Query 021397
Match_columns 313
No_of_seqs 394 out of 3051
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 03:33:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021397.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021397hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ixk_A Methyltransferase; open 100.0 1.2E-42 4E-47 323.6 21.0 274 6-304 8-297 (315)
2 2frx_A Hypothetical protein YE 100.0 3.8E-41 1.3E-45 329.4 19.2 239 8-266 2-263 (479)
3 3m6w_A RRNA methylase; rRNA me 100.0 9.6E-41 3.3E-45 324.3 20.2 234 13-267 1-247 (464)
4 3m4x_A NOL1/NOP2/SUN family pr 100.0 4.3E-41 1.5E-45 326.3 14.7 231 12-267 6-252 (456)
5 2yxl_A PH0851 protein, 450AA l 100.0 1.1E-39 3.7E-44 317.4 20.8 239 7-266 150-406 (450)
6 1sqg_A SUN protein, FMU protei 100.0 7.4E-39 2.5E-43 309.7 23.0 236 8-266 140-391 (429)
7 2b9e_A NOL1/NOP2/SUN domain fa 100.0 1.8E-38 6.3E-43 294.4 20.9 214 35-267 7-252 (309)
8 4fzv_A Putative methyltransfer 100.0 1.3E-36 4.4E-41 286.5 17.7 171 78-267 111-302 (359)
9 3ajd_A Putative methyltransfer 100.0 4.3E-34 1.5E-38 260.6 16.2 207 35-266 6-228 (274)
10 4dmg_A Putative uncharacterize 99.6 1.8E-15 6.1E-20 144.3 11.1 138 83-258 189-335 (393)
11 3id6_C Fibrillarin-like rRNA/T 99.6 4E-14 1.4E-18 125.6 14.4 77 95-174 58-137 (232)
12 1i1n_A Protein-L-isoaspartate 99.5 3.3E-13 1.1E-17 118.0 16.5 120 46-173 7-144 (226)
13 2as0_A Hypothetical protein PH 99.5 1.1E-13 3.8E-18 131.9 12.1 138 85-256 194-342 (396)
14 1wxx_A TT1595, hypothetical pr 99.5 7.6E-14 2.6E-18 132.5 10.9 136 83-257 186-333 (382)
15 3v97_A Ribosomal RNA large sub 99.5 1.7E-13 5.9E-18 139.5 12.8 142 84-259 516-667 (703)
16 3c0k_A UPF0064 protein YCCW; P 99.5 6.5E-14 2.2E-18 133.5 9.0 86 82-172 195-281 (396)
17 4gek_A TRNA (CMO5U34)-methyltr 99.4 4.9E-13 1.7E-17 120.6 11.6 94 95-194 57-151 (261)
18 2b78_A Hypothetical protein SM 99.4 5.5E-13 1.9E-17 126.8 10.2 134 83-250 187-333 (385)
19 3u81_A Catechol O-methyltransf 99.4 7.5E-13 2.6E-17 115.7 9.7 82 92-173 40-121 (221)
20 3njr_A Precorrin-6Y methylase; 99.4 5.4E-12 1.8E-16 109.3 14.7 76 95-173 40-115 (204)
21 1nkv_A Hypothetical protein YJ 99.4 4.4E-12 1.5E-16 112.5 14.3 94 99-197 25-118 (256)
22 3lpm_A Putative methyltransfer 99.4 2.9E-12 1E-16 114.8 12.8 84 89-174 20-111 (259)
23 3e05_A Precorrin-6Y C5,15-meth 99.4 1.3E-11 4.5E-16 106.1 14.4 81 90-173 21-101 (204)
24 3duw_A OMT, O-methyltransferas 99.3 3.4E-12 1.2E-16 111.2 10.1 80 94-173 42-121 (223)
25 4df3_A Fibrillarin-like rRNA/T 99.3 3.7E-12 1.3E-16 112.8 10.0 67 106-175 73-139 (233)
26 3hem_A Cyclopropane-fatty-acyl 99.3 1.5E-11 5.3E-16 112.3 13.8 123 101-250 63-185 (302)
27 1xxl_A YCGJ protein; structura 99.3 1.1E-11 3.7E-16 109.5 12.3 97 94-196 5-101 (239)
28 3tfw_A Putative O-methyltransf 99.3 2.1E-12 7.2E-17 115.2 7.7 80 94-173 47-126 (248)
29 3eey_A Putative rRNA methylase 99.3 9.7E-12 3.3E-16 106.2 11.5 69 107-175 19-87 (197)
30 3mti_A RRNA methylase; SAM-dep 99.3 5.7E-12 2E-16 106.5 9.8 64 107-174 19-82 (185)
31 1vl5_A Unknown conserved prote 99.3 9.7E-12 3.3E-16 110.9 11.7 108 84-197 11-118 (260)
32 1yb2_A Hypothetical protein TA 99.3 1.1E-11 3.8E-16 112.1 12.0 92 81-173 81-173 (275)
33 2igt_A SAM dependent methyltra 99.3 8.5E-12 2.9E-16 116.3 11.5 95 83-180 125-232 (332)
34 3vc1_A Geranyl diphosphate 2-C 99.3 2.4E-11 8.2E-16 111.7 13.9 95 96-194 102-197 (312)
35 3hm2_A Precorrin-6Y C5,15-meth 99.3 1.5E-11 5.2E-16 102.8 11.5 81 89-172 5-85 (178)
36 3f4k_A Putative methyltransfer 99.3 2.1E-11 7.1E-16 108.2 13.0 113 107-253 43-155 (257)
37 3c3y_A Pfomt, O-methyltransfer 99.3 5.8E-12 2E-16 111.6 9.4 82 92-173 52-133 (237)
38 3tma_A Methyltransferase; thum 99.3 2.1E-11 7.1E-16 114.3 13.5 79 95-174 188-266 (354)
39 2gpy_A O-methyltransferase; st 99.3 4.4E-12 1.5E-16 111.5 8.4 86 88-174 32-117 (233)
40 3dh0_A SAM dependent methyltra 99.3 2.4E-11 8.1E-16 105.3 12.9 119 100-250 27-145 (219)
41 3r3h_A O-methyltransferase, SA 99.3 8E-13 2.7E-17 117.7 3.6 83 91-173 41-123 (242)
42 3fpf_A Mtnas, putative unchara 99.3 9.8E-12 3.4E-16 113.7 10.5 70 104-175 116-185 (298)
43 3tr6_A O-methyltransferase; ce 99.3 4.8E-12 1.6E-16 110.4 8.2 82 92-173 46-127 (225)
44 3kkz_A Uncharacterized protein 99.3 2.9E-11 9.9E-16 108.3 13.4 115 102-250 37-152 (267)
45 3bus_A REBM, methyltransferase 99.3 3.7E-11 1.3E-15 107.6 14.0 119 99-250 50-168 (273)
46 3lbf_A Protein-L-isoaspartate 99.3 4.2E-11 1.4E-15 103.2 13.8 101 88-194 55-155 (210)
47 2frn_A Hypothetical protein PH 99.3 1.1E-11 3.7E-16 112.6 10.2 75 97-175 114-188 (278)
48 3dr5_A Putative O-methyltransf 99.3 3.7E-12 1.3E-16 111.9 6.9 79 95-173 38-120 (221)
49 2o57_A Putative sarcosine dime 99.3 6.2E-11 2.1E-15 107.7 13.9 98 96-197 64-165 (297)
50 1sui_A Caffeoyl-COA O-methyltr 99.2 1.6E-11 5.5E-16 109.6 9.1 83 91-173 60-142 (247)
51 3mb5_A SAM-dependent methyltra 99.2 3.5E-11 1.2E-15 107.0 11.2 85 89-173 72-156 (255)
52 3dlc_A Putative S-adenosyl-L-m 99.2 6.1E-11 2.1E-15 102.0 12.0 93 99-196 33-125 (219)
53 2b3t_A Protein methyltransfera 99.2 5E-11 1.7E-15 107.7 11.8 90 89-180 86-183 (276)
54 1kpg_A CFA synthase;, cyclopro 99.2 9.3E-11 3.2E-15 106.0 13.5 89 101-196 55-143 (287)
55 3ntv_A MW1564 protein; rossman 99.2 2.6E-11 9E-16 106.8 8.6 84 90-174 51-134 (232)
56 2fk8_A Methoxy mycolic acid sy 99.2 1.2E-10 4E-15 107.1 13.1 117 100-250 80-196 (318)
57 1dl5_A Protein-L-isoaspartate 99.2 1.8E-10 6.3E-15 106.3 14.4 97 94-193 59-155 (317)
58 3gdh_A Trimethylguanosine synt 99.2 2.7E-12 9.1E-17 113.3 1.6 88 90-180 56-151 (241)
59 3gu3_A Methyltransferase; alph 99.2 6E-11 2.1E-15 107.5 10.4 97 96-197 8-104 (284)
60 3axs_A Probable N(2),N(2)-dime 99.2 1.5E-11 5.1E-16 116.9 6.1 84 88-171 24-114 (392)
61 3bkx_A SAM-dependent methyltra 99.2 1.3E-10 4.5E-15 104.1 12.1 103 95-197 28-137 (275)
62 2yxe_A Protein-L-isoaspartate 99.2 3.7E-10 1.3E-14 97.6 14.1 84 88-172 55-138 (215)
63 2dul_A N(2),N(2)-dimethylguano 99.2 2.8E-11 9.5E-16 114.7 7.2 91 89-181 24-139 (378)
64 3cbg_A O-methyltransferase; cy 99.2 4.4E-11 1.5E-15 105.5 8.0 79 94-172 56-134 (232)
65 2xvm_A Tellurite resistance pr 99.2 2.7E-10 9.3E-15 96.7 12.7 88 101-195 23-110 (199)
66 2avd_A Catechol-O-methyltransf 99.2 5.4E-11 1.8E-15 103.9 8.5 78 95-172 54-131 (229)
67 3p9n_A Possible methyltransfer 99.2 1E-10 3.5E-15 99.4 9.9 63 109-174 43-105 (189)
68 3evz_A Methyltransferase; NYSG 99.2 3.5E-10 1.2E-14 98.8 13.6 63 106-172 51-114 (230)
69 3c3p_A Methyltransferase; NP_9 99.2 2.1E-11 7.2E-16 105.4 5.6 80 94-173 40-119 (210)
70 1nt2_A Fibrillarin-like PRE-rR 99.2 2E-10 6.9E-15 99.9 11.8 65 106-174 53-117 (210)
71 3k6r_A Putative transferase PH 99.2 9.1E-11 3.1E-15 106.6 9.8 72 100-175 117-188 (278)
72 1dus_A MJ0882; hypothetical pr 99.2 3.4E-10 1.2E-14 95.3 12.6 74 97-173 39-113 (194)
73 1nv8_A HEMK protein; class I a 99.2 2.8E-10 9.7E-15 103.6 12.9 89 90-180 100-199 (284)
74 3ofk_A Nodulation protein S; N 99.2 1E-10 3.4E-15 101.1 9.5 94 95-197 36-129 (216)
75 3jwh_A HEN1; methyltransferase 99.2 2E-10 6.9E-15 99.5 11.3 93 101-196 20-116 (217)
76 1pjz_A Thiopurine S-methyltran 99.2 1.1E-10 3.6E-15 100.9 9.3 84 105-194 17-113 (203)
77 4dzr_A Protein-(glutamine-N5) 99.1 2E-11 6.7E-16 104.8 4.6 70 109-181 29-109 (215)
78 2fca_A TRNA (guanine-N(7)-)-me 99.1 1.4E-10 4.8E-15 100.9 10.0 65 109-175 37-101 (213)
79 2ift_A Putative methylase HI07 99.1 8.4E-11 2.9E-15 101.4 8.5 63 110-174 53-116 (201)
80 3ocj_A Putative exported prote 99.1 7.3E-11 2.5E-15 108.1 8.5 115 107-250 115-229 (305)
81 3orh_A Guanidinoacetate N-meth 99.1 4.1E-11 1.4E-15 106.1 6.3 61 108-172 58-118 (236)
82 1yzh_A TRNA (guanine-N(7)-)-me 99.1 5.6E-10 1.9E-14 96.7 13.4 65 109-175 40-104 (214)
83 2ozv_A Hypothetical protein AT 99.1 8.4E-11 2.9E-15 105.6 8.3 77 97-174 23-102 (260)
84 3g89_A Ribosomal RNA small sub 99.1 1.5E-10 5.1E-15 103.5 9.8 66 108-175 78-143 (249)
85 1xdz_A Methyltransferase GIDB; 99.1 1.5E-10 5.3E-15 102.2 9.8 67 107-175 67-133 (240)
86 3g5t_A Trans-aconitate 3-methy 99.1 4.1E-10 1.4E-14 102.6 12.8 87 108-194 34-125 (299)
87 3a27_A TYW2, uncharacterized p 99.1 3E-10 1E-14 102.8 11.7 82 91-174 100-181 (272)
88 3dxy_A TRNA (guanine-N(7)-)-me 99.1 1.1E-10 3.8E-15 102.2 8.4 63 109-173 33-95 (218)
89 3jwg_A HEN1, methyltransferase 99.1 2.8E-10 9.7E-15 98.6 10.7 94 100-196 19-116 (219)
90 1o54_A SAM-dependent O-methylt 99.1 4.8E-10 1.6E-14 101.2 12.6 76 99-174 101-176 (277)
91 2hnk_A SAM-dependent O-methylt 99.1 1.6E-10 5.6E-15 101.9 9.1 80 94-173 44-123 (239)
92 3dtn_A Putative methyltransfer 99.1 3.9E-10 1.3E-14 98.6 11.4 116 101-250 34-150 (234)
93 2qm3_A Predicted methyltransfe 99.1 8.1E-10 2.8E-14 104.3 14.3 87 84-173 145-232 (373)
94 1jg1_A PIMT;, protein-L-isoasp 99.1 6.3E-10 2.1E-14 97.9 12.6 82 87-171 68-149 (235)
95 2p35_A Trans-aconitate 2-methy 99.1 4.6E-10 1.6E-14 99.4 11.8 93 94-196 17-109 (259)
96 3mgg_A Methyltransferase; NYSG 99.1 6.5E-10 2.2E-14 99.7 12.9 94 100-197 27-120 (276)
97 2esr_A Methyltransferase; stru 99.1 3.7E-10 1.3E-14 94.6 10.5 70 102-173 22-92 (177)
98 3ujc_A Phosphoethanolamine N-m 99.1 2.8E-10 9.5E-15 101.0 9.8 89 100-195 45-133 (266)
99 1vbf_A 231AA long hypothetical 99.1 8.8E-10 3E-14 96.2 12.8 99 87-193 47-145 (231)
100 1i9g_A Hypothetical protein RV 99.1 9.6E-10 3.3E-14 98.9 13.4 82 94-175 83-166 (280)
101 2vdv_E TRNA (guanine-N(7)-)-me 99.1 4.8E-10 1.6E-14 99.5 11.1 64 108-173 47-118 (246)
102 2yxd_A Probable cobalt-precorr 99.1 9.8E-10 3.4E-14 91.7 12.1 77 93-173 18-94 (183)
103 4fsd_A Arsenic methyltransfera 99.1 5.4E-10 1.8E-14 105.8 11.6 90 108-197 81-181 (383)
104 4htf_A S-adenosylmethionine-de 99.1 5.9E-10 2E-14 100.6 11.0 108 110-250 68-175 (285)
105 3ou2_A SAM-dependent methyltra 99.1 1.4E-09 4.7E-14 93.6 12.8 112 101-250 37-148 (218)
106 1l3i_A Precorrin-6Y methyltran 99.1 4.5E-10 1.5E-14 94.4 9.3 77 94-173 17-93 (192)
107 3p2e_A 16S rRNA methylase; met 99.1 7.1E-11 2.4E-15 103.9 4.3 67 108-176 22-92 (225)
108 2yx1_A Hypothetical protein MJ 99.1 3.6E-10 1.2E-14 105.3 9.2 62 109-174 194-255 (336)
109 3grz_A L11 mtase, ribosomal pr 99.1 8.7E-10 3E-14 94.6 10.9 76 97-175 45-122 (205)
110 3m70_A Tellurite resistance pr 99.1 8.6E-10 2.9E-14 99.6 11.2 83 104-194 114-196 (286)
111 3tm4_A TRNA (guanine N2-)-meth 99.0 4.3E-10 1.5E-14 106.3 9.5 89 85-175 187-281 (373)
112 2ipx_A RRNA 2'-O-methyltransfe 99.0 2E-09 6.9E-14 94.4 13.1 67 105-174 72-138 (233)
113 3bt7_A TRNA (uracil-5-)-methyl 99.0 4.1E-10 1.4E-14 106.2 9.2 67 102-173 206-272 (369)
114 2pbf_A Protein-L-isoaspartate 99.0 1.7E-09 5.9E-14 94.2 12.6 74 100-173 68-151 (227)
115 2fhp_A Methylase, putative; al 99.0 8.2E-10 2.8E-14 92.8 10.0 70 102-173 35-105 (187)
116 2pwy_A TRNA (adenine-N(1)-)-me 99.0 2.3E-09 7.9E-14 94.9 13.4 80 94-174 80-160 (258)
117 1r18_A Protein-L-isoaspartate( 99.0 1.2E-09 3.9E-14 95.6 11.0 82 91-173 63-156 (227)
118 3sm3_A SAM-dependent methyltra 99.0 1.1E-09 3.9E-14 95.1 10.8 112 108-250 28-143 (235)
119 4dcm_A Ribosomal RNA large sub 99.0 1.8E-09 6.2E-14 102.1 13.0 78 95-173 207-286 (375)
120 3kr9_A SAM-dependent methyltra 99.0 1.8E-09 6.3E-14 95.0 11.9 64 108-172 13-76 (225)
121 1ri5_A MRNA capping enzyme; me 99.0 1.2E-09 4.1E-14 98.6 11.1 83 108-193 62-144 (298)
122 2fpo_A Methylase YHHF; structu 99.0 7.4E-10 2.5E-14 95.5 9.1 61 110-173 54-114 (202)
123 2b25_A Hypothetical protein; s 99.0 1.8E-09 6.3E-14 100.1 12.3 81 94-174 89-179 (336)
124 3g5l_A Putative S-adenosylmeth 99.0 1.3E-09 4.4E-14 96.5 10.6 88 102-197 36-123 (253)
125 3ccf_A Cyclopropane-fatty-acyl 99.0 1.4E-09 4.6E-14 98.0 10.7 84 101-196 48-131 (279)
126 3g2m_A PCZA361.24; SAM-depende 99.0 8.3E-10 2.8E-14 100.5 9.2 83 100-189 73-157 (299)
127 3g07_A 7SK snRNA methylphospha 99.0 8.2E-10 2.8E-14 100.7 9.0 49 110-159 46-94 (292)
128 3dou_A Ribosomal RNA large sub 99.0 8.3E-10 2.8E-14 94.6 8.5 53 108-175 23-75 (191)
129 2yqz_A Hypothetical protein TT 99.0 2.3E-09 7.8E-14 95.0 11.6 83 107-196 36-118 (263)
130 2p8j_A S-adenosylmethionine-de 99.0 1.4E-09 4.6E-14 93.2 9.6 111 107-250 20-130 (209)
131 3lec_A NADB-rossmann superfami 99.0 3.1E-09 1.1E-13 93.8 12.0 65 108-173 19-83 (230)
132 3hnr_A Probable methyltransfer 99.0 1.6E-09 5.5E-14 93.7 9.6 109 104-250 39-147 (220)
133 3iv6_A Putative Zn-dependent a 99.0 1.3E-09 4.4E-14 98.2 9.1 57 99-158 34-90 (261)
134 1g8a_A Fibrillarin-like PRE-rR 99.0 2.9E-09 9.8E-14 92.9 11.1 65 107-174 70-134 (227)
135 1xtp_A LMAJ004091AAA; SGPP, st 99.0 3.2E-09 1.1E-13 93.7 11.2 87 102-195 85-171 (254)
136 3uwp_A Histone-lysine N-methyl 99.0 2.4E-09 8.3E-14 101.8 10.9 75 101-176 164-246 (438)
137 2vdw_A Vaccinia virus capping 99.0 2E-09 6.8E-14 98.9 9.8 113 110-250 48-171 (302)
138 3gnl_A Uncharacterized protein 99.0 7.1E-09 2.4E-13 92.2 12.8 65 108-173 19-83 (244)
139 3bkw_A MLL3908 protein, S-aden 98.9 2.8E-09 9.4E-14 93.4 10.0 88 101-196 34-121 (243)
140 1ve3_A Hypothetical protein PH 98.9 3.7E-09 1.2E-13 91.6 10.7 76 109-191 37-112 (227)
141 1wzn_A SAM-dependent methyltra 98.9 6.6E-09 2.3E-13 91.7 12.5 65 106-175 37-101 (252)
142 2pjd_A Ribosomal RNA small sub 98.9 2.3E-09 7.7E-14 100.0 9.8 76 96-174 182-257 (343)
143 3lcc_A Putative methyl chlorid 98.9 1.7E-09 6E-14 94.7 8.5 79 111-195 67-145 (235)
144 1fbn_A MJ fibrillarin homologu 98.9 4.3E-09 1.5E-13 92.3 10.9 64 106-173 70-133 (230)
145 1jsx_A Glucose-inhibited divis 98.9 5.8E-09 2E-13 89.3 11.4 64 110-175 65-128 (207)
146 1m6y_A S-adenosyl-methyltransf 98.9 1.4E-09 4.7E-14 100.0 7.8 70 101-173 17-86 (301)
147 1y8c_A S-adenosylmethionine-de 98.9 4.7E-09 1.6E-13 91.8 10.9 78 110-195 37-115 (246)
148 3dmg_A Probable ribosomal RNA 98.9 6.1E-09 2.1E-13 98.7 12.5 74 96-174 213-292 (381)
149 3htx_A HEN1; HEN1, small RNA m 98.9 5.5E-09 1.9E-13 106.4 12.5 93 102-197 713-811 (950)
150 1zx0_A Guanidinoacetate N-meth 98.9 1E-09 3.5E-14 96.5 6.3 63 108-174 58-120 (236)
151 3ege_A Putative methyltransfer 98.9 2.5E-09 8.4E-14 95.5 8.8 88 98-197 22-109 (261)
152 2fyt_A Protein arginine N-meth 98.9 4E-09 1.4E-13 98.3 10.6 72 102-176 56-127 (340)
153 3e23_A Uncharacterized protein 98.9 3.8E-09 1.3E-13 90.9 9.7 77 107-196 40-116 (211)
154 2ex4_A Adrenal gland protein A 98.9 3.5E-09 1.2E-13 93.2 9.5 82 110-196 79-160 (241)
155 3l8d_A Methyltransferase; stru 98.9 6.8E-09 2.3E-13 90.9 11.3 105 108-250 51-155 (242)
156 2yvl_A TRMI protein, hypotheti 98.9 1.9E-08 6.6E-13 88.4 14.3 76 96-174 77-152 (248)
157 1x19_A CRTF-related protein; m 98.9 1.8E-08 6.3E-13 94.1 14.9 93 97-195 177-269 (359)
158 2gb4_A Thiopurine S-methyltran 98.9 4.2E-09 1.4E-13 94.2 10.0 84 106-194 64-164 (252)
159 2kw5_A SLR1183 protein; struct 98.9 2.3E-09 8E-14 91.5 8.0 62 108-175 28-89 (202)
160 2p7i_A Hypothetical protein; p 98.9 2.2E-09 7.7E-14 93.9 7.9 79 108-197 40-118 (250)
161 2bm8_A Cephalosporin hydroxyla 98.9 1.4E-09 5E-14 96.2 6.6 79 90-174 60-142 (236)
162 3d2l_A SAM-dependent methyltra 98.9 6.1E-09 2.1E-13 91.1 10.6 61 109-175 32-92 (243)
163 3ckk_A TRNA (guanine-N(7)-)-me 98.9 2.5E-09 8.6E-14 94.6 7.9 64 108-173 44-113 (235)
164 3thr_A Glycine N-methyltransfe 98.9 3.3E-09 1.1E-13 95.9 8.4 126 100-250 47-177 (293)
165 1u2z_A Histone-lysine N-methyl 98.9 1.3E-08 4.3E-13 97.9 12.8 70 102-172 234-311 (433)
166 2h1r_A Dimethyladenosine trans 98.9 4.6E-09 1.6E-13 96.3 9.1 81 92-176 24-104 (299)
167 3q7e_A Protein arginine N-meth 98.9 4.7E-09 1.6E-13 98.2 9.3 65 108-175 64-128 (349)
168 2h00_A Methyltransferase 10 do 98.9 6.2E-09 2.1E-13 92.4 9.6 63 110-173 65-127 (254)
169 1zq9_A Probable dimethyladenos 98.9 8.1E-09 2.8E-13 93.9 10.5 86 92-180 10-95 (285)
170 3r0q_C Probable protein argini 98.9 5.2E-09 1.8E-13 98.9 9.3 69 105-176 58-126 (376)
171 2y1w_A Histone-arginine methyl 98.9 9.9E-09 3.4E-13 95.9 11.1 71 102-175 42-112 (348)
172 3mq2_A 16S rRNA methyltransfer 98.9 2.1E-09 7.2E-14 93.1 5.9 71 104-176 21-95 (218)
173 3bgv_A MRNA CAP guanine-N7 met 98.9 1.6E-08 5.6E-13 92.6 12.1 83 109-193 33-125 (313)
174 2r3s_A Uncharacterized protein 98.8 1.2E-08 4E-13 94.1 10.9 89 101-194 154-244 (335)
175 2f8l_A Hypothetical protein LM 98.8 3.8E-09 1.3E-13 98.5 7.6 91 90-182 106-210 (344)
176 3h2b_A SAM-dependent methyltra 98.8 6.3E-09 2.2E-13 88.8 8.4 75 111-196 42-116 (203)
177 3ggd_A SAM-dependent methyltra 98.8 1.2E-08 4.1E-13 89.7 10.3 83 107-196 53-138 (245)
178 3bxo_A N,N-dimethyltransferase 98.8 2.6E-08 9E-13 86.8 12.4 104 109-250 39-143 (239)
179 1ws6_A Methyltransferase; stru 98.8 2.9E-09 9.8E-14 88.0 5.8 59 110-173 41-99 (171)
180 1qzz_A RDMB, aclacinomycin-10- 98.8 1.9E-08 6.7E-13 94.2 12.2 87 101-194 173-260 (374)
181 4hg2_A Methyltransferase type 98.8 5.9E-09 2E-13 93.6 7.9 71 110-192 39-109 (257)
182 3pfg_A N-methyltransferase; N, 98.8 7.9E-09 2.7E-13 92.0 8.7 75 109-195 49-124 (263)
183 1wy7_A Hypothetical protein PH 98.8 8.2E-09 2.8E-13 88.5 8.4 70 107-180 46-119 (207)
184 3i9f_A Putative type 11 methyl 98.8 7.3E-09 2.5E-13 85.9 7.5 104 104-250 11-114 (170)
185 1g6q_1 HnRNP arginine N-methyl 98.8 1.1E-08 3.8E-13 94.8 9.4 67 106-175 34-100 (328)
186 2gs9_A Hypothetical protein TT 98.8 1.5E-08 5.2E-13 86.9 9.7 74 110-196 36-109 (211)
187 2pxx_A Uncharacterized protein 98.8 1.1E-08 3.9E-13 87.4 8.6 121 108-250 40-161 (215)
188 2aot_A HMT, histamine N-methyl 98.8 9.6E-09 3.3E-13 93.3 8.4 89 108-197 50-150 (292)
189 2a14_A Indolethylamine N-methy 98.8 2.7E-09 9.3E-14 95.6 4.5 86 107-194 52-168 (263)
190 3gwz_A MMCR; methyltransferase 98.8 8.8E-08 3E-12 90.0 15.1 116 102-250 194-309 (369)
191 1uwv_A 23S rRNA (uracil-5-)-me 98.8 1.3E-08 4.5E-13 97.9 9.5 68 102-173 278-345 (433)
192 2qe6_A Uncharacterized protein 98.8 2.9E-08 1E-12 89.7 11.1 110 110-250 77-198 (274)
193 3i53_A O-methyltransferase; CO 98.8 4.3E-08 1.5E-12 90.6 12.3 110 107-250 166-276 (332)
194 3ldu_A Putative methylase; str 98.8 5.2E-08 1.8E-12 92.4 13.1 92 83-174 162-296 (385)
195 3dli_A Methyltransferase; PSI- 98.8 7.6E-09 2.6E-13 90.9 6.8 77 108-196 39-115 (240)
196 2plw_A Ribosomal RNA methyltra 98.8 5.2E-08 1.8E-12 82.9 11.8 56 108-175 20-76 (201)
197 1inl_A Spermidine synthase; be 98.8 9.2E-09 3.1E-13 94.1 7.5 63 110-173 90-155 (296)
198 2r6z_A UPF0341 protein in RSP 98.8 3.9E-09 1.3E-13 94.9 4.7 82 99-183 72-171 (258)
199 3ldg_A Putative uncharacterize 98.8 8.3E-08 2.8E-12 91.0 14.1 92 83-174 161-295 (384)
200 3uzu_A Ribosomal RNA small sub 98.8 2.2E-08 7.6E-13 90.9 9.6 75 97-176 29-104 (279)
201 2nyu_A Putative ribosomal RNA 98.8 2.7E-08 9.4E-13 84.2 9.6 55 108-174 20-83 (196)
202 1tw3_A COMT, carminomycin 4-O- 98.8 8.2E-08 2.8E-12 89.5 13.7 86 102-194 175-261 (360)
203 1o9g_A RRNA methyltransferase; 98.8 9.6E-09 3.3E-13 91.1 7.0 51 108-158 49-100 (250)
204 3tqs_A Ribosomal RNA small sub 98.8 1.9E-08 6.3E-13 90.2 8.6 74 97-176 16-89 (255)
205 3bzb_A Uncharacterized protein 98.8 4.7E-08 1.6E-12 88.6 11.2 63 108-172 77-149 (281)
206 3e8s_A Putative SAM dependent 98.7 9.2E-09 3.1E-13 88.7 6.2 81 103-193 45-127 (227)
207 3b3j_A Histone-arginine methyl 98.7 3.8E-08 1.3E-12 96.0 11.0 69 104-175 152-220 (480)
208 2nxc_A L11 mtase, ribosomal pr 98.7 4.1E-08 1.4E-12 87.6 10.4 61 108-173 118-178 (254)
209 3cc8_A Putative methyltransfer 98.7 3.3E-08 1.1E-12 85.4 9.3 83 103-197 26-108 (230)
210 3gru_A Dimethyladenosine trans 98.7 5.2E-08 1.8E-12 89.2 11.0 79 92-176 32-110 (295)
211 2jjq_A Uncharacterized RNA met 98.7 3.1E-08 1.1E-12 95.1 9.7 62 108-174 288-349 (425)
212 1qam_A ERMC' methyltransferase 98.7 2.7E-08 9.3E-13 88.4 8.5 79 92-176 12-90 (244)
213 3mcz_A O-methyltransferase; ad 98.7 6.3E-08 2.2E-12 90.0 11.3 117 104-250 172-289 (352)
214 3q87_B N6 adenine specific DNA 98.7 3.3E-08 1.1E-12 82.7 8.4 64 96-173 7-72 (170)
215 3ll7_A Putative methyltransfer 98.7 2E-08 6.7E-13 95.8 7.7 72 109-184 92-174 (410)
216 2ip2_A Probable phenazine-spec 98.7 3.6E-08 1.2E-12 91.0 9.2 87 101-194 159-245 (334)
217 3k0b_A Predicted N6-adenine-sp 98.7 1.4E-07 5E-12 89.6 13.6 91 84-174 169-302 (393)
218 4hc4_A Protein arginine N-meth 98.7 5.4E-08 1.8E-12 91.9 10.3 65 109-176 82-146 (376)
219 3dp7_A SAM-dependent methyltra 98.7 1.4E-07 4.8E-12 88.5 12.6 81 109-194 178-260 (363)
220 3m33_A Uncharacterized protein 98.6 8.1E-08 2.8E-12 83.7 9.2 59 108-175 46-105 (226)
221 3cgg_A SAM-dependent methyltra 98.6 1.5E-07 5.3E-12 78.8 10.6 71 108-189 44-114 (195)
222 2avn_A Ubiquinone/menaquinone 98.6 1.1E-07 3.7E-12 84.7 9.8 71 110-192 54-124 (260)
223 1ej0_A FTSJ; methyltransferase 98.6 9.4E-08 3.2E-12 78.6 8.5 56 108-175 20-75 (180)
224 2ih2_A Modification methylase 98.6 1.7E-08 5.9E-13 96.0 4.4 84 88-181 17-106 (421)
225 3fut_A Dimethyladenosine trans 98.6 6.1E-08 2.1E-12 87.6 7.8 74 95-176 32-105 (271)
226 2i62_A Nicotinamide N-methyltr 98.6 1.6E-08 5.3E-13 89.7 3.2 85 107-193 53-168 (265)
227 1ne2_A Hypothetical protein TA 98.6 4.8E-08 1.7E-12 83.3 6.2 61 107-175 48-108 (200)
228 2okc_A Type I restriction enzy 98.6 1.2E-07 4E-12 91.6 9.4 96 88-183 149-263 (445)
229 2oyr_A UPF0341 protein YHIQ; a 98.6 4.8E-08 1.6E-12 87.7 5.7 82 99-183 75-174 (258)
230 3ftd_A Dimethyladenosine trans 98.6 7.8E-08 2.7E-12 85.8 6.8 78 92-176 13-90 (249)
231 3giw_A Protein of unknown func 98.6 1.2E-07 4E-12 85.7 7.9 64 111-175 79-144 (277)
232 3fzg_A 16S rRNA methylase; met 98.6 1.1E-07 3.7E-12 81.3 7.2 57 109-166 48-104 (200)
233 3adn_A Spermidine synthase; am 98.6 1.3E-07 4.5E-12 86.4 8.2 65 109-174 82-150 (294)
234 1mjf_A Spermidine synthase; sp 98.6 9.9E-08 3.4E-12 86.5 7.2 62 109-173 74-145 (281)
235 1p91_A Ribosomal RNA large sub 98.5 1.5E-07 5.1E-12 83.9 8.2 60 109-175 84-143 (269)
236 1qyr_A KSGA, high level kasuga 98.5 9E-08 3.1E-12 85.6 6.5 74 97-176 8-81 (252)
237 2p41_A Type II methyltransfera 98.5 1.5E-08 5.3E-13 93.1 1.2 61 108-175 80-145 (305)
238 2g72_A Phenylethanolamine N-me 98.5 1.1E-07 3.6E-12 86.0 6.6 46 109-156 70-115 (289)
239 1af7_A Chemotaxis receptor met 98.5 3.2E-07 1.1E-11 83.0 9.3 112 110-249 105-253 (274)
240 1iy9_A Spermidine synthase; ro 98.5 2.7E-07 9.4E-12 83.4 8.9 63 110-173 75-140 (275)
241 2ar0_A M.ecoki, type I restric 98.5 3.1E-07 1E-11 90.8 9.9 96 88-183 147-271 (541)
242 2oxt_A Nucleoside-2'-O-methylt 98.5 1.4E-08 4.9E-13 91.5 0.3 62 107-175 71-137 (265)
243 1xj5_A Spermidine synthase 1; 98.5 2.1E-07 7.2E-12 86.6 8.1 65 108-173 118-185 (334)
244 4azs_A Methyltransferase WBDD; 98.5 7E-08 2.4E-12 96.0 4.9 84 110-197 66-149 (569)
245 3bwc_A Spermidine synthase; SA 98.5 1.4E-07 4.8E-12 86.5 6.6 66 108-174 93-161 (304)
246 2o07_A Spermidine synthase; st 98.5 1.8E-07 6E-12 85.9 7.2 65 108-173 93-160 (304)
247 3opn_A Putative hemolysin; str 98.5 4.1E-08 1.4E-12 86.7 2.4 43 110-154 37-79 (232)
248 1yub_A Ermam, rRNA methyltrans 98.5 1.3E-08 4.6E-13 90.2 -0.9 79 92-176 11-89 (245)
249 2wa2_A Non-structural protein 98.5 2.6E-08 8.8E-13 90.3 0.9 64 107-175 79-145 (276)
250 3lst_A CALO1 methyltransferase 98.5 3.5E-07 1.2E-11 85.1 8.6 112 102-250 176-288 (348)
251 3hp7_A Hemolysin, putative; st 98.5 1.3E-07 4.4E-12 86.3 5.3 46 105-152 79-125 (291)
252 2pt6_A Spermidine synthase; tr 98.5 2E-07 6.9E-12 86.2 6.7 64 109-173 115-181 (321)
253 1vlm_A SAM-dependent methyltra 98.5 2.5E-07 8.4E-12 80.1 6.8 70 110-196 47-116 (219)
254 2i7c_A Spermidine synthase; tr 98.4 3.9E-07 1.3E-11 82.7 8.0 65 108-173 76-143 (283)
255 2b2c_A Spermidine synthase; be 98.4 2.1E-07 7.4E-12 85.8 6.2 64 109-173 107-173 (314)
256 3cvo_A Methyltransferase-like 98.4 8.9E-07 3.1E-11 76.4 9.2 72 96-173 18-91 (202)
257 3v97_A Ribosomal RNA large sub 98.4 1.4E-06 4.9E-11 88.6 11.9 92 83-174 157-295 (703)
258 2px2_A Genome polyprotein [con 98.4 2.3E-08 7.8E-13 88.7 -1.2 130 108-246 71-231 (269)
259 1uir_A Polyamine aminopropyltr 98.4 7.2E-07 2.5E-11 82.1 8.2 64 109-173 76-143 (314)
260 4a6d_A Hydroxyindole O-methylt 98.4 2.7E-06 9.1E-11 79.5 12.1 115 102-250 171-285 (353)
261 3gcz_A Polyprotein; flavivirus 98.4 2.2E-08 7.6E-13 90.0 -2.2 131 107-242 87-245 (282)
262 4e2x_A TCAB9; kijanose, tetron 98.3 2.3E-07 7.8E-12 88.3 4.1 87 102-197 99-186 (416)
263 3khk_A Type I restriction-modi 98.3 3.3E-07 1.1E-11 90.6 4.6 95 88-183 223-339 (544)
264 2qfm_A Spermine synthase; sper 98.3 1.2E-06 4E-11 82.1 8.1 61 110-172 188-255 (364)
265 3gjy_A Spermidine synthase; AP 98.3 1.3E-06 4.5E-11 80.5 8.1 60 112-173 91-150 (317)
266 2xyq_A Putative 2'-O-methyl tr 98.3 1.3E-06 4.5E-11 79.6 7.0 54 106-175 59-119 (290)
267 3sso_A Methyltransferase; macr 98.2 1.1E-06 3.6E-11 83.4 6.1 57 110-176 216-278 (419)
268 3ufb_A Type I restriction-modi 98.2 7.4E-06 2.5E-10 80.7 12.0 95 88-183 195-312 (530)
269 3evf_A RNA-directed RNA polyme 98.2 1.1E-07 3.8E-12 85.3 -1.1 131 107-244 71-230 (277)
270 2zfu_A Nucleomethylin, cerebra 98.2 1.6E-06 5.5E-11 74.4 6.1 68 101-192 58-125 (215)
271 3reo_A (ISO)eugenol O-methyltr 98.2 6.6E-06 2.3E-10 77.2 10.3 57 108-173 201-257 (368)
272 1fp1_D Isoliquiritigenin 2'-O- 98.2 5E-06 1.7E-10 77.9 9.2 79 104-196 202-281 (372)
273 3lkd_A Type I restriction-modi 98.1 6.5E-06 2.2E-10 81.3 9.9 96 88-183 195-307 (542)
274 1wg8_A Predicted S-adenosylmet 98.1 1.9E-06 6.4E-11 77.8 5.4 65 101-173 13-77 (285)
275 3p9c_A Caffeic acid O-methyltr 98.1 9E-06 3.1E-10 76.2 10.1 61 104-173 194-255 (364)
276 2cmg_A Spermidine synthase; tr 98.1 2.2E-06 7.4E-11 77.0 5.4 63 109-174 71-136 (262)
277 3tka_A Ribosomal RNA small sub 98.1 3.6E-06 1.2E-10 77.7 5.7 66 102-172 49-114 (347)
278 3eld_A Methyltransferase; flav 98.1 4.1E-07 1.4E-11 82.3 -0.8 128 108-244 79-237 (300)
279 1fp2_A Isoflavone O-methyltran 98.0 1.2E-05 4E-10 74.8 8.9 75 108-196 186-260 (352)
280 3frh_A 16S rRNA methylase; met 98.0 1.5E-05 5.2E-10 70.5 8.9 59 109-173 104-162 (253)
281 3p8z_A Mtase, non-structural p 98.0 4.5E-06 1.5E-10 73.1 4.0 130 107-244 75-232 (267)
282 4auk_A Ribosomal RNA large sub 97.9 6.1E-06 2.1E-10 77.3 4.6 57 108-175 209-265 (375)
283 3lkz_A Non-structural protein 97.9 1.2E-05 4.2E-10 72.5 5.1 134 107-244 91-250 (321)
284 3lcv_B Sisomicin-gentamicin re 97.8 8.2E-06 2.8E-10 73.0 3.8 61 109-172 131-191 (281)
285 1zg3_A Isoflavanone 4'-O-methy 97.8 2.9E-05 1E-09 72.2 7.7 75 108-196 191-265 (358)
286 3s1s_A Restriction endonucleas 97.8 5.7E-05 1.9E-09 77.1 8.7 94 89-183 294-409 (878)
287 4gqb_A Protein arginine N-meth 97.8 0.00012 4.2E-09 73.2 10.9 65 111-176 358-425 (637)
288 2ld4_A Anamorsin; methyltransf 97.7 1.3E-05 4.6E-10 66.5 2.6 69 105-195 7-76 (176)
289 2zig_A TTHA0409, putative modi 97.5 0.00027 9.3E-09 64.2 8.8 49 109-160 234-282 (297)
290 2wk1_A NOVP; transferase, O-me 97.5 0.00029 1E-08 63.7 8.8 63 110-172 106-199 (282)
291 3ua3_A Protein arginine N-meth 97.4 0.0003 1E-08 70.7 7.8 65 111-176 410-486 (745)
292 1i4w_A Mitochondrial replicati 97.4 0.0004 1.4E-08 64.8 8.1 81 90-175 31-118 (353)
293 3r24_A NSP16, 2'-O-methyl tran 97.3 0.00014 5E-09 65.5 3.9 114 107-240 106-256 (344)
294 2qy6_A UPF0209 protein YFCK; s 97.3 0.00029 9.9E-09 62.9 5.6 66 108-173 58-161 (257)
295 2py6_A Methyltransferase FKBM; 97.2 0.0012 4E-08 62.8 9.5 63 107-169 223-289 (409)
296 1g60_A Adenine-specific methyl 96.9 0.0012 4.1E-08 58.7 5.8 49 109-160 211-259 (260)
297 2k4m_A TR8_protein, UPF0146 pr 96.6 0.0022 7.6E-08 52.1 4.6 39 109-149 34-73 (153)
298 3o4f_A Spermidine synthase; am 96.1 0.02 6.9E-07 51.8 8.7 69 103-173 77-149 (294)
299 2oo3_A Protein involved in cat 96.0 0.00076 2.6E-08 60.8 -0.9 107 71-184 47-170 (283)
300 1g55_A DNA cytosine methyltran 96.0 0.009 3.1E-07 55.3 6.1 57 112-174 3-59 (343)
301 2c7p_A Modification methylase 95.8 0.0064 2.2E-07 56.0 4.1 44 111-156 11-54 (327)
302 3g7u_A Cytosine-specific methy 95.7 0.021 7E-07 53.6 7.4 55 112-174 3-57 (376)
303 2efj_A 3,7-dimethylxanthine me 95.2 0.22 7.6E-06 46.7 12.6 34 111-144 53-102 (384)
304 3b5i_A S-adenosyl-L-methionine 95.2 0.071 2.4E-06 49.9 9.1 45 111-155 53-111 (374)
305 3c6k_A Spermine synthase; sper 95.0 0.043 1.5E-06 51.4 7.0 69 110-180 205-291 (381)
306 1eg2_A Modification methylase 93.9 0.067 2.3E-06 48.9 5.4 49 108-159 240-291 (319)
307 2dph_A Formaldehyde dismutase; 93.7 0.14 4.6E-06 47.9 7.5 47 105-152 180-227 (398)
308 1m6e_X S-adenosyl-L-methionnin 93.7 0.045 1.5E-06 51.0 4.0 63 112-174 53-130 (359)
309 3ubt_Y Modification methylase 93.6 0.084 2.9E-06 47.9 5.6 55 112-175 1-55 (331)
310 2qrv_A DNA (cytosine-5)-methyl 93.5 0.15 5E-06 46.1 7.0 60 109-175 14-74 (295)
311 1boo_A Protein (N-4 cytosine-s 93.5 0.053 1.8E-06 49.6 4.1 50 108-160 250-299 (323)
312 4h0n_A DNMT2; SAH binding, tra 93.2 0.12 4.2E-06 47.5 6.0 56 112-174 4-60 (333)
313 3s2e_A Zinc-containing alcohol 92.6 0.32 1.1E-05 44.2 7.9 51 104-160 160-211 (340)
314 1kol_A Formaldehyde dehydrogen 92.5 0.32 1.1E-05 45.3 7.9 51 105-160 180-231 (398)
315 1f8f_A Benzyl alcohol dehydrog 92.3 0.32 1.1E-05 44.8 7.6 48 105-153 185-233 (371)
316 1pl8_A Human sorbitol dehydrog 92.3 0.31 1.1E-05 44.7 7.5 53 104-161 165-218 (356)
317 3qv2_A 5-cytosine DNA methyltr 91.3 0.33 1.1E-05 44.4 6.4 57 111-175 10-68 (327)
318 1uuf_A YAHK, zinc-type alcohol 90.9 0.43 1.5E-05 44.1 6.9 49 106-160 190-239 (369)
319 1e3j_A NADP(H)-dependent ketos 90.7 0.58 2E-05 42.7 7.5 52 104-161 162-214 (352)
320 3two_A Mannitol dehydrogenase; 90.6 0.4 1.4E-05 43.7 6.3 51 105-161 171-222 (348)
321 3fpc_A NADP-dependent alcohol 90.3 0.51 1.7E-05 43.1 6.7 52 104-160 160-212 (352)
322 3jv7_A ADH-A; dehydrogenase, n 90.2 0.66 2.3E-05 42.1 7.4 50 107-161 168-218 (345)
323 4ej6_A Putative zinc-binding d 89.2 1 3.6E-05 41.4 8.0 53 104-161 176-229 (370)
324 1p0f_A NADP-dependent alcohol 89.0 0.73 2.5E-05 42.4 6.7 51 105-160 186-237 (373)
325 1cdo_A Alcohol dehydrogenase; 88.7 0.77 2.6E-05 42.2 6.7 51 105-160 187-238 (374)
326 2fzw_A Alcohol dehydrogenase c 88.5 0.88 3E-05 41.8 6.9 51 105-160 185-236 (373)
327 2jhf_A Alcohol dehydrogenase E 88.5 0.82 2.8E-05 42.0 6.7 51 105-160 186-237 (374)
328 1e3i_A Alcohol dehydrogenase, 88.4 0.83 2.9E-05 42.0 6.7 51 105-160 190-241 (376)
329 1piw_A Hypothetical zinc-type 88.3 0.75 2.6E-05 42.1 6.3 49 106-160 175-224 (360)
330 3m6i_A L-arabinitol 4-dehydrog 88.2 0.9 3.1E-05 41.5 6.8 50 104-154 173-223 (363)
331 2h6e_A ADH-4, D-arabinose 1-de 88.1 1.1 3.9E-05 40.6 7.3 44 107-153 168-214 (344)
332 3uog_A Alcohol dehydrogenase; 88.0 0.9 3.1E-05 41.7 6.7 51 105-161 184-235 (363)
333 3me5_A Cytosine-specific methy 87.7 0.61 2.1E-05 45.0 5.4 59 111-174 88-146 (482)
334 4eez_A Alcohol dehydrogenase 1 87.7 1.4 4.9E-05 39.8 7.7 51 105-160 158-209 (348)
335 1rjw_A ADH-HT, alcohol dehydro 87.3 1.6 5.5E-05 39.5 7.9 49 106-160 160-209 (339)
336 3uko_A Alcohol dehydrogenase c 87.3 0.7 2.4E-05 42.7 5.4 53 104-161 187-240 (378)
337 4ft4_B DNA (cytosine-5)-methyl 87.1 0.78 2.7E-05 46.8 6.1 46 110-155 211-260 (784)
338 1vj0_A Alcohol dehydrogenase, 86.9 1.4 4.8E-05 40.6 7.3 51 105-160 189-241 (380)
339 3goh_A Alcohol dehydrogenase, 85.2 1.1 3.6E-05 40.2 5.4 47 104-153 136-183 (315)
340 3gms_A Putative NADPH:quinone 84.7 1.1 3.9E-05 40.5 5.4 48 104-153 138-187 (340)
341 4dkj_A Cytosine-specific methy 84.6 0.91 3.1E-05 42.8 4.7 45 112-156 11-59 (403)
342 3ip1_A Alcohol dehydrogenase, 83.7 2 6.9E-05 39.9 6.8 49 107-160 210-259 (404)
343 4a2c_A Galactitol-1-phosphate 82.6 3.6 0.00012 37.0 7.9 55 102-161 152-207 (346)
344 1jvb_A NAD(H)-dependent alcoho 82.4 3.4 0.00012 37.4 7.6 45 106-152 166-213 (347)
345 1h2b_A Alcohol dehydrogenase; 82.2 3.5 0.00012 37.6 7.7 49 106-160 182-232 (359)
346 1pqw_A Polyketide synthase; ro 81.9 2 6.7E-05 35.4 5.4 46 105-152 33-80 (198)
347 2d8a_A PH0655, probable L-thre 81.8 2.2 7.6E-05 38.7 6.1 50 105-160 163-213 (348)
348 2hcy_A Alcohol dehydrogenase 1 80.3 2.8 9.7E-05 37.9 6.3 45 106-152 165-211 (347)
349 2eih_A Alcohol dehydrogenase; 79.8 3.4 0.00012 37.3 6.6 45 106-152 162-208 (343)
350 4fn4_A Short chain dehydrogena 79.4 7.8 0.00027 33.8 8.6 62 110-174 6-68 (254)
351 3pvc_A TRNA 5-methylaminomethy 79.1 0.55 1.9E-05 47.1 1.1 43 110-152 58-111 (689)
352 2dq4_A L-threonine 3-dehydroge 78.8 1.6 5.6E-05 39.5 4.1 47 105-153 160-207 (343)
353 3swr_A DNA (cytosine-5)-methyl 78.2 3.2 0.00011 43.6 6.5 44 111-155 540-583 (1002)
354 4b7c_A Probable oxidoreductase 77.6 3.3 0.00011 37.2 5.8 52 104-160 143-196 (336)
355 3jyn_A Quinone oxidoreductase; 77.6 3.9 0.00013 36.6 6.3 46 106-153 136-183 (325)
356 1v3u_A Leukotriene B4 12- hydr 77.3 4.4 0.00015 36.3 6.6 45 105-151 140-186 (333)
357 2cf5_A Atccad5, CAD, cinnamyl 77.3 4.6 0.00016 36.7 6.7 51 106-161 175-227 (357)
358 2j3h_A NADP-dependent oxidored 76.5 3.8 0.00013 36.9 5.9 46 105-152 150-197 (345)
359 4dvj_A Putative zinc-dependent 76.2 4.5 0.00015 36.9 6.4 51 105-160 161-218 (363)
360 2c0c_A Zinc binding alcohol de 75.8 6.1 0.00021 36.0 7.2 50 105-160 158-209 (362)
