HHHHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391           98 FASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus        98 ~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                              ...-|++|.++|....+. .+.+   ..++.|.    .+.+.+.+.+.+.    ..++.++++|...
T Consensus        85 --------~~~adivvitag~~~~~~-~~R~---dll~~N~----~i~~~i~~~i~~~----~p~~ivivvtNPv  139 (159)
T d2ldxa1          85 --------SANSKLVIITAGARMVSG-QTRL---DLLQRNV----AIMKAIVPGVIQN----SPDCKIIVVTNPV  139 (159)
T ss_dssp             --------GTTEEEEEECCSCCCCTT-TCSS---CTTHHHH----HHHHHHTTTHHHH----STTCEEEECSSSH
T ss_pred             --------hccccEEEEecccccCCC-CCHH---HHHHHHH----HHHHHHHHHHhcc----CCCeEEEEeCCcH
Confidence                    236899999999765443 2222   2233343    3455666666664    4467888887654

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.70  E-value=5.6e-05  Score=56.83  Aligned_cols=73  Identities=12%  Similarity=0.205  Sum_probs=57.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      ++|+|.|+ |.+|+.+++.|.++|+.|++++++++..+.+.++       ....++..|.++++..+.+-      ....
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~-------~~~~vi~Gd~~~~~~l~~~~------i~~a   66 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE-------IDALVINGDCTKIKTLEDAG------IEDA   66 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------CSSEEEESCTTSHHHHHHTT------TTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhh-------hhhhhccCcccchhhhhhcC------hhhh
Confidence            47899998 9999999999999999999999998887765432       14668899999998665441      1256


Q ss_pred             eEEEEcc
Q 021391          110 NILINNA  116 (313)
Q Consensus       110 d~lv~~a  116 (313)
                      |.++...
T Consensus        67 ~~vv~~t   73 (132)
T d1lssa_          67 DMYIAVT   73 (132)
T ss_dssp             SEEEECC
T ss_pred             hhhcccC
Confidence            7777754

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.69  E-value=0.00019  Score=56.82  Aligned_cols=83  Identities=22%  Similarity=0.242  Sum_probs=54.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      -+|.+|||+|| |++|...+..+...|+ +|+++++++++.+.+ +++     +.. +++...-.+..+..+.+.+... 
T Consensus        27 ~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~l-----Ga~-~vi~~~~~~~~~~~~~i~~~~~-   97 (182)
T d1vj0a2          27 FAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EEI-----GAD-LTLNRRETSVEERRKAIMDITH-   97 (182)
T ss_dssp             CBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HHT-----TCS-EEEETTTSCHHHHHHHHHHHTT-
T ss_pred             CCCCEEEEECC-Cccchhheeccccccccccccccccccccccc-ccc-----cce-EEEeccccchHHHHHHHHHhhC-
Confidence            36899999997 7999999999999998 899999998877643 332     222 2232222233233222222221 


Q ss_pred             CCCeeEEEEcccC
Q 021391          106 GRPLNILINNAGI  118 (313)
Q Consensus       106 ~g~id~lv~~ag~  118 (313)
                      ..++|++|.+.|.
T Consensus        98 ~~g~Dvvid~vG~  110 (182)
T d1vj0a2          98 GRGADFILEATGD  110 (182)
T ss_dssp             TSCEEEEEECSSC
T ss_pred             CCCceEEeecCCc
Confidence            2259999999985

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.67  E-value=7.1e-05  Score=59.01  Aligned_cols=79  Identities=15%  Similarity=0.201  Sum_probs=60.3

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      +.+++||+++|.|+ ||.+++++..|.+.+.+|+++.|+.++++...+.+...   ..+..+..|-.             
T Consensus        13 ~~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~---~~~~~~~~~~~-------------   75 (171)
T d1p77a1          13 NWLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY---GNIQAVSMDSI-------------   75 (171)
T ss_dssp             TCCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG---SCEEEEEGGGC-------------
T ss_pred             CCCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhc---cccchhhhccc-------------
Confidence            56789999999987 77799999999998889999999999988888777543   24455554422             


Q ss_pred             hcCCCeeEEEEcccCCC
Q 021391          104 SQGRPLNILINNAGIMA  120 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~  120 (313)
                       .....|++||+.....
T Consensus        76 -~~~~~diiIN~tp~g~   91 (171)
T d1p77a1          76 -PLQTYDLVINATSAGL   91 (171)
T ss_dssp             -CCSCCSEEEECCCC--
T ss_pred             -cccccceeeecccccc
Confidence             1247899999987543

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.66  E-value=0.00037  Score=53.18  Aligned_cols=120  Identities=14%  Similarity=0.112  Sum_probs=74.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHhC--CCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           30 LTAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKEI--PSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      |++.|.|+ |.+|.++|..|+.+|.  .+++.++++++++....++....  ..........|..+              
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~~~--------------   66 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWAA--------------   66 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGGG--------------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCHHH--------------
Confidence            67888895 8999999999999885  79999999988776666666432  12233333333222              


Q ss_pred             CCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391          106 GRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                      ...-|++|.++|......+-+-..-...++.|.    .+++.+.+.+.+.    ..++-++++|-..
T Consensus        67 l~~adiVVitaG~~~~~~~~~g~~R~~l~~~N~----~i~~~i~~~i~~~----~p~aivivvtNPv  125 (146)
T d1hyha1          67 LADADVVISTLGNIKLQQDNPTGDRFAELKFTS----SMVQSVGTNLKES----GFHGVLVVISNPV  125 (146)
T ss_dssp             GTTCSEEEECCSCGGGTC-------CTTHHHHH----HHHHHHHHHHHHT----TCCSEEEECSSSH
T ss_pred             hccccEEEEeccccccccccCCccHHHHHHHHH----HHHHHHHHHHhhc----CCCeEEEEecCcH
Confidence            126799999999754322111112223344453    4556677777664    3467777777544

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.65  E-value=4.2e-05  Score=51.86  Aligned_cols=43  Identities=23%  Similarity=0.325  Sum_probs=38.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHH
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDV   69 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~   69 (313)
                      -++.++||+||+||+|....+.+...|++|+.+.+++++.+.+
T Consensus        30 ~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (77)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             cCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            3688999999999999999998888999999999998877654

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.64  E-value=0.0001  Score=57.90  Aligned_cols=75  Identities=17%  Similarity=0.200  Sum_probs=52.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      -+|+++||+||+|++|...++.+...|++|+.+++++++.+.+. ++     +....   .|..+.  .    +++ ...
T Consensus        26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~-~l-----Ga~~~---i~~~~~--~----~~~-~~~   89 (171)
T d1iz0a2          26 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-AL-----GAEEA---ATYAEV--P----ERA-KAW   89 (171)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HT-----TCSEE---EEGGGH--H----HHH-HHT
T ss_pred             CCCCEEEEEeccccchhhhhhhhccccccccccccccccccccc-cc-----cccee---eehhhh--h----hhh-hcc
Confidence            47899999999999999999988889999999999877765433 22     22221   233221  1    222 223


Q ss_pred             CCeeEEEEccc
Q 021391          107 RPLNILINNAG  117 (313)
Q Consensus       107 g~id~lv~~ag  117 (313)
                      +++|+++.+.|
T Consensus        90 ~g~D~v~d~~G  100 (171)
T d1iz0a2          90 GGLDLVLEVRG  100 (171)
T ss_dssp             TSEEEEEECSC
T ss_pred             ccccccccccc
Confidence            57999999876

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.51  E-value=0.0021  Score=49.61  Aligned_cols=122  Identities=14%  Similarity=0.028  Sum_probs=79.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHhC--CCCceEEEEccCCCHHHHHHHH
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKEI--PSAKVDAMELDVSSLASVRKFA   99 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~D~s~~~~v~~~~   99 (313)
                      ...++.+++.|.|+ |.+|.++|..|+.+|.  .+++.+++++..+.....+....  ..........|..+.       
T Consensus        15 ~~~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~~-------   86 (160)
T d1i0za1          15 EATVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSVT-------   86 (160)
T ss_dssp             CCCCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGGGG-------
T ss_pred             cccCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchhhc-------
Confidence            44456678888896 9999999999999997  79999999888777676675421  122222223333321       


Q ss_pred             HHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391          100 SEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus       100 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                             ..-|++|.+||....+. .+   -...+..|..    +++.+.+.+.+.    ..++-++++|-..
T Consensus        87 -------~~adiVVitAg~~~~~g-~t---R~~l~~~N~~----i~~~i~~~i~~~----~p~aiiivvtNPv  140 (160)
T d1i0za1          87 -------ANSKIVVVTAGVRQQEG-ES---RLNLVQRNVN----VFKFIIPQIVKY----SPDCIIIVVSNPV  140 (160)
T ss_dssp             -------TTCSEEEECCSCCCCTT-CC---GGGGHHHHHH----HHHHHHHHHHHH----CTTCEEEECSSSH
T ss_pred             -------ccccEEEEecCCccccC-cc---hHHHHHHHHH----HHHHHHHHHHhc----CCCcEEEEeCCch
Confidence                   36899999999754432 22   2234444443    566666666664    4467778777654

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.49  E-value=0.00027  Score=54.49  Aligned_cols=125  Identities=14%  Similarity=0.069  Sum_probs=75.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhC--CCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEI--PSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      -+.+++.|.|+ |.+|..+|..|+..+. .+++.+.+++.++.....+....  .+........  ++.   +...+   
T Consensus         5 ~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~--~~~---~~~~~---   75 (154)
T d1pzga1           5 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE--YSY---EAALT---   75 (154)
T ss_dssp             SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE--CSH---HHHHT---
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEecc--Cch---hhhhc---
Confidence            35678888897 9999999999999886 89999999887776666665421  1111111111  111   11122   


Q ss_pred             hcCCCeeEEEEcccCCCCCCccCc-cchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391          104 SQGRPLNILINNAGIMASPFMLSK-DNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~~~~~~-~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                          .-|++|.++|....+.+.+. ..-...+..|..    +++.+.+.+.+.    ..++-++++|...
T Consensus        76 ----~adiVvitag~~~~~g~~~~~~tR~~l~~~n~~----iv~~i~~~i~~~----~p~aiviivsNPv  133 (154)
T d1pzga1          76 ----GADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSK----IIREIGQNIKKY----CPKTFIIVVTNPL  133 (154)
T ss_dssp             ----TCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHH----HHHHHHHHHHHH----CTTCEEEECCSSH
T ss_pred             ----CCCeEEEecccccCCCCCCcccchhhhhhhhHH----HHHHHHHHHHhc----CCCcEEEEeCCcH
Confidence                67999999998655432111 122233444444    455555555554    4467777777654

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.43  E-value=0.00014  Score=57.92  Aligned_cols=79  Identities=15%  Similarity=0.188  Sum_probs=52.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCE-EEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVH-VIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~-V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      .+++|||+||+||+|...++-.-..|++ |+.++.+.++.....+++     +..   ...|..+++ ..+.++++.  .
T Consensus        30 ~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~-----gad---~vi~~~~~~-~~~~~~~~~--~   98 (187)
T d1vj1a2          30 SNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL-----GFD---AAVNYKTGN-VAEQLREAC--P   98 (187)
T ss_dssp             SCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS-----CCS---EEEETTSSC-HHHHHHHHC--T
T ss_pred             CCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc-----cce---EEeeccchh-HHHHHHHHh--c
Confidence            3489999999999999999887779996 555566666655554443     222   233555443 333334332  2


Q ss_pred             CCeeEEEEccc
Q 021391          107 RPLNILINNAG  117 (313)
Q Consensus       107 g~id~lv~~ag  117 (313)
                      .++|+++.+.|
T Consensus        99 ~GvDvv~D~vG  109 (187)
T d1vj1a2          99 GGVDVYFDNVG  109 (187)
T ss_dssp             TCEEEEEESSC
T ss_pred             cCceEEEecCC
Confidence            36999999997

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.43  E-value=0.00081  Score=52.39  Aligned_cols=81  Identities=20%  Similarity=0.229  Sum_probs=56.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      .|.+++|.|+ |++|...+..+...|+ +|+++++++++++.+. ++     +.. +++..+-.+.......++.-  ..
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~-~~-----Ga~-~~~~~~~~~~~~~~~~~~~~--~g   95 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI-----GAD-LVLQISKESPQEIARKVEGQ--LG   95 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT-----TCS-EEEECSSCCHHHHHHHHHHH--HT
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHH-Hh-----CCc-cccccccccccccccccccc--CC
Confidence            5789999987 9999999999999999 7999999988766432 22     222 33344444544443333322  22


Q ss_pred             CCeeEEEEcccC
Q 021391          107 RPLNILINNAGI  118 (313)
Q Consensus       107 g~id~lv~~ag~  118 (313)
                      .++|++|.+.|.
T Consensus        96 ~g~Dvvid~~G~  107 (171)
T d1pl8a2          96 CKPEVTIECTGA  107 (171)
T ss_dssp             SCCSEEEECSCC
T ss_pred             CCceEEEeccCC
Confidence            379999999984

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.43  E-value=0.00037  Score=54.35  Aligned_cols=80  Identities=15%  Similarity=0.165  Sum_probs=55.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      .|.+++|+|++|++|..++..+...|+ +|+++++++++.+.+. ++     +.. +.  .|-++.+-.+...+..  ..
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~-~~-----Ga~-~~--i~~~~~~~~~~~~~~~--~~   95 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RA-----GAD-YV--INASMQDPLAEIRRIT--ES   95 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HH-----TCS-EE--EETTTSCHHHHHHHHT--TT
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHH-Hc-----CCc-ee--eccCCcCHHHHHHHHh--hc
Confidence            678999999999999999999999996 8999998877655443 22     322 22  2344444333333321  12


Q ss_pred             CCeeEEEEcccC
Q 021391          107 RPLNILINNAGI  118 (313)
Q Consensus       107 g~id~lv~~ag~  118 (313)
                      +.+|+++.++|.
T Consensus        96 ~~~d~vid~~g~  107 (170)
T d1jvba2          96 KGVDAVIDLNNS  107 (170)
T ss_dssp             SCEEEEEESCCC
T ss_pred             ccchhhhccccc
Confidence            469999999974

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.35  E-value=0.0026  Score=47.84  Aligned_cols=115  Identities=13%  Similarity=0.215  Sum_probs=74.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHhCC-CCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           31 TAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKEIP-SAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      ++.|.|+ |.+|.+++..|+.++.  ++++.++++++++....++....+ .........|..+              ..
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~~~--------------~~   66 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYAD--------------LK   66 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCGGG--------------GT
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcHHH--------------hc
Confidence            5677797 8999999999999875  799999998887776666654321 2233333333221              12


Q ss_pred             CeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391          108 PLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus       108 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                      .-|++|.++|....+.    ..-...+..|.    .+++.+.+.+.+.    .+++.++++|-..
T Consensus        67 ~adivvitag~~~~~g----~~r~dl~~~N~----~I~~~i~~~i~~~----~p~aivivvtNPv  119 (140)
T d1a5za1          67 GSDVVIVAAGVPQKPG----ETRLQLLGRNA----RVMKEIARNVSKY----APDSIVIVVTNPV  119 (140)
T ss_dssp             TCSEEEECCCCCCCSS----CCHHHHHHHHH----HHHHHHHHHHHHH----CTTCEEEECSSSH
T ss_pred             CCCEEEEecccccCCC----cchhhhhcccc----chHHHHHHHHHhc----CCCcEEEEeCCcH
Confidence            6799999999754432    11223344443    4566777777775    4467777776544

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.34  E-value=0.00047  Score=56.49  Aligned_cols=78  Identities=22%  Similarity=0.241  Sum_probs=54.4

Q ss_pred             CCCCCEEEEeCC----------------CCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccC
Q 021391           26 DGTGLTAIVTGA----------------SSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDV   89 (313)
Q Consensus        26 ~~~gk~~lItGa----------------s~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~   89 (313)
                      +|+||+||||+|                ||-+|.+||+.+..+|++|.++.-....           .+...+..  ..+
T Consensus         3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~-----------~~p~~~~~--~~~   69 (223)
T d1u7za_           3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL-----------PTPPFVKR--VDV   69 (223)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC-----------CCCTTEEE--EEC
T ss_pred             ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc-----------Cccccccc--cee
Confidence            689999999987                5789999999999999999988643211           01223333  344


Q ss_pred             CCHHHHHHHHHHHhhcCCCeeEEEEcccCC
Q 021391           90 SSLASVRKFASEYNSQGRPLNILINNAGIM  119 (313)
Q Consensus        90 s~~~~v~~~~~~~~~~~g~id~lv~~ag~~  119 (313)
                      .+.+++...+.+.   ....|++|++|.+.
T Consensus        70 ~t~~~m~~~~~~~---~~~~D~~i~aAAvs   96 (223)
T d1u7za_          70 MTALEMEAAVNAS---VQQQNIFIGCAAVA   96 (223)
T ss_dssp             CSHHHHHHHHHHH---GGGCSEEEECCBCC
T ss_pred             hhhHHHHHHHHhh---hccceeEeeeechh
Confidence            5555555444443   34579999999875

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.30  E-value=0.00022  Score=53.35  Aligned_cols=73  Identities=15%  Similarity=0.119  Sum_probs=54.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      |.++|.|+ |-+|+.+++.|.++|..|++++.+++..+++.+        .....+..|.++++..+.+--      ...
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~--------~~~~~~~gd~~~~~~l~~a~i------~~a   65 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS--------YATHAVIANATEENELLSLGI------RNF   65 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTT--------TCSEEEECCTTCTTHHHHHTG------GGC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHH--------hCCcceeeecccchhhhccCC------ccc
Confidence            56777776 789999999999999999999999887776432        234567799999887655411      146


Q ss_pred             eEEEEccc
Q 021391          110 NILINNAG  117 (313)
Q Consensus       110 d~lv~~ag  117 (313)
                      |.+|-+.+
T Consensus        66 ~~vi~~~~   73 (134)
T d2hmva1          66 EYVIVAIG   73 (134)
T ss_dssp             SEEEECCC
T ss_pred             cEEEEEcC
Confidence            77776664

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.28  E-value=0.0084  Score=45.25  Aligned_cols=118  Identities=16%  Similarity=0.145  Sum_probs=70.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc-C--CEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           30 LTAIVTGASSGIGTETARVLALR-G--VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~-G--~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      +++.|+|++|.+|.++|..|+.+ +  ..+++.+.++ ..+.....+.......... ....-.+.+.    ++      
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~-~~~~~~~~~~----~~------   68 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIK-GFSGEDATPA----LE------   68 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEE-EECSSCCHHH----HT------
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCc-EEEcCCCccc----cC------
Confidence            36889999999999999988753 4  5799999764 4444444555431111121 1222223221    22      


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                       .-|++|.++|....+.    +.-.+.+..|..    +.+.+.+.+.+.    .+++.++++|...
T Consensus        69 -~aDvvvitaG~~~k~g----~~R~dl~~~N~~----i~~~v~~~i~~~----~p~aivivvtNPv  121 (145)
T d2cmda1          69 -GADVVLISAGVRRKPG----MDRSDLFNVNAG----IVKNLVQQVAKT----CPKACIGIITNPV  121 (145)
T ss_dssp             -TCSEEEECCSCCCCTT----CCGGGGHHHHHH----HHHHHHHHHHHH----CTTSEEEECSSSH
T ss_pred             -CCCEEEECCCccCCCC----cchhhHHHHHHH----HHHHHHHHHHhh----CCCcEEEEccCCc
Confidence             5699999999754432    233444566644    445555555554    4467788887755

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.27  E-value=0.0026  Score=48.21  Aligned_cols=114  Identities=17%  Similarity=0.201  Sum_probs=67.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCch--hHHHHHHHHHHhC--CCC--ceEEEEccCCCHHHHHHHHHHH
Q 021391           31 TAIVTGASSGIGTETARVLALRGV--HVIMAVRNMA--AGKDVREAIVKEI--PSA--KVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~--~~~~~~~~l~~~~--~~~--~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      ++.|.||+|.+|.++|..|+.+|.  .+++.++++.  +++....++....  ...  ++.....+  +.+         
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~--d~~---------   70 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDE--NLR---------   70 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETT--CGG---------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcc--hHH---------
Confidence            589999999999999999999994  8999998753  3444455555321  111  22222221  111         


Q ss_pred             hhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECC
Q 021391          103 NSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSS  170 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS  170 (313)
                        ....-|++|.+||....+..    .-...+..|..    +.+.+.+.+.+..     +..|+.+|-
T Consensus        71 --~l~~aDvVVitAG~~~~~g~----sR~dl~~~Na~----iv~~i~~~i~~~~-----~~~iivVtN  123 (145)
T d1hyea1          71 --IIDESDVVIITSGVPRKEGM----SRMDLAKTNAK----IVGKYAKKIAEIC-----DTKIFVITN  123 (145)
T ss_dssp             --GGTTCSEEEECCSCCCCTTC----CHHHHHHHHHH----HHHHHHHHHHHHC-----CCEEEECSS
T ss_pred             --HhccceEEEEecccccCCCC----ChhhhhhhhHH----HHHHHHHHHhccC-----CCeEEEEcC
Confidence              12368999999997543322    23344555554    4455555555532     234555543

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.27  E-value=0.0024  Score=48.24  Aligned_cols=116  Identities=13%  Similarity=0.107  Sum_probs=72.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--EEEEEecC--chhHHHHHHHHHHhC-CCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           31 TAIVTGASSGIGTETARVLALRGV--HVIMAVRN--MAAGKDVREAIVKEI-PSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G~--~V~l~~r~--~~~~~~~~~~l~~~~-~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      ++.|+||+|.+|.++|..|+.+|.  .+++.+.+  .+..+....++.... ..........|..+              
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~~--------------   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYED--------------   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGG--------------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHHH--------------
Confidence            578999999999999999999986  69999864  334444444554321 12334444444321              


Q ss_pred             CCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391          106 GRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                      ...-|++|.+||....+.    +.-.+.++.|.    .+.+.+.+.+.+.    ..++.++++|-..
T Consensus        68 ~~~aDiVvitaG~~~~~g----~~R~dl~~~N~----~I~~~i~~~i~~~----~p~~i~ivvtNPv  122 (142)
T d1o6za1          68 TAGSDVVVITAGIPRQPG----QTRIDLAGDNA----PIMEDIQSSLDEH----NDDYISLTTSNPV  122 (142)
T ss_dssp             GTTCSEEEECCCCCCCTT----CCHHHHHHHHH----HHHHHHHHHHHTT----CSCCEEEECCSSH
T ss_pred             hhhcCEEEEecccccccC----CchhhHHHHHH----HHHHHHHHHHHhc----CCCceEEEecChH
Confidence            136899999999754432    22334455554    3556666776664    3467777776544

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.27  E-value=0.0015  Score=50.07  Aligned_cols=119  Identities=12%  Similarity=0.031  Sum_probs=67.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC---------EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHH
Q 021391           30 LTAIVTGASSGIGTETARVLALRGV---------HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFAS  100 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~---------~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~  100 (313)
                      .+|.|+||+|.+|..++..|+..+.         +++..+++.++.+....++.... ......+...-.+.+       
T Consensus         5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-------   76 (154)
T d1y7ta1           5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCA-FPLLAGLEATDDPKV-------   76 (154)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT-CTTEEEEEEESCHHH-------
T ss_pred             CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccc-cccccccccCCchhh-------
Confidence            3899999999999999999998753         23334455555665555544432 122333333222211       


