Your job contains 1 sequence.
>021394
MGSLQGPVFCPAVRARQGGLYNTVPSTGPVMKARFFRSELWGFKGLTAVKTKVGVFTRQQ
NARKCKIVQCTFSSSSNGNGSMAENFNENDEDFVNSSVVEAVEVKSGADGFMIKMRDGRH
LRCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAMRNVQIARPTL
YQVVKEMIEKMGYEVRLVRVTKRVHEAYFAQLYLTKVGNETECVSFDLRPSDAINIAVRC
KVPIQVNKYLAYSDGMRVIESGKLSTHSPGSDGLLFTELDNERERSLIRSNMVPGQVVSR
ALIQRSLILCAIC
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 021394
(313 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2018422 - symbol:BBD1 "AT1G75380" species:3702... 1004 3.0e-101 1
TAIR|locus:2013164 - symbol:BBD2 "bifunctional nuclease i... 959 1.8e-96 1
TAIR|locus:2156842 - symbol:AT5G66050 species:3702 "Arabi... 205 6.5e-15 1
UNIPROTKB|Q50604 - symbol:MT1877 "Uncharacterized protein... 112 5.4e-05 1
>TAIR|locus:2018422 [details] [associations]
symbol:BBD1 "AT1G75380" species:3702 "Arabidopsis
thaliana" [GO:0004518 "nuclease activity" evidence=IDA] [GO:0050832
"defense response to fungus" evidence=IMP] [GO:0031063 "regulation
of histone deacetylation" evidence=IGI] [GO:0043565
"sequence-specific DNA binding" evidence=IDA;IPI] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IGI]
InterPro:IPR001943 InterPro:IPR003729 Pfam:PF02151 Pfam:PF02577
PROSITE:PS50151 PROSITE:PS51658 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0050832 GO:GO:0004518
EMBL:AC023754 EMBL:AY054232 EMBL:AY066045 EMBL:AY087417
IPI:IPI00543627 PIR:C96784 RefSeq:NP_177671.1 RefSeq:NP_849890.1
RefSeq:NP_849891.1 UniGene:At.23222 ProteinModelPortal:Q9FWS6
SMR:Q9FWS6 STRING:Q9FWS6 EnsemblPlants:AT1G75380.1
EnsemblPlants:AT1G75380.2 EnsemblPlants:AT1G75380.3 GeneID:843874
KEGG:ath:AT1G75380 TAIR:At1g75380 eggNOG:COG1259
HOGENOM:HOG000029667 InParanoid:Q9FWS6 OMA:LQGPVIC PhylomeDB:Q9FWS6
ProtClustDB:CLSN2682514 Genevestigator:Q9FWS6 SUPFAM:SSF103256
Uniprot:Q9FWS6
Length = 325
Score = 1004 (358.5 bits), Expect = 3.0e-101, P = 3.0e-101
Identities = 208/282 (73%), Positives = 229/282 (81%)
Query: 1 MGSLQGPVFCPAVRARQ-GGLYNTVPSTGPVMKARFFRSELWGFKGLTAVKTKVGVFTRQ 59
M S+Q PV CPA+R RQ G + V TG +K R S+ WG + VK++ G T
Sbjct: 1 MRSVQAPVVCPAIRPRQVGACASLVNYTG--LKPR---SQFWGNR-TKGVKSQ-GT-TTT 52
Query: 60 QNARKC-KIVQCTFSSSSNGNGSMAXXXXXXXXXXVNSSVVEAVEVKSGADGFMIKMRDG 118
R C K ++C FSS S+GNGS A VNSSVVEAVEVKSGADGFM+KMRDG
Sbjct: 53 ITLRLCNKSIKCVFSSHSDGNGSTAENFNENDEEYVNSSVVEAVEVKSGADGFMVKMRDG 112
Query: 119 RHLRCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAMRNVQIARP 178
R LRCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAM NVQIARP
Sbjct: 113 RQLRCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAMTNVQIARP 172
Query: 179 TLYQVVKEMIEKMGYEVRLVRVTKRVHEAYFAQLYLTKVGNETECVSFDLRPSDAINIAV 238
T+YQVVKEM++KMGYEVRLVRVTKRVHEAYFAQL+L+KVGN +ECVSFDLRPSDAINIAV