361 3qwb_A Probable quinone oxidor 74.6 4.8 0.00016 36.1 6.0 46 106-153 144-191 (334)
362 4eye_A Probable oxidoreductase 73.3 4.2 0.00014 36.7 5.3 47 105-153 154-202 (342)
363 3fwz_A Inner membrane protein 73.2 3.7 0.00013 31.9 4.3 54 112-175 8-62 (140)
364 1yqd_A Sinapyl alcohol dehydro 72.8 7 0.00024 35.6 6.8 51 105-160 181-233 (366)
365 4fs3_A Enoyl-[acyl-carrier-pro 72.8 7 0.00024 33.7 6.4 63 110-173 5-69 (256)
366 3llv_A Exopolyphosphatase-rela 72.7 6 0.0002 30.4 5.4 54 111-174 6-60 (141)
367 3fbg_A Putative arginate lyase 72.0 9.1 0.00031 34.5 7.3 47 105-153 139-193 (346)
368 1iz0_A Quinone oxidoreductase; 71.7 4.2 0.00014 35.9 4.8 47 108-160 123-171 (302)
369 1yb5_A Quinone oxidoreductase; 71.6 7.4 0.00025 35.3 6.6 50 105-160 165-216 (351)
370 3ucx_A Short chain dehydrogena 69.9 23 0.00079 30.3 9.2 62 110-174 10-72 (264)
371 1wma_A Carbonyl reductase [NAD 69.6 16 0.00055 30.9 8.1 62 110-174 3-66 (276)
372 3av4_A DNA (cytosine-5)-methyl 69.4 5.9 0.0002 42.8 6.0 44 111-155 851-894 (1330)
373 1wly_A CAAR, 2-haloacrylate re 69.3 9.8 0.00034 34.0 6.8 47 105-153 140-188 (333)
374 2cdc_A Glucose dehydrogenase g 69.2 7.6 0.00026 35.3 6.1 46 105-152 166-224 (366)
375 1xg5_A ARPG836; short chain de 68.7 21 0.00072 30.7 8.7 64 110-174 31-95 (279)
376 3h7a_A Short chain dehydrogena 68.5 14 0.00047 31.6 7.3 62 110-174 6-68 (252)
377 3vyw_A MNMC2; tRNA wobble urid 68.4 19 0.00064 32.4 8.3 33 111-143 97-134 (308)
378 3ioy_A Short-chain dehydrogena 68.3 20 0.0007 31.8 8.7 64 110-174 7-71 (319)
379 4dup_A Quinone oxidoreductase; 67.6 7.1 0.00024 35.3 5.5 46 106-153 163-210 (353)
380 3qiv_A Short-chain dehydrogena 67.6 22 0.00076 29.9 8.5 62 110-174 8-70 (253)
381 4g65_A TRK system potassium up 67.5 8.2 0.00028 36.7 6.1 56 111-175 3-59 (461)
382 1qor_A Quinone oxidoreductase; 67.2 8.8 0.0003 34.2 6.0 47 105-153 135-183 (327)
383 3tos_A CALS11; methyltransfera 67.0 20 0.00069 31.3 8.1 32 111-142 70-107 (257)
384 3tjr_A Short chain dehydrogena 66.6 22 0.00075 31.2 8.5 64 109-175 29-93 (301)
385 3ic5_A Putative saccharopine d 65.8 18 0.00061 26.1 6.7 54 110-173 4-59 (118)
386 3rih_A Short chain dehydrogena 65.6 8.9 0.0003 33.8 5.6 63 110-174 40-103 (293)
387 4g81_D Putative hexonate dehyd 65.5 13 0.00043 32.4 6.5 61 110-173 8-69 (255)
388 3rkr_A Short chain oxidoreduct 64.8 25 0.00086 29.9 8.3 62 110-174 28-90 (262)
389 3awd_A GOX2181, putative polyo 64.3 29 0.00099 29.2 8.6 62 110-174 12-74 (260)
390 3rku_A Oxidoreductase YMR226C; 64.2 18 0.00061 31.7 7.3 65 110-175 32-100 (287)
391 2j8z_A Quinone oxidoreductase; 63.2 9.9 0.00034 34.4 5.6 45 106-152 158-204 (354)
392 1rjd_A PPM1P, carboxy methyl t 63.1 6.4 0.00022 35.8 4.3 89 84-174 71-179 (334)
393 3lyl_A 3-oxoacyl-(acyl-carrier 63.0 26 0.00089 29.4 8.0 61 111-174 5-66 (247)
394 3o38_A Short chain dehydrogena 62.1 29 0.00099 29.5 8.2 63 110-174 21-85 (266)
395 1oaa_A Sepiapterin reductase; 61.9 22 0.00077 30.1 7.4 63 111-174 6-72 (259)
396 1yb1_A 17-beta-hydroxysteroid 61.7 33 0.0011 29.3 8.6 62 110-174 30-92 (272)
397 3tfo_A Putative 3-oxoacyl-(acy 61.7 26 0.0009 30.2 7.9 61 111-174 4-65 (264)
398 2ae2_A Protein (tropinone redu 61.4 34 0.0012 29.0 8.5 62 110-174 8-70 (260)
399 4da9_A Short-chain dehydrogena 61.2 29 0.00099 30.0 8.1 64 109-175 27-92 (280)
400 2jah_A Clavulanic acid dehydro 61.1 37 0.0013 28.6 8.6 62 110-174 6-68 (247)
401 1ae1_A Tropinone reductase-I; 60.9 35 0.0012 29.2 8.6 62 110-174 20-82 (273)
402 3sju_A Keto reductase; short-c 60.9 27 0.00091 30.2 7.8 62 110-174 23-85 (279)
403 2rhc_B Actinorhodin polyketide 60.6 35 0.0012 29.3 8.6 62 110-174 21-83 (277)
404 3krt_A Crotonyl COA reductase; 60.4 9.3 0.00032 36.0 5.0 49 106-160 224-274 (456)
405 1xu9_A Corticosteroid 11-beta- 60.1 29 0.001 29.9 8.0 63 110-174 27-90 (286)
406 3gaf_A 7-alpha-hydroxysteroid 60.1 25 0.00087 29.9 7.4 62 110-174 11-73 (256)
407 1fmc_A 7 alpha-hydroxysteroid 60.0 38 0.0013 28.2 8.6 62 110-174 10-72 (255)
408 3tqh_A Quinone oxidoreductase; 59.5 22 0.00076 31.4 7.2 51 104-161 146-198 (321)
409 2zb4_A Prostaglandin reductase 58.6 18 0.00062 32.5 6.5 49 104-153 152-204 (357)
410 2b5w_A Glucose dehydrogenase; 58.6 14 0.00047 33.4 5.7 51 105-160 161-223 (357)
411 2uyo_A Hypothetical protein ML 58.0 86 0.0029 27.9 10.8 59 112-173 104-164 (310)
412 3o26_A Salutaridine reductase; 57.7 30 0.001 29.9 7.6 63 110-174 11-74 (311)
413 3r1i_A Short-chain type dehydr 57.1 26 0.00089 30.3 7.1 62 110-174 31-93 (276)
414 3v8b_A Putative dehydrogenase, 56.8 32 0.0011 29.9 7.6 62 110-174 27-89 (283)
415 4egf_A L-xylulose reductase; s 56.6 38 0.0013 28.9 8.0 63 110-175 19-83 (266)
416 1xa0_A Putative NADPH dependen 56.6 6.6 0.00023 35.0 3.1 49 106-160 144-195 (328)
417 3nzo_A UDP-N-acetylglucosamine 56.4 42 0.0014 30.7 8.7 64 110-174 34-101 (399)
418 3pk0_A Short-chain dehydrogena 56.3 31 0.0011 29.4 7.4 63 110-174 9-72 (262)
419 3gaz_A Alcohol dehydrogenase s 56.0 17 0.00058 32.6 5.8 49 105-160 145-195 (343)
420 1iy8_A Levodione reductase; ox 56.0 51 0.0018 27.9 8.8 64 110-174 12-76 (267)
421 3imf_A Short chain dehydrogena 56.0 22 0.00074 30.3 6.3 62 110-174 5-67 (257)
422 1zem_A Xylitol dehydrogenase; 55.9 40 0.0014 28.6 8.0 62 110-174 6-68 (262)
423 3cxt_A Dehydrogenase with diff 55.6 41 0.0014 29.3 8.2 62 110-174 33-95 (291)
424 3l77_A Short-chain alcohol deh 55.5 53 0.0018 27.1 8.6 61 111-174 2-64 (235)
425 3grk_A Enoyl-(acyl-carrier-pro 55.5 39 0.0013 29.5 8.0 63 109-174 29-93 (293)
426 3oj0_A Glutr, glutamyl-tRNA re 55.5 15 0.00052 28.3 4.7 51 101-153 11-62 (144)
427 2bd0_A Sepiapterin reductase; 55.3 17 0.00057 30.4 5.4 61 111-174 2-70 (244)
428 3sx2_A Putative 3-ketoacyl-(ac 55.3 49 0.0017 28.2 8.6 62 110-174 12-86 (278)
429 3ai3_A NADPH-sorbose reductase 55.1 51 0.0017 27.9 8.6 62 110-174 6-69 (263)
430 3pxx_A Carveol dehydrogenase; 55.1 50 0.0017 28.2 8.6 62 110-174 9-83 (287)
431 3ftp_A 3-oxoacyl-[acyl-carrier 55.1 33 0.0011 29.5 7.4 62 110-174 27-89 (270)
432 3svt_A Short-chain type dehydr 54.8 44 0.0015 28.7 8.2 64 110-174 10-75 (281)
433 3lf2_A Short chain oxidoreduct 54.8 54 0.0019 27.8 8.7 63 110-174 7-71 (265)
434 3t4x_A Oxidoreductase, short c 54.5 42 0.0014 28.6 7.9 63 110-173 9-72 (267)
435 4ibo_A Gluconate dehydrogenase 54.3 25 0.00087 30.3 6.5 62 110-174 25-87 (271)
436 3iup_A Putative NADPH:quinone 54.2 8.2 0.00028 35.4 3.4 47 109-161 169-218 (379)
437 2qq5_A DHRS1, dehydrogenase/re 54.2 41 0.0014 28.5 7.8 62 110-174 4-66 (260)
438 3pgx_A Carveol dehydrogenase; 54.1 52 0.0018 28.2 8.5 63 109-174 13-89 (280)
439 1geg_A Acetoin reductase; SDR 54.1 53 0.0018 27.6 8.5 60 112-174 3-63 (256)
440 3t7c_A Carveol dehydrogenase; 54.0 53 0.0018 28.6 8.7 62 110-174 27-101 (299)
441 4f3n_A Uncharacterized ACR, CO 53.8 12 0.00041 35.4 4.5 47 111-157 138-188 (432)
442 2zat_A Dehydrogenase/reductase 53.6 47 0.0016 28.1 8.1 62 110-174 13-75 (260)
443 4a0s_A Octenoyl-COA reductase/ 53.6 14 0.00048 34.5 5.0 50 106-161 216-267 (447)
444 3nyw_A Putative oxidoreductase 53.5 43 0.0015 28.3 7.8 64 110-174 6-71 (250)
445 1tt7_A YHFP; alcohol dehydroge 53.1 9.7 0.00033 33.9 3.6 49 106-160 145-196 (330)
446 3ps9_A TRNA 5-methylaminomethy 52.5 19 0.00066 35.6 6.0 39 111-149 67-119 (676)
447 2c07_A 3-oxoacyl-(acyl-carrier 52.0 61 0.0021 27.8 8.6 62 110-174 43-105 (285)
448 1zkd_A DUF185; NESG, RPR58, st 51.9 24 0.00081 32.8 6.1 53 112-167 82-140 (387)
449 4imr_A 3-oxoacyl-(acyl-carrier 51.7 29 0.00098 30.0 6.4 63 110-175 32-95 (275)
450 4g65_A TRK system potassium up 51.0 23 0.00079 33.5 6.1 65 102-174 224-290 (461)
451 3uve_A Carveol dehydrogenase ( 50.8 55 0.0019 28.1 8.1 62 110-174 10-88 (286)
452 1vl8_A Gluconate 5-dehydrogena 50.3 65 0.0022 27.4 8.5 62 110-174 20-83 (267)
453 3i1j_A Oxidoreductase, short c 50.2 49 0.0017 27.5 7.6 60 110-171 13-73 (247)
454 1xq1_A Putative tropinone redu 50.0 54 0.0018 27.6 7.9 62 110-174 13-75 (266)
455 3tsc_A Putative oxidoreductase 49.7 71 0.0024 27.2 8.7 62 110-174 10-85 (277)
456 3tox_A Short chain dehydrogena 49.6 24 0.00083 30.6 5.6 62 110-174 7-69 (280)
457 2uvd_A 3-oxoacyl-(acyl-carrier 49.2 58 0.002 27.2 7.9 61 111-174 4-66 (246)
458 1w6u_A 2,4-dienoyl-COA reducta 48.8 66 0.0023 27.6 8.4 62 110-174 25-88 (302)
459 1gee_A Glucose 1-dehydrogenase 48.5 58 0.002 27.3 7.8 62 110-174 6-69 (261)
460 1yxm_A Pecra, peroxisomal tran 48.5 72 0.0025 27.5 8.6 64 110-174 17-84 (303)
461 3nx4_A Putative oxidoreductase 48.3 14 0.00047 32.8 3.8 49 106-160 141-192 (324)
462 2pnf_A 3-oxoacyl-[acyl-carrier 48.2 59 0.002 26.9 7.7 62 110-174 6-69 (248)
463 1ja9_A 4HNR, 1,3,6,8-tetrahydr 47.9 61 0.0021 27.3 7.9 62 110-174 20-83 (274)
464 1e7w_A Pteridine reductase; di 47.7 66 0.0022 27.8 8.2 63 110-175 8-73 (291)
465 4iin_A 3-ketoacyl-acyl carrier 47.5 61 0.0021 27.6 7.9 62 110-174 28-91 (271)
466 1lnq_A MTHK channels, potassiu 47.5 14 0.00049 33.0 3.8 53 111-174 115-167 (336)
467 2aef_A Calcium-gated potassium 47.4 24 0.00082 29.5 5.1 54 110-174 8-61 (234)
468 3afn_B Carbonyl reductase; alp 46.9 39 0.0013 28.2 6.4 62 110-174 6-69 (258)
469 4dry_A 3-oxoacyl-[acyl-carrier 46.7 44 0.0015 28.9 6.8 63 110-174 32-95 (281)
470 3s55_A Putative short-chain de 46.4 84 0.0029 26.8 8.6 62 110-174 9-83 (281)
471 3l4b_C TRKA K+ channel protien 46.4 15 0.00052 30.5 3.6 51 114-173 3-54 (218)
472 3k31_A Enoyl-(acyl-carrier-pro 46.3 45 0.0015 29.1 6.9 62 110-174 29-92 (296)
473 4fc7_A Peroxisomal 2,4-dienoyl 46.1 82 0.0028 26.9 8.5 62 110-174 26-89 (277)
474 2z1n_A Dehydrogenase; reductas 45.6 86 0.0029 26.4 8.5 64 110-174 6-70 (260)
475 3oid_A Enoyl-[acyl-carrier-pro 44.9 66 0.0022 27.2 7.6 62 110-174 3-66 (258)
476 3l9w_A Glutathione-regulated p 44.7 13 0.00045 34.7 3.2 53 111-173 4-57 (413)
477 3ppi_A 3-hydroxyacyl-COA dehyd 44.6 67 0.0023 27.4 7.7 59 110-174 29-88 (281)
478 3oec_A Carveol dehydrogenase ( 44.3 75 0.0026 27.9 8.1 62 110-174 45-119 (317)
479 1sny_A Sniffer CG10964-PA; alp 44.3 40 0.0014 28.4 6.1 62 110-175 20-85 (267)
480 3c85_A Putative glutathione-re 44.2 30 0.001 27.6 5.0 53 111-173 39-93 (183)
481 2qhx_A Pteridine reductase 1; 44.1 77 0.0026 28.0 8.2 63 110-175 45-110 (328)
482 3f1l_A Uncharacterized oxidore 43.9 64 0.0022 27.1 7.3 60 110-171 11-71 (252)
483 1lss_A TRK system potassium up 43.3 41 0.0014 25.0 5.4 54 111-173 4-58 (140)
484 1mxh_A Pteridine reductase 2; 43.2 73 0.0025 27.0 7.7 62 110-174 10-74 (276)
485 4dmm_A 3-oxoacyl-[acyl-carrier 42.6 82 0.0028 26.9 7.9 62 110-174 27-90 (269)
486 2b4q_A Rhamnolipids biosynthes 41.8 53 0.0018 28.2 6.6 61 110-174 28-89 (276)
487 4eso_A Putative oxidoreductase 41.3 81 0.0028 26.6 7.6 59 110-174 7-66 (255)
488 1xkq_A Short-chain reductase f 41.0 65 0.0022 27.5 7.0 64 110-174 5-70 (280)
489 2cfc_A 2-(R)-hydroxypropyl-COM 40.8 64 0.0022 26.7 6.8 61 111-174 2-64 (250)
490 3oig_A Enoyl-[acyl-carrier-pro 40.8 84 0.0029 26.4 7.6 65 110-175 6-72 (266)
491 2gdz_A NAD+-dependent 15-hydro 40.6 72 0.0025 26.9 7.2 64 110-174 6-70 (267)
492 1id1_A Putative potassium chan 40.4 45 0.0015 25.7 5.3 57 112-175 4-62 (153)
493 4f6c_A AUSA reductase domain p 40.4 2.1E+02 0.0072 25.9 12.1 65 110-175 68-143 (427)
494 3iht_A S-adenosyl-L-methionine 40.4 59 0.002 26.4 5.8 60 81-143 13-72 (174)
495 4ina_A Saccharopine dehydrogen 40.1 1E+02 0.0034 28.4 8.5 58 113-173 3-64 (405)
496 3a28_C L-2.3-butanediol dehydr 39.8 64 0.0022 27.2 6.7 61 111-174 2-65 (258)
497 1gu7_A Enoyl-[acyl-carrier-pro 39.7 36 0.0012 30.5 5.3 54 106-161 162-218 (364)
498 1edo_A Beta-keto acyl carrier 39.3 94 0.0032 25.5 7.6 60 112-174 2-63 (244)
499 2yut_A Putative short-chain ox 39.2 43 0.0015 26.9 5.3 53 113-174 2-54 (207)
500 1x1t_A D(-)-3-hydroxybutyrate 39.2 74 0.0025 26.8 7.0 61 111-174 4-67 (260)
No 1
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=100.00 E-value=1.2e-42 Score=323.57 Aligned_cols=274 Identities=18% Similarity=0.238 Sum_probs=213.4
Q ss_pred cccccCCCChHHHHH-HHHHcCCChh--hhh-hcCCCCeEEEecC---ChHHHHHHHHHhcCCceEEeccCCCcEEeCC-
Q 021397 6 DGEISKLPLPEAFLD-FLKENGLDPS--VYS-AADSTPRYIRLKT---GNEADLEEIEAELKCKLEKVVWLSGFYSLPP- 77 (313)
Q Consensus 6 ~~~~~~ys~P~w~~~-~~~~~g~~~~--~~~-~~~~~~~~~Rvn~---~~~~~~~~L~~~~g~~~~~~~~~~~~~~l~~- 77 (313)
..|+.+||+|+|+++ |.+.+| +.. ++. .+.++|+++|||+ +++++.+.|++. |+.+++.+|+|+++.+..
T Consensus 8 ~~l~~~~~~P~w~~~~~~~~~g-~~~~~~~~~~~~~~p~~~RvN~~k~~~~~~~~~L~~~-g~~~~~~~~~~~~~~~~~~ 85 (315)
T 1ixk_A 8 LDKLLRLGYSKLFADRYFQLWG-ERAIRIAEAMEKPLPRCFRVNTLKISVQDLVKRLNKK-GFQFKRVPWAKEGFCLTRE 85 (315)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHT-THHHHHHHHTTSCCCCEEEECTTTSCHHHHHHHHHHT-TCEEEEETTEEEEEEEEEC
T ss_pred HHHHHHhCCcHHHHHHHHHHcc-HHHHHHHHHcCCCCCeEEEEeCCCCCHHHHHHHHHhC-CCeeeECCCCCceEEEeCC
Confidence 457889999999999 788899 533 444 3588999999997 457788888876 999999999999988853
Q ss_pred CCCCcccccccCCeEEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHH
Q 021397 78 DIKIATSMAYKQGKIYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQK 157 (313)
Q Consensus 78 ~~~~~~~~~~~~G~~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~ 157 (313)
+..+..++.|.+|++++||.+|++++.++++++|++|||+|||||++|.++++.+++.+.|+|+|+|+.|++.+++|+++
T Consensus 86 ~~~~~~~~~~~~G~~~~qd~~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~ 165 (315)
T 1ixk_A 86 PFSITSTPEFLTGLIYIQEASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSR 165 (315)
T ss_dssp SSCGGGSHHHHTTSEEECCHHHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHH
T ss_pred CCCcccChhHhcceEEEeCHHHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHH
Confidence 34589999999999999999999999999999999999999999999999999987778999999999999999999999
Q ss_pred cCCCCcEEEEecCCCC-------CCccccc-cccCcccccccccccccccccccccchhHHHHHHHHHHHHHhhhhhccc
Q 021397 158 YALGDRCRLFVADGTT-------FSLAPLR-LLLDPGSCNSVLQEKDDTFREWTSRIPWKERKRAVKARENAASKAIVRS 229 (313)
Q Consensus 158 ~g~~~~v~~~~~D~~~-------~d~v~~D-~~l~~~s~sg~l~~~p~~~~~w~~~~~~~~~~~~~q~~~l~~~~~~~r~ 229 (313)
+|+. +++++++|+.. ||.+++| || |+.|+++++|++...|+. .........|.+++..+.++++|
T Consensus 166 ~g~~-~v~~~~~D~~~~~~~~~~fD~Il~d~Pc----sg~g~~~~~p~~~~~~~~--~~~~~~~~~q~~~L~~~~~~Lkp 238 (315)
T 1ixk_A 166 LGVL-NVILFHSSSLHIGELNVEFDKILLDAPC----TGSGTIHKNPERKWNRTM--DDIKFCQGLQMRLLEKGLEVLKP 238 (315)
T ss_dssp HTCC-SEEEESSCGGGGGGGCCCEEEEEEECCT----TSTTTCC--------CCH--HHHHHHHHHHHHHHHHHHHHEEE
T ss_pred hCCC-eEEEEECChhhcccccccCCEEEEeCCC----CCcccccCChhHhhcCCH--HHHHHHHHHHHHHHHHHHHhCCC
Confidence 9986 69999999864 5556666 66 888899999998555544 34455577888888888888866
Q ss_pred cCcceeEeecCCcEEEEEcCCCCCcccchhhhhhcccceeeccccccCCCcccccccccccccccccccCCcccc
Q 021397 230 EHPELIFYGRRSGIVGLTKEEIYQSVCNSEVSSSGYDKVLVDAECTHDGSIKHIQKFENWGWTTLQRRVLDPERT 304 (313)
Q Consensus 230 ~~~El~~~~k~gG~lvysTcs~~~p~Ene~vv~~~~~~~l~d~e~~~~~~~~~~~~~~~w~~~~~~~~~~~~~r~ 304 (313)
||+++|+||| ++|+|||+++...+++. +.+.. +.+ ...+++..|.+..+.+++..+.|+
T Consensus 239 -----------GG~lv~stcs-~~~~Ene~~v~~~l~~~--~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~r~ 297 (315)
T 1ixk_A 239 -----------GGILVYSTCS-LEPEENEFVIQWALDNF--DVELL-PLK-YGEPALTNPFGIELSEEIKNARRL 297 (315)
T ss_dssp -----------EEEEEEEESC-CCGGGTHHHHHHHHHHS--SEEEE-CCC-SSEECCSSGGGCCCCGGGGGSEEE
T ss_pred -----------CCEEEEEeCC-CChHHhHHHHHHHHhcC--CCEEe-cCC-ccccCcccccccccccccCCEEEE
Confidence 9999999999 99999999996655431 11110 111 223566777766555544444443
No 2
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=100.00 E-value=3.8e-41 Score=329.40 Aligned_cols=239 Identities=18% Similarity=0.236 Sum_probs=197.1
Q ss_pred cccCCCChHHHHH-HHHHcCCC---hhhhh-hcCCCCeEEEecC---ChHHHHHHHHHhcCCceEEeccCCCcEEeCCCC
Q 021397 8 EISKLPLPEAFLD-FLKENGLD---PSVYS-AADSTPRYIRLKT---GNEADLEEIEAELKCKLEKVVWLSGFYSLPPDI 79 (313)
Q Consensus 8 ~~~~ys~P~w~~~-~~~~~g~~---~~~~~-~~~~~~~~~Rvn~---~~~~~~~~L~~~~g~~~~~~~~~~~~~~l~~~~ 79 (313)
|...|++|+||++ |.+.+|.+ ..++. .+.++|+++|||+ +.+++.+.|++. |+.+++++|+|+++.+....
T Consensus 2 ~~~~~~~P~~~~~~~~~~~g~~~~~~~~~~a~~~~~p~~lRvN~lk~~~~~~~~~L~~~-g~~~~~~~~~~~~~~~~~~~ 80 (479)
T 2frx_A 2 AQHTVYFPDAFLTQMREAMPSTLSFDDFLAACQRPLRRSIRVNTLKISVADFLQLTAPY-GWTLTPIPWCEEGFWIERDN 80 (479)
T ss_dssp -----CCCHHHHHHHGGGCC----CHHHHHHHTSCCCCCEEECTTTCCHHHHHHHHGGG-CCCCCEETTEEEEEC-----
T ss_pred CCccccCcHHHHHHHHHHcCccHHHHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHHHc-CCceeecCCCCceEEEecCc
Confidence 3456899999999 66678875 23444 4588999999997 457777888766 99999999999998886421
Q ss_pred ----CCcccccccCCeEEEecHHHHHHHHhcCCC--CCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHH
Q 021397 80 ----KIATSMAYKQGKIYGIDAASGAAVSALNIS--AGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRT 153 (313)
Q Consensus 80 ----~~~~~~~~~~G~~~~Qd~ss~~~~~~l~~~--~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~ 153 (313)
.+..+++|.+|.+++||++||+++.+++++ +|++|||+|||||+||+++|+.+++.+.|+|+|+|+.|++.+++
T Consensus 81 ~~~~~~~~~~~~~~G~~~~Qd~~s~l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~ 160 (479)
T 2frx_A 81 EDALPLGSTAEHLSGLFYIQEASSMLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHA 160 (479)
T ss_dssp ----CGGGSHHHHTTSEEECCHHHHHHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHH
T ss_pred ccccCcccChHHhCcEEEEECHHHHHHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH
Confidence 578999999999999999999999999998 99999999999999999999999877899999999999999999
Q ss_pred HHHHcCCCCcEEEEecCCCC--------CCccccc-cccCcccccccccccccccccccccchhHHHHHHHHHHHHHhhh
Q 021397 154 LLQKYALGDRCRLFVADGTT--------FSLAPLR-LLLDPGSCNSVLQEKDDTFREWTSRIPWKERKRAVKARENAASK 224 (313)
Q Consensus 154 ~~~~~g~~~~v~~~~~D~~~--------~d~v~~D-~~l~~~s~sg~l~~~p~~~~~w~~~~~~~~~~~~~q~~~l~~~~ 224 (313)
|++++|+. ++.++++|+.. ||.|++| || |++|+++++|++...|++. +.......|.+++..+.
T Consensus 161 n~~r~g~~-nv~~~~~D~~~~~~~~~~~fD~Il~D~Pc----Sg~G~~~~~pd~~~~~~~~--~~~~l~~~q~~iL~~a~ 233 (479)
T 2frx_A 161 NISRCGIS-NVALTHFDGRVFGAAVPEMFDAILLDAPC----SGEGVVRKDPDALKNWSPE--SNQEIAATQRELIDSAF 233 (479)
T ss_dssp HHHHHTCC-SEEEECCCSTTHHHHSTTCEEEEEEECCC----CCGGGGGTCTTSSSSCCHH--HHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCC-cEEEEeCCHHHhhhhccccCCEEEECCCc----CCcccccCCHHHHhhcCHh--HHHHHHHHHHHHHHHHH
Confidence 99999986 79999999853 5667777 77 8889999999987677654 34455678888899999
Q ss_pred hhccccCcceeEeecCCcEEEEEcCCCCCcccchhhhhhccc
Q 021397 225 AIVRSEHPELIFYGRRSGIVGLTKEEIYQSVCNSEVSSSGYD 266 (313)
Q Consensus 225 ~~~r~~~~El~~~~k~gG~lvysTcs~~~p~Ene~vv~~~~~ 266 (313)
++++| ||+||||||| ++++|||++|.+.++
T Consensus 234 ~~Lkp-----------GG~LvysTcs-~~~~Ene~vv~~~l~ 263 (479)
T 2frx_A 234 HALRP-----------GGTLVYSTCT-LNQEENEAVCLWLKE 263 (479)
T ss_dssp HHEEE-----------EEEEEEEESC-CSSTTTHHHHHHHHH
T ss_pred HhcCC-----------CCEEEEeccc-CCcccCHHHHHHHHH
Confidence 88866 9999999999 999999999976654
No 3
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=100.00 E-value=9.6e-41 Score=324.27 Aligned_cols=234 Identities=18% Similarity=0.238 Sum_probs=198.9
Q ss_pred CChHHHHH-HHHHcCCChh-hhh-hcCC-CCeEEEecCChHHHHHHHHHhcCCceEEeccCCCcEEeCCCCCCccccccc
Q 021397 13 PLPEAFLD-FLKENGLDPS-VYS-AADS-TPRYIRLKTGNEADLEEIEAELKCKLEKVVWLSGFYSLPPDIKIATSMAYK 88 (313)
Q Consensus 13 s~P~w~~~-~~~~~g~~~~-~~~-~~~~-~~~~~Rvn~~~~~~~~~L~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 88 (313)
.+|+||++ |.+.+|.+.. ++. .+++ +|.++|||+.+.+. +.+.+..|+.+++++|+|+++++.....+..++.|.
T Consensus 1 ~lP~w~~~~~~~~~g~e~~~~l~a~~~~~~~~~lRvN~lk~~~-~~~~~~l~~~~~~~~~~~~g~~l~~~~~~~~~~~~~ 79 (464)
T 3m6w_A 1 MLPKAFLSRMAELLGEEFPAFLKALTEGKRTYGLRVNTLKLPP-EAFQRISPWPLRPIPWCQEGFYYPEEARPGPHPFFY 79 (464)
T ss_dssp CCCHHHHHHHHHHHGGGHHHHHHHHHTSCCCCEEEECTTTCCH-HHHHHHCSSCCEEETTEEEEEECCTTCCCSSSHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCCCH-HHHHHHcCCCceecCCCCceEEECCCCCcccChHHh
Confidence 38999999 7778896633 443 4577 89999999865442 222223478889999999999998655689999999
Q ss_pred CCeEEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEe
Q 021397 89 QGKIYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFV 168 (313)
Q Consensus 89 ~G~~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~ 168 (313)
+|++++||++|++++.++++++|++|||+|||||++|+++|+.+++.+.|+|+|+|+.|++.+++|++++|+. +.+++
T Consensus 80 ~G~~~vQd~ss~l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~--v~~~~ 157 (464)
T 3m6w_A 80 AGLYYIQEPSAQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP--LAVTQ 157 (464)
T ss_dssp TTSEEECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC--CEEEC
T ss_pred CCeEEEECHHHHHHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe--EEEEE
Confidence 9999999999999999999999999999999999999999999987789999999999999999999999984 89999
Q ss_pred cCCC--------CCCccccc-cccCcccccccccccccccccccccchhHHHHHHHHHHHHHhhhhhccccCcceeEeec
Q 021397 169 ADGT--------TFSLAPLR-LLLDPGSCNSVLQEKDDTFREWTSRIPWKERKRAVKARENAASKAIVRSEHPELIFYGR 239 (313)
Q Consensus 169 ~D~~--------~~d~v~~D-~~l~~~s~sg~l~~~p~~~~~w~~~~~~~~~~~~~q~~~l~~~~~~~r~~~~El~~~~k 239 (313)
+|+. .||.|++| || |++|+++++|++...|++ .........|.+++..+.++++|
T Consensus 158 ~Da~~l~~~~~~~FD~Il~D~Pc----Sg~G~~rr~pd~~~~~~~--~~~~~l~~~Q~~iL~~a~~~Lkp---------- 221 (464)
T 3m6w_A 158 APPRALAEAFGTYFHRVLLDAPC----SGEGMFRKDREAARHWGP--SAPKRMAEVQKALLAQASRLLGP---------- 221 (464)
T ss_dssp SCHHHHHHHHCSCEEEEEEECCC----CCGGGTTTCTTSGGGCCT--THHHHHHHHHHHHHHHHHTTEEE----------
T ss_pred CCHHHhhhhccccCCEEEECCCc----CCccccccChHHhhhcCH--HHHHHHHHHHHHHHHHHHHhcCC----------
Confidence 9963 47788888 88 999999999998666654 44455678889999999988866
Q ss_pred CCcEEEEEcCCCCCcccchhhhhhcccc
Q 021397 240 RSGIVGLTKEEIYQSVCNSEVSSSGYDK 267 (313)
Q Consensus 240 ~gG~lvysTcs~~~p~Ene~vv~~~~~~ 267 (313)
||+||||||| ++|+|||++|.+.+++
T Consensus 222 -GG~LvysTCs-~~~eEne~vv~~~l~~ 247 (464)
T 3m6w_A 222 -GGVLVYSTCT-FAPEENEGVVAHFLKA 247 (464)
T ss_dssp -EEEEEEEESC-CCGGGTHHHHHHHHHH
T ss_pred -CcEEEEEecc-CchhcCHHHHHHHHHH
Confidence 9999999999 9999999999776654
No 4
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=100.00 E-value=4.3e-41 Score=326.33 Aligned_cols=231 Identities=15% Similarity=0.205 Sum_probs=194.8
Q ss_pred CCChHHHHH-HHHHcCCChh-hhh-hcCCCC-eEEEecCChHHHHHHHHHhcCCceE---EeccCCCcEEeCCCCCCccc
Q 021397 12 LPLPEAFLD-FLKENGLDPS-VYS-AADSTP-RYIRLKTGNEADLEEIEAELKCKLE---KVVWLSGFYSLPPDIKIATS 84 (313)
Q Consensus 12 ys~P~w~~~-~~~~~g~~~~-~~~-~~~~~~-~~~Rvn~~~~~~~~~L~~~~g~~~~---~~~~~~~~~~l~~~~~~~~~ 84 (313)
+++|+||++ |.+.+|.+.. ++. .++++| .++|||+.+.+ .+.+..|+.++ +++|+|++++ . ..+..+
T Consensus 6 ~~~P~w~~~~~~~~~g~e~~~~~~a~~~~~~~~~lRvN~lk~~---~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~ 79 (456)
T 3m4x_A 6 TTLPQQFIKKYRLLLGEEASDFFSALEQGSVKKGFRWNPLKPA---GLDMVQTYHSEELQPAPYSNEGFL-G--TVNGKS 79 (456)
T ss_dssp -CCCHHHHHHHHHHHGGGHHHHHHHHHHCCCCCEEECCTTSTT---HHHHHHHHTCSSCCBCTTCTTEEE-S--CCCTTS
T ss_pred hhChHHHHHHHHHHhCHHHHHHHHHcCCCCCCcEEEEcCccHH---HHHHhcCCcccccCCCCCCcceEE-c--CCCCCC
Confidence 689999999 7778896633 443 457888 99999986642 22212255556 8999999988 3 246899
Q ss_pred ccccCCeEEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcE
Q 021397 85 MAYKQGKIYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRC 164 (313)
Q Consensus 85 ~~~~~G~~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v 164 (313)
+.|.+|++++||++||+++.++++++|++|||+|||||+||+++|+.+++.+.|+|+|+|+.|++.+++|++++|+. ++
T Consensus 80 ~~~~~G~~~vQd~ss~l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~-nv 158 (456)
T 3m4x_A 80 FLHQAGYEYSQEPSAMIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVS-NA 158 (456)
T ss_dssp HHHHTTSCEECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCS-SE
T ss_pred hHHhCCcEEEECHHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-ce
Confidence 99999999999999999999999999999999999999999999999987789999999999999999999999996 79
Q ss_pred EEEecCCC--------CCCccccc-cccCcccccccccccccccccccccchhHHHHHHHHHHHHHhhhhhccccCccee
Q 021397 165 RLFVADGT--------TFSLAPLR-LLLDPGSCNSVLQEKDDTFREWTSRIPWKERKRAVKARENAASKAIVRSEHPELI 235 (313)
Q Consensus 165 ~~~~~D~~--------~~d~v~~D-~~l~~~s~sg~l~~~p~~~~~w~~~~~~~~~~~~~q~~~l~~~~~~~r~~~~El~ 235 (313)
.++++|+. .||.|++| || |++|+++++|++...|+.. ........|.+++..+.++++|
T Consensus 159 ~v~~~Da~~l~~~~~~~FD~Il~DaPC----Sg~G~~rr~p~~~~~~~~~--~~~~l~~~Q~~iL~~a~~~Lkp------ 226 (456)
T 3m4x_A 159 IVTNHAPAELVPHFSGFFDRIVVDAPC----SGEGMFRKDPNAIKEWTEE--SPLYCQKRQQEILSSAIKMLKN------ 226 (456)
T ss_dssp EEECCCHHHHHHHHTTCEEEEEEECCC----CCGGGTTTCHHHHHHCCTT--HHHHHHHHHHHHHHHHHHTEEE------
T ss_pred EEEeCCHHHhhhhccccCCEEEECCCC----CCccccccCHHHhhhcCHH--HHHHHHHHHHHHHHHHHHhcCC------
Confidence 99999973 47788888 88 9999999999986666554 4455678888999999998866
Q ss_pred EeecCCcEEEEEcCCCCCcccchhhhhhcccc
Q 021397 236 FYGRRSGIVGLTKEEIYQSVCNSEVSSSGYDK 267 (313)
Q Consensus 236 ~~~k~gG~lvysTcs~~~p~Ene~vv~~~~~~ 267 (313)
||+||||||| ++|+|||++|.+.+++
T Consensus 227 -----GG~LvYsTCs-~~~eEne~vv~~~l~~ 252 (456)
T 3m4x_A 227 -----KGQLIYSTCT-FAPEENEEIISWLVEN 252 (456)
T ss_dssp -----EEEEEEEESC-CCGGGTHHHHHHHHHH
T ss_pred -----CcEEEEEEee-cccccCHHHHHHHHHh
Confidence 9999999999 9999999999776654
No 5
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.1e-39 Score=317.40 Aligned_cols=239 Identities=18% Similarity=0.225 Sum_probs=204.7
Q ss_pred ccccCCCChHHHHH-HHHHcCCChh--hhh-hc-CCCCeEEEecC---ChHHHHHHHHHhcCCceEEeccCCCcEEeCCC
Q 021397 7 GEISKLPLPEAFLD-FLKENGLDPS--VYS-AA-DSTPRYIRLKT---GNEADLEEIEAELKCKLEKVVWLSGFYSLPPD 78 (313)
Q Consensus 7 ~~~~~ys~P~w~~~-~~~~~g~~~~--~~~-~~-~~~~~~~Rvn~---~~~~~~~~L~~~~g~~~~~~~~~~~~~~l~~~ 78 (313)
.++.+||+|+|+++ |.+.+| +.+ ++. .+ .++|+++|+|+ +++++.+.|+++ |+.+++.+|+|+++.+...
T Consensus 150 ~~~~~~~~P~w~~~~~~~~~g-~~~~~~~~a~~~~~~~~~~Rvn~~k~~~~~~~~~L~~~-g~~~~~~~~~~~~~~~~~~ 227 (450)
T 2yxl_A 150 ELEWKYLAPSWLIERVKGILG-DETEDFFRSVNKRHEWISIRVNTLKANVEEVIGELEED-GVEVVRSERVPTILKIKGP 227 (450)
T ss_dssp HHHHHHTSCHHHHHHHHHHHG-GGHHHHHHHHHCCCCEEEEEECTTTCCHHHHHHHHHHT-TCCEEECSSCTTEEEEESC
T ss_pred hhhhHhcCcHHHHHHHHHHhh-HHHHHHHHhcCCCCCCEEEEEcCCCCCHHHHHHHHHhC-CccceecCccCceEEeCCC
Confidence 36778999999999 788899 433 443 46 78999999997 457788888876 9999999999999999655
Q ss_pred CCCcccccccCCeEEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHc
Q 021397 79 IKIATSMAYKQGKIYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKY 158 (313)
Q Consensus 79 ~~~~~~~~~~~G~~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~ 158 (313)
..+..++.|.+|++++||.+|++++.++++++|++|||+|||||++|.++++.+++.+.|+|+|+++.+++.++++++++
T Consensus 228 ~~~~~~~~~~~G~~~~qd~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~ 307 (450)
T 2yxl_A 228 YNFDTSSAFNEGKIIVQEEASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRM 307 (450)
T ss_dssp CCTTSCHHHHTTSEEECCHHHHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHT
T ss_pred CCcccCchhhCceEEecCchhHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHc
Confidence 57899999999999999999999999999999999999999999999999999876689999999999999999999999
Q ss_pred CCCCcEEEEecCCCC---------CCccccc-cccCcccccccccccccccccccccchhHHHHHHHHHHHHHhhhhhcc
Q 021397 159 ALGDRCRLFVADGTT---------FSLAPLR-LLLDPGSCNSVLQEKDDTFREWTSRIPWKERKRAVKARENAASKAIVR 228 (313)
Q Consensus 159 g~~~~v~~~~~D~~~---------~d~v~~D-~~l~~~s~sg~l~~~p~~~~~w~~~~~~~~~~~~~q~~~l~~~~~~~r 228 (313)
|+. +++++++|+.. ||.+++| || |++|+++++|++. |.....+.......|..++..+.++++
T Consensus 308 g~~-~v~~~~~D~~~~~~~~~~~~fD~Vl~D~Pc----sg~g~~~~~pd~~--~~~~~~~~~~l~~~q~~iL~~a~~~Lk 380 (450)
T 2yxl_A 308 GIK-IVKPLVKDARKAPEIIGEEVADKVLLDAPC----TSSGTIGKNPELR--WRLREDKINEMSQLQRELLESAARLVK 380 (450)
T ss_dssp TCC-SEEEECSCTTCCSSSSCSSCEEEEEEECCC----CCGGGTTTSTTHH--HHCCTTSHHHHHHHHHHHHHHHHTTEE
T ss_pred CCC-cEEEEEcChhhcchhhccCCCCEEEEcCCC----CCCeeeccChhhh--hhCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 986 79999999854 4556666 66 8888999999984 544445556667788888888888876
Q ss_pred ccCcceeEeecCCcEEEEEcCCCCCcccchhhhhhccc
Q 021397 229 SEHPELIFYGRRSGIVGLTKEEIYQSVCNSEVSSSGYD 266 (313)
Q Consensus 229 ~~~~El~~~~k~gG~lvysTcs~~~p~Ene~vv~~~~~ 266 (313)
| ||+|+|+||| ++|+|||+++...++
T Consensus 381 p-----------GG~lvy~tcs-~~~~ene~~v~~~l~ 406 (450)
T 2yxl_A 381 P-----------GGRLLYTTCS-IFKEENEKNIRWFLN 406 (450)
T ss_dssp E-----------EEEEEEEESC-CCGGGTHHHHHHHHH
T ss_pred C-----------CcEEEEEeCC-CChhhHHHHHHHHHH
Confidence 5 9999999999 999999999965544
No 6
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=100.00 E-value=7.4e-39 Score=309.74 Aligned_cols=236 Identities=19% Similarity=0.238 Sum_probs=203.8
Q ss_pred cccCCCChHHHHH-HHHHcCCChh-hhh-hcCCCCeEEEecC---ChHHHHHHHHHhcCCceEEeccCCCcEEeCCCCCC
Q 021397 8 EISKLPLPEAFLD-FLKENGLDPS-VYS-AADSTPRYIRLKT---GNEADLEEIEAELKCKLEKVVWLSGFYSLPPDIKI 81 (313)
Q Consensus 8 ~~~~ys~P~w~~~-~~~~~g~~~~-~~~-~~~~~~~~~Rvn~---~~~~~~~~L~~~~g~~~~~~~~~~~~~~l~~~~~~ 81 (313)
++ +||+|+|+++ |.+.+|.+.. ++. .+.++|+++|+|+ +.+++.+.|.++ |+.+++.+|+|+++.+.....+
T Consensus 140 ~~-~~~~p~w~~~~~~~~~g~~~~~~~~~~~~~~~~~~Rvn~~~~~~~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~~ 217 (429)
T 1sqg_A 140 DA-RYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEA-GMKGFPHADYPDAVRLETPAPV 217 (429)
T ss_dssp GG-GGCSCHHHHHHHHHHCTTTHHHHHHHHTSCCCEEEEECTTTCCHHHHHHHHHHT-TCCEECCTTCTTEEEESSCCCG
T ss_pred hh-hhcCcHHHHHHHHHHhhHHHHHHHHhCCCCCCeEEEEcCCCCCHHHHHHHHHhC-CCceeecCCCCCEEEECCCCCc
Confidence 45 8999999999 8888995432 443 4588999999997 467788888876 9999999999999999876778
Q ss_pred cccccccCCeEEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCC
Q 021397 82 ATSMAYKQGKIYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALG 161 (313)
Q Consensus 82 ~~~~~~~~G~~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~ 161 (313)
..+++|..|.+++||.+|++++.++++++|++|||+|||||++|.++++.+++ +.|+|+|+++.+++.++++++++|+
T Consensus 218 ~~~~~~~~G~~~~qd~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~-~~v~a~D~~~~~l~~~~~~~~~~g~- 295 (429)
T 1sqg_A 218 HALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGM- 295 (429)
T ss_dssp GGSTTGGGTSEEECCHHHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTT-CEEEEEESSTTTHHHHHHHHHHTTC-
T ss_pred ccChHHhCCCeEeeCHHHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHHcCC-
Confidence 99999999999999999999999999999999999999999999999999865 8999999999999999999999998
Q ss_pred CcEEEEecCCC---------CCCccccc-cccCcccccccccccccccccccccchhHHHHHHHHHHHHHhhhhhccccC
Q 021397 162 DRCRLFVADGT---------TFSLAPLR-LLLDPGSCNSVLQEKDDTFREWTSRIPWKERKRAVKARENAASKAIVRSEH 231 (313)
Q Consensus 162 ~~v~~~~~D~~---------~~d~v~~D-~~l~~~s~sg~l~~~p~~~~~w~~~~~~~~~~~~~q~~~l~~~~~~~r~~~ 231 (313)
+++++++|+. .||.+++| || +++|+++++|++ .|.....+.......|..++..+.++++|
T Consensus 296 -~~~~~~~D~~~~~~~~~~~~fD~Vl~D~Pc----sg~g~~~~~p~~--~~~~~~~~~~~l~~~q~~~L~~a~~~Lkp-- 366 (429)
T 1sqg_A 296 -KATVKQGDGRYPSQWCGEQQFDRILLDAPC----SATGVIRRHPDI--KWLRRDRDIPELAQLQSEILDAIWPHLKT-- 366 (429)
T ss_dssp -CCEEEECCTTCTHHHHTTCCEEEEEEECCC----CCGGGTTTCTTH--HHHCCTTHHHHHHHHHHHHHHHHGGGEEE--
T ss_pred -CeEEEeCchhhchhhcccCCCCEEEEeCCC----CcccccCCCcch--hhcCCHHHHHHHHHHHHHHHHHHHHhcCC--
Confidence 4789999984 35667777 77 888999999998 45555555666678899999998888866
Q ss_pred cceeEeecCCcEEEEEcCCCCCcccchhhhhhccc
Q 021397 232 PELIFYGRRSGIVGLTKEEIYQSVCNSEVSSSGYD 266 (313)
Q Consensus 232 ~El~~~~k~gG~lvysTcs~~~p~Ene~vv~~~~~ 266 (313)
||+|+|+||| ++|+|||+++...++
T Consensus 367 ---------GG~lvystcs-~~~~ene~~v~~~l~ 391 (429)
T 1sqg_A 367 ---------GGTLVYATCS-VLPEENSLQIKAFLQ 391 (429)
T ss_dssp ---------EEEEEEEESC-CCGGGTHHHHHHHHH
T ss_pred ---------CCEEEEEECC-CChhhHHHHHHHHHH
Confidence 9999999999 999999999865544
No 7
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=100.00 E-value=1.8e-38 Score=294.37 Aligned_cols=214 Identities=18% Similarity=0.237 Sum_probs=167.4
Q ss_pred cCCCCeEEEecC---ChHHHHHHHHHhcCCceEEecc------------------CCCcEEeCCCCCCcccccccCCeEE
Q 021397 35 ADSTPRYIRLKT---GNEADLEEIEAELKCKLEKVVW------------------LSGFYSLPPDIKIATSMAYKQGKIY 93 (313)
Q Consensus 35 ~~~~~~~~Rvn~---~~~~~~~~L~~~~g~~~~~~~~------------------~~~~~~l~~~~~~~~~~~~~~G~~~ 93 (313)
..++|+++|||+ +++++++.|+++ |+.+++.+| +|+++.++....+..+++|++|+++
T Consensus 7 ~~~~p~~lRvN~lk~~~~~~~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~G~~~ 85 (309)
T 2b9e_A 7 ASQLPRFVRVNTLKTCSDDVVDYFKRQ-GFSYQGRASSLDDLRALKGKHFLLDPLMPELLVFPAQTDLHEHPLYRAGHLI 85 (309)
T ss_dssp --CCCEEEEECTTTCCHHHHHHHHHHT-TCEEEEECSSHHHHHTCCTTEEEECSSSTTEEEECTTCCCTTSHHHHTTSEE
T ss_pred CCCCCeEEEEeCCCCCHHHHHHHHHhC-CCeeeeccccccccccccccccccccCCCceEEeCCCCCcccChHHHCCeEE
Confidence 367899999996 567888888876 998888744 4677777765678999999999999
Q ss_pred EecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 021397 94 GIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT 173 (313)
Q Consensus 94 ~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~ 173 (313)
+||.+|++++.++++++|++|||+|||||+||+++++.+++.+.|+|+|+++.|++.+++|++++|+. +++++++|+..