Q ss_pred             HHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCc
Q 021391          101 EYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSE  171 (313)
Q Consensus       101 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~  171 (313)
                          .+...|++|.++|....+.    +.-.+.+..|+.    +.+.+.+.+.+.+   .+.+.|+++|..
T Consensus        77 ----~~~~advViitaG~~~~pg----~~r~dl~~~N~~----i~~~~~~~i~k~a---~~~~~vivvsNP  132 (154)
T d1y7ta1          77 ----AFKDADYALLVGAAPRKAG----MERRDLLQVNGK----IFTEQGRALAEVA---KKDVKVLVVGNP  132 (154)
T ss_dssp             ----HTTTCSEEEECCCCCCCTT----CCHHHHHHHHHH----HHHHHHHHHHHHS---CTTCEEEECSSS
T ss_pred             ----hcccccEEEeecCcCCCCC----CcHHHHHHHHHH----HHHHHHHHHHHhC---CCCcEEEEecCc
Confidence                1237899999999864422    122333444443    4555555655542   224566666653

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.26  E-value=0.00017  Score=57.01  Aligned_cols=82  Identities=17%  Similarity=0.189  Sum_probs=58.5

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEE-ccCCCHHHHHHHHHHH
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAME-LDVSSLASVRKFASEY  102 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~-~D~s~~~~v~~~~~~~  102 (313)
                      ..+++||+|||.|+ ||.+++++..|.+.| +|.++.|+.++.+++.+.+...........+. .|+.+           
T Consensus        13 ~~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~-----------   79 (177)
T d1nvta1          13 IGRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDV-----------   79 (177)
T ss_dssp             HCCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTC-----------
T ss_pred             CCCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhhhhh-----------
Confidence            45689999999987 578999999998777 99999999999999888886553322111111 11111           


Q ss_pred             hhcCCCeeEEEEcccCCC
Q 021391          103 NSQGRPLNILINNAGIMA  120 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~  120 (313)
                        .....|++||+.....
T Consensus        80 --~~~~~dliIn~tp~g~   95 (177)
T d1nvta1          80 --DLDGVDIIINATPIGM   95 (177)
T ss_dssp             --CCTTCCEEEECSCTTC
T ss_pred             --ccchhhhhccCCcccc
Confidence              1236899999986543

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.22  E-value=0.00082  Score=52.35  Aligned_cols=45  Identities=18%  Similarity=0.333  Sum_probs=39.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHH
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAI   73 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l   73 (313)
                      ++|.|||.|+ ||.+++++..|.+.|+ +|.++.|+.++.+.+.+.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            6789999988 8999999999999998 7999999998877765543

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.22  E-value=0.0057  Score=46.10  Aligned_cols=115  Identities=13%  Similarity=0.087  Sum_probs=71.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHh--CCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           31 TAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKE--IPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      ++.|.|+ |.+|.++|..|+.+|.  .+++.++++++++.....+...  ..+........|..+.              
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~~~~--------------   67 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEIC--------------   67 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGG--------------
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCHHHh--------------
Confidence            4667797 9999999999999986  7999999988777666666542  1122222222222221              


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                      ..-|++|.++|....+. .+   -.+.+..|.    .+++.+.+.+.+.    ..++-++++|-..
T Consensus        68 ~daDvVVitaG~~~~~g-~~---R~dl~~~N~----~i~~~i~~~i~~~----~p~ai~ivvtNPv  121 (143)
T d1llda1          68 RDADMVVITAGPRQKPG-QS---RLELVGATV----NILKAIMPNLVKV----APNAIYMLITNPV  121 (143)
T ss_dssp             TTCSEEEECCCCCCCTT-CC---HHHHHHHHH----HHHHHHHHHHHHH----CTTSEEEECCSSH
T ss_pred             hCCcEEEEecccccCCC-Cc---hhhhhhhhH----HHHHHHHHHHHhh----CCCeEEEEeCCch
Confidence            25799999999754332 12   223455555    4555666666664    3456667766544

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.21  E-value=0.0013  Score=51.10  Aligned_cols=76  Identities=14%  Similarity=0.187  Sum_probs=51.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .|.+++|.|+ |++|...++.+...|++|+++++++++.+.+. ++     +....+...+-.+  .    .   .+..+
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~-~l-----Ga~~~i~~~~~~~--~----~---~~~~~   90 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KM-----GADHYIATLEEGD--W----G---EKYFD   90 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HH-----TCSEEEEGGGTSC--H----H---HHSCS
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhh-cc-----CCcEEeeccchHH--H----H---Hhhhc
Confidence            6899999987 89999988877788999999999988776543 33     3322221122211  1    1   12335


Q ss_pred             CeeEEEEcccCC
Q 021391          108 PLNILINNAGIM  119 (313)
Q Consensus       108 ~id~lv~~ag~~  119 (313)
                      ..|+++.+.|..
T Consensus        91 ~~d~vi~~~~~~  102 (168)
T d1piwa2          91 TFDLIVVCASSL  102 (168)
T ss_dssp             CEEEEEECCSCS
T ss_pred             ccceEEEEecCC
Confidence            799999998753

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.20  E-value=0.00051  Score=53.84  Aligned_cols=80  Identities=18%  Similarity=0.168  Sum_probs=54.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      +|.+|||.|+ +|+|...+..+...|+ +|+++++++++.+...+ +     +....+...|-  .+.+....+..  ..
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~-~-----Ga~~~i~~~~~--~~~~~~~~~~~--~~   96 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE-V-----GATECVNPQDY--KKPIQEVLTEM--SN   96 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-T-----TCSEEECGGGC--SSCHHHHHHHH--TT
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH-h-----CCeeEEecCCc--hhHHHHHHHHH--hc
Confidence            7899999999 6899999999999986 89999999888765432 1     22211111122  22344444433  23


Q ss_pred             CCeeEEEEcccC
Q 021391          107 RPLNILINNAGI  118 (313)
Q Consensus       107 g~id~lv~~ag~  118 (313)
                      +++|++|.+.|.
T Consensus        97 ~G~D~vid~~G~  108 (176)
T d2jhfa2          97 GGVDFSFEVIGR  108 (176)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEecCCc
Confidence            579999999985

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.19  E-value=0.0072  Score=45.92  Aligned_cols=121  Identities=12%  Similarity=0.112  Sum_probs=75.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHh--CCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           30 LTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKE--IPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      .++.|.|+ |++|.++|..|+.++. .++|.+++++.++.....+...  ...........+  +.+           ..
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~~-----------~~   69 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TYD-----------DL   69 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CGG-----------GG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--ccc-----------cc
Confidence            46778896 8999999998888886 7999999988777666666432  112233333322  111           12


Q ss_pred             CCeeEEEEcccCCCCCCcc-CccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391          107 RPLNILINNAGIMASPFML-SKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                      ..-|++|.++|....+... ....-...+..|.    -+++.+.+.+.+.    ..++-++++|-..
T Consensus        70 ~~advvvitag~~~~~g~~~~~~~R~~l~~~N~----~iv~~i~~~i~~~----~p~aivivvtNPv  128 (150)
T d1t2da1          70 AGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNN----KIMIEIGGHIKKN----CPNAFIIVVTNPV  128 (150)
T ss_dssp             TTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHH----HHHHHHHHHHHHH----CTTSEEEECSSSH
T ss_pred             CCCcEEEEecccccCCCCCccccchhHHHHHHH----HHHHHHHHHHHhc----CCCeEEEEecCch
Confidence            3689999999976554322 1122333455554    4556666666664    3467777777654

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.16  E-value=0.0016  Score=49.25  Aligned_cols=116  Identities=16%  Similarity=0.175  Sum_probs=66.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHhCCC-CceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           30 LTAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKEIPS-AKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      +++.|.|+ |.+|.+++..|+.+|.  .+++.+++++.++....++....+- ........|   .+           ..
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~---~~-----------~~   66 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD---YS-----------DV   66 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C---GG-----------GG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc---HH-----------Hh
Confidence            34666697 9999999999999986  7999999987766656566542221 122221111   11           12


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                      ..-|++|.++|....+.    +.-...+..|.    .+++.+.+.+.+.    .+++-++++|-..
T Consensus        67 ~~adivvitag~~~~~~----~~r~~l~~~N~----~i~~~i~~~i~~~----~p~ai~ivvtNPv  120 (142)
T d1y6ja1          67 KDCDVIVVTAGANRKPG----ETRLDLAKKNV----MIAKEVTQNIMKY----YNHGVILVVSNPV  120 (142)
T ss_dssp             TTCSEEEECCCC----------CHHHHHHHHH----HHHHHHHHHHHHH----CCSCEEEECSSSH
T ss_pred             CCCceEEEecccccCcC----cchhHHhhHHH----HHHHHHHHHhhcc----CCCceEEEecChH
Confidence            36799999999754332    22334455554    4555666666664    3467777776543

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.16  E-value=0.0035  Score=49.03  Aligned_cols=119  Identities=11%  Similarity=-0.035  Sum_probs=67.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC---C----EEEEEecCc--hhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHH
Q 021391           30 LTAIVTGASSGIGTETARVLALRG---V----HVIMAVRNM--AAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFAS  100 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G---~----~V~l~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~  100 (313)
                      -+|.||||+|.||.+++..|++..   .    .+.+.+.+.  +.++...-++.......--..+..  ++..   .   
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~--~~~~---~---   96 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG--IDPY---E---   96 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE--SCHH---H---
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcccc--ccch---h---
Confidence            479999999999999999999753   2    455555543  334444444444321111111111  2221   1   


Q ss_pred             HHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCc
Q 021391          101 EYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSE  171 (313)
Q Consensus       101 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~  171 (313)
                          .+...|++|..+|....+.    +...+.+..|.    .+.+...+.+.+.+   .+...|+++|-.
T Consensus        97 ----~~~~aDvVvi~ag~~rkpg----~tR~Dll~~N~----~I~k~~~~~i~~~a---~~~~~vlvv~NP  152 (175)
T d7mdha1          97 ----VFEDVDWALLIGAKPRGPG----MERAALLDING----QIFADQGKALNAVA---SKNVKVLVVGNP  152 (175)
T ss_dssp             ----HTTTCSEEEECCCCCCCTT----CCHHHHHHHHH----HHHHHHHHHHHHHS---CTTCEEEECSSS
T ss_pred             ----hccCCceEEEeeccCCCCC----CcHHHHHHHHH----HHHHHHHHHHHhhC---CCCcEEEEecCc
Confidence                1347899999999864432    33344555554    35566666666643   224566666643

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.08  E-value=0.0013  Score=51.05  Aligned_cols=75  Identities=17%  Similarity=0.311  Sum_probs=53.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      -.|.+|+|.|+ |++|...++.+-..|+++++++++.++.+. .+++     +...   .+|..+.+..       ....
T Consensus        29 ~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~-a~~l-----Gad~---~i~~~~~~~~-------~~~~   91 (168)
T d1uufa2          29 GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREA-AKAL-----GADE---VVNSRNADEM-------AAHL   91 (168)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHH-----TCSE---EEETTCHHHH-------HTTT
T ss_pred             CCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHH-Hhcc-----CCcE---EEECchhhHH-------HHhc
Confidence            36899999986 899999998888899999999998877643 3444     3221   2355555432       2223


Q ss_pred             CCeeEEEEcccC
Q 021391          107 RPLNILINNAGI  118 (313)
Q Consensus       107 g~id~lv~~ag~  118 (313)
                      +++|+++.+.|.
T Consensus        92 ~~~D~vid~~g~  103 (168)
T d1uufa2          92 KSFDFILNTVAA  103 (168)
T ss_dssp             TCEEEEEECCSS
T ss_pred             CCCceeeeeeec
Confidence            479999999984

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.08  E-value=0.00023  Score=55.66  Aligned_cols=45  Identities=27%  Similarity=0.404  Sum_probs=38.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHH
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVR   70 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~   70 (313)
                      ..+|.+|||+||+||+|...++-.-..|++|+.++++.++.+.+.
T Consensus        21 ~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~   65 (167)
T d1tt7a2          21 SPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK   65 (167)
T ss_dssp             CGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH
T ss_pred             CCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHH
Confidence            345778999999999999999877788999999999988877654

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.06  E-value=0.00048  Score=54.12  Aligned_cols=79  Identities=18%  Similarity=0.202  Sum_probs=53.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      +|.+|+|.|+ |++|...++.+...|+ +|+++++++++.+.+. ++     +.. +  .+|..+.+-.+.+.+ +- ..
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~-~l-----Ga~-~--~i~~~~~~~~~~v~~-~t-~g   94 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK-FY-----GAT-D--ILNYKNGHIEDQVMK-LT-NG   94 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH-HH-----TCS-E--EECGGGSCHHHHHHH-HT-TT
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH-hh-----Ccc-c--cccccchhHHHHHHH-Hh-hc
Confidence            6889999986 8999999998888998 7999999887755543 33     321 2  234444333332222 21 12


Q ss_pred             CCeeEEEEcccC
Q 021391          107 RPLNILINNAGI  118 (313)
Q Consensus       107 g~id~lv~~ag~  118 (313)
                      .++|++|.++|.
T Consensus        95 ~G~D~vid~~g~  106 (174)
T d1jqba2          95 KGVDRVIMAGGG  106 (174)
T ss_dssp             SCEEEEEECSSC
T ss_pred             cCcceEEEccCC
Confidence            359999999984

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.05  E-value=0.0022  Score=50.18  Aligned_cols=81  Identities=19%  Similarity=0.167  Sum_probs=54.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      -.|.+|+|.|+ ||+|...+..+...|+ +|+++++++++++...+ +     +....+-.-|-.+.  .+...+..  .
T Consensus        28 ~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~-~-----GA~~~in~~~~~~~--~~~~~~~~--~   96 (176)
T d1d1ta2          28 KPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA-V-----GATECISPKDSTKP--ISEVLSEM--T   96 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-H-----TCSEEECGGGCSSC--HHHHHHHH--H
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHh-c-----CCcEEECccccchH--HHHHHHHh--c
Confidence            36899999986 8999999999999996 89999999998775443 3     33332222222221  22222211  2


Q ss_pred             CCCeeEEEEcccC
Q 021391          106 GRPLNILINNAGI  118 (313)
Q Consensus       106 ~g~id~lv~~ag~  118 (313)
                      .+++|++|.+.|.
T Consensus        97 g~G~d~vi~~~g~  109 (176)
T d1d1ta2          97 GNNVGYTFEVIGH  109 (176)
T ss_dssp             TSCCCEEEECSCC
T ss_pred             cccceEEEEeCCc
Confidence            3479999999984

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=97.04  E-value=0.0085  Score=44.97  Aligned_cols=116  Identities=20%  Similarity=0.155  Sum_probs=69.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHhC--CCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           31 TAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKEI--PSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      ++.|+|| |.+|.+++..|+.+|.  .+++.+++++.++.....+....  ..........  .+.+.           .
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~-----------~   67 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYAD-----------T   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHH-----------h
Confidence            5778896 8999999999999984  89999999887765554443211  0112222222  12211           1


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                      ...|++|.++|....+..    .-...+..|..    +.+.+.+.+.+.    .+++-++++|-..
T Consensus        68 ~dadvvvitag~~~~~g~----~r~~l~~~N~~----i~~~i~~~i~~~----~p~aivivvtNPv  121 (142)
T d1guza1          68 ANSDIVIITAGLPRKPGM----TREDLLMKNAG----IVKEVTDNIMKH----SKNPIIIVVSNPL  121 (142)
T ss_dssp             TTCSEEEECCSCCCCTTC----CHHHHHHHHHH----HHHHHHHHHHHH----CSSCEEEECCSSH
T ss_pred             cCCeEEEEEEecCCCCCC----chHHHHHHHHH----HHHHHHHHhhcc----CCCeEEEEecCCh
Confidence            367999999997544321    12233444443    445555555554    3466777766544

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.02  E-value=0.008  Score=45.19  Aligned_cols=115  Identities=14%  Similarity=0.074  Sum_probs=71.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHhC--CCCceEEE-EccCCCHHHHHHHHHHHhhc
Q 021391           31 TAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKEI--PSAKVDAM-ELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~~--~~~~~~~~-~~D~s~~~~v~~~~~~~~~~  105 (313)
                      ++.|.|+ |.+|.++|..|+.+|.  .+++.+++++.++.....+....  ........ ..|..+.             
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~~~~-------------   67 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLL-------------   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGGGG-------------
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCHHHh-------------
Confidence            5777896 9999999999999886  69999999888776666665421  11222222 2233221             


Q ss_pred             CCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391          106 GRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                       ..-|++|..+|....+.    ..-...+..|.    .+.+.+.+.+.+.    ..++.++++|-..
T Consensus        68 -~~adiVvitag~~~~~g----~~r~~l~~~n~----~i~~~i~~~i~~~----~p~aivivvtNPv  121 (142)
T d1ojua1          68 -KGSEIIVVTAGLARKPG----MTRLDLAHKNA----GIIKDIAKKIVEN----APESKILVVTNPM  121 (142)
T ss_dssp             -TTCSEEEECCCCCCCSS----CCHHHHHHHHH----HHHHHHHHHHHTT----STTCEEEECSSSH
T ss_pred             -ccccEEEEeccccCCCC----CchHHHHHHhh----HHHHHHHHHHHhh----CCCcEEEEecCCh
Confidence             26799999999654332    12223333333    3556666666664    3466777776644

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=97.01  E-value=0.00046  Score=55.29  Aligned_cols=80  Identities=18%  Similarity=0.123  Sum_probs=52.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      .|.+|+|.|+ |++|...+..+...|+ +|+++++++++++.+.+     . +..  . ..|-.+.+-.++ +.++ ...
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~-----~-Ga~--~-~~~~~~~~~~~~-i~~~-t~g   92 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA-----Q-GFE--I-ADLSLDTPLHEQ-IAAL-LGE   92 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-----T-TCE--E-EETTSSSCHHHH-HHHH-HSS
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhh-----c-ccc--E-EEeCCCcCHHHH-HHHH-hCC
Confidence            6899999986 7999888888777888 79999998777654332     1 222  2 233333332222 3332 233


Q ss_pred             CCeeEEEEcccCC
Q 021391          107 RPLNILINNAGIM  119 (313)
Q Consensus       107 g~id~lv~~ag~~  119 (313)
                      .+.|++|.+.|..
T Consensus        93 ~g~D~vid~vG~~  105 (195)
T d1kola2          93 PEVDCAVDAVGFE  105 (195)
T ss_dssp             SCEEEEEECCCTT
T ss_pred             CCcEEEEECcccc
Confidence            4799999999853

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.01  E-value=0.0046  Score=46.54  Aligned_cols=116  Identities=16%  Similarity=0.133  Sum_probs=70.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhC--CCCceEEE-EccCCCHHHHHHHHHHHhhc
Q 021391           30 LTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEI--PSAKVDAM-ELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~--~~~~~~~~-~~D~s~~~~v~~~~~~~~~~  105 (313)
                      |++.|.|+ |.+|.++|..|+.++. .+++.+.+++..+.....+....  .+...... .-|..+.             
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~~-------------   67 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYADT-------------   67 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGG-------------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHHh-------------
Confidence            56777796 9999999999999886 89999998877666555554210  01122222 2232222             


Q ss_pred             CCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCcc
Q 021391          106 GRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEA  172 (313)
Q Consensus       106 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~  172 (313)
                       ..-|++|.++|....+.. +   -.+.+..|.    .+++.+.+.+.+.    .+++.++++|-..
T Consensus        68 -~~advvvitag~~~~~~~-~---r~dl~~~N~----~i~~~i~~~i~k~----~p~aivivvtNPv  121 (142)
T d1uxja1          68 -ANSDVIVVTSGAPRKPGM-S---REDLIKVNA----DITRACISQAAPL----SPNAVIIMVNNPL  121 (142)
T ss_dssp             -TTCSEEEECCSCC-------------CHHHHH----HHHHHHHHHHGGG----CTTCEEEECSSSH
T ss_pred             -cCCCEEEEeeeccCCcCc-c---hhHHHhHHH----HHHHHHHHHHhcc----CCCceEEEeCCch
Confidence             257999999997654322 2   223334443    4667777777774    4467777766544

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.99  E-value=0.0022  Score=48.78  Aligned_cols=84  Identities=14%  Similarity=0.079  Sum_probs=57.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      ++.+-|++.|.||.|-+|..+|+.|.+.|+.|.+.+|+.....+...   .   +........   ...++...+.++..
T Consensus         5 ~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~---~---~~~~v~~~~---~~~~~~~v~~~~~~   75 (152)
T d2pv7a2           5 INSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESIL---A---NADVVIVSV---PINLTLETIERLKP   75 (152)
T ss_dssp             SCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHH---T---TCSEEEECS---CGGGHHHHHHHHGG
T ss_pred             cCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhh---h---hcccccccc---chhhheeeeecccc
Confidence            44455899999999999999999999999999999998766544321   1   334444333   34456666777765


Q ss_pred             cCCCeeEEEEccc
Q 021391          105 QGRPLNILINNAG  117 (313)
Q Consensus       105 ~~g~id~lv~~ag  117 (313)
                      ....=.+++..++
T Consensus        76 ~~~~~~iiiD~~S   88 (152)
T d2pv7a2          76 YLTENMLLADLTS   88 (152)
T ss_dssp             GCCTTSEEEECCS
T ss_pred             cccCCceEEEecc
Confidence            5433345555554

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.96  E-value=0.0005  Score=54.22  Aligned_cols=43  Identities=23%  Similarity=0.325  Sum_probs=37.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHH
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDV   69 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~   69 (313)
                      .++.++||+||+||+|...++-.-..|++|+.+++++++.+.+
T Consensus        30 ~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~   72 (177)
T d1o89a2          30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (177)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH
Confidence            3556999999999999999988888999999999998886544

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.92  E-value=0.0017  Score=50.76  Aligned_cols=79  Identities=13%  Similarity=0.144  Sum_probs=51.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCE-EEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVH-VIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~-V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      -.|.+++|.|+ |++|...+..+...|++ |+++++++++++.+ +++     +. .++  .|..+.+..+ .++++  .
T Consensus        27 ~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a-~~~-----Ga-~~~--i~~~~~~~~~-~i~~~--t   93 (174)
T d1f8fa2          27 TPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQL-----GA-THV--INSKTQDPVA-AIKEI--T   93 (174)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHH-----TC-SEE--EETTTSCHHH-HHHHH--T
T ss_pred             CCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHH-HHc-----CC-eEE--EeCCCcCHHH-HHHHH--c
Confidence            36889999997 89999999888888985 55667776665543 333     22 223  3444443322 23332  2


Q ss_pred             CCCeeEEEEcccC
Q 021391          106 GRPLNILINNAGI  118 (313)
Q Consensus       106 ~g~id~lv~~ag~  118 (313)
                      .+++|++|.+.|.
T Consensus        94 ~gg~D~vid~~G~  106 (174)
T d1f8fa2          94 DGGVNFALESTGS  106 (174)
T ss_dssp             TSCEEEEEECSCC
T ss_pred             CCCCcEEEEcCCc
Confidence            3579999999984

