Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>021396
MQTLQRIVSKKSMTKTIRCYPMTPSILIRALSTKPPEDGGEEWNDAWETAWLPEDLTPKN
RAPWEEDVNFGSEEIVLSSDVDAETKAFVEDMNDNWDERRKNNNNNEGKHHVNSSVGLGA
EGSGDKLYSLESIKKDYRLKKQRIHAALWLKEIEKQEEAKLDTHGPHHHHHDIDRLLDTC
SEIFDSTNDDLDNAKIPSSSEFKNKPDGWETTAKEQDGNVWEMSQREEDILLQEFDRRIA
YCKFQIASFIKTHIFSRRRPIDGWKYMIEEIGPNARKGKGSVSRLPGLSDPSTQPFKEDR
TPIRGSLTPSRGR

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  021396
        (313 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2056720 - symbol:AT2G02880 "AT2G02880" species...   955  4.7e-96   1


>TAIR|locus:2056720 [details] [associations]
            symbol:AT2G02880 "AT2G02880" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0009560 "embryo sac egg cell differentiation"
            evidence=RCA] EMBL:AC004138 EMBL:CP002685 GenomeReviews:CT485783_GR
            EMBL:BT006040 EMBL:AK118099 IPI:IPI00545729 PIR:A84442
            RefSeq:NP_178391.1 UniGene:At.21054 PaxDb:O80607 PRIDE:O80607
            EnsemblPlants:AT2G02880.1 GeneID:814819 KEGG:ath:AT2G02880
            TAIR:At2g02880 eggNOG:NOG278249 HOGENOM:HOG000240088
            InParanoid:O80607 OMA:WNDAWET PhylomeDB:O80607
            ProtClustDB:CLSN2683707 ArrayExpress:O80607 Genevestigator:O80607
            Uniprot:O80607
        Length = 314

 Score = 955 (341.2 bits), Expect = 4.7e-96, P = 4.7e-96
 Identities = 190/309 (61%), Positives = 220/309 (71%)

Query:     1 MQTLQRIVSKKSMTKTIRCYPMT----PSILIRALSTKPPEDGGEEWNDAWETAWLPEDL 56
             M +L R+V   S T T      T    PSIL+  +STK   D  ++WNDAWE+AWLP+DL
Sbjct:     1 MNSLHRVVGLISRTTTTSPISHTRFNLPSILVNLMSTKSGNDE-DKWNDAWESAWLPDDL 59

Query:    57 TPKNRAPWEEDVNFGSEEIVLSS--DVDAETKAFVEDMXXXXXXXXXXXXXXXXXXXXXS 114
             T K RAPWE DVNF  +E   ++  ++D E KAFVEDM                      
Sbjct:    60 TDKIRAPWERDVNFPVKESTATAIEEIDVEAKAFVEDMNEHWDERRGKSGKVEKREEKKK 119

Query:   115 SVGLGAEGSGDKLYSLESIKKDYRLKKQRIHAALWLKEIEKQEEAKLDTHGPXXXXXDID 174
              +G G + S   LYSLE++KKDYRLKKQR+HA+LW+KEIEK EEAKLD  G      DID
Sbjct:   120 EIGDGEDESSSSLYSLETMKKDYRLKKQRVHASLWVKEIEKLEEAKLDDSGSGGGADDID 179

Query:   175 RLLDTCSEIFDSTNDDLDNAKIPSSSEFKNKPDGWETTAKEQDGNVWEMSQREEDILLQE 234
             RLLD+CSEIFDS + D D  ++ S SE KNKPDGWE+TAKEQDGN+WEMSQREEDILLQE
Sbjct:   180 RLLDSCSEIFDSVDHDFDKLEVSSGSELKNKPDGWESTAKEQDGNLWEMSQREEDILLQE 239

Query:   235 FDRRIAYCKFQIASFIKTHIFSRRRPIDGWKYMIEEIGPNARKGKGSVSRLPGLSDPSTQ 294
             FDRR A+CKFQIASFIK HIFSRRRPIDGWKYMIE IGPNARKGKGSVSRLP LSD STQ
Sbjct:   240 FDRRTAFCKFQIASFIKQHIFSRRRPIDGWKYMIEVIGPNARKGKGSVSRLPALSDVSTQ 299

Query:   295 PFKEDRTPI 303
             PFKE+ + +
Sbjct:   300 PFKEETSSL 308


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.313   0.132   0.393    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      313       287   0.00087  115 3  11 23  0.45    34
                                                     33  0.43    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  622 (66 KB)
  Total size of DFA:  230 KB (2123 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  25.52u 0.08s 25.60t   Elapsed:  00:00:03
  Total cpu time:  25.52u 0.08s 25.60t   Elapsed:  00:00:03
  Start:  Thu May  9 16:01:08 2013   End:  Thu May  9 16:01:11 2013

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