T Consensus 86 ~Qd~~s~l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~-~v~~~~~D~~~ 164 (309)
T 2b9e_A 86 LQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVS-CCELAEEDFLA 164 (309)
T ss_dssp ECCTGGGHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGG
T ss_pred EECHHHHHHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEeCChHh
Confidence 99999999999999999999999999999999999999977799999999999999999999999996 79999999743
Q ss_pred ----------CCccccc-cccCcccccccccccccccccccccchhHHHHHHHHHHHHHhhhhhccccCcceeEeecCCc
Q 021397 174 ----------FSLAPLR-LLLDPGSCNSVLQEKDDTFREWTSRIPWKERKRAVKARENAASKAIVRSEHPELIFYGRRSG 242 (313)
Q Consensus 174 ----------~d~v~~D-~~l~~~s~sg~l~~~p~~~~~w~~~~~~~~~~~~~q~~~l~~~~~~~r~~~~El~~~~k~gG 242 (313)
||.|++| || |++|+++++|+....+.....+......+|.+++.++.+++ + ||
T Consensus 165 ~~~~~~~~~~fD~Vl~D~Pc----Sg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l-----------~-gG 228 (309)
T 2b9e_A 165 VSPSDPRYHEVHYILLDPSC----SGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFP-----------S-LQ 228 (309)
T ss_dssp SCTTCGGGTTEEEEEECCCC----CC------------------CCHHHHHHHHHHHHHHHTTCT-----------T-CC
T ss_pred cCccccccCCCCEEEEcCCc----CCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhcc-----------C-CC
Confidence 4567777 77 88899999998622111123344556788899888887754 3 89
Q ss_pred EEEEEcCCCCCcccchhhhhhcccc
Q 021397 243 IVGLTKEEIYQSVCNSEVSSSGYDK 267 (313)
Q Consensus 243 ~lvysTcs~~~p~Ene~vv~~~~~~ 267 (313)
+||||||| ++|+|||++|.+.+.+
T Consensus 229 ~lvYsTCs-~~~~Ene~~v~~~l~~ 252 (309)
T 2b9e_A 229 RLVYSTCS-LCQEENEDVVRDALQQ 252 (309)
T ss_dssp EEEEEESC-CCGGGTHHHHHHHHTT
T ss_pred EEEEECCC-CChHHhHHHHHHHHHh
Confidence 99999999 9999999999766554
No 8
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=100.00 E-value=1.3e-36 Score=286.47 Aligned_cols=171 Identities=24% Similarity=0.304 Sum_probs=144.0
Q ss_pred CCCCcccccccCCe-----EEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHH
Q 021397 78 DIKIATSMAYKQGK-----IYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACR 152 (313)
Q Consensus 78 ~~~~~~~~~~~~G~-----~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~ 152 (313)
.+.+..++.|.+|. ||+||.+||+++.+|+++||++|||+||||||||++|++.++ .+.|+|+|+++.|++.++
T Consensus 111 ~g~~~~~p~~~~g~~~vqd~~iQd~aS~l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~-~~~l~A~D~~~~R~~~l~ 189 (359)
T 4fzv_A 111 RGDISRFPPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGC-CRNLAANDLSPSRIARLQ 189 (359)
T ss_dssp TTCCCCCCCCCBCTTSSBSEEEECGGGHHHHHHHCCCTTEEEEESSCTTCHHHHHHHHTTC-EEEEEEECSCHHHHHHHH
T ss_pred CCChhcCCCcccCceeccchhhhCHHHHHHHHHhCCCCCCEEEEecCCccHHHHHHHHhcC-CCcEEEEcCCHHHHHHHH
Confidence 34577778777665 788889999999999999999999999999999999999764 478999999999999999
Q ss_pred HHHHHcCCC-----CcEEEEecCCC--------CCCccccc-cccCccccc--ccccccccccccccccchhHHHHHHHH
Q 021397 153 TLLQKYALG-----DRCRLFVADGT--------TFSLAPLR-LLLDPGSCN--SVLQEKDDTFREWTSRIPWKERKRAVK 216 (313)
Q Consensus 153 ~~~~~~g~~-----~~v~~~~~D~~--------~~d~v~~D-~~l~~~s~s--g~l~~~p~~~~~w~~~~~~~~~~~~~q 216 (313)
+|++++|.. .++.++..|++ .||.|++| || |++ |+++++|++...|++ .+......+|
T Consensus 190 ~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD~VLlDaPC----Sg~g~g~~r~~~~~~~~~~~--~~~~~l~~lQ 263 (359)
T 4fzv_A 190 KILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRVLVDVPC----TTDRHSLHEEENNIFKRSRK--KERQILPVLQ 263 (359)
T ss_dssp HHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEEEEEEECCC----CCHHHHTTCCTTCTTSGGGH--HHHHTHHHHH
T ss_pred HHHHHhhhhhhccCCceEEEeCchhhcchhccccCCEEEECCcc----CCCCCcccccChhhhhhCCH--HHHHHHHHHH
Confidence 999999763 46899999985 36677777 77 775 577888998655543 4445567889
Q ss_pred HHHHHhhhhhccccCcceeEeecCCcEEEEEcCCCCCcccchhhhhhcccc
Q 021397 217 ARENAASKAIVRSEHPELIFYGRRSGIVGLTKEEIYQSVCNSEVSSSGYDK 267 (313)
Q Consensus 217 ~~~l~~~~~~~r~~~~El~~~~k~gG~lvysTcs~~~p~Ene~vv~~~~~~ 267 (313)
.++|.++.++++| ||+||||||| ++|+|||+||...+++
T Consensus 264 ~~iL~~a~~~lkp-----------GG~LVYsTCS-l~~~ENE~vV~~~L~~ 302 (359)
T 4fzv_A 264 VQLLAAGLLATKP-----------GGHVVYSTCS-LSHLQNEYVVQGAIEL 302 (359)
T ss_dssp HHHHHHHHHTEEE-----------EEEEEEEESC-CCTTTTHHHHHHHHHH
T ss_pred HHHHHHHHhcCCC-----------CcEEEEEeCC-CchhhCHHHHHHHHHh
Confidence 9999999998866 9999999999 9999999999766653
No 9
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=100.00 E-value=4.3e-34 Score=260.63 Aligned_cols=207 Identities=18% Similarity=0.226 Sum_probs=163.8
Q ss_pred cCCCCeEEEecC---ChHHHHHHHHHhcCCceEEeccCCCcEEe-CCCCCCcccccccCCeEEEecHHHHHHHHhcCCCC
Q 021397 35 ADSTPRYIRLKT---GNEADLEEIEAELKCKLEKVVWLSGFYSL-PPDIKIATSMAYKQGKIYGIDAASGAAVSALNISA 110 (313)
Q Consensus 35 ~~~~~~~~Rvn~---~~~~~~~~L~~~~g~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~G~~~~Qd~ss~~~~~~l~~~~ 110 (313)
..++|+++|+|+ +++++.+.|++. |+.+++ +|.|+++.+ ..+..+..++.|..|++++||.+|++++.++++++
T Consensus 6 ~~~~~~~~rvn~~~~~~~~~~~~l~~~-g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~~qd~~s~l~~~~l~~~~ 83 (274)
T 3ajd_A 6 KGEKMQFIRVNTLKINPEVLKKRLENK-GVVLEK-TFLDYAFEVKKSPFSIGSTPEYLFGYYMPQSISSMIPPIVLNPRE 83 (274)
T ss_dssp ---CCEEEEECTTTCCHHHHHHHHHTT-TCEEEE-CSSTTEEEEEECSSCTTSSHHHHTTSEEECCSGGGHHHHHHCCCT
T ss_pred CCCCCeEEEEeCCCCCHHHHHHHHHHC-CCeecC-CCCCceEEEecCCCCcccChhhhCCeEEEeCHHHHHHHHHhCCCC
Confidence 367899999996 567788888876 999988 999999998 34456889999999999999999999999999999
Q ss_pred CCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCC-----------CCCcccc
Q 021397 111 GDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGT-----------TFSLAPL 179 (313)
Q Consensus 111 g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~-----------~~d~v~~ 179 (313)
|++|||+|||||++|.++++.+++.+.|+|+|+++.+++.+++|++++|+. +++++++|+. .||.+++
T Consensus 84 g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~~~~~~~~~fD~Vl~ 162 (274)
T 3ajd_A 84 DDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL-NTIIINADMRKYKDYLLKNEIFFDKILL 162 (274)
T ss_dssp TCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred cCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC-cEEEEeCChHhcchhhhhccccCCEEEE
Confidence 999999999999999999999876689999999999999999999999986 7999999974 3566777
Q ss_pred c-cccCcccccccccccccccccccccchhHHHHHHHHHHHHHhhhhhccccCcceeEeecCCcEEEEEcCCCCCcccch
Q 021397 180 R-LLLDPGSCNSVLQEKDDTFREWTSRIPWKERKRAVKARENAASKAIVRSEHPELIFYGRRSGIVGLTKEEIYQSVCNS 258 (313)
Q Consensus 180 D-~~l~~~s~sg~l~~~p~~~~~w~~~~~~~~~~~~~q~~~l~~~~~~~r~~~~El~~~~k~gG~lvysTcs~~~p~Ene 258 (313)
| || ++.|+++++| .|+.... ......|.+++..+.++++| ||+++|+||| ++++|||
T Consensus 163 d~Pc----s~~g~~~~~p----~~~~~~~--~~~~~~~~~~l~~~~~~Lkp-----------gG~lv~stcs-~~~~ene 220 (274)
T 3ajd_A 163 DAPC----SGNIIKDKNR----NVSEEDI--KYCSLRQKELIDIGIDLLKK-----------DGELVYSTCS-MEVEENE 220 (274)
T ss_dssp EECC----C----------------HHHH--TGGGTCHHHHHHHHHHHEEE-----------EEEEEEEESC-CCTTSSH
T ss_pred cCCC----CCCcccccCC----CCCHHHH--HHHHHHHHHHHHHHHHhCCC-----------CCEEEEEECC-CChHHhH
Confidence 7 66 7788898887 4543322 22234567777777777765 9999999999 9999999
Q ss_pred hhhhhccc
Q 021397 259 EVSSSGYD 266 (313)
Q Consensus 259 ~vv~~~~~ 266 (313)
++|.+.++
T Consensus 221 ~~v~~~l~ 228 (274)
T 3ajd_A 221 EVIKYILQ 228 (274)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99966554
No 10
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.61 E-value=1.8e-15 Score=144.33 Aligned_cols=138 Identities=14% Similarity=0.091 Sum_probs=105.5
Q ss_pred ccccccCCeEEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCC
Q 021397 83 TSMAYKQGKIYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGD 162 (313)
Q Consensus 83 ~~~~~~~G~~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~ 162 (313)
-..++++|+|+.|+.+..++...+ ++|++|||+|||+|++|+++++. + ..|+|+|+|+.+++.+++|++.+|+..
T Consensus 189 ~~~~~~tG~f~dqr~~r~~l~~~~--~~g~~VLDlg~GtG~~sl~~a~~-g--a~V~avDis~~al~~a~~n~~~ng~~~ 263 (393)
T 4dmg_A 189 LALAQKTGYYLDQRENRRLFEAMV--RPGERVLDVYSYVGGFALRAARK-G--AYALAVDKDLEALGVLDQAALRLGLRV 263 (393)
T ss_dssp TTTCCTTSSCGGGHHHHHHHHTTC--CTTCEEEEESCTTTHHHHHHHHT-T--CEEEEEESCHHHHHHHHHHHHHHTCCC
T ss_pred chhccccCcCCCHHHHHHHHHHHh--cCCCeEEEcccchhHHHHHHHHc-C--CeEEEEECCHHHHHHHHHHHHHhCCCC
Confidence 356789999999999998887664 47999999999999999999985 2 459999999999999999999999863
Q ss_pred cEEEEecCCCC--------CCccccc-cccCcccccccccccccccccccccchhHHHHHHHHHHHHHhhhhhccccCcc
Q 021397 163 RCRLFVADGTT--------FSLAPLR-LLLDPGSCNSVLQEKDDTFREWTSRIPWKERKRAVKARENAASKAIVRSEHPE 233 (313)
Q Consensus 163 ~v~~~~~D~~~--------~d~v~~D-~~l~~~s~sg~l~~~p~~~~~w~~~~~~~~~~~~~q~~~l~~~~~~~r~~~~E 233 (313)
.+.++|+.. ||.+.+| |+| .............+..++..+.++++|
T Consensus 264 --~~~~~D~~~~l~~~~~~fD~Ii~dpP~f-------------------~~~~~~~~~~~~~~~~ll~~a~~~Lkp---- 318 (393)
T 4dmg_A 264 --DIRHGEALPTLRGLEGPFHHVLLDPPTL-------------------VKRPEELPAMKRHLVDLVREALRLLAE---- 318 (393)
T ss_dssp --EEEESCHHHHHHTCCCCEEEEEECCCCC-------------------CSSGGGHHHHHHHHHHHHHHHHHTEEE----
T ss_pred --cEEEccHHHHHHHhcCCCCEEEECCCcC-------------------CCCHHHHHHHHHHHHHHHHHHHHhcCC----
Confidence 466888743 4555555 332 222222333445566677777777755
Q ss_pred eeEeecCCcEEEEEcCCCCCcccch
Q 021397 234 LIFYGRRSGIVGLTKEEIYQSVCNS 258 (313)
Q Consensus 234 l~~~~k~gG~lvysTcs~~~p~Ene 258 (313)
||+|+|+||| ..+.+++
T Consensus 319 -------GG~Lv~~s~s-~~~~~~~ 335 (393)
T 4dmg_A 319 -------EGFLWLSSCS-YHLRLED 335 (393)
T ss_dssp -------EEEEEEEECC-TTSCHHH
T ss_pred -------CCEEEEEECC-CCCCHHH
Confidence 9999999999 7776665
No 11
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.56 E-value=4e-14 Score=125.60 Aligned_cols=77 Identities=26% Similarity=0.301 Sum_probs=62.2
Q ss_pred ecHHHHHHHHhcC---CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 021397 95 IDAASGAAVSALN---ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADG 171 (313)
Q Consensus 95 Qd~ss~~~~~~l~---~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~ 171 (313)
|..-+..+...++ +++|++|||+|||||++|.++|+.+++.|+|+|+|+|+.|++.+.+.+++. .|+.++.+|+
T Consensus 58 ~skla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r---~nv~~i~~Da 134 (232)
T 3id6_C 58 RSKLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR---PNIFPLLADA 134 (232)
T ss_dssp TCHHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC---TTEEEEECCT
T ss_pred HHHHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc---CCeEEEEccc
Confidence 4444444444444 889999999999999999999999988899999999999987776666553 3799999999
Q ss_pred CCC
Q 021397 172 TTF 174 (313)
Q Consensus 172 ~~~ 174 (313)
+..
T Consensus 135 ~~~ 137 (232)
T 3id6_C 135 RFP 137 (232)
T ss_dssp TCG
T ss_pred ccc
Confidence 754
No 12
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.52 E-value=3.3e-13 Score=118.03 Aligned_cols=120 Identities=15% Similarity=0.164 Sum_probs=83.2
Q ss_pred CChHHHHHHHHHhcCCc-----------eEEeccCCCcEEeCCCCCCcccccccCCeEEEecHHH-HHHHHhcC--CCCC
Q 021397 46 TGNEADLEEIEAELKCK-----------LEKVVWLSGFYSLPPDIKIATSMAYKQGKIYGIDAAS-GAAVSALN--ISAG 111 (313)
Q Consensus 46 ~~~~~~~~~L~~~~g~~-----------~~~~~~~~~~~~l~~~~~~~~~~~~~~G~~~~Qd~ss-~~~~~~l~--~~~g 111 (313)
.+++++++.|++. |+. +.+..|.+.. .....+.+..+..+++++.. ..+...+. ++++
T Consensus 7 ~~~~~l~~~l~~~-g~~~~~~~~~a~~~~~r~~f~~~~-------~y~~~~~~~~~~~~~~~p~~~~~~l~~l~~~~~~~ 78 (226)
T 1i1n_A 7 ASHSELIHNLRKN-GIIKTDKVFEVMLATDRSHYAKCN-------PYMDSPQSIGFQATISAPHMHAYALELLFDQLHEG 78 (226)
T ss_dssp SSHHHHHHHHHHT-TSCCSHHHHHHHHTSCGGGTCSSC-------TTSSSCEEEETTEEECCHHHHHHHHHHTTTTSCTT
T ss_pred chHHHHHHHHHHc-CCcCCHHHHHHHHhCCHHHcCCCc-------cCCCCccccCCCceecCHHHHHHHHHHHHhhCCCC
Confidence 4567778888765 753 1112222221 12222333333345555552 23444554 7889
Q ss_pred CEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCC----CCcEEEEecCCCC
Q 021397 112 DHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYAL----GDRCRLFVADGTT 173 (313)
Q Consensus 112 ~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~----~~~v~~~~~D~~~ 173 (313)
.+|||+|||+|.++.++++.++..++|+++|+++.+++.+++++++.+. .+++.++.+|+..
T Consensus 79 ~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 144 (226)
T 1i1n_A 79 AKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRM 144 (226)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGG
T ss_pred CEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCccc
Confidence 9999999999999999999886667999999999999999999998764 2479999999864
No 13
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.49 E-value=1.1e-13 Score=131.87 Aligned_cols=138 Identities=16% Similarity=0.127 Sum_probs=100.4
Q ss_pred ccccCCeEEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcE
Q 021397 85 MAYKQGKIYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRC 164 (313)
Q Consensus 85 ~~~~~G~~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v 164 (313)
..+++|+|+.|.....++..++ ++|++|||+|||+|+++..+++. +..+|+|+|+|+.+++.+++|++.+|+.+++
T Consensus 194 ~~~~tg~f~~~~~~~~~~~~~~--~~~~~VLDl~~G~G~~~~~la~~--g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v 269 (396)
T 2as0_A 194 RGQKTGFFLDQRENRLALEKWV--QPGDRVLDVFTYTGGFAIHAAIA--GADEVIGIDKSPRAIETAKENAKLNGVEDRM 269 (396)
T ss_dssp SSSSSCCCSTTHHHHHHHGGGC--CTTCEEEETTCTTTHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCGGGE
T ss_pred cccccCccCCHHHHHHHHHHHh--hCCCeEEEecCCCCHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHHHHcCCCccc
Confidence 4567799988888877776553 57899999999999999999985 2468999999999999999999999986579
Q ss_pred EEEecCCC-----------CCCccccccccCcccccccccccccccccccccchhHHHHHHHHHHHHHhhhhhccccCcc
Q 021397 165 RLFVADGT-----------TFSLAPLRLLLDPGSCNSVLQEKDDTFREWTSRIPWKERKRAVKARENAASKAIVRSEHPE 233 (313)
Q Consensus 165 ~~~~~D~~-----------~~d~v~~D~~l~~~s~sg~l~~~p~~~~~w~~~~~~~~~~~~~q~~~l~~~~~~~r~~~~E 233 (313)
+++++|+. .||.+.+||. .|.............+..++..+.++++|
T Consensus 270 ~~~~~d~~~~~~~~~~~~~~fD~Vi~dpP------------------~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---- 327 (396)
T 2as0_A 270 KFIVGSAFEEMEKLQKKGEKFDIVVLDPP------------------AFVQHEKDLKAGLRAYFNVNFAGLNLVKD---- 327 (396)
T ss_dssp EEEESCHHHHHHHHHHTTCCEEEEEECCC------------------CSCSSGGGHHHHHHHHHHHHHHHHTTEEE----
T ss_pred eEEECCHHHHHHHHHhhCCCCCEEEECCC------------------CCCCCHHHHHHHHHHHHHHHHHHHHhcCC----
Confidence 99999974 3455555522 01111111222233444555666666654
Q ss_pred eeEeecCCcEEEEEcCCCCCccc
Q 021397 234 LIFYGRRSGIVGLTKEEIYQSVC 256 (313)
Q Consensus 234 l~~~~k~gG~lvysTcs~~~p~E 256 (313)
||+++|++|+ .+..+
T Consensus 328 -------gG~lv~~~~~-~~~~~ 342 (396)
T 2as0_A 328 -------GGILVTCSCS-QHVDL 342 (396)
T ss_dssp -------EEEEEEEECC-TTSCH
T ss_pred -------CcEEEEEECC-CCCCH
Confidence 9999999998 55433
No 14
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.49 E-value=7.6e-14 Score=132.50 Aligned_cols=136 Identities=16% Similarity=0.109 Sum_probs=101.8
Q ss_pred ccccccCCeEEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCC
Q 021397 83 TSMAYKQGKIYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGD 162 (313)
Q Consensus 83 ~~~~~~~G~~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~ 162 (313)
....+++|+|+.|...+.+++.+ +|++|||+|||+|+++..+++. ...|+|+|+|+.+++.+++|++.+|+.
T Consensus 186 ~~~~~~~g~f~~~~~~~~~~~~~----~~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~- 257 (382)
T 1wxx_A 186 LRAGQKTGAYLDQRENRLYMERF----RGERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLG- 257 (382)
T ss_dssp CSTTSCCCCCGGGHHHHHHGGGC----CEEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCT-
T ss_pred chhcccCccccchHHHHHHHHhc----CCCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCC-
Confidence 34567889999998887765544 7889999999999999999987 368999999999999999999999986
Q ss_pred cEEEEecCCC-----------CCCccccc-cccCcccccccccccccccccccccchhHHHHHHHHHHHHHhhhhhcccc
Q 021397 163 RCRLFVADGT-----------TFSLAPLR-LLLDPGSCNSVLQEKDDTFREWTSRIPWKERKRAVKARENAASKAIVRSE 230 (313)
Q Consensus 163 ~v~~~~~D~~-----------~~d~v~~D-~~l~~~s~sg~l~~~p~~~~~w~~~~~~~~~~~~~q~~~l~~~~~~~r~~ 230 (313)
+++++++|+. .||.+.+| |.+ .............+..++..+.++++|
T Consensus 258 ~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP~~-------------------~~~~~~~~~~~~~~~~~l~~~~~~Lkp- 317 (382)
T 1wxx_A 258 NVRVLEANAFDLLRRLEKEGERFDLVVLDPPAF-------------------AKGKKDVERAYRAYKEVNLRAIKLLKE- 317 (382)
T ss_dssp TEEEEESCHHHHHHHHHHTTCCEEEEEECCCCS-------------------CCSTTSHHHHHHHHHHHHHHHHHTEEE-
T ss_pred CceEEECCHHHHHHHHHhcCCCeeEEEECCCCC-------------------CCChhHHHHHHHHHHHHHHHHHHhcCC-
Confidence 5999999974 34555555 321 111112223334455566667777655
Q ss_pred CcceeEeecCCcEEEEEcCCCCCcccc
Q 021397 231 HPELIFYGRRSGIVGLTKEEIYQSVCN 257 (313)
Q Consensus 231 ~~El~~~~k~gG~lvysTcs~~~p~En 257 (313)
||++++++|+ .+..++
T Consensus 318 ----------gG~l~~~~~~-~~~~~~ 333 (382)
T 1wxx_A 318 ----------GGILATASCS-HHMTEP 333 (382)
T ss_dssp ----------EEEEEEEECC-TTSCHH
T ss_pred ----------CCEEEEEECC-CCCCHH
Confidence 9999999999 665554
No 15
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.48 E-value=1.7e-13 Score=139.54 Aligned_cols=142 Identities=16% Similarity=0.103 Sum_probs=105.3
Q ss_pred cccccCCeEEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-C
Q 021397 84 SMAYKQGKIYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALG-D 162 (313)
Q Consensus 84 ~~~~~~G~~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~-~ 162 (313)
...+++|+|..|+...+++.... +|.+|||+|||+|+++++++.. +..+|+++|+|+.+++.+++|++.+|+. +
T Consensus 516 ~~~~~tG~f~d~r~~r~~l~~~~---~g~~VLDlg~GtG~~sl~aa~~--ga~~V~aVD~s~~al~~a~~N~~~ngl~~~ 590 (703)
T 3v97_A 516 TDYLDTGLFLDHRIARRMLGQMS---KGKDFLNLFSYTGSATVHAGLG--GARSTTTVDMSRTYLEWAERNLRLNGLTGR 590 (703)
T ss_dssp SSSSSCSCCGGGHHHHHHHHHHC---TTCEEEEESCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCCST
T ss_pred cccccCCCcccHHHHHHHHHHhc---CCCcEEEeeechhHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHHHHcCCCcc
Confidence 46779999999999998887754 6899999999999999999873 3467999999999999999999999986 5
Q ss_pred cEEEEecCCC--------CCCccccc-cccCcccccccccccccccccccccchhHHHHHHHHHHHHHhhhhhccccCcc
Q 021397 163 RCRLFVADGT--------TFSLAPLR-LLLDPGSCNSVLQEKDDTFREWTSRIPWKERKRAVKARENAASKAIVRSEHPE 233 (313)
Q Consensus 163 ~v~~~~~D~~--------~~d~v~~D-~~l~~~s~sg~l~~~p~~~~~w~~~~~~~~~~~~~q~~~l~~~~~~~r~~~~E 233 (313)
+++++++|+. .||.|++| |+|.. .......| .....+..++..+.++++|
T Consensus 591 ~v~~i~~D~~~~l~~~~~~fD~Ii~DPP~f~~---------~~~~~~~~--------~~~~~~~~ll~~a~~~Lkp---- 649 (703)
T 3v97_A 591 AHRLIQADCLAWLREANEQFDLIFIDPPTFSN---------SKRMEDAF--------DVQRDHLALMKDLKRLLRA---- 649 (703)
T ss_dssp TEEEEESCHHHHHHHCCCCEEEEEECCCSBC----------------CC--------BHHHHHHHHHHHHHHHEEE----
T ss_pred ceEEEecCHHHHHHhcCCCccEEEECCccccC---------CccchhHH--------HHHHHHHHHHHHHHHhcCC----
Confidence 7999999974 46777777 45320 00000011 1223455566667777755
Q ss_pred eeEeecCCcEEEEEcCCCCCcccchh
Q 021397 234 LIFYGRRSGIVGLTKEEIYQSVCNSE 259 (313)
Q Consensus 234 l~~~~k~gG~lvysTcs~~~p~Ene~ 259 (313)
||+|++|+|+ -.-..+++
T Consensus 650 -------gG~L~~s~~~-~~~~~~~~ 667 (703)
T 3v97_A 650 -------GGTIMFSNNK-RGFRMDLD 667 (703)
T ss_dssp -------EEEEEEEECC-TTCCCCHH
T ss_pred -------CcEEEEEECC-cccccCHH
Confidence 9999999998 44444443
No 16
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.47 E-value=6.5e-14 Score=133.55 Aligned_cols=86 Identities=16% Similarity=0.088 Sum_probs=74.6
Q ss_pred cccccccCCeEEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCC-
Q 021397 82 ATSMAYKQGKIYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYAL- 160 (313)
Q Consensus 82 ~~~~~~~~G~~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~- 160 (313)
.....+++|+|..|....+++..+ .+|.+|||+|||+|++++++++. +...|+|+|+|+.+++.+++|++.+|+
T Consensus 195 ~~~~~~~tgff~~~~~~~~~l~~~---~~~~~VLDl~cG~G~~sl~la~~--g~~~V~~vD~s~~al~~a~~n~~~ngl~ 269 (396)
T 3c0k_A 195 DIQHGHKTGYYLDQRDSRLATRRY---VENKRVLNCFSYTGGFAVSALMG--GCSQVVSVDTSQEALDIARQNVELNKLD 269 (396)
T ss_dssp CTTTSSTTSSCGGGHHHHHHHHHH---CTTCEEEEESCTTCSHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCC
T ss_pred eccccccCCcCcCHHHHHHHHHHh---hCCCeEEEeeccCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCC
Confidence 344677889999999988887766 57899999999999999999984 236899999999999999999999998
Q ss_pred CCcEEEEecCCC
Q 021397 161 GDRCRLFVADGT 172 (313)
Q Consensus 161 ~~~v~~~~~D~~ 172 (313)
.++++++++|+.
T Consensus 270 ~~~v~~~~~D~~ 281 (396)
T 3c0k_A 270 LSKAEFVRDDVF 281 (396)
T ss_dssp GGGEEEEESCHH
T ss_pred ccceEEEECCHH
Confidence 657999999973
No 17
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.44 E-value=4.9e-13 Score=120.58 Aligned_cols=94 Identities=18% Similarity=0.200 Sum_probs=73.7
Q ss_pred ecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCC-CcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 021397 95 IDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGD-SGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT 173 (313)
Q Consensus 95 Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~-~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~ 173 (313)
++..+.++... ++||.+|||+|||+|..+..+++..+. +.+|+|+|+|+.|++.++++++..+...+|+++++|+..
T Consensus 57 ~~~i~~l~~~~--~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~ 134 (261)
T 4gek_A 57 ISMIGMLAERF--VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRD 134 (261)
T ss_dssp HHHHHHHHHHH--CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTT
T ss_pred HHHHHHHHHHh--CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccc
Confidence 44444555444 578999999999999999999987653 358999999999999999999998887789999999988
Q ss_pred CCccccccccCcccccccccc
Q 021397 174 FSLAPLRLLLDPGSCNSVLQE 194 (313)
Q Consensus 174 ~d~v~~D~~l~~~s~sg~l~~ 194 (313)
++...+|. +.+..++..
T Consensus 135 ~~~~~~d~----v~~~~~l~~ 151 (261)
T 4gek_A 135 IAIENASM----VVLNFTLQF 151 (261)
T ss_dssp CCCCSEEE----EEEESCGGG
T ss_pred cccccccc----ceeeeeeee
Confidence 77543342 255555543
No 18
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.41 E-value=5.5e-13 Score=126.79 Aligned_cols=134 Identities=15% Similarity=0.093 Sum_probs=97.0
Q ss_pred ccccccCCeEEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCC
Q 021397 83 TSMAYKQGKIYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGD 162 (313)
Q Consensus 83 ~~~~~~~G~~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~ 162 (313)
...++++|+|..|.....++...+ .+|.+|||+|||+|++++.+|+. +...|+++|+|+.+++.+++|++.+|+.+
T Consensus 187 ~~~~~~t~ff~~~~~~~~~~~~~~--~~~~~VLDl~cGtG~~sl~la~~--ga~~V~~vD~s~~al~~A~~N~~~n~~~~ 262 (385)
T 2b78_A 187 LNDGLMTGIFLDQRQVRNELINGS--AAGKTVLNLFSYTAAFSVAAAMG--GAMATTSVDLAKRSRALSLAHFEANHLDM 262 (385)
T ss_dssp SSSSSCCSSCGGGHHHHHHHHHTT--TBTCEEEEETCTTTHHHHHHHHT--TBSEEEEEESCTTHHHHHHHHHHHTTCCC
T ss_pred ccccccCCcCCcHHHHHHHHHHHh--cCCCeEEEEeeccCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCc
Confidence 345667799988888877777665 57899999999999999999974 23589999999999999999999999865
Q ss_pred -cEEEEecCCC-----------CCCccccc-cccCcccccccccccccccccccccchhHHHHHHHHHHHHHhhhhhccc
Q 021397 163 -RCRLFVADGT-----------TFSLAPLR-LLLDPGSCNSVLQEKDDTFREWTSRIPWKERKRAVKARENAASKAIVRS 229 (313)
Q Consensus 163 -~v~~~~~D~~-----------~~d~v~~D-~~l~~~s~sg~l~~~p~~~~~w~~~~~~~~~~~~~q~~~l~~~~~~~r~ 229 (313)
+++++++|+. .||.+.+| |.+.. ..+ ... .......+++..+.++++|
T Consensus 263 ~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~DPP~~~~--~~~---~~~--------------~~~~~~~~ll~~~~~~L~p 323 (385)
T 2b78_A 263 ANHQLVVMDVFDYFKYARRHHLTYDIIIIDPPSFAR--NKK---EVF--------------SVSKDYHKLIRQGLEILSE 323 (385)
T ss_dssp TTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCC----------CCC--------------CHHHHHHHHHHHHHHTEEE
T ss_pred cceEEEECCHHHHHHHHHHhCCCccEEEECCCCCCC--Chh---hHH--------------HHHHHHHHHHHHHHHhcCC
Confidence 7999999973 35666666 33110 000 001 1112233444555666654
Q ss_pred cCcceeEeecCCcEEEEEcCC
Q 021397 230 EHPELIFYGRRSGIVGLTKEE 250 (313)
Q Consensus 230 ~~~El~~~~k~gG~lvysTcs 250 (313)
||+|++++|+
T Consensus 324 -----------gG~l~~~~~~ 333 (385)
T 2b78_A 324 -----------NGLIIASTNA 333 (385)
T ss_dssp -----------EEEEEEEECC
T ss_pred -----------CcEEEEEeCC
Confidence 9999999998
No 19
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.40 E-value=7.5e-13 Score=115.69 Aligned_cols=82 Identities=13% Similarity=0.125 Sum_probs=72.2
Q ss_pred EEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 021397 92 IYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADG 171 (313)
Q Consensus 92 ~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~ 171 (313)
..+++..++++..++...++.+|||+|||+|..+..+++.+++.++|+++|+++.+++.+++++++.|+.++++++.+|+
T Consensus 40 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 119 (221)
T 3u81_A 40 MNVGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGAS 119 (221)
T ss_dssp GGCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCH
T ss_pred cccCHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCH
Confidence 45667777888777777788999999999999999999987656899999999999999999999999977799999997
Q ss_pred CC
Q 021397 172 TT 173 (313)
Q Consensus 172 ~~ 173 (313)
..
T Consensus 120 ~~ 121 (221)
T 3u81_A 120 QD 121 (221)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 20
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.39 E-value=5.4e-12 Score=109.30 Aligned_cols=76 Identities=14% Similarity=0.217 Sum_probs=66.7
Q ss_pred ecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 021397 95 IDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT 173 (313)
Q Consensus 95 Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~ 173 (313)
+......+...+++.++++|||+|||+|..+..+++. .++|+|+|+|+.+++.++++++++|+.++++++.+|+..
T Consensus 40 ~~~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 115 (204)
T 3njr_A 40 KSPMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPA 115 (204)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTG
T ss_pred cHHHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhh
Confidence 3344455667788999999999999999999999987 379999999999999999999999987579999999876
No 21
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.39 E-value=4.4e-12 Score=112.52 Aligned_cols=94 Identities=18% Similarity=0.264 Sum_probs=77.6
Q ss_pred HHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccc
Q 021397 99 SGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAP 178 (313)
Q Consensus 99 s~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~ 178 (313)
...+...+.+.++.+|||+|||+|..+..+++..+ ..|+|+|+|+.+++.++++++..|+.++++++.+|+..++.
T Consensus 25 ~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-- 100 (256)
T 1nkv_A 25 YATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHG--ITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-- 100 (256)
T ss_dssp HHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTC--CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC--
T ss_pred HHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcC--CeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc--
Confidence 34456677888999999999999999999998863 68999999999999999999999987689999999987653
Q ss_pred cccccCccccccccccccc
Q 021397 179 LRLLLDPGSCNSVLQEKDD 197 (313)
Q Consensus 179 ~D~~l~~~s~sg~l~~~p~ 197 (313)
+..||.+.|.+++.+.++
T Consensus 101 -~~~fD~V~~~~~~~~~~~ 118 (256)
T 1nkv_A 101 -NEKCDVAACVGATWIAGG 118 (256)
T ss_dssp -SSCEEEEEEESCGGGTSS
T ss_pred -CCCCCEEEECCChHhcCC
Confidence 555666677777655443
No 22
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.38 E-value=2.9e-12 Score=114.78 Aligned_cols=84 Identities=11% Similarity=0.141 Sum_probs=72.6
Q ss_pred CCeEEEecHH-------HHHHHHhcCCC-CCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q 021397 89 QGKIYGIDAA-------SGAAVSALNIS-AGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYAL 160 (313)
Q Consensus 89 ~G~~~~Qd~s-------s~~~~~~l~~~-~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~ 160 (313)
.++...|+.. +.+++.++.++ ++.+|||+|||+|..+..+++..+ +.|+|+|+++.+++.+++|++.+++
T Consensus 20 ~~~~i~q~~~~~~~~~d~~ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~--~~v~gvDi~~~~~~~a~~n~~~~~~ 97 (259)
T 3lpm_A 20 ENLRIIQSPSVFSFSIDAVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTK--AKIVGVEIQERLADMAKRSVAYNQL 97 (259)
T ss_dssp TTEEEEEBTTTBCCCHHHHHHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCC--CEEEEECCSHHHHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCCccCcHHHHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcC--CcEEEEECCHHHHHHHHHHHHHCCC
Confidence 4555556655 78888899888 999999999999999999998732 4999999999999999999999999
Q ss_pred CCcEEEEecCCCCC
Q 021397 161 GDRCRLFVADGTTF 174 (313)
Q Consensus 161 ~~~v~~~~~D~~~~ 174 (313)
.++++++++|+..+
T Consensus 98 ~~~v~~~~~D~~~~ 111 (259)
T 3lpm_A 98 EDQIEIIEYDLKKI 111 (259)
T ss_dssp TTTEEEECSCGGGG
T ss_pred cccEEEEECcHHHh
Confidence 87899999998643
No 23
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.35 E-value=1.3e-11 Score=106.13 Aligned_cols=81 Identities=15% Similarity=0.154 Sum_probs=69.7
Q ss_pred CeEEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEec
Q 021397 90 GKIYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVA 169 (313)
Q Consensus 90 G~~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~ 169 (313)
|.+ .++.....+...+.++++.+|||+|||+|..+..+++..+ .++|+|+|+|+.+++.+++++++.++ ++++++.+
T Consensus 21 g~~-~~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~ 97 (204)
T 3e05_A 21 KLI-TKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMP-NGRIFALERNPQYLGFIRDNLKKFVA-RNVTLVEA 97 (204)
T ss_dssp TTS-CCHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCT-TSEEEEEECCHHHHHHHHHHHHHHTC-TTEEEEEC
T ss_pred CcC-ChHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeC
Confidence 666 4555556667778899999999999999999999999853 47999999999999999999999998 47999999
Q ss_pred CCCC
Q 021397 170 DGTT 173 (313)
Q Consensus 170 D~~~ 173 (313)
|+..
T Consensus 98 d~~~ 101 (204)
T 3e05_A 98 FAPE 101 (204)
T ss_dssp CTTT
T ss_pred Chhh
Confidence 9854
No 24
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.34 E-value=3.4e-12 Score=111.25 Aligned_cols=80 Identities=11% Similarity=0.149 Sum_probs=69.7
Q ss_pred EecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 021397 94 GIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT 173 (313)
Q Consensus 94 ~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~ 173 (313)
++...++++..++...++.+|||+|||+|+.+..+++.+++.++|+++|+++.+++.+++++++.|+.++++++.+|+..
T Consensus 42 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 121 (223)
T 3duw_A 42 VSPTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALD 121 (223)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 44666777776666778899999999999999999998865689999999999999999999999997779999999843
No 25
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.33 E-value=3.7e-12 Score=112.82 Aligned_cols=67 Identities=25% Similarity=0.354 Sum_probs=60.2
Q ss_pred cCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 021397 106 LNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 106 l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d 175 (313)
+.++||++|||+|||+|..+.++|+..++.|+|+|+|+++.|++.+++++++.+ |+..+.+|+...+
T Consensus 73 l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~---ni~~V~~d~~~p~ 139 (233)
T 4df3_A 73 LPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRR---NIFPILGDARFPE 139 (233)
T ss_dssp CCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCT---TEEEEESCTTCGG
T ss_pred cCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhc---CeeEEEEeccCcc
Confidence 568999999999999999999999999999999999999999999998876543 7899999987643
No 26
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.32 E-value=1.5e-11 Score=112.27 Aligned_cols=123 Identities=13% Similarity=0.060 Sum_probs=91.7
Q ss_pred HHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccccc
Q 021397 101 AAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLR 180 (313)
Q Consensus 101 ~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D 180 (313)
.+...+.+++|.+|||+|||+|..+..+++..+ ..|+|+|+|+.+++.++++++..|+.++++++.+|+..+ +
T Consensus 63 ~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~ 135 (302)
T 3hem_A 63 LALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF-----D 135 (302)
T ss_dssp HHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC-----C
T ss_pred HHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc-----C
Confidence 456677889999999999999999999999875 689999999999999999999999977899999999776 4
Q ss_pred cccCcccccccccccccccccccccchhHHHHHHHHHHHHHhhhhhccccCcceeEeecCCcEEEEEcCC
Q 021397 181 LLLDPGSCNSVLQEKDDTFREWTSRIPWKERKRAVKARENAASKAIVRSEHPELIFYGRRSGIVGLTKEE 250 (313)
Q Consensus 181 ~~l~~~s~sg~l~~~p~~~~~w~~~~~~~~~~~~~q~~~l~~~~~~~r~~~~El~~~~k~gG~lvysTcs 250 (313)
..||.+.+.+++.+.|+.. ...... .....+....+++ ||||+++..+.+
T Consensus 136 ~~fD~v~~~~~~~~~~d~~---~~~~~~------~~~~~l~~~~~~L-----------kpgG~l~i~~~~ 185 (302)
T 3hem_A 136 EPVDRIVSLGAFEHFADGA---GDAGFE------RYDTFFKKFYNLT-----------PDDGRMLLHTIT 185 (302)
T ss_dssp CCCSEEEEESCGGGTTCCS---SCCCTT------HHHHHHHHHHHSS-----------CTTCEEEEEEEE
T ss_pred CCccEEEEcchHHhcCccc---cccchh------HHHHHHHHHHHhc-----------CCCcEEEEEEEe
Confidence 4455557777776665421 000000 0112223334444 559999998887
No 27
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.32 E-value=1.1e-11 Score=109.48 Aligned_cols=97 Identities=14% Similarity=0.196 Sum_probs=80.9
Q ss_pred EecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 021397 94 GIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT 173 (313)
Q Consensus 94 ~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~ 173 (313)
.|++++..++..++++++.+|||+|||+|..+..+++.. ..|+++|+|+.+++.++++++..++. ++.++.+|+..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~ 80 (239)
T 1xxl_A 5 HHHHSLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKGVE-NVRFQQGTAES 80 (239)
T ss_dssp -CHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHHTCC-SEEEEECBTTB
T ss_pred ccCCCcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEeccccc
Confidence 578899999999999999999999999999999998763 58999999999999999999999986 79999999987
Q ss_pred CCccccccccCcccccccccccc
Q 021397 174 FSLAPLRLLLDPGSCNSVLQEKD 196 (313)
Q Consensus 174 ~d~v~~D~~l~~~s~sg~l~~~p 196 (313)
+++ .+..||.+.|..++.+.+
T Consensus 81 ~~~--~~~~fD~v~~~~~l~~~~ 101 (239)
T 1xxl_A 81 LPF--PDDSFDIITCRYAAHHFS 101 (239)
T ss_dssp CCS--CTTCEEEEEEESCGGGCS
T ss_pred CCC--CCCcEEEEEECCchhhcc
Confidence 653 234555557766665444
No 28
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.32 E-value=2.1e-12 Score=115.18 Aligned_cols=80 Identities=11% Similarity=0.128 Sum_probs=70.2
Q ss_pred EecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 021397 94 GIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT 173 (313)
Q Consensus 94 ~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~ 173 (313)
++...+.++..++...++.+|||+|||+|..+..+++.+++.++|+++|+++.+++.+++++++.|+.++++++.+|+..
T Consensus 47 ~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 126 (248)
T 3tfw_A 47 VAANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQ 126 (248)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred cCHHHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 44666777776766778899999999999999999998875689999999999999999999999997789999999854
No 29
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.32 E-value=9.7e-12 Score=106.16 Aligned_cols=69 Identities=23% Similarity=0.418 Sum_probs=62.0
Q ss_pred CCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 021397 107 NISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 107 ~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d 175 (313)
.++++++|||+|||+|..+..+++..++.+.|+|+|+++.+++.++++++..|+.++++++++|+..++
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 87 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMD 87 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGG
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHh
Confidence 467899999999999999999999986567999999999999999999999998668999999986553
No 30
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.32 E-value=5.7e-12 Score=106.54 Aligned_cols=64 Identities=16% Similarity=0.259 Sum_probs=57.2
Q ss_pred CCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 107 NISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 107 ~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.+++|++|||+|||+|..+..+++. .++|+|+|+|+.+++.++++++..++ +++++++.|...+
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~~~~~l 82 (185)
T 3mti_A 19 VLDDESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGI-ENTELILDGHENL 82 (185)
T ss_dssp TCCTTCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTC-CCEEEEESCGGGG
T ss_pred hCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCcHHHH
Confidence 3578999999999999999999986 47999999999999999999999998 4799999777654
No 31
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.31 E-value=9.7e-12 Score=110.88 Aligned_cols=108 Identities=11% Similarity=0.179 Sum_probs=78.5
Q ss_pred cccccCCeEEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCc
Q 021397 84 SMAYKQGKIYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDR 163 (313)
Q Consensus 84 ~~~~~~G~~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~ 163 (313)
.++|.....+.|......+...+.+.++.+|||+|||+|..+..+++.. ..|+++|+|+.+++.++++++..++. +
T Consensus 11 ~~~~~~s~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~-~ 86 (260)
T 1vl5_A 11 HHMYVTSQIHAKGSDLAKLMQIAALKGNEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNGHQ-Q 86 (260)
T ss_dssp ------------CCCHHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTCC-S
T ss_pred ceeeecCccccCHHHHHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcCCC-c
Confidence 3566667777777777788888888999999999999999999998763 48999999999999999999999886 7
Q ss_pred EEEEecCCCCCCccccccccCccccccccccccc
Q 021397 164 CRLFVADGTTFSLAPLRLLLDPGSCNSVLQEKDD 197 (313)
Q Consensus 164 v~~~~~D~~~~d~v~~D~~l~~~s~sg~l~~~p~ 197 (313)
+.++.+|+..+++ .|..||.+.|..++.+.++
T Consensus 87 v~~~~~d~~~l~~--~~~~fD~V~~~~~l~~~~d 118 (260)
T 1vl5_A 87 VEYVQGDAEQMPF--TDERFHIVTCRIAAHHFPN 118 (260)
T ss_dssp EEEEECCC-CCCS--CTTCEEEEEEESCGGGCSC
T ss_pred eEEEEecHHhCCC--CCCCEEEEEEhhhhHhcCC
Confidence 9999999987663 2345565577766655443
No 32
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.31 E-value=1.1e-11 Score=112.05 Aligned_cols=92 Identities=14% Similarity=0.196 Sum_probs=64.9
Q ss_pred CcccccccCCeEEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHc-C
Q 021397 81 IATSMAYKQGKIYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKY-A 159 (313)
Q Consensus 81 ~~~~~~~~~G~~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~-g 159 (313)
......+..+...+++..+..++..++++++.+|||+|||+|..+..+++.+.+.++|+++|+++.+++.+++++++. |
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g 160 (275)
T 1yb2_A 81 MYFGRVIRRNTQIISEIDASYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYD 160 (275)
T ss_dssp GGHHHHC------------------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSC
T ss_pred HHHHhhccccccccChhhHHHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCC
Confidence 344456677777788888888888999999999999999999999999998655579999999999999999999988 8
Q ss_pred CCCcEEEEecCCCC
Q 021397 160 LGDRCRLFVADGTT 173 (313)
Q Consensus 160 ~~~~v~~~~~D~~~ 173 (313)
.. +++++.+|+..
T Consensus 161 ~~-~v~~~~~d~~~ 173 (275)
T 1yb2_A 161 IG-NVRTSRSDIAD 173 (275)
T ss_dssp CT-TEEEECSCTTT
T ss_pred CC-cEEEEECchhc
Confidence 64 79999999865
No 33
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.31 E-value=8.5e-12 Score=116.31 Aligned_cols=95 Identities=15% Similarity=0.070 Sum_probs=78.8
Q ss_pred ccccccCCeEEEecHHHHHHHHhcC-CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCC
Q 021397 83 TSMAYKQGKIYGIDAASGAAVSALN-ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALG 161 (313)
Q Consensus 83 ~~~~~~~G~~~~Qd~ss~~~~~~l~-~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~ 161 (313)
....++.|++..|......+...+. ..++.+|||+|||+|+.+..++.. + ..|+++|+|+.+++.+++|++.+++.
T Consensus 125 ~~~~~~tg~f~dq~~~~~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~--g-a~V~~VD~s~~al~~a~~n~~~~gl~ 201 (332)
T 2igt_A 125 FTAFRHVGVFPEQIVHWEWLKNAVETADRPLKVLNLFGYTGVASLVAAAA--G-AEVTHVDASKKAIGWAKENQVLAGLE 201 (332)
T ss_dssp CCSSSCCSCCGGGHHHHHHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHT--T-CEEEEECSCHHHHHHHHHHHHHHTCT
T ss_pred cCccccceechHHHHHHHHHHHHHHhcCCCCcEEEcccccCHHHHHHHHc--C-CEEEEEECCHHHHHHHHHHHHHcCCC
Confidence 3456788999999988777777664 457889999999999999999984 2 49999999999999999999999986
Q ss_pred C-cEEEEecCCC-----------CCCccccc
Q 021397 162 D-RCRLFVADGT-----------TFSLAPLR 180 (313)
Q Consensus 162 ~-~v~~~~~D~~-----------~~d~v~~D 180 (313)
+ +++++++|+. .||.+.+|
T Consensus 202 ~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~d 232 (332)
T 2igt_A 202 QAPIRWICEDAMKFIQREERRGSTYDIILTD 232 (332)
T ss_dssp TSCEEEECSCHHHHHHHHHHHTCCBSEEEEC
T ss_pred ccceEEEECcHHHHHHHHHhcCCCceEEEEC
Confidence 4 4999999973 36666666
No 34
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.30 E-value=2.4e-11 Score=111.66 Aligned_cols=95 Identities=15% Similarity=0.137 Sum_probs=76.2
Q ss_pred cHHHHHHHHhcC-CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 96 DAASGAAVSALN-ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 96 d~ss~~~~~~l~-~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
+.....+...+. ++++.+|||+|||+|..+..+++..+ ..|+|+|+|+.+++.++++++..|+.++++++.+|+..+
T Consensus 102 ~~~~~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 179 (312)
T 3vc1_A 102 SAQAEFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFG--SRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDT 179 (312)
T ss_dssp HHHHHHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC
T ss_pred HHHHHHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcC
Confidence 333444566676 78899999999999999999999863 689999999999999999999999877899999999876
Q ss_pred CccccccccCcccccccccc
Q 021397 175 SLAPLRLLLDPGSCNSVLQE 194 (313)
Q Consensus 175 d~v~~D~~l~~~s~sg~l~~ 194 (313)
++ .+..||.+.+..++.+
T Consensus 180 ~~--~~~~fD~V~~~~~l~~ 197 (312)
T 3vc1_A 180 PF--DKGAVTASWNNESTMY 197 (312)
T ss_dssp CC--CTTCEEEEEEESCGGG
T ss_pred CC--CCCCEeEEEECCchhh
Confidence 53 2345555566665543
No 35
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.30 E-value=1.5e-11 Score=102.76 Aligned_cols=81 Identities=14% Similarity=0.151 Sum_probs=65.6
Q ss_pred CCeEEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEe
Q 021397 89 QGKIYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFV 168 (313)
Q Consensus 89 ~G~~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~ 168 (313)
+|.+..++.. ..+...+.+.++.+|||+|||+|..+..+++..+ ..+|+++|+|+.+++.++++++..++.+++ ++.
T Consensus 5 ~g~~t~~~~~-~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~ 81 (178)
T 3hm2_A 5 DGQLTKQHVR-ALAISALAPKPHETLWDIGGGSGSIAIEWLRSTP-QTTAVCFEISEERRERILSNAINLGVSDRI-AVQ 81 (178)
T ss_dssp -CCSHHHHHH-HHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSS-SEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEE
T ss_pred CCcccHHHHH-HHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCC-CCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEe
Confidence 3454444433 4445566888999999999999999999998764 479999999999999999999999987578 888
Q ss_pred cCCC
Q 021397 169 ADGT 172 (313)
Q Consensus 169 ~D~~ 172 (313)
+|+.
T Consensus 82 ~d~~ 85 (178)
T 3hm2_A 82 QGAP 85 (178)
T ss_dssp CCTT
T ss_pred cchH
Confidence 8874
No 36
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.30 E-value=2.1e-11 Score=108.21 Aligned_cols=113 Identities=12% Similarity=0.217 Sum_probs=86.6
Q ss_pred CCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccccccccCcc
Q 021397 107 NISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLRLLLDPG 186 (313)
Q Consensus 107 ~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D~~l~~~ 186 (313)
.+.++.+|||+|||+|..+..+++..+ ++|+|+|+|+.+++.++++++..|+.++++++++|+..++. .+..||.+
T Consensus 43 ~~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~fD~v 118 (257)
T 3f4k_A 43 ELTDDAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPF--QNEELDLI 118 (257)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSS--CTTCEEEE
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCC--CCCCEEEE
Confidence 567889999999999999999999864 49999999999999999999999998779999999987663 23455655
Q ss_pred cccccccccccccccccccchhHHHHHHHHHHHHHhhhhhccccCcceeEeecCCcEEEEEcCCCCC
Q 021397 187 SCNSVLQEKDDTFREWTSRIPWKERKRAVKARENAASKAIVRSEHPELIFYGRRSGIVGLTKEEIYQ 253 (313)
Q Consensus 187 s~sg~l~~~p~~~~~w~~~~~~~~~~~~~q~~~l~~~~~~~r~~~~El~~~~k~gG~lvysTcs~~~ 253 (313)
.|.+++.+. +. ...+....+++ +|||+++.+++++..
T Consensus 119 ~~~~~l~~~-~~------------------~~~l~~~~~~L-----------~pgG~l~~~~~~~~~ 155 (257)
T 3f4k_A 119 WSEGAIYNI-GF------------------ERGMNEWSKYL-----------KKGGFIAVSEASWFT 155 (257)
T ss_dssp EEESCSCCC-CH------------------HHHHHHHHTTE-----------EEEEEEEEEEEEESS
T ss_pred EecChHhhc-CH------------------HHHHHHHHHHc-----------CCCcEEEEEEeeccC
Confidence 777766443 11 11223334444 559999999876333
No 37
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.30 E-value=5.8e-12 Score=111.61 Aligned_cols=82 Identities=15% Similarity=0.203 Sum_probs=70.1
Q ss_pred EEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 021397 92 IYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADG 171 (313)
Q Consensus 92 ~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~ 171 (313)
..++...++++..++...++.+|||+|||+|+.+..+++.+++.++|+++|+++.+++.+++++++.|+.++++++.+|+
T Consensus 52 ~~~~~~~~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda 131 (237)
T 3c3y_A 52 MSTSPLAGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDA 131 (237)
T ss_dssp GSCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCH
T ss_pred CCcCHHHHHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 33455666666666666678899999999999999999998766899999999999999999999999976899999998
Q ss_pred CC
Q 021397 172 TT 173 (313)
Q Consensus 172 ~~ 173 (313)
..
T Consensus 132 ~~ 133 (237)
T 3c3y_A 132 ML 133 (237)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 38
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.30 E-value=2.1e-11 Score=114.32 Aligned_cols=79 Identities=20% Similarity=0.231 Sum_probs=68.1
Q ss_pred ecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 95 IDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 95 Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
+..-+..+..++.++++.+|||+|||+|..+..++...++...|+|+|+++.+++.+++|+++.|+. +++++++|+..+
T Consensus 188 ~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~~~ 266 (354)
T 3tma_A 188 TPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADARHL 266 (354)
T ss_dssp CHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGGGG
T ss_pred CHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChhhC
Confidence 3334455666778889999999999999999999998744578999999999999999999999997 899999998764
No 39
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.30 E-value=4.4e-12 Score=111.51 Aligned_cols=86 Identities=13% Similarity=0.178 Sum_probs=76.1
Q ss_pred cCCeEEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEE
Q 021397 88 KQGKIYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLF 167 (313)
Q Consensus 88 ~~G~~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~ 167 (313)
..|...+|...+.++..++.+.++.+|||+|||+|..+..+++.++ .++|+++|+++.+++.+++++++.|+.+++.++
T Consensus 32 ~~~~~~~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~ 110 (233)
T 2gpy_A 32 EQQVPIMDLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALP-EATIVSIERDERRYEEAHKHVKALGLESRIELL 110 (233)
T ss_dssp HTTCCCCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEE
T ss_pred HcCCCCcCHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE
Confidence 3466678888888888888888899999999999999999999875 479999999999999999999999987679999
Q ss_pred ecCCCCC
Q 021397 168 VADGTTF 174 (313)
Q Consensus 168 ~~D~~~~ 174 (313)
.+|+..+
T Consensus 111 ~~d~~~~ 117 (233)
T 2gpy_A 111 FGDALQL 117 (233)
T ss_dssp CSCGGGS
T ss_pred ECCHHHH
Confidence 9998653
No 40
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.30 E-value=2.4e-11 Score=105.26 Aligned_cols=119 Identities=14% Similarity=0.195 Sum_probs=90.8
Q ss_pred HHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCcccc
Q 021397 100 GAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPL 179 (313)
Q Consensus 100 ~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~ 179 (313)
..+...+.+.++.+|||+|||+|..+..+++..+....|+++|+|+.+++.+++++...++. +++++.+|+..++. .