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.89  E-value=0.0031  Score=48.53  Aligned_cols=83  Identities=19%  Similarity=0.141  Sum_probs=54.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHH--------HhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           31 TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIV--------KEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~--------~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      ++.|.|+ |-+|.++|+.|.+.|++|++.+|+.+..+...+.-.        +......+.++.+   ...+++++++++
T Consensus         2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~~l   77 (165)
T d2f1ka2           2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLEKL   77 (165)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHHHH
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhhhh
Confidence            4667765 999999999999999999999999877665443210        0111223333322   356778888888


Q ss_pred             hhcCCCeeEEEEccc
Q 021391          103 NSQGRPLNILINNAG  117 (313)
Q Consensus       103 ~~~~g~id~lv~~ag  117 (313)
                      .....+=.++++..+
T Consensus        78 ~~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          78 IPHLSPTAIVTDVAS   92 (165)
T ss_dssp             GGGSCTTCEEEECCS
T ss_pred             hhhcccccceeeccc
Confidence            766544455666554

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.82  E-value=0.0014  Score=47.35  Aligned_cols=60  Identities=10%  Similarity=0.139  Sum_probs=43.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCC
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSS   91 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~   91 (313)
                      ++++||++||.|++. +|..-++.|++.|++|++++.......   ..+..   ..++.+..-++.+
T Consensus         8 l~l~~k~vlVvG~G~-va~~ka~~ll~~ga~v~v~~~~~~~~~---~~~~~---~~~i~~~~~~~~~   67 (113)
T d1pjqa1           8 CQLRDRDCLIVGGGD-VAERKARLLLEAGARLTVNALTFIPQF---TVWAN---EGMLTLVEGPFDE   67 (113)
T ss_dssp             ECCBTCEEEEECCSH-HHHHHHHHHHHTTBEEEEEESSCCHHH---HHHHT---TTSCEEEESSCCG
T ss_pred             EEeCCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEeccCChHH---HHHHh---cCCceeeccCCCH
Confidence            579999999999875 999999999999999999987654321   11222   2355666655544

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.79  E-value=0.0031  Score=48.59  Aligned_cols=76  Identities=16%  Similarity=0.132  Sum_probs=50.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .|.+++|.|+ |++|...+..+...|++|+.+++++++.+... ++     +.. ++  .|.++.+..+.+.+    ...
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~-~~-----Ga~-~~--i~~~~~~~~~~~~~----~~~   92 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELAR-KL-----GAS-LT--VNARQEDPVEAIQR----DIG   92 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HT-----TCS-EE--EETTTSCHHHHHHH----HHS
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhh-cc-----Ccc-cc--ccccchhHHHHHHH----hhc
Confidence            6899999886 99999999888889999999999987766433 22     222 22  34445444443333    223


Q ss_pred             CeeEEEEccc
Q 021391          108 PLNILINNAG  117 (313)
Q Consensus       108 ~id~lv~~ag  117 (313)
                      +.|.+|.+++
T Consensus        93 g~~~~i~~~~  102 (166)
T d1llua2          93 GAHGVLVTAV  102 (166)
T ss_dssp             SEEEEEECCS
T ss_pred             CCcccccccc
Confidence            4566666654

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.77  E-value=0.0006  Score=47.64  Aligned_cols=38  Identities=21%  Similarity=0.264  Sum_probs=34.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCch
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMA   64 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~   64 (313)
                      +++||+++|.|. |..|.++|+.|+++|++|++.+.+..
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            689999999998 66799999999999999999998553

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.73  E-value=0.0024  Score=49.68  Aligned_cols=80  Identities=14%  Similarity=0.140  Sum_probs=52.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCC-HHHHHHHHHHHhh
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSS-LASVRKFASEYNS  104 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~-~~~v~~~~~~~~~  104 (313)
                      -.|.++||.|+ +|+|...+..+...|+ +|+.+++++++.+. .+++     +... ++  |..+ .+.+...++..  
T Consensus        27 ~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~-ak~l-----Ga~~-~i--~~~~~~~~~~~~~~~~--   94 (176)
T d2fzwa2          27 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFAR-AKEF-----GATE-CI--NPQDFSKPIQEVLIEM--   94 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHH-HHHH-----TCSE-EE--CGGGCSSCHHHHHHHH--
T ss_pred             CCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHH-HHHh-----CCcE-EE--eCCchhhHHHHHHHHH--
Confidence            36899999998 5999999999999997 67777777776543 4444     3222 22  2221 22333434433  


Q ss_pred             cCCCeeEEEEcccC
Q 021391          105 QGRPLNILINNAGI  118 (313)
Q Consensus       105 ~~g~id~lv~~ag~  118 (313)
                      ..+++|++|.+.|.
T Consensus        95 ~~~g~D~vid~~G~  108 (176)
T d2fzwa2          95 TDGGVDYSFECIGN  108 (176)
T ss_dssp             TTSCBSEEEECSCC
T ss_pred             cCCCCcEeeecCCC
Confidence            23479999999984

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.72  E-value=0.0028  Score=49.28  Aligned_cols=79  Identities=19%  Similarity=0.248  Sum_probs=51.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      -.|.+++|.|+ |++|...+..+...|+ +|+++++++++++.+.+     . +. .+++  |-.+ +.++...+..  .
T Consensus        31 ~~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~-----~-ga-~~~i--~~~~-~~~~~~~~~~--~   97 (172)
T d1h2ba2          31 YPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER-----L-GA-DHVV--DARR-DPVKQVMELT--R   97 (172)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH-----T-TC-SEEE--ETTS-CHHHHHHHHT--T
T ss_pred             CCCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhh-----c-cc-ceee--cCcc-cHHHHHHHhh--C
Confidence            35899999986 9999999998888887 67778888766554332     1 22 2233  3222 2333333321  2


Q ss_pred             CCCeeEEEEcccC
Q 021391          106 GRPLNILINNAGI  118 (313)
Q Consensus       106 ~g~id~lv~~ag~  118 (313)
                      ..++|++|.++|.
T Consensus        98 ~~g~d~vid~~g~  110 (172)
T d1h2ba2          98 GRGVNVAMDFVGS  110 (172)
T ss_dssp             TCCEEEEEESSCC
T ss_pred             CCCceEEEEecCc
Confidence            2369999999984

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.69  E-value=0.0053  Score=47.79  Aligned_cols=80  Identities=16%  Similarity=0.200  Sum_probs=54.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHH-HHHHHHHHHhh
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLA-SVRKFASEYNS  104 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~-~v~~~~~~~~~  104 (313)
                      -.|.+|+|.|+ ||+|...+..+...|+ +|+.+++++++++.+.+ +     +.. .++  |.++.+ .+....+.  .
T Consensus        26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~-l-----Ga~-~~i--~~~~~d~~~~~~~~~--~   93 (174)
T d1p0fa2          26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-L-----GAT-ECL--NPKDYDKPIYEVICE--K   93 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-T-----TCS-EEE--CGGGCSSCHHHHHHH--H
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHH-c-----CCc-EEE--cCCCchhHHHHHHHH--h
Confidence            47899999986 8999999999999997 79999999888765432 2     322 222  322222 12233322  2


Q ss_pred             cCCCeeEEEEcccC
Q 021391          105 QGRPLNILINNAGI  118 (313)
Q Consensus       105 ~~g~id~lv~~ag~  118 (313)
                      ..++.|++|-+.|.
T Consensus        94 ~~~G~d~vid~~g~  107 (174)
T d1p0fa2          94 TNGGVDYAVECAGR  107 (174)
T ss_dssp             TTSCBSEEEECSCC
T ss_pred             cCCCCcEEEEcCCC
Confidence            33579999999984

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.68  E-value=0.00038  Score=56.07  Aligned_cols=44  Identities=23%  Similarity=0.281  Sum_probs=38.4

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHH
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDV   69 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~   69 (313)
                      .+++||+++|-| .|.+|+.+|+.|.+.|++|++.+.+.+.....
T Consensus        23 ~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~   66 (201)
T d1c1da1          23 GSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHA   66 (201)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHH
Confidence            369999999998 67799999999999999999999887665543

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.68  E-value=0.003  Score=49.38  Aligned_cols=81  Identities=19%  Similarity=0.202  Sum_probs=52.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      -.|.+|+|.|+ |+||...+..+...|+ +|+++++++++++.. +++     +.. .++...-.+ +.+....+..  .
T Consensus        27 ~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a-~~~-----Ga~-~~i~~~~~~-~~~~~~~~~~--~   95 (174)
T d1e3ia2          27 TPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-KAL-----GAT-DCLNPRELD-KPVQDVITEL--T   95 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHT-----TCS-EEECGGGCS-SCHHHHHHHH--H
T ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHH-HHh-----CCC-cccCCccch-hhhhhhHhhh--h
Confidence            36799999975 9999999999999999 688888888775433 332     222 222221111 1223333322  2


Q ss_pred             CCCeeEEEEcccC
Q 021391          106 GRPLNILINNAGI  118 (313)
Q Consensus       106 ~g~id~lv~~ag~  118 (313)
                      .+++|++|.+.|.
T Consensus        96 ~~G~d~vie~~G~  108 (174)
T d1e3ia2          96 AGGVDYSLDCAGT  108 (174)
T ss_dssp             TSCBSEEEESSCC
T ss_pred             cCCCcEEEEeccc
Confidence            3589999999984

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.54  E-value=0.012  Score=45.62  Aligned_cols=42  Identities=26%  Similarity=0.243  Sum_probs=36.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHH
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVRE   71 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~   71 (313)
                      .|++-|.|| |.+|.++|..|+++|++|.+.+|+++..+...+
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~   42 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD   42 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            478999998 899999999999999999999999877766543

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.53  E-value=0.014  Score=44.29  Aligned_cols=119  Identities=12%  Similarity=0.052  Sum_probs=64.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-------EEEEEecCc--hhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHH
Q 021391           30 LTAIVTGASSGIGTETARVLALRGV-------HVIMAVRNM--AAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFAS  100 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~-------~V~l~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~  100 (313)
                      .+|.|+||+|.+|.+++..|+..+.       .+++.+.+.  ++++....++..... .....+..  ++..  ...  
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~-~~~~~~~~--~~~~--~~~--   76 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCAL-PLLKDVIA--TDKE--EIA--   76 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCC-TTEEEEEE--ESCH--HHH--
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccc-cccccccc--Cccc--ccc--
Confidence            4799999999999999999987542       366665543  334444333333221 11211111  1111  111  


Q ss_pred             HHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCc
Q 021391          101 EYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSE  171 (313)
Q Consensus       101 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~  171 (313)
                           ....|++|.++|....+.. +.+   ..+..|.    .+.+...+.+.+.+   ...+.++.+|-.
T Consensus        77 -----~~~~dvVVitag~~~~~g~-sr~---dll~~N~----~i~k~~~~~i~k~a---~~~~~iivvsNP  131 (154)
T d5mdha1          77 -----FKDLDVAILVGSMPRRDGM-ERK---DLLKANV----KIFKCQGAALDKYA---KKSVKVIVVGNP  131 (154)
T ss_dssp             -----TTTCSEEEECCSCCCCTTC-CTT---TTHHHHH----HHHHHHHHHHHHHS---CTTCEEEECSSS
T ss_pred             -----cCCceEEEEecccCCCCCC-chh---HHHHHhH----HHHHHHHHHHHhhC---CCceEEEEecCc
Confidence                 2368999999997654332 222   2344444    45666666666642   223455566543

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.48  E-value=0.011  Score=46.03  Aligned_cols=85  Identities=16%  Similarity=0.147  Sum_probs=59.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHH---------------HHHhCCCCceEEEEccCCCHHH
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREA---------------IVKEIPSAKVDAMELDVSSLAS   94 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~---------------l~~~~~~~~~~~~~~D~s~~~~   94 (313)
                      +.|-|.|- |-+|..+|+.|++.|++|++.+|++++.+++.+.               +....  .....+...+.+.+.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~--~~~~~ii~~~~~~~~   79 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKL--KKPRRIILLVKAGQA   79 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHB--CSSCEEEECSCTTHH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhh--cccceEEEecCchHH
Confidence            34556665 8999999999999999999999999888776542               11111  123455556777778


Q ss_pred             HHHHHHHHhhcCCCeeEEEEccc
Q 021391           95 VRKFASEYNSQGRPLNILINNAG  117 (313)
Q Consensus        95 v~~~~~~~~~~~g~id~lv~~ag  117 (313)
                      +....+.+.....+=+++|.+..
T Consensus        80 v~~v~~~l~~~~~~g~iiid~sT  102 (176)
T d2pgda2          80 VDNFIEKLVPLLDIGDIIIDGGN  102 (176)
T ss_dssp             HHHHHHHHHHHCCTTCEEEECSC
T ss_pred             HHHHHHHHHhccccCcEEEecCc
Confidence            88888777665544467776664

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.48  E-value=0.0055  Score=46.46  Aligned_cols=76  Identities=17%  Similarity=0.126  Sum_probs=57.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCee
Q 021391           31 TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLN  110 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~id  110 (313)
                      .++|.|. +.+|+.+++.|.++|..|++++.+++......++..    ...+.++..|.++++..+++--      ...|
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~----~~~~~vi~Gd~~d~~~L~~a~i------~~a~   73 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL----GDNADVIPGDSNDSSVLKKAGI------DRCR   73 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH----CTTCEEEESCTTSHHHHHHHTT------TTCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhh----cCCcEEEEccCcchHHHHHhcc------ccCC
Confidence            3677777 699999999999999999999998876665555443    3368889999999876544321      2567


Q ss_pred             EEEEccc
Q 021391          111 ILINNAG  117 (313)
Q Consensus       111 ~lv~~ag  117 (313)
                      .+|.+.+
T Consensus        74 ~vi~~~~   80 (153)
T d1id1a_          74 AILALSD   80 (153)
T ss_dssp             EEEECSS
T ss_pred             EEEEccc
Confidence            8887763

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.42  E-value=0.0058  Score=46.87  Aligned_cols=41  Identities=15%  Similarity=0.145  Sum_probs=35.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHH
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDV   69 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~   69 (313)
                      .|.++||.|+ |++|...+..+...|++|+++++++++.+.+
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~   67 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA   67 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhh
Confidence            6789999975 8999999888889999999999998776643

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.27  E-value=0.004  Score=49.41  Aligned_cols=44  Identities=20%  Similarity=0.224  Sum_probs=38.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHH
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIV   74 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~   74 (313)
                      |+|.|.|| |-+|..+|..++..|+.|++.+++++.++...+.+.
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~   48 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIE   48 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHH
Confidence            78999999 779999999999999999999999987776666554

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.25  E-value=0.013  Score=45.18  Aligned_cols=80  Identities=15%  Similarity=0.176  Sum_probs=51.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHH-HHHHHHHHHhh
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLA-SVRKFASEYNS  104 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~-~v~~~~~~~~~  104 (313)
                      -.|.+++|.|+ +|+|...+..++..|. +|+.+++++++++.+.+ +     +.. +++  |.++.+ .+++..+..  
T Consensus        27 k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~-~-----GAd-~~i--n~~~~~~~~~~~~~~~--   94 (175)
T d1cdoa2          27 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV-F-----GAT-DFV--NPNDHSEPISQVLSKM--   94 (175)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-T-----TCC-EEE--CGGGCSSCHHHHHHHH--
T ss_pred             CCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHH-c-----CCc-EEE--cCCCcchhHHHHHHhh--
Confidence            37899999986 6788888888888887 78889999887765432 2     322 222  322221 122222222  


Q ss_pred             cCCCeeEEEEcccC
Q 021391          105 QGRPLNILINNAGI  118 (313)
Q Consensus       105 ~~g~id~lv~~ag~  118 (313)
                      ..+++|+++.+.|.
T Consensus        95 ~~~G~d~vid~~G~  108 (175)
T d1cdoa2          95 TNGGVDFSLECVGN  108 (175)
T ss_dssp             HTSCBSEEEECSCC
T ss_pred             ccCCcceeeeecCC
Confidence            23479999999984

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=95.99  E-value=0.015  Score=47.74  Aligned_cols=81  Identities=12%  Similarity=0.260  Sum_probs=57.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecC-------------------chhHHHHHHHHHHhCCCCceEEEE
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRN-------------------MAAGKDVREAIVKEIPSAKVDAME   86 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~   86 (313)
                      +++++|+|.| .||+|..++..|+..|. ++.++|.+                   ..+.+.+.+.+.+.+|..++..+.
T Consensus        28 L~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~  106 (247)
T d1jw9b_          28 LKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN  106 (247)
T ss_dssp             HHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhh
Confidence            6789999999 67899999999999999 79998764                   235666677777777766666655


Q ss_pred             ccCCCHHHHHHHHHHHhhcCCCeeEEEEcc
Q 021391           87 LDVSSLASVRKFASEYNSQGRPLNILINNA  116 (313)
Q Consensus        87 ~D~s~~~~v~~~~~~~~~~~g~id~lv~~a  116 (313)
                      ..+++.. .....+       ..|++|.+.
T Consensus       107 ~~~~~~~-~~~~~~-------~~divid~~  128 (247)
T d1jw9b_         107 ALLDDAE-LAALIA-------EHDLVLDCT  128 (247)
T ss_dssp             SCCCHHH-HHHHHH-------TSSEEEECC
T ss_pred             hhhhhcc-cccccc-------ccceeeecc
Confidence            5554433 333332       567777665

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.97  E-value=0.011  Score=45.79  Aligned_cols=41  Identities=29%  Similarity=0.243  Sum_probs=37.0

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecC
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRN   62 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~   62 (313)
                      ....+++||.++|.|-|.=+|+-++..|+++|++|..+..+
T Consensus        22 ~~g~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          22 PEGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             CTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             cccCCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            34568999999999999999999999999999999988754

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.87  E-value=0.0091  Score=45.69  Aligned_cols=85  Identities=19%  Similarity=0.196  Sum_probs=53.2

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCC-----CCceEEEEccCCCHHHHHHHHH---HHh
Q 021391           32 AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIP-----SAKVDAMELDVSSLASVRKFAS---EYN  103 (313)
Q Consensus        32 ~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~~D~s~~~~v~~~~~---~~~  103 (313)
                      |-|.| .|-+|..+|+.|++.|++|++.+|++++.++..+.-.....     ..+...+.+-+.+.++++.++.   .+.
T Consensus         3 IgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~~   81 (161)
T d1vpda2           3 VGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGII   81 (161)
T ss_dssp             EEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHH
T ss_pred             EEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcchh
Confidence            44554 58999999999999999999999998887765442100000     0124455566677777777652   233


Q ss_pred             hcCCCeeEEEEccc
Q 021391          104 SQGRPLNILINNAG  117 (313)
Q Consensus       104 ~~~g~id~lv~~ag  117 (313)
                      ....+=+++|.+..
T Consensus        82 ~~~~~g~iiid~sT   95 (161)
T d1vpda2          82 EGAKPGTVLIDMSS   95 (161)
T ss_dssp             HHCCTTCEEEECSC
T ss_pred             hccCCCCEEEECCC
Confidence            33333355665553

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.86  E-value=0.0044  Score=55.46  Aligned_cols=80  Identities=19%  Similarity=0.290  Sum_probs=56.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCc-------------------hhHHHHHHHHHHhCCCCceEEEE
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNM-------------------AAGKDVREAIVKEIPSAKVDAME   86 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~   86 (313)
                      +++.+|||.|+ ||+|..+++.|+..|. ++.++|.+.                   .+.+.+.+.+...+|..++..+.
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~  113 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHF  113 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEC
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeee
Confidence            56788999999 6799999999999999 799988752                   25555666666666666666666


Q ss_pred             ccCCCHHHHHHHHHHHhhcCCCeeEEEEcc
Q 021391           87 LDVSSLASVRKFASEYNSQGRPLNILINNA  116 (313)
Q Consensus        87 ~D~s~~~~v~~~~~~~~~~~g~id~lv~~a  116 (313)
                      .++.+..  ..+++       ..|+||.+.
T Consensus       114 ~~i~~~~--~~~~~-------~~DlVi~~~  134 (426)
T d1yovb1         114 NKIQDFN--DTFYR-------QFHIIVCGL  134 (426)
T ss_dssp             SCGGGBC--HHHHT-------TCSEEEECC
T ss_pred             ccccchH--HHHHH-------hcchheecc
Confidence            6665432  12222       467777654

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.75  E-value=0.0054  Score=48.37  Aligned_cols=44  Identities=23%  Similarity=0.123  Sum_probs=38.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHH
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIV   74 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~   74 (313)
                      |+|.|.|| |-+|..+|..++..|++|++.+++.+.++...+.+.
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~   48 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAA   48 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhh
Confidence            56888998 789999999999999999999999988777666554

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.74  E-value=0.011  Score=45.50  Aligned_cols=45  Identities=31%  Similarity=0.355  Sum_probs=39.4

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGK   67 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~   67 (313)
                      ...+++||+++|.|-|.-+|+-++..|.++|++|.++........
T Consensus        31 y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~   75 (166)
T d1b0aa1          31 YNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLR   75 (166)
T ss_dssp             TTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHH
T ss_pred             cCcccccceEEEEeccccccHHHHHHHHHhhccccccccccchhH
Confidence            567899999999999999999999999999999998876554433

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.63  E-value=0.05  Score=46.45  Aligned_cols=135  Identities=13%  Similarity=0.123  Sum_probs=80.1

Q ss_pred             CCCCCCccchhccCCCC-CCCEEEEeCCCCc-hHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEc
Q 021391           11 GFSASSTAEEVTQGIDG-TGLTAIVTGASSG-IGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMEL   87 (313)
Q Consensus        11 ~~~~~~~~~~~~~~~~~-~gk~~lItGas~g-iG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~   87 (313)
                      +|..-+..........+ .|++||=.|+..| ++.    .++..|+ +|+.++.+++.++.+.+.+...+-..++.++..
T Consensus       127 G~flDqr~~r~~~~~~~~~g~~VLDl~~g~G~~si----~~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~  202 (324)
T d2as0a2         127 GFFLDQRENRLALEKWVQPGDRVLDVFTYTGGFAI----HAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVG  202 (324)
T ss_dssp             CCCSTTHHHHHHHGGGCCTTCEEEETTCTTTHHHH----HHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES
T ss_pred             CcccchhhHHHHHHhhcCCCCeeecccCcccchhh----hhhhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeec
Confidence            44444444333322223 5899997777644 333    3456677 799999999988888777766543456788887


Q ss_pred             cCCCHHHHHHHHHHHhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEE
Q 021391           88 DVSSLASVRKFASEYNSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVN  167 (313)
Q Consensus        88 D~s~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~  167 (313)
                      |+.+      ..+.......+.|++|.++.....    +..+...    .......+++.+.+.+++       +|.+++
T Consensus       203 d~~~------~~~~~~~~~~~fD~Vi~DpP~~~~----~~~~~~~----~~~~y~~l~~~a~~ll~p-------GG~lv~  261 (324)
T d2as0a2         203 SAFE------EMEKLQKKGEKFDIVVLDPPAFVQ----HEKDLKA----GLRAYFNVNFAGLNLVKD-------GGILVT  261 (324)
T ss_dssp             CHHH------HHHHHHHTTCCEEEEEECCCCSCS----SGGGHHH----HHHHHHHHHHHHHTTEEE-------EEEEEE
T ss_pred             hhhh------hhHHHHhccCCCCchhcCCccccC----CHHHHHH----HHHHHHHHHHHHHHHcCC-------CcEEEE
Confidence            7643      234444455689999998753322    2222221    223344456666666544       677666