Sbjct: 173 TMYQVVKEMVDKMGYEVRLVRVTKRVHEAYFAQLFLSKVGNASECVSFDLRPSDAINIAV 232
Query: 239 RCKVPIQVNKYLAYSDGMRVIESGKLSTHSPGSDGLLFTELD 280
RCK+PIQVNKYLAYSDGMRVIESGK+ST +P SDGLLFTE D
Sbjct: 233 RCKIPIQVNKYLAYSDGMRVIESGKISTPAPASDGLLFTEQD 274
>TAIR|locus:2013164 [details] [associations]
symbol:BBD2 "bifunctional nuclease in basal defense
response 2" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0006289 "nucleotide-excision repair"
evidence=IEA] [GO:0009611 "response to wounding" evidence=ISS]
InterPro:IPR001943 InterPro:IPR003729 Pfam:PF02151 Pfam:PF02577
PROSITE:PS50151 PROSITE:PS51658 EMBL:CP002684 GO:GO:0005634
GO:GO:0090305 GO:GO:0004518 HOGENOM:HOG000029667
ProtClustDB:CLSN2682514 SUPFAM:SSF103256 EMBL:AC024609
EMBL:AY035016 EMBL:AY059082 EMBL:AK317508 EMBL:AY088015
IPI:IPI00546371 IPI:IPI00547716 PIR:D86329 RefSeq:NP_001031068.1
RefSeq:NP_564093.1 UniGene:At.16184 ProteinModelPortal:Q93VH2
SMR:Q93VH2 STRING:Q93VH2 EnsemblPlants:AT1G19660.1
EnsemblPlants:AT1G19660.2 GeneID:838553 KEGG:ath:AT1G19660
TAIR:At1g19660 InParanoid:Q93VH2 OMA:TRVHEAY PhylomeDB:Q93VH2
Genevestigator:Q93VH2 Uniprot:Q93VH2
Length = 329
Score = 959 (342.6 bits), Expect = 1.8e-96, P = 1.8e-96
Identities = 192/280 (68%), Positives = 223/280 (79%)
Query: 1 MGSLQGPVFCPAVRARQGGLYNTVPSTGPVMKARFFRSELWGFKGLTAVKTKVGVFTRQQ 60
M SLQ PV CP+VR RQ G+ + + V K R R + WG + K++ +
Sbjct: 1 MRSLQAPVVCPSVRPRQLGVSALLVNCS-VSKTRSLRKQFWGNQTKND-KSQAATVNLRL 58
Query: 61 NARKCKIVQCTFSSSSNGNGSMAXXXXXXXXXXVNSSVVEAVEVKSGADGFMIKMRDGRH 120
+ R+ K ++C FSS S+G GS A V SSV+EAVEVKSG DGFM+KM+DGR
Sbjct: 59 HLRRYKSIKCLFSSHSDGTGSTAENFNENDEDYVKSSVLEAVEVKSGPDGFMVKMKDGRQ 118
Query: 121 LRCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAMRNVQIARPTL 180
LRCVHNNPQGG+LP+YAPH AIVLKMEDGTGLLLPIIVLEMPSVLLMAAM NVQIARPT+
Sbjct: 119 LRCVHNNPQGGNLPNYAPHSAIVLKMEDGTGLLLPIIVLEMPSVLLMAAMTNVQIARPTM 178
Query: 181 YQVVKEMIEKMGYEVRLVRVTKRVHEAYFAQLYLTKVGNETECVSFDLRPSDAINIAVRC 240
YQVVK+M++KMGYEVRLVRVT RVHEAYFA+LYL+KVG++++CVSFDLRPSDAINIAVRC
Sbjct: 179 YQVVKDMVDKMGYEVRLVRVTTRVHEAYFAELYLSKVGDKSDCVSFDLRPSDAINIAVRC 238
Query: 241 KVPIQVNKYLAYSDGMRVIESGKLSTHSPGSDGLLFTELD 280
KVPIQVNKYLAYSDGMRVI+SGKLS +P SDGLLFTELD
Sbjct: 239 KVPIQVNKYLAYSDGMRVIDSGKLSKQTPASDGLLFTELD 278
>TAIR|locus:2156842 [details] [associations]
symbol:AT5G66050 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004518 "nuclease
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR001943 InterPro:IPR003729 Pfam:PF02151 Pfam:PF02577
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF103256 KO:K08999
EMBL:BT006066 EMBL:AK118771 IPI:IPI00525695 RefSeq:NP_201406.2
UniGene:At.28884 ProteinModelPortal:Q8GWL4 SMR:Q8GWL4 PaxDb:Q8GWL4