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~--~ 103 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK-NVEVLKSEENKIPL--P 103 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECBTTBCSS--C
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEecccccCCC--C
Confidence 34556677889999999999999999999998755579999999999999999999999986 79999999987653 2
Q ss_pred ccccCcccccccccccccccccccccchhHHHHHHHHHHHHHhhhhhccccCcceeEeecCCcEEEEEcCC
Q 021397 180 RLLLDPGSCNSVLQEKDDTFREWTSRIPWKERKRAVKARENAASKAIVRSEHPELIFYGRRSGIVGLTKEE 250 (313)
Q Consensus 180 D~~l~~~s~sg~l~~~p~~~~~w~~~~~~~~~~~~~q~~~l~~~~~~~r~~~~El~~~~k~gG~lvysTcs 250 (313)
+..||.+.+.+++.+.++. ...+....+++ +|||.++.+++.
T Consensus 104 ~~~fD~v~~~~~l~~~~~~------------------~~~l~~~~~~L-----------kpgG~l~i~~~~ 145 (219)
T 3dh0_A 104 DNTVDFIFMAFTFHELSEP------------------LKFLEELKRVA-----------KPFAYLAIIDWK 145 (219)
T ss_dssp SSCEEEEEEESCGGGCSSH------------------HHHHHHHHHHE-----------EEEEEEEEEEEC
T ss_pred CCCeeEEEeehhhhhcCCH------------------HHHHHHHHHHh-----------CCCeEEEEEEec
Confidence 3445555677666544331 12223334444 559999998876
No 41
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.30 E-value=8e-13 Score=117.73 Aligned_cols=83 Identities=11% Similarity=0.111 Sum_probs=73.2
Q ss_pred eEEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecC
Q 021397 91 KIYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVAD 170 (313)
Q Consensus 91 ~~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D 170 (313)
.+.++...++++..++...++.+|||+|||+|..|..+++.++..++|+++|+++.+++.+++++++.|+.++|+++.+|
T Consensus 41 ~~~i~~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd 120 (242)
T 3r3h_A 41 NMQVAPEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGP 120 (242)
T ss_dssp GTSCCHHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESC
T ss_pred CCccCHHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC
Confidence 35566777888877777778899999999999999999998876689999999999999999999999997789999999
Q ss_pred CCC
Q 021397 171 GTT 173 (313)
Q Consensus 171 ~~~ 173 (313)
+..
T Consensus 121 a~~ 123 (242)
T 3r3h_A 121 ALD 123 (242)
T ss_dssp HHH
T ss_pred HHH
Confidence 854
No 42
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.29 E-value=9.8e-12 Score=113.67 Aligned_cols=70 Identities=13% Similarity=0.186 Sum_probs=60.5
Q ss_pred HhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 021397 104 SALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 104 ~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d 175 (313)
.++++++|++|||+|||||+.|..++.... +++|+|+|+|+.|++.+++++++.|+ ++++++++|+..++
T Consensus 116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~~-ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~ 185 (298)
T 3fpf_A 116 ALGRFRRGERAVFIGGGPLPLTGILLSHVY-GMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVID 185 (298)
T ss_dssp HHTTCCTTCEEEEECCCSSCHHHHHHHHTT-CCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGG
T ss_pred HHcCCCCcCEEEEECCCccHHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCC
Confidence 467899999999999999998765544433 47999999999999999999999999 68999999998764
No 43
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.29 E-value=4.8e-12 Score=110.36 Aligned_cols=82 Identities=13% Similarity=0.167 Sum_probs=70.4
Q ss_pred EEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 021397 92 IYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADG 171 (313)
Q Consensus 92 ~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~ 171 (313)
..++...+.++..++...++.+|||+|||+|..+..+++.+++.++|+++|+++.+++.+++++++.|+.++++++++|+
T Consensus 46 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 125 (225)
T 3tr6_A 46 MQTAPEQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPA 125 (225)
T ss_dssp GSCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCH
T ss_pred cccCHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCH
Confidence 34555666777666666788999999999999999999987656899999999999999999999999977799999998
Q ss_pred CC
Q 021397 172 TT 173 (313)
Q Consensus 172 ~~ 173 (313)
..
T Consensus 126 ~~ 127 (225)
T 3tr6_A 126 KD 127 (225)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 44
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.29 E-value=2.9e-11 Score=108.29 Aligned_cols=115 Identities=14% Similarity=0.182 Sum_probs=87.0
Q ss_pred HHHhcC-CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccccc
Q 021397 102 AVSALN-ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLR 180 (313)
Q Consensus 102 ~~~~l~-~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D 180 (313)
+...+. +.++.+|||+|||+|..+..+++. ..+.|+|+|+|+.+++.++++++..|+.++++++.+|+..++. .+
T Consensus 37 ~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~ 112 (267)
T 3kkz_A 37 ALSFIDNLTEKSLIADIGCGTGGQTMVLAGH--VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPF--RN 112 (267)
T ss_dssp HHTTCCCCCTTCEEEEETCTTCHHHHHHHTT--CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCC--CT
T ss_pred HHHhcccCCCCCEEEEeCCCCCHHHHHHHhc--cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCC--CC
Confidence 344444 678999999999999999999987 3469999999999999999999999997789999999987663 23
Q ss_pred cccCcccccccccccccccccccccchhHHHHHHHHHHHHHhhhhhccccCcceeEeecCCcEEEEEcCC
Q 021397 181 LLLDPGSCNSVLQEKDDTFREWTSRIPWKERKRAVKARENAASKAIVRSEHPELIFYGRRSGIVGLTKEE 250 (313)
Q Consensus 181 ~~l~~~s~sg~l~~~p~~~~~w~~~~~~~~~~~~~q~~~l~~~~~~~r~~~~El~~~~k~gG~lvysTcs 250 (313)
..||.+.|.+++.+. +. ...+....+++ +|||+++.++.+
T Consensus 113 ~~fD~i~~~~~~~~~-~~------------------~~~l~~~~~~L-----------kpgG~l~~~~~~ 152 (267)
T 3kkz_A 113 EELDLIWSEGAIYNI-GF------------------ERGLNEWRKYL-----------KKGGYLAVSECS 152 (267)
T ss_dssp TCEEEEEESSCGGGT-CH------------------HHHHHHHGGGE-----------EEEEEEEEEEEE
T ss_pred CCEEEEEEcCCceec-CH------------------HHHHHHHHHHc-----------CCCCEEEEEEee
Confidence 455555777766443 11 11223334444 559999999987
No 45
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.29 E-value=3.7e-11 Score=107.64 Aligned_cols=119 Identities=18% Similarity=0.261 Sum_probs=91.0
Q ss_pred HHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccc
Q 021397 99 SGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAP 178 (313)
Q Consensus 99 s~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~ 178 (313)
...+...+.+.++.+|||+|||+|..+..+++.. ...|+++|+|+.+++.++++++..|+.+++.++.+|+..+++
T Consensus 50 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-- 125 (273)
T 3bus_A 50 TDEMIALLDVRSGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPF-- 125 (273)
T ss_dssp HHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCS--
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCC--
Confidence 3455667788899999999999999999999875 369999999999999999999999987789999999987653
Q ss_pred cccccCcccccccccccccccccccccchhHHHHHHHHHHHHHhhhhhccccCcceeEeecCCcEEEEEcCC
Q 021397 179 LRLLLDPGSCNSVLQEKDDTFREWTSRIPWKERKRAVKARENAASKAIVRSEHPELIFYGRRSGIVGLTKEE 250 (313)
Q Consensus 179 ~D~~l~~~s~sg~l~~~p~~~~~w~~~~~~~~~~~~~q~~~l~~~~~~~r~~~~El~~~~k~gG~lvysTcs 250 (313)
.+..||.+.+.+++.+.++. ...+....+++ +|||+++.++..
T Consensus 126 ~~~~fD~v~~~~~l~~~~~~------------------~~~l~~~~~~L-----------~pgG~l~i~~~~ 168 (273)
T 3bus_A 126 EDASFDAVWALESLHHMPDR------------------GRALREMARVL-----------RPGGTVAIADFV 168 (273)
T ss_dssp CTTCEEEEEEESCTTTSSCH------------------HHHHHHHHTTE-----------EEEEEEEEEEEE
T ss_pred CCCCccEEEEechhhhCCCH------------------HHHHHHHHHHc-----------CCCeEEEEEEee
Confidence 23455555777777655442 12223334444 559999988865
No 46
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.29 E-value=4.2e-11 Score=103.21 Aligned_cols=101 Identities=16% Similarity=0.133 Sum_probs=80.0
Q ss_pred cCCeEEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEE
Q 021397 88 KQGKIYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLF 167 (313)
Q Consensus 88 ~~G~~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~ 167 (313)
..|.+..+......+...++++++.+|||+|||+|..+..+++. .++|+++|+|+.+++.++++++++++. +++++
T Consensus 55 ~~~~~~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~ 130 (210)
T 3lbf_A 55 GQGQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL---VQHVCSVERIKGLQWQARRRLKNLDLH-NVSTR 130 (210)
T ss_dssp TTSCEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEE
T ss_pred CCCCEeCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCC-ceEEE
Confidence 34566667777777888889999999999999999999999987 379999999999999999999999986 79999
Q ss_pred ecCCCCCCccccccccCcccccccccc
Q 021397 168 VADGTTFSLAPLRLLLDPGSCNSVLQE 194 (313)
Q Consensus 168 ~~D~~~~d~v~~D~~l~~~s~sg~l~~ 194 (313)
.+|+..... .+..||.+.+.+.+.+
T Consensus 131 ~~d~~~~~~--~~~~~D~i~~~~~~~~ 155 (210)
T 3lbf_A 131 HGDGWQGWQ--ARAPFDAIIVTAAPPE 155 (210)
T ss_dssp ESCGGGCCG--GGCCEEEEEESSBCSS
T ss_pred ECCcccCCc--cCCCccEEEEccchhh
Confidence 999866432 1233444455554433
No 47
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.28 E-value=1.1e-11 Score=112.56 Aligned_cols=75 Identities=13% Similarity=0.086 Sum_probs=63.8
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 021397 97 AASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 97 ~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d 175 (313)
.....+... +++|++|||+|||+|+++..+++... .+|+|+|+|+.+++.+++|++.+++.++++++++|+..+.
T Consensus 114 ~~~~~l~~~--~~~~~~VLDlgcG~G~~~~~la~~~~--~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~ 188 (278)
T 2frn_A 114 KERVRMAKV--AKPDELVVDMFAGIGHLSLPIAVYGK--AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP 188 (278)
T ss_dssp HHHHHHHHH--CCTTCEEEETTCTTTTTHHHHHHHTC--CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC
T ss_pred HHHHHHHHh--CCCCCEEEEecccCCHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhc
Confidence 555555555 46799999999999999999998743 2799999999999999999999999767999999997654
No 48
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.28 E-value=3.7e-12 Score=111.93 Aligned_cols=79 Identities=14% Similarity=0.198 Sum_probs=65.1
Q ss_pred ecHHHHHHHHh---cCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CcEEEEecC
Q 021397 95 IDAASGAAVSA---LNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALG-DRCRLFVAD 170 (313)
Q Consensus 95 Qd~ss~~~~~~---l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~-~~v~~~~~D 170 (313)
+....+++..+ ..++++.+|||+|||+|..|..+++.+++.++|+++|+++.+++.+++++++.|+. ++++++.+|
T Consensus 38 ~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gd 117 (221)
T 3dr5_A 38 DEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSR 117 (221)
T ss_dssp CHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSC
T ss_pred CHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcC
Confidence 34444444333 34455569999999999999999998876789999999999999999999999987 689999999
Q ss_pred CCC
Q 021397 171 GTT 173 (313)
Q Consensus 171 ~~~ 173 (313)
+..
T Consensus 118 a~~ 120 (221)
T 3dr5_A 118 PLD 120 (221)
T ss_dssp HHH
T ss_pred HHH
Confidence 854
No 49
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.26 E-value=6.2e-11 Score=107.69 Aligned_cols=98 Identities=14% Similarity=0.036 Sum_probs=78.6
Q ss_pred cHHHHHHHHhc----CCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 021397 96 DAASGAAVSAL----NISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADG 171 (313)
Q Consensus 96 d~ss~~~~~~l----~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~ 171 (313)
......+...+ .+.++.+|||+|||+|..+..+++..+ ..|+++|+|+.+++.++++++..|+.++++++.+|+
T Consensus 64 ~~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~ 141 (297)
T 2o57_A 64 LRTDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFG--VSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSF 141 (297)
T ss_dssp HHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCT
T ss_pred HHHHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCc
Confidence 33344455566 788999999999999999999999864 589999999999999999999999877899999999
Q ss_pred CCCCccccccccCccccccccccccc
Q 021397 172 TTFSLAPLRLLLDPGSCNSVLQEKDD 197 (313)
Q Consensus 172 ~~~d~v~~D~~l~~~s~sg~l~~~p~ 197 (313)
..+++ .|..||.+.+.+++.+.++
T Consensus 142 ~~~~~--~~~~fD~v~~~~~l~~~~~ 165 (297)
T 2o57_A 142 LEIPC--EDNSYDFIWSQDAFLHSPD 165 (297)
T ss_dssp TSCSS--CTTCEEEEEEESCGGGCSC
T ss_pred ccCCC--CCCCEeEEEecchhhhcCC
Confidence 87653 2345565677777766554
No 50
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.24 E-value=1.6e-11 Score=109.58 Aligned_cols=83 Identities=8% Similarity=0.115 Sum_probs=71.8
Q ss_pred eEEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecC
Q 021397 91 KIYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVAD 170 (313)
Q Consensus 91 ~~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D 170 (313)
...++....+++..++...++.+|||+|||+|+.+..+++.+++.++|+++|+++.+++.+++++++.|+.++++++.+|
T Consensus 60 ~~~~~~~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gd 139 (247)
T 1sui_A 60 IMTTSADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGP 139 (247)
T ss_dssp GGSCCHHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESC
T ss_pred CCCcCHHHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECC
Confidence 44556677777777666677889999999999999999999875689999999999999999999999987689999999
Q ss_pred CCC
Q 021397 171 GTT 173 (313)
Q Consensus 171 ~~~ 173 (313)
+..
T Consensus 140 a~~ 142 (247)
T 1sui_A 140 ALP 142 (247)
T ss_dssp HHH
T ss_pred HHH
Confidence 854
No 51
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.24 E-value=3.5e-11 Score=106.97 Aligned_cols=85 Identities=18% Similarity=0.234 Sum_probs=72.5
Q ss_pred CCeEEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEe
Q 021397 89 QGKIYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFV 168 (313)
Q Consensus 89 ~G~~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~ 168 (313)
.+...+....+..+...+++.+|.+|||+|||+|..+..+++.+++.++|+++|+++.+++.++++++.+|+.++++++.
T Consensus 72 ~~~~~~~~~~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~ 151 (255)
T 3mb5_A 72 RGPQIVHPKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKL 151 (255)
T ss_dssp CCSCCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEEC
T ss_pred cccccccHhHHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEE
Confidence 33333344555677778899999999999999999999999997766899999999999999999999999876699999
Q ss_pred cCCCC
Q 021397 169 ADGTT 173 (313)
Q Consensus 169 ~D~~~ 173 (313)
+|+..
T Consensus 152 ~d~~~ 156 (255)
T 3mb5_A 152 KDIYE 156 (255)
T ss_dssp SCGGG
T ss_pred Cchhh
Confidence 99864
No 52
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.23 E-value=6.1e-11 Score=101.99 Aligned_cols=93 Identities=16% Similarity=0.195 Sum_probs=74.0
Q ss_pred HHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccc
Q 021397 99 SGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAP 178 (313)
Q Consensus 99 s~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~ 178 (313)
...+...+.++++ +|||+|||+|..+..+++. + ...|+++|+|+.+++.++++++..++.++++++++|+..++.
T Consensus 33 ~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~-~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-- 107 (219)
T 3dlc_A 33 AENIINRFGITAG-TCIDIGSGPGALSIALAKQ-S-DFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPI-- 107 (219)
T ss_dssp HHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHH-S-EEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSS--
T ss_pred HHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHc-C-CCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCC--
Confidence 3445556666777 9999999999999999987 3 369999999999999999999999987789999999987663
Q ss_pred cccccCcccccccccccc
Q 021397 179 LRLLLDPGSCNSVLQEKD 196 (313)
Q Consensus 179 ~D~~l~~~s~sg~l~~~p 196 (313)
.+..||.+.+.+++.+.+
T Consensus 108 ~~~~~D~v~~~~~l~~~~ 125 (219)
T 3dlc_A 108 EDNYADLIVSRGSVFFWE 125 (219)
T ss_dssp CTTCEEEEEEESCGGGCS
T ss_pred CcccccEEEECchHhhcc
Confidence 234455557777665543
No 53
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.23 E-value=5e-11 Score=107.70 Aligned_cols=90 Identities=14% Similarity=0.114 Sum_probs=69.6
Q ss_pred CCeEEEecHHHHHHHHhcCC--CCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEE
Q 021397 89 QGKIYGIDAASGAAVSALNI--SAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRL 166 (313)
Q Consensus 89 ~G~~~~Qd~ss~~~~~~l~~--~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~ 166 (313)
.|.+..+.....++..+++. .++.+|||+|||+|..+..+++..+ ...|+|+|+|+.+++.+++|++++++. ++++
T Consensus 86 ~~~~ipr~~te~l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~~-~~~v~~vD~s~~~l~~a~~n~~~~~~~-~v~~ 163 (276)
T 2b3t_A 86 PATLIPRPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERP-DCEIIAVDRMPDAVSLAQRNAQHLAIK-NIHI 163 (276)
T ss_dssp TTSCCCCTTHHHHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHCT-TSEEEEECSSHHHHHHHHHHHHHHTCC-SEEE
T ss_pred CCCcccCchHHHHHHHHHHhcccCCCEEEEecCCccHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCC-ceEE
Confidence 34444455555554444332 5788999999999999999998765 479999999999999999999999986 7999
Q ss_pred EecCCCC------CCccccc
Q 021397 167 FVADGTT------FSLAPLR 180 (313)
Q Consensus 167 ~~~D~~~------~d~v~~D 180 (313)
+++|+.. ||.+..+
T Consensus 164 ~~~d~~~~~~~~~fD~Iv~n 183 (276)
T 2b3t_A 164 LQSDWFSALAGQQFAMIVSN 183 (276)
T ss_dssp ECCSTTGGGTTCCEEEEEEC
T ss_pred EEcchhhhcccCCccEEEEC
Confidence 9999853 4555555
No 54
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.23 E-value=9.3e-11 Score=105.99 Aligned_cols=89 Identities=16% Similarity=0.194 Sum_probs=72.7
Q ss_pred HHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccccc
Q 021397 101 AAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLR 180 (313)
Q Consensus 101 ~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D 180 (313)
.+...+.+.++.+|||+|||+|..+..+++..+ ..|+++|+|+.+++.+++++++.|+.++++++.+|+..++
T Consensus 55 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~----- 127 (287)
T 1kpg_A 55 LALGKLGLQPGMTLLDVGCGWGATMMRAVEKYD--VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD----- 127 (287)
T ss_dssp HHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC-----
T ss_pred HHHHHcCCCCcCEEEEECCcccHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC-----
Confidence 345566788999999999999999999997764 4999999999999999999998888778999999997765
Q ss_pred cccCcccccccccccc
Q 021397 181 LLLDPGSCNSVLQEKD 196 (313)
Q Consensus 181 ~~l~~~s~sg~l~~~p 196 (313)
..||.+.+.+++.+.+
T Consensus 128 ~~fD~v~~~~~l~~~~ 143 (287)
T 1kpg_A 128 EPVDRIVSIGAFEHFG 143 (287)
T ss_dssp CCCSEEEEESCGGGTC
T ss_pred CCeeEEEEeCchhhcC
Confidence 2344446677766543
No 55
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.21 E-value=2.6e-11 Score=106.83 Aligned_cols=84 Identities=11% Similarity=0.093 Sum_probs=71.9
Q ss_pred CeEEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEec
Q 021397 90 GKIYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVA 169 (313)
Q Consensus 90 G~~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~ 169 (313)
+.-.++.....++..++...++.+|||+|||+|..+..+++..+ .++|+++|+++.+++.+++++++.++.++++++.+
T Consensus 51 ~~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~ 129 (232)
T 3ntv_A 51 EVPIVDRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASISD-DIHVTTIERNETMIQYAKQNLATYHFENQVRIIEG 129 (232)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTCT-TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEES
T ss_pred CCCCcCHHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC
Confidence 44455667777777777777889999999999999999998543 58999999999999999999999998778999999
Q ss_pred CCCCC
Q 021397 170 DGTTF 174 (313)
Q Consensus 170 D~~~~ 174 (313)
|+..+
T Consensus 130 d~~~~ 134 (232)
T 3ntv_A 130 NALEQ 134 (232)
T ss_dssp CGGGC
T ss_pred CHHHH
Confidence 98654
No 56
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.21 E-value=1.2e-10 Score=107.09 Aligned_cols=117 Identities=12% Similarity=0.173 Sum_probs=87.5
Q ss_pred HHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCcccc
Q 021397 100 GAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPL 179 (313)
Q Consensus 100 ~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~ 179 (313)
..+...+.+.++.+|||+|||+|..+..+++..+ ..|+++|+|+.+++.++++++..|+.++++++.+|+..++
T Consensus 80 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---- 153 (318)
T 2fk8_A 80 DLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFD--VNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA---- 153 (318)
T ss_dssp HHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC----
T ss_pred HHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC----
Confidence 3455567788999999999999999999998873 5999999999999999999999888767999999987765
Q ss_pred ccccCcccccccccccccccccccccchhHHHHHHHHHHHHHhhhhhccccCcceeEeecCCcEEEEEcCC
Q 021397 180 RLLLDPGSCNSVLQEKDDTFREWTSRIPWKERKRAVKARENAASKAIVRSEHPELIFYGRRSGIVGLTKEE 250 (313)
Q Consensus 180 D~~l~~~s~sg~l~~~p~~~~~w~~~~~~~~~~~~~q~~~l~~~~~~~r~~~~El~~~~k~gG~lvysTcs 250 (313)
..||.+.+.+++.+.++. . ....+....+++ +|||+++..+..
T Consensus 154 -~~fD~v~~~~~l~~~~~~--~--------------~~~~l~~~~~~L-----------kpgG~l~~~~~~ 196 (318)
T 2fk8_A 154 -EPVDRIVSIEAFEHFGHE--N--------------YDDFFKRCFNIM-----------PADGRMTVQSSV 196 (318)
T ss_dssp -CCCSEEEEESCGGGTCGG--G--------------HHHHHHHHHHHS-----------CTTCEEEEEEEE
T ss_pred -CCcCEEEEeChHHhcCHH--H--------------HHHHHHHHHHhc-----------CCCcEEEEEEec
Confidence 234444666666554320 0 111223334444 559999998887
No 57
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.20 E-value=1.8e-10 Score=106.27 Aligned_cols=97 Identities=12% Similarity=0.146 Sum_probs=76.2
Q ss_pred EecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 021397 94 GIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT 173 (313)
Q Consensus 94 ~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~ 173 (313)
.|......+...+++++|++|||+|||+|..+..+++..+..++|+++|+|+.+++.++++++..|+. +++++.+|+..
T Consensus 59 ~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~-~v~~~~~d~~~ 137 (317)
T 1dl5_A 59 SQPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIE-NVIFVCGDGYY 137 (317)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGG
T ss_pred cCHHHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEECChhh
Confidence 34455666777888999999999999999999999998764578999999999999999999999986 59999999876
Q ss_pred CCccccccccCccccccccc
Q 021397 174 FSLAPLRLLLDPGSCNSVLQ 193 (313)
Q Consensus 174 ~d~v~~D~~l~~~s~sg~l~ 193 (313)
... .+..||.+.+.+++.
T Consensus 138 ~~~--~~~~fD~Iv~~~~~~ 155 (317)
T 1dl5_A 138 GVP--EFSPYDVIFVTVGVD 155 (317)
T ss_dssp CCG--GGCCEEEEEECSBBS
T ss_pred ccc--cCCCeEEEEEcCCHH
Confidence 322 122344445555443
No 58
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.20 E-value=2.7e-12 Score=113.28 Aligned_cols=88 Identities=17% Similarity=0.126 Sum_probs=69.3
Q ss_pred CeEEEecH--HHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEE
Q 021397 90 GKIYGIDA--ASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLF 167 (313)
Q Consensus 90 G~~~~Qd~--ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~ 167 (313)
|++..+.. +..++..+....++.+|||+|||+|..+..+++. ...|+|+|+|+.+++.++++++.+++.++++++
T Consensus 56 ~~~~~~~~~~~~~l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~ 132 (241)
T 3gdh_A 56 GWFSVTPEKIAEHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALT---GMRVIAIDIDPVKIALARNNAEVYGIADKIEFI 132 (241)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHSCCSEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEE
T ss_pred ceeecCHHHHHHHHHHHhhhccCCCEEEECccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEE
Confidence 44444444 4444445555558999999999999999999985 279999999999999999999999985589999
Q ss_pred ecCCCC------CCccccc
Q 021397 168 VADGTT------FSLAPLR 180 (313)
Q Consensus 168 ~~D~~~------~d~v~~D 180 (313)
++|+.. ||.+.+|
T Consensus 133 ~~d~~~~~~~~~~D~v~~~ 151 (241)
T 3gdh_A 133 CGDFLLLASFLKADVVFLS 151 (241)
T ss_dssp ESCHHHHGGGCCCSEEEEC
T ss_pred ECChHHhcccCCCCEEEEC
Confidence 999853 5555555
No 59
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.19 E-value=6e-11 Score=107.52 Aligned_cols=97 Identities=20% Similarity=0.266 Sum_probs=76.5
Q ss_pred cHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 021397 96 DAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 96 d~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d 175 (313)
+..+.+...+..+.++.+|||+|||+|..+..+++..++...|+|+|+|+.+++.+++++...+. +++++++|+..++
T Consensus 8 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~ 85 (284)
T 3gu3_A 8 DYVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY--DSEFLEGDATEIE 85 (284)
T ss_dssp HHHHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS--EEEEEESCTTTCC
T ss_pred HHHHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcchhhcC
Confidence 34444454556778899999999999999999998876557999999999999999999988776 7999999998765
Q ss_pred ccccccccCccccccccccccc
Q 021397 176 LAPLRLLLDPGSCNSVLQEKDD 197 (313)
Q Consensus 176 ~v~~D~~l~~~s~sg~l~~~p~ 197 (313)
. +..||.+.+..++.+.++
T Consensus 86 ~---~~~fD~v~~~~~l~~~~~ 104 (284)
T 3gu3_A 86 L---NDKYDIAICHAFLLHMTT 104 (284)
T ss_dssp C---SSCEEEEEEESCGGGCSS
T ss_pred c---CCCeeEEEECChhhcCCC
Confidence 4 334555577776655443
No 60
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.18 E-value=1.5e-11 Score=116.93 Aligned_cols=84 Identities=11% Similarity=0.015 Sum_probs=66.8
Q ss_pred cCCeE-EEecHHHHHHH---HhcCC--CCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCC
Q 021397 88 KQGKI-YGIDAASGAAV---SALNI--SAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALG 161 (313)
Q Consensus 88 ~~G~~-~~Qd~ss~~~~---~~l~~--~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~ 161 (313)
..++| ..|.....+.. ..+.. ++|.+|||+|||+|++++.++..+++.+.|+++|+++.+++.+++|++.+|+.
T Consensus 24 ~~~Ffn~~~~~nR~l~~~~~~~~~~~~~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~ 103 (392)
T 3axs_A 24 MPVFYNPRMRVNRDLAVLGLEYLCKKLGRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIP 103 (392)
T ss_dssp CCSSCCGGGHHHHHHHHHHHHHHHHHHCSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCC
T ss_pred CCEEEcCCcHHHHHHHHHHHHHHhhccCCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCC
Confidence 44555 35666655542 22222 57899999999999999999997654468999999999999999999999997
Q ss_pred Cc-EEEEecCC
Q 021397 162 DR-CRLFVADG 171 (313)
Q Consensus 162 ~~-v~~~~~D~ 171 (313)
++ ++++++|+
T Consensus 104 ~~~v~v~~~Da 114 (392)
T 3axs_A 104 EDRYEIHGMEA 114 (392)
T ss_dssp GGGEEEECSCH
T ss_pred CceEEEEeCCH
Confidence 55 99999997
No 61
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.18 E-value=1.3e-10 Score=104.11 Aligned_cols=103 Identities=22% Similarity=0.224 Sum_probs=78.2
Q ss_pred ecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHH------HHHHHHHHHHHcCCCCcEEEEe
Q 021397 95 IDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARH------RLAACRTLLQKYALGDRCRLFV 168 (313)
Q Consensus 95 Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~------~l~~~~~~~~~~g~~~~v~~~~ 168 (313)
|......+...+.++++.+|||+|||+|..+..+++..+..++|+++|+|+. +++.++++++..++.++++++.
T Consensus 28 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~ 107 (275)
T 3bkx_A 28 QTAHRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHF 107 (275)
T ss_dssp HHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEEC
T ss_pred HHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEE
Confidence 4444455666778899999999999999999999998755579999999997 9999999999888766899999
Q ss_pred cC-CCCCCccccccccCccccccccccccc
Q 021397 169 AD-GTTFSLAPLRLLLDPGSCNSVLQEKDD 197 (313)
Q Consensus 169 ~D-~~~~d~v~~D~~l~~~s~sg~l~~~p~ 197 (313)
+| .........+..||.+.+.+++.+.++
T Consensus 108 ~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~ 137 (275)
T 3bkx_A 108 NTNLSDDLGPIADQHFDRVVLAHSLWYFAS 137 (275)
T ss_dssp SCCTTTCCGGGTTCCCSEEEEESCGGGSSC
T ss_pred CChhhhccCCCCCCCEEEEEEccchhhCCC
Confidence 98 222111112345666677777765544
No 62
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.18 E-value=3.7e-10 Score=97.59 Aligned_cols=84 Identities=20% Similarity=0.326 Sum_probs=71.1
Q ss_pred cCCeEEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEE
Q 021397 88 KQGKIYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLF 167 (313)
Q Consensus 88 ~~G~~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~ 167 (313)
..|....+......+...+.+.++.+|||+|||+|..+..+++..+..++|+++|+++.+++.+++++...++. +++++
T Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~ 133 (215)
T 2yxe_A 55 GYGQTISAIHMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYD-NVIVI 133 (215)
T ss_dssp ETTEEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCT-TEEEE
T ss_pred CCCcEeCcHHHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEE
Confidence 44555555555566777788899999999999999999999998855579999999999999999999999986 69999
Q ss_pred ecCCC
Q 021397 168 VADGT 172 (313)
Q Consensus 168 ~~D~~ 172 (313)
.+|+.
T Consensus 134 ~~d~~ 138 (215)
T 2yxe_A 134 VGDGT 138 (215)
T ss_dssp ESCGG
T ss_pred ECCcc
Confidence 99974
No 63
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.17 E-value=2.8e-11 Score=114.72 Aligned_cols=91 Identities=16% Similarity=0.063 Sum_probs=68.7
Q ss_pred CCeEE--EecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHc--------
Q 021397 89 QGKIY--GIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKY-------- 158 (313)
Q Consensus 89 ~G~~~--~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~-------- 158 (313)
.+.|+ .|.....+....+...+|.+|||+|||+|.+++.++...++ ..|+++|+++.+++.+++|++++
T Consensus 24 ~~~F~np~~~~nr~l~~~~l~~~~~~~VLDl~aGtG~~~l~~a~~~~~-~~V~avDi~~~av~~a~~N~~~n~~~~~~~~ 102 (378)
T 2dul_A 24 SPVFYNPRMALNRDIVVVLLNILNPKIVLDALSATGIRGIRFALETPA-EEVWLNDISEDAYELMKRNVMLNFDGELRES 102 (378)
T ss_dssp -CCCCCGGGHHHHHHHHHHHHHHCCSEEEESSCTTSHHHHHHHHHSSC-SEEEEEESCHHHHHHHHHHHHHHCCSCCEEC
T ss_pred CCceeCCchHHHHHHHHHHHHHcCCCEEEECCCchhHHHHHHHHhCCC-CeEEEEECCHHHHHHHHHHHHHhcccccccc
Confidence 34444 45555544333322237899999999999999999998754 57999999999999999999999
Q ss_pred -------CCCCcEEEEecCCC--------CCCcccccc
Q 021397 159 -------ALGDRCRLFVADGT--------TFSLAPLRL 181 (313)
Q Consensus 159 -------g~~~~v~~~~~D~~--------~~d~v~~D~ 181 (313)
|+. +++++++|+. .||.+.+||
T Consensus 103 ~~~~~~~gl~-~i~v~~~Da~~~~~~~~~~fD~I~lDP 139 (378)
T 2dul_A 103 KGRAILKGEK-TIVINHDDANRLMAERHRYFHFIDLDP 139 (378)
T ss_dssp SSEEEEESSS-EEEEEESCHHHHHHHSTTCEEEEEECC
T ss_pred cccccccCCC-ceEEEcCcHHHHHHhccCCCCEEEeCC
Confidence 885 5999999984 355555553
No 64
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.17 E-value=4.4e-11 Score=105.49 Aligned_cols=79 Identities=11% Similarity=0.113 Sum_probs=66.7
Q ss_pred EecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 021397 94 GIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGT 172 (313)
Q Consensus 94 ~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~ 172 (313)
++.....++..++...++.+|||+|||+|..+..+++.++..++|+++|+++.+++.+++++++.|+.++++++.+|+.
T Consensus 56 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~ 134 (232)
T 3cbg_A 56 ISPEQAQFLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPAL 134 (232)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH
T ss_pred cCHHHHHHHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHH
Confidence 3445555655555556788999999999999999999876568999999999999999999999998767999999974
No 65
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.17 E-value=2.7e-10 Score=96.66 Aligned_cols=88 Identities=16% Similarity=0.076 Sum_probs=71.5
Q ss_pred HHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccccc
Q 021397 101 AAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLR 180 (313)
Q Consensus 101 ~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D 180 (313)
.+...+...++.+|||+|||+|..+..+++. ...|+++|+|+.+++.++++++..++. +++++.+|+..++. +
T Consensus 23 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~---~ 95 (199)
T 2xvm_A 23 EVLEAVKVVKPGKTLDLGCGNGRNSLYLAAN---GYDVDAWDKNAMSIANVERIKSIENLD-NLHTRVVDLNNLTF---D 95 (199)
T ss_dssp HHHHHTTTSCSCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECCGGGCCC---C
T ss_pred HHHHHhhccCCCeEEEEcCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhCCCC-CcEEEEcchhhCCC---C
Confidence 4556677778899999999999999999986 368999999999999999999998885 69999999987653 4
Q ss_pred cccCccccccccccc
Q 021397 181 LLLDPGSCNSVLQEK 195 (313)
Q Consensus 181 ~~l~~~s~sg~l~~~ 195 (313)
..||.+.+.+++.+.
T Consensus 96 ~~~D~v~~~~~l~~~ 110 (199)
T 2xvm_A 96 RQYDFILSTVVLMFL 110 (199)
T ss_dssp CCEEEEEEESCGGGS
T ss_pred CCceEEEEcchhhhC
Confidence 445555666666543
No 66
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.17 E-value=5.4e-11 Score=103.90 Aligned_cols=78 Identities=13% Similarity=0.094 Sum_probs=66.1
Q ss_pred ecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 021397 95 IDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGT 172 (313)
Q Consensus 95 Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~ 172 (313)
......++..++...++.+|||+|||+|..+..+++.+++.++|+++|+++.+++.+++++++.|+.++++++.+|+.
T Consensus 54 ~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~ 131 (229)
T 2avd_A 54 TCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPAL 131 (229)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHH
Confidence 344445555555567789999999999999999999876568999999999999999999999998768999999974
No 67
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.17 E-value=1e-10 Score=99.35 Aligned_cols=63 Identities=24% Similarity=0.154 Sum_probs=55.6
Q ss_pred CCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 109 SAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 109 ~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.++.+|||+|||+|..+..+++. +..+|+|+|+|+.+++.+++|++.+++ ++++++++|+..+
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~ 105 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR--GAASVLFVESDQRSAAVIARNIEALGL-SGATLRRGAVAAV 105 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEECCHHHHHHHHHHHHHHTC-SCEEEEESCHHHH
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC--CCCeEEEEECCHHHHHHHHHHHHHcCC-CceEEEEccHHHH
Confidence 57899999999999999988774 346899999999999999999999998 4799999997543
No 68
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.17 E-value=3.5e-10 Score=98.76 Aligned_cols=63 Identities=16% Similarity=0.234 Sum_probs=56.9
Q ss_pred cCCCCCCEEEEECCC-cChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 021397 106 LNISAGDHVLDLCAA-PGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGT 172 (313)
Q Consensus 106 l~~~~g~~VLDlcag-pG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~ 172 (313)
..++++.+|||+||| +|..+..+++.. ...|+|+|+|+.+++.++++++.+++ +++++++|+.
T Consensus 51 ~~~~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~ 114 (230)
T 3evz_A 51 TFLRGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNS--NVRLVKSNGG 114 (230)
T ss_dssp TTCCSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTC--CCEEEECSSC
T ss_pred hhcCCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCC--CcEEEeCCch
Confidence 346789999999999 999999999986 37999999999999999999999998 6999999964
No 69
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.16 E-value=2.1e-11 Score=105.42 Aligned_cols=80 Identities=20% Similarity=0.111 Sum_probs=66.9
Q ss_pred EecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 021397 94 GIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT 173 (313)
Q Consensus 94 ~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~ 173 (313)
++...+.++..++...++.+|||+|||+|..+..+++.++..++|+++|+|+.+++.+++++++.++.++++++.+|+..
T Consensus 40 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 119 (210)
T 3c3p_A 40 VDRQTGRLLYLLARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLG 119 (210)
T ss_dssp CCHHHHHHHHHHHHHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHH
Confidence 44555555555555557789999999999999999998764589999999999999999999999987679999999854
No 70
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.16 E-value=2e-10 Score=99.93 Aligned_cols=65 Identities=20% Similarity=0.320 Sum_probs=55.6
Q ss_pred cCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 106 LNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 106 l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
+.+++|++|||+|||+|..+.++++..+ .+.|+|+|+|+.+++.+.+.+++. .++.++.+|+...
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~---~~v~~~~~d~~~~ 117 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRER---NNIIPLLFDASKP 117 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHC---SSEEEECSCTTCG
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcC---CCeEEEEcCCCCc
Confidence 4567899999999999999999999887 589999999999998888777654 2688999998764
No 71
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.16 E-value=9.1e-11 Score=106.58 Aligned_cols=72 Identities=15% Similarity=0.149 Sum_probs=62.7
Q ss_pred HHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 021397 100 GAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 100 ~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d 175 (313)
+.++.. +++|++|||+|||+|++++.+|.. + ..+|+|+|+|+.+++.+++|++.+|+.++++++++|+..|.
T Consensus 117 ~ri~~~--~~~g~~VlD~~aG~G~~~i~~a~~-g-~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~ 188 (278)
T 3k6r_A 117 VRMAKV--AKPDELVVDMFAGIGHLSLPIAVY-G-KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP 188 (278)
T ss_dssp HHHHHH--CCTTCEEEETTCTTTTTTHHHHHH-T-CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC
T ss_pred HHHHHh--cCCCCEEEEecCcCcHHHHHHHHh-c-CCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc
Confidence 334444 478999999999999999999986 3 36899999999999999999999999888999999998754
No 72
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.16 E-value=3.4e-10 Score=95.27 Aligned_cols=74 Identities=19% Similarity=0.207 Sum_probs=65.2
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCC-cEEEEecCCCC
Q 021397 97 AASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGD-RCRLFVADGTT 173 (313)
Q Consensus 97 ~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~-~v~~~~~D~~~ 173 (313)
..+..+...+.++++.+|||+|||+|..+..+++. ...|+++|+++.+++.++++++..++.+ +++++.+|+..
T Consensus 39 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~ 113 (194)
T 1dus_A 39 KGTKILVENVVVDKDDDILDLGCGYGVIGIALADE---VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE 113 (194)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT
T ss_pred hHHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhc
Confidence 56677778888889999999999999999999886 3699999999999999999999998853 39999999865
No 73
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.16 E-value=2.8e-10 Score=103.63 Aligned_cols=89 Identities=15% Similarity=0.106 Sum_probs=69.5
Q ss_pred CeEEEecHHHHHHHHh---cCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEE
Q 021397 90 GKIYGIDAASGAAVSA---LNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRL 166 (313)
Q Consensus 90 G~~~~Qd~ss~~~~~~---l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~ 166 (313)
|.+..+.....++-.+ +...++.+|||+|||+|..+..+++. + ..+|+|+|+|+.+++.+++|++++|+.+++++
T Consensus 100 ~~lipr~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~-~-~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~ 177 (284)
T 1nv8_A 100 GVFVPRPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF-S-DAIVFATDVSSKAVEIARKNAERHGVSDRFFV 177 (284)
T ss_dssp TSCCCCTTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH-S-SCEEEEEESCHHHHHHHHHHHHHTTCTTSEEE
T ss_pred CceecChhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEE
Confidence 3344444444443333 22346789999999999999999998 4 57999999999999999999999999767999
Q ss_pred EecCCCC-----C---Cccccc
Q 021397 167 FVADGTT-----F---SLAPLR 180 (313)
Q Consensus 167 ~~~D~~~-----~---d~v~~D 180 (313)
+++|+.. | |.+..|
T Consensus 178 ~~~D~~~~~~~~f~~~D~Ivsn 199 (284)
T 1nv8_A 178 RKGEFLEPFKEKFASIEMILSN 199 (284)
T ss_dssp EESSTTGGGGGGTTTCCEEEEC
T ss_pred EECcchhhcccccCCCCEEEEc
Confidence 9999853 6 777677
No 74
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.15 E-value=1e-10 Score=101.14 Aligned_cols=94 Identities=18% Similarity=0.112 Sum_probs=73.6
Q ss_pred ecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 95 IDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 95 Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
|..-..++...+...++.+|||+|||+|..+..+++.. ..|+|+|+|+.+++.+++++...+ +++++++|+..+
T Consensus 36 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~ 109 (216)
T 3ofk_A 36 RERHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTKRWS---HISWAATDILQF 109 (216)
T ss_dssp HHHHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTTTCS---SEEEEECCTTTC
T ss_pred HHHHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcccCC---CeEEEEcchhhC
Confidence 33444556667777888999999999999999998762 589999999999999998876543 699999999887
Q ss_pred CccccccccCccccccccccccc
Q 021397 175 SLAPLRLLLDPGSCNSVLQEKDD 197 (313)
Q Consensus 175 d~v~~D~~l~~~s~sg~l~~~p~ 197 (313)
+ .+..||.+.|.+++.+.++
T Consensus 110 ~---~~~~fD~v~~~~~l~~~~~ 129 (216)
T 3ofk_A 110 S---TAELFDLIVVAEVLYYLED 129 (216)
T ss_dssp C---CSCCEEEEEEESCGGGSSS
T ss_pred C---CCCCccEEEEccHHHhCCC
Confidence 6 2455666677777765553
No 75
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.15 E-value=2e-10 Score=99.51 Aligned_cols=93 Identities=26% Similarity=0.243 Sum_probs=71.3
Q ss_pred HHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCC----cEEEEecCCCCCCc
Q 021397 101 AAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGD----RCRLFVADGTTFSL 176 (313)
Q Consensus 101 ~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~----~v~~~~~D~~~~d~ 176 (313)
.+...+...++.+|||+|||+|..+..+++..+ ...|+|+|+|+.+++.++++++..++.. +++++.+|+...+.
T Consensus 20 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 98 (217)
T 3jwh_A 20 GVVAALKQSNARRVIDLGCGQGNLLKILLKDSF-FEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDK 98 (217)
T ss_dssp HHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTT-CSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCG
T ss_pred HHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCC-CCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccc
Confidence 445555667889999999999999999998643 3699999999999999999998877753 69999999865442
Q ss_pred cccccccCcccccccccccc
Q 021397 177 APLRLLLDPGSCNSVLQEKD 196 (313)
Q Consensus 177 v~~D~~l~~~s~sg~l~~~p 196 (313)
.+..||.+.|..++.+-+
T Consensus 99 --~~~~fD~v~~~~~l~~~~ 116 (217)
T 3jwh_A 99 --RFHGYDAATVIEVIEHLD 116 (217)
T ss_dssp --GGCSCSEEEEESCGGGCC
T ss_pred --cCCCcCEEeeHHHHHcCC
Confidence 123455557777665443
No 76
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.15 E-value=1.1e-10 Score=100.92 Aligned_cols=84 Identities=13% Similarity=0.078 Sum_probs=63.6
Q ss_pred hcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHc------------CCCCcEEEEecCCC
Q 021397 105 ALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKY------------ALGDRCRLFVADGT 172 (313)
Q Consensus 105 ~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~------------g~~~~v~~~~~D~~ 172 (313)
.+.+.++.+|||+|||+|..+..+++. + ..|+|+|+|+.|++.++++.+.. .. .+++++++|+.
T Consensus 17 ~l~~~~~~~vLD~GCG~G~~~~~la~~-g--~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~d~~ 92 (203)
T 1pjz_A 17 SLNVVPGARVLVPLCGKSQDMSWLSGQ-G--YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAA-PGIEIWCGDFF 92 (203)
T ss_dssp HHCCCTTCEEEETTTCCSHHHHHHHHH-C--CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEEC-SSSEEEEECCS
T ss_pred hcccCCCCEEEEeCCCCcHhHHHHHHC-C--CeEEEEeCCHHHHHHHHHHccCCcccccccccccccC-CccEEEECccc
Confidence 456678999999999999999999986 2 58999999999999999875421 12 37999999998
Q ss_pred CCCccccc-cccCcccccccccc
Q 021397 173 TFSLAPLR-LLLDPGSCNSVLQE 194 (313)
Q Consensus 173 ~~d~v~~D-~~l~~~s~sg~l~~ 194 (313)
.++. .| ..||.+.+.+++..
T Consensus 93 ~l~~--~~~~~fD~v~~~~~l~~ 113 (203)
T 1pjz_A 93 ALTA--RDIGHCAAFYDRAAMIA 113 (203)
T ss_dssp SSTH--HHHHSEEEEEEESCGGG
T ss_pred cCCc--ccCCCEEEEEECcchhh
Confidence 8764 12 34555566565543
No 77
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.15 E-value=2e-11 Score=104.82 Aligned_cols=70 Identities=23% Similarity=0.256 Sum_probs=42.6
Q ss_pred CCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCC-----------CCCCcc
Q 021397 109 SAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADG-----------TTFSLA 177 (313)
Q Consensus 109 ~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~-----------~~~d~v 177 (313)
.++.+|||+|||+|..+..+++..+ ..+|+|+|+|+.+++.++++++..+. +++++++|+ ..||.+
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~fD~i 105 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACP-GVSVTAVDLSMDALAVARRNAERFGA--VVDWAAADGIEWLIERAERGRPWHAI 105 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCT-TEEEEEEECC---------------------CCHHHHHHHHHHHHHTTCCBSEE
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhCC--ceEEEEcchHhhhhhhhhccCcccEE
Confidence 6789999999999999999999854 46999999999999999999998887 688888886 346666
Q ss_pred cccc
Q 021397 178 PLRL 181 (313)
Q Consensus 178 ~~D~ 181 (313)
..||
T Consensus 106 ~~np 109 (215)
T 4dzr_A 106 VSNP 109 (215)
T ss_dssp EECC
T ss_pred EECC
Confidence 6663
No 78
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.15 E-value=1.4e-10 Score=100.92 Aligned_cols=65 Identities=8% Similarity=0.127 Sum_probs=58.1
Q ss_pred CCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 021397 109 SAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 109 ~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d 175 (313)
.++.+|||+|||+|..+..+|+..+ ...|+|+|+|+.+++.+++++++.++. ++.++++|+..++
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~giD~s~~~l~~a~~~~~~~~~~-nv~~~~~d~~~l~ 101 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNP-DINYIGIELFKSVIVTAVQKVKDSEAQ-NVKLLNIDADTLT 101 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHSCCS-SEEEECCCGGGHH
T ss_pred CCCceEEEEecCCCHHHHHHHHHCC-CCCEEEEEechHHHHHHHHHHHHcCCC-CEEEEeCCHHHHH
Confidence 4678999999999999999999864 479999999999999999999999985 7999999997643
No 79
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.14 E-value=8.4e-11 Score=101.36 Aligned_cols=63 Identities=16% Similarity=0.149 Sum_probs=54.7
Q ss_pred CCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALG-DRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~-~~v~~~~~D~~~~ 174 (313)
++.+|||+|||+|..+..++.. ....|+|+|+|+.+++.+++|++..++. ++++++++|+..+
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~ 116 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSR--QAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDF 116 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT--TCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHH
T ss_pred CCCeEEEcCCccCHHHHHHHHc--cCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHH
Confidence 6889999999999999987765 2368999999999999999999999983 4799999997543
No 80
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.14 E-value=7.3e-11 Score=108.06 Aligned_cols=115 Identities=15% Similarity=0.033 Sum_probs=84.9
Q ss_pred CCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccccccccCcc
Q 021397 107 NISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLRLLLDPG 186 (313)
Q Consensus 107 ~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D~~l~~~ 186 (313)
.++++.+|||+|||+|..+..++........|+++|+|+.+++.+++++...|+.++++++++|+..++. +..||.+
T Consensus 115 ~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---~~~fD~v 191 (305)
T 3ocj_A 115 HLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDT---REGYDLL 191 (305)
T ss_dssp HCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCC---CSCEEEE
T ss_pred hCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCc---cCCeEEE
Confidence 4678999999999999999998633344579999999999999999999999987679999999987653 2344555
Q ss_pred cccccccccccccccccccchhHHHHHHHHHHHHHhhhhhccccCcceeEeecCCcEEEEEcCC
Q 021397 187 SCNSVLQEKDDTFREWTSRIPWKERKRAVKARENAASKAIVRSEHPELIFYGRRSGIVGLTKEE 250 (313)
Q Consensus 187 s~sg~l~~~p~~~~~w~~~~~~~~~~~~~q~~~l~~~~~~~r~~~~El~~~~k~gG~lvysTcs 250 (313)
.+.+++.+.++. .....++....+.+ +|||+++.++..
T Consensus 192 ~~~~~~~~~~~~---------------~~~~~~l~~~~~~L-----------kpgG~l~i~~~~ 229 (305)
T 3ocj_A 192 TSNGLNIYEPDD---------------ARVTELYRRFWQAL-----------KPGGALVTSFLT 229 (305)
T ss_dssp ECCSSGGGCCCH---------------HHHHHHHHHHHHHE-----------EEEEEEEEECCC
T ss_pred EECChhhhcCCH---------------HHHHHHHHHHHHhc-----------CCCeEEEEEecC
Confidence 666666554442 01112233444455 559999998865
No 81
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.14 E-value=4.1e-11 Score=106.07 Aligned_cols=61 Identities=8% Similarity=-0.047 Sum_probs=53.1
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGT 172 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~ 172 (313)
..+|.+|||+|||+|..+..+++..+ ..|+++|+|+.+++.++++.+..+. ++.++.+|+.
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~~~--~~v~~id~~~~~~~~a~~~~~~~~~--~~~~~~~~a~ 118 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQTH--KVIPLKGLWE 118 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTSCE--EEEEEEECCHHHHHHHHHHGGGCSS--EEEEEESCHH
T ss_pred ccCCCeEEEECCCccHHHHHHHHhCC--cEEEEEeCCHHHHHHHHHHHhhCCC--ceEEEeehHH
Confidence 46799999999999999999987532 5899999999999999999888775 6889998874
No 82
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.14 E-value=5.6e-10 Score=96.73 Aligned_cols=65 Identities=12% Similarity=0.186 Sum_probs=58.6
Q ss_pred CCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 021397 109 SAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 109 ~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d 175 (313)
.++.+|||+|||+|..+..+++..+ ...|+|+|+|+.+++.+++++++.++. ++.++++|+..++
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~ 104 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNP-DINYIGIDIQKSVLSYALDKVLEVGVP-NIKLLWVDGSDLT 104 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHHCCS-SEEEEECCSSCGG
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCC-CCCEEEEEcCHHHHHHHHHHHHHcCCC-CEEEEeCCHHHHH
Confidence 4688999999999999999999865 479999999999999999999999984 7999999997654
No 83
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.14 E-value=8.4e-11 Score=105.59 Aligned_cols=77 Identities=19% Similarity=0.100 Sum_probs=67.9
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHH---cCCCCcEEEEecCCCC
Q 021397 97 AASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQK---YALGDRCRLFVADGTT 173 (313)
Q Consensus 97 ~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~---~g~~~~v~~~~~D~~~ 173 (313)
..+.+++.++.+.++.+|||+|||+|..++.+++..+ ...|+|+|+++.+++.+++|++. +++.++++++++|+..