Q ss_pred             ECC
Q 021391          168 VSS  170 (313)
Q Consensus       168 isS  170 (313)
                      .|.
T Consensus       262 ~s~  264 (324)
T d2as0a2         262 CSC  264 (324)
T ss_dssp             EEC
T ss_pred             EeC
Confidence            653

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.62  E-value=0.0097  Score=46.07  Aligned_cols=45  Identities=22%  Similarity=0.245  Sum_probs=40.1

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGK   67 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~   67 (313)
                      ..++++||+++|.|.|.-+|+-++..|+++|++|.++........
T Consensus        33 ~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~   77 (170)
T d1a4ia1          33 TGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD   77 (170)
T ss_dssp             TTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH
T ss_pred             hCcccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHH
Confidence            567899999999999999999999999999999999987655443

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.52  E-value=0.026  Score=44.02  Aligned_cols=38  Identities=29%  Similarity=0.266  Sum_probs=34.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCch
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMA   64 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~   64 (313)
                      .+.||++.|.|.+. ||+.+++.+...|++|+..+|...
T Consensus        39 ~l~gk~vgIiG~G~-IG~~va~~l~~~g~~v~~~d~~~~   76 (181)
T d1qp8a1          39 LIQGEKVAVLGLGE-IGTRVGKILAALGAQVRGFSRTPK   76 (181)
T ss_dssp             CCTTCEEEEESCST-HHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccCceEEEecccc-ccccceeeeecccccccccccccc
Confidence            48999999999876 999999999999999999998753

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.49  E-value=0.042  Score=43.49  Aligned_cols=79  Identities=23%  Similarity=0.149  Sum_probs=58.2

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      ..-+++|++||=-|++.|.   ++..++.+|+ +|+.++.++..++.+.+.+...  +.+..++..|+.+.         
T Consensus        41 ~~~dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~--~~~~~~~~~d~~~~---------  106 (201)
T d1wy7a1          41 SLGDIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLGEF--KGKFKVFIGDVSEF---------  106 (201)
T ss_dssp             HTTSSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGG--TTSEEEEESCGGGC---------
T ss_pred             hcCCCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHc--CCCceEEECchhhh---------
Confidence            4556899999988888772   3444567886 8999999988877776665443  55778888886543         


Q ss_pred             HhhcCCCeeEEEEcccCC
Q 021391          102 YNSQGRPLNILINNAGIM  119 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~  119 (313)
                          .+++|++|.|+-+.
T Consensus       107 ----~~~fD~Vi~nPP~~  120 (201)
T d1wy7a1         107 ----NSRVDIVIMNPPFG  120 (201)
T ss_dssp             ----CCCCSEEEECCCCS
T ss_pred             ----CCcCcEEEEcCccc
Confidence                35799999998653

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.48  E-value=0.0042  Score=47.07  Aligned_cols=39  Identities=10%  Similarity=0.146  Sum_probs=34.3

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecC
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRN   62 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~   62 (313)
                      .-+.++||++||.|| |.+|..-++.|++.|++|++++..
T Consensus         7 l~~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           7 LAHQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             EEECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             hheeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            445689999999999 559999999999999999999754

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.46  E-value=0.02  Score=42.06  Aligned_cols=75  Identities=16%  Similarity=0.249  Sum_probs=55.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEE-ecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMA-VRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      +++.|.|++|-+|+++++.+.++|+.++.. +++....          ....   =+..|+|.++.+...++.+.+.  +
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~~----------~~~~---DVvIDFS~p~~~~~~l~~~~~~--~   65 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVEE----------LDSP---DVVIDFSSPEALPKTVDLCKKY--R   65 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEEE----------CSCC---SEEEECSCGGGHHHHHHHHHHH--T
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHHH----------hccC---CEEEEecCHHHHHHHHHHHHhc--C
Confidence            368999999999999999999999986654 4443211          0111   2577999999999999988766  4


Q ss_pred             eeEEEEcccCC
Q 021391          109 LNILINNAGIM  119 (313)
Q Consensus       109 id~lv~~ag~~  119 (313)
                      +-+|+-..|..
T Consensus        66 ~p~ViGTTG~~   76 (128)
T d1vm6a3          66 AGLVLGTTALK   76 (128)
T ss_dssp             CEEEECCCSCC
T ss_pred             CCEEEEcCCCC
Confidence            66788777753

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.40  E-value=0.022  Score=44.60  Aligned_cols=42  Identities=26%  Similarity=0.228  Sum_probs=36.6

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchh
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAA   65 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~   65 (313)
                      ....+.||++.|.| .|.||+++++.+...|.+|+..++....
T Consensus        38 ~~~~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~   79 (184)
T d1ygya1          38 SGTEIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSP   79 (184)
T ss_dssp             CBCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred             ccccccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCCh
Confidence            45678999999998 6899999999999999999999987554

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.34  E-value=0.063  Score=38.19  Aligned_cols=74  Identities=16%  Similarity=0.156  Sum_probs=56.6

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      +.-.+.++.|.| +|=+|+-++....+.|+++++.+.+.+....          ...-.++..|..|.+.+..++.+.  
T Consensus         7 ~~~~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~----------~va~~~i~~~~~d~~~l~~~~~~~--   73 (111)
T d1kjqa2           7 LRPAATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAM----------HVAHRSHVINMLDGDALRRVVELE--   73 (111)
T ss_dssp             TSTTCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGG----------GGSSEEEECCTTCHHHHHHHHHHH--
T ss_pred             CCCCCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchh----------hcCCeEEECCCCCHHHHHHHHHhh--
Confidence            344567899999 5679999999999999999999987643221          112357889999999999888765  


Q ss_pred             cCCCeeEEEE
Q 021391          105 QGRPLNILIN  114 (313)
Q Consensus       105 ~~g~id~lv~  114 (313)
                         .+|++..
T Consensus        74 ---~~DviT~   80 (111)
T d1kjqa2          74 ---KPHYIVP   80 (111)
T ss_dssp             ---CCSEEEE
T ss_pred             ---CCceEEE
Confidence               6788854

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=95.22  E-value=0.051  Score=41.87  Aligned_cols=78  Identities=15%  Similarity=0.059  Sum_probs=53.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhC-----------CCCceEEEEccCCCHHHH
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEI-----------PSAKVDAMELDVSSLASV   95 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~-----------~~~~~~~~~~D~s~~~~v   95 (313)
                      .+|.+||..|++.|   ..+..||++|++|+.++.+++..+.+.+......           .+....++..|..+....
T Consensus        19 ~~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~   95 (201)
T d1pjza_          19 VPGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR   95 (201)
T ss_dssp             CTTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred             CCCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccccc
Confidence            47899999999988   3777999999999999999887777655442210           022356777787775431


Q ss_pred             HHHHHHHhhcCCCeeEEEEcc
Q 021391           96 RKFASEYNSQGRPLNILINNA  116 (313)
Q Consensus        96 ~~~~~~~~~~~g~id~lv~~a  116 (313)
                      ..         ...|.++...
T Consensus        96 ~~---------~~~D~i~~~~  107 (201)
T d1pjza_          96 DI---------GHCAAFYDRA  107 (201)
T ss_dssp             HH---------HSEEEEEEES
T ss_pred             cc---------cceeEEEEEe
Confidence            11         1567776544

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=95.20  E-value=0.038  Score=43.67  Aligned_cols=74  Identities=23%  Similarity=0.171  Sum_probs=54.2

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHH
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      ..-++.||+||=.|+++|+   ++..++..|+ +|+.++.++...+.+.+.      ..++.++.+|+.+.         
T Consensus        43 ~~~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N------~~~~~~~~~D~~~l---------  104 (197)
T d1ne2a_          43 NDGNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRN------CGGVNFMVADVSEI---------  104 (197)
T ss_dssp             HHTSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHH------CTTSEEEECCGGGC---------
T ss_pred             HcCCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHc------cccccEEEEehhhc---------
Confidence            3446899999999999883   3455777886 699999887666544332      23578899998542         


Q ss_pred             HhhcCCCeeEEEEcccC
Q 021391          102 YNSQGRPLNILINNAGI  118 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~  118 (313)
                          .++.|++|.|.-+
T Consensus       105 ----~~~fD~Vi~NPPf  117 (197)
T d1ne2a_         105 ----SGKYDTWIMNPPF  117 (197)
T ss_dssp             ----CCCEEEEEECCCC
T ss_pred             ----CCcceEEEeCccc
Confidence                3589999999754

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.17  E-value=0.023  Score=43.50  Aligned_cols=43  Identities=23%  Similarity=0.283  Sum_probs=37.9

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchh
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAA   65 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~   65 (313)
                      ..++.+.||+++|.|=+ -||+.+|+.|...|++|++++.++-.
T Consensus        17 ~t~~~l~Gk~v~V~GyG-~iG~g~A~~~rg~G~~V~v~e~dp~~   59 (163)
T d1li4a1          17 ATDVMIAGKVAVVAGYG-DVGKGCAQALRGFGARVIITEIDPIN   59 (163)
T ss_dssp             HHCCCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             HhCceecCCEEEEeccc-cccHHHHHHHHhCCCeeEeeecccch
Confidence            35677999999999865 79999999999999999999998743

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.05  E-value=0.011  Score=44.87  Aligned_cols=36  Identities=19%  Similarity=0.138  Sum_probs=32.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhH
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAG   66 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~   66 (313)
                      ++|+|.|+ |.+|..++..|++.|++|.+++|+.+..
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~   36 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPY   36 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHh
Confidence            46889998 9999999999999999999999987543

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=94.58  E-value=0.14  Score=41.95  Aligned_cols=75  Identities=13%  Similarity=0.097  Sum_probs=54.7

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      ...|++||=.|+++|+   ++..+++.|++|+.++.++...+.+.+.....  +....++..|+.+      .     ..
T Consensus       118 ~~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n--~~~~~~~~~d~~~------~-----~~  181 (254)
T d2nxca1         118 LRPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRN--GVRPRFLEGSLEA------A-----LP  181 (254)
T ss_dssp             CCTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHT--TCCCEEEESCHHH------H-----GG
T ss_pred             cCccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHc--CCceeEEeccccc------c-----cc
Confidence            4578999999999996   34467788999999999999888877766554  3456677766421      1     12


Q ss_pred             CCCeeEEEEcc
Q 021391          106 GRPLNILINNA  116 (313)
Q Consensus       106 ~g~id~lv~~a  116 (313)
                      .++.|+++.|.
T Consensus       182 ~~~fD~V~ani  192 (254)
T d2nxca1         182 FGPFDLLVANL  192 (254)
T ss_dssp             GCCEEEEEEEC
T ss_pred             ccccchhhhcc
Confidence            35799999773

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.55  E-value=0.092  Score=38.69  Aligned_cols=76  Identities=12%  Similarity=0.113  Sum_probs=52.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc-CCEEEEE-ecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           31 TAIVTGASSGIGTETARVLALR-GVHVIMA-VRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~-G~~V~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      ++.|.|++|-+|+++++...+. ++.++.. ++.. ....    +...  +.   -+..|+|.++.+...++.+.+.  +
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~-~~~~----~~~~--~~---DvvIDFS~p~~~~~~~~~~~~~--~   68 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGD-PLSL----LTDG--NT---EVVIDFTHPDVVMGNLEFLIDN--G   68 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTC-CTHH----HHTT--TC---SEEEECCCTTTHHHHHHHHHHT--T
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC-chhh----hccc--cC---CEEEEcccHHHHHHHHHHHHhc--C
Confidence            5889999999999999987765 5565543 4332 2221    1111  11   2678999999999999988765  5


Q ss_pred             eeEEEEcccC
Q 021391          109 LNILINNAGI  118 (313)
Q Consensus       109 id~lv~~ag~  118 (313)
                      +-+|+-..|.
T Consensus        69 ~~~ViGTTG~   78 (135)
T d1yl7a1          69 IHAVVGTTGF   78 (135)
T ss_dssp             CEEEECCCCC
T ss_pred             CCEEEecccc
Confidence            6678877775

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=94.45  E-value=0.1  Score=40.02  Aligned_cols=36  Identities=19%  Similarity=0.251  Sum_probs=32.3

Q ss_pred             CCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHH
Q 021391           37 ASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREA   72 (313)
Q Consensus        37 as~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~   72 (313)
                      |.|-+|.++|++|++.|++|.+.+|+.++.+++.++
T Consensus         8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~   43 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA   43 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc
Confidence            678899999999999999999999999888877654

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=94.43  E-value=0.2  Score=42.23  Aligned_cols=80  Identities=18%  Similarity=0.112  Sum_probs=54.8

Q ss_pred             CCCEEEEeCCCCc-hHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCC-CCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           28 TGLTAIVTGASSG-IGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIP-SAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        28 ~gk~~lItGas~g-iG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      +|++||=..+..| ++.    .++..|++|+.++.+...++.+.+.+...+- ..++.++..|+.+      ++++..+.
T Consensus       132 ~~~rVLdlf~~tG~~sl----~aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~~------~l~~~~~~  201 (309)
T d2igta1         132 RPLKVLNLFGYTGVASL----VAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMK------FIQREERR  201 (309)
T ss_dssp             SCCEEEEETCTTCHHHH----HHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHH------HHHHHHHH
T ss_pred             CCCeEEEecCCCcHHHH----HHHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHHH------hHHHHhhc
Confidence            6788985555544 333    4567899999999998888877776655432 3367888877643      34444444


Q ss_pred             CCCeeEEEEccc
Q 021391          106 GRPLNILINNAG  117 (313)
Q Consensus       106 ~g~id~lv~~ag  117 (313)
                      ..+.|+||.++-
T Consensus       202 ~~~fD~IilDPP  213 (309)
T d2igta1         202 GSTYDIILTDPP  213 (309)
T ss_dssp             TCCBSEEEECCC
T ss_pred             CCCCCEEEECCC
Confidence            568999999874

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.36  E-value=0.062  Score=40.79  Aligned_cols=86  Identities=10%  Similarity=-0.011  Sum_probs=52.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCC-----CCceEEEEccCCCHHHHHHHHHHH---
Q 021391           31 TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIP-----SAKVDAMELDVSSLASVRKFASEY---  102 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~~D~s~~~~v~~~~~~~---  102 (313)
                      +|-|. |.|-+|.++|+.|++.|++|.+.+|+.++.+...+.-.....     ......+..-+.+.+.++.++...   
T Consensus         3 kIg~I-GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~~   81 (162)
T d3cuma2           3 QIAFI-GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL   81 (162)
T ss_dssp             EEEEE-CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTCH
T ss_pred             EEEEE-EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhccccc
Confidence            45555 568999999999999999999999998776654432110000     012345556667777776665432   


Q ss_pred             hhcCCCeeEEEEccc
Q 021391          103 NSQGRPLNILINNAG  117 (313)
Q Consensus       103 ~~~~g~id~lv~~ag  117 (313)
                      .....+=+++|.+..
T Consensus        82 ~~~l~~g~iiid~st   96 (162)
T d3cuma2          82 LAHIAPGTLVLECST   96 (162)
T ss_dssp             HHHSCTTCEEEECSC
T ss_pred             cccCCCCCEEEECCC
Confidence            222222245665554

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=94.33  E-value=0.17  Score=42.84  Aligned_cols=119  Identities=17%  Similarity=0.150  Sum_probs=71.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      .+|++||=.++..| |.++  +++..|.+|+.++.+...++.+.+.+...+ -.++.++..|..+.      .+......
T Consensus       144 ~~g~rVLDl~~gtG-~~s~--~~a~g~~~V~~vD~s~~al~~a~~n~~~ng-l~~~~~i~~d~~~~------~~~~~~~~  213 (318)
T d1wxxa2         144 FRGERALDVFSYAG-GFAL--HLALGFREVVAVDSSAEALRRAEENARLNG-LGNVRVLEANAFDL------LRRLEKEG  213 (318)
T ss_dssp             CCEEEEEEETCTTT-HHHH--HHHHHEEEEEEEESCHHHHHHHHHHHHHTT-CTTEEEEESCHHHH------HHHHHHTT
T ss_pred             hCCCeeeccCCCCc-HHHH--HHHhcCCcEEeecchHHHHHHHHHHHHHcC-CCCcceeeccHHHH------hhhhHhhh
Confidence            58999996666554 3333  345556799999999988888777766543 23678888886553      23333444


Q ss_pred             CCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECC
Q 021391          107 RPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSS  170 (313)
Q Consensus       107 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS  170 (313)
                      ...|+||.++.....    +..+..    ........+++.+...+++       +|.+++.|.
T Consensus       214 ~~fD~Vi~DpP~~~~----~~~~~~----~~~~~~~~l~~~a~~lLkp-------GG~Lv~~sc  262 (318)
T d1wxxa2         214 ERFDLVVLDPPAFAK----GKKDVE----RAYRAYKEVNLRAIKLLKE-------GGILATASC  262 (318)
T ss_dssp             CCEEEEEECCCCSCC----STTSHH----HHHHHHHHHHHHHHHTEEE-------EEEEEEEEC
T ss_pred             cCCCEEEEcCCcccc----chHHHH----HHHHHHHHHHHHHHHHcCC-------CCEEEEEeC
Confidence            589999999743322    111111    1122333455555555544       677666543

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=94.32  E-value=0.17  Score=38.23  Aligned_cols=87  Identities=13%  Similarity=0.103  Sum_probs=53.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCchhHHHHHHHHHHh--CC------CCceEEEEccCCCHHHHHHHH
Q 021391           30 LTAIVTGASSGIGTETARVLALRGV--HVIMAVRNMAAGKDVREAIVKE--IP------SAKVDAMELDVSSLASVRKFA   99 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~--~V~l~~r~~~~~~~~~~~l~~~--~~------~~~~~~~~~D~s~~~~v~~~~   99 (313)
                      |+++|.|. |-||.++|+.|.+.|+  +|+..+++.+..+.+.+.-...  ..      .....++.+ .+-++++..++
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIil-a~p~~~~~~vl   79 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVML-SSPVRTFREIA   79 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEE-CSCHHHHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccc-cCCchhhhhhh
Confidence            46888875 8999999999999996  7888899987766554431100  00      001112222 22355677777


Q ss_pred             HHHhhcCCCeeEEEEcccC
Q 021391          100 SEYNSQGRPLNILINNAGI  118 (313)
Q Consensus       100 ~~~~~~~g~id~lv~~ag~  118 (313)
                      +++......=.+++...+.
T Consensus        80 ~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          80 KKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHSCTTCEEEECCSC
T ss_pred             hhhhccccccccccccccc
Confidence            7776655444555565543

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.11  E-value=0.33  Score=36.08  Aligned_cols=79  Identities=13%  Similarity=0.147  Sum_probs=56.1

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      .++|+++|=.|+++|   ++..+.+.+|+ +|+.++.+.+..+.+.+.+.......++.+++.|..+      +++   .
T Consensus        12 ~~~g~~vlDl~~GtG---~~~iea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l~---~   79 (152)
T d2esra1          12 YFNGGRVLDLFAGSG---GLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AID---C   79 (152)
T ss_dssp             CCCSCEEEEETCTTC---HHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HHH---H
T ss_pred             hCCCCeEEEcCCccC---HHHHHHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------ccc---c
Confidence            578999996666655   23335677887 7999999998888777776654445578888888433      222   2


Q ss_pred             cCCCeeEEEEcc
Q 021391          105 QGRPLNILINNA  116 (313)
Q Consensus       105 ~~g~id~lv~~a  116 (313)
                      ..+..|+++..+
T Consensus        80 ~~~~fDiIf~DP   91 (152)
T d2esra1          80 LTGRFDLVFLDP   91 (152)
T ss_dssp             BCSCEEEEEECC
T ss_pred             cccccceeEech
Confidence            345799999876

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=94.01  E-value=0.077  Score=41.63  Aligned_cols=84  Identities=10%  Similarity=0.056  Sum_probs=61.5

Q ss_pred             CCCEEE-EeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           28 TGLTAI-VTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        28 ~gk~~l-ItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      .|.+++ +|.|+||...++.+.+ . +.+|+.++++++..+...+.+..-  +.++.++..++++...+   .+..  ..
T Consensus        23 ~~~~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~--~~r~~~~~~~f~~~~~~---~~~~--~~   93 (192)
T d1m6ya2          23 DEKIILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEF--SDRVSLFKVSYREADFL---LKTL--GI   93 (192)
T ss_dssp             TTCEEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGG--TTTEEEEECCGGGHHHH---HHHT--TC
T ss_pred             CCCEEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccc--cccccchhHHHhhHHHH---HHHc--CC
Confidence            444544 7888899888888877 3 469999999998887766655442  56799999999885443   3322  13


Q ss_pred             CCeeEEEEcccCCC
Q 021391          107 RPLNILINNAGIMA  120 (313)
Q Consensus       107 g~id~lv~~ag~~~  120 (313)
                      +.+|.++...|+++
T Consensus        94 ~~vdgIl~DlGvSs  107 (192)
T d1m6ya2          94 EKVDGILMDLGVST  107 (192)
T ss_dssp             SCEEEEEEECSCCH
T ss_pred             CCcceeeeccchhH
Confidence            58999999999854

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=93.94  E-value=0.12  Score=42.47  Aligned_cols=37  Identities=19%  Similarity=0.179  Sum_probs=32.8

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEe
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAV   60 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~   60 (313)
                      ...+++||+++|.| .|-+|+.+++.|.+.|++|+.++
T Consensus        30 ~~~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          30 ENDTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             TTCCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            34679999999999 68999999999999999988764

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=93.90  E-value=0.11  Score=43.33  Aligned_cols=37  Identities=19%  Similarity=0.115  Sum_probs=33.0

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEe
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAV   60 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~   60 (313)
                      ...+++||+++|-|- |-+|+.+|+.|.+.|++|+.++
T Consensus        30 l~~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          30 MTPGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             CCSSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            345799999999987 6999999999999999988775

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=93.87  E-value=0.36  Score=40.72  Aligned_cols=119  Identities=13%  Similarity=0.068  Sum_probs=71.5

Q ss_pred             CCCCCEEEEeCCC-CchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCC-CCceEEEEccCCCHHHHHHHHHHH
Q 021391           26 DGTGLTAIVTGAS-SGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIP-SAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        26 ~~~gk~~lItGas-~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      --+|++||=..+. ||++.    ..+..|+ .|+.++.+...++.+.+.+....- ..++.++..|+-      ..++..
T Consensus       142 ~~~g~~VLdlf~~~G~~sl----~aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~------~~l~~~  211 (317)
T d2b78a2         142 SAAGKTVLNLFSYTAAFSV----AAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF------DYFKYA  211 (317)
T ss_dssp             TTBTCEEEEETCTTTHHHH----HHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH------HHHHHH
T ss_pred             hhCCCceeecCCCCcHHHH----HHHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH------HHHHHH
Confidence            3478999955555 44443    3456787 699999999888887777765432 346888888864      334444


Q ss_pred             hhcCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEEC
Q 021391          103 NSQGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVS  169 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~is  169 (313)
                      .++..+.|++|..+-....    +.++....    ......+++.+++.+++       +|.+++.|
T Consensus       212 ~~~~~~fD~Ii~DPP~f~~----~~~~~~~~----~~~~~~L~~~a~~ll~p-------gG~l~~~s  263 (317)
T d2b78a2         212 RRHHLTYDIIIIDPPSFAR----NKKEVFSV----SKDYHKLIRQGLEILSE-------NGLIIAST  263 (317)
T ss_dssp             HHTTCCEEEEEECCCCC---------CCCCH----HHHHHHHHHHHHHTEEE-------EEEEEEEE
T ss_pred             HhhcCCCCEEEEcChhhcc----chhHHHHH----HHHHHHHHHHHHHHcCC-------CCEEEEEe
Confidence            5555689999999743322    22222221    12334466666666654       56555544

