BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021396
(313 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2KN99|CYTSA_RAT Cytospin-A OS=Rattus norvegicus GN=Specc1l PE=2 SV=1
Length = 1118
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Query: 162 DTHGPHHHHHDIDRLLDTCSEIFD---STNDDLDNAKIPSSSEFKNKPDGWETTAKEQDG 218
+T H H + +D L CSE++ S++D LD PSSSE + P E + K G
Sbjct: 332 NTLMAHQHSNSMDNLDSECSEVYQPLTSSDDALD---APSSSESEGVP-SIERSRKGSSG 387
Query: 219 NVWEMS 224
N E+S
Sbjct: 388 NASEVS 393
>sp|Q2KN98|CYTSA_MOUSE Cytospin-A OS=Mus musculus GN=Specc1l PE=1 SV=1
Length = 1118
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 167 HHHHHDIDRLLDTCSEIFD---STNDDLDNAKIPSSSEFKNKPDGWETTAKEQDGNVWEM 223
H H + +D L CSE++ S++D LD PSSSE + P E + K GN E+
Sbjct: 337 HQHSNSMDNLDSECSEVYQPLTSSDDALD---APSSSESEGVP-SIERSRKGSSGNASEV 392
Query: 224 S 224
S
Sbjct: 393 S 393
>sp|Q2KNA1|CYTSA_PANTR Cytospin-A OS=Pan troglodytes GN=SPECC1L PE=2 SV=1
Length = 1117
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 167 HHHHHDIDRLLDTCSEIFD---STNDDLDNAKIPSSSEFKNKPDGWETTAKEQDGNVWEM 223
H H + +D L CSE++ S++D LD PSSSE + P E + K GN E+
Sbjct: 336 HQHSNSMDNLDSECSEVYQPLTSSDDALD---APSSSESEGIP-SIERSRKGSSGNASEV 391
Query: 224 S 224
S
Sbjct: 392 S 392
>sp|Q69YQ0|CYTSA_HUMAN Cytospin-A OS=Homo sapiens GN=SPECC1L PE=1 SV=2
Length = 1117
Score = 33.1 bits (74), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 167 HHHHHDIDRLLDTCSEIFD---STNDDLDNAKIPSSSEFKNKPDGWETTAKEQDGNVWEM 223
H H + +D L CSE++ S++D LD PSSSE + P E + K GN E+
Sbjct: 336 HQHSNSMDNLDSECSEVYQPLTSSDDALD---APSSSESEGIP-SIERSRKGSSGNASEV 391
Query: 224 S 224
S
Sbjct: 392 S 392
>sp|Q2KNA0|CYTSA_CANFA Cytospin-A OS=Canis familiaris GN=SPECC1L PE=2 SV=1
Length = 1117
Score = 33.1 bits (74), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 167 HHHHHDIDRLLDTCSEIFD---STNDDLDNAKIPSSSEFKNKPDGWETTAKEQDGNVWEM 223
H H + +D L CSE++ S++D LD PSSSE + P E + K GN E+
Sbjct: 336 HQHSNSMDNLDSECSEVYQPLTSSDDALD---APSSSESEGIP-SIERSRKGSSGNASEV 391
Query: 224 S 224
S
Sbjct: 392 S 392
>sp|Q9PET6|MQO_XYLFA Probable malate:quinone oxidoreductase OS=Xylella fastidiosa
(strain 9a5c) GN=mqo PE=3 SV=1
Length = 562
Score = 33.1 bits (74), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 16/89 (17%)
Query: 63 PWEEDVNFG------------SEEIVLSSDVDAETKAFVEDMNDNWDERRKNNNNNEGKH 110
P DVNFG S+ L +D E A ++ + W+ KN NN + +
Sbjct: 210 PLGTDVNFGVITRDLAKHLQYSQNFAL--HLDHEVTALRQNPDKTWNVTVKNLNNGQERS 267
Query: 111 HVNSSVGLGAEGSGDKLYSLESI--KKDY 137
+ V +GA G+ KL L I KDY
Sbjct: 268 IKSRFVFIGAGGAALKLLQLSGIPESKDY 296
>sp|A8XQD5|DKF2_CAEBR Serine/threonine-protein kinase dkf-2 OS=Caenorhabditis briggsae
GN=dkf-2 PE=3 SV=2
Length = 1191
Score = 32.7 bits (73), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 170 HHDIDRLLDTCSEIFDSTNDDLDNAKIPSSSE-FKNKPDGWETTAKEQDGNVWEMSQREE 228
+H IDRL + S F DD +SSE F G +E++G + E +EE
Sbjct: 21 NHRIDRLSSSSSSTF--RRDDFRRHSTTTSSEKFSTISIGESVKLEEENGEIPEKFVQEE 78
Query: 229 DILLQEFDRRIAYCKFQIASFIKTHIFS 256
D +++ + R++ C F + +F H+ S
Sbjct: 79 DTVVKTEETRVSDCDFSL-TFYTAHVTS 105
>sp|Q52QH4|NAC68_ORYSJ NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica
GN=NAC68 PE=2 SV=1
Length = 318
Score = 31.6 bits (70), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Query: 152 EIEKQEEAKLDTHGPHHHHHDIDRLL-----DTCSEIFDSTNDDLDNA 194
++E+Q+ A + P +HHH ++ DT S+ F + + D+DNA
Sbjct: 183 KLEQQDVASVAAAAPRNHHHQNGEVMDAAAADTMSDSFQTHDSDIDNA 230
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.131 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 129,770,425
Number of Sequences: 539616
Number of extensions: 5908190
Number of successful extensions: 34388
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 76
Number of HSP's that attempted gapping in prelim test: 33019
Number of HSP's gapped (non-prelim): 1414
length of query: 313
length of database: 191,569,459
effective HSP length: 117
effective length of query: 196
effective length of database: 128,434,387
effective search space: 25173139852
effective search space used: 25173139852
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)