T Consensus 23 ~D~~lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~-~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~ 101 (260)
T 2ozv_A 23 MDAMLLASLVADDRACRIADLGAGAGAAGMAVAARLE-KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTL 101 (260)
T ss_dssp CHHHHHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCT-TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTC
T ss_pred cHHHHHHHHhcccCCCEEEEeCChHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHH
Confidence 3467788888888899999999999999999999864 37999999999999999999988 8886679999999865
Q ss_pred C
Q 021397 174 F 174 (313)
Q Consensus 174 ~ 174 (313)
+
T Consensus 102 ~ 102 (260)
T 2ozv_A 102 R 102 (260)
T ss_dssp C
T ss_pred H
Confidence 4
No 84
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.13 E-value=1.5e-10 Score=103.48 Aligned_cols=66 Identities=17% Similarity=0.124 Sum_probs=59.5
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d 175 (313)
+.++.+|||+|||+|..++.++...+ ..+|+++|+|+.+++.++++++++|+. +++++++|+..+.
T Consensus 78 ~~~~~~vLDiG~G~G~~~i~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~l~-~v~~~~~d~~~~~ 143 (249)
T 3g89_A 78 WQGPLRVLDLGTGAGFPGLPLKIVRP-ELELVLVDATRKKVAFVERAIEVLGLK-GARALWGRAEVLA 143 (249)
T ss_dssp CCSSCEEEEETCTTTTTHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEECCHHHHT
T ss_pred cCCCCEEEEEcCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhCCC-ceEEEECcHHHhh
Confidence 46789999999999999999998765 479999999999999999999999996 5999999987654
No 85
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.13 E-value=1.5e-10 Score=102.24 Aligned_cols=67 Identities=19% Similarity=0.145 Sum_probs=59.0
Q ss_pred CCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 021397 107 NISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 107 ~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d 175 (313)
.+.++.+|||+|||+|..+..++...+ .++|+|+|+|+.+++.+++++++.|+. +++++++|+..++
T Consensus 67 ~~~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~ 133 (240)
T 1xdz_A 67 DFNQVNTICDVGAGAGFPSLPIKICFP-HLHVTIVDSLNKRITFLEKLSEALQLE-NTTFCHDRAETFG 133 (240)
T ss_dssp CGGGCCEEEEECSSSCTTHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEESCHHHHT
T ss_pred ccCCCCEEEEecCCCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEeccHHHhc
Confidence 445789999999999999999998644 479999999999999999999999986 6999999987654
No 86
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.13 E-value=4.1e-10 Score=102.56 Aligned_cols=87 Identities=8% Similarity=0.093 Sum_probs=68.3
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHc-CCCCcEEEEecCCCCCCccc----cccc
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKY-ALGDRCRLFVADGTTFSLAP----LRLL 182 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~-g~~~~v~~~~~D~~~~d~v~----~D~~ 182 (313)
..++.+|||+|||+|..+..+++.++...+|+|+|+|+.+++.++++++.. +...+++++++|+..++... .+..
T Consensus 34 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 113 (299)
T 3g5t_A 34 DGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQK 113 (299)
T ss_dssp CSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSC
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCC
Confidence 357899999999999999999987644589999999999999999999887 44458999999998876421 0134
Q ss_pred cCcccccccccc
Q 021397 183 LDPGSCNSVLQE 194 (313)
Q Consensus 183 l~~~s~sg~l~~ 194 (313)
||.+.|..+++.
T Consensus 114 fD~V~~~~~l~~ 125 (299)
T 3g5t_A 114 IDMITAVECAHW 125 (299)
T ss_dssp EEEEEEESCGGG
T ss_pred eeEEeHhhHHHH
Confidence 555566666543
No 87
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.13 E-value=3e-10 Score=102.75 Aligned_cols=82 Identities=11% Similarity=0.034 Sum_probs=67.5
Q ss_pred eEEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecC
Q 021397 91 KIYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVAD 170 (313)
Q Consensus 91 ~~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D 170 (313)
.|..|.........+..+.+|++|||+|||+|.++..+++..+ .++|+|+|+++.+++.+++|++.+++. ++.++++|
T Consensus 100 ~f~~~~~~~e~~~~~~~~~~~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n~l~-~~~~~~~d 177 (272)
T 3a27_A 100 IMWSQGNIEERKRMAFISNENEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLNKLN-NVIPILAD 177 (272)
T ss_dssp SCCCGGGHHHHHHHHTSCCTTCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHTTCS-SEEEEESC
T ss_pred EEECCCchHHHHHHHHhcCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEECC
Confidence 3444544444444455578899999999999999999999864 469999999999999999999999986 68999999
Q ss_pred CCCC
Q 021397 171 GTTF 174 (313)
Q Consensus 171 ~~~~ 174 (313)
+..+
T Consensus 178 ~~~~ 181 (272)
T 3a27_A 178 NRDV 181 (272)
T ss_dssp GGGC
T ss_pred hHHc
Confidence 9765
No 88
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.12 E-value=1.1e-10 Score=102.20 Aligned_cols=63 Identities=17% Similarity=0.243 Sum_probs=57.1
Q ss_pred CCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 021397 109 SAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT 173 (313)
Q Consensus 109 ~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~ 173 (313)
.++..|||+|||+|..+..+|+..+ ...|+|+|+|+.+++.+++++++.|+. |+.++++|+..
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~p-~~~v~giD~s~~~l~~a~~~~~~~~l~-nv~~~~~Da~~ 95 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDRP-EQDFLGIEVHSPGVGACLASAHEEGLS-NLRVMCHDAVE 95 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHTTCS-SEEEECSCHHH
T ss_pred CCCCeEEEEeeeChHHHHHHHHHCC-CCeEEEEEecHHHHHHHHHHHHHhCCC-cEEEEECCHHH
Confidence 3678999999999999999999865 478999999999999999999999986 69999999865
No 89
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.12 E-value=2.8e-10 Score=98.60 Aligned_cols=94 Identities=24% Similarity=0.268 Sum_probs=71.9
Q ss_pred HHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCC----cEEEEecCCCCCC
Q 021397 100 GAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGD----RCRLFVADGTTFS 175 (313)
Q Consensus 100 ~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~----~v~~~~~D~~~~d 175 (313)
..+...+...++.+|||+|||+|..+..+++..+ ...|+|+|+|+.+++.+++++...++.+ +++++.+|+...+
T Consensus 19 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 97 (219)
T 3jwg_A 19 GTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKS-FEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRD 97 (219)
T ss_dssp HHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTT-CCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCC
T ss_pred HHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccc
Confidence 3444555567789999999999999999998643 3699999999999999999998777653 7999999986544
Q ss_pred ccccccccCcccccccccccc
Q 021397 176 LAPLRLLLDPGSCNSVLQEKD 196 (313)
Q Consensus 176 ~v~~D~~l~~~s~sg~l~~~p 196 (313)
. .+..||.+.|..++.+.+
T Consensus 98 ~--~~~~fD~V~~~~~l~~~~ 116 (219)
T 3jwg_A 98 K--RFSGYDAATVIEVIEHLD 116 (219)
T ss_dssp G--GGTTCSEEEEESCGGGCC
T ss_pred c--ccCCCCEEEEHHHHHhCC
Confidence 2 234456567777765544
No 90
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.12 E-value=4.8e-10 Score=101.15 Aligned_cols=76 Identities=22% Similarity=0.297 Sum_probs=67.0
Q ss_pred HHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 99 SGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 99 s~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
+..++..+++.++.+|||+|||+|..+..+++.+++.+.|+++|+++.+++.++++++++++.++++++.+|+..+
T Consensus 101 ~~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 176 (277)
T 1o54_A 101 SSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG 176 (277)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC
T ss_pred HHHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc
Confidence 3456677889999999999999999999999987656899999999999999999999999855899999998654
No 91
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.11 E-value=1.6e-10 Score=101.94 Aligned_cols=80 Identities=11% Similarity=0.125 Sum_probs=67.8
Q ss_pred EecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 021397 94 GIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT 173 (313)
Q Consensus 94 ~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~ 173 (313)
++.....++..++...++.+|||+|||+|..+..+++.++..++|+++|+++.+++.+++++++.|+.++++++.+|+..
T Consensus 44 ~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 123 (239)
T 2hnk_A 44 ISPEEGQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALE 123 (239)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHH
Confidence 34455556666666678899999999999999999998865579999999999999999999999987669999999754
No 92
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.11 E-value=3.9e-10 Score=98.61 Aligned_cols=116 Identities=18% Similarity=0.191 Sum_probs=82.9
Q ss_pred HHHHhcC-CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCcccc
Q 021397 101 AAVSALN-ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPL 179 (313)
Q Consensus 101 ~~~~~l~-~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~ 179 (313)
.+...+. ..++.+|||+|||+|..+..+++..+ ...|+++|+|+.+++.+++++...+ +++++++|+..++..
T Consensus 34 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~~-- 107 (234)
T 3dtn_A 34 VSVSIASVDTENPDILDLGAGTGLLSAFLMEKYP-EATFTLVDMSEKMLEIAKNRFRGNL---KVKYIEADYSKYDFE-- 107 (234)
T ss_dssp HHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTCSCT---TEEEEESCTTTCCCC--
T ss_pred HHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHhhccCC---CEEEEeCchhccCCC--
Confidence 3444444 56789999999999999999999864 4799999999999999998875554 699999999876642
Q ss_pred ccccCcccccccccccccccccccccchhHHHHHHHHHHHHHhhhhhccccCcceeEeecCCcEEEEEcCC
Q 021397 180 RLLLDPGSCNSVLQEKDDTFREWTSRIPWKERKRAVKARENAASKAIVRSEHPELIFYGRRSGIVGLTKEE 250 (313)
Q Consensus 180 D~~l~~~s~sg~l~~~p~~~~~w~~~~~~~~~~~~~q~~~l~~~~~~~r~~~~El~~~~k~gG~lvysTcs 250 (313)
..||.+.|..++.+.++. ....++....+++ +|||.++.++..
T Consensus 108 -~~fD~v~~~~~l~~~~~~----------------~~~~~l~~~~~~L-----------kpgG~l~~~~~~ 150 (234)
T 3dtn_A 108 -EKYDMVVSALSIHHLEDE----------------DKKELYKRSYSIL-----------KESGIFINADLV 150 (234)
T ss_dssp -SCEEEEEEESCGGGSCHH----------------HHHHHHHHHHHHE-----------EEEEEEEEEEEC
T ss_pred -CCceEEEEeCccccCCHH----------------HHHHHHHHHHHhc-----------CCCcEEEEEEec
Confidence 334444666666544331 0112233334444 559999998876
No 93
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.11 E-value=8.1e-10 Score=104.32 Aligned_cols=87 Identities=7% Similarity=0.012 Sum_probs=71.7
Q ss_pred cccccCCeEEEecHHHHHHHHh-cCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCC
Q 021397 84 SMAYKQGKIYGIDAASGAAVSA-LNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGD 162 (313)
Q Consensus 84 ~~~~~~G~~~~Qd~ss~~~~~~-l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~ 162 (313)
...|..++...|+..+.++... ....+|.+|||+| |+|..+..++.. +..++|+++|+|+.+++.+++|++++|+.
T Consensus 145 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VLDlG-G~G~~~~~la~~-~~~~~v~~vDi~~~~l~~a~~~~~~~g~~- 221 (373)
T 2qm3_A 145 LHEFDQAYVTPETTVARVILMHTRGDLENKDIFVLG-DDDLTSIALMLS-GLPKRIAVLDIDERLTKFIEKAANEIGYE- 221 (373)
T ss_dssp CGGGTCCCBCHHHHHHHHHHHHHTTCSTTCEEEEES-CTTCHHHHHHHH-TCCSEEEEECSCHHHHHHHHHHHHHHTCC-
T ss_pred chhcCCeecCHHHHHHHHHHHhhcCCCCCCEEEEEC-CCCHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCC-
Confidence 3456777888888877766443 2345789999999 999999999876 33479999999999999999999999986
Q ss_pred cEEEEecCCCC
Q 021397 163 RCRLFVADGTT 173 (313)
Q Consensus 163 ~v~~~~~D~~~ 173 (313)
+++++.+|+..
T Consensus 222 ~v~~~~~D~~~ 232 (373)
T 2qm3_A 222 DIEIFTFDLRK 232 (373)
T ss_dssp CEEEECCCTTS
T ss_pred CEEEEEChhhh
Confidence 79999999876
No 94
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.11 E-value=6.3e-10 Score=97.90 Aligned_cols=82 Identities=13% Similarity=0.262 Sum_probs=72.0
Q ss_pred ccCCeEEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEE
Q 021397 87 YKQGKIYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRL 166 (313)
Q Consensus 87 ~~~G~~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~ 166 (313)
+..|....+......+...+.+.++.+|||+|||+|..+..+++..+ ++|+++|+++.+++.++++++..|+. ++++
T Consensus 68 ~~~~~~~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~ 144 (235)
T 1jg1_A 68 IPAGQTVSAPHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVK-NVHV 144 (235)
T ss_dssp CSTTCEECCHHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCC-SEEE
T ss_pred cCCCceeccHHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCC-CcEE
Confidence 45666666776677777888899999999999999999999999875 68999999999999999999999986 5999
Q ss_pred EecCC
Q 021397 167 FVADG 171 (313)
Q Consensus 167 ~~~D~ 171 (313)
+.+|+
T Consensus 145 ~~~d~ 149 (235)
T 1jg1_A 145 ILGDG 149 (235)
T ss_dssp EESCG
T ss_pred EECCc
Confidence 99997
No 95
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.11 E-value=4.6e-10 Score=99.45 Aligned_cols=93 Identities=19% Similarity=0.151 Sum_probs=72.2
Q ss_pred EecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 021397 94 GIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT 173 (313)
Q Consensus 94 ~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~ 173 (313)
.|......+...+.+.++.+|||+|||+|..+..+++..+ ...|+++|+|+.+++.++++ . .++.++.+|+..
T Consensus 17 ~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~-----~-~~~~~~~~d~~~ 89 (259)
T 2p35_A 17 ERTRPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYG-VNVITGIDSDDDMLEKAADR-----L-PNTNFGKADLAT 89 (259)
T ss_dssp GGGHHHHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHC-TTSEEEEESCHHHHHHHHHH-----S-TTSEEEECCTTT
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHh-----C-CCcEEEECChhh
Confidence 3555555666677788899999999999999999999875 36899999999999999877 2 368999999987
Q ss_pred CCccccccccCcccccccccccc
Q 021397 174 FSLAPLRLLLDPGSCNSVLQEKD 196 (313)
Q Consensus 174 ~d~v~~D~~l~~~s~sg~l~~~p 196 (313)
++ .+..||.+.+..++...+
T Consensus 90 ~~---~~~~fD~v~~~~~l~~~~ 109 (259)
T 2p35_A 90 WK---PAQKADLLYANAVFQWVP 109 (259)
T ss_dssp CC---CSSCEEEEEEESCGGGST
T ss_pred cC---ccCCcCEEEEeCchhhCC
Confidence 65 244556556666665443
No 96
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.11 E-value=6.5e-10 Score=99.73 Aligned_cols=94 Identities=15% Similarity=0.152 Sum_probs=74.4
Q ss_pred HHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCcccc
Q 021397 100 GAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPL 179 (313)
Q Consensus 100 ~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~ 179 (313)
.++.....+.++.+|||+|||+|..+..+++..+ ...|+++|+|+.+++.+++++...++. +++++.+|+..++. .
T Consensus 27 ~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~--~ 102 (276)
T 3mgg_A 27 KLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNP-DAEITSIDISPESLEKARENTEKNGIK-NVKFLQANIFSLPF--E 102 (276)
T ss_dssp HHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGCCS--C
T ss_pred HHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEcccccCCC--C
Confidence 3344445567899999999999999999999854 479999999999999999999999986 79999999987653 2
Q ss_pred ccccCccccccccccccc
Q 021397 180 RLLLDPGSCNSVLQEKDD 197 (313)
Q Consensus 180 D~~l~~~s~sg~l~~~p~ 197 (313)
+..||.+.+..++.+.++
T Consensus 103 ~~~fD~v~~~~~l~~~~~ 120 (276)
T 3mgg_A 103 DSSFDHIFVCFVLEHLQS 120 (276)
T ss_dssp TTCEEEEEEESCGGGCSC
T ss_pred CCCeeEEEEechhhhcCC
Confidence 345555567766655544
No 97
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.11 E-value=3.7e-10 Score=94.60 Aligned_cols=70 Identities=19% Similarity=0.196 Sum_probs=59.7
Q ss_pred HHHhcC-CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 021397 102 AVSALN-ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT 173 (313)
Q Consensus 102 ~~~~l~-~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~ 173 (313)
+...+. ..++.+|||+|||+|..+..+++. + ...|+|+|+|+.+++.++++++..++.++++++.+|+..
T Consensus 22 ~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 92 (177)
T 2esr_A 22 IFNMIGPYFNGGRVLDLFAGSGGLAIEAVSR-G-MSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER 92 (177)
T ss_dssp HHHHHCSCCCSCEEEEETCTTCHHHHHHHHT-T-CCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH
T ss_pred HHHHHHhhcCCCeEEEeCCCCCHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHH
Confidence 334444 567899999999999999999886 3 369999999999999999999999886679999999854
No 98
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.10 E-value=2.8e-10 Score=101.04 Aligned_cols=89 Identities=12% Similarity=0.123 Sum_probs=70.3
Q ss_pred HHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCcccc
Q 021397 100 GAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPL 179 (313)
Q Consensus 100 ~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~ 179 (313)
..+...+.++++.+|||+|||+|..+..+++.. ...|+|+|+|+.+++.+++++... .+++++.+|+..++. .
T Consensus 45 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~--~ 117 (266)
T 3ujc_A 45 KKILSDIELNENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGN---NKIIFEANDILTKEF--P 117 (266)
T ss_dssp HHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSC---TTEEEEECCTTTCCC--C
T ss_pred HHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcC---CCeEEEECccccCCC--C
Confidence 445556678899999999999999999999986 369999999999999999876544 379999999987653 2
Q ss_pred ccccCccccccccccc
Q 021397 180 RLLLDPGSCNSVLQEK 195 (313)
Q Consensus 180 D~~l~~~s~sg~l~~~ 195 (313)
+..||.+.+..++.+.
T Consensus 118 ~~~fD~v~~~~~l~~~ 133 (266)
T 3ujc_A 118 ENNFDLIYSRDAILAL 133 (266)
T ss_dssp TTCEEEEEEESCGGGS
T ss_pred CCcEEEEeHHHHHHhc
Confidence 3455555777666554
No 99
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.09 E-value=8.8e-10 Score=96.23 Aligned_cols=99 Identities=18% Similarity=0.184 Sum_probs=75.5
Q ss_pred ccCCeEEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEE
Q 021397 87 YKQGKIYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRL 166 (313)
Q Consensus 87 ~~~G~~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~ 166 (313)
+..|....+......+...+.+.++.+|||+|||+|..+..+++.. ..|+++|+++.+++.+++++...+ ++++
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~---~v~~ 120 (231)
T 1vbf_A 47 ILPGINTTALNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYN---NIKL 120 (231)
T ss_dssp EETTEEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCS---SEEE
T ss_pred eCCCCccCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcC---CeEE
Confidence 3456666666666677788888999999999999999999999873 689999999999999999987766 6999
Q ss_pred EecCCCCCCccccccccCccccccccc
Q 021397 167 FVADGTTFSLAPLRLLLDPGSCNSVLQ 193 (313)
Q Consensus 167 ~~~D~~~~d~v~~D~~l~~~s~sg~l~ 193 (313)
+.+|+.... ..+..||.+.+.+.+.
T Consensus 121 ~~~d~~~~~--~~~~~fD~v~~~~~~~ 145 (231)
T 1vbf_A 121 ILGDGTLGY--EEEKPYDRVVVWATAP 145 (231)
T ss_dssp EESCGGGCC--GGGCCEEEEEESSBBS
T ss_pred EECCccccc--ccCCCccEEEECCcHH
Confidence 999986521 1123344445555443
No 100
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.09 E-value=9.6e-10 Score=98.90 Aligned_cols=82 Identities=22% Similarity=0.224 Sum_probs=69.4
Q ss_pred EecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHc-C-CCCcEEEEecCC
Q 021397 94 GIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKY-A-LGDRCRLFVADG 171 (313)
Q Consensus 94 ~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~-g-~~~~v~~~~~D~ 171 (313)
+....+..+...+++.++.+|||+|||+|..+..+++.+++.+.|+++|+++.+++.++++++.. | +.++++++.+|+
T Consensus 83 ~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~ 162 (280)
T 1i9g_A 83 IYPKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDL 162 (280)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCG
T ss_pred ecHHHHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECch
Confidence 34445556677888999999999999999999999998765689999999999999999999988 6 334799999998
Q ss_pred CCCC
Q 021397 172 TTFS 175 (313)
Q Consensus 172 ~~~d 175 (313)
...+
T Consensus 163 ~~~~ 166 (280)
T 1i9g_A 163 ADSE 166 (280)
T ss_dssp GGCC
T ss_pred HhcC
Confidence 7653
No 101
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.09 E-value=4.8e-10 Score=99.50 Aligned_cols=64 Identities=5% Similarity=0.092 Sum_probs=56.8
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHc--------CCCCcEEEEecCCCC
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKY--------ALGDRCRLFVADGTT 173 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~--------g~~~~v~~~~~D~~~ 173 (313)
+.++.+|||+|||+|..+..+++..+ ...|+|+|+|+.+++.++++++.+ ++. ++.++.+|+..
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~-nv~~~~~D~~~ 118 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAFP-EDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQ-NINVLRGNAMK 118 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHST-TSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTT-TEEEEECCTTS
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCC-CCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCC-cEEEEeccHHH
Confidence 45788999999999999999999864 468999999999999999999887 775 79999999876
No 102
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.08 E-value=9.8e-10 Score=91.68 Aligned_cols=77 Identities=16% Similarity=0.287 Sum_probs=65.7
Q ss_pred EEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 021397 93 YGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGT 172 (313)
Q Consensus 93 ~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~ 172 (313)
..++.-...+...+.+.++.+|||+|||+|..+..+++ ....|+|+|+|+.+++.++++++.+++. +++++.+|+.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~~~~~~d~~ 93 (183)
T 2yxd_A 18 ITKEEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK---RCKFVYAIDYLDGAIEVTKQNLAKFNIK-NCQIIKGRAE 93 (183)
T ss_dssp CCCHHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT---TSSEEEEEECSHHHHHHHHHHHHHTTCC-SEEEEESCHH
T ss_pred cCHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEECCcc
Confidence 34445555666777888999999999999999999988 3479999999999999999999999985 7999999986
Q ss_pred C
Q 021397 173 T 173 (313)
Q Consensus 173 ~ 173 (313)
.
T Consensus 94 ~ 94 (183)
T 2yxd_A 94 D 94 (183)
T ss_dssp H
T ss_pred c
Confidence 4
No 103
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.08 E-value=5.4e-10 Score=105.82 Aligned_cols=90 Identities=20% Similarity=0.272 Sum_probs=70.3
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHc-----C-CC-CcEEEEecCCCCCCc----
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKY-----A-LG-DRCRLFVADGTTFSL---- 176 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~-----g-~~-~~v~~~~~D~~~~d~---- 176 (313)
+.++.+|||+|||+|..+..+++..+..+.|+++|+|+.+++.++++++++ | .. .+++++.+|+..+..
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 568899999999999999999999865679999999999999999998766 4 21 379999999987621
Q ss_pred cccccccCccccccccccccc
Q 021397 177 APLRLLLDPGSCNSVLQEKDD 197 (313)
Q Consensus 177 v~~D~~l~~~s~sg~l~~~p~ 197 (313)
.+.+..||.+.+..++...++
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d 181 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTN 181 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSC
T ss_pred CCCCCCEEEEEEccchhcCCC
Confidence 112345666677776655443
No 104
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.07 E-value=5.9e-10 Score=100.64 Aligned_cols=108 Identities=14% Similarity=0.126 Sum_probs=81.6
Q ss_pred CCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccccccccCccccc
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLRLLLDPGSCN 189 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D~~l~~~s~s 189 (313)
++.+|||+|||+|..+..+++. ...|+|+|+|+.+++.++++++..|+..+++++.+|+..++. ..+..||.+.|.
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~fD~v~~~ 143 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER---GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVAS-HLETPVDLILFH 143 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGG-GCSSCEEEEEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhh-hcCCCceEEEEC
Confidence 3689999999999999999986 368999999999999999999998886689999999987652 124556666777
Q ss_pred ccccccccccccccccchhHHHHHHHHHHHHHhhhhhccccCcceeEeecCCcEEEEEcCC
Q 021397 190 SVLQEKDDTFREWTSRIPWKERKRAVKARENAASKAIVRSEHPELIFYGRRSGIVGLTKEE 250 (313)
Q Consensus 190 g~l~~~p~~~~~w~~~~~~~~~~~~~q~~~l~~~~~~~r~~~~El~~~~k~gG~lvysTcs 250 (313)
+++.+.++. ...+....+++ +|||+++.++..
T Consensus 144 ~~l~~~~~~------------------~~~l~~~~~~L-----------kpgG~l~~~~~~ 175 (285)
T 4htf_A 144 AVLEWVADP------------------RSVLQTLWSVL-----------RPGGVLSLMFYN 175 (285)
T ss_dssp SCGGGCSCH------------------HHHHHHHHHTE-----------EEEEEEEEEEEB
T ss_pred chhhcccCH------------------HHHHHHHHHHc-----------CCCeEEEEEEeC
Confidence 777655542 11223334444 559999988764
No 105
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.07 E-value=1.4e-09 Score=93.61 Aligned_cols=112 Identities=15% Similarity=0.068 Sum_probs=80.7
Q ss_pred HHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccccc
Q 021397 101 AAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLR 180 (313)
Q Consensus 101 ~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D 180 (313)
+...+....++.+|||+|||+|..+..+++. ..+|+++|+|+.+++.+++ .+.. +++++.+|+..+ ..+
T Consensus 37 ~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~----~~~~-~~~~~~~d~~~~---~~~ 105 (218)
T 3ou2_A 37 ALERLRAGNIRGDVLELASGTGYWTRHLSGL---ADRVTALDGSAEMIAEAGR----HGLD-NVEFRQQDLFDW---TPD 105 (218)
T ss_dssp HHHHHTTTTSCSEEEEESCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHGG----GCCT-TEEEEECCTTSC---CCS
T ss_pred HHHHHhcCCCCCeEEEECCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHh----cCCC-CeEEEecccccC---CCC
Confidence 3333334778889999999999999999987 3689999999999999987 5654 799999999776 234
Q ss_pred cccCcccccccccccccccccccccchhHHHHHHHHHHHHHhhhhhccccCcceeEeecCCcEEEEEcCC
Q 021397 181 LLLDPGSCNSVLQEKDDTFREWTSRIPWKERKRAVKARENAASKAIVRSEHPELIFYGRRSGIVGLTKEE 250 (313)
Q Consensus 181 ~~l~~~s~sg~l~~~p~~~~~w~~~~~~~~~~~~~q~~~l~~~~~~~r~~~~El~~~~k~gG~lvysTcs 250 (313)
..||.+.|..++.+.++. ....++....+.+ +|||.++.++..
T Consensus 106 ~~~D~v~~~~~l~~~~~~----------------~~~~~l~~~~~~L-----------~pgG~l~~~~~~ 148 (218)
T 3ou2_A 106 RQWDAVFFAHWLAHVPDD----------------RFEAFWESVRSAV-----------APGGVVEFVDVT 148 (218)
T ss_dssp SCEEEEEEESCGGGSCHH----------------HHHHHHHHHHHHE-----------EEEEEEEEEEEC
T ss_pred CceeEEEEechhhcCCHH----------------HHHHHHHHHHHHc-----------CCCeEEEEEeCC
Confidence 555656777766554431 0122233334444 559999999887
No 106
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.06 E-value=4.5e-10 Score=94.36 Aligned_cols=77 Identities=16% Similarity=0.178 Sum_probs=65.8
Q ss_pred EecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 021397 94 GIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT 173 (313)
Q Consensus 94 ~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~ 173 (313)
.++.....+...+.+.++.+|||+|||+|..+..+++.. ..|+++|+|+.+++.++++++..++.+++.++.+|+..
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 93 (192)
T 1l3i_A 17 TAMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE 93 (192)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH
T ss_pred ChHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH
Confidence 344555666677788999999999999999999998764 68999999999999999999999985579999998754
No 107
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.06 E-value=7.1e-11 Score=103.94 Aligned_cols=67 Identities=12% Similarity=0.076 Sum_probs=56.0
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCC-HHHHHHH---HHHHHHcCCCCcEEEEecCCCCCCc
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVA-RHRLAAC---RTLLQKYALGDRCRLFVADGTTFSL 176 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s-~~~l~~~---~~~~~~~g~~~~v~~~~~D~~~~d~ 176 (313)
.+++++|||+|||+|..+..+++..+ ...|+|+|+| +.+++.+ ++++++.++. ++.++.+|+..++.
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~-~v~~~~~d~~~l~~ 92 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAINDQ-NTFYIGIDPVKENLFDISKKIIKKPSKGGLS-NVVFVIAAAESLPF 92 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHTCT-TEEEEEECSCCGGGHHHHHHHTSCGGGTCCS-SEEEECCBTTBCCG
T ss_pred CCCCCEEEEEeccCcHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHcCCC-CeEEEEcCHHHhhh
Confidence 36889999999999999999997543 4789999999 6777666 8888788886 79999999988754
No 108
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.06 E-value=3.6e-10 Score=105.33 Aligned_cols=62 Identities=16% Similarity=0.212 Sum_probs=56.1
Q ss_pred CCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 109 SAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 109 ~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.+|.+|||+|||+|+.++. ++ + ...|+|+|+|+.+++.+++|++.+++.++++++++|+..+
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~-~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~ 255 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--N-AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREV 255 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--T-SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGC
T ss_pred CCCCEEEEccCccCHHHHh-cc--C-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHh
Confidence 5789999999999999999 76 3 4799999999999999999999999866899999999754
No 109
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.06 E-value=8.7e-10 Score=94.58 Aligned_cols=76 Identities=13% Similarity=0.076 Sum_probs=62.1
Q ss_pred HHHHHHHHhcC--CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 97 AASGAAVSALN--ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 97 ~ss~~~~~~l~--~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
+....+...+. +.++.+|||+|||+|..+..+++. + ...|+|+|+|+.+++.++++++..++. +++++.+|+..+
T Consensus 45 ~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~ 121 (205)
T 3grz_A 45 QTTQLAMLGIERAMVKPLTVADVGTGSGILAIAAHKL-G-AKSVLATDISDESMTAAEENAALNGIY-DIALQKTSLLAD 121 (205)
T ss_dssp HHHHHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHTTCC-CCEEEESSTTTT
T ss_pred ccHHHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEecccccc
Confidence 33444444444 678899999999999999998874 3 369999999999999999999999986 499999998764
Q ss_pred C
Q 021397 175 S 175 (313)
Q Consensus 175 d 175 (313)
.
T Consensus 122 ~ 122 (205)
T 3grz_A 122 V 122 (205)
T ss_dssp C
T ss_pred C
Confidence 3
No 110
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.05 E-value=8.6e-10 Score=99.63 Aligned_cols=83 Identities=19% Similarity=0.068 Sum_probs=67.6
Q ss_pred HhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCcccccccc
Q 021397 104 SALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLRLLL 183 (313)
Q Consensus 104 ~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D~~l 183 (313)
..+...++.+|||+|||+|..+..+++. ...|+|+|+|+.+++.+++++...++ +++++.+|+..++. +..|
T Consensus 114 ~~~~~~~~~~vLD~GcG~G~~~~~l~~~---g~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~---~~~f 185 (286)
T 3m70_A 114 DAAKIISPCKVLDLGCGQGRNSLYLSLL---GYDVTSWDHNENSIAFLNETKEKENL--NISTALYDINAANI---QENY 185 (286)
T ss_dssp HHHHHSCSCEEEEESCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCGGGCCC---CSCE
T ss_pred HHhhccCCCcEEEECCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHHcCC--ceEEEEeccccccc---cCCc
Confidence 3444457899999999999999999986 35899999999999999999999988 69999999987654 4445
Q ss_pred Ccccccccccc
Q 021397 184 DPGSCNSVLQE 194 (313)
Q Consensus 184 ~~~s~sg~l~~ 194 (313)
|.+.+..++.+
T Consensus 186 D~i~~~~~~~~ 196 (286)
T 3m70_A 186 DFIVSTVVFMF 196 (286)
T ss_dssp EEEEECSSGGG
T ss_pred cEEEEccchhh
Confidence 55566666653
No 111
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.05 E-value=4.3e-10 Score=106.28 Aligned_cols=89 Identities=19% Similarity=0.138 Sum_probs=69.6
Q ss_pred ccccCCeEEEe------cHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHc
Q 021397 85 MAYKQGKIYGI------DAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKY 158 (313)
Q Consensus 85 ~~~~~G~~~~Q------d~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~ 158 (313)
..++.|+-..| ..-+..+..+. ..++.+|||+|||+|+.+..++.... .+.|+|+|+|+.+++.+++|++.+
T Consensus 187 ~l~~rgyr~~~~~a~l~~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~-~~~v~g~Dis~~~l~~A~~n~~~~ 264 (373)
T 3tm4_A 187 SLHKRPWRVYDHPAHLKASIANAMIELA-ELDGGSVLDPMCGSGTILIELALRRY-SGEIIGIEKYRKHLIGAEMNALAA 264 (373)
T ss_dssp CTTCCTTCCSCCTTCCCHHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTC-CSCEEEEESCHHHHHHHHHHHHHT
T ss_pred ccccCCcccccCCCCccHHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHHc
Confidence 44555654333 22233344455 78899999999999999999998643 358999999999999999999999
Q ss_pred CCCCcEEEEecCCCCCC
Q 021397 159 ALGDRCRLFVADGTTFS 175 (313)
Q Consensus 159 g~~~~v~~~~~D~~~~d 175 (313)
|+.++++++++|+..++
T Consensus 265 gl~~~i~~~~~D~~~~~ 281 (373)
T 3tm4_A 265 GVLDKIKFIQGDATQLS 281 (373)
T ss_dssp TCGGGCEEEECCGGGGG
T ss_pred CCCCceEEEECChhhCC
Confidence 98668999999987654
No 112
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.05 E-value=2e-09 Score=94.41 Aligned_cols=67 Identities=25% Similarity=0.322 Sum_probs=58.3
Q ss_pred hcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 105 ALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 105 ~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.+.++++++|||+|||+|..+..+++..++.++|+|+|+|+.+++.+.+++++. .+++++.+|+...
T Consensus 72 ~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~---~~v~~~~~d~~~~ 138 (233)
T 2ipx_A 72 QIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR---TNIIPVIEDARHP 138 (233)
T ss_dssp CCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC---TTEEEECSCTTCG
T ss_pred eecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc---CCeEEEEcccCCh
Confidence 345778999999999999999999999865579999999999999988888776 3799999999764
No 113
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.05 E-value=4.1e-10 Score=106.21 Aligned_cols=67 Identities=13% Similarity=0.149 Sum_probs=56.8
Q ss_pred HHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 021397 102 AVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT 173 (313)
Q Consensus 102 ~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~ 173 (313)
+...+++. +.+|||+|||+|.+++.+|+. ..+|+|+|+|+.+++.+++|++.+|+. +++++.+|+..
T Consensus 206 ~~~~~~~~-~~~vLDl~cG~G~~~l~la~~---~~~V~gvd~~~~ai~~a~~n~~~ng~~-~v~~~~~d~~~ 272 (369)
T 3bt7_A 206 ALDVTKGS-KGDLLELYCGNGNFSLALARN---FDRVLATEIAKPSVAAAQYNIAANHID-NVQIIRMAAEE 272 (369)
T ss_dssp HHHHTTTC-CSEEEEESCTTSHHHHHHGGG---SSEEEEECCCHHHHHHHHHHHHHTTCC-SEEEECCCSHH
T ss_pred HHHHhhcC-CCEEEEccCCCCHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEECCHHH
Confidence 33445444 678999999999999999873 368999999999999999999999985 79999999843
No 114
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.05 E-value=1.7e-09 Score=94.20 Aligned_cols=74 Identities=9% Similarity=0.138 Sum_probs=62.7
Q ss_pred HHHHHhc--CCCCCCEEEEECCCcChHHHHHHHHhC----CCcEEEEEcCCHHHHHHHHHHHHHcCC----CCcEEEEec
Q 021397 100 GAAVSAL--NISAGDHVLDLCAAPGAKLCMILDIIG----DSGSVTGVDVARHRLAACRTLLQKYAL----GDRCRLFVA 169 (313)
Q Consensus 100 ~~~~~~l--~~~~g~~VLDlcagpG~kt~~la~~~~----~~~~V~avD~s~~~l~~~~~~~~~~g~----~~~v~~~~~ 169 (313)
..+...+ .++++.+|||+|||+|..+..+++..+ +.++|+++|+++.+++.+++++++.++ .++++++.+
T Consensus 68 ~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 147 (227)
T 2pbf_A 68 ALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHK 147 (227)
T ss_dssp HHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEEC
T ss_pred HHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEEC
Confidence 3444555 578899999999999999999999875 457999999999999999999999883 247999999
Q ss_pred CCCC
Q 021397 170 DGTT 173 (313)
Q Consensus 170 D~~~ 173 (313)
|+..
T Consensus 148 d~~~ 151 (227)
T 2pbf_A 148 NIYQ 151 (227)
T ss_dssp CGGG
T ss_pred ChHh
Confidence 9865
No 115
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.04 E-value=8.2e-10 Score=92.84 Aligned_cols=70 Identities=10% Similarity=0.070 Sum_probs=58.9
Q ss_pred HHHhc-CCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 021397 102 AVSAL-NISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT 173 (313)
Q Consensus 102 ~~~~l-~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~ 173 (313)
+...+ ...++.+|||+|||+|..+..+++. +..+|+|+|+|+.+++.++++++..++.++++++++|+..
T Consensus 35 ~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 105 (187)
T 2fhp_A 35 IFNMIGPYFDGGMALDLYSGSGGLAIEAVSR--GMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANR 105 (187)
T ss_dssp HHHHHCSCCSSCEEEETTCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH
T ss_pred HHHHHHhhcCCCCEEEeCCccCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHH
Confidence 33444 3457899999999999999988873 3368999999999999999999999986679999999855
No 116
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.04 E-value=2.3e-09 Score=94.91 Aligned_cols=80 Identities=18% Similarity=0.324 Sum_probs=68.5
Q ss_pred EecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHc-CCCCcEEEEecCCC
Q 021397 94 GIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKY-ALGDRCRLFVADGT 172 (313)
Q Consensus 94 ~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~-g~~~~v~~~~~D~~ 172 (313)
+....+..+...+++.++++|||+|||+|..+..+++.+++.++|+++|+++.+++.++++++.. |. ++++++.+|+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~-~~v~~~~~d~~ 158 (258)
T 2pwy_A 80 TYPKDASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQV-ENVRFHLGKLE 158 (258)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCC-CCEEEEESCGG
T ss_pred ccchHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC-CCEEEEECchh
Confidence 33334456677788999999999999999999999998765689999999999999999999988 84 47999999987
Q ss_pred CC
Q 021397 173 TF 174 (313)
Q Consensus 173 ~~ 174 (313)
..
T Consensus 159 ~~ 160 (258)
T 2pwy_A 159 EA 160 (258)
T ss_dssp GC
T ss_pred hc
Confidence 65
No 117
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.03 E-value=1.2e-09 Score=95.60 Aligned_cols=82 Identities=15% Similarity=0.223 Sum_probs=65.8
Q ss_pred eEEEecHHHHHHHHhc--CCCCCCEEEEECCCcChHHHHHHHHhCC-----CcEEEEEcCCHHHHHHHHHHHHHcC----
Q 021397 91 KIYGIDAASGAAVSAL--NISAGDHVLDLCAAPGAKLCMILDIIGD-----SGSVTGVDVARHRLAACRTLLQKYA---- 159 (313)
Q Consensus 91 ~~~~Qd~ss~~~~~~l--~~~~g~~VLDlcagpG~kt~~la~~~~~-----~~~V~avD~s~~~l~~~~~~~~~~g---- 159 (313)
....|......+...+ .++++.+|||+|||+|..+..+++..+. .++|+++|+++.+++.+++++++.+
T Consensus 63 ~~~~~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ 142 (227)
T 1r18_A 63 VTISAPHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSML 142 (227)
T ss_dssp EEECCHHHHHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred CccCChHHHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCcccc
Confidence 3333444445555666 5788999999999999999999997653 3589999999999999999998876
Q ss_pred -CCCcEEEEecCCCC
Q 021397 160 -LGDRCRLFVADGTT 173 (313)
Q Consensus 160 -~~~~v~~~~~D~~~ 173 (313)
.. +++++.+|+..
T Consensus 143 ~~~-~v~~~~~d~~~ 156 (227)
T 1r18_A 143 DSG-QLLIVEGDGRK 156 (227)
T ss_dssp HHT-SEEEEESCGGG
T ss_pred CCC-ceEEEECCccc
Confidence 43 79999999865
No 118
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.03 E-value=1.1e-09 Score=95.13 Aligned_cols=112 Identities=16% Similarity=0.199 Sum_probs=81.3
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCC----CcEEEEecCCCCCCcccccccc
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALG----DRCRLFVADGTTFSLAPLRLLL 183 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~----~~v~~~~~D~~~~d~v~~D~~l 183 (313)
++++.+|||+|||+|..+..+++. ...|+++|+|+.+++.+++++...++. +++.++.+|+..++. .+..|
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~~ 102 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSF--HDSSF 102 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCS--CTTCE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCC--CCCce
Confidence 357899999999999999999986 368999999999999999998877762 368999999987653 23445
Q ss_pred CcccccccccccccccccccccchhHHHHHHHHHHHHHhhhhhccccCcceeEeecCCcEEEEEcCC
Q 021397 184 DPGSCNSVLQEKDDTFREWTSRIPWKERKRAVKARENAASKAIVRSEHPELIFYGRRSGIVGLTKEE 250 (313)
Q Consensus 184 ~~~s~sg~l~~~p~~~~~w~~~~~~~~~~~~~q~~~l~~~~~~~r~~~~El~~~~k~gG~lvysTcs 250 (313)
|.+.+..++.+.++.. ....++....+++ +|||+++.++..
T Consensus 103 D~v~~~~~l~~~~~~~---------------~~~~~l~~~~~~L-----------~pgG~l~~~~~~ 143 (235)
T 3sm3_A 103 DFAVMQAFLTSVPDPK---------------ERSRIIKEVFRVL-----------KPGAYLYLVEFG 143 (235)
T ss_dssp EEEEEESCGGGCCCHH---------------HHHHHHHHHHHHE-----------EEEEEEEEEEEB
T ss_pred eEEEEcchhhcCCCHH---------------HHHHHHHHHHHHc-----------CCCeEEEEEECC
Confidence 5556666665554420 0112333344444 459999998876
No 119
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.03 E-value=1.8e-09 Score=102.11 Aligned_cols=78 Identities=18% Similarity=0.222 Sum_probs=67.6
Q ss_pred ecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCC--cEEEEecCCC
Q 021397 95 IDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGD--RCRLFVADGT 172 (313)
Q Consensus 95 Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~--~v~~~~~D~~ 172 (313)
.|..+.++...+...++.+|||+|||+|..+..+++..+ ..+|+++|+|+.+++.+++|++.+|+.+ +++++.+|+.
T Consensus 207 ~d~~~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p-~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~ 285 (375)
T 4dcm_A 207 LDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNP-QAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 285 (375)
T ss_dssp CCHHHHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTT
T ss_pred ccHHHHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCC-CCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhh
Confidence 456777888888888889999999999999999999854 4799999999999999999999998753 4888999986
Q ss_pred C
Q 021397 173 T 173 (313)
Q Consensus 173 ~ 173 (313)
.
T Consensus 286 ~ 286 (375)
T 4dcm_A 286 S 286 (375)
T ss_dssp T
T ss_pred c
Confidence 4
No 120
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.03 E-value=1.8e-09 Score=94.98 Aligned_cols=64 Identities=14% Similarity=0.151 Sum_probs=58.0
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGT 172 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~ 172 (313)
+++|++|||+|||+|..++.+++.. ..++|+|+|+++.+++.+++|++++|+.++|++..+|+.
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~~-~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l 76 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVERG-QIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGL 76 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTT-SEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGG
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchh
Confidence 4678999999999999999999863 346899999999999999999999999878999999984
No 121
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.03 E-value=1.2e-09 Score=98.62 Aligned_cols=83 Identities=23% Similarity=0.218 Sum_probs=66.5
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccccccccCccc
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLRLLLDPGS 187 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D~~l~~~s 187 (313)
+.++.+|||+|||+|..+..+++. + ...|+|+|+|+.+++.+++++...++..++.++++|+...+.. .+..||.+.
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~fD~v~ 138 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERA-G-IGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMD-LGKEFDVIS 138 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHH-T-CSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCC-CSSCEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccC-CCCCcCEEE
Confidence 468899999999999999998876 3 3589999999999999999999888766899999999876531 234455556
Q ss_pred cccccc
Q 021397 188 CNSVLQ 193 (313)
Q Consensus 188 ~sg~l~ 193 (313)
|.++++
T Consensus 139 ~~~~l~ 144 (298)
T 1ri5_A 139 SQFSFH 144 (298)
T ss_dssp EESCGG
T ss_pred ECchhh
Confidence 666553
No 122
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.02 E-value=7.4e-10 Score=95.48 Aligned_cols=61 Identities=16% Similarity=0.126 Sum_probs=54.0
Q ss_pred CCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT 173 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~ 173 (313)
++.+|||+|||+|..+..+++.. ...|+|+|+|+.+++.+++|++..++ ++++++++|+..
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~--~~~V~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~D~~~ 114 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY--AAGATLIEMDRAVSQQLIKNLATLKA-GNARVVNSNAMS 114 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC--CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEECCHHH
Confidence 68899999999999999877652 25899999999999999999999998 479999999754
No 123
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.02 E-value=1.8e-09 Score=100.13 Aligned_cols=81 Identities=16% Similarity=0.274 Sum_probs=67.8
Q ss_pred EecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcC----------CCCc
Q 021397 94 GIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYA----------LGDR 163 (313)
Q Consensus 94 ~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g----------~~~~ 163 (313)
.....+..+...+++.+|++|||+|||+|..+..+++..+..++|+++|+++.+++.+++++++++ ..++
T Consensus 89 ~~~~~~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~ 168 (336)
T 2b25_A 89 TFPKDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDN 168 (336)
T ss_dssp CCHHHHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCC
T ss_pred cCHHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCc
Confidence 344435556677789999999999999999999999987666899999999999999999998754 2247
Q ss_pred EEEEecCCCCC
Q 021397 164 CRLFVADGTTF 174 (313)
Q Consensus 164 v~~~~~D~~~~ 174 (313)
++++.+|+...
T Consensus 169 v~~~~~d~~~~ 179 (336)
T 2b25_A 169 VDFIHKDISGA 179 (336)
T ss_dssp EEEEESCTTCC
T ss_pred eEEEECChHHc
Confidence 99999998765
No 124
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.01 E-value=1.3e-09 Score=96.53 Aligned_cols=88 Identities=13% Similarity=-0.011 Sum_probs=67.6
Q ss_pred HHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCcccccc
Q 021397 102 AVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLRL 181 (313)
Q Consensus 102 ~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D~ 181 (313)
+...+...++.+|||+|||+|..+..+++.. ...|+++|+|+.+++.+++++. ..+++++.+|+..++. .+.
T Consensus 36 l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~--~~~ 107 (253)
T 3g5l_A 36 LKKMLPDFNQKTVLDLGCGFGWHCIYAAEHG--AKKVLGIDLSERMLTEAKRKTT----SPVVCYEQKAIEDIAI--EPD 107 (253)
T ss_dssp HHTTCCCCTTCEEEEETCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHCC----CTTEEEEECCGGGCCC--CTT
T ss_pred HHHhhhccCCCEEEEECCCCCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHhhc----cCCeEEEEcchhhCCC--CCC
Confidence 3455666689999999999999999999862 2389999999999999997765 2479999999987653 234
Q ss_pred ccCccccccccccccc
Q 021397 182 LLDPGSCNSVLQEKDD 197 (313)
Q Consensus 182 ~l~~~s~sg~l~~~p~ 197 (313)
.||.+.|.+++.+.++
T Consensus 108 ~fD~v~~~~~l~~~~~ 123 (253)
T 3g5l_A 108 AYNVVLSSLALHYIAS 123 (253)
T ss_dssp CEEEEEEESCGGGCSC
T ss_pred CeEEEEEchhhhhhhh
Confidence 5565677777655443
No 125
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.01 E-value=1.4e-09 Score=98.05 Aligned_cols=84 Identities=25% Similarity=0.277 Sum_probs=66.2
Q ss_pred HHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccccc
Q 021397 101 AAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLR 180 (313)
Q Consensus 101 ~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D 180 (313)
.+...+.+.++.+|||+|||+|..+..+++ ..+.|+|+|+|+.+++.+++++ .++.++.+|+..++. +
T Consensus 48 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~---~ 115 (279)
T 3ccf_A 48 DLLQLLNPQPGEFILDLGCGTGQLTEKIAQ---SGAEVLGTDNAATMIEKARQNY------PHLHFDVADARNFRV---D 115 (279)
T ss_dssp HHHHHHCCCTTCEEEEETCTTSHHHHHHHH---TTCEEEEEESCHHHHHHHHHHC------TTSCEEECCTTTCCC---S
T ss_pred HHHHHhCCCCCCEEEEecCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHhhC------CCCEEEECChhhCCc---C
Confidence 345667788899999999999999999998 2479999999999999998764 268899999987663 4
Q ss_pred cccCcccccccccccc
Q 021397 181 LLLDPGSCNSVLQEKD 196 (313)
Q Consensus 181 ~~l~~~s~sg~l~~~p 196 (313)
..||.+.+..++...+
T Consensus 116 ~~fD~v~~~~~l~~~~ 131 (279)
T 3ccf_A 116 KPLDAVFSNAMLHWVK 131 (279)
T ss_dssp SCEEEEEEESCGGGCS
T ss_pred CCcCEEEEcchhhhCc
Confidence 4556567776665444
No 126
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.01 E-value=8.3e-10 Score=100.54 Aligned_cols=83 Identities=27% Similarity=0.322 Sum_probs=64.1
Q ss_pred HHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCC--CcEEEEecCCCCCCcc
Q 021397 100 GAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALG--DRCRLFVADGTTFSLA 177 (313)
Q Consensus 100 ~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~--~~v~~~~~D~~~~d~v 177 (313)
..+...+.+.++ +|||+|||+|..+..+++. ...|+|+|+|+.+++.+++++...++. .+++++++|+..++.