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=93.71  E-value=0.89  Score=35.25  Aligned_cols=143  Identities=9%  Similarity=-0.086  Sum_probs=81.6

Q ss_pred             CCCCEEEEeCCC--CchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           27 GTGLTAIVTGAS--SGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        27 ~~gk~~lItGas--~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      ..|.+++|....  .....+++..|.+.|..++.+.-+.+                         .+.   ..+... ..
T Consensus        23 ~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~-------------------------~~~---~~l~~~-~~   73 (209)
T d2fr1a2          23 LDGTWLVAKYAGTADETSTAAREALESAGARVRELVVDAR-------------------------CGR---DELAER-LR   73 (209)
T ss_dssp             CCSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTT-------------------------CCH---HHHHHH-HT
T ss_pred             CCCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCc-------------------------cCH---HHHHHH-hh
Confidence            456666666443  34777888888888888776643321                         122   222222 23


Q ss_pred             cCCCeeEEEEcccCCCCCCccCccchhhhhhhhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCccccccccCCCCCC
Q 021391          105 QGRPLNILINNAGIMASPFMLSKDNIELQFATNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSEAHRFAYSEGIRFD  184 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  184 (313)
                      ..+.++.||+..+........     .......+...+.++|++...        ....++.+++..+.... +      
T Consensus        74 ~~~~~~~vv~l~~~~~~~~~~-----~~~~~~~~~~~l~l~qal~~~--------~~~~~l~~vT~~a~~~~-~------  133 (209)
T d2fr1a2          74 SVGEVAGVLSLLAVDEAEPEE-----APLALASLADTLSLVQAMVSA--------ELGCPLWTVTESAVATG-P------  133 (209)
T ss_dssp             TSCCCSEEEECTTTTCCCCSS-----CGGGCHHHHHHHHHHHHHHHT--------TCCCCEEEEEESCSCSS-T------
T ss_pred             ccCCCCeEEEeCCCCCCCCcc-----hhHHHHHHHHHHHHHHHHHhC--------CCCCcEEEEEcCCcccC-C------
Confidence            446788999987654332211     111223355666666665321        23467777765432211 1      


Q ss_pred             CCCCCCCCCccccchHhHHHHHHHHHHHHHHhccCCCcEEEEEee
Q 021391          185 KINDESAYNSFGAYGQSKLANILHAKELAKHLKEDGVNITANSLH  229 (313)
Q Consensus       185 ~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~g~~I~vn~i~  229 (313)
                               ....-....+++.+|+|.++.|+..-.  +++..+.
T Consensus       134 ---------~d~~~~p~~A~l~Gl~r~~~~E~P~l~--~~~vDl~  167 (209)
T d2fr1a2         134 ---------FERVRNAAHGALWGVGRVIALENPAVW--GGLVDVP  167 (209)
T ss_dssp             ---------TSCCSCGGGHHHHHHHHHHHHHCGGGE--EEEEEEC
T ss_pred             ---------CcccCCHhHHhHHHHHHHHHHhCCCce--EEEEECC
Confidence                     122335678889999999999998754  5555553

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.70  E-value=0.33  Score=37.92  Aligned_cols=38  Identities=18%  Similarity=0.087  Sum_probs=31.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHH
Q 021391           31 TAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDV   69 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~   69 (313)
                      ++.|. |.|.+|..+|..|++.|++|++.+.|.+..+.+
T Consensus         2 kI~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~l   39 (202)
T d1mv8a2           2 RISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLI   39 (202)
T ss_dssp             EEEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             EEEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHh
Confidence            35555 678999999999999999999999997665543

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=93.63  E-value=0.058  Score=40.47  Aligned_cols=41  Identities=15%  Similarity=0.248  Sum_probs=33.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC-CEEEEEecCchhHHHHHHH
Q 021391           31 TAIVTGASSGIGTETARVLALRG-VHVIMAVRNMAAGKDVREA   72 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G-~~V~l~~r~~~~~~~~~~~   72 (313)
                      ++.+.|+ |-+|.++++.|++.| ++|++.+|+.++.+.+.++
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~   43 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE   43 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh
Confidence            4566666 999999999999988 7999999998877665543

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=93.63  E-value=0.038  Score=40.27  Aligned_cols=70  Identities=20%  Similarity=0.195  Sum_probs=48.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCe
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPL  109 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~i  109 (313)
                      |-++|.|. +.+|+.+++.|.  |..|++++.+++..+....        ..+.++..|.++++..+++      .....
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~~--------~~~~~i~Gd~~~~~~L~~a------~i~~A   63 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVLR--------SGANFVHGDPTRVSDLEKA------NVRGA   63 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHHH--------TTCEEEESCTTSHHHHHHT------TCTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHHh--------cCccccccccCCHHHHHHh------hhhcC
Confidence            34677775 788999999994  5567888888877654431        2577889999998765443      12356


Q ss_pred             eEEEEcc
Q 021391          110 NILINNA  116 (313)
Q Consensus       110 d~lv~~a  116 (313)
                      +.+|.+.
T Consensus        64 ~~vi~~~   70 (129)
T d2fy8a1          64 RAVIVNL   70 (129)
T ss_dssp             SEEEECC
T ss_pred             cEEEEec
Confidence            7777654

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.61  E-value=0.15  Score=42.78  Aligned_cols=77  Identities=10%  Similarity=0.071  Sum_probs=55.8

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      .++||+||-.|++.|+   ++..+|+.|+ +|+.++.++. ...+.+...+.....++.++..|+.+...          
T Consensus        33 ~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~-~~~a~~~~~~~~~~~~i~~~~~~~~~l~~----------   98 (311)
T d2fyta1          33 IFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEI-LYQAMDIIRLNKLEDTITLIKGKIEEVHL----------   98 (311)
T ss_dssp             GTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTH-HHHHHHHHHHTTCTTTEEEEESCTTTSCC----------
T ss_pred             cCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHH-HHHHHHHHHHhCCCccceEEEeeHHHhcC----------
Confidence            3689999999999886   6677888897 7999988764 34444444444445678999999887531          


Q ss_pred             cCCCeeEEEEcc
Q 021391          105 QGRPLNILINNA  116 (313)
Q Consensus       105 ~~g~id~lv~~a  116 (313)
                      ...+.|++|...
T Consensus        99 ~~~~~D~Ivse~  110 (311)
T d2fyta1          99 PVEKVDVIISEW  110 (311)
T ss_dssp             SCSCEEEEEECC
T ss_pred             ccccceEEEEee
Confidence            124799999754

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=93.49  E-value=0.079  Score=42.82  Aligned_cols=48  Identities=19%  Similarity=0.208  Sum_probs=40.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHH
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREA   72 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~   72 (313)
                      .-+++||+++|-|- |.+|..+|+.|.+.|++|+.++.+....+....+
T Consensus        34 ~~~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~   81 (230)
T d1leha1          34 SDSLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE   81 (230)
T ss_dssp             SCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHh
Confidence            56799999999985 6789999999999999999999887776655443

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=93.36  E-value=0.095  Score=41.05  Aligned_cols=42  Identities=17%  Similarity=0.019  Sum_probs=35.9

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchh
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAA   65 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~   65 (313)
                      ...++.||++.|.|. |.||+.+++.+...|.+|+..++....
T Consensus        41 ~~~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~   82 (191)
T d1gdha1          41 VGEKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRAS   82 (191)
T ss_dssp             CBCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCC
T ss_pred             ccceecccceEEeec-ccchHHHHHHHHhhccccccccccccc
Confidence            456789999999975 689999999999999999999876543

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=93.19  E-value=0.4  Score=39.47  Aligned_cols=81  Identities=15%  Similarity=0.099  Sum_probs=56.1

Q ss_pred             CCEEEEeCCCCch-HHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           29 GLTAIVTGASSGI-GTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        29 gk~~lItGas~gi-G~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .++++-.|+++|+ +.+++ +  ...++|+.++.+++.++-+.+......-..++.+...|+.+.         ....++
T Consensus       111 ~~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~~  178 (271)
T d1nv8a_         111 IKTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKFA  178 (271)
T ss_dssp             CCEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGTT
T ss_pred             ccEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------cccccC
Confidence            3566656666664 44433 2  356799999999998888877776543345677888888754         223457


Q ss_pred             CeeEEEEcccCCCC
Q 021391          108 PLNILINNAGIMAS  121 (313)
Q Consensus       108 ~id~lv~~ag~~~~  121 (313)
                      ++|++|.|+-+.+.
T Consensus       179 ~fDlIVsNPPYI~~  192 (271)
T d1nv8a_         179 SIEMILSNPPYVKS  192 (271)
T ss_dssp             TCCEEEECCCCBCG
T ss_pred             cccEEEEcccccCc
Confidence            89999999987643

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=93.17  E-value=0.064  Score=41.12  Aligned_cols=124  Identities=11%  Similarity=0.100  Sum_probs=64.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHc-----CCEEEEEecCchhHHHHHHHHHHhC--CCCceEEEEccCCCHHHHHHHHHH
Q 021391           29 GLTAIVTGASSGIGTETARVLALR-----GVHVIMAVRNMAAGKDVREAIVKEI--PSAKVDAMELDVSSLASVRKFASE  101 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~-----G~~V~l~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~D~s~~~~v~~~~~~  101 (313)
                      ..++.|.||++.....++..|+..     +..|++.+.++++++.....+....  .+........  +|.   ++.+  
T Consensus         3 ~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~---~eal--   75 (167)
T d1u8xx1           3 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TDP---EEAF--   75 (167)
T ss_dssp             CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SCH---HHHH--
T ss_pred             CceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec--CCh---hhcc--
Confidence            345777788664333344444442     2479999999988775444443211  0112222211  122   2222  


Q ss_pred             HhhcCCCeeEEEEcccCCCCCCccCccchhhhhhhh----------------hhHHHHHHHHHHHHHHHhhccCCCCCeE
Q 021391          102 YNSQGRPLNILINNAGIMASPFMLSKDNIELQFATN----------------HLGHFLLTHLLLDTMKKTAQKSSREGRI  165 (313)
Q Consensus       102 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~n----------------~~~~~~l~~~~~~~l~~~~~~~~~~g~i  165 (313)
                           ..-|+||+.+|....+.    ..-+..+..|                ..-..-+++.+.+.+.+.    .+++-+
T Consensus        76 -----~~AD~Vvitag~~~~~g----~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~----~P~A~l  142 (167)
T d1u8xx1          76 -----TDVDFVMAHIRVGKYAM----RALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKY----SPDAWM  142 (167)
T ss_dssp             -----SSCSEEEECCCTTHHHH----HHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHH----CTTCEE
T ss_pred             -----CCCCEEEECCCcCCCCc----eeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhh----CCCeEE
Confidence                 26799999999753321    1111112222                112234556666666665    456777


Q ss_pred             EEECCcc
Q 021391          166 VNVSSEA  172 (313)
Q Consensus       166 v~isS~~  172 (313)
                      +++|-..
T Consensus       143 i~~TNPv  149 (167)
T d1u8xx1         143 LNYSNPA  149 (167)
T ss_dssp             EECCSCH
T ss_pred             EEeCCHH
Confidence            7777644

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=93.13  E-value=0.43  Score=36.55  Aligned_cols=77  Identities=19%  Similarity=0.101  Sum_probs=57.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .|.+||=.|++.|   .++..|++.+.+|+.++.+++.++.+.+.+....-..++.++..|..+          ......
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~----------~~~~~~   99 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE----------ALCKIP   99 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH----------HHTTSC
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhh----------cccccC
Confidence            6889998888887   445567778889999999999888888877765434588999987422          222345


Q ss_pred             CeeEEEEccc
Q 021391          108 PLNILINNAG  117 (313)
Q Consensus       108 ~id~lv~~ag  117 (313)
                      .+|.++.+.+
T Consensus       100 ~~D~v~~~~~  109 (186)
T d1l3ia_         100 DIDIAVVGGS  109 (186)
T ss_dssp             CEEEEEESCC
T ss_pred             CcCEEEEeCc
Confidence            7999987653

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=93.05  E-value=0.038  Score=43.38  Aligned_cols=40  Identities=28%  Similarity=0.214  Sum_probs=33.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHH
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVR   70 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~   70 (313)
                      +++.|.||+. .|.++|..|++.|.+|.+++|+++..+...
T Consensus         8 ~KI~ViGaG~-wGtAlA~~La~~g~~V~l~~r~~~~~~~i~   47 (189)
T d1n1ea2           8 NKAVVFGSGA-FGTALAMVLSKKCREVCVWHMNEEEVRLVN   47 (189)
T ss_dssp             EEEEEECCSH-HHHHHHHHHHTTEEEEEEECSCHHHHHHHH
T ss_pred             ceEEEECCCH-HHHHHHHHHHHcCCeEEEEEecHHHHHHHh
Confidence            4688888764 899999999999999999999976655433

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=92.85  E-value=0.5  Score=35.91  Aligned_cols=127  Identities=13%  Similarity=0.087  Sum_probs=67.0

Q ss_pred             CCEEEEeCCCCchH--HHHHHHHHHc----CCEEEEEecCchhHHHHHHHHHH---hCCCCceEEEEccCCCHHHHHHHH
Q 021391           29 GLTAIVTGASSGIG--TETARVLALR----GVHVIMAVRNMAAGKDVREAIVK---EIPSAKVDAMELDVSSLASVRKFA   99 (313)
Q Consensus        29 gk~~lItGas~giG--~aia~~La~~----G~~V~l~~r~~~~~~~~~~~l~~---~~~~~~~~~~~~D~s~~~~v~~~~   99 (313)
                      +.++.|.|| |.+|  .++...|+..    +..+++.+.++++++.....+..   .. +....+..  -+|.   ++++
T Consensus         2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~-~~~~~i~~--~td~---~eaL   74 (171)
T d1obba1           2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEV-GADLKFEK--TMNL---DDVI   74 (171)
T ss_dssp             CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHT-TCCCEEEE--ESCH---HHHH
T ss_pred             CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhc-CCCeEEEE--eCCh---hhcc
Confidence            356788887 4444  4555556643    45899999999887754444433   22 11222211  1232   2223


Q ss_pred             HHHhhcCCCeeEEEEcccCCCCCC-------------ccCccchh-hhhh----hhhhHHHHHHHHHHHHHHHhhccCCC
Q 021391          100 SEYNSQGRPLNILINNAGIMASPF-------------MLSKDNIE-LQFA----TNHLGHFLLTHLLLDTMKKTAQKSSR  161 (313)
Q Consensus       100 ~~~~~~~g~id~lv~~ag~~~~~~-------------~~~~~~~~-~~~~----~n~~~~~~l~~~~~~~l~~~~~~~~~  161 (313)
                      +       ..|++|++++......             .....+-+ .+..    ....-..-+++.+.+.+.+.    .+
T Consensus        75 ~-------dad~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~----~p  143 (171)
T d1obba1          75 I-------DADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKL----SP  143 (171)
T ss_dssp             T-------TCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHH----CT
T ss_pred             c-------CCCeEeeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHH----Cc
Confidence            3       6899999987642210             00000000 0000    01123555777777777775    45


Q ss_pred             CCeEEEECCccc
Q 021391          162 EGRIVNVSSEAH  173 (313)
Q Consensus       162 ~g~iv~isS~~~  173 (313)
                      ++-++++|-...
T Consensus       144 ~a~~i~~TNPvd  155 (171)
T d1obba1         144 KAWYLQAANPIF  155 (171)
T ss_dssp             TCEEEECSSCHH
T ss_pred             CeEEEEECChHH
Confidence            778888876553

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=92.77  E-value=0.28  Score=38.95  Aligned_cols=80  Identities=16%  Similarity=0.151  Sum_probs=60.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      -+|.+||..|+++|--.++..+|+  |.+|+.+.++++-.+...+.+... .-.++.++..|..+-          ....
T Consensus        77 ~~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~-g~~nv~~~~gd~~~g----------~~~~  143 (215)
T d1jg1a_          77 KPGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERA-GVKNVHVILGDGSKG----------FPPK  143 (215)
T ss_dssp             CTTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHT-TCCSEEEEESCGGGC----------CGGG
T ss_pred             CccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHc-CCceeEEEECccccC----------Cccc
Confidence            367899999999998888888877  467999999977666666665553 346799999997652          1223


Q ss_pred             CCeeEEEEcccCC
Q 021391          107 RPLNILINNAGIM  119 (313)
Q Consensus       107 g~id~lv~~ag~~  119 (313)
                      ++.|.++.++++.
T Consensus       144 ~pfD~Iiv~~a~~  156 (215)
T d1jg1a_         144 APYDVIIVTAGAP  156 (215)
T ss_dssp             CCEEEEEECSBBS
T ss_pred             CcceeEEeecccc
Confidence            5899999988764

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=92.73  E-value=0.058  Score=42.58  Aligned_cols=40  Identities=20%  Similarity=0.121  Sum_probs=34.9

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCch
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMA   64 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~   64 (313)
                      ..++.||++.|.|- |.||+.+|+.|...|++|+..++...
T Consensus        38 g~el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          38 GREVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             BCCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             CccccCCeEEEecc-cccchhHHHhHhhhcccccccCcccc
Confidence            45689999999985 78999999999999999999987644

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=92.67  E-value=0.13  Score=40.10  Aligned_cols=41  Identities=22%  Similarity=0.182  Sum_probs=35.9

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCch
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMA   64 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~   64 (313)
                      ...++.|+++.|.| .|.||+++++.|...|.+|+..++...
T Consensus        38 ~~~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   78 (188)
T d2naca1          38 HAYDLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRL   78 (188)
T ss_dssp             TCCCCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCC
T ss_pred             cceeccccceeecc-ccccchhhhhhhhccCceEEEEeeccc
Confidence            45678999999998 578999999999999999999998643

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=92.64  E-value=0.72  Score=33.72  Aligned_cols=87  Identities=10%  Similarity=0.076  Sum_probs=56.1

Q ss_pred             CCCEEEEeCCC---CchHHHHHHHHHHcCCEEEEEecCchhHH--HHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           28 TGLTAIVTGAS---SGIGTETARVLALRGVHVIMAVRNMAAGK--DVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        28 ~gk~~lItGas---~giG~aia~~La~~G~~V~l~~r~~~~~~--~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      +-|++.|.|||   +..|..+.+.|.+.|++|+.+..+.+...  .+...+.+. + ..+..+.+ +..++.+..+++++
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dl-p-~~iD~v~i-~vp~~~~~~~~~e~   94 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDI-P-DKIEVVDL-FVKPKLTMEYVEQA   94 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGC-S-SCCSEEEE-CSCHHHHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCccccccccc-C-ccceEEEE-EeCHHHHHHHHHHH
Confidence            56999999999   57999999999999999999876543221  111112111 1 11222111 34567788888887


Q ss_pred             hhcCCCeeEEEEcccCC
Q 021391          103 NSQGRPLNILINNAGIM  119 (313)
Q Consensus       103 ~~~~g~id~lv~~ag~~  119 (313)
                      .+.  ++..++...|..
T Consensus        95 ~~~--g~k~v~~~~G~~  109 (139)
T d2d59a1          95 IKK--GAKVVWFQYNTY  109 (139)
T ss_dssp             HHH--TCSEEEECTTCC
T ss_pred             HHh--CCCEEEEecccc
Confidence            766  456777777754

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.51  E-value=0.39  Score=37.90  Aligned_cols=81  Identities=10%  Similarity=0.048  Sum_probs=58.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      .|.+||-.|+++|--.++..++...+.+|+.++.+++..+.+.+.+.... -.++.++..|..+.-          ...+
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~-~~n~~~~~~d~~~~~----------~~~~  143 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLG-IENVIFVCGDGYYGV----------PEFS  143 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTT-CCSEEEEESCGGGCC----------GGGC
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhc-ccccccccCchHHcc----------cccc
Confidence            67899999999987777666666667799999999888887777665532 346777777765421          1234


Q ss_pred             CeeEEEEcccCC
Q 021391          108 PLNILINNAGIM  119 (313)
Q Consensus       108 ~id~lv~~ag~~  119 (313)
                      ..|.++.+++..
T Consensus       144 ~fD~I~~~~~~~  155 (213)
T d1dl5a1         144 PYDVIFVTVGVD  155 (213)
T ss_dssp             CEEEEEECSBBS
T ss_pred             chhhhhhhccHH
Confidence            799999888653

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.49  E-value=0.16  Score=42.50  Aligned_cols=25  Identities=24%  Similarity=0.317  Sum_probs=21.7

Q ss_pred             CCchHHHHHHHHHHcCCEEEEEecC
Q 021391           38 SSGIGTETARVLALRGVHVIMAVRN   62 (313)
Q Consensus        38 s~giG~aia~~La~~G~~V~l~~r~   62 (313)
                      ||..|.++|+.|..+|+.|+++.+.
T Consensus        45 SGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          45 SGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             chHHHHHHHHHHHHcCCEEEEEecC
Confidence            3579999999999999999998643

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.47  E-value=0.071  Score=41.25  Aligned_cols=43  Identities=16%  Similarity=0.247  Sum_probs=32.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHH
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVK   75 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~   75 (313)
                      ++|.|.|| |..|.++|..|++.|.+|.+++|..+.  +..+.+..
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~--~~~~~i~~   43 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDT--EILKSISA   43 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGH--HHHHHHHT
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccH--HHHHHHhh
Confidence            35677776 789999999999999999999986442  33445544

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.39  E-value=0.057  Score=43.82  Aligned_cols=36  Identities=28%  Similarity=0.380  Sum_probs=31.1

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHH-cCCEEEEEe
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLAL-RGVHVIMAV   60 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~-~G~~V~l~~   60 (313)
                      ..+++|++++|-| .|-+|+.+|+.|++ .|++|+.++
T Consensus        26 ~~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          26 GIDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             TCCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CCCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            4578999999997 88999999999986 599988765

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=92.36  E-value=0.18  Score=39.23  Aligned_cols=40  Identities=15%  Similarity=0.101  Sum_probs=34.5

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM   63 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~   63 (313)
                      ...++.++++.|. |.|.||+.+|+.+...|.+|+..++..
T Consensus        38 ~~~~l~~~~vgii-G~G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d1sc6a1          38 GSFEARGKKLGII-GYGHIGTQLGILAESLGMYVYFYDIEN   77 (188)
T ss_dssp             -CCCSTTCEEEEE-CCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             ccccccceEEEEe-ecccchhhhhhhcccccceEeeccccc
Confidence            3457899999999 468999999999999999999999764

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.34  E-value=0.44  Score=37.13  Aligned_cols=76  Identities=14%  Similarity=0.084  Sum_probs=56.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      ++.+||=.|++.|.   ++..|++.|++|+.++.+.+-.+.+.+.....  +....++..|..+..          ...+
T Consensus        37 ~~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~--~~~~~~~~~d~~~l~----------~~~~  101 (226)
T d1ve3a1          37 KRGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSR--ESNVEFIVGDARKLS----------FEDK  101 (226)
T ss_dssp             SCCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCCEEEECCTTSCC----------SCTT
T ss_pred             CCCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhccc--ccccccccccccccc----------ccCc
Confidence            45689999999986   66789999999999999987777666555554  446777888877642          1224