PRIDE:Q8GWL4 EnsemblPlants:AT5G66050.1 GeneID:836735
KEGG:ath:AT5G66050 TAIR:At5g66050 eggNOG:NOG292889
HOGENOM:HOG000131624 InParanoid:Q8GWL4 OMA:VGEFAIE PhylomeDB:Q8GWL4
ProtClustDB:CLSN2680621 ArrayExpress:Q8GWL4 Genevestigator:Q8GWL4
Uniprot:Q8GWL4
Length = 340
Score = 205 (77.2 bits), Expect = 6.5e-15, P = 6.5e-15
Identities = 57/171 (33%), Positives = 89/171 (52%)
Query: 128 PQG-GHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMP-SVLLMAAMRNVQIARPTLYQVVK 185
P G G L + P I LK+ LLP+IV + LL ++ P +Q V
Sbjct: 132 PIGLGFLRQFK-QPTIFLKISCDGDYLLPVIVGDAAVEKLLDVPLQGHTEECPDQFQFVS 190
Query: 186 EMIEKMGYEVRLVRVTKRVHEAYFAQLYLTKVGNETECVSFDLRPSDAINIAVRCKVPIQ 245
+++K+GYEV++V++T R+ Y+A L L K G + E + D RPSDAIN+A C+ PI
Sbjct: 191 AVVDKLGYEVKMVKLTGRIVNTYYASLCLGKPG-DIEAICIDSRPSDAINVARACQAPIY 249
Query: 246 VNKYLAYSDGMRVIESGKLSTHSPGSDGLLFTELDN----ERERSLIRSNM 292
VNK + + +++ G+ + P + +L + D E L+R NM
Sbjct: 250 VNKAIVLEEAIKIGYGGRPQSAKPVFNVILDSAPDGPDPLSEELKLVR-NM 299
>UNIPROTKB|Q50604 [details] [associations]
symbol:MT1877 "Uncharacterized protein Rv1829/MT1877"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR003729 Pfam:PF02577 PROSITE:PS51658 GO:GO:0005886
GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842577 eggNOG:COG1259
SUPFAM:SSF103256 PIR:F70721 RefSeq:NP_216345.1 RefSeq:NP_336336.1
RefSeq:YP_006515229.1 ProteinModelPortal:Q50604 SMR:Q50604
PRIDE:Q50604 EnsemblBacteria:EBMYCT00000001729
EnsemblBacteria:EBMYCT00000069610 GeneID:13316620 GeneID:885743
GeneID:923747 KEGG:mtc:MT1877 KEGG:mtu:Rv1829 KEGG:mtv:RVBD_1829
PATRIC:18125897 TubercuList:Rv1829 HOGENOM:HOG000227641 KO:K08999
OMA:RVEMPSN ProtClustDB:CLSK871968 Uniprot:Q50604
Length = 164
Score = 112 (44.5 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 32/134 (23%), Positives = 67/134 (50%)
Query: 140 PAIVLKMEDGTGLLLPIIVLEMPSVLLMAAMRNVQIARPTLYQVVKEMIEKMGYEVRLVR 199
P ++L+ +G L PI + + + + + V+ RP + +++++I +G+ ++ VR
Sbjct: 18 PVLLLREANGDRYL-PIWIGQSEAAAIALEQQGVEPPRPLTHDLIRDLIAALGHSLKEVR 76
Query: 200 VTKRVHEAYFAQLYLTKVGNETECVSFDLRPSDAINIAVRCKVPIQVNKYLAYSDGMRVI 259
+ ++A L + N + RPSD++ IA+R VPI V + + G+ +
Sbjct: 77 IVDLQEGTFYADLIFDR--N----IKVSARPSDSVAIALRVGVPIYVEEAVLAQAGLLIP 130
Query: 260 -ESGKLSTHSPGSD 272
ES + +T + D
Sbjct: 131 DESDEEATTAVRED 144
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.136 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 313 303 0.00097 115 3 11 22 0.50 33
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 4
No. of states in DFA: 604 (64 KB)
Total size of DFA: 192 KB (2109 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.32u 0.11s 23.43t Elapsed: 00:00:01
Total cpu time: 23.32u 0.11s 23.43t Elapsed: 00:00:01
Start: Mon May 20 19:37:06 2013 End: Mon May 20 19:37:07 2013