T Consensus 73 ~~~~~~~~~~~~-~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~- 147 (299)
T 3g2m_A 73 REFATRTGPVSG-PVLELAAGMGRLTFPFLDL---GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL- 147 (299)
T ss_dssp HHHHHHHCCCCS-CEEEETCTTTTTHHHHHTT---TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-
T ss_pred HHHHHhhCCCCC-cEEEEeccCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-
Confidence 334455555444 9999999999999999976 368999999999999999999887641 379999999988764
Q ss_pred ccccccCccccc
Q 021397 178 PLRLLLDPGSCN 189 (313)
Q Consensus 178 ~~D~~l~~~s~s 189 (313)
+..||.+.|+
T Consensus 148 --~~~fD~v~~~ 157 (299)
T 3g2m_A 148 --DKRFGTVVIS 157 (299)
T ss_dssp --SCCEEEEEEC
T ss_pred --CCCcCEEEEC
Confidence 4445544554
No 127
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.00 E-value=8.2e-10 Score=100.66 Aligned_cols=49 Identities=24% Similarity=0.358 Sum_probs=42.0
Q ss_pred CCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYA 159 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g 159 (313)
++.+|||+|||+|..+..+++..+. ..|+|+|+|+.+++.++++++..+
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~-~~v~gvDis~~~i~~A~~~~~~~~ 94 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGP-SRMVGLDIDSRLIHSARQNIRHYL 94 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCC-SEEEEEESCHHHHHHHHHTC----
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHhhh
Confidence 6889999999999999999998764 699999999999999999887665
No 128
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.00 E-value=8.3e-10 Score=94.64 Aligned_cols=53 Identities=15% Similarity=0.337 Sum_probs=44.2
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d 175 (313)
+++|.+|||+|||||++|..+++. .+.|+|+|+++.. ... +++++++|+...+
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~-----------~~~-~v~~~~~D~~~~~ 75 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME-----------EIA-GVRFIRCDIFKET 75 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC-----------CCT-TCEEEECCTTSSS
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc-----------cCC-CeEEEEccccCHH
Confidence 578999999999999999999986 4799999999752 233 6899999987643
No 129
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.00 E-value=2.3e-09 Score=95.02 Aligned_cols=83 Identities=11% Similarity=0.019 Sum_probs=64.7
Q ss_pred CCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccccccccCcc
Q 021397 107 NISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLRLLLDPG 186 (313)
Q Consensus 107 ~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D~~l~~~ 186 (313)
.+.++.+|||+|||+|..+..+++. ...|+|+|+|+.+++.+++++ ..+. .++.++.+|+..+++ .+..||.+
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~-~~~~-~~~~~~~~d~~~~~~--~~~~fD~v 108 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIAR---GYRYIALDADAAMLEVFRQKI-AGVD-RKVQVVQADARAIPL--PDESVHGV 108 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTT---TCEEEEEESCHHHHHHHHHHT-TTSC-TTEEEEESCTTSCCS--CTTCEEEE
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHC---CCEEEEEECCHHHHHHHHHHh-hccC-CceEEEEcccccCCC--CCCCeeEE
Confidence 5678899999999999999999875 368999999999999999887 3333 479999999987653 23445555
Q ss_pred cccccccccc
Q 021397 187 SCNSVLQEKD 196 (313)
Q Consensus 187 s~sg~l~~~p 196 (313)
.+..+++..+
T Consensus 109 ~~~~~l~~~~ 118 (263)
T 2yqz_A 109 IVVHLWHLVP 118 (263)
T ss_dssp EEESCGGGCT
T ss_pred EECCchhhcC
Confidence 6666665444
No 130
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.99 E-value=1.4e-09 Score=93.25 Aligned_cols=111 Identities=9% Similarity=0.037 Sum_probs=76.7
Q ss_pred CCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccccccccCcc
Q 021397 107 NISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLRLLLDPG 186 (313)
Q Consensus 107 ~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D~~l~~~ 186 (313)
...++.+|||+|||+|..+..++... ...|+|+|+|+.+++.++++++..+. ++.++.+|+..++. .+..||.+
T Consensus 20 ~~~~~~~vLDiGcG~G~~~~~~~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~--~~~~fD~v 93 (209)
T 2p8j_A 20 ESNLDKTVLDCGAGGDLPPLSIFVED--GYKTYGIEISDLQLKKAENFSRENNF--KLNISKGDIRKLPF--KDESMSFV 93 (209)
T ss_dssp HSSSCSEEEEESCCSSSCTHHHHHHT--TCEEEEEECCHHHHHHHHHHHHHHTC--CCCEEECCTTSCCS--CTTCEEEE
T ss_pred ccCCCCEEEEECCCCCHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEECchhhCCC--CCCceeEE
Confidence 35678999999999999865555443 36899999999999999999988774 68899999987653 13344544
Q ss_pred cccccccccccccccccccchhHHHHHHHHHHHHHhhhhhccccCcceeEeecCCcEEEEEcCC
Q 021397 187 SCNSVLQEKDDTFREWTSRIPWKERKRAVKARENAASKAIVRSEHPELIFYGRRSGIVGLTKEE 250 (313)
Q Consensus 187 s~sg~l~~~p~~~~~w~~~~~~~~~~~~~q~~~l~~~~~~~r~~~~El~~~~k~gG~lvysTcs 250 (313)
.+.+++.+.+. ......+....+.+ +|||.++.++.+
T Consensus 94 ~~~~~l~~~~~----------------~~~~~~l~~~~~~L-----------kpgG~l~~~~~~ 130 (209)
T 2p8j_A 94 YSYGTIFHMRK----------------NDVKEAIDEIKRVL-----------KPGGLACINFLT 130 (209)
T ss_dssp EECSCGGGSCH----------------HHHHHHHHHHHHHE-----------EEEEEEEEEEEE
T ss_pred EEcChHHhCCH----------------HHHHHHHHHHHHHc-----------CCCcEEEEEEec
Confidence 66555543210 00112233334444 559999999887
No 131
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.99 E-value=3.1e-09 Score=93.76 Aligned_cols=65 Identities=14% Similarity=0.212 Sum_probs=58.7
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT 173 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~ 173 (313)
+++|++|||+|||+|..++.+++. +...+|+|+|+++.+++.+++|++++|+.++|++..+|+..
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~ 83 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQM-GYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLS 83 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHT-TCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGG
T ss_pred CCCCCEEEEECCchHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhh
Confidence 567899999999999999999986 33468999999999999999999999998789999999854
No 132
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.98 E-value=1.6e-09 Score=93.66 Aligned_cols=109 Identities=14% Similarity=0.136 Sum_probs=78.2
Q ss_pred HhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCcccccccc
Q 021397 104 SALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLRLLL 183 (313)
Q Consensus 104 ~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D~~l 183 (313)
..+.+.++.+|||+|||+|..+..+++. ...|+|+|+|+.+++.+++++. .+++++.+|+..++.. ..|
T Consensus 39 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~d~~~~~~~---~~f 107 (220)
T 3hnr_A 39 EDVVNKSFGNVLEFGVGTGNLTNKLLLA---GRTVYGIEPSREMRMIAKEKLP-----KEFSITEGDFLSFEVP---TSI 107 (220)
T ss_dssp HHHHHTCCSEEEEECCTTSHHHHHHHHT---TCEEEEECSCHHHHHHHHHHSC-----TTCCEESCCSSSCCCC---SCC
T ss_pred HHhhccCCCeEEEeCCCCCHHHHHHHhC---CCeEEEEeCCHHHHHHHHHhCC-----CceEEEeCChhhcCCC---CCe
Confidence 3344568899999999999999999986 3689999999999999997754 3688999999876542 345
Q ss_pred CcccccccccccccccccccccchhHHHHHHHHHHHHHhhhhhccccCcceeEeecCCcEEEEEcCC
Q 021397 184 DPGSCNSVLQEKDDTFREWTSRIPWKERKRAVKARENAASKAIVRSEHPELIFYGRRSGIVGLTKEE 250 (313)
Q Consensus 184 ~~~s~sg~l~~~p~~~~~w~~~~~~~~~~~~~q~~~l~~~~~~~r~~~~El~~~~k~gG~lvysTcs 250 (313)
|.+.|.+++.+.++.. ...++....+.+ ||||.++.++..
T Consensus 108 D~v~~~~~l~~~~~~~----------------~~~~l~~~~~~L-----------kpgG~l~i~~~~ 147 (220)
T 3hnr_A 108 DTIVSTYAFHHLTDDE----------------KNVAIAKYSQLL-----------NKGGKIVFADTI 147 (220)
T ss_dssp SEEEEESCGGGSCHHH----------------HHHHHHHHHHHS-----------CTTCEEEEEEEC
T ss_pred EEEEECcchhcCChHH----------------HHHHHHHHHHhc-----------CCCCEEEEEecc
Confidence 5556777665544320 012233334444 559999998765
No 133
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.98 E-value=1.3e-09 Score=98.16 Aligned_cols=57 Identities=19% Similarity=0.107 Sum_probs=49.0
Q ss_pred HHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHc
Q 021397 99 SGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKY 158 (313)
Q Consensus 99 s~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~ 158 (313)
...+...+.+.+|.+|||+|||+|..+..+++. ...|+|+|+|+.|++.++++++..
T Consensus 34 ~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~---g~~V~gvD~S~~ml~~Ar~~~~~~ 90 (261)
T 3iv6_A 34 RENDIFLENIVPGSTVAVIGASTRFLIEKALER---GASVTVFDFSQRMCDDLAEALADR 90 (261)
T ss_dssp HHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTSSS
T ss_pred HHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHhc
Confidence 344566778899999999999999999999985 368999999999999999887544
No 134
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.98 E-value=2.9e-09 Score=92.88 Aligned_cols=65 Identities=23% Similarity=0.334 Sum_probs=57.4
Q ss_pred CCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 107 NISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 107 ~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.+.++++|||+|||+|..+..+++..+..+.|+|+|+|+.+++.+++++++. .+++++.+|+...
T Consensus 70 ~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~---~~v~~~~~d~~~~ 134 (227)
T 1g8a_A 70 PIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER---RNIVPILGDATKP 134 (227)
T ss_dssp CCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC---TTEEEEECCTTCG
T ss_pred CCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc---CCCEEEEccCCCc
Confidence 3778999999999999999999998865689999999999999999988765 3799999998763
No 135
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.97 E-value=3.2e-09 Score=93.70 Aligned_cols=87 Identities=15% Similarity=0.042 Sum_probs=67.1
Q ss_pred HHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCcccccc
Q 021397 102 AVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLRL 181 (313)
Q Consensus 102 ~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D~ 181 (313)
....+...++.+|||+|||+|..+..+++.. ...|+++|+|+.+++.+++++... .++.++.+|+..++. .+.
T Consensus 85 ~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~--~~~ 157 (254)
T 1xtp_A 85 FIASLPGHGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGM---PVGKFILASMETATL--PPN 157 (254)
T ss_dssp HHHTSTTCCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTS---SEEEEEESCGGGCCC--CSS
T ss_pred HHHhhcccCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccC---CceEEEEccHHHCCC--CCC
Confidence 3445566788999999999999999999875 358999999999999999887554 379999999877653 233
Q ss_pred ccCccccccccccc
Q 021397 182 LLDPGSCNSVLQEK 195 (313)
Q Consensus 182 ~l~~~s~sg~l~~~ 195 (313)
.||.+.|..++.+.
T Consensus 158 ~fD~v~~~~~l~~~ 171 (254)
T 1xtp_A 158 TYDLIVIQWTAIYL 171 (254)
T ss_dssp CEEEEEEESCGGGS
T ss_pred CeEEEEEcchhhhC
Confidence 45555666666544
No 136
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.96 E-value=2.4e-09 Score=101.75 Aligned_cols=75 Identities=15% Similarity=0.116 Sum_probs=61.9
Q ss_pred HHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHH-------HHcCCC-CcEEEEecCCC
Q 021397 101 AAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLL-------QKYALG-DRCRLFVADGT 172 (313)
Q Consensus 101 ~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~-------~~~g~~-~~v~~~~~D~~ 172 (313)
.+...+.+++|++|||+|||+|..++.+|...+ ..+|+|+|+++.+++.+++++ +.+|+. ++|+++++|+.
T Consensus 164 ~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g-~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~ 242 (438)
T 3uwp_A 164 QMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATN-CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFL 242 (438)
T ss_dssp HHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTT
T ss_pred HHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECccc
Confidence 355667899999999999999999999998764 357999999999999998765 345652 58999999998
Q ss_pred CCCc
Q 021397 173 TFSL 176 (313)
Q Consensus 173 ~~d~ 176 (313)
.+++
T Consensus 243 ~lp~ 246 (438)
T 3uwp_A 243 SEEW 246 (438)
T ss_dssp SHHH
T ss_pred CCcc
Confidence 7654
No 137
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.96 E-value=2e-09 Score=98.87 Aligned_cols=113 Identities=12% Similarity=0.013 Sum_probs=73.4
Q ss_pred CCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCC-----cEEEEecCCCC------CCccc
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGD-----RCRLFVADGTT------FSLAP 178 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~-----~v~~~~~D~~~------~d~v~ 178 (313)
+|.+|||+|||+|+.+..++.. +.+.|+|+|+|+.|++.|+++....+... ++++.+.|+.. ++...
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~--~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG--EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CCCeEEEEecCCcHhHHHHHhc--CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc
Confidence 5889999999999877665542 23689999999999999999887776421 25677777632 11111
Q ss_pred cccccCcccccccccccccccccccccchhHHHHHHHHHHHHHhhhhhccccCcceeEeecCCcEEEEEcCC
Q 021397 179 LRLLLDPGSCNSVLQEKDDTFREWTSRIPWKERKRAVKARENAASKAIVRSEHPELIFYGRRSGIVGLTKEE 250 (313)
Q Consensus 179 ~D~~l~~~s~sg~l~~~p~~~~~w~~~~~~~~~~~~~q~~~l~~~~~~~r~~~~El~~~~k~gG~lvysTcs 250 (313)
.+..||.++|..+++.. |.... +..++....+++ ||||+++.+|..
T Consensus 126 ~~~~FD~V~~~~~lhy~------~~~~~---------~~~~l~~~~r~L-----------kpGG~~i~~~~~ 171 (302)
T 2vdw_A 126 YFGKFNIIDWQFAIHYS------FHPRH---------YATVMNNLSELT-----------ASGGKVLITTMD 171 (302)
T ss_dssp CSSCEEEEEEESCGGGT------CSTTT---------HHHHHHHHHHHE-----------EEEEEEEEEEEC
T ss_pred cCCCeeEEEECchHHHh------CCHHH---------HHHHHHHHHHHc-----------CCCCEEEEEeCC
Confidence 23456666887766431 11110 023344445555 459999998875
No 138
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.95 E-value=7.1e-09 Score=92.21 Aligned_cols=65 Identities=9% Similarity=0.188 Sum_probs=58.5
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT 173 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~ 173 (313)
+.+|++|||+|||+|..++.+++. +....|+|+|+++.+++.+++|++++|+.++|++..+|+..
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~ 83 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKN-QTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLA 83 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGG
T ss_pred CCCCCEEEEECCccHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhh
Confidence 567899999999999999999986 33468999999999999999999999998789999999754
No 139
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.95 E-value=2.8e-09 Score=93.36 Aligned_cols=88 Identities=20% Similarity=0.128 Sum_probs=66.1
Q ss_pred HHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccccc
Q 021397 101 AAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLR 180 (313)
Q Consensus 101 ~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D 180 (313)
.+...+...++.+|||+|||+|..+..+++. + ...|+++|+|+.+++.+++++.. .++.++.+|+..++. .+
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~~--~~ 105 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEH-G-ASYVLGLDLSEKMLARARAAGPD----TGITYERADLDKLHL--PQ 105 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHTSCS----SSEEEEECCGGGCCC--CT
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHC-C-CCeEEEEcCCHHHHHHHHHhccc----CCceEEEcChhhccC--CC
Confidence 4556777778999999999999999999886 2 23899999999999999876532 268999999877653 23
Q ss_pred cccCcccccccccccc
Q 021397 181 LLLDPGSCNSVLQEKD 196 (313)
Q Consensus 181 ~~l~~~s~sg~l~~~p 196 (313)
..||.+.+..++.+.+
T Consensus 106 ~~fD~v~~~~~l~~~~ 121 (243)
T 3bkw_A 106 DSFDLAYSSLALHYVE 121 (243)
T ss_dssp TCEEEEEEESCGGGCS
T ss_pred CCceEEEEeccccccc
Confidence 3455556666665443
No 140
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.95 E-value=3.7e-09 Score=91.60 Aligned_cols=76 Identities=20% Similarity=0.199 Sum_probs=60.2
Q ss_pred CCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccccccccCcccc
Q 021397 109 SAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLRLLLDPGSC 188 (313)
Q Consensus 109 ~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D~~l~~~s~ 188 (313)
.++.+|||+|||+|..+..+++.. .+|+++|+|+.+++.++++++..+. +++++.+|+..++. .+..||.+.+
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~--~~~~~D~v~~ 109 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYG---FEVVGVDISEDMIRKAREYAKSRES--NVEFIVGDARKLSF--EDKTFDYVIF 109 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTC--CCEEEECCTTSCCS--CTTCEEEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHhcCC--CceEEECchhcCCC--CCCcEEEEEE
Confidence 458899999999999999998863 3899999999999999999988873 79999999877653 1233444455
Q ss_pred ccc
Q 021397 189 NSV 191 (313)
Q Consensus 189 sg~ 191 (313)
...
T Consensus 110 ~~~ 112 (227)
T 1ve3_A 110 IDS 112 (227)
T ss_dssp ESC
T ss_pred cCc
Confidence 554
No 141
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.95 E-value=6.6e-09 Score=91.73 Aligned_cols=65 Identities=18% Similarity=0.210 Sum_probs=56.9
Q ss_pred cCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 021397 106 LNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 106 l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d 175 (313)
+...++.+|||+|||+|..+..+++. ...|+|+|+|+.+++.+++++...+. ++.++++|+..++
T Consensus 37 ~~~~~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~--~v~~~~~d~~~~~ 101 (252)
T 1wzn_A 37 DAKREVRRVLDLACGTGIPTLELAER---GYEVVGLDLHEEMLRVARRKAKERNL--KIEFLQGDVLEIA 101 (252)
T ss_dssp TCSSCCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC--CCEEEESCGGGCC
T ss_pred hcccCCCEEEEeCCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEECChhhcc
Confidence 34567889999999999999999985 36899999999999999999988886 6899999998765
No 142
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.94 E-value=2.3e-09 Score=100.02 Aligned_cols=76 Identities=20% Similarity=0.161 Sum_probs=64.7
Q ss_pred cHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 96 DAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 96 d~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
|..+.++...+.+.++.+|||+|||+|..+..+++..+ ..+|+++|+|+.+++.++++++..++. ++++.+|+..+
T Consensus 182 d~~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~--~~~~~~d~~~~ 257 (343)
T 2pjd_A 182 DVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSP-KIRLTLCDVSAPAVEASRATLAANGVE--GEVFASNVFSE 257 (343)
T ss_dssp CHHHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCT-TCBCEEEESBHHHHHHHHHHHHHTTCC--CEEEECSTTTT
T ss_pred cHHHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhCCC--CEEEEcccccc
Confidence 45677788888777888999999999999999998753 368999999999999999999998873 67788888653
No 143
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.94 E-value=1.7e-09 Score=94.68 Aligned_cols=79 Identities=14% Similarity=0.054 Sum_probs=62.1
Q ss_pred CCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccccccccCcccccc
Q 021397 111 GDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLRLLLDPGSCNS 190 (313)
Q Consensus 111 g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D~~l~~~s~sg 190 (313)
+.+|||+|||+|..+..+++ ....|+|+|+|+.+++.+++++...+...+++++.+|+..++. +..||.+.+.+
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---~~~fD~v~~~~ 140 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMAS---PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRP---TELFDLIFDYV 140 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCB---TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCC---SSCEEEEEEES
T ss_pred CCCEEEeCCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCC---CCCeeEEEECh
Confidence 45999999999999998876 3468999999999999999998876554579999999987652 33455556666
Q ss_pred ccccc
Q 021397 191 VLQEK 195 (313)
Q Consensus 191 ~l~~~ 195 (313)
++...
T Consensus 141 ~l~~~ 145 (235)
T 3lcc_A 141 FFCAI 145 (235)
T ss_dssp STTTS
T ss_pred hhhcC
Confidence 66543
No 144
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.94 E-value=4.3e-09 Score=92.28 Aligned_cols=64 Identities=17% Similarity=0.226 Sum_probs=56.6
Q ss_pred cCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 021397 106 LNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT 173 (313)
Q Consensus 106 l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~ 173 (313)
+.++++.+|||+|||+|..+..+++..+ .+.|+|+|+|+.+++.++++++.. .++.++.+|+..
T Consensus 70 ~~~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~ 133 (230)
T 1fbn_A 70 MPIKRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAER---ENIIPILGDANK 133 (230)
T ss_dssp CCCCTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTC---TTEEEEECCTTC
T ss_pred cCCCCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcC---CCeEEEECCCCC
Confidence 4567899999999999999999999876 579999999999999999987655 379999999876
No 145
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.94 E-value=5.8e-09 Score=89.35 Aligned_cols=64 Identities=16% Similarity=0.180 Sum_probs=57.7
Q ss_pred CCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d 175 (313)
++.+|||+|||+|..+..++...+ ..+|+++|+|+.+++.++++++..++. +++++.+|+..+.
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~ 128 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRP-EAHFTLLDSLGKRVRFLRQVQHELKLE-NIEPVQSRVEEFP 128 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTCS-SEEEEECCTTTSC
T ss_pred CCCeEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEecchhhCC
Confidence 478999999999999999998864 479999999999999999999999986 5999999997754
No 146
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.94 E-value=1.4e-09 Score=99.96 Aligned_cols=70 Identities=21% Similarity=0.309 Sum_probs=62.2
Q ss_pred HHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 021397 101 AAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT 173 (313)
Q Consensus 101 ~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~ 173 (313)
.+...+.+++|.+|||+|||+|+.|..+++..+ .++|+|+|+|+.+++.++++++.+| ++++++++|+..
T Consensus 17 e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g--~~v~~v~~d~~~ 86 (301)
T 1m6y_A 17 EVIEFLKPEDEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFS--DRVSLFKVSYRE 86 (301)
T ss_dssp HHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGT--TTEEEEECCGGG
T ss_pred HHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCHHH
Confidence 355677889999999999999999999999875 4799999999999999999998888 379999999853
No 147
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.93 E-value=4.7e-09 Score=91.81 Aligned_cols=78 Identities=18% Similarity=0.161 Sum_probs=62.6
Q ss_pred CCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccccccccCccccc
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLRLLLDPGSCN 189 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D~~l~~~s~s 189 (313)
++.+|||+|||+|..+..+++. ...|+++|+|+.+++.+++++...+. ++.++++|+..++.. ..||.+.|.
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~---~~fD~v~~~ 108 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK---FKNTWAVDLSQEMLSEAENKFRSQGL--KPRLACQDISNLNIN---RKFDLITCC 108 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG---SSEEEEECSCHHHHHHHHHHHHHTTC--CCEEECCCGGGCCCS---CCEEEEEEC
T ss_pred CCCeEEEeCCCCCHHHHHHHHC---CCcEEEEECCHHHHHHHHHHHhhcCC--CeEEEecccccCCcc---CCceEEEEc
Confidence 7889999999999999999876 25899999999999999999988876 689999998776532 334444665
Q ss_pred c-ccccc
Q 021397 190 S-VLQEK 195 (313)
Q Consensus 190 g-~l~~~ 195 (313)
. ++.+.
T Consensus 109 ~~~l~~~ 115 (246)
T 1y8c_A 109 LDSTNYI 115 (246)
T ss_dssp TTGGGGC
T ss_pred Ccccccc
Confidence 5 55443
No 148
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.93 E-value=6.1e-09 Score=98.68 Aligned_cols=74 Identities=27% Similarity=0.249 Sum_probs=60.7
Q ss_pred cHHHHHHHHhc------CCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEec
Q 021397 96 DAASGAAVSAL------NISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVA 169 (313)
Q Consensus 96 d~ss~~~~~~l------~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~ 169 (313)
|..+.++...+ ...++.+|||+|||+|..+..+++. ..+|+++|+|+.+++.+++|++.+++ +++++.+
T Consensus 213 d~~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~---g~~V~gvDis~~al~~A~~n~~~~~~--~v~~~~~ 287 (381)
T 3dmg_A 213 DPASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARM---GAEVVGVEDDLASVLSLQKGLEANAL--KAQALHS 287 (381)
T ss_dssp CHHHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHT---TCEEEEEESBHHHHHHHHHHHHHTTC--CCEEEEC
T ss_pred CHHHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCC--CeEEEEc
Confidence 45555544443 2347889999999999999999986 36999999999999999999999987 4899999
Q ss_pred CCCCC
Q 021397 170 DGTTF 174 (313)
Q Consensus 170 D~~~~ 174 (313)
|+..+
T Consensus 288 D~~~~ 292 (381)
T 3dmg_A 288 DVDEA 292 (381)
T ss_dssp STTTT
T ss_pred chhhc
Confidence 98654
No 149
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.93 E-value=5.5e-09 Score=106.44 Aligned_cols=93 Identities=20% Similarity=0.319 Sum_probs=73.5
Q ss_pred HHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHc------CCCCcEEEEecCCCCCC
Q 021397 102 AVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKY------ALGDRCRLFVADGTTFS 175 (313)
Q Consensus 102 ~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~------g~~~~v~~~~~D~~~~d 175 (313)
+...+...++.+|||+|||+|..+..+++..++...|+|+|+|+.+++.++++++.. ++. +++++++|+..++
T Consensus 713 LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~-nVefiqGDa~dLp 791 (950)
T 3htx_A 713 ALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVK-SATLYDGSILEFD 791 (950)
T ss_dssp HHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCS-EEEEEESCTTSCC
T ss_pred HHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCC-ceEEEECchHhCC
Confidence 445556668999999999999999999986533469999999999999999977643 554 7999999998876
Q ss_pred ccccccccCccccccccccccc
Q 021397 176 LAPLRLLLDPGSCNSVLQEKDD 197 (313)
Q Consensus 176 ~v~~D~~l~~~s~sg~l~~~p~ 197 (313)
. .+..||.+.|..++.+.++
T Consensus 792 ~--~d~sFDlVV~~eVLeHL~d 811 (950)
T 3htx_A 792 S--RLHDVDIGTCLEVIEHMEE 811 (950)
T ss_dssp T--TSCSCCEEEEESCGGGSCH
T ss_pred c--ccCCeeEEEEeCchhhCCh
Confidence 5 2455666688888876554
No 150
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.92 E-value=1e-09 Score=96.52 Aligned_cols=63 Identities=8% Similarity=-0.025 Sum_probs=54.0
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
++++.+|||+|||+|..+..+++. + ...|+++|+|+.+++.++++++..+. +++++.+|+..+
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~--~v~~~~~d~~~~ 120 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEA-P-IDEHWIIECNDGVFQRLRDWAPRQTH--KVIPLKGLWEDV 120 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTS-C-EEEEEEEECCHHHHHHHHHHGGGCSS--EEEEEESCHHHH
T ss_pred CCCCCeEEEEeccCCHHHHHHHhc-C-CCeEEEEcCCHHHHHHHHHHHHhcCC--CeEEEecCHHHh
Confidence 578899999999999999999753 2 24899999999999999999887773 799999998654
No 151
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.92 E-value=2.5e-09 Score=95.55 Aligned_cols=88 Identities=14% Similarity=0.102 Sum_probs=68.1
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCcc
Q 021397 98 ASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLA 177 (313)
Q Consensus 98 ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v 177 (313)
-...+...+.+.++.+|||+|||+|..+..+++ ...+|+|+|+|+.+++.++++. +++++.+|+..++.
T Consensus 22 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~d~~~~~~- 90 (261)
T 3ege_A 22 IVNAIINLLNLPKGSVIADIGAGTGGYSVALAN---QGLFVYAVEPSIVMRQQAVVHP-------QVEWFTGYAENLAL- 90 (261)
T ss_dssp HHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHT---TTCEEEEECSCHHHHHSSCCCT-------TEEEECCCTTSCCS-
T ss_pred HHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHh---CCCEEEEEeCCHHHHHHHHhcc-------CCEEEECchhhCCC-
Confidence 345566677788899999999999999999997 2479999999999998776543 68999999987663
Q ss_pred ccccccCccccccccccccc
Q 021397 178 PLRLLLDPGSCNSVLQEKDD 197 (313)
Q Consensus 178 ~~D~~l~~~s~sg~l~~~p~ 197 (313)
.+..||.+.|..++.+.++
T Consensus 91 -~~~~fD~v~~~~~l~~~~~ 109 (261)
T 3ege_A 91 -PDKSVDGVISILAIHHFSH 109 (261)
T ss_dssp -CTTCBSEEEEESCGGGCSS
T ss_pred -CCCCEeEEEEcchHhhccC
Confidence 2455666677777765443
No 152
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.92 E-value=4e-09 Score=98.34 Aligned_cols=72 Identities=21% Similarity=0.205 Sum_probs=61.2
Q ss_pred HHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCc
Q 021397 102 AVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSL 176 (313)
Q Consensus 102 ~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~ 176 (313)
+...+...++.+|||+|||+|..+..+++. + ..+|+|+|+|+ +++.++++++..|+.++++++.+|+..++.
T Consensus 56 i~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~ 127 (340)
T 2fyt_A 56 IYQNPHIFKDKVVLDVGCGTGILSMFAAKA-G-AKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHL 127 (340)
T ss_dssp HHHCGGGTTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCC
T ss_pred HHhhhhhcCCCEEEEeeccCcHHHHHHHHc-C-CCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcC
Confidence 334455678999999999999999999886 3 35899999996 999999999999986689999999987653
No 153
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.92 E-value=3.8e-09 Score=90.87 Aligned_cols=77 Identities=16% Similarity=0.067 Sum_probs=60.7
Q ss_pred CCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccccccccCcc
Q 021397 107 NISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLRLLLDPG 186 (313)
Q Consensus 107 ~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D~~l~~~ 186 (313)
.+.++.+|||+|||+|..+..+++. ...|+|+|+|+.+++.+++++ ++.++.+|+..++ .+..||.+
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~d~~~~~---~~~~fD~v 106 (211)
T 3e23_A 40 ELPAGAKILELGCGAGYQAEAMLAA---GFDVDATDGSPELAAEASRRL-------GRPVRTMLFHQLD---AIDAYDAV 106 (211)
T ss_dssp TSCTTCEEEESSCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHH-------TSCCEECCGGGCC---CCSCEEEE
T ss_pred hcCCCCcEEEECCCCCHHHHHHHHc---CCeEEEECCCHHHHHHHHHhc-------CCceEEeeeccCC---CCCcEEEE
Confidence 3567899999999999999999986 368999999999999999886 3557788887766 34556666
Q ss_pred cccccccccc
Q 021397 187 SCNSVLQEKD 196 (313)
Q Consensus 187 s~sg~l~~~p 196 (313)
.|.+++.+.+
T Consensus 107 ~~~~~l~~~~ 116 (211)
T 3e23_A 107 WAHACLLHVP 116 (211)
T ss_dssp EECSCGGGSC
T ss_pred EecCchhhcC
Confidence 7777665543
No 154
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.92 E-value=3.5e-09 Score=93.15 Aligned_cols=82 Identities=18% Similarity=0.058 Sum_probs=63.5
Q ss_pred CCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccccccccCccccc
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLRLLLDPGSCN 189 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D~~l~~~s~s 189 (313)
++.+|||+|||+|..+..+++.. ...|+++|+|+.+++.+++++...+. .++.++.+|+..++.. +..||.+.+.
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~~~--~~~fD~v~~~ 153 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEGK-RVRNYFCCGLQDFTPE--PDSYDVIWIQ 153 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGGG-GEEEEEECCGGGCCCC--SSCEEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcCC-ceEEEEEcChhhcCCC--CCCEEEEEEc
Confidence 68899999999999999988764 35899999999999999999877653 3689999998766532 2345555666
Q ss_pred ccccccc
Q 021397 190 SVLQEKD 196 (313)
Q Consensus 190 g~l~~~p 196 (313)
.++.+.+
T Consensus 154 ~~l~~~~ 160 (241)
T 2ex4_A 154 WVIGHLT 160 (241)
T ss_dssp SCGGGSC
T ss_pred chhhhCC
Confidence 6665444
No 155
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.92 E-value=6.8e-09 Score=90.90 Aligned_cols=105 Identities=12% Similarity=0.140 Sum_probs=77.4
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccccccccCccc
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLRLLLDPGS 187 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D~~l~~~s 187 (313)
+.++.+|||+|||+|..+..+++. ...|+|+|+|+.+++.++++. . ..+++++.+|+..++. .+..||.+.
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~---~-~~~~~~~~~d~~~~~~--~~~~fD~v~ 121 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRT---GYKAVGVDISEVMIQKGKERG---E-GPDLSFIKGDLSSLPF--ENEQFEAIM 121 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHTTT---C-BTTEEEEECBTTBCSS--CTTCEEEEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhc---c-cCCceEEEcchhcCCC--CCCCccEEE
Confidence 357889999999999999999986 368999999999999998764 2 2479999999987663 244556667
Q ss_pred ccccccccccccccccccchhHHHHHHHHHHHHHhhhhhccccCcceeEeecCCcEEEEEcCC
Q 021397 188 CNSVLQEKDDTFREWTSRIPWKERKRAVKARENAASKAIVRSEHPELIFYGRRSGIVGLTKEE 250 (313)
Q Consensus 188 ~sg~l~~~p~~~~~w~~~~~~~~~~~~~q~~~l~~~~~~~r~~~~El~~~~k~gG~lvysTcs 250 (313)
|..++.+.++. ..++....+.+ +|||+++.++..
T Consensus 122 ~~~~l~~~~~~------------------~~~l~~~~~~L-----------~pgG~l~i~~~~ 155 (242)
T 3l8d_A 122 AINSLEWTEEP------------------LRALNEIKRVL-----------KSDGYACIAILG 155 (242)
T ss_dssp EESCTTSSSCH------------------HHHHHHHHHHE-----------EEEEEEEEEEEC
T ss_pred EcChHhhccCH------------------HHHHHHHHHHh-----------CCCeEEEEEEcC
Confidence 77777655442 11223334444 559999998865
No 156
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.92 E-value=1.9e-08 Score=88.38 Aligned_cols=76 Identities=21% Similarity=0.313 Sum_probs=66.0
Q ss_pred cHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 96 DAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 96 d~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
...+..+...+++.+|++|||+|||+|..+..+++. .++|+++|+++.+++.++++++.+++..+++++.+|+...
T Consensus 77 ~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 152 (248)
T 2yvl_A 77 PKDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDA 152 (248)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTS
T ss_pred chhHHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhc
Confidence 344456677788899999999999999999999997 3799999999999999999999999866899999998653
No 157
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.92 E-value=1.8e-08 Score=94.13 Aligned_cols=93 Identities=13% Similarity=0.053 Sum_probs=72.7
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCc
Q 021397 97 AASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSL 176 (313)
Q Consensus 97 ~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~ 176 (313)
.....+...++..++.+|||+|||+|..+..+++..+ ..+++++|+ +.+++.+++++++.++.++++++.+|+...+.
T Consensus 177 ~~~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 254 (359)
T 1x19_A 177 FAIQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFP-ELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESY 254 (359)
T ss_dssp HHHHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCT-TCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCC
T ss_pred hhHHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCC-CCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCC
Confidence 3344556667778889999999999999999999865 469999999 99999999999999987679999999876543
Q ss_pred cccccccCccccccccccc
Q 021397 177 APLRLLLDPGSCNSVLQEK 195 (313)
Q Consensus 177 v~~D~~l~~~s~sg~l~~~ 195 (313)
... |.+.+..+++..
T Consensus 255 ~~~----D~v~~~~vlh~~ 269 (359)
T 1x19_A 255 PEA----DAVLFCRILYSA 269 (359)
T ss_dssp CCC----SEEEEESCGGGS
T ss_pred CCC----CEEEEechhccC
Confidence 222 333555555443
No 158
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.91 E-value=4.2e-09 Score=94.23 Aligned_cols=84 Identities=13% Similarity=0.038 Sum_probs=60.8
Q ss_pred cCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHH----------c------CCCCcEEEEec
Q 021397 106 LNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQK----------Y------ALGDRCRLFVA 169 (313)
Q Consensus 106 l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~----------~------g~~~~v~~~~~ 169 (313)
+.+.++.+|||+|||+|..+..|++. +..|+|+|+|+.+++.++++... . ....+++++++
T Consensus 64 ~~~~~~~~vLD~GCG~G~~~~~La~~---G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 140 (252)
T 2gb4_A 64 LKGQSGLRVFFPLCGKAIEMKWFADR---GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCC 140 (252)
T ss_dssp HTTCCSCEEEETTCTTCTHHHHHHHT---TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEES
T ss_pred ccCCCCCeEEEeCCCCcHHHHHHHHC---CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEEC
Confidence 34568899999999999999999985 25899999999999999765421 0 01137999999
Q ss_pred CCCCCCccccc-cccCcccccccccc
Q 021397 170 DGTTFSLAPLR-LLLDPGSCNSVLQE 194 (313)
Q Consensus 170 D~~~~d~v~~D-~~l~~~s~sg~l~~ 194 (313)
|+..++.. + ..||.+.+.+++..
T Consensus 141 D~~~l~~~--~~~~FD~V~~~~~l~~ 164 (252)
T 2gb4_A 141 SIFDLPRA--NIGKFDRIWDRGALVA 164 (252)
T ss_dssp CTTTGGGG--CCCCEEEEEESSSTTT
T ss_pred ccccCCcc--cCCCEEEEEEhhhhhh
Confidence 99876542 2 34444455555543
No 159
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.91 E-value=2.3e-09 Score=91.47 Aligned_cols=62 Identities=24% Similarity=0.392 Sum_probs=54.6
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d 175 (313)
..++ +|||+|||+|..+..+++. ...|+++|+|+.+++.+++++...+. ++.++.+|+..++
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~ 89 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASL---GYEVTAVDQSSVGLAKAKQLAQEKGV--KITTVQSNLADFD 89 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTT---TCEEEEECSSHHHHHHHHHHHHHHTC--CEEEECCBTTTBS
T ss_pred CCCC-CEEEECCCCCHhHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcChhhcC
Confidence 3567 9999999999999998875 35899999999999999999998887 6999999987765
No 160
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.91 E-value=2.2e-09 Score=93.86 Aligned_cols=79 Identities=15% Similarity=0.134 Sum_probs=62.4
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccccccccCccc
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLRLLLDPGS 187 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D~~l~~~s 187 (313)
..++.+|||+|||+|..+..+++.. ..|+|+|+|+.+++.+++++.. +++++++|+..+. .+..||.+.
T Consensus 40 ~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~-----~v~~~~~d~~~~~---~~~~fD~v~ 108 (250)
T 2p7i_A 40 FFRPGNLLELGSFKGDFTSRLQEHF---NDITCVEASEEAISHAQGRLKD-----GITYIHSRFEDAQ---LPRRYDNIV 108 (250)
T ss_dssp GCCSSCEEEESCTTSHHHHHHTTTC---SCEEEEESCHHHHHHHHHHSCS-----CEEEEESCGGGCC---CSSCEEEEE
T ss_pred hcCCCcEEEECCCCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhhhC-----CeEEEEccHHHcC---cCCcccEEE
Confidence 3577899999999999999998752 4799999999999999877532 6899999987762 345566668
Q ss_pred cccccccccc
Q 021397 188 CNSVLQEKDD 197 (313)
Q Consensus 188 ~sg~l~~~p~ 197 (313)
|..++.+.++
T Consensus 109 ~~~~l~~~~~ 118 (250)
T 2p7i_A 109 LTHVLEHIDD 118 (250)
T ss_dssp EESCGGGCSS
T ss_pred EhhHHHhhcC
Confidence 8887776554
No 161
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.90 E-value=1.4e-09 Score=96.16 Aligned_cols=79 Identities=16% Similarity=0.117 Sum_probs=59.6
Q ss_pred CeEEEe-cHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHH---hCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEE
Q 021397 90 GKIYGI-DAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDI---IGDSGSVTGVDVARHRLAACRTLLQKYALGDRCR 165 (313)
Q Consensus 90 G~~~~Q-d~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~---~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~ 165 (313)
|....| .....++..++...++.+|||+|||+|+.|..+++. +++.++|+|+|+|+.+++.++ ++.++++
T Consensus 60 ~~~~~~~p~~~~~l~~~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~------~~~~~v~ 133 (236)
T 2bm8_A 60 GLRMLKDPDTQAVYHDMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA------SDMENIT 133 (236)
T ss_dssp TEECCSCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG------GGCTTEE
T ss_pred cccccCCHHHHHHHHHHHHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh------ccCCceE
Confidence 334445 333344445555556789999999999999999997 455689999999999998776 1224799
Q ss_pred EEecCCCCC
Q 021397 166 LFVADGTTF 174 (313)
Q Consensus 166 ~~~~D~~~~ 174 (313)
++++|+..+
T Consensus 134 ~~~gD~~~~ 142 (236)
T 2bm8_A 134 LHQGDCSDL 142 (236)
T ss_dssp EEECCSSCS
T ss_pred EEECcchhH
Confidence 999999875
No 162
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.90 E-value=6.1e-09 Score=91.11 Aligned_cols=61 Identities=20% Similarity=0.309 Sum_probs=53.8
Q ss_pred CCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 021397 109 SAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 109 ~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d 175 (313)
.++.+|||+|||+|..+..+++. ..|+++|+|+.+++.+++++...+. +++++.+|+..++
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~ 92 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETNR--HVDFWVQDMRELE 92 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTTC--CCEEEECCGGGCC
T ss_pred CCCCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcCC--ceEEEEcChhhcC
Confidence 46789999999999999988864 6899999999999999999988774 6899999987764
No 163
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.90 E-value=2.5e-09 Score=94.61 Aligned_cols=64 Identities=8% Similarity=0.084 Sum_probs=53.7
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHH------cCCCCcEEEEecCCCC
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQK------YALGDRCRLFVADGTT 173 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~------~g~~~~v~~~~~D~~~ 173 (313)
..++.+|||+|||+|..+..+|+..+ ...|+|+|+|+.+++.++++++. .++. |+.++++|+..
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~-nv~~~~~d~~~ 113 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLFP-DTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQ-NIACLRSNAMK 113 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGST-TSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCT-TEEEEECCTTT
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHCC-CCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCC-eEEEEECcHHH
Confidence 34677999999999999999998764 46899999999999999988765 3554 79999999975
No 164
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.89 E-value=3.3e-09 Score=95.93 Aligned_cols=126 Identities=17% Similarity=0.150 Sum_probs=83.8
Q ss_pred HHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCC---CcEEEEecCCCCCCc
Q 021397 100 GAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALG---DRCRLFVADGTTFSL 176 (313)
Q Consensus 100 ~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~---~~v~~~~~D~~~~d~ 176 (313)
..+...+...++.+|||+|||+|..+..+++. ...|+|+|+|+.+++.+++++...+.. .++.+..+|+..++.
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 123 (293)
T 3thr_A 47 AWLLGLLRQHGCHRVLDVACGTGVDSIMLVEE---GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDK 123 (293)
T ss_dssp HHHHHHHHHTTCCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHH
T ss_pred HHHHHHhcccCCCEEEEecCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCcc
Confidence 44555566678899999999999999999986 258999999999999999887554422 257888888876541
Q ss_pred -cccccccCccccc-ccccccccccccccccchhHHHHHHHHHHHHHhhhhhccccCcceeEeecCCcEEEEEcCC
Q 021397 177 -APLRLLLDPGSCN-SVLQEKDDTFREWTSRIPWKERKRAVKARENAASKAIVRSEHPELIFYGRRSGIVGLTKEE 250 (313)
Q Consensus 177 -v~~D~~l~~~s~s-g~l~~~p~~~~~w~~~~~~~~~~~~~q~~~l~~~~~~~r~~~~El~~~~k~gG~lvysTcs 250 (313)
...+..||.+.|. .++.+.++.... . .....++..+.+++ +|||+++.+++.
T Consensus 124 ~~~~~~~fD~V~~~g~~l~~~~~~~~~--~---------~~~~~~l~~~~~~L-----------kpgG~l~~~~~~ 177 (293)
T 3thr_A 124 DVPAGDGFDAVICLGNSFAHLPDSKGD--Q---------SEHRLALKNIASMV-----------RPGGLLVIDHRN 177 (293)
T ss_dssp HSCCTTCEEEEEECTTCGGGSCCSSSS--S---------HHHHHHHHHHHHTE-----------EEEEEEEEEEEC
T ss_pred ccccCCCeEEEEEcChHHhhcCccccC--H---------HHHHHHHHHHHHHc-----------CCCeEEEEEeCC
Confidence 0123455656776 466555542100 0 01122334444555 559999988875
No 165
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.88 E-value=1.3e-08 Score=97.90 Aligned_cols=70 Identities=11% Similarity=0.155 Sum_probs=59.8
Q ss_pred HHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHH-------HHHHHHcCCC-CcEEEEecCCC
Q 021397 102 AVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAAC-------RTLLQKYALG-DRCRLFVADGT 172 (313)
Q Consensus 102 ~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~-------~~~~~~~g~~-~~v~~~~~D~~ 172 (313)
+...+++++|++|||+|||+|..+..+|+..+. ..|+|+|+++.+++.+ +++++.+|+. .+++++.+|..
T Consensus 234 ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~-~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~ 311 (433)
T 1u2z_A 234 VYQQCQLKKGDTFMDLGSGVGNCVVQAALECGC-ALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSF 311 (433)
T ss_dssp HHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCC-SEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCS
T ss_pred HHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcc
Confidence 445678889999999999999999999998753 5899999999998888 9999999942 47999988654
No 166
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.88 E-value=4.6e-09 Score=96.27 Aligned_cols=81 Identities=12% Similarity=0.188 Sum_probs=66.3
Q ss_pred EEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 021397 92 IYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADG 171 (313)
Q Consensus 92 ~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~ 171 (313)
|..+......++..+++.++++|||+|||+|..|..+++. .+.|+|+|+++.+++.++++++..+.. +++++.+|+
T Consensus 24 fl~~~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~---~~~v~~vDi~~~~~~~a~~~~~~~~~~-~v~~~~~D~ 99 (299)
T 2h1r_A 24 LLKNPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL---AKKVITIDIDSRMISEVKKRCLYEGYN-NLEVYEGDA 99 (299)
T ss_dssp EECCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT---SSEEEEECSCHHHHHHHHHHHHHTTCC-CEEC----C
T ss_pred eecCHHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEECch
Confidence 5556667777888889999999999999999999999875 368999999999999999999888874 799999999
Q ss_pred CCCCc
Q 021397 172 TTFSL 176 (313)
Q Consensus 172 ~~~d~ 176 (313)
..++.
T Consensus 100 ~~~~~ 104 (299)
T 2h1r_A 100 IKTVF 104 (299)
T ss_dssp CSSCC
T ss_pred hhCCc
Confidence 76653
No 167
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.88 E-value=4.7e-09 Score=98.22 Aligned_cols=65 Identities=12% Similarity=0.171 Sum_probs=58.0
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d 175 (313)
+.++.+|||+|||+|..+..+++. + ..+|+|+|+| .+++.++++++..++.++++++.+|+..++
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~-g-~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~ 128 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKA-G-ARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVE 128 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHT-T-CSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCC
T ss_pred cCCCCEEEEEeccchHHHHHHHHC-C-CCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHcc
Confidence 457899999999999999999986 3 4699999999 599999999999999877999999998764
No 168
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.87 E-value=6.2e-09 Score=92.38 Aligned_cols=63 Identities=8% Similarity=0.057 Sum_probs=56.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT 173 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~ 173 (313)
++.+|||+|||+|..+..+++..++ .+|+|+|+|+.+++.++++++.+++.++++++++|+..
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 127 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNG-WYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKT 127 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTC
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCC-CeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhh
Confidence 5779999999999999999987643 79999999999999999999999987679999998643
No 169
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.87 E-value=8.1e-09 Score=93.94 Aligned_cols=86 Identities=14% Similarity=0.171 Sum_probs=70.7
Q ss_pred EEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 021397 92 IYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADG 171 (313)
Q Consensus 92 ~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~ 171 (313)
|..+......++..+++.++++|||+|||+|..|..+++.. .+|+|+|+|+.+++.++++++..+..++++++++|+
T Consensus 10 fl~d~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~ 86 (285)
T 1zq9_A 10 ILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKA---KKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDV 86 (285)
T ss_dssp EECCHHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCT
T ss_pred ccCCHHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhC---CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcce
Confidence 34455556677788889999999999999999999999872 589999999999999999988777645799999999
Q ss_pred CCCCccccc
Q 021397 172 TTFSLAPLR 180 (313)
Q Consensus 172 ~~~d~v~~D 180 (313)
..++...+|
T Consensus 87 ~~~~~~~fD 95 (285)
T 1zq9_A 87 LKTDLPFFD 95 (285)
T ss_dssp TTSCCCCCS
T ss_pred ecccchhhc
Confidence 876543333
No 170
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.87 E-value=5.2e-09 Score=98.92 Aligned_cols=69 Identities=19% Similarity=0.209 Sum_probs=60.5
Q ss_pred hcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCc
Q 021397 105 ALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSL 176 (313)
Q Consensus 105 ~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~ 176 (313)
.+...++.+|||+|||+|..+..+++. + ..+|+|+|+| .+++.++++++..++.++++++++|+..++.
T Consensus 58 ~~~~~~~~~VLDlGcGtG~ls~~la~~-g-~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 126 (376)
T 3r0q_C 58 NKHHFEGKTVLDVGTGSGILAIWSAQA-G-ARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISL 126 (376)
T ss_dssp TTTTTTTCEEEEESCTTTHHHHHHHHT-T-CSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCC
T ss_pred ccccCCCCEEEEeccCcCHHHHHHHhc-C-CCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCc
Confidence 345678999999999999999999986 3 3599999999 9999999999999998789999999987653
No 171
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.86 E-value=9.9e-09 Score=95.94 Aligned_cols=71 Identities=14% Similarity=0.127 Sum_probs=60.6
Q ss_pred HHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 021397 102 AVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 102 ~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d 175 (313)
+...+...++.+|||+|||+|..+..+++. +..+|+|+|+|+ +++.++++++..|+.++++++.+|+..++
T Consensus 42 i~~~l~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~ 112 (348)
T 2y1w_A 42 ILQNHTDFKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS 112 (348)
T ss_dssp HHHTGGGTTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCC
T ss_pred HHhccccCCcCEEEEcCCCccHHHHHHHhC--CCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCC
Confidence 444556678999999999999999999885 336999999996 88999999999998778999999998764
No 172
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.86 E-value=2.1e-09 Score=93.06 Aligned_cols=71 Identities=18% Similarity=0.138 Sum_probs=57.3
Q ss_pred HhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHH----HHcCCCCcEEEEecCCCCCCc
Q 021397 104 SALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLL----QKYALGDRCRLFVADGTTFSL 176 (313)
Q Consensus 104 ~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~----~~~g~~~~v~~~~~D~~~~d~ 176 (313)
..+.++++.+|||+|||+|..+..+++..+ ..+|+|+|+|+.|++.+.+++ +..++. +++++++|+..++.
T Consensus 21 ~~l~~~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~-~v~~~~~d~~~l~~ 95 (218)
T 3mq2_A 21 EQLRSQYDDVVLDVGTGDGKHPYKVARQNP-SRLVVALDADKSRMEKISAKAAAKPAKGGLP-NLLYLWATAERLPP 95 (218)
T ss_dssp HHHHTTSSEEEEEESCTTCHHHHHHHHHCT-TEEEEEEESCGGGGHHHHHHHTSCGGGTCCT-TEEEEECCSTTCCS
T ss_pred HHhhccCCCEEEEecCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhhhhcCCC-ceEEEecchhhCCC
Confidence 445578899999999999999999999753 479999999999988654433 345664 79999999988664
No 173
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.86 E-value=1.6e-08 Score=92.58 Aligned_cols=83 Identities=19% Similarity=0.177 Sum_probs=62.1
Q ss_pred CCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcC------CCCcEEEEecCCCCCCc--cccc
Q 021397 109 SAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYA------LGDRCRLFVADGTTFSL--APLR 180 (313)
Q Consensus 109 ~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g------~~~~v~~~~~D~~~~d~--v~~D 180 (313)
.++.+|||+|||+|..+..+++. ....|+++|+|+.+++.++++....+ ...++.++++|+..++. .+.+
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 110 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKG--RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRD 110 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSS
T ss_pred CCCCEEEEECCCCcHHHHHHHhc--CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhccc
Confidence 37889999999999999999873 34699999999999999999887652 12379999999987652 1112
Q ss_pred --cccCccccccccc
Q 021397 181 --LLLDPGSCNSVLQ 193 (313)
Q Consensus 181 --~~l~~~s~sg~l~ 193 (313)
..||.+.|..+++
T Consensus 111 ~~~~fD~V~~~~~l~ 125 (313)
T 3bgv_A 111 PQMCFDICSCQFVCH 125 (313)
T ss_dssp TTCCEEEEEEETCGG
T ss_pred CCCCEEEEEEecchh
Confidence 2566667766653
No 174
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.85 E-value=1.2e-08 Score=94.12 Aligned_cols=89 Identities=16% Similarity=0.079 Sum_probs=70.0
Q ss_pred HHHHhcCC--CCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccc
Q 021397 101 AAVSALNI--SAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAP 178 (313)
Q Consensus 101 ~~~~~l~~--~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~ 178 (313)
.+...++. .++.+|||+|||+|..+..+++..+ ..+++++|++ .+++.+++++.+.++.++++++.+|+...+..
T Consensus 154 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~- 230 (335)
T 2r3s_A 154 LIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNP-NAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYG- 230 (335)
T ss_dssp HHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCT-TCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCC-
T ss_pred HHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCC-CCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCC-
Confidence 44455666 7889999999999999999999875 3699999999 99999999999999876799999998765321
Q ss_pred cccccCcccccccccc
Q 021397 179 LRLLLDPGSCNSVLQE 194 (313)
Q Consensus 179 ~D~~l~~~s~sg~l~~ 194 (313)
..+|.+.+..+++.
T Consensus 231 --~~~D~v~~~~~l~~ 244 (335)
T 2r3s_A 231 --NDYDLVLLPNFLHH 244 (335)
T ss_dssp --SCEEEEEEESCGGG
T ss_pred --CCCcEEEEcchhcc
Confidence 11444466655544
No 175
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.85 E-value=3.8e-09 Score=98.51 Aligned_cols=91 Identities=14% Similarity=0.093 Sum_probs=68.9
Q ss_pred CeEEEecHHHHHHHHhc----CCCCCCEEEEECCCcChHHHHHHHHhCCC----cEEEEEcCCHHHHHHHHHHHHHcCCC
Q 021397 90 GKIYGIDAASGAAVSAL----NISAGDHVLDLCAAPGAKLCMILDIIGDS----GSVTGVDVARHRLAACRTLLQKYALG 161 (313)
Q Consensus 90 G~~~~Qd~ss~~~~~~l----~~~~g~~VLDlcagpG~kt~~la~~~~~~----~~V~avD~s~~~l~~~~~~~~~~g~~ 161 (313)
|.++-.+..+.+++.++ ++.++.+|||+|||+|+.+..+++.++.. ..|+|+|+++.+++.++.|+...|+
T Consensus 106 g~~~TP~~i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~- 184 (344)
T 2f8l_A 106 NHQMTPDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ- 184 (344)
T ss_dssp GGCCCCHHHHHHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC-
T ss_pred CcCCChHHHHHHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC-
Confidence 54444444444434333 56678899999999999999999887532 6899999999999999999998888
Q ss_pred CcEEEEecCCCC------CCccccccc
Q 021397 162 DRCRLFVADGTT------FSLAPLRLL 182 (313)
Q Consensus 162 ~~v~~~~~D~~~------~d~v~~D~~ 182 (313)
++.++++|+.. ||++..+|.