Q ss_pred             CeeEEEEcccC
Q 021391          108 PLNILINNAGI  118 (313)
Q Consensus       108 ~id~lv~~ag~  118 (313)
                      ..|+++....+
T Consensus       102 ~fD~I~~~~~l  112 (226)
T d1ve3a1         102 TFDYVIFIDSI  112 (226)
T ss_dssp             CEEEEEEESCG
T ss_pred             CceEEEEecch
Confidence            78998877543

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=92.20  E-value=0.087  Score=39.50  Aligned_cols=41  Identities=10%  Similarity=0.174  Sum_probs=33.5

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHH
Q 021391           32 AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAI   73 (313)
Q Consensus        32 ~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l   73 (313)
                      +.|. |+|-+|.++++.|.+.|++|++.+|+.++.++..++.
T Consensus         3 Ig~I-G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           3 IGII-GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             EEEE-CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             EEEE-eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            4444 6789999999999999999999999988777665543

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=92.11  E-value=0.12  Score=40.48  Aligned_cols=42  Identities=17%  Similarity=0.131  Sum_probs=36.3

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCch
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMA   64 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~   64 (313)
                      .....+.||++.|.| .|.||+.+|+.|...|++|+..++...
T Consensus        42 ~~~~eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   83 (193)
T d1mx3a1          42 SGAARIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLS   83 (193)
T ss_dssp             TTCCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             cCceeeeCceEEEec-cccccccceeeeeccccceeeccCccc
Confidence            345679999999996 578999999999999999999998654

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=91.97  E-value=0.94  Score=34.23  Aligned_cols=77  Identities=17%  Similarity=0.147  Sum_probs=56.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      .+..+++|.||+ -.|.+.++.....|+.|.+.+.+.+.++++.....     ..++.   -.++.+.+.+.+.      
T Consensus        30 v~pa~V~ViGaG-vaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~-----~~~~~---~~~~~~~l~~~~~------   94 (168)
T d1pjca1          30 VKPGKVVILGGG-VVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG-----SRVEL---LYSNSAEIETAVA------   94 (168)
T ss_dssp             BCCCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-----GGSEE---EECCHHHHHHHHH------
T ss_pred             CCCcEEEEECCC-hHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhc-----cccee---ehhhhhhHHHhhc------
Confidence            456889999874 67899999999999999999999888877654432     22332   3456666655555      


Q ss_pred             CCeeEEEEcccCC
Q 021391          107 RPLNILINNAGIM  119 (313)
Q Consensus       107 g~id~lv~~ag~~  119 (313)
                       .-|++|.++=+.
T Consensus        95 -~aDivI~aalip  106 (168)
T d1pjca1          95 -EADLLIGAVLVP  106 (168)
T ss_dssp             -TCSEEEECCCCT
T ss_pred             -cCcEEEEeeecC
Confidence             579999998654

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=91.76  E-value=0.76  Score=35.29  Aligned_cols=78  Identities=22%  Similarity=0.121  Sum_probs=56.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhC-CCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEI-PSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      ..+++||=.|++.|   .++..|++.+.+|++++.++...+.+.+.+.... ...++.++..|+.+.-           .
T Consensus        51 ~~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~~-----------~  116 (194)
T d1dusa_          51 DKDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV-----------K  116 (194)
T ss_dssp             CTTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC-----------T
T ss_pred             CCCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhhh-----------c
Confidence            57899999998888   4456677888899999999877777666555432 2346888999986531           1


Q ss_pred             CCCeeEEEEcccC
Q 021391          106 GRPLNILINNAGI  118 (313)
Q Consensus       106 ~g~id~lv~~ag~  118 (313)
                      .+..|+++.|..+
T Consensus       117 ~~~fD~Ii~~~p~  129 (194)
T d1dusa_         117 DRKYNKIITNPPI  129 (194)
T ss_dssp             TSCEEEEEECCCS
T ss_pred             cCCceEEEEcccE
Confidence            2479999988643

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=91.64  E-value=1.3  Score=33.82  Aligned_cols=83  Identities=18%  Similarity=0.204  Sum_probs=58.6

Q ss_pred             CCCCCCEEEEeCC-CCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           25 IDGTGLTAIVTGA-SSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        25 ~~~~gk~~lItGa-s~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      ..++|+++|=..| ||.+|.    +.+.+|+ +|+.++.+.+..+.+.+.+.......++.++..|+.+      ++++.
T Consensus        38 ~~~~~~~vLDlfaGsG~~g~----ea~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~~~------~l~~~  107 (182)
T d2fhpa1          38 PYFDGGMALDLYSGSGGLAI----EAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANR------ALEQF  107 (182)
T ss_dssp             SCCSSCEEEETTCTTCHHHH----HHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH------HHHHH
T ss_pred             HhcCCCEEEEcccccccccc----eeeecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccchh------hhhhh
Confidence            3578999995554 455665    5667888 6999999988888777777654434578888888643      34554


Q ss_pred             hhcCCCeeEEEEccc
Q 021391          103 NSQGRPLNILINNAG  117 (313)
Q Consensus       103 ~~~~g~id~lv~~ag  117 (313)
                      .....+.|+++..+-
T Consensus       108 ~~~~~~fDlIflDPP  122 (182)
T d2fhpa1         108 YEEKLQFDLVLLDPP  122 (182)
T ss_dssp             HHTTCCEEEEEECCC
T ss_pred             cccCCCcceEEechh
Confidence            445557999998773

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.61  E-value=0.39  Score=40.31  Aligned_cols=76  Identities=14%  Similarity=0.097  Sum_probs=53.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      .+||+||-.|++.|+   ++..+++.|+ +|+.++.++ ....+.+.+....-..++.++..|+.+.+.          .
T Consensus        32 ~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~n~~~~~v~~~~~~~~~~~~----------~   97 (316)
T d1oria_          32 FKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVEL----------P   97 (316)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCC----------S
T ss_pred             CCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcH-HHhhhhhHHHHhCCccccceEeccHHHccc----------c
Confidence            589999999999985   5667888897 699898764 344444444444335679999999877531          2


Q ss_pred             CCCeeEEEEcc
Q 021391          106 GRPLNILINNA  116 (313)
Q Consensus       106 ~g~id~lv~~a  116 (313)
                      ...+|+++...
T Consensus        98 ~~~~D~ivs~~  108 (316)
T d1oria_          98 VEKVDIIISEW  108 (316)
T ss_dssp             SSCEEEEEECC
T ss_pred             cceeEEEeeee
Confidence            24789998754

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=91.43  E-value=0.3  Score=39.04  Aligned_cols=76  Identities=14%  Similarity=0.071  Sum_probs=56.3

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      .-++++||=.|++.|   .++..|+++|++|+.++.++.-++.+.+.+...  +.++.++..|+.+..-           
T Consensus        39 ~~~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~--~~~i~~~~~d~~~l~~-----------  102 (251)
T d1wzna1          39 KREVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKER--NLKIEFLQGDVLEIAF-----------  102 (251)
T ss_dssp             SSCCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCCEEEESCGGGCCC-----------
T ss_pred             CCCCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccc--cccchheehhhhhccc-----------
Confidence            345689999999987   456779999999999999987776666655544  4478899999876431           


Q ss_pred             CCCeeEEEEccc
Q 021391          106 GRPLNILINNAG  117 (313)
Q Consensus       106 ~g~id~lv~~ag  117 (313)
                      .+..|.++..-+
T Consensus       103 ~~~fD~I~~~~~  114 (251)
T d1wzna1         103 KNEFDAVTMFFS  114 (251)
T ss_dssp             CSCEEEEEECSS
T ss_pred             ccccchHhhhhh
Confidence            136898887543

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=91.43  E-value=0.18  Score=38.17  Aligned_cols=43  Identities=14%  Similarity=0.181  Sum_probs=37.5

Q ss_pred             ccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchh
Q 021391           22 TQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAA   65 (313)
Q Consensus        22 ~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~   65 (313)
                      ..+.-++||+++|.|= |-+|+.+|++|...|++|+++..++-.
T Consensus        16 ~t~~~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~   58 (163)
T d1v8ba1          16 ATDFLISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPIC   58 (163)
T ss_dssp             HHCCCCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred             HhCceecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchh
Confidence            3467799999999986 569999999999999999999998743

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.25  E-value=0.13  Score=41.12  Aligned_cols=80  Identities=10%  Similarity=0.081  Sum_probs=55.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHh----------------CCCCceEEEEccCC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKE----------------IPSAKVDAMELDVS   90 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~~D~s   90 (313)
                      -.|.+||..|++.|   ..+..|+++|++|+.++-+++..+.+.+.....                ..+.++.++.+|+.
T Consensus        44 ~~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~  120 (229)
T d2bzga1          44 KSGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIF  120 (229)
T ss_dssp             CCSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGG
T ss_pred             CCCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchh
Confidence            47889999999988   468889999999999999988776655443210                11345777888876


Q ss_pred             CHHHHHHHHHHHhhcCCCeeEEEEcccC
Q 021391           91 SLASVRKFASEYNSQGRPLNILINNAGI  118 (313)
Q Consensus        91 ~~~~v~~~~~~~~~~~g~id~lv~~ag~  118 (313)
                      +...         ...+..|+++....+
T Consensus       121 ~l~~---------~~~~~fd~i~~~~~l  139 (229)
T d2bzga1         121 DLPR---------TNIGKFDMIWDRGAL  139 (229)
T ss_dssp             GGGG---------SCCCCEEEEEESSST
T ss_pred             hccc---------cccCceeEEEEEEEE
Confidence            5431         122467777766544

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=91.17  E-value=0.078  Score=43.20  Aligned_cols=34  Identities=24%  Similarity=0.227  Sum_probs=28.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM   63 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~   63 (313)
                      ||+|+|.||+ --|...|..|++.|++|.++.++.
T Consensus         1 ~KkV~IIGaG-~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGAG-VSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECCS-HHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECcC-HHHHHHHHHHHhCCCCEEEEeCCC
Confidence            6899999876 347889999999999999998753

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.14  E-value=0.55  Score=37.30  Aligned_cols=82  Identities=21%  Similarity=0.109  Sum_probs=61.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCC----CCceEEEEccCCCHHHHHHHHHHHh
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIP----SAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~----~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      .|.+||-.|+++|--.++..++.....+|+.++++++-.+.+.+.+.+...    -.++.+...|..+.          .
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~----------~  145 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG----------Y  145 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC----------C
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeecccc----------c
Confidence            678999999999988888888888888999999999888877777665321    23567777776431          1


Q ss_pred             hcCCCeeEEEEcccCC
Q 021391          104 SQGRPLNILINNAGIM  119 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~  119 (313)
                      ...+..|.++.+++..
T Consensus       146 ~~~~~fD~I~~~~~~~  161 (224)
T d1i1na_         146 AEEAPYDAIHVGAAAP  161 (224)
T ss_dssp             GGGCCEEEEEECSBBS
T ss_pred             chhhhhhhhhhhcchh
Confidence            1234799999988754

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.04  E-value=0.21  Score=37.22  Aligned_cols=38  Identities=16%  Similarity=0.121  Sum_probs=30.5

Q ss_pred             CCCCEEEEe-CCCCchHHHHHHHHHHcCCEEEEEecCch
Q 021391           27 GTGLTAIVT-GASSGIGTETARVLALRGVHVIMAVRNMA   64 (313)
Q Consensus        27 ~~gk~~lIt-Gas~giG~aia~~La~~G~~V~l~~r~~~   64 (313)
                      .-++.++|. .+++.||..+|..|+++|.+|.++.+...
T Consensus        37 ~~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          37 KIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             ccCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            345555554 56789999999999999999999998754

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=90.86  E-value=1.1  Score=31.41  Aligned_cols=82  Identities=11%  Similarity=0.118  Sum_probs=55.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      ||+|||.=-..-+-..+...|.+.|++|+..+.+..   ++.+.+...  ...+.++-.++.+.+ --.+++++++....
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~---~al~~~~~~--~~dliilD~~mp~~~-G~e~~~~ir~~~~~   74 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGR---EAVEKYKEL--KPDIVTMDITMPEMN-GIDAIKEIMKIDPN   74 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHH---HHHHHHHHH--CCSEEEEECSCGGGC-HHHHHHHHHHHCTT
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHH---HHHHHHHhc--cCCEEEEecCCCCCC-HHHHHHHHHHhCCC
Confidence            799999999999999999999999999987666643   333444444  234555555555544 34566777666666


Q ss_pred             eeEEEEcc
Q 021391          109 LNILINNA  116 (313)
Q Consensus       109 id~lv~~a  116 (313)
                      +-+++..+
T Consensus        75 ~pvi~ls~   82 (118)
T d1u0sy_          75 AKIIVCSA   82 (118)
T ss_dssp             CCEEEEEC
T ss_pred             CcEEEEEc
Confidence            66666543

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.70  E-value=0.14  Score=46.69  Aligned_cols=35  Identities=23%  Similarity=0.268  Sum_probs=29.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRN   62 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~   62 (313)
                      |.+.+|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus        23 L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d   58 (529)
T d1yova1          23 LESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGN   58 (529)
T ss_dssp             HHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCS
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCC
Confidence            45678999997 7999999999999998 78887654

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=90.46  E-value=0.54  Score=34.90  Aligned_cols=84  Identities=15%  Similarity=0.074  Sum_probs=56.5

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCC----CCceEEEEccCCCHHHHHHHHHHHhhcCC
Q 021391           32 AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIP----SAKVDAMELDVSSLASVRKFASEYNSQGR  107 (313)
Q Consensus        32 ~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~----~~~~~~~~~D~s~~~~v~~~~~~~~~~~g  107 (313)
                      |-+.|- |-+|..+|+.|++.|+.+ +.+|+.++.++..++......    -.....+...+.+.+.+....+.+.....
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~   80 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR   80 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence            344454 889999999999988755 678888777766655422110    11344555667778888888888877665


Q ss_pred             CeeEEEEccc
Q 021391          108 PLNILINNAG  117 (313)
Q Consensus       108 ~id~lv~~ag  117 (313)
                      +-.++|.+.-
T Consensus        81 ~~~~iid~sT   90 (156)
T d2cvza2          81 EGTYWVDATS   90 (156)
T ss_dssp             TTEEEEECSC
T ss_pred             cccccccccc
Confidence            5666666664

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=90.43  E-value=0.16  Score=41.31  Aligned_cols=35  Identities=29%  Similarity=0.244  Sum_probs=31.9

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEe
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAV   60 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~   60 (313)
                      .+++||+++|-| .|-+|..+|+.|.+.|++|+.++
T Consensus        27 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          27 GGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             SCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            479999999997 78999999999999999988765

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=90.35  E-value=0.25  Score=39.61  Aligned_cols=77  Identities=9%  Similarity=-0.028  Sum_probs=58.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      ....+++||=.|++.|.   ++..|+++|.+|+.++.+++-++.+.+.+...  +.++.++..|+.+..           
T Consensus        34 ~~~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~--~~~v~~~~~d~~~~~-----------   97 (246)
T d1y8ca_          34 NNLVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQ--GLKPRLACQDISNLN-----------   97 (246)
T ss_dssp             TTCCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHT--TCCCEEECCCGGGCC-----------
T ss_pred             hCCCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhcccccccc--Cccceeeccchhhhc-----------
Confidence            45678999999999885   78899999999999999987777665555443  447889988887642           


Q ss_pred             cCCCeeEEEEccc
Q 021391          105 QGRPLNILINNAG  117 (313)
Q Consensus       105 ~~g~id~lv~~ag  117 (313)
                      ..+..|+++...+
T Consensus        98 ~~~~fD~i~~~~~  110 (246)
T d1y8ca_          98 INRKFDLITCCLD  110 (246)
T ss_dssp             CSCCEEEEEECTT
T ss_pred             ccccccccceeee
Confidence            1247999886543

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=90.01  E-value=0.65  Score=32.55  Aligned_cols=35  Identities=23%  Similarity=0.188  Sum_probs=30.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCch
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMA   64 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~   64 (313)
                      .|+++|.|| |-+|..+|..|++.|.+|.++.|...
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            378888876 68999999999999999999988753

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=89.98  E-value=0.24  Score=35.40  Aligned_cols=36  Identities=25%  Similarity=0.293  Sum_probs=31.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCch
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMA   64 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~   64 (313)
                      ++|+++|.|| |.+|..+|..|+++|.+|.++.+...
T Consensus        29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          29 PQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            4688888875 68999999999999999999998753

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=89.81  E-value=0.61  Score=35.29  Aligned_cols=79  Identities=19%  Similarity=0.170  Sum_probs=49.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      .+|+++|=.|+++|.   ++...+.+|++|+.++.++...+.+.+.+....-..++..  .   +.+   .+........
T Consensus        40 ~~g~~vLDl~~G~G~---~~i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~--~---~~d---~~~~~~~~~~  108 (171)
T d1ws6a1          40 PRRGRFLDPFAGSGA---VGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVA--L---PVE---VFLPEAKAQG  108 (171)
T ss_dssp             TTCCEEEEETCSSCH---HHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEEC--S---CHH---HHHHHHHHTT
T ss_pred             cCCCeEEEeccccch---hhhhhhhccchhhhcccCHHHHhhhhHHHHhhccccceee--e---ehh---cccccccccC
Confidence            367888855655552   3446777899999999999888877777665432333222  2   222   2233333444


Q ss_pred             CCeeEEEEcc
Q 021391          107 RPLNILINNA  116 (313)
Q Consensus       107 g~id~lv~~a  116 (313)
                      ...|+++.++
T Consensus       109 ~~fD~If~DP  118 (171)
T d1ws6a1         109 ERFTVAFMAP  118 (171)
T ss_dssp             CCEEEEEECC
T ss_pred             CccceeEEcc
Confidence            5799999886

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=89.70  E-value=1  Score=32.60  Aligned_cols=35  Identities=26%  Similarity=0.188  Sum_probs=30.5

Q ss_pred             CCCEEEEeCCC---CchHHHHHHHHHHcCCEEEEEecC
Q 021391           28 TGLTAIVTGAS---SGIGTETARVLALRGVHVIMAVRN   62 (313)
Q Consensus        28 ~gk~~lItGas---~giG~aia~~La~~G~~V~l~~r~   62 (313)
                      +-|++.|.|||   +..|..+.+.|.+.|++++.+.-+
T Consensus        12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~   49 (136)
T d1iuka_          12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPR   49 (136)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGG
T ss_pred             CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEec
Confidence            56899999999   569999999999999998887544

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=89.56  E-value=0.75  Score=36.57  Aligned_cols=76  Identities=13%  Similarity=0.039  Sum_probs=53.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      -.|.+||-.|+++|--.+   .|++.+.+|+.+.++++..+.+.+.+ ..  ..++.++..|..+-          ....
T Consensus        69 ~~g~~VLdIG~GsGy~ta---~La~l~~~V~aiE~~~~~~~~A~~~~-~~--~~nv~~~~~d~~~g----------~~~~  132 (224)
T d1vbfa_          69 HKGQKVLEIGTGIGYYTA---LIAEIVDKVVSVEINEKMYNYASKLL-SY--YNNIKLILGDGTLG----------YEEE  132 (224)
T ss_dssp             CTTCEEEEECCTTSHHHH---HHHHHSSEEEEEESCHHHHHHHHHHH-TT--CSSEEEEESCGGGC----------CGGG
T ss_pred             cccceEEEecCCCCHHHH---HHHHHhcccccccccHHHHHHHHHHH-hc--ccccccccCchhhc----------chhh
Confidence            377899999999885433   46666789999998887766554433 33  34788888887541          1123


Q ss_pred             CCeeEEEEcccC
Q 021391          107 RPLNILINNAGI  118 (313)
Q Consensus       107 g~id~lv~~ag~  118 (313)
                      ++.|.++.+++.
T Consensus       133 ~pfD~Iiv~~a~  144 (224)
T d1vbfa_         133 KPYDRVVVWATA  144 (224)
T ss_dssp             CCEEEEEESSBB
T ss_pred             hhHHHHHhhcch
Confidence            579999988864

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=89.20  E-value=0.34  Score=34.60  Aligned_cols=36  Identities=25%  Similarity=0.180  Sum_probs=31.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM   63 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~   63 (313)
                      -++|+++|.|| |.+|..+|..|++.|.+|.++.+..
T Consensus        28 ~~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          28 PEVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TTCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             cCCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            46788888865 6999999999999999999998764

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=89.18  E-value=0.11  Score=40.66  Aligned_cols=31  Identities=16%  Similarity=0.154  Sum_probs=27.7

Q ss_pred             CEEEEeCCCCchHHH-----HHHHHHHcCCEEEEEe
Q 021391           30 LTAIVTGASSGIGTE-----TARVLALRGVHVIMAV   60 (313)
Q Consensus        30 k~~lItGas~giG~a-----ia~~La~~G~~V~l~~   60 (313)
                      |+.+|||.+.|+|+.     +|+.|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            789999999999985     6788999999999986

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=89.16  E-value=0.31  Score=37.61  Aligned_cols=75  Identities=15%  Similarity=0.112  Sum_probs=49.7

Q ss_pred             CCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCCeeEEEEcc
Q 021391           37 ASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRPLNILINNA  116 (313)
Q Consensus        37 as~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~id~lv~~a  116 (313)
                      ||-|-|-+ .+.+++++.+|+.++|+++..+.+.+ +   . ..++.++..++++.+..   +...  ..+.+|.++...
T Consensus        25 ~T~G~GGh-s~~iL~~~~~viaiD~D~~ai~~a~~-~---~-~~~~~~~~~~f~~~~~~---l~~~--~~~~vdgIl~DL   93 (182)
T d1wg8a2          25 ATLGGAGH-ARGILERGGRVIGLDQDPEAVARAKG-L---H-LPGLTVVQGNFRHLKRH---LAAL--GVERVDGILADL   93 (182)
T ss_dssp             TTCTTSHH-HHHHHHTTCEEEEEESCHHHHHHHHH-T---C-CTTEEEEESCGGGHHHH---HHHT--TCSCEEEEEEEC
T ss_pred             eCCCCcHH-HHHHhcccCcEEEEhhhhhHHHHHhh-c---c-ccceeEeehHHHHHHHH---HHHc--CCCccCEEEEEc
Confidence            33333334 45556677799999999877655432 1   2 45789999998885443   3332  235799999999


Q ss_pred             cCCCCC
Q 021391          117 GIMASP  122 (313)
Q Consensus       117 g~~~~~  122 (313)
                      |+.+..
T Consensus        94 GvSs~q   99 (182)
T d1wg8a2          94 GVSSFH   99 (182)
T ss_dssp             SCCHHH
T ss_pred             cCCHHH
Confidence            986543

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=89.06  E-value=0.34  Score=35.90  Aligned_cols=36  Identities=17%  Similarity=0.161  Sum_probs=29.4

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHH
Q 021391           32 AIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKD   68 (313)
Q Consensus        32 ~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~   68 (313)
                      +-|. |.|-+|.++++.|+++|+.|++.+++.+....
T Consensus         3 IgiI-G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~   38 (152)
T d1i36a2           3 VGFI-GFGEVAQTLASRLRSRGVEVVTSLEGRSPSTI   38 (152)
T ss_dssp             EEEE-SCSHHHHHHHHHHHHTTCEEEECCTTCCHHHH
T ss_pred             EEEE-cHHHHHHHHHHHHHHCCCeEEEEcCchhHHHH
Confidence            4455 55999999999999999999999887765544

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=89.06  E-value=1.7  Score=32.63  Aligned_cols=128  Identities=10%  Similarity=0.054  Sum_probs=63.2

Q ss_pred             EEEEeCCC-CchHHHHHHHHHHcC----CEEEEEecCchhHH-HHHHHHHHh-CCCCceEEEEccCCCHHHHHHHHHHHh
Q 021391           31 TAIVTGAS-SGIGTETARVLALRG----VHVIMAVRNMAAGK-DVREAIVKE-IPSAKVDAMELDVSSLASVRKFASEYN  103 (313)
Q Consensus        31 ~~lItGas-~giG~aia~~La~~G----~~V~l~~r~~~~~~-~~~~~l~~~-~~~~~~~~~~~D~s~~~~v~~~~~~~~  103 (313)
                      ++.|.||+ .|.+.+++..++...    ..+++.+.+++..+ +..+.+... ....+.......-+|..+   .++   
T Consensus         3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td~~~---al~---   76 (169)
T d1s6ya1           3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRR---ALD---   76 (169)
T ss_dssp             EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHH---HHT---
T ss_pred             EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecCCchh---hcC---
Confidence            46677764 567777776666542    38999999875422 122221110 001111122223344321   122   


Q ss_pred             hcCCCeeEEEEcccCCCCCCccCccchhhhhh------------hhhhHHHHHHHHHHHHHHHhhccCCCCCeEEEECCc
Q 021391          104 SQGRPLNILINNAGIMASPFMLSKDNIELQFA------------TNHLGHFLLTHLLLDTMKKTAQKSSREGRIVNVSSE  171 (313)
Q Consensus       104 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~------------~n~~~~~~l~~~~~~~l~~~~~~~~~~g~iv~isS~  171 (313)
                          .-|++|+++|....+.....+.+.....            ....-...+++.+.+.+.+.    .+++-++++|-.
T Consensus        77 ----gaDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~----~pda~~i~vtNP  148 (169)
T d1s6ya1          77 ----GADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEEL----CPDAWLINFTNP  148 (169)
T ss_dssp             ----TCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEECSSS
T ss_pred             ----CCCEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhc----CCCeEEEEeCCh
Confidence                5799999999753321000000000000            11223445667777777775    456778877754


Q ss_pred             c
Q 021391          172 A  172 (313)
Q Consensus       172 ~  172 (313)
                      .
T Consensus       149 v  149 (169)
T d1s6ya1         149 A  149 (169)
T ss_dssp             H
T ss_pred             H
Confidence            4

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=88.92  E-value=0.92  Score=36.42  Aligned_cols=34  Identities=21%  Similarity=0.315  Sum_probs=28.9

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHc-CCEEEEEe
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALR-GVHVIMAV   60 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~-G~~V~l~~   60 (313)
                      +++||+++|-|- |.+|..+|+.|+++ |++|+.+.
T Consensus        29 ~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vs   63 (239)
T d1gtma1          29 TLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVS   63 (239)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeecc
Confidence            489999999998 55999999999875 88877664

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=88.71  E-value=0.2  Score=39.46  Aligned_cols=44  Identities=18%  Similarity=0.216  Sum_probs=35.8

Q ss_pred             cchhccCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecC
Q 021391           18 AEEVTQGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRN   62 (313)
Q Consensus        18 ~~~~~~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~   62 (313)
                      ++...+..+++||+|+|.|++. -|-.+|..+++.+.+++...|.
T Consensus        21 ~~~~~~~~~~~gK~V~VvG~G~-Sa~dia~~~~~~~~~~~~~~~~   64 (235)
T d1w4xa2          21 GNWPHEPVDFSGQRVGVIGTGS-SGIQVSPQIAKQAAELFVFQRT   64 (235)
T ss_dssp             GGCCSSCCCCBTCEEEEECCSH-HHHHHHHHHHHHBSEEEEEESS
T ss_pred             CcCCCCCCCCCCCEEEEECCCc-cHHHHHHHHHhhhccccccccc
Confidence            3443455679999999998875 4899999999999998888876

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=88.40  E-value=1.3  Score=33.86  Aligned_cols=77  Identities=14%  Similarity=0.114  Sum_probs=55.4

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      .+++.+||=.|++.|  + .+..|+++|++|+.++.+++.++.+.+...... -..+.+...|+.+..-           
T Consensus        28 ~~~~grvLDiGcG~G--~-~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~-~~~~~~~~~d~~~~~~-----------   92 (198)
T d2i6ga1          28 VVAPGRTLDLGCGNG--R-NSLYLAANGYDVTAWDKNPASMANLERIKAAEG-LDNLQTDLVDLNTLTF-----------   92 (198)
T ss_dssp             TSCSCEEEEETCTTS--H-HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CTTEEEEECCTTTCCC-----------
T ss_pred             cCCCCcEEEECCCCC--H-HHHHHHHHhhhhccccCcHHHHHHHHHHhhhcc-ccchhhhheecccccc-----------
Confidence            356678999999765  3 667889999999999999887777655544432 2357888888776531           


Q ss_pred             CCCeeEEEEccc
Q 021391          106 GRPLNILINNAG  117 (313)
Q Consensus       106 ~g~id~lv~~ag  117 (313)
                      .+..|+++.+.-
T Consensus        93 ~~~fD~I~~~~~  104 (198)
T d2i6ga1          93 DGEYDFILSTVV  104 (198)
T ss_dssp             CCCEEEEEEESC
T ss_pred             cccccEEEEeee
Confidence            136899987654

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.27  E-value=0.26  Score=35.33  Aligned_cols=34  Identities=24%  Similarity=0.322  Sum_probs=30.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM   63 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~   63 (313)
                      .|+++|.||+ -||..+|..|++.|.+|.++.|..
T Consensus        22 pk~vvIvGgG-~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGAG-YIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcCC-ccHHHHHHHHhcCCcEEEEEeecc
Confidence            3789999876 699999999999999999999864

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=88.00  E-value=0.2  Score=39.30  Aligned_cols=40  Identities=23%  Similarity=0.141  Sum_probs=34.8

Q ss_pred             CCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCch
Q 021391           24 GIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMA   64 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~   64 (313)
                      ..++.||++.|.|. |.||+.+++.|...|.+|+..++...
T Consensus        40 ~~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   79 (199)
T d1dxya1          40 GKELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPM   79 (199)
T ss_dssp             CCCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccccceeeeeeec-ccccccccccccccceeeeccCCccc
Confidence            45789999999986 67999999999999999999998643

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=87.96  E-value=0.21  Score=40.80  Aligned_cols=41  Identities=27%  Similarity=0.259  Sum_probs=34.6

Q ss_pred             CCCCCCCEEEEeCCCCchHHHH-----HHHHHHcCCEEEEEecCch
Q 021391           24 GIDGTGLTAIVTGASSGIGTET-----ARVLALRGVHVIMAVRNMA   64 (313)
Q Consensus        24 ~~~~~gk~~lItGas~giG~ai-----a~~La~~G~~V~l~~r~~~   64 (313)
                      .+.=.|++++|+.|=||+|+.+     |..|+++|.+|.+++-+..
T Consensus        14 ~~~~~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          14 DIARNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             HHHTTSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             HhhcCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            3345678888888899999986     7999999999999999864

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=87.95  E-value=0.72  Score=32.50  Aligned_cols=34  Identities=18%  Similarity=0.194  Sum_probs=29.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM   63 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~   63 (313)
                      .|+++|.|| |-+|..+|..|++.|.+|.++.|..
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            478888876 6899999999999999999999864

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=87.94  E-value=1.8  Score=35.42  Aligned_cols=100  Identities=13%  Similarity=0.133  Sum_probs=65.9

Q ss_pred             CCCCCCCCCccch----hccCCCCCCCEEEEeCCCCc-hHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCce
Q 021391            8 GPSGFSASSTAEE----VTQGIDGTGLTAIVTGASSG-IGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKV   82 (313)
Q Consensus         8 ~~~~~~~~~~~~~----~~~~~~~~gk~~lItGas~g-iG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~   82 (313)
                      .|.-|.|.+..+.    ......-++.++|=.|+++| ||.+++..+  ...+|+.++.+...++.+.+.+.... -.++
T Consensus        84 ~~~VlIPRpeTE~lv~~~l~~~~~~~~~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~-~~~v  160 (274)
T d2b3ta1          84 SPATLIPRPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLA-IKNI  160 (274)
T ss_dssp             CTTSCCCCTTHHHHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHT-CCSE
T ss_pred             eccccccccchhhhhhhHhhhhcccccceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhC-cccc
Confidence            5666777665532    22334445567777777665 444444432  35699999999988887777765542 2368


Q ss_pred             EEEEccCCCHHHHHHHHHHHhhcCCCeeEEEEcccCCCC
Q 021391           83 DAMELDVSSLASVRKFASEYNSQGRPLNILINNAGIMAS  121 (313)
Q Consensus        83 ~~~~~D~s~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~  121 (313)
                      .+++.|+.+.-           ...++|++|.|+-+.+.
T Consensus       161 ~~~~~d~~~~~-----------~~~~fDlIvsNPPYi~~  188 (274)
T d2b3ta1         161 HILQSDWFSAL-----------AGQQFAMIVSNPPYIDE  188 (274)
T ss_dssp             EEECCSTTGGG-----------TTCCEEEEEECCCCBCT
T ss_pred             eeeeccccccc-----------CCCceeEEEecchhhhh
Confidence            99999987642           12479999999876643

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.90  E-value=0.82  Score=32.40  Aligned_cols=34  Identities=21%  Similarity=0.163  Sum_probs=29.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM   63 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~   63 (313)
                      -|+++|.|| |-||..+|..|++.|.+|.++.+..
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            378888876 6899999999999999999998764

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=87.72  E-value=0.15  Score=35.68  Aligned_cols=40  Identities=18%  Similarity=0.077  Sum_probs=32.7

Q ss_pred             cCCCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc
Q 021391           23 QGIDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM   63 (313)
Q Consensus        23 ~~~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~   63 (313)
                      ...+++||+|+|.|++ --|..+|..|+..+.+|++..|..
T Consensus        26 ~~~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          26 EPELFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             CGGGGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTT
T ss_pred             chhhcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecC
Confidence            4456899999999987 557899999999988877777654

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=87.60  E-value=1.3  Score=32.95  Aligned_cols=82  Identities=17%  Similarity=0.187  Sum_probs=52.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccC---CCHHHHHHHHHHHhh
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDV---SSLASVRKFASEYNS  104 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~---s~~~~v~~~~~~~~~  104 (313)
                      +|+++.|.+.|||.|--++..+...|.++--.  +    ++..++|++..|.....--.+|+   .+.+.+.++++.+.+
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~l--~----~~t~~~L~~~lp~~~~~~NPlD~~~~~~~~~~~~~l~~~~~   75 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLATL--E----EKTIEELRSFLPPMAAVKNPVDMIASARGEDYYRTAKLLLQ   75 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEECCC--C----HHHHHHHHHHSCTTCEESSEEECCTTCCHHHHHHHHHHHHH
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccCCC--C----HHHHHHHHHhCCCcccCCCcccccCCCCHHHHHHHHHHHHc
Confidence            68999999999999999999999999776433  2    23334444444432222223343   345666677766655


Q ss_pred             cCCCeeEEEEcc
Q 021391          105 QGRPLNILINNA  116 (313)
Q Consensus       105 ~~g~id~lv~~a  116 (313)
                      . ..+|.++...
T Consensus        76 d-~~vd~v~v~~   86 (163)
T d2csua3          76 D-PNVDMLIAIC   86 (163)
T ss_dssp             S-TTCSEEEEEE
T ss_pred             C-CCcCEEEEee
Confidence            4 4688766544

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=87.50  E-value=0.052  Score=40.60  Aligned_cols=79  Identities=11%  Similarity=0.099  Sum_probs=44.9

Q ss_pred             CCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCC-----CceEEEEccCCCHHHHHHHHHHHhhcCCCeeE
Q 021391           37 ASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPS-----AKVDAMELDVSSLASVRKFASEYNSQGRPLNI  111 (313)
Q Consensus        37 as~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~-----~~~~~~~~D~s~~~~v~~~~~~~~~~~g~id~  111 (313)
                      |+|-+|+++++.|.+.+..+.+..|+.++++++.+........     .....+.+-+.+ +++..+.+++..   +=.+
T Consensus         6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~~~~~~~~~~~~~DiVil~v~d-~~i~~v~~~l~~---~~~i   81 (153)
T d2i76a2           6 GTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGKAATLEKHPELNGVVFVIVPD-RYIKTVANHLNL---GDAV   81 (153)
T ss_dssp             SCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCCCCCSSCCCCC---CEEECSCT-TTHHHHHTTTCC---SSCC
T ss_pred             eCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccccccchhhhhccCcEEEEeccc-hhhhHHHhhhcc---ccee
Confidence            4677999999988664444568899999988887765432110     012223333333 456666665532   2247


Q ss_pred             EEEcccCC
Q 021391          112 LINNAGIM  119 (313)
Q Consensus       112 lv~~ag~~  119 (313)
                      +||+++..
T Consensus        82 vi~~s~~~   89 (153)
T d2i76a2          82 LVHCSGFL   89 (153)
T ss_dssp             EEECCSSS
T ss_pred             eeecccch
Confidence            78888754

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=87.25  E-value=2.8  Score=30.84  Aligned_cols=44  Identities=18%  Similarity=0.226  Sum_probs=31.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc--CCEEEEEe--cCchhHHHHHHHH
Q 021391           30 LTAIVTGASSGIGTETARVLALR--GVHVIMAV--RNMAAGKDVREAI   73 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~--G~~V~l~~--r~~~~~~~~~~~l   73 (313)
                      |++.|-|+||-||.+...-..+.  .++|+.+.  +|.+.+.+...+.
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f   49 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEF   49 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHH
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHH
Confidence            68999999999999999988886  46766553  4545555444443

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=87.13  E-value=0.29  Score=37.65  Aligned_cols=40  Identities=23%  Similarity=0.083  Sum_probs=33.3

Q ss_pred             CCCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchh
Q 021391           25 IDGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAA   65 (313)
Q Consensus        25 ~~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~   65 (313)
                      ..-++|+|+|.||+ --|...|..|+++|++|.+..++..-
T Consensus        39 ~~~~~k~V~IIGaG-PAGL~AA~~la~~G~~Vtl~E~~~~~   78 (179)
T d1ps9a3          39 PAVQKKNLAVVGAG-PAGLAFAINAAARGHQVTLFDAHSEI   78 (179)
T ss_dssp             SCSSCCEEEEECCS-HHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred             CCCCCcEEEEECcc-HHHHHHHHHHHhhccceEEEeccCcc
Confidence            34567999999875 56899999999999999999987543

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=87.00  E-value=1.2  Score=34.64  Aligned_cols=76  Identities=13%  Similarity=0.034  Sum_probs=54.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      +++||=.|++.|.-   +..|+++|++|+.++.+++-.+.+.+.+... ...++.++..|..+..-          ..+.
T Consensus        16 ~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~-~~~~i~~~~~d~~~l~~----------~~~~   81 (231)
T d1vl5a_          16 NEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGN-GHQQVEYVQGDAEQMPF----------TDER   81 (231)
T ss_dssp             CCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHT-TCCSEEEEECCC-CCCS----------CTTC
T ss_pred             cCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhccccc-ccccccccccccccccc----------cccc
Confidence            58999999998843   4678889999999999987776654444433 24578899999887420          1247


Q ss_pred             eeEEEEcccC
Q 021391          109 LNILINNAGI  118 (313)
Q Consensus       109 id~lv~~ag~  118 (313)
                      .|+++.+..+
T Consensus        82 fD~v~~~~~l   91 (231)
T d1vl5a_          82 FHIVTCRIAA   91 (231)
T ss_dssp             EEEEEEESCG
T ss_pred             cccccccccc
Confidence            9999877654

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=86.59  E-value=1.6  Score=35.48  Aligned_cols=78  Identities=13%  Similarity=0.082  Sum_probs=56.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHc-CCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALR-GVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      +|.+||=.|++.|.   ++..|+++ |++|+.++-++.-.+.+.+......-..++.++.+|+.+..          -..
T Consensus        67 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~----------~~~  133 (282)
T d2o57a1          67 RQAKGLDLGAGYGG---AARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP----------CED  133 (282)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS----------SCT
T ss_pred             CCCEEEEeCCCCcH---HHhhhhccCCcEEEEEeccchhhhhhhccccccccccccccccccccccc----------ccc
Confidence            68999999998773   45566664 88999999988777766666555544568999999987742          122


Q ss_pred             CCeeEEEEcccC
Q 021391          107 RPLNILINNAGI  118 (313)
Q Consensus       107 g~id~lv~~ag~  118 (313)
                      +..|+|+..-.+
T Consensus       134 ~sfD~V~~~~~l  145 (282)
T d2o57a1         134 NSYDFIWSQDAF  145 (282)
T ss_dssp             TCEEEEEEESCG
T ss_pred             cccchhhccchh
Confidence            479999876543

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.33  E-value=1.3  Score=37.09  Aligned_cols=76  Identities=17%  Similarity=0.112  Sum_probs=53.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhc
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQ  105 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~  105 (313)
                      .+|++||-.|++.|+   ++..+++.|+ +|+.++.++ .++.+.+.........++.++..|+.+..          ..
T Consensus        37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~----------~~  102 (328)
T d1g6q1_          37 FKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVH----------LP  102 (328)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC----------CS
T ss_pred             CCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhcc----------Cc
Confidence            589999999999884   4667788897 788888764 34444444444444567899999987742          11


Q ss_pred             CCCeeEEEEcc
Q 021391          106 GRPLNILINNA  116 (313)
Q Consensus       106 ~g~id~lv~~a  116 (313)
                      ....|+++...
T Consensus       103 ~~~~D~i~se~  113 (328)
T d1g6q1_         103 FPKVDIIISEW  113 (328)
T ss_dssp             SSCEEEEEECC
T ss_pred             ccceeEEEEEe
Confidence            24789998765

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=86.25  E-value=0.31  Score=37.21  Aligned_cols=35  Identities=17%  Similarity=0.138  Sum_probs=29.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCE-EEEEecCch
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVH-VIMAVRNMA   64 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~-V~l~~r~~~   64 (313)
                      +|+|+|.|| |-.|...|..|+++|++ |.+..|...
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            688888887 56799999999999995 989888653

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=86.21  E-value=4  Score=30.16  Aligned_cols=76  Identities=16%  Similarity=-0.004  Sum_probs=41.5

Q ss_pred             EEEEeCCCCchHHHHHHH-HHH-c----CCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           31 TAIVTGASSGIGTETARV-LAL-R----GVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        31 ~~lItGas~giG~aia~~-La~-~----G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      ++.|.||++ +|...+-. |++ .    +..+++.+.++++++... .+............. - ++..   +.+     
T Consensus         2 KIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~-d~~~~~~~~~~~~~~-t-~~~~---~~l-----   69 (162)
T d1up7a1           2 RIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVV-DFVKRLVKDRFKVLI-S-DTFE---GAV-----   69 (162)
T ss_dssp             EEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHH-HHHHHHHTTSSEEEE-C-SSHH---HHH-----
T ss_pred             EEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHH-HHHHhhhccCceEEE-e-cCcc---ccc-----
Confidence            578888865 45444432 322 1    358999999998876544 333221111222221 1 2221   222     


Q ss_pred             cCCCeeEEEEcccCCC
Q 021391          105 QGRPLNILINNAGIMA  120 (313)
Q Consensus       105 ~~g~id~lv~~ag~~~  120 (313)
                        ..-|++|..+|...
T Consensus        70 --~~aDvVVita~~~~   83 (162)
T d1up7a1          70 --VDAKYVIFQFRPGG   83 (162)
T ss_dssp             --TTCSEEEECCCTTH
T ss_pred             --CCCCEEEEecccCC
Confidence              26799999999753

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=85.94  E-value=1.1  Score=35.38  Aligned_cols=82  Identities=15%  Similarity=0.115  Sum_probs=58.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHc-C----CEEEEEecCchhHHHHHHHHHHh----CCCCceEEEEccCCCHHHHHHH
Q 021391           28 TGLTAIVTGASSGIGTETARVLALR-G----VHVIMAVRNMAAGKDVREAIVKE----IPSAKVDAMELDVSSLASVRKF   98 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~-G----~~V~l~~r~~~~~~~~~~~l~~~----~~~~~~~~~~~D~s~~~~v~~~   98 (313)
                      +|.+||..|+++|--.++..+++.. |    .+|+.+.++++-.+...+.+...    ..-.++.++..|..+-      
T Consensus        80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~------  153 (223)
T d1r18a_          80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKG------  153 (223)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGC------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEecccccc------
Confidence            6799999999999888888888753 4    48999999887666655444321    1123688888887642      


Q ss_pred             HHHHhhcCCCeeEEEEcccCC
Q 021391           99 ASEYNSQGRPLNILINNAGIM  119 (313)
Q Consensus        99 ~~~~~~~~g~id~lv~~ag~~  119 (313)
                          ....++.|.++.+++..
T Consensus       154 ----~~~~~~fD~Iiv~~a~~  170 (223)
T d1r18a_         154 ----YPPNAPYNAIHVGAAAP  170 (223)
T ss_dssp             ----CGGGCSEEEEEECSCBS
T ss_pred             ----cccccceeeEEEEeech
Confidence                12345899999988753

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=85.80  E-value=1.9  Score=34.08  Aligned_cols=77  Identities=13%  Similarity=0.061  Sum_probs=55.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHc-CCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALR-GVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      .|++||=.|++.|   .++..|+++ |++|+.++.++.-.+...+.......+.++.++..|+.+..           ..
T Consensus        33 pg~~VLDiGCG~G---~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~~~~-----------~~   98 (245)
T d1nkva_          33 PGTRILDLGSGSG---EMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYV-----------AN   98 (245)
T ss_dssp             TTCEEEEETCTTC---HHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCC-----------CS
T ss_pred             CCCEEEEEcCCCC---HHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhhHHhhcc-----------cc
Confidence            4799998998877   345556654 88999999988777766555555444567999999987631           12


Q ss_pred             CCeeEEEEcccC
Q 021391          107 RPLNILINNAGI  118 (313)
Q Consensus       107 g~id~lv~~ag~  118 (313)
                      +..|.++..-.+
T Consensus        99 ~~fD~v~~~~~~  110 (245)
T d1nkva_          99 EKCDVAACVGAT  110 (245)
T ss_dssp             SCEEEEEEESCG
T ss_pred             CceeEEEEEehh
Confidence            478988876544

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=85.73  E-value=0.53  Score=37.15  Aligned_cols=33  Identities=30%  Similarity=0.472  Sum_probs=28.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNM   63 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~   63 (313)
                      |.|+|.|| |-.|.++|..|+++|++|.++.|+.
T Consensus         7 ~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           7 KRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            56888876 5679999999999999999999864

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=85.65  E-value=0.83  Score=35.78  Aligned_cols=82  Identities=10%  Similarity=0.079  Sum_probs=55.0