T Consensus 185 -~~~i~~~D~l~~~~~~~fD~Ii~NPP 210 (344)
T 2f8l_A 185 -KMTLLHQDGLANLLVDPVDVVISDLP 210 (344)
T ss_dssp -CCEEEESCTTSCCCCCCEEEEEEECC
T ss_pred -CceEEECCCCCccccCCccEEEECCC
Confidence 58899999743 444555543
No 176
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.85 E-value=6.3e-09 Score=88.83 Aligned_cols=75 Identities=12% Similarity=0.026 Sum_probs=59.1
Q ss_pred CCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccccccccCcccccc
Q 021397 111 GDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLRLLLDPGSCNS 190 (313)
Q Consensus 111 g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D~~l~~~s~sg 190 (313)
+.+|||+|||+|..+..+++. ...|+|+|+|+.+++.++++ . .++.++.+|+..++. .+..||.+.|..
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~-----~-~~~~~~~~d~~~~~~--~~~~fD~v~~~~ 110 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL---GHQIEGLEPATRLVELARQT-----H-PSVTFHHGTITDLSD--SPKRWAGLLAWY 110 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT---TCCEEEECCCHHHHHHHHHH-----C-TTSEEECCCGGGGGG--SCCCEEEEEEES
T ss_pred CCeEEEecCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHh-----C-CCCeEEeCccccccc--CCCCeEEEEehh
Confidence 889999999999999999986 35899999999999999876 2 268999999987653 234455557777
Q ss_pred cccccc
Q 021397 191 VLQEKD 196 (313)
Q Consensus 191 ~l~~~p 196 (313)
++.+.+
T Consensus 111 ~l~~~~ 116 (203)
T 3h2b_A 111 SLIHMG 116 (203)
T ss_dssp SSTTCC
T ss_pred hHhcCC
Confidence 665543
No 177
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.84 E-value=1.2e-08 Score=89.75 Aligned_cols=83 Identities=12% Similarity=0.101 Sum_probs=61.4
Q ss_pred CCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccc-cc--ccc
Q 021397 107 NISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAP-LR--LLL 183 (313)
Q Consensus 107 ~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~-~D--~~l 183 (313)
.+.++.+|||+|||+|..+..+++... +|+|+|+|+.+++.+++++ .. .+++++++|+..++... +| ..+
T Consensus 53 ~~~~~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~---~~-~~~~~~~~d~~~~~~~~~~~~~~~~ 125 (245)
T 3ggd_A 53 LFNPELPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKEN---TA-ANISYRLLDGLVPEQAAQIHSEIGD 125 (245)
T ss_dssp TSCTTSCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHS---CC-TTEEEEECCTTCHHHHHHHHHHHCS
T ss_pred ccCCCCeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhC---cc-cCceEEECcccccccccccccccCc
Confidence 467889999999999999999998743 7999999999999999876 32 37999999998754321 11 124
Q ss_pred Ccccccccccccc
Q 021397 184 DPGSCNSVLQEKD 196 (313)
Q Consensus 184 ~~~s~sg~l~~~p 196 (313)
+.+.+..++...+
T Consensus 126 d~v~~~~~~~~~~ 138 (245)
T 3ggd_A 126 ANIYMRTGFHHIP 138 (245)
T ss_dssp CEEEEESSSTTSC
T ss_pred cEEEEcchhhcCC
Confidence 4445565554433
No 178
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.84 E-value=2.6e-08 Score=86.80 Aligned_cols=104 Identities=16% Similarity=0.156 Sum_probs=73.1
Q ss_pred CCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccccccccCcccc
Q 021397 109 SAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLRLLLDPGSC 188 (313)
Q Consensus 109 ~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D~~l~~~s~ 188 (313)
.++.+|||+|||+|..+..+++.. ..|+++|+|+.+++.+++++ . ++.++.+|+..++. +..||.+.|
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~~~-----~-~~~~~~~d~~~~~~---~~~~D~v~~ 106 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF---GDTAGLELSEDMLTHARKRL-----P-DATLHQGDMRDFRL---GRKFSAVVS 106 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH---SEEEEEESCHHHHHHHHHHC-----T-TCEEEECCTTTCCC---SSCEEEEEE
T ss_pred CCCCeEEEecccCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhC-----C-CCEEEECCHHHccc---CCCCcEEEE
Confidence 578899999999999999999874 38999999999999998763 2 58899999987653 334554454
Q ss_pred cc-cccccccccccccccchhHHHHHHHHHHHHHhhhhhccccCcceeEeecCCcEEEEEcCC
Q 021397 189 NS-VLQEKDDTFREWTSRIPWKERKRAVKARENAASKAIVRSEHPELIFYGRRSGIVGLTKEE 250 (313)
Q Consensus 189 sg-~l~~~p~~~~~w~~~~~~~~~~~~~q~~~l~~~~~~~r~~~~El~~~~k~gG~lvysTcs 250 (313)
+. ++.+.++. ......+....+++ +|||.++.+++.
T Consensus 107 ~~~~~~~~~~~---------------~~~~~~l~~~~~~L-----------~pgG~l~~~~~~ 143 (239)
T 3bxo_A 107 MFSSVGYLKTT---------------EELGAAVASFAEHL-----------EPGGVVVVEPWW 143 (239)
T ss_dssp CTTGGGGCCSH---------------HHHHHHHHHHHHTE-----------EEEEEEEECCCC
T ss_pred cCchHhhcCCH---------------HHHHHHHHHHHHhc-----------CCCeEEEEEecc
Confidence 33 44433221 01122333444455 459999999876
No 179
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.84 E-value=2.9e-09 Score=88.03 Aligned_cols=59 Identities=14% Similarity=0.010 Sum_probs=53.0
Q ss_pred CCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT 173 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~ 173 (313)
++.+|||+|||+|..+..+++.. ..|+|+|+|+.+++.++++++..++ +++++++|+..
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~ 99 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEG---WEAVLVEKDPEAVRLLKENVRRTGL--GARVVALPVEV 99 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTT---CEEEEECCCHHHHHHHHHHHHHHTC--CCEEECSCHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHHCC---CeEEEEeCCHHHHHHHHHHHHHcCC--ceEEEeccHHH
Confidence 78899999999999999999862 3499999999999999999999987 69999999854
No 180
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.84 E-value=1.9e-08 Score=94.21 Aligned_cols=87 Identities=24% Similarity=0.143 Sum_probs=69.5
Q ss_pred HHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC-CCcccc
Q 021397 101 AAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT-FSLAPL 179 (313)
Q Consensus 101 ~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~-~d~v~~ 179 (313)
.+...++..++.+|||+|||+|..+..+++..+ ..+++++|+ +.+++.+++++...++.++++++.+|+.. ++.
T Consensus 173 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--- 247 (374)
T 1qzz_A 173 APADAYDWSAVRHVLDVGGGNGGMLAAIALRAP-HLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPLPV--- 247 (374)
T ss_dssp HHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSC---
T ss_pred HHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCC-CCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcCCC---
Confidence 345566777889999999999999999999865 469999999 99999999999999987789999999864 221
Q ss_pred ccccCcccccccccc
Q 021397 180 RLLLDPGSCNSVLQE 194 (313)
Q Consensus 180 D~~l~~~s~sg~l~~ 194 (313)
.||.+.+..++++
T Consensus 248 --~~D~v~~~~vl~~ 260 (374)
T 1qzz_A 248 --TADVVLLSFVLLN 260 (374)
T ss_dssp --CEEEEEEESCGGG
T ss_pred --CCCEEEEeccccC
Confidence 1444466666544
No 181
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.83 E-value=5.9e-09 Score=93.56 Aligned_cols=71 Identities=17% Similarity=0.134 Sum_probs=56.9
Q ss_pred CCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccccccccCccccc
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLRLLLDPGSCN 189 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D~~l~~~s~s 189 (313)
.+.+|||+|||+|..+..+++. ..+|+|+|+|+.|++.++++ .++.++++|+..+++ -|..||.+.|.
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~---~~~v~gvD~s~~ml~~a~~~-------~~v~~~~~~~e~~~~--~~~sfD~v~~~ 106 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEF---FERVHAVDPGEAQIRQALRH-------PRVTYAVAPAEDTGL--PPASVDVAIAA 106 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTT---CSEEEEEESCHHHHHTCCCC-------TTEEEEECCTTCCCC--CSSCEEEEEEC
T ss_pred CCCCEEEEcCCCCHHHHHHHHh---CCEEEEEeCcHHhhhhhhhc-------CCceeehhhhhhhcc--cCCcccEEEEe
Confidence 4579999999999999999875 36899999999999876531 379999999988764 35566666777
Q ss_pred ccc
Q 021397 190 SVL 192 (313)
Q Consensus 190 g~l 192 (313)
.++
T Consensus 107 ~~~ 109 (257)
T 4hg2_A 107 QAM 109 (257)
T ss_dssp SCC
T ss_pred eeh
Confidence 766
No 182
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.83 E-value=7.9e-09 Score=91.98 Aligned_cols=75 Identities=23% Similarity=0.301 Sum_probs=59.4
Q ss_pred CCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccccccccCcccc
Q 021397 109 SAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLRLLLDPGSC 188 (313)
Q Consensus 109 ~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D~~l~~~s~ 188 (313)
.++.+|||+|||+|..+..+++. ...|+|+|+|+.+++.+++++. ++.++++|+..++. +..||.+.|
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~------~~~~~~~d~~~~~~---~~~fD~v~~ 116 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADS---FGTVEGLELSADMLAIARRRNP------DAVLHHGDMRDFSL---GRRFSAVTC 116 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTT---SSEEEEEESCHHHHHHHHHHCT------TSEEEECCTTTCCC---SCCEEEEEE
T ss_pred CCCCcEEEeCCcCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhCC------CCEEEECChHHCCc---cCCcCEEEE
Confidence 46789999999999999999875 3589999999999999997642 58899999988764 445555566
Q ss_pred cc-ccccc
Q 021397 189 NS-VLQEK 195 (313)
Q Consensus 189 sg-~l~~~ 195 (313)
.+ ++.+.
T Consensus 117 ~~~~l~~~ 124 (263)
T 3pfg_A 117 MFSSIGHL 124 (263)
T ss_dssp CTTGGGGS
T ss_pred cCchhhhc
Confidence 65 66543
No 183
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.83 E-value=8.2e-09 Score=88.49 Aligned_cols=70 Identities=21% Similarity=0.294 Sum_probs=59.5
Q ss_pred CCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC----Cccccc
Q 021397 107 NISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF----SLAPLR 180 (313)
Q Consensus 107 ~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~----d~v~~D 180 (313)
.+.++.+|||+|||+|..+..+++. + ...|+|+|+|+.+++.++++++..++ +++++++|+..+ |.+..|
T Consensus 46 ~~~~~~~vlD~g~G~G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~D~v~~~ 119 (207)
T 1wy7_A 46 GDIEGKVVADLGAGTGVLSYGALLL-G-AKEVICVEVDKEAVDVLIENLGEFKG--KFKVFIGDVSEFNSRVDIVIMN 119 (207)
T ss_dssp TSSTTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHTGGGTT--SEEEEESCGGGCCCCCSEEEEC
T ss_pred CCCCcCEEEEeeCCCCHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHHHHHcCC--CEEEEECchHHcCCCCCEEEEc
Confidence 4668899999999999999999886 2 35899999999999999999998887 699999998754 444445
No 184
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.81 E-value=7.3e-09 Score=85.89 Aligned_cols=104 Identities=13% Similarity=0.107 Sum_probs=73.8
Q ss_pred HhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCcccccccc
Q 021397 104 SALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLRLLL 183 (313)
Q Consensus 104 ~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D~~l 183 (313)
..+.+.++.+|||+|||+|..+..+++.. ..|+++|+++.+++.++++ . .+++++.+| ..++ +..|
T Consensus 11 ~~~~~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~-----~-~~v~~~~~d-~~~~----~~~~ 76 (170)
T 3i9f_A 11 PNIFEGKKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEK-----F-DSVITLSDP-KEIP----DNSV 76 (170)
T ss_dssp HHHHSSCCEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHH-----C-TTSEEESSG-GGSC----TTCE
T ss_pred HhcCcCCCCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHh-----C-CCcEEEeCC-CCCC----CCce
Confidence 34557789999999999999999999864 4899999999999999987 2 378999998 3222 2344
Q ss_pred CcccccccccccccccccccccchhHHHHHHHHHHHHHhhhhhccccCcceeEeecCCcEEEEEcCC
Q 021397 184 DPGSCNSVLQEKDDTFREWTSRIPWKERKRAVKARENAASKAIVRSEHPELIFYGRRSGIVGLTKEE 250 (313)
Q Consensus 184 ~~~s~sg~l~~~p~~~~~w~~~~~~~~~~~~~q~~~l~~~~~~~r~~~~El~~~~k~gG~lvysTcs 250 (313)
|.+.+..++.+.++. ...+....+.+ +|||+++.++..
T Consensus 77 D~v~~~~~l~~~~~~------------------~~~l~~~~~~L-----------~pgG~l~~~~~~ 114 (170)
T 3i9f_A 77 DFILFANSFHDMDDK------------------QHVISEVKRIL-----------KDDGRVIIIDWR 114 (170)
T ss_dssp EEEEEESCSTTCSCH------------------HHHHHHHHHHE-----------EEEEEEEEEEEC
T ss_pred EEEEEccchhcccCH------------------HHHHHHHHHhc-----------CCCCEEEEEEcC
Confidence 444666666544431 11223334444 559999998776
No 185
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.81 E-value=1.1e-08 Score=94.83 Aligned_cols=67 Identities=18% Similarity=0.262 Sum_probs=58.2
Q ss_pred cCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 021397 106 LNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 106 l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d 175 (313)
+...++.+|||+|||+|..+..+++. + ..+|+|+|+| .+++.++++++..++.++++++.+|+..++
T Consensus 34 ~~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~ 100 (328)
T 1g6q_1 34 KDLFKDKIVLDVGCGTGILSMFAAKH-G-AKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVH 100 (328)
T ss_dssp HHHHTTCEEEEETCTTSHHHHHHHHT-C-CSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSC
T ss_pred HhhcCCCEEEEecCccHHHHHHHHHC-C-CCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhcc
Confidence 34567899999999999999998875 3 3589999999 699999999999999778999999998764
No 186
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.81 E-value=1.5e-08 Score=86.94 Aligned_cols=74 Identities=19% Similarity=0.140 Sum_probs=57.1
Q ss_pred CCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccccccccCccccc
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLRLLLDPGSCN 189 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D~~l~~~s~s 189 (313)
++.+|||+|||+|..+..+ + ...|+++|+|+.+++.+++++ .++.++.+|+..++. .+..||.+.+.
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----~-~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~--~~~~fD~v~~~ 102 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----P-YPQKVGVEPSEAMLAVGRRRA------PEATWVRAWGEALPF--PGESFDVVLLF 102 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----C-CSEEEEECCCHHHHHHHHHHC------TTSEEECCCTTSCCS--CSSCEEEEEEE
T ss_pred CCCeEEEECCCCCHhHHhC----C-CCeEEEEeCCHHHHHHHHHhC------CCcEEEEcccccCCC--CCCcEEEEEEc
Confidence 7899999999999998877 2 238999999999999998775 268899999887653 23445555677
Q ss_pred ccccccc
Q 021397 190 SVLQEKD 196 (313)
Q Consensus 190 g~l~~~p 196 (313)
.++.+.+
T Consensus 103 ~~l~~~~ 109 (211)
T 2gs9_A 103 TTLEFVE 109 (211)
T ss_dssp SCTTTCS
T ss_pred ChhhhcC
Confidence 7665544
No 187
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.81 E-value=1.1e-08 Score=87.44 Aligned_cols=121 Identities=14% Similarity=0.021 Sum_probs=78.2
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccccccccCccc
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLRLLLDPGS 187 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D~~l~~~s 187 (313)
+.++.+|||+|||+|..+..+++.. . ..|+++|+|+.+++.+++++.. . .++.++.+|+..++. .+..||.+.
T Consensus 40 ~~~~~~vLdiGcG~G~~~~~l~~~~-~-~~v~~~D~s~~~~~~a~~~~~~--~-~~i~~~~~d~~~~~~--~~~~fD~v~ 112 (215)
T 2pxx_A 40 LRPEDRILVLGCGNSALSYELFLGG-F-PNVTSVDYSSVVVAAMQACYAH--V-PQLRWETMDVRKLDF--PSASFDVVL 112 (215)
T ss_dssp CCTTCCEEEETCTTCSHHHHHHHTT-C-CCEEEEESCHHHHHHHHHHTTT--C-TTCEEEECCTTSCCS--CSSCEEEEE
T ss_pred cCCCCeEEEECCCCcHHHHHHHHcC-C-CcEEEEeCCHHHHHHHHHhccc--C-CCcEEEEcchhcCCC--CCCcccEEE
Confidence 3678999999999999999999862 2 3899999999999999988754 2 368999999977643 123344445
Q ss_pred cccccccccc-ccccccccchhHHHHHHHHHHHHHhhhhhccccCcceeEeecCCcEEEEEcCC
Q 021397 188 CNSVLQEKDD-TFREWTSRIPWKERKRAVKARENAASKAIVRSEHPELIFYGRRSGIVGLTKEE 250 (313)
Q Consensus 188 ~sg~l~~~p~-~~~~w~~~~~~~~~~~~~q~~~l~~~~~~~r~~~~El~~~~k~gG~lvysTcs 250 (313)
+.+++..... .-..|....... .....++....+++ +|||+++..+.+
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~L-----------kpgG~li~~~~~ 161 (215)
T 2pxx_A 113 EKGTLDALLAGERDPWTVSSEGV----HTVDQVLSEVSRVL-----------VPGGRFISMTSA 161 (215)
T ss_dssp EESHHHHHTTTCSCTTSCCHHHH----HHHHHHHHHHHHHE-----------EEEEEEEEEESC
T ss_pred ECcchhhhccccccccccccchh----HHHHHHHHHHHHhC-----------cCCCEEEEEeCC
Confidence 5544422110 001343321111 11223334444555 459999999887
No 188
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.80 E-value=9.6e-09 Score=93.26 Aligned_cols=89 Identities=13% Similarity=0.097 Sum_probs=59.5
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhC---CCcEE--EEEcCCHHHHHHHHHHHHHc-CCCCcEEEE--ecCCCCCCc---
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIG---DSGSV--TGVDVARHRLAACRTLLQKY-ALGDRCRLF--VADGTTFSL--- 176 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~---~~~~V--~avD~s~~~l~~~~~~~~~~-g~~~~v~~~--~~D~~~~d~--- 176 (313)
+.++.+|||+|||+|..+..++..+. ....| +++|+|+.|++.++++++.. ++. ++.+. .+|+..+..
T Consensus 50 ~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~ 128 (292)
T 2aot_A 50 TKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLE-NVKFAWHKETSSEYQSRML 128 (292)
T ss_dssp TCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCT-TEEEEEECSCHHHHHHHHH
T ss_pred CCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCC-cceEEEEecchhhhhhhhc
Confidence 45778999999999998876554331 23544 99999999999999988764 443 55553 444433220
Q ss_pred -cccccccCccccccccccccc
Q 021397 177 -APLRLLLDPGSCNSVLQEKDD 197 (313)
Q Consensus 177 -v~~D~~l~~~s~sg~l~~~p~ 197 (313)
-..|..||.+.|..++++-+|
T Consensus 129 ~~~~~~~fD~V~~~~~l~~~~d 150 (292)
T 2aot_A 129 EKKELQKWDFIHMIQMLYYVKD 150 (292)
T ss_dssp TTTCCCCEEEEEEESCGGGCSC
T ss_pred cccCCCceeEEEEeeeeeecCC
Confidence 012345666688888876665
No 189
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.80 E-value=2.7e-09 Score=95.60 Aligned_cols=86 Identities=14% Similarity=0.022 Sum_probs=60.4
Q ss_pred CCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCC--------------------------
Q 021397 107 NISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYAL-------------------------- 160 (313)
Q Consensus 107 ~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~-------------------------- 160 (313)
.+.+|.+|||+|||+|..+..++.. +...|+|+|+|+.+++.++++++....
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~--~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~ 129 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACD--SFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEE 129 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGG--TEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHh--hhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHH
Confidence 4567899999999999887766543 224799999999999999988754320
Q ss_pred --CCcEE-EEecCCCCCCc-c-ccccccCcccccccccc
Q 021397 161 --GDRCR-LFVADGTTFSL-A-PLRLLLDPGSCNSVLQE 194 (313)
Q Consensus 161 --~~~v~-~~~~D~~~~d~-v-~~D~~l~~~s~sg~l~~ 194 (313)
..++. ++.+|+...+. . ..++.||.+.++.+++.
T Consensus 130 ~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~ 168 (263)
T 2a14_A 130 KLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMEC 168 (263)
T ss_dssp HHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHH
T ss_pred HHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHH
Confidence 01244 88899876421 1 12356777788877754
No 190
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.79 E-value=8.8e-08 Score=90.04 Aligned_cols=116 Identities=18% Similarity=0.183 Sum_probs=84.5
Q ss_pred HHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCcccccc
Q 021397 102 AVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLRL 181 (313)
Q Consensus 102 ~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D~ 181 (313)
+...++..++.+|||+|||+|..+..+++..+ ..+++++|+ +.+++.+++++...++.++|+++.+|+.. +.. +
T Consensus 194 l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~-~~p--~- 267 (369)
T 3gwz_A 194 VAAAYDFSGAATAVDIGGGRGSLMAAVLDAFP-GLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFE-TIP--D- 267 (369)
T ss_dssp HHHHSCCTTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTT-CCC--S-
T ss_pred HHHhCCCccCcEEEEeCCCccHHHHHHHHHCC-CCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCC-CCC--C-
Confidence 44456677889999999999999999999865 468999999 99999999999999987789999999862 111 1
Q ss_pred ccCcccccccccccccccccccccchhHHHHHHHHHHHHHhhhhhccccCcceeEeecCCcEEEEEcCC
Q 021397 182 LLDPGSCNSVLQEKDDTFREWTSRIPWKERKRAVKARENAASKAIVRSEHPELIFYGRRSGIVGLTKEE 250 (313)
Q Consensus 182 ~l~~~s~sg~l~~~p~~~~~w~~~~~~~~~~~~~q~~~l~~~~~~~r~~~~El~~~~k~gG~lvysTcs 250 (313)
.+|.+.+..+++..++. ...+++.+..+++ +|||+|+.....
T Consensus 268 ~~D~v~~~~vlh~~~d~----------------~~~~~L~~~~~~L-----------~pgG~l~i~e~~ 309 (369)
T 3gwz_A 268 GADVYLIKHVLHDWDDD----------------DVVRILRRIATAM-----------KPDSRLLVIDNL 309 (369)
T ss_dssp SCSEEEEESCGGGSCHH----------------HHHHHHHHHHTTC-----------CTTCEEEEEEEB
T ss_pred CceEEEhhhhhccCCHH----------------HHHHHHHHHHHHc-----------CCCCEEEEEEec
Confidence 34444666666443321 1123344455555 459998887765
No 191
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.79 E-value=1.3e-08 Score=97.95 Aligned_cols=68 Identities=19% Similarity=0.199 Sum_probs=60.6
Q ss_pred HHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 021397 102 AVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT 173 (313)
Q Consensus 102 ~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~ 173 (313)
+...+++.++++|||+|||+|..+..+++. ...|+|+|+|+.+++.+++|++.+|+. +++++++|+..
T Consensus 278 ~~~~l~~~~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s~~al~~A~~n~~~~~~~-~v~f~~~d~~~ 345 (433)
T 1uwv_A 278 ALEWLDVQPEDRVLDLFCGMGNFTLPLATQ---AASVVGVEGVPALVEKGQQNARLNGLQ-NVTFYHENLEE 345 (433)
T ss_dssp HHHHHTCCTTCEEEEESCTTTTTHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCTTS
T ss_pred HHHhhcCCCCCEEEECCCCCCHHHHHHHhh---CCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEECCHHH
Confidence 344567788899999999999999999976 368999999999999999999999986 79999999865
No 192
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.79 E-value=2.9e-08 Score=89.70 Aligned_cols=110 Identities=16% Similarity=0.047 Sum_probs=75.0
Q ss_pred CCCEEEEECCCc---ChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCcc--------c
Q 021397 110 AGDHVLDLCAAP---GAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLA--------P 178 (313)
Q Consensus 110 ~g~~VLDlcagp---G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v--------~ 178 (313)
+..+|||+|||+ |..+..+++..+ ..+|+++|+|+.|++.+++++.. .++++++.+|+...+.+ .
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p-~~~v~~vD~sp~~l~~Ar~~~~~---~~~v~~~~~D~~~~~~~~~~~~~~~~ 152 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNP-DARVVYVDIDPMVLTHGRALLAK---DPNTAVFTADVRDPEYILNHPDVRRM 152 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCT-TCEEEEEESSHHHHHHHHHHHTT---CTTEEEEECCTTCHHHHHHSHHHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCC-CCEEEEEECChHHHHHHHHhcCC---CCCeEEEEeeCCCchhhhccchhhcc
Confidence 447999999999 988766655543 47999999999999999988743 24799999999764321 1
Q ss_pred cc-cccCcccccccccccccccccccccchhHHHHHHHHHHHHHhhhhhccccCcceeEeecCCcEEEEEcCC
Q 021397 179 LR-LLLDPGSCNSVLQEKDDTFREWTSRIPWKERKRAVKARENAASKAIVRSEHPELIFYGRRSGIVGLTKEE 250 (313)
Q Consensus 179 ~D-~~l~~~s~sg~l~~~p~~~~~w~~~~~~~~~~~~~q~~~l~~~~~~~r~~~~El~~~~k~gG~lvysTcs 250 (313)
+| ..++.+.+.++++..++- . ...++....+.+ +|||+|+.++..
T Consensus 153 ~d~~~~d~v~~~~vlh~~~d~--~--------------~~~~l~~~~~~L-----------~pGG~l~i~~~~ 198 (274)
T 2qe6_A 153 IDFSRPAAIMLVGMLHYLSPD--V--------------VDRVVGAYRDAL-----------APGSYLFMTSLV 198 (274)
T ss_dssp CCTTSCCEEEETTTGGGSCTT--T--------------HHHHHHHHHHHS-----------CTTCEEEEEEEB
T ss_pred CCCCCCEEEEEechhhhCCcH--H--------------HHHHHHHHHHhC-----------CCCcEEEEEEec
Confidence 23 244555677777655541 0 012233334444 559999998876
No 193
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.78 E-value=4.3e-08 Score=90.59 Aligned_cols=110 Identities=19% Similarity=0.150 Sum_probs=80.9
Q ss_pred CCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCC-CCCccccccccCc
Q 021397 107 NISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGT-TFSLAPLRLLLDP 185 (313)
Q Consensus 107 ~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~-~~d~v~~D~~l~~ 185 (313)
+..++.+|||+|||+|..+..+++..++ .+++++|+ +.+++.+++++...++.++++++.+|+. .++. .+|.
T Consensus 166 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p~-----~~D~ 238 (332)
T 3i53_A 166 DWAALGHVVDVGGGSGGLLSALLTAHED-LSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPA-----GAGG 238 (332)
T ss_dssp CCGGGSEEEEETCTTSHHHHHHHHHCTT-CEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCC-----SCSE
T ss_pred CCCCCCEEEEeCCChhHHHHHHHHHCCC-CeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCCCCC-----CCcE
Confidence 4455789999999999999999998754 68999999 9999999999999998778999999985 2221 3444
Q ss_pred ccccccccccccccccccccchhHHHHHHHHHHHHHhhhhhccccCcceeEeecCCcEEEEEcCC
Q 021397 186 GSCNSVLQEKDDTFREWTSRIPWKERKRAVKARENAASKAIVRSEHPELIFYGRRSGIVGLTKEE 250 (313)
Q Consensus 186 ~s~sg~l~~~p~~~~~w~~~~~~~~~~~~~q~~~l~~~~~~~r~~~~El~~~~k~gG~lvysTcs 250 (313)
+.|..+++..++- ...+++++..++++ |||+|+.....
T Consensus 239 v~~~~vlh~~~~~----------------~~~~~l~~~~~~L~-----------pgG~l~i~e~~ 276 (332)
T 3i53_A 239 YVLSAVLHDWDDL----------------SAVAILRRCAEAAG-----------SGGVVLVIEAV 276 (332)
T ss_dssp EEEESCGGGSCHH----------------HHHHHHHHHHHHHT-----------TTCEEEEEECC
T ss_pred EEEehhhccCCHH----------------HHHHHHHHHHHhcC-----------CCCEEEEEeec
Confidence 4666666544331 11233444455554 59999887765
No 194
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.78 E-value=5.2e-08 Score=92.41 Aligned_cols=92 Identities=17% Similarity=0.147 Sum_probs=72.0
Q ss_pred ccccccCCeEEEecHH------HHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCC----------------------
Q 021397 83 TSMAYKQGKIYGIDAA------SGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGD---------------------- 134 (313)
Q Consensus 83 ~~~~~~~G~~~~Qd~s------s~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~---------------------- 134 (313)
....++.|+...|..+ +..+..+.+..++..|||.|||+|++++.++....+
T Consensus 162 G~~l~krgyr~~~~~Apl~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w 241 (385)
T 3ldu_A 162 GDALHKRGYREKANKAPIRETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIW 241 (385)
T ss_dssp CSCTTCCSCCCC--CCCCCHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHH
T ss_pred CChhhhcccccCCCCCCCcHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHH
Confidence 3466777876665322 233445667788999999999999999999887532
Q ss_pred ---------------CcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 135 ---------------SGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 135 ---------------~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
...|+|+|+++.+++.+++|++.+|+.+++++.++|+..+
T Consensus 242 ~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l 296 (385)
T 3ldu_A 242 WDVRKDAFNKIDNESKFKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQF 296 (385)
T ss_dssp HHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGC
T ss_pred HHHHHHHHHHhhccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhc
Confidence 1479999999999999999999999976899999998654
No 195
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.78 E-value=7.6e-09 Score=90.93 Aligned_cols=77 Identities=17% Similarity=0.199 Sum_probs=58.0
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccccccccCccc
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLRLLLDPGS 187 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D~~l~~~s 187 (313)
++++.+|||+|||+|..+..+++. ...|+|+|+|+.+++.++++ +.++.+|+..+...+.+..||.+.
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~~~~~~~~~~fD~i~ 106 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEE---GIESIGVDINEDMIKFCEGK---------FNVVKSDAIEYLKSLPDKYLDGVM 106 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHH---TCCEEEECSCHHHHHHHHTT---------SEEECSCHHHHHHTSCTTCBSEEE
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhC---CCcEEEEECCHHHHHHHHhh---------cceeeccHHHHhhhcCCCCeeEEE
Confidence 567899999999999999999886 25799999999999988865 567888876541111234566667
Q ss_pred ccccccccc
Q 021397 188 CNSVLQEKD 196 (313)
Q Consensus 188 ~sg~l~~~p 196 (313)
|.+++.+.+
T Consensus 107 ~~~~l~~~~ 115 (240)
T 3dli_A 107 ISHFVEHLD 115 (240)
T ss_dssp EESCGGGSC
T ss_pred ECCchhhCC
Confidence 777776554
No 196
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.78 E-value=5.2e-08 Score=82.90 Aligned_cols=56 Identities=14% Similarity=0.230 Sum_probs=46.4
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCC-CcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGD-SGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~-~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d 175 (313)
++++.+|||+|||||+++..+++.+++ .++|+|+|+|+.+ .. .+++++++|+...+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~-~~v~~~~~d~~~~~ 76 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PI-PNVYFIQGEIGKDN 76 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CC-TTCEEEECCTTTTS
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CC-CCceEEEccccchh
Confidence 578899999999999999999998763 5799999999831 23 36899999987654
No 197
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.78 E-value=9.2e-09 Score=94.12 Aligned_cols=63 Identities=19% Similarity=0.263 Sum_probs=52.4
Q ss_pred CCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHH--cCC-CCcEEEEecCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQK--YAL-GDRCRLFVADGTT 173 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~--~g~-~~~v~~~~~D~~~ 173 (313)
.+.+|||+|||+|+.+..+++..+ ..+|+++|+++.+++.+++++.. .++ ..+++++.+|+..
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~ 155 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDS-VEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAE 155 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTT-CSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHH
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHH
Confidence 458999999999999999998643 47999999999999999999865 233 2479999999743
No 198
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.77 E-value=3.9e-09 Score=94.86 Aligned_cols=82 Identities=15% Similarity=0.120 Sum_probs=66.8
Q ss_pred HHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCH-------HHHHHHHHHHHHcCCCCcEEEEecCC
Q 021397 99 SGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVAR-------HRLAACRTLLQKYALGDRCRLFVADG 171 (313)
Q Consensus 99 s~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~-------~~l~~~~~~~~~~g~~~~v~~~~~D~ 171 (313)
..++..++.+.++.+|||+|||+|..++.+|+. .++|+++|+|+ .+++.+++|++.+++.++++++++|+
T Consensus 72 ~~~l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~---g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~ 148 (258)
T 2r6z_A 72 GELIAKAVNHTAHPTVWDATAGLGRDSFVLASL---GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNA 148 (258)
T ss_dssp -CHHHHHTTGGGCCCEEETTCTTCHHHHHHHHT---TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCH
T ss_pred hHHHHHHhCcCCcCeEEEeeCccCHHHHHHHHh---CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCH
Confidence 445666666677899999999999999999985 36899999999 99999999998888765699999997
Q ss_pred C-----------CCCcccccccc
Q 021397 172 T-----------TFSLAPLRLLL 183 (313)
Q Consensus 172 ~-----------~~d~v~~D~~l 183 (313)
. .||.+.+||.|
T Consensus 149 ~~~l~~~~~~~~~fD~V~~dP~~ 171 (258)
T 2r6z_A 149 AEQMPALVKTQGKPDIVYLDPMY 171 (258)
T ss_dssp HHHHHHHHHHHCCCSEEEECCCC
T ss_pred HHHHHhhhccCCCccEEEECCCC
Confidence 3 36666667654
No 199
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.77 E-value=8.3e-08 Score=90.97 Aligned_cols=92 Identities=16% Similarity=0.104 Sum_probs=71.4
Q ss_pred ccccccCCeEEEecHH------HHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCC----------------------
Q 021397 83 TSMAYKQGKIYGIDAA------SGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGD---------------------- 134 (313)
Q Consensus 83 ~~~~~~~G~~~~Qd~s------s~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~---------------------- 134 (313)
..+.++.||-..|..+ +..+..+.+.+++..+||.+||+|+..+.+|....+
T Consensus 161 g~~LhkRgyr~~~~~Apl~e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w 240 (384)
T 3ldg_A 161 GPSLFKRGYRTEKGGAPIKENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALV 240 (384)
T ss_dssp SSCTTCCSCCCC---CCCCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHH
T ss_pred CCcccccCcccCCCCCCCcHHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHH
Confidence 3456777775544332 233445667888999999999999999998876543
Q ss_pred ---------------CcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 135 ---------------SGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 135 ---------------~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
...|+|+|+++.+++.+++|++.+|+.+++++.++|+..+
T Consensus 241 ~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l 295 (384)
T 3ldg_A 241 TRVRNEADEQADYDIQLDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDF 295 (384)
T ss_dssp HHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGC
T ss_pred HHHHHHHHHhhhccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHC
Confidence 1469999999999999999999999987799999998654
No 200
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.77 E-value=2.2e-08 Score=90.90 Aligned_cols=75 Identities=17% Similarity=0.321 Sum_probs=63.1
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCC-CcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 021397 97 AASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGD-SGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 97 ~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~-~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d 175 (313)
.....++..+++.++++|||+|||+|..|..+++.... .++|+|+|+++.+++.++++. ..+++++++|+..++
T Consensus 29 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-----~~~v~~i~~D~~~~~ 103 (279)
T 3uzu_A 29 GVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-----GELLELHAGDALTFD 103 (279)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-----GGGEEEEESCGGGCC
T ss_pred HHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-----CCCcEEEECChhcCC
Confidence 34455777888999999999999999999999998643 355999999999999999883 237999999998876
Q ss_pred c
Q 021397 176 L 176 (313)
Q Consensus 176 ~ 176 (313)
+
T Consensus 104 ~ 104 (279)
T 3uzu_A 104 F 104 (279)
T ss_dssp G
T ss_pred h
Confidence 5
No 201
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.76 E-value=2.7e-08 Score=84.23 Aligned_cols=55 Identities=33% Similarity=0.351 Sum_probs=44.8
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCCC--------cEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEE-ecCCCCC
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGDS--------GSVTGVDVARHRLAACRTLLQKYALGDRCRLF-VADGTTF 174 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~~--------~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~-~~D~~~~ 174 (313)
++++.+|||+|||+|..+..+++.++.. ++|+|+|+|+.+ .+. +++++ .+|+...
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~~-~~~~~~~~d~~~~ 83 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PLE-GATFLCPADVTDP 83 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CCT-TCEEECSCCTTSH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cCC-CCeEEEeccCCCH
Confidence 6789999999999999999999997643 799999999842 233 68888 8887543
No 202
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.76 E-value=8.2e-08 Score=89.51 Aligned_cols=86 Identities=21% Similarity=0.176 Sum_probs=68.0
Q ss_pred HHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC-CCccccc
Q 021397 102 AVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT-FSLAPLR 180 (313)
Q Consensus 102 ~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~-~d~v~~D 180 (313)
+...++..++.+|||+|||+|..+..+++..+ ...++++|+ +.+++.++++++..++.++++++.+|+.. ++.
T Consensus 175 l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---- 248 (360)
T 1tw3_A 175 PAAAYDWTNVRHVLDVGGGKGGFAAAIARRAP-HVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPR---- 248 (360)
T ss_dssp HHHHSCCTTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSS----
T ss_pred HHHhCCCccCcEEEEeCCcCcHHHHHHHHhCC-CCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCCCC----
Confidence 34556677889999999999999999999865 478999999 99999999999999987789999999864 221
Q ss_pred cccCcccccccccc
Q 021397 181 LLLDPGSCNSVLQE 194 (313)
Q Consensus 181 ~~l~~~s~sg~l~~ 194 (313)
.+|.+.+..++++
T Consensus 249 -~~D~v~~~~vl~~ 261 (360)
T 1tw3_A 249 -KADAIILSFVLLN 261 (360)
T ss_dssp -CEEEEEEESCGGG
T ss_pred -CccEEEEcccccC
Confidence 1444455655543
No 203
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.76 E-value=9.6e-09 Score=91.07 Aligned_cols=51 Identities=18% Similarity=0.107 Sum_probs=43.7
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHh-CCCcEEEEEcCCHHHHHHHHHHHHHc
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDII-GDSGSVTGVDVARHRLAACRTLLQKY 158 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~-~~~~~V~avD~s~~~l~~~~~~~~~~ 158 (313)
..++.+|||+|||+|..+..+++.+ .....|+|+|+|+.+++.+++++...
T Consensus 49 ~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~ 100 (250)
T 1o9g_A 49 GDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALL 100 (250)
T ss_dssp CCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTT
T ss_pred cCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHh
Confidence 3467899999999999999999873 12368999999999999999998776
No 204
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.76 E-value=1.9e-08 Score=90.25 Aligned_cols=74 Identities=16% Similarity=0.226 Sum_probs=63.4
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCc
Q 021397 97 AASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSL 176 (313)
Q Consensus 97 ~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~ 176 (313)
.....++..+++.++++|||+|||+|..|..+++. .++|+|+|+++.+++.++++++. . ++++++++|+..+++
T Consensus 16 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~avEid~~~~~~~~~~~~~--~-~~v~~i~~D~~~~~~ 89 (255)
T 3tqs_A 16 FVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTE---CDNLALVEIDRDLVAFLQKKYNQ--Q-KNITIYQNDALQFDF 89 (255)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTT---SSEEEEEECCHHHHHHHHHHHTT--C-TTEEEEESCTTTCCG
T ss_pred HHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHhh--C-CCcEEEEcchHhCCH
Confidence 34556777889999999999999999999999975 26899999999999999998865 2 379999999988764
No 205
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.75 E-value=4.7e-08 Score=88.55 Aligned_cols=63 Identities=16% Similarity=0.139 Sum_probs=47.6
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcC-CHHHHHHHHHHH-----HHcCCC----CcEEEEecCCC
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDV-ARHRLAACRTLL-----QKYALG----DRCRLFVADGT 172 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~-s~~~l~~~~~~~-----~~~g~~----~~v~~~~~D~~ 172 (313)
..+|.+|||+|||+|..+..+++. + ..+|+|+|+ |+.+++.+++|+ +..++. +++++...|..
T Consensus 77 ~~~~~~vLDlG~G~G~~~~~~a~~-~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~ 149 (281)
T 3bzb_A 77 LIAGKTVCELGAGAGLVSIVAFLA-G-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWG 149 (281)
T ss_dssp GTTTCEEEETTCTTSHHHHHHHHT-T-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTT
T ss_pred hcCCCeEEEecccccHHHHHHHHc-C-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCC
Confidence 457889999999999999988874 3 358999999 899999999999 556653 36778765543
No 206
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.75 E-value=9.2e-09 Score=88.71 Aligned_cols=81 Identities=23% Similarity=0.133 Sum_probs=58.8
Q ss_pred HHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccc-cc-
Q 021397 103 VSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAP-LR- 180 (313)
Q Consensus 103 ~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~-~D- 180 (313)
...+...++.+|||+|||+|..+..+++. ...|+|+|+|+.+++.++++ .++.+...|+..++... .+
T Consensus 45 ~~~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~ 114 (227)
T 3e8s_A 45 LLAILGRQPERVLDLGCGEGWLLRALADR---GIEAVGVDGDRTLVDAARAA-------GAGEVHLASYAQLAEAKVPVG 114 (227)
T ss_dssp HHHHHHTCCSEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHT-------CSSCEEECCHHHHHTTCSCCC
T ss_pred HHHhhcCCCCEEEEeCCCCCHHHHHHHHC---CCEEEEEcCCHHHHHHHHHh-------cccccchhhHHhhcccccccC
Confidence 33444566799999999999999999876 36899999999999999876 24667888876552111 12
Q ss_pred cccCccccccccc
Q 021397 181 LLLDPGSCNSVLQ 193 (313)
Q Consensus 181 ~~l~~~s~sg~l~ 193 (313)
..||.+.|..++.
T Consensus 115 ~~fD~v~~~~~l~ 127 (227)
T 3e8s_A 115 KDYDLICANFALL 127 (227)
T ss_dssp CCEEEEEEESCCC
T ss_pred CCccEEEECchhh
Confidence 3356667776665
No 207
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.74 E-value=3.8e-08 Score=96.00 Aligned_cols=69 Identities=16% Similarity=0.157 Sum_probs=59.2
Q ss_pred HhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 021397 104 SALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 104 ~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d 175 (313)
..+...++.+|||+|||+|..+..+++. + ..+|+|+|+|+ +++.++++++.+|+.++++++.+|+..++
T Consensus 152 ~~l~~~~~~~VLDiGcGtG~la~~la~~-~-~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~ 220 (480)
T 3b3j_A 152 QNHTDFKDKIVLDVGCGSGILSFFAAQA-G-ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS 220 (480)
T ss_dssp HTGGGTTTCEEEEESCSTTHHHHHHHHT-T-CSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCC
T ss_pred HhhhhcCCCEEEEecCcccHHHHHHHHc-C-CCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCc
Confidence 3445567899999999999999988873 3 36999999998 99999999999999778999999997754
No 208
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.74 E-value=4.1e-08 Score=87.61 Aligned_cols=61 Identities=23% Similarity=0.348 Sum_probs=53.7
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT 173 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~ 173 (313)
++++.+|||+|||+|..+..+++. + .+|+|+|+++.+++.+++|++++++. +++..+|+..
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~-g--~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~ 178 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKL-G--GKALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEA 178 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT-T--CEEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHH
T ss_pred cCCCCEEEEecCCCcHHHHHHHHh-C--CeEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhh
Confidence 578899999999999999988874 3 39999999999999999999999874 8889888754
No 209
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.73 E-value=3.3e-08 Score=85.37 Aligned_cols=83 Identities=19% Similarity=0.200 Sum_probs=60.9
Q ss_pred HHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccccccc
Q 021397 103 VSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLRLL 182 (313)
Q Consensus 103 ~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D~~ 182 (313)
...+. .++.+|||+|||+|..+..+++. + ..|+++|+|+.+++.++++. ..++.+|+..+.....+..
T Consensus 26 ~~~~~-~~~~~vLdiG~G~G~~~~~l~~~-~--~~~~~~D~~~~~~~~~~~~~--------~~~~~~d~~~~~~~~~~~~ 93 (230)
T 3cc8_A 26 LKHIK-KEWKEVLDIGCSSGALGAAIKEN-G--TRVSGIEAFPEAAEQAKEKL--------DHVVLGDIETMDMPYEEEQ 93 (230)
T ss_dssp HTTCC-TTCSEEEEETCTTSHHHHHHHTT-T--CEEEEEESSHHHHHHHHTTS--------SEEEESCTTTCCCCSCTTC
T ss_pred HHHhc-cCCCcEEEeCCCCCHHHHHHHhc-C--CeEEEEeCCHHHHHHHHHhC--------CcEEEcchhhcCCCCCCCc
Confidence 34444 67899999999999999999886 3 79999999999999888643 2578888876433223345
Q ss_pred cCccccccccccccc
Q 021397 183 LDPGSCNSVLQEKDD 197 (313)
Q Consensus 183 l~~~s~sg~l~~~p~ 197 (313)
||.+.+..++.+.++
T Consensus 94 fD~v~~~~~l~~~~~ 108 (230)
T 3cc8_A 94 FDCVIFGDVLEHLFD 108 (230)
T ss_dssp EEEEEEESCGGGSSC
T ss_pred cCEEEECChhhhcCC
Confidence 565577776655543
No 210
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.73 E-value=5.2e-08 Score=89.16 Aligned_cols=79 Identities=14% Similarity=0.126 Sum_probs=65.4
Q ss_pred EEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 021397 92 IYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADG 171 (313)
Q Consensus 92 ~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~ 171 (313)
|.....-...++..+++.++++|||+|||+|..|..+++. ..+|+|+|+++.+++.++++++. . ++++++++|+
T Consensus 32 fL~d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~---~~~V~aVEid~~li~~a~~~~~~--~-~~v~vi~gD~ 105 (295)
T 3gru_A 32 FLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKN---AKKVYVIEIDKSLEPYANKLKEL--Y-NNIEIIWGDA 105 (295)
T ss_dssp EECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCGGGHHHHHHHHHH--C-SSEEEEESCT
T ss_pred ccCCHHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHhcc--C-CCeEEEECch
Confidence 3333344556777888999999999999999999999987 36899999999999999999873 3 3799999999
Q ss_pred CCCCc
Q 021397 172 TTFSL 176 (313)
Q Consensus 172 ~~~d~ 176 (313)
..++.
T Consensus 106 l~~~~ 110 (295)
T 3gru_A 106 LKVDL 110 (295)
T ss_dssp TTSCG
T ss_pred hhCCc
Confidence 87653
No 211
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.73 E-value=3.1e-08 Score=95.15 Aligned_cols=62 Identities=16% Similarity=0.237 Sum_probs=55.9
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
+.++++|||+|||+|..+..+|+. ...|+|+|+|+.+++.+++|++.+|+. ++++.+|+..+
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~---~~~V~gvD~s~~ai~~A~~n~~~ngl~--v~~~~~d~~~~ 349 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR---GFNVKGFDSNEFAIEMARRNVEINNVD--AEFEVASDREV 349 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCC--EEEEECCTTTC
T ss_pred cCCCCEEEEeeccchHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChHHc
Confidence 577899999999999999999985 358999999999999999999999984 99999998754
No 212
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.72 E-value=2.7e-08 Score=88.39 Aligned_cols=79 Identities=10% Similarity=0.177 Sum_probs=66.3
Q ss_pred EEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 021397 92 IYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADG 171 (313)
Q Consensus 92 ~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~ 171 (313)
|..+......++..+++.++++|||+|||+|..|..+++.. ++|+|+|+|+.+++.++++++.. ++++++++|+
T Consensus 12 fl~d~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~---~~v~~~~~D~ 85 (244)
T 1qam_A 12 FITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC---NFVTAIEIDHKLCKTTENKLVDH---DNFQVLNKDI 85 (244)
T ss_dssp BCCCHHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHTTTC---CSEEEECCCG
T ss_pred ccCCHHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC---CeEEEEECCHHHHHHHHHhhccC---CCeEEEEChH
Confidence 44555566677788888899999999999999999999873 68999999999999999887542 3799999999
Q ss_pred CCCCc
Q 021397 172 TTFSL 176 (313)
Q Consensus 172 ~~~d~ 176 (313)
..++.
T Consensus 86 ~~~~~ 90 (244)
T 1qam_A 86 LQFKF 90 (244)
T ss_dssp GGCCC
T ss_pred HhCCc
Confidence 87654
No 213
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.72 E-value=6.3e-08 Score=90.02 Aligned_cols=117 Identities=19% Similarity=0.120 Sum_probs=83.4
Q ss_pred HhcCCCC-CCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccccccc
Q 021397 104 SALNISA-GDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLRLL 182 (313)
Q Consensus 104 ~~l~~~~-g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D~~ 182 (313)
..++..+ +.+|||+|||+|..+..+++..++ .+++++|+ +.+++.+++++.+.++.++++++.+|+...+.. .+..
T Consensus 172 ~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~ 248 (352)
T 3mcz_A 172 SELGVFARARTVIDLAGGHGTYLAQVLRRHPQ-LTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNF-EGGA 248 (352)
T ss_dssp HTCGGGTTCCEEEEETCTTCHHHHHHHHHCTT-CEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGG-TTCC
T ss_pred HhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCC-CeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCccc-CCCC
Confidence 3445556 889999999999999999998764 79999999 889999999999999877899999998765410 1222
Q ss_pred cCcccccccccccccccccccccchhHHHHHHHHHHHHHhhhhhccccCcceeEeecCCcEEEEEcCC
Q 021397 183 LDPGSCNSVLQEKDDTFREWTSRIPWKERKRAVKARENAASKAIVRSEHPELIFYGRRSGIVGLTKEE 250 (313)
Q Consensus 183 l~~~s~sg~l~~~p~~~~~w~~~~~~~~~~~~~q~~~l~~~~~~~r~~~~El~~~~k~gG~lvysTcs 250 (313)
+|.+.+..+++..++- ...+++.+..++++ |||+++.....
T Consensus 249 ~D~v~~~~vlh~~~~~----------------~~~~~l~~~~~~L~-----------pgG~l~i~e~~ 289 (352)
T 3mcz_A 249 ADVVMLNDCLHYFDAR----------------EAREVIGHAAGLVK-----------PGGALLILTMT 289 (352)
T ss_dssp EEEEEEESCGGGSCHH----------------HHHHHHHHHHHTEE-----------EEEEEEEEEEC
T ss_pred ccEEEEecccccCCHH----------------HHHHHHHHHHHHcC-----------CCCEEEEEEec
Confidence 4444666666543321 01233344455554 59998887765
No 214
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.71 E-value=3.3e-08 Score=82.65 Aligned_cols=64 Identities=20% Similarity=0.108 Sum_probs=51.4
Q ss_pred cHHHHHHHHhcCC--CCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 021397 96 DAASGAAVSALNI--SAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT 173 (313)
Q Consensus 96 d~ss~~~~~~l~~--~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~ 173 (313)
.+.+..++..++. .++.+|||+|||+|..+..+++.. .|+|+|+|+.+++. .++++++++|+..
T Consensus 7 ~~~~~~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~----------~~~~~~~~~d~~~ 72 (170)
T 3q87_B 7 GEDTYTLMDALEREGLEMKIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES----------HRGGNLVRADLLC 72 (170)
T ss_dssp CHHHHHHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT----------CSSSCEEECSTTT
T ss_pred CccHHHHHHHHHhhcCCCCeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc----------ccCCeEEECChhh
Confidence 4455555555655 678899999999999999998752 89999999999987 2368899999864
No 215
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.71 E-value=2e-08 Score=95.82 Aligned_cols=72 Identities=11% Similarity=0.092 Sum_probs=62.0
Q ss_pred CCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHc--CCCCcEEEEecCCC---------CCCcc
Q 021397 109 SAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKY--ALGDRCRLFVADGT---------TFSLA 177 (313)
Q Consensus 109 ~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~--g~~~~v~~~~~D~~---------~~d~v 177 (313)
.+|.+|||+|||+|..++.+++. ..+|+++|+|+.+++.+++|++.+ |+ ++++++++|+. .||.+
T Consensus 92 ~~g~~VLDLgcG~G~~al~LA~~---g~~V~~VD~s~~~l~~Ar~N~~~~~~gl-~~i~~i~~Da~~~L~~~~~~~fDvV 167 (410)
T 3ll7_A 92 REGTKVVDLTGGLGIDFIALMSK---ASQGIYIERNDETAVAARHNIPLLLNEG-KDVNILTGDFKEYLPLIKTFHPDYI 167 (410)
T ss_dssp CTTCEEEESSCSSSHHHHHHHTT---CSEEEEEESCHHHHHHHHHHHHHHSCTT-CEEEEEESCGGGSHHHHHHHCCSEE
T ss_pred CCCCEEEEeCCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHhHHHhccCC-CcEEEEECcHHHhhhhccCCCceEE
Confidence 35899999999999999999875 369999999999999999999999 88 48999999985 46777
Q ss_pred ccccccC
Q 021397 178 PLRLLLD 184 (313)
Q Consensus 178 ~~D~~l~ 184 (313)
++||-+.