Q ss_pred             CCCC-CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHH
Q 021391           24 GIDG-TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEY  102 (313)
Q Consensus        24 ~~~~-~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~  102 (313)
                      .+.+ .|.+||=.|++.|.-......+...| +|+.++.+++.++.+.+....   ..++.++..|..++......    
T Consensus        51 ~l~lkpg~~VLDlGcG~G~~~~~la~~v~~g-~V~gvDis~~~i~~a~~~a~~---~~ni~~i~~d~~~~~~~~~~----  122 (209)
T d1nt2a_          51 RLKLRGDERVLYLGAASGTTVSHLADIVDEG-IIYAVEYSAKPFEKLLELVRE---RNNIIPLLFDASKPWKYSGI----  122 (209)
T ss_dssp             CCCCCSSCEEEEETCTTSHHHHHHHHHTTTS-EEEEECCCHHHHHHHHHHHHH---CSSEEEECSCTTCGGGTTTT----
T ss_pred             cCCCCCCCEEEEeCCcCCHHHHHHHHhccCC-eEEEEeCCHHHHHHHHHHhhc---cCCceEEEeeccCccccccc----
Confidence            3454 47999999999885433333333444 899999998888776665443   34788999999887643222    


Q ss_pred             hhcCCCeeEEEEcc
Q 021391          103 NSQGRPLNILINNA  116 (313)
Q Consensus       103 ~~~~g~id~lv~~a  116 (313)
                         +..+|++++..
T Consensus       123 ---~~~vd~v~~~~  133 (209)
T d1nt2a_         123 ---VEKVDLIYQDI  133 (209)
T ss_dssp             ---CCCEEEEEECC
T ss_pred             ---cceEEEEEecc
Confidence               23677777653

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=85.61  E-value=0.42  Score=38.11  Aligned_cols=35  Identities=31%  Similarity=0.184  Sum_probs=29.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM   63 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~   63 (313)
                      ..++|+|.||+ --|..+|..|+++|.+|++..|+.
T Consensus         3 ~~~kV~IiGaG-~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           3 TTDRIAVVGGS-ISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CCSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCcEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence            45789999986 457888889999999999999864

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=85.57  E-value=4.2  Score=28.24  Aligned_cols=84  Identities=18%  Similarity=0.153  Sum_probs=51.3

Q ss_pred             CEEEEeCCC---CchHHHHHHHHHHcCCEEEEEecCchhHH--HHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           30 LTAIVTGAS---SGIGTETARVLALRGVHVIMAVRNMAAGK--DVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        30 k~~lItGas---~giG~aia~~La~~G~~V~l~~r~~~~~~--~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      |++.|.|+|   +-.|..+.+.|.+.|++|+.+..+.+...  .....+.+ . ...+..+ .=...++.+..+++++.+
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~~-l-p~~~D~v-vi~vp~~~~~~~l~~~~~   78 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRE-L-PKDVDVI-VFVVPPKVGLQVAKEAVE   78 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGG-S-CTTCCEE-EECSCHHHHHHHHHHHHH
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccccCccccccchh-c-cccceEE-EEEeCHHHHHHHHHHHHh
Confidence            789999999   56899999999999999998865533211  11111111 1 1122221 113456677778887766


Q ss_pred             cCCCeeEEEEcccC
Q 021391          105 QGRPLNILINNAGI  118 (313)
Q Consensus       105 ~~g~id~lv~~ag~  118 (313)
                      .  ++..++...|.
T Consensus        79 ~--g~k~v~~~~g~   90 (116)
T d1y81a1          79 A--GFKKLWFQPGA   90 (116)
T ss_dssp             T--TCCEEEECTTS
T ss_pred             c--CCceEEeccch
Confidence            5  34566665554

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=85.53  E-value=0.34  Score=38.15  Aligned_cols=35  Identities=20%  Similarity=0.319  Sum_probs=30.4

Q ss_pred             CCEEEEeCCCCchHHH-----HHHHHHHcCCEEEEEecCc
Q 021391           29 GLTAIVTGASSGIGTE-----TARVLALRGVHVIMAVRNM   63 (313)
Q Consensus        29 gk~~lItGas~giG~a-----ia~~La~~G~~V~l~~r~~   63 (313)
                      ||++.|+|+-||.|+.     +|..|+++|.+|.+++-|.
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D~   41 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL   41 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            6899999999999985     6778889999999999764

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=85.08  E-value=0.7  Score=32.46  Aligned_cols=36  Identities=28%  Similarity=0.366  Sum_probs=31.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM   63 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~   63 (313)
                      ..+|.++|.|| |-+|..+|..|++.|.+|.++.|.+
T Consensus        20 ~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          20 EPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccc
Confidence            35788888875 6899999999999999999998864

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=85.06  E-value=0.61  Score=32.76  Aligned_cols=33  Identities=24%  Similarity=0.130  Sum_probs=28.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRNM   63 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~~   63 (313)
                      |+++|.|| |-+|..+|..|++.|.+|.++.|..
T Consensus        22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence            67777765 6899999999999999999998864

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=84.96  E-value=0.33  Score=39.87  Aligned_cols=35  Identities=26%  Similarity=0.258  Sum_probs=30.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM   63 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~   63 (313)
                      +.|+|+|.||+= -|...|..|+++|++|.++.++.
T Consensus        29 ~pkkV~IIGaG~-aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGAGM-AGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEECCBH-HHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECCCH-HHHHHHHHHHHCCCCEEEEeCCC
Confidence            558999999874 48999999999999999998764

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=84.78  E-value=1.8  Score=34.81  Aligned_cols=82  Identities=12%  Similarity=0.148  Sum_probs=57.1

Q ss_pred             cCCC-CCCCEEEEeCCCCc-hHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHH
Q 021391           23 QGID-GTGLTAIVTGASSG-IGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFAS  100 (313)
Q Consensus        23 ~~~~-~~gk~~lItGas~g-iG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~  100 (313)
                      ..++ -.|.+||=.|+++| +...+++.+.. +.+|+.++++++.++.+.+.+.......++.+...|+.+.-       
T Consensus        79 ~~l~i~pG~rVLEiG~GsG~lt~~la~~v~~-~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~~~-------  150 (250)
T d1yb2a1          79 MRCGLRPGMDILEVGVGSGNMSSYILYALNG-KGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFI-------  150 (250)
T ss_dssp             --CCCCTTCEEEEECCTTSHHHHHHHHHHTT-SSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCC-------
T ss_pred             HHcCCCCcCEEEEeeeeCcHHHHHHHHHhCC-CcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeeeccc-------
Confidence            3344 36799999999877 34555555443 44999999999888888877766544567899999987631       


Q ss_pred             HHhhcCCCeeEEEEcc
Q 021391          101 EYNSQGRPLNILINNA  116 (313)
Q Consensus       101 ~~~~~~g~id~lv~~a  116 (313)
                          ....+|.++.+.
T Consensus       151 ----~~~~fD~V~ld~  162 (250)
T d1yb2a1         151 ----SDQMYDAVIADI  162 (250)
T ss_dssp             ----CSCCEEEEEECC
T ss_pred             ----ccceeeeeeecC
Confidence                123689988653

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=84.69  E-value=1.3  Score=33.99  Aligned_cols=42  Identities=17%  Similarity=0.141  Sum_probs=34.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHH
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVRE   71 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~   71 (313)
                      .-.+||.|| |-.|.+.++-....|++|.+.|.+.+..+++.+
T Consensus        29 pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~   70 (183)
T d1l7da1          29 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVES   70 (183)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH
T ss_pred             CcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHH
Confidence            457888887 467899999999999999999999887776543

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=84.68  E-value=0.95  Score=31.85  Aligned_cols=37  Identities=27%  Similarity=0.127  Sum_probs=31.2

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM   63 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~   63 (313)
                      +-..++++|.|| |-||..+|..|++.|.+|.++.+..
T Consensus        19 ~~~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          19 QNVPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             SSCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             ccCCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            334588888886 6899999999999999999998764

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=84.44  E-value=0.23  Score=37.67  Aligned_cols=86  Identities=12%  Similarity=0.131  Sum_probs=53.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc-CCEEEEE-ecCchh-HHHHHHHHHHhCC------------CCceEEEEccCCCHHH
Q 021391           30 LTAIVTGASSGIGTETARVLALR-GVHVIMA-VRNMAA-GKDVREAIVKEIP------------SAKVDAMELDVSSLAS   94 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~-G~~V~l~-~r~~~~-~~~~~~~l~~~~~------------~~~~~~~~~D~s~~~~   94 (313)
                      -++.|.|++|-+|+++++...+. ++.++.. +|.... ...-..++....+            -..+ -+..|+|.++.
T Consensus         5 ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~-DViIDFs~p~~   83 (162)
T d1diha1           5 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDF-DVFIDFTRPEG   83 (162)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSC-SEEEECSCHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhccc-ceEEEeccHHH
Confidence            46899999999999999999886 5564433 332211 0000000000000            0011 26689999999


Q ss_pred             HHHHHHHHhhcCCCeeEEEEcccC
Q 021391           95 VRKFASEYNSQGRPLNILINNAGI  118 (313)
Q Consensus        95 v~~~~~~~~~~~g~id~lv~~ag~  118 (313)
                      +...++.+.+.  ++.+|+-..|+
T Consensus        84 ~~~~~~~a~~~--~~~~ViGTTG~  105 (162)
T d1diha1          84 TLNHLAFCRQH--GKGMVIGTTGF  105 (162)
T ss_dssp             HHHHHHHHHHT--TCEEEECCCCC
T ss_pred             HHHHHHHHHhc--cceeEEecCCC
Confidence            99999877665  67888888885

>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methylase YhhF
species: Escherichia coli [TaxId: 562]

Probab=84.27  E-value=4.4  Score=30.47  Aligned_cols=79  Identities=13%  Similarity=0.067  Sum_probs=55.0

Q ss_pred             CCCCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           26 DGTGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        26 ~~~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      .+.|+++|=.+|++|   ++..+.+.+|+ +|+.++.+.+..+.+.+.+.... ..+..++..|+         ++.+..
T Consensus        41 ~~~~~~vLDlfaGsG---~~giealsrGa~~v~~VE~~~~a~~~~k~N~~~~~-~~~~~ii~~d~---------~~~l~~  107 (183)
T d2fpoa1          41 VIVDAQCLDCFAGSG---ALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLK-AGNARVVNSNA---------MSFLAQ  107 (183)
T ss_dssp             HHTTCEEEETTCTTC---HHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTT-CCSEEEECSCH---------HHHHSS
T ss_pred             ccchhhhhhhhcccc---ceeeeEEecCcceeEEEEEeechhhHHHHHHhhcc-ccceeeeeecc---------cccccc
Confidence            478899986666655   45556778898 79999999988887777766532 34567777663         222333


Q ss_pred             cCCCeeEEEEccc
Q 021391          105 QGRPLNILINNAG  117 (313)
Q Consensus       105 ~~g~id~lv~~ag  117 (313)
                      .....|+++..+-
T Consensus       108 ~~~~fDlIf~DPP  120 (183)
T d2fpoa1         108 KGTPHNIVFVDPP  120 (183)
T ss_dssp             CCCCEEEEEECCS
T ss_pred             cccccCEEEEcCc
Confidence            4557999999874

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=83.99  E-value=0.49  Score=35.17  Aligned_cols=35  Identities=23%  Similarity=0.335  Sum_probs=29.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC--EEEEEecCc
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGV--HVIMAVRNM   63 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~--~V~l~~r~~   63 (313)
                      +||+++|.||+ -.|..+|..|.+.|.  +|+++.+++
T Consensus         1 ~gkrivIvGgG-~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGG-TGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECcc-HHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            58999999985 568999999999885  788887764

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=83.85  E-value=0.49  Score=39.28  Aligned_cols=33  Identities=21%  Similarity=0.249  Sum_probs=24.0

Q ss_pred             CEEEEeCCCCc--h--HHHHHHHHHHcCCEEEEEecC
Q 021391           30 LTAIVTGASSG--I--GTETARVLALRGVHVIMAVRN   62 (313)
Q Consensus        30 k~~lItGas~g--i--G~aia~~La~~G~~V~l~~r~   62 (313)
                      |+|||++|+.|  +  ..+++++|.++|+.|..++..
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            56777665434  2  347899999999999887643

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.70  E-value=0.46  Score=36.87  Aligned_cols=31  Identities=19%  Similarity=0.216  Sum_probs=26.4

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCEEEEEecCc
Q 021391           32 AIVTGASSGIGTETARVLALRGVHVIMAVRNM   63 (313)
Q Consensus        32 ~lItGas~giG~aia~~La~~G~~V~l~~r~~   63 (313)
                      |+|.| +|--|..+|..|+++|.+|.++.++.
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            67777 45668999999999999999998864

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=82.59  E-value=1.8  Score=34.40  Aligned_cols=79  Identities=13%  Similarity=0.050  Sum_probs=55.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcC
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGV-HVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQG  106 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~  106 (313)
                      +|++||=.|++.|   ..+..|++.|+ +|+.++.+++.++.+.+.........++.+++.|.....-         ...
T Consensus        24 ~~~~VLDlGCG~G---~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~---------~~~   91 (252)
T d1ri5a_          24 RGDSVLDLGCGKG---GDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHM---------DLG   91 (252)
T ss_dssp             TTCEEEEETCTTT---TTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCC---------CCS
T ss_pred             CcCEEEEecccCc---HHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcc---------ccc
Confidence            6789999999877   24567777786 7999999988877776555443334578999999854321         112


Q ss_pred             CCeeEEEEcccC
Q 021391          107 RPLNILINNAGI  118 (313)
Q Consensus       107 g~id~lv~~ag~  118 (313)
                      +..|+|+.+-++
T Consensus        92 ~~fD~V~~~~~l  103 (252)
T d1ri5a_          92 KEFDVISSQFSF  103 (252)
T ss_dssp             SCEEEEEEESCG
T ss_pred             ccceEEEEccee
Confidence            468998876654

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=82.55  E-value=1.5  Score=35.48  Aligned_cols=75  Identities=15%  Similarity=0.091  Sum_probs=53.4

Q ss_pred             CCCCEEEEeCCCCc-hHHHHHHHHHHcC-CEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhh
Q 021391           27 GTGLTAIVTGASSG-IGTETARVLALRG-VHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNS  104 (313)
Q Consensus        27 ~~gk~~lItGas~g-iG~aia~~La~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~  104 (313)
                      -.|+++|-.||+.| ++.    .+|++| .+|+.++.|+...+.+.+.+....-..++.++..|..+..           
T Consensus       106 ~~g~~VlD~~aG~G~~~l----~~a~~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~~~~-----------  170 (260)
T d2frna1         106 KPDELVVDMFAGIGHLSL----PIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP-----------  170 (260)
T ss_dssp             CTTCEEEETTCTTTTTHH----HHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC-----------
T ss_pred             CCccEEEECcceEcHHHH----HHHHhCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchHHhc-----------
Confidence            37899999888855 333    344456 4999999999888877777665433557899999987532           


Q ss_pred             cCCCeeEEEEcc
Q 021391          105 QGRPLNILINNA  116 (313)
Q Consensus       105 ~~g~id~lv~~a  116 (313)
                      ..+..|.+|.+.
T Consensus       171 ~~~~~D~Ii~~~  182 (260)
T d2frna1         171 GENIADRILMGY  182 (260)
T ss_dssp             CCSCEEEEEECC
T ss_pred             cCCCCCEEEECC
Confidence            124689888764

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=82.39  E-value=0.58  Score=39.12  Aligned_cols=35  Identities=23%  Similarity=0.243  Sum_probs=29.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM   63 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~   63 (313)
                      +.|.++|.||+ --|..+|..|++.|.+|.+..++.
T Consensus         1 k~KKI~IIGaG-~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           1 KSKKILIVGAG-FSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHhCCCCEEEEECCC
Confidence            46899999876 457889999999999999998765

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=82.00  E-value=0.97  Score=31.50  Aligned_cols=34  Identities=21%  Similarity=0.170  Sum_probs=29.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM   63 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~   63 (313)
                      .|+++|.| +|-+|..+|..|++.|.+|.++.+..
T Consensus        21 p~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHHhhcccceEEEeeec
Confidence            47777776 47899999999999999999998754

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=81.83  E-value=1  Score=32.38  Aligned_cols=77  Identities=18%  Similarity=0.135  Sum_probs=51.8

Q ss_pred             CCCEEEEeCCCC----------chHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHH
Q 021391           28 TGLTAIVTGASS----------GIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRK   97 (313)
Q Consensus        28 ~gk~~lItGas~----------giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~   97 (313)
                      .-|++||.|++.          --+.+.++.|.+.|++++++..|++....-.+      ..+++.+..+   ..+++..
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d------~aD~lYfePl---t~e~v~~   76 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPE------MADATYIEPI---HWEVVRK   76 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGG------GSSEEECSCC---CHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChh------hcceeeeecC---CHHHHHH
Confidence            448899999863          34678889999999999999988765432111      0345554333   3455666


Q ss_pred             HHHHHhhcCCCeeEEEEcccC
Q 021391           98 FASEYNSQGRPLNILINNAGI  118 (313)
Q Consensus        98 ~~~~~~~~~g~id~lv~~ag~  118 (313)
                      .+++-     ++|.++...|.
T Consensus        77 Ii~~E-----~pd~il~~~GG   92 (127)
T d1a9xa3          77 IIEKE-----RPDAVLPTMGG   92 (127)
T ss_dssp             HHHHH-----CCSEEECSSSH
T ss_pred             HHHHh-----CcCCeEEEeee
Confidence            66653     78999887764

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=81.79  E-value=0.85  Score=36.01  Aligned_cols=37  Identities=27%  Similarity=0.316  Sum_probs=31.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCch
Q 021391           27 GTGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMA   64 (313)
Q Consensus        27 ~~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~   64 (313)
                      -.+|+++|.||+ --|...|..|+++|++|.++.++.+
T Consensus        47 ~~~k~VvIIGaG-pAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          47 KNKDSVLIVGAG-PSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             SSCCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCceEEEEccc-HHHHHHHHHHHHhccceeeEeeccc
Confidence            477999999986 4489999999999999999987653

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=81.71  E-value=5.7  Score=27.40  Aligned_cols=81  Identities=15%  Similarity=0.262  Sum_probs=54.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCchhHHHHHHHHHHhCCCCceEEEEccCCCHHHHHHHHHHHhhcCCC
Q 021391           29 GLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMAAGKDVREAIVKEIPSAKVDAMELDVSSLASVRKFASEYNSQGRP  108 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~s~~~~v~~~~~~~~~~~g~  108 (313)
                      +|+|||.==...+-..+.+.|.+.|++|..+. +   .+++.+.+.+..  ..+.++-..+-+.+. -.+++++++....
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~-~---g~eal~~~~~~~--~dlillD~~mP~~~G-~el~~~lr~~~~~   73 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAA-N---GLQALDIVTKER--PDLVLLDMKIPGMDG-IEILKRMKVIDEN   73 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEES-S---HHHHHHHHHHHC--CSEEEEESCCTTCCH-HHHHHHHHHHCTT
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeC-C---HHHHHHHHHhCC--CCEEEEeccCCCCCH-HHHHHHHHHhCCC
Confidence            57899999999999999999999999988654 3   333344444442  345555555556554 3566677766656


Q ss_pred             eeEEEEcc
Q 021391          109 LNILINNA  116 (313)
Q Consensus       109 id~lv~~a  116 (313)
                      +-+++..+
T Consensus        74 ~pvi~lt~   81 (119)
T d1peya_          74 IRVIIMTA   81 (119)
T ss_dssp             CEEEEEES
T ss_pred             CcEEEEec
Confidence            66666654

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=81.25  E-value=0.85  Score=32.32  Aligned_cols=35  Identities=26%  Similarity=0.200  Sum_probs=30.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNM   63 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~   63 (313)
                      -.|+++|.|| |-||..+|..|++.|.+|.++.|..
T Consensus        24 ~p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          24 IPKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             CCSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             cCCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcc
Confidence            3478888876 6899999999999999999998864

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=81.18  E-value=1.1  Score=32.12  Aligned_cols=36  Identities=22%  Similarity=0.218  Sum_probs=30.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCEEEEEecCch
Q 021391           28 TGLTAIVTGASSGIGTETARVLALRGVHVIMAVRNMA   64 (313)
Q Consensus        28 ~gk~~lItGas~giG~aia~~La~~G~~V~l~~r~~~   64 (313)
                      ++|+++|.|| |-+|..+|..|++.|.+|.++.+...
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence            5688888865 78999999999999999999988643

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=80.76  E-value=0.57  Score=36.73  Aligned_cols=35  Identities=23%  Similarity=0.278  Sum_probs=29.8

Q ss_pred             CEEEEeCCCCchHHH-----HHHHHHHcCCEEEEEecCch
Q 021391           30 LTAIVTGASSGIGTE-----TARVLALRGVHVIMAVRNMA   64 (313)
Q Consensus        30 k~~lItGas~giG~a-----ia~~La~~G~~V~l~~r~~~   64 (313)
                      |+|.|+++-||.|+.     +|..|+++|.+|.+++-+..
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~~   41 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADIT   41 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            789999999999975     57788999999999987653

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=80.70  E-value=0.66  Score=37.99  Aligned_cols=32  Identities=25%  Similarity=0.352  Sum_probs=26.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-EEEEEecCc
Q 021391           31 TAIVTGASSGIGTETARVLALRGV-HVIMAVRNM   63 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G~-~V~l~~r~~   63 (313)
                      .|+|.||+ -+|.++|.+|+++|. +|.+++|+.
T Consensus         3 dViIIGaG-i~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGAG-IVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECCS-HHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECcC-HHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            36777764 889999999999997 599998863

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=80.36  E-value=0.56  Score=37.60  Aligned_cols=32  Identities=22%  Similarity=0.279  Sum_probs=27.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCEEEEEecCc
Q 021391           31 TAIVTGASSGIGTETARVLALRGVHVIMAVRNM   63 (313)
Q Consensus        31 ~~lItGas~giG~aia~~La~~G~~V~l~~r~~   63 (313)
                      .|+|.|| |--|...|..|+++|++|+++.++.
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            5888888 5568999999999999999998753

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=80.11  E-value=2.1  Score=31.53  Aligned_cols=43  Identities=28%  Similarity=0.315  Sum_probs=31.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHc--CCEEEEEe--cCchhHHHHHH
Q 021391           29 GLTAIVTGASSGIGTETARVLALR--GVHVIMAV--RNMAAGKDVRE   71 (313)
Q Consensus        29 gk~~lItGas~giG~aia~~La~~--G~~V~l~~--r~~~~~~~~~~   71 (313)
                      -|++.|.|+||-||.++..-+.+.  .++|+.+.  +|.+.+.+...
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~   48 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAK   48 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHH
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHH
Confidence            389999999999999999888775  56766653  44444444333

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=80.06  E-value=2  Score=30.26  Aligned_cols=32  Identities=38%  Similarity=0.394  Sum_probs=27.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCEEEEEecC
Q 021391           30 LTAIVTGASSGIGTETARVLALRGVHVIMAVRN   62 (313)
Q Consensus        30 k~~lItGas~giG~aia~~La~~G~~V~l~~r~   62 (313)
                      ++++|.|| |-||..+|..|.+.|.+|.++.|+
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            56777775 689999999999999999999875