T Consensus 168 ~lDPPrr 174 (410)
T 3ll7_A 168 YVDPARR 174 (410)
T ss_dssp EECCEEC
T ss_pred EECCCCc
Confidence 7786543
No 216
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.71 E-value=3.6e-08 Score=91.03 Aligned_cols=87 Identities=16% Similarity=0.116 Sum_probs=67.1
Q ss_pred HHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccccc
Q 021397 101 AAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLR 180 (313)
Q Consensus 101 ~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D 180 (313)
.+...++..+ .+|||+|||+|..+..+++..++ .+++++|+ +.+++.+++++.+.++.++++++.+|+.. +. .
T Consensus 159 ~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~---~ 231 (334)
T 2ip2_A 159 EIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPS-ARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EV---P 231 (334)
T ss_dssp HHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTT-CEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CC---C
T ss_pred HHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCC-CEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CC---C
Confidence 3444556666 89999999999999999998753 69999999 99999999999888876689999999865 21 1
Q ss_pred cccCcccccccccc
Q 021397 181 LLLDPGSCNSVLQE 194 (313)
Q Consensus 181 ~~l~~~s~sg~l~~ 194 (313)
..+|.+.+..++++
T Consensus 232 ~~~D~v~~~~vl~~ 245 (334)
T 2ip2_A 232 SNGDIYLLSRIIGD 245 (334)
T ss_dssp SSCSEEEEESCGGG
T ss_pred CCCCEEEEchhccC
Confidence 23444466665543
No 217
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.71 E-value=1.4e-07 Score=89.57 Aligned_cols=91 Identities=14% Similarity=0.066 Sum_probs=71.0
Q ss_pred cccccCCeEEEec------HHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCC-----------------------
Q 021397 84 SMAYKQGKIYGID------AASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGD----------------------- 134 (313)
Q Consensus 84 ~~~~~~G~~~~Qd------~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~----------------------- 134 (313)
.+.++.||-..|. .-+..+..+.+.+++..|||.|||+|+.++.+|....+
T Consensus 169 ~~L~krgyr~~~~~Apl~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~ 248 (393)
T 3k0b_A 169 AGLHKRGYRLAQGSAPIKETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWA 248 (393)
T ss_dssp SCTTCCSTTTTSCSCSCCHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHH
T ss_pred CcccccccccCCCCCCCcHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHH
Confidence 3456666643332 22333456677888999999999999999998886543
Q ss_pred --------------CcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 135 --------------SGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 135 --------------~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
...|+|+|+++.+++.+++|++.+|+.++++++++|+..+
T Consensus 249 ~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~ 302 (393)
T 3k0b_A 249 DARQEAEDLANYDQPLNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADF 302 (393)
T ss_dssp HHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGC
T ss_pred HHHHHHHHhhcccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhC
Confidence 1469999999999999999999999977799999998654
No 218
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.70 E-value=5.4e-08 Score=91.91 Aligned_cols=65 Identities=23% Similarity=0.284 Sum_probs=56.5
Q ss_pred CCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCc
Q 021397 109 SAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSL 176 (313)
Q Consensus 109 ~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~ 176 (313)
.+|..|||+|||+|..+..+|+. + ..+|+|+|.|+ +++.++++++.+|+.++|+++.+|++.++.
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~a-G-A~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~l 146 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQA-G-ARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVEL 146 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCC
T ss_pred cCCCEEEEeCCCccHHHHHHHHh-C-CCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecC
Confidence 37899999999999999877764 3 35899999996 889999999999998899999999987653
No 219
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.68 E-value=1.4e-07 Score=88.45 Aligned_cols=81 Identities=16% Similarity=0.062 Sum_probs=64.1
Q ss_pred CCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC--ccccccccCcc
Q 021397 109 SAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFS--LAPLRLLLDPG 186 (313)
Q Consensus 109 ~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d--~v~~D~~l~~~ 186 (313)
..+.+|||+|||+|..+..+++..++ .+++++|+ +.+++.++++++..++.++++++.+|+.... +. ..+|.+
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p---~~~D~v 252 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKE-VEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP---TGFDAV 252 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTT-CEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC---CCCSEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCC-CEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC---CCcCEE
Confidence 45689999999999999999998754 69999999 9999999999998888678999999987642 21 123434
Q ss_pred cccccccc
Q 021397 187 SCNSVLQE 194 (313)
Q Consensus 187 s~sg~l~~ 194 (313)
.+..+++.
T Consensus 253 ~~~~vlh~ 260 (363)
T 3dp7_A 253 WMSQFLDC 260 (363)
T ss_dssp EEESCSTT
T ss_pred EEechhhh
Confidence 55555543
No 220
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.65 E-value=8.1e-08 Score=83.75 Aligned_cols=59 Identities=12% Similarity=0.164 Sum_probs=50.3
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCC-CCC
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGT-TFS 175 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~-~~d 175 (313)
+.++.+|||+|||+|..+..+++. ...|+|+|+|+.+++.++++ . .+++++++|+. .++
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-----~-~~~~~~~~d~~~~~~ 105 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQ---AARWAAYDFSPELLKLARAN-----A-PHADVYEWNGKGELP 105 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHH-----C-TTSEEEECCSCSSCC
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHh-----C-CCceEEEcchhhccC
Confidence 367899999999999999999986 36999999999999999987 2 26899999984 443
No 221
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.65 E-value=1.5e-07 Score=78.82 Aligned_cols=71 Identities=15% Similarity=0.120 Sum_probs=55.3
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccccccccCccc
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLRLLLDPGS 187 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D~~l~~~s 187 (313)
+.++.+|||+|||+|..+..+++. ...|+++|+++.+++.+++++ . ++.++.+|+..++.. +..||.+.
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~-----~-~~~~~~~d~~~~~~~--~~~~D~i~ 112 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ---GHDVLGTDLDPILIDYAKQDF-----P-EARWVVGDLSVDQIS--ETDFDLIV 112 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHC-----T-TSEEEECCTTTSCCC--CCCEEEEE
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC---CCcEEEEcCCHHHHHHHHHhC-----C-CCcEEEcccccCCCC--CCceeEEE
Confidence 468899999999999999999986 368999999999999998765 2 578999998775431 23344445
Q ss_pred cc
Q 021397 188 CN 189 (313)
Q Consensus 188 ~s 189 (313)
+.
T Consensus 113 ~~ 114 (195)
T 3cgg_A 113 SA 114 (195)
T ss_dssp EC
T ss_pred EC
Confidence 54
No 222
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.63 E-value=1.1e-07 Score=84.68 Aligned_cols=71 Identities=15% Similarity=0.069 Sum_probs=53.9
Q ss_pred CCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccccccccCccccc
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLRLLLDPGSCN 189 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D~~l~~~s~s 189 (313)
++.+|||+|||+|..+..+++. ...|+++|+|+.+++.++++.. .+ ++.+|+..++. .+..||.+.+.
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~-----~~--~~~~d~~~~~~--~~~~fD~v~~~ 121 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER---GFEVVLVDPSKEMLEVAREKGV-----KN--VVEAKAEDLPF--PSGAFEAVLAL 121 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHHTC-----SC--EEECCTTSCCS--CTTCEEEEEEC
T ss_pred CCCeEEEeCCCcCHHHHHHHHc---CCeEEEEeCCHHHHHHHHhhcC-----CC--EEECcHHHCCC--CCCCEEEEEEc
Confidence 7889999999999999999875 3689999999999999987643 12 78888877653 23344444555
Q ss_pred ccc
Q 021397 190 SVL 192 (313)
Q Consensus 190 g~l 192 (313)
+.+
T Consensus 122 ~~~ 124 (260)
T 2avn_A 122 GDV 124 (260)
T ss_dssp SSH
T ss_pred chh
Confidence 543
No 223
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.63 E-value=9.4e-08 Score=78.62 Aligned_cols=56 Identities=23% Similarity=0.248 Sum_probs=47.1
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d 175 (313)
++++.+|||+|||+|..+..+++.++....|+++|+++ +++. .+++++.+|+...+
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-----------~~~~~~~~d~~~~~ 75 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-----------VGVDFLQGDFRDEL 75 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-----------TTEEEEESCTTSHH
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-----------CcEEEEEcccccch
Confidence 67899999999999999999999876557999999999 6532 36899999987643
No 224
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.62 E-value=1.7e-08 Score=96.00 Aligned_cols=84 Identities=20% Similarity=0.159 Sum_probs=63.9
Q ss_pred cCCeEEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEE
Q 021397 88 KQGKIYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLF 167 (313)
Q Consensus 88 ~~G~~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~ 167 (313)
..|.++--+.-+..++..+.+.++.+|||+|||+|+.+..+++..+....|+|+|+++.+++.+ .++.++
T Consensus 17 ~~g~~~TP~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----------~~~~~~ 86 (421)
T 2ih2_A 17 SLGRVETPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----------PWAEGI 86 (421)
T ss_dssp ----CCCCHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----------TTEEEE
T ss_pred cCceEeCCHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----------CCCcEE
Confidence 3466666666677778888776778999999999999999999875457999999999998766 268999
Q ss_pred ecCCCC------CCcccccc
Q 021397 168 VADGTT------FSLAPLRL 181 (313)
Q Consensus 168 ~~D~~~------~d~v~~D~ 181 (313)
++|+.. ||.+..+|
T Consensus 87 ~~D~~~~~~~~~fD~Ii~NP 106 (421)
T 2ih2_A 87 LADFLLWEPGEAFDLILGNP 106 (421)
T ss_dssp ESCGGGCCCSSCEEEEEECC
T ss_pred eCChhhcCccCCCCEEEECc
Confidence 999854 45555553
No 225
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.62 E-value=6.1e-08 Score=87.60 Aligned_cols=74 Identities=19% Similarity=0.163 Sum_probs=62.1
Q ss_pred ecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 95 IDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 95 Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
+......++..+++.++ +|||+|||+|..|..+++.. ++|+|+|+++.+++.+++++. + .+++++++|+..+
T Consensus 32 d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~---~~V~avEid~~~~~~l~~~~~--~--~~v~vi~~D~l~~ 103 (271)
T 3fut_A 32 SEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAG---AEVTAIEKDLRLRPVLEETLS--G--LPVRLVFQDALLY 103 (271)
T ss_dssp CHHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTT---CCEEEEESCGGGHHHHHHHTT--T--SSEEEEESCGGGS
T ss_pred CHHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcC--C--CCEEEEECChhhC
Confidence 33445567788889999 99999999999999999862 689999999999999998875 2 3799999999876
Q ss_pred Cc
Q 021397 175 SL 176 (313)
Q Consensus 175 d~ 176 (313)
+.
T Consensus 104 ~~ 105 (271)
T 3fut_A 104 PW 105 (271)
T ss_dssp CG
T ss_pred Ch
Confidence 54
No 226
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.60 E-value=1.6e-08 Score=89.68 Aligned_cols=85 Identities=13% Similarity=0.008 Sum_probs=60.7
Q ss_pred CCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCC--------------------------
Q 021397 107 NISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYAL-------------------------- 160 (313)
Q Consensus 107 ~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~-------------------------- 160 (313)
...++.+|||+|||+|..+..+++.. . ..|+|+|+|+.+++.++++++..+.
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~-~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACES-F-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEE 130 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGT-E-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhcc-c-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHH
Confidence 34678899999999999999888642 1 4899999999999999988765431
Q ss_pred --CCcE-EEEecCCCCCCcc-ccc-cccCccccccccc
Q 021397 161 --GDRC-RLFVADGTTFSLA-PLR-LLLDPGSCNSVLQ 193 (313)
Q Consensus 161 --~~~v-~~~~~D~~~~d~v-~~D-~~l~~~s~sg~l~ 193 (313)
..++ .++.+|+...+.. ... ..||.+.|..++.
T Consensus 131 ~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~ 168 (265)
T 2i62_A 131 KLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLD 168 (265)
T ss_dssp HHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHH
T ss_pred HhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhh
Confidence 0127 8999998775431 111 3455556666654
No 227
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.60 E-value=4.8e-08 Score=83.32 Aligned_cols=61 Identities=23% Similarity=0.304 Sum_probs=52.0
Q ss_pred CCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 021397 107 NISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 107 ~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d 175 (313)
.+.++.+|||+|||+|..+..+++. + ...|+|+|+|+.+++.++++++ +++++++|+..++
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~~~~------~~~~~~~d~~~~~ 108 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLL-G-AESVTAFDIDPDAIETAKRNCG------GVNFMVADVSEIS 108 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHT-T-BSEEEEEESCHHHHHHHHHHCT------TSEEEECCGGGCC
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHhcC------CCEEEECcHHHCC
Confidence 4667899999999999999999876 3 3579999999999999998864 5789999987643
No 228
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.59 E-value=1.2e-07 Score=91.57 Aligned_cols=96 Identities=18% Similarity=0.212 Sum_probs=75.7
Q ss_pred cCCeEEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhC------------CCcEEEEEcCCHHHHHHHHHHH
Q 021397 88 KQGKIYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIG------------DSGSVTGVDVARHRLAACRTLL 155 (313)
Q Consensus 88 ~~G~~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~------------~~~~V~avD~s~~~l~~~~~~~ 155 (313)
..|.++--..-+.+++..+.++++.+|||.|||+|++...+++.+. ....++|+|+++.+++.++.|+
T Consensus 149 ~~G~fyTP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl 228 (445)
T 2okc_A 149 GAGQYFTPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNL 228 (445)
T ss_dssp CCGGGCCCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHH
T ss_pred cCCcccCcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHH
Confidence 3466665566677788889999999999999999999999988752 1257999999999999999999
Q ss_pred HHcCCCC-cEEEEecCCCC------CCcccccccc
Q 021397 156 QKYALGD-RCRLFVADGTT------FSLAPLRLLL 183 (313)
Q Consensus 156 ~~~g~~~-~v~~~~~D~~~------~d~v~~D~~l 183 (313)
..+|+.. ++.+.++|+.. ||+++.+|.|
T Consensus 229 ~l~g~~~~~~~i~~gD~l~~~~~~~fD~Iv~NPPf 263 (445)
T 2okc_A 229 YLHGIGTDRSPIVCEDSLEKEPSTLVDVILANPPF 263 (445)
T ss_dssp HHTTCCSSCCSEEECCTTTSCCSSCEEEEEECCCS
T ss_pred HHhCCCcCCCCEeeCCCCCCcccCCcCEEEECCCC
Confidence 9888742 47789999753 5556666443
No 229
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.58 E-value=4.8e-08 Score=87.69 Aligned_cols=82 Identities=20% Similarity=0.179 Sum_probs=65.2
Q ss_pred HHHHHHhcCCCCC--CEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcC--------CCCcEEEEe
Q 021397 99 SGAAVSALNISAG--DHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYA--------LGDRCRLFV 168 (313)
Q Consensus 99 s~~~~~~l~~~~g--~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g--------~~~~v~~~~ 168 (313)
...+..++.+++| .+|||+|||.|..++.+|+. + ++|+++|+++.+.+.+++++++.. +.+++++++
T Consensus 75 ~e~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~-g--~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~ 151 (258)
T 2oyr_A 75 GEAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASV-G--CRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIH 151 (258)
T ss_dssp GSHHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHH-T--CCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEE
T ss_pred HHHHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHc-C--CEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEE
Confidence 4556677888888 99999999999999999987 2 579999999999888888876542 323799999
Q ss_pred cCCC--------CCCcccccccc
Q 021397 169 ADGT--------TFSLAPLRLLL 183 (313)
Q Consensus 169 ~D~~--------~~d~v~~D~~l 183 (313)
+|+. .||.+.+||-|
T Consensus 152 ~D~~~~L~~~~~~fDvV~lDP~y 174 (258)
T 2oyr_A 152 ASSLTALTDITPRPQVVYLDPMF 174 (258)
T ss_dssp SCHHHHSTTCSSCCSEEEECCCC
T ss_pred CCHHHHHHhCcccCCEEEEcCCC
Confidence 9973 36666777654
No 230
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.56 E-value=7.8e-08 Score=85.82 Aligned_cols=78 Identities=14% Similarity=0.269 Sum_probs=63.4
Q ss_pred EEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 021397 92 IYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADG 171 (313)
Q Consensus 92 ~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~ 171 (313)
|.....-...++..+++.++++|||+|||+|..|..+++. + ..+|+|+|+++.+++.++++ +. .+++++++|+
T Consensus 13 fl~d~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~-~-~~~v~avEid~~~~~~~~~~----~~-~~v~~i~~D~ 85 (249)
T 3ftd_A 13 LLVSEGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQH-P-LKKLYVIELDREMVENLKSI----GD-ERLEVINEDA 85 (249)
T ss_dssp CEECHHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTS-C-CSEEEEECCCHHHHHHHTTS----CC-TTEEEECSCT
T ss_pred ccCCHHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHc-C-CCeEEEEECCHHHHHHHHhc----cC-CCeEEEEcch
Confidence 3333444556777888999999999999999999999875 2 36999999999999999876 22 3799999999
Q ss_pred CCCCc
Q 021397 172 TTFSL 176 (313)
Q Consensus 172 ~~~d~ 176 (313)
..+++
T Consensus 86 ~~~~~ 90 (249)
T 3ftd_A 86 SKFPF 90 (249)
T ss_dssp TTCCG
T ss_pred hhCCh
Confidence 87764
No 231
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.56 E-value=1.2e-07 Score=85.73 Aligned_cols=64 Identities=20% Similarity=0.110 Sum_probs=52.4
Q ss_pred CCEEEEECCCc--ChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 021397 111 GDHVLDLCAAP--GAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 111 g~~VLDlcagp--G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d 175 (313)
-.+|||+|||+ |+.+..+++...+..+|+++|.|+.|++.+++++...+. .+++++++|++.++
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~-~~~~~v~aD~~~~~ 144 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPE-GRTAYVEADMLDPA 144 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSS-SEEEEEECCTTCHH
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCC-CcEEEEEecccChh
Confidence 36899999997 667777877665568999999999999999988765433 37999999998753
No 232
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.56 E-value=1.1e-07 Score=81.35 Aligned_cols=57 Identities=12% Similarity=0.067 Sum_probs=50.3
Q ss_pred CCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEE
Q 021397 109 SAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRL 166 (313)
Q Consensus 109 ~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~ 166 (313)
.+.++|||+|||+|..++.++...+. .+|+|+|+|+.|++.+++++++.|..+++++
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~-a~~~A~Di~~~~leiar~~~~~~g~~~~v~~ 104 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEK-IIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF 104 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCC-CEEEEECSCHHHHHHHHHHHHHSCCSSEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCC-CEEEEEeCCHHHHHHHHHHHHhcCCCccEEE
Confidence 45789999999999999999877654 5999999999999999999999998756766
No 233
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.56 E-value=1.3e-07 Score=86.38 Aligned_cols=65 Identities=26% Similarity=0.382 Sum_probs=53.3
Q ss_pred CCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcC---C-CCcEEEEecCCCCC
Q 021397 109 SAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYA---L-GDRCRLFVADGTTF 174 (313)
Q Consensus 109 ~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g---~-~~~v~~~~~D~~~~ 174 (313)
.++.+|||+|||+|+.+..+++..+ ..+|+++|+++.+++.+++++...+ + ..+++++.+|+..+
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~ 150 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKN-VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNF 150 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTT-CCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC-
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHH
Confidence 3467999999999999999998643 4689999999999999999987652 1 23799999998654
No 234
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.55 E-value=9.9e-08 Score=86.51 Aligned_cols=62 Identities=19% Similarity=0.337 Sum_probs=52.1
Q ss_pred CCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHc--CC--------CCcEEEEecCCCC
Q 021397 109 SAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKY--AL--------GDRCRLFVADGTT 173 (313)
Q Consensus 109 ~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~--g~--------~~~v~~~~~D~~~ 173 (313)
.++.+|||+|||+|+.+..+++. + ..+|+++|+++.+++.+++++ +. ++ ..+++++.+|+..
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~-~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~ 145 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-D-VDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFE 145 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-C-CSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHH
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-C-CCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHH
Confidence 45689999999999999999987 4 479999999999999999988 44 32 3479999999743
No 235
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.55 E-value=1.5e-07 Score=83.95 Aligned_cols=60 Identities=18% Similarity=0.239 Sum_probs=51.2
Q ss_pred CCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 021397 109 SAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 109 ~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d 175 (313)
.++.+|||+|||+|..+..+++.++ ...|+++|+|+.+++.++++. .++.++.+|+..++
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~ 143 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALP-EITTFGLDVSKVAIKAAAKRY------PQVTFCVASSHRLP 143 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCT-TSEEEEEESCHHHHHHHHHHC------TTSEEEECCTTSCS
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHhC------CCcEEEEcchhhCC
Confidence 5789999999999999999998764 368999999999999988653 25789999987765
No 236
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.54 E-value=9e-08 Score=85.59 Aligned_cols=74 Identities=18% Similarity=0.174 Sum_probs=58.8
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCc
Q 021397 97 AASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSL 176 (313)
Q Consensus 97 ~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~ 176 (313)
.-...++..+++.+|++|||+|||+|..|. ++. ....+|+|+|+++.+++.++++++.. ++++++++|+..+++
T Consensus 8 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~--~~~~~v~avEid~~~~~~a~~~~~~~---~~v~~i~~D~~~~~~ 81 (252)
T 1qyr_A 8 FVIDSIVSAINPQKGQAMVEIGPGLAALTE-PVG--ERLDQLTVIELDRDLAARLQTHPFLG---PKLTIYQQDAMTFNF 81 (252)
T ss_dssp HHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HHH--TTCSCEEEECCCHHHHHHHHTCTTTG---GGEEEECSCGGGCCH
T ss_pred HHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hhh--CCCCeEEEEECCHHHHHHHHHHhccC---CceEEEECchhhCCH
Confidence 334556677888999999999999999999 653 22233999999999999999876543 379999999987664
No 237
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.53 E-value=1.5e-08 Score=93.10 Aligned_cols=61 Identities=16% Similarity=0.149 Sum_probs=44.6
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcC----CHHHHHHHHHHHHHcCCCCcEEEEec-CCCCCC
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDV----ARHRLAACRTLLQKYALGDRCRLFVA-DGTTFS 175 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~----s~~~l~~~~~~~~~~g~~~~v~~~~~-D~~~~d 175 (313)
+++|.+|||+|||||++|..+++. +.|+|+|+ ++.+++.+. .+..+. +++.++.+ |+..++
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~----~~V~gvD~~~~~~~~~~~~~~--~~~~~~-~~v~~~~~~D~~~l~ 145 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL----KNVREVKGLTKGGPGHEEPIP--MSTYGW-NLVRLQSGVDVFFIP 145 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS----TTEEEEEEECCCSTTSCCCCC--CCSTTG-GGEEEECSCCTTTSC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc----CCEEEEeccccCchhHHHHHH--hhhcCC-CCeEEEeccccccCC
Confidence 568899999999999999999975 57999999 565442211 122232 36899999 887654
No 238
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.52 E-value=1.1e-07 Score=86.04 Aligned_cols=46 Identities=15% Similarity=0.109 Sum_probs=36.1
Q ss_pred CCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHH
Q 021397 109 SAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQ 156 (313)
Q Consensus 109 ~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~ 156 (313)
.++.+|||+|||+|..+..++.. . ...|+|+|+|+.|++.++++++
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~-~-~~~v~gvD~s~~~l~~a~~~~~ 115 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACS-H-FEDITMTDFLEVNRQELGRWLQ 115 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGG-G-CSEEEEECSCHHHHHHHHHHHT
T ss_pred CCCCeEEEECCCcChHHHHhhcc-C-CCeEEEeCCCHHHHHHHHHHHh
Confidence 37889999999999954433332 2 3589999999999999988654
No 239
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.51 E-value=3.2e-07 Score=83.03 Aligned_cols=112 Identities=13% Similarity=0.133 Sum_probs=72.6
Q ss_pred CCCEEEEECCCcCh----HHHHHHHHhCC---CcEEEEEcCCHHHHHHHHHHHH--------------Hc---------C
Q 021397 110 AGDHVLDLCAAPGA----KLCMILDIIGD---SGSVTGVDVARHRLAACRTLLQ--------------KY---------A 159 (313)
Q Consensus 110 ~g~~VLDlcagpG~----kt~~la~~~~~---~~~V~avD~s~~~l~~~~~~~~--------------~~---------g 159 (313)
++.+|||+|||+|- .+..+++..+. ..+|+|+|+|+.+++.|++++- ++ |
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 56667776553 2489999999999999998741 11 0
Q ss_pred ---C----CCcEEEEecCCCCCCccccccccCcccccccccccccccccccccchhHHHHHHHHHHHHHhhhhhccccCc
Q 021397 160 ---L----GDRCRLFVADGTTFSLAPLRLLLDPGSCNSVLQEKDDTFREWTSRIPWKERKRAVKARENAASKAIVRSEHP 232 (313)
Q Consensus 160 ---~----~~~v~~~~~D~~~~d~v~~D~~l~~~s~sg~l~~~p~~~~~w~~~~~~~~~~~~~q~~~l~~~~~~~r~~~~ 232 (313)
+ ..+|.+.++|....++. .+..||.+.|..++...++ ..|.+++....+.+
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~-~~~~fDlI~crnvliyf~~----------------~~~~~vl~~~~~~L----- 242 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYN-VPGPFDAIFCRNVMIYFDK----------------TTQEDILRRFVPLL----- 242 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCC-CCCCEEEEEECSSGGGSCH----------------HHHHHHHHHHGGGE-----
T ss_pred ceeechhhcccCeEEecccCCCCCC-cCCCeeEEEECCchHhCCH----------------HHHHHHHHHHHHHh-----
Confidence 0 12589999998764321 1234666678665532221 12344445555555
Q ss_pred ceeEeecCCcEEEEEcC
Q 021397 233 ELIFYGRRSGIVGLTKE 249 (313)
Q Consensus 233 El~~~~k~gG~lvysTc 249 (313)
+|||.|+....
T Consensus 243 ------~pgG~L~lg~s 253 (274)
T 1af7_A 243 ------KPDGLLFAGHS 253 (274)
T ss_dssp ------EEEEEEEECTT
T ss_pred ------CCCcEEEEEec
Confidence 45999987544
No 240
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.51 E-value=2.7e-07 Score=83.37 Aligned_cols=63 Identities=24% Similarity=0.272 Sum_probs=52.4
Q ss_pred CCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHc--CC-CCcEEEEecCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKY--AL-GDRCRLFVADGTT 173 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~--g~-~~~v~~~~~D~~~ 173 (313)
.+.+|||+|||+|+.+..+++..+ ..+|+++|+++.+++.+++++... ++ .++++++.+|+..
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~ 140 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPS-VKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFM 140 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTT-CSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHH
T ss_pred CCCEEEEECCchHHHHHHHHhCCC-CceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHH
Confidence 468999999999999999987533 469999999999999999988653 33 3479999999853
No 241
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.50 E-value=3.1e-07 Score=90.83 Aligned_cols=96 Identities=7% Similarity=0.006 Sum_probs=74.9
Q ss_pred cCCeEEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCC-----------------cEEEEEcCCHHHHHH
Q 021397 88 KQGKIYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDS-----------------GSVTGVDVARHRLAA 150 (313)
Q Consensus 88 ~~G~~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~-----------------~~V~avD~s~~~l~~ 150 (313)
..|.||--+.-+.+++.++.++++.+|||.|||+|++...+++.+... ..++|+|+++.+++.
T Consensus 147 ~~G~fyTP~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~l 226 (541)
T 2ar0_A 147 GAGQYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRL 226 (541)
T ss_dssp ---CCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHH
T ss_pred cCCeeeCCHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHH
Confidence 347676666667778889999999999999999999999998876321 379999999999999
Q ss_pred HHHHHHHcCCCC----cEEEEecCCC--------CCCcccccccc
Q 021397 151 CRTLLQKYALGD----RCRLFVADGT--------TFSLAPLRLLL 183 (313)
Q Consensus 151 ~~~~~~~~g~~~----~v~~~~~D~~--------~~d~v~~D~~l 183 (313)
++.|+..+|+.. ++.+.++|+. .||+|+.+|.|
T Consensus 227 A~~nl~l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf 271 (541)
T 2ar0_A 227 ALMNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPF 271 (541)
T ss_dssp HHHHHHTTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCC
T ss_pred HHHHHHHhCCCccccccCCeEeCCCcccccccccCCeEEEECCCc
Confidence 999998888752 1778899873 36666677543
No 242
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.50 E-value=1.4e-08 Score=91.49 Aligned_cols=62 Identities=16% Similarity=0.072 Sum_probs=45.0
Q ss_pred CCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHH---HHcCCCCcEEEE--ecCCCCCC
Q 021397 107 NISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLL---QKYALGDRCRLF--VADGTTFS 175 (313)
Q Consensus 107 ~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~---~~~g~~~~v~~~--~~D~~~~d 175 (313)
.+++|.+|||+|||||++|..+++. +.|+|+|+++ ++..++++. +.++ .++.++ ++|+..++
T Consensus 71 ~~~~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~-m~~~a~~~~~~~~~~~--~~v~~~~~~~D~~~l~ 137 (265)
T 2oxt_A 71 YVELTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYT-LGVGGHEVPRITESYG--WNIVKFKSRVDIHTLP 137 (265)
T ss_dssp SCCCCEEEEEESCTTSHHHHHHHTS----TTEEEEEEEC-CCCSSCCCCCCCCBTT--GGGEEEECSCCTTTSC
T ss_pred CCCCCCEEEEeCcCCCHHHHHHHHc----CcEEEEECch-hhhhhhhhhhhhhccC--CCeEEEecccCHhHCC
Confidence 3678999999999999999999875 6799999998 432222110 0111 168888 89998765
No 243
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.50 E-value=2.1e-07 Score=86.57 Aligned_cols=65 Identities=14% Similarity=0.246 Sum_probs=54.1
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHc--CC-CCcEEEEecCCCC
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKY--AL-GDRCRLFVADGTT 173 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~--g~-~~~v~~~~~D~~~ 173 (313)
..++.+|||+|||+|..+..+++..+ ..+|+++|+|+.+++.+++++.+. ++ ..+++++.+|+..
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~~-~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~ 185 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHAS-IEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVA 185 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHH
T ss_pred CCCCCEEEEECCCccHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHH
Confidence 44568999999999999999997643 469999999999999999998764 44 2479999999754
No 244
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.49 E-value=7e-08 Score=95.99 Aligned_cols=84 Identities=19% Similarity=0.133 Sum_probs=68.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccccccccCccccc
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLRLLLDPGSCN 189 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D~~l~~~s~s 189 (313)
.+.+|||+|||.|..+..||++ +..|+|+|+++.+++.|+..+...|.. +|++.++|+..+....-+..||.+.|.
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~---ga~V~giD~~~~~i~~a~~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~fD~v~~~ 141 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASK---GATIVGIDFQQENINVCRALAEENPDF-AAEFRVGRIEEVIAALEEGEFDLAIGL 141 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTSTTS-EEEEEECCHHHHHHHCCTTSCSEEEEE
T ss_pred CCCeEEEECCCCcHHHHHHHhC---CCEEEEECCCHHHHHHHHHHHHhcCCC-ceEEEECCHHHHhhhccCCCccEEEEC
Confidence 5679999999999999999985 368999999999999999998888743 699999998765321123457777999
Q ss_pred cccccccc
Q 021397 190 SVLQEKDD 197 (313)
Q Consensus 190 g~l~~~p~ 197 (313)
+++.+-++
T Consensus 142 e~~ehv~~ 149 (569)
T 4azs_A 142 SVFHHIVH 149 (569)
T ss_dssp SCHHHHHH
T ss_pred cchhcCCC
Confidence 99987665
No 245
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.49 E-value=1.4e-07 Score=86.51 Aligned_cols=66 Identities=18% Similarity=0.202 Sum_probs=53.1
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHc---CCCCcEEEEecCCCCC
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKY---ALGDRCRLFVADGTTF 174 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~---g~~~~v~~~~~D~~~~ 174 (313)
..++.+|||+|||+|+.+..+++.. +..+|+++|+++.+++.+++++... ....+++++.+|+..+
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~ 161 (304)
T 3bwc_A 93 HPKPERVLIIGGGDGGVLREVLRHG-TVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAF 161 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHH
T ss_pred CCCCCeEEEEcCCCCHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHH
Confidence 3567899999999999999998753 3469999999999999999987432 1224799999998543
No 246
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.49 E-value=1.8e-07 Score=85.92 Aligned_cols=65 Identities=17% Similarity=0.224 Sum_probs=53.8
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHH--cCC-CCcEEEEecCCCC
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQK--YAL-GDRCRLFVADGTT 173 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~--~g~-~~~v~~~~~D~~~ 173 (313)
..++.+|||+|||+|+.+..+++..+ ..+|+++|+++.+++.+++++.. .++ ..+++++.+|+..
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~ 160 (304)
T 2o07_A 93 HPNPRKVLIIGGGDGGVLREVVKHPS-VESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFE 160 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHH
Confidence 34568999999999999999987633 47999999999999999999876 233 3479999999853
No 247
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.47 E-value=4.1e-08 Score=86.69 Aligned_cols=43 Identities=26% Similarity=0.300 Sum_probs=37.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHH
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTL 154 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~ 154 (313)
+|.+|||+|||+|+.+..+++. + ..+|+|+|+|+.|++.++++
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~-g-~~~V~gvDis~~ml~~a~~~ 79 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQN-G-AKLVYALDVGTNQLAWKIRS 79 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-T-CSEEEEECSSCCCCCHHHHT
T ss_pred CCCEEEEEccCCCHHHHHHHhc-C-CCEEEEEcCCHHHHHHHHHh
Confidence 4779999999999999999986 3 25999999999999987654
No 248
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.47 E-value=1.3e-08 Score=90.19 Aligned_cols=79 Identities=18% Similarity=0.247 Sum_probs=66.5
Q ss_pred EEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 021397 92 IYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADG 171 (313)
Q Consensus 92 ~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~ 171 (313)
|..+......++..+++.++++|||+|||+|..|..+++.. ++|+|+|+|+.+++.++++++ +. ++++++++|+
T Consensus 11 fl~~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~---~~v~~id~~~~~~~~a~~~~~--~~-~~v~~~~~D~ 84 (245)
T 1yub_A 11 FLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKIS---KQVTSIELDSHLFNLSSEKLK--LN-TRVTLIHQDI 84 (245)
T ss_dssp BCCCTTTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHS---SEEEESSSSCSSSSSSSCTTT--TC-SEEEECCSCC
T ss_pred CCCCHHHHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhC---CeEEEEECCHHHHHHHHHHhc--cC-CceEEEECCh
Confidence 45566667778888889999999999999999999999872 689999999999999988765 22 4799999999
Q ss_pred CCCCc
Q 021397 172 TTFSL 176 (313)
Q Consensus 172 ~~~d~ 176 (313)
..++.
T Consensus 85 ~~~~~ 89 (245)
T 1yub_A 85 LQFQF 89 (245)
T ss_dssp TTTTC
T ss_pred hhcCc
Confidence 87663
No 249
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.47 E-value=2.6e-08 Score=90.32 Aligned_cols=64 Identities=16% Similarity=0.044 Sum_probs=45.2
Q ss_pred CCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHH-HHcCCCCcEEEE--ecCCCCCC
Q 021397 107 NISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLL-QKYALGDRCRLF--VADGTTFS 175 (313)
Q Consensus 107 ~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~-~~~g~~~~v~~~--~~D~~~~d 175 (313)
.+++|.+|||+|||||++|..+++. +.|+|+|+++ ++..++++. .......++.++ ++|+..++
T Consensus 79 ~~~~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~ 145 (276)
T 2wa2_A 79 GVELKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME 145 (276)
T ss_dssp SCCCCEEEEEESCTTCHHHHHHHTS----TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC
T ss_pred CCCCCCEEEEeccCCCHHHHHHHHc----CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC
Confidence 3578999999999999999999875 5799999998 543322110 000111168888 89988765
No 250
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.46 E-value=3.5e-07 Score=85.08 Aligned_cols=112 Identities=17% Similarity=0.098 Sum_probs=75.5
Q ss_pred HHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCC-CCCccccc
Q 021397 102 AVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGT-TFSLAPLR 180 (313)
Q Consensus 102 ~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~-~~d~v~~D 180 (313)
+...++..++.+|||+|||+|..+..+++..+ ..+++++|+ +.++. ++++++.++.++++++.+|+. .++
T Consensus 176 ~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~~~p----- 246 (348)
T 3lst_A 176 LARAGDFPATGTVADVGGGRGGFLLTVLREHP-GLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLREVP----- 246 (348)
T ss_dssp HHHHSCCCSSEEEEEETCTTSHHHHHHHHHCT-TEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTTCCC-----
T ss_pred HHHhCCccCCceEEEECCccCHHHHHHHHHCC-CCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCCCCC-----
Confidence 44556777889999999999999999999875 478999999 44444 444444556568999999985 222
Q ss_pred cccCcccccccccccccccccccccchhHHHHHHHHHHHHHhhhhhccccCcceeEeecCCcEEEEEcCC
Q 021397 181 LLLDPGSCNSVLQEKDDTFREWTSRIPWKERKRAVKARENAASKAIVRSEHPELIFYGRRSGIVGLTKEE 250 (313)
Q Consensus 181 ~~l~~~s~sg~l~~~p~~~~~w~~~~~~~~~~~~~q~~~l~~~~~~~r~~~~El~~~~k~gG~lvysTcs 250 (313)
.+|.+.+..+++..++. ...+++++..+++ ||||+|+..+..
T Consensus 247 -~~D~v~~~~vlh~~~d~----------------~~~~~L~~~~~~L-----------kpgG~l~i~e~~ 288 (348)
T 3lst_A 247 -HADVHVLKRILHNWGDE----------------DSVRILTNCRRVM-----------PAHGRVLVIDAV 288 (348)
T ss_dssp -CCSEEEEESCGGGSCHH----------------HHHHHHHHHHHTC-----------CTTCEEEEEECC
T ss_pred -CCcEEEEehhccCCCHH----------------HHHHHHHHHHHhc-----------CCCCEEEEEEec
Confidence 34444666666544331 0122334445555 459999887765
No 251
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.46 E-value=1.3e-07 Score=86.29 Aligned_cols=46 Identities=24% Similarity=0.242 Sum_probs=37.7
Q ss_pred hcCCC-CCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHH
Q 021397 105 ALNIS-AGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACR 152 (313)
Q Consensus 105 ~l~~~-~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~ 152 (313)
.+.+. +|.+|||+|||||++|..+++. +.++|+|+|+|+.|++.+.
T Consensus 79 ~~~~~~~g~~vLDiGcGTG~~t~~L~~~--ga~~V~aVDvs~~mL~~a~ 125 (291)
T 3hp7_A 79 VFNLSVEDMITIDIGASTGGFTDVMLQN--GAKLVYAVDVGTNQLVWKL 125 (291)
T ss_dssp HTTCCCTTCEEEEETCTTSHHHHHHHHT--TCSEEEEECSSSSCSCHHH
T ss_pred hcCCCccccEEEecCCCccHHHHHHHhC--CCCEEEEEECCHHHHHHHH
Confidence 33444 5789999999999999999885 3469999999999998743
No 252
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.45 E-value=2e-07 Score=86.19 Aligned_cols=64 Identities=9% Similarity=0.224 Sum_probs=52.7
Q ss_pred CCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHc--CC-CCcEEEEecCCCC
Q 021397 109 SAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKY--AL-GDRCRLFVADGTT 173 (313)
Q Consensus 109 ~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~--g~-~~~v~~~~~D~~~ 173 (313)
.++.+|||+|||+|+.+..+++..+ ..+|+++|+|+.+++.+++++... ++ ..+++++.+|+..
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~ 181 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKS-VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASK 181 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHH
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHH
Confidence 4568999999999999999987543 479999999999999999998662 23 2479999999743
No 253
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.45 E-value=2.5e-07 Score=80.10 Aligned_cols=70 Identities=10% Similarity=0.032 Sum_probs=52.9
Q ss_pred CCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccccccccCccccc
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLRLLLDPGSCN 189 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D~~l~~~s~s 189 (313)
++.+|||+|||+|..+..+++. +++|+|+.+++.++++ ++.++.+|+..++. .+..||.+.+.
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~--------~~~~~~~d~~~~~~--~~~~fD~v~~~ 109 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR--------GVFVLKGTAENLPL--KDESFDFALMV 109 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT--------TCEEEECBTTBCCS--CTTCEEEEEEE
T ss_pred CCCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc--------CCEEEEcccccCCC--CCCCeeEEEEc
Confidence 3889999999999999877632 9999999999998876 46788999877653 13345555666
Q ss_pred ccccccc
Q 021397 190 SVLQEKD 196 (313)
Q Consensus 190 g~l~~~p 196 (313)
.++.+.+
T Consensus 110 ~~l~~~~ 116 (219)
T 1vlm_A 110 TTICFVD 116 (219)
T ss_dssp SCGGGSS
T ss_pred chHhhcc
Confidence 6665544
No 254
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.44 E-value=3.9e-07 Score=82.68 Aligned_cols=65 Identities=9% Similarity=0.215 Sum_probs=53.0
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcC--C-CCcEEEEecCCCC
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYA--L-GDRCRLFVADGTT 173 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g--~-~~~v~~~~~D~~~ 173 (313)
..++.+|||+|||+|+.+..+++.. +..+|+++|+++.+++.+++++...+ + ..+++++.+|+..
T Consensus 76 ~~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~ 143 (283)
T 2i7c_A 76 SKEPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASK 143 (283)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHH
T ss_pred CCCCCeEEEEeCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHH
Confidence 3456899999999999999998753 34699999999999999999876542 1 2479999999854
No 255
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.43 E-value=2.1e-07 Score=85.77 Aligned_cols=64 Identities=19% Similarity=0.250 Sum_probs=53.2
Q ss_pred CCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHc--CC-CCcEEEEecCCCC
Q 021397 109 SAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKY--AL-GDRCRLFVADGTT 173 (313)
Q Consensus 109 ~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~--g~-~~~v~~~~~D~~~ 173 (313)
.++.+|||+|||+|+.+..+++..+ ..+|+++|+++.+++.+++++... ++ ..+++++.+|+..
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~ 173 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHES-VEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFE 173 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTT-CCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHH
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHH
Confidence 3457999999999999999987643 479999999999999999988654 33 3479999999854
No 256
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.41 E-value=8.9e-07 Score=76.42 Aligned_cols=72 Identities=17% Similarity=0.189 Sum_probs=57.4
Q ss_pred cHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCC--CCcEEEEecCCCC
Q 021397 96 DAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYAL--GDRCRLFVADGTT 173 (313)
Q Consensus 96 d~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~--~~~v~~~~~D~~~ 173 (313)
.....++... +++..+||++|| |+.|+.+|+. . .++|+++|.++++.+.+++++++.|+ .++|+++.+|+..
T Consensus 18 ~~~~~~L~~~--l~~a~~VLEiGt--GySTl~lA~~-~-~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~ 91 (202)
T 3cvo_A 18 PAEAEALRMA--YEEAEVILEYGS--GGSTVVAAEL-P-GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGP 91 (202)
T ss_dssp HHHHHHHHHH--HHHCSEEEEESC--SHHHHHHHTS-T-TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSS
T ss_pred HHHHHHHHHH--hhCCCEEEEECc--hHHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchh
Confidence 3344444333 246789999997 6888888874 3 58999999999999999999999998 7799999999643
No 257
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.40 E-value=1.4e-06 Score=88.63 Aligned_cols=92 Identities=17% Similarity=0.105 Sum_probs=70.4
Q ss_pred ccccccCCeEEEec------HHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhC-----------------------
Q 021397 83 TSMAYKQGKIYGID------AASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIG----------------------- 133 (313)
Q Consensus 83 ~~~~~~~G~~~~Qd------~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~----------------------- 133 (313)
..+.++.||-..+. .-+..++.+.+.+++..|||.|||+|+..+.+|....
T Consensus 157 g~~LhkRgyr~~~~~apl~e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~ 236 (703)
T 3v97_A 157 GDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAI 236 (703)
T ss_dssp SSCTTCCSSSCSSCCCSSCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHH
T ss_pred CCccccccccccCCCCCCcHHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHH
Confidence 34556666543332 1233344566778899999999999999998887641
Q ss_pred ------------------CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 134 ------------------DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 134 ------------------~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
....|+|+|+++.+++.+++|++++|+.+.+++.++|+..+
T Consensus 237 w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~ 295 (703)
T 3v97_A 237 WQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQL 295 (703)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGC
T ss_pred HHHHHHHHHHHhhhccccCCccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhC
Confidence 12579999999999999999999999987799999998654
No 258
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.40 E-value=2.3e-08 Score=88.69 Aligned_cols=130 Identities=12% Similarity=0.049 Sum_probs=76.5
Q ss_pred CCCCCEEEEECCCcChHHHHHHHH--hCC-CcEEEEEcC--CHHHHHHHHHHHHHcCCCCcEEEEec-CCCC-----CCc
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDI--IGD-SGSVTGVDV--ARHRLAACRTLLQKYALGDRCRLFVA-DGTT-----FSL 176 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~--~~~-~~~V~avD~--s~~~l~~~~~~~~~~g~~~~v~~~~~-D~~~-----~d~ 176 (313)
++||++|+|+|||||+|+..++++ ++. .|.|+|+|+ .+-.. ...|. +-+.+..+ |... +|.
T Consensus 71 ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~-------~~~Gv-~~i~~~~G~Df~~~~~~~~Dv 142 (269)
T 2px2_A 71 VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLM-------QSYGW-NIVTMKSGVDVFYKPSEISDT 142 (269)
T ss_dssp CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCC-------CSTTG-GGEEEECSCCGGGSCCCCCSE
T ss_pred CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcc-------cCCCc-eEEEeeccCCccCCCCCCCCE
Confidence 688999999999999999999987 432 467778773 22100 00222 12355556 7753 555
Q ss_pred cccc--cccC----cc--------cccccccccc-c-ccccccccchhHHH----HHHHHHHHHHhhhhhccccCcceeE
Q 021397 177 APLR--LLLD----PG--------SCNSVLQEKD-D-TFREWTSRIPWKER----KRAVKARENAASKAIVRSEHPELIF 236 (313)
Q Consensus 177 v~~D--~~l~----~~--------s~sg~l~~~p-~-~~~~w~~~~~~~~~----~~~~q~~~l~~~~~~~r~~~~El~~ 236 (313)
++.| |.-- |. .+.-.+.+.+ + +.|.|++....... .++.|...+. .+.++|++|+|+|+
T Consensus 143 VLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg~~~~~~~~l~~lk~~F~~vkv-k~paSR~~S~E~Yl 221 (269)
T 2px2_A 143 LLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILCPYMPKVIEKLESLQRRFGGGLV-RVPLSRNSNHEMYW 221 (269)
T ss_dssp EEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHHHHHHHHHHHHHCCEEE-CCTTSCTTCCCEEE
T ss_pred EEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECCCCchHHHHHHHHHHHHcCCEEE-ECCCCCCCCccEEE
Confidence 6666 3200 00 0112344455 3 56778753343322 2444444443 44599999999999
Q ss_pred eecCCcEEEE
Q 021397 237 YGRRSGIVGL 246 (313)
Q Consensus 237 ~~k~gG~lvy 246 (313)
+++..|-++-
T Consensus 222 Va~~~~n~~~ 231 (269)
T 2px2_A 222 VSGASGNIVH 231 (269)
T ss_dssp ETTCCSCHHH
T ss_pred EecccCcHHH
Confidence 9887665443
No 259
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.37 E-value=7.2e-07 Score=82.12 Aligned_cols=64 Identities=17% Similarity=0.241 Sum_probs=52.8
Q ss_pred CCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHc--C-C-CCcEEEEecCCCC
Q 021397 109 SAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKY--A-L-GDRCRLFVADGTT 173 (313)
Q Consensus 109 ~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~--g-~-~~~v~~~~~D~~~ 173 (313)
.++.+|||+|||+|+.+..+++..+ ..+|+++|+++.+++.+++++... + + ..+++++.+|+..
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~ 143 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPT-VEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARA 143 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTT-CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHH
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHH
Confidence 3568999999999999999988643 468999999999999999998752 2 2 2479999999854
No 260
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.37 E-value=2.7e-06 Score=79.49 Aligned_cols=115 Identities=13% Similarity=0.030 Sum_probs=77.5
Q ss_pred HHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCcccccc
Q 021397 102 AVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLRL 181 (313)
Q Consensus 102 ~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D~ 181 (313)
+...++..+..+|+|+|||+|..+..+++..++ .+++..|. +..++.+++++...+ .++|+++.+|+..-+..
T Consensus 171 ~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~-~~~~~~dl-p~v~~~a~~~~~~~~-~~rv~~~~gD~~~~~~~---- 243 (353)
T 4a6d_A 171 VLTAFDLSVFPLMCDLGGGAGALAKECMSLYPG-CKITVFDI-PEVVWTAKQHFSFQE-EEQIDFQEGDFFKDPLP---- 243 (353)
T ss_dssp HHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSS-CEEEEEEC-HHHHHHHHHHSCC---CCSEEEEESCTTTSCCC----
T ss_pred HHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCC-ceeEeccC-HHHHHHHHHhhhhcc-cCceeeecCccccCCCC----
Confidence 445556677889999999999999999999864 68888997 889999998876555 45899999998543322
Q ss_pred ccCcccccccccccccccccccccchhHHHHHHHHHHHHHhhhhhccccCcceeEeecCCcEEEEEcCC
Q 021397 182 LLDPGSCNSVLQEKDDTFREWTSRIPWKERKRAVKARENAASKAIVRSEHPELIFYGRRSGIVGLTKEE 250 (313)
Q Consensus 182 ~l~~~s~sg~l~~~p~~~~~w~~~~~~~~~~~~~q~~~l~~~~~~~r~~~~El~~~~k~gG~lvysTcs 250 (313)
..|.+.+..+++..++- . -.++|++..++++ |||+|+....-
T Consensus 244 ~~D~~~~~~vlh~~~d~-------~---------~~~iL~~~~~al~-----------pgg~lli~e~~ 285 (353)
T 4a6d_A 244 EADLYILARVLHDWADG-------K---------CSHLLERIYHTCK-----------PGGGILVIESL 285 (353)
T ss_dssp CCSEEEEESSGGGSCHH-------H---------HHHHHHHHHHHCC-----------TTCEEEEEECC
T ss_pred CceEEEeeeecccCCHH-------H---------HHHHHHHHHhhCC-----------CCCEEEEEEee
Confidence 22333455555443321 1 1233445555554 49988777665
No 261
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.36 E-value=2.2e-08 Score=90.02 Aligned_cols=131 Identities=11% Similarity=0.026 Sum_probs=76.6
Q ss_pred CCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEec--CC-----CCCCcccc
Q 021397 107 NISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVA--DG-----TTFSLAPL 179 (313)
Q Consensus 107 ~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~--D~-----~~~d~v~~ 179 (313)
-++++.+|||+|||||+|+..+++.++ ...|+++|+...+...... .+..+. ++..... |. ..+|.|+.
T Consensus 87 ~Lk~~~~VLDLGaAPGGWsQvAa~~~g-v~sV~GvdvG~d~~~~pi~-~~~~g~--~ii~~~~~~dv~~l~~~~~DvVLS 162 (282)
T 3gcz_A 87 YVKPTGIVVDLGCGRGGWSYYAASLKN-VKKVMAFTLGVQGHEKPIM-RTTLGW--NLIRFKDKTDVFNMEVIPGDTLLC 162 (282)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTSCCCCC-CCBTTG--GGEEEECSCCGGGSCCCCCSEEEE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHhcC-CCeeeeEEeccCccccccc-cccCCC--ceEEeeCCcchhhcCCCCcCEEEe
Confidence 367899999999999999999987654 3578999998653211110 001121 2333332 22 23555666
Q ss_pred ccccC------cc--------ccccccccc--cc-cccccc--ccchhHH--HHHHHHHHHHHhhhhhccccCcceeEee
Q 021397 180 RLLLD------PG--------SCNSVLQEK--DD-TFREWT--SRIPWKE--RKRAVKARENAASKAIVRSEHPELIFYG 238 (313)
Q Consensus 180 D~~l~------~~--------s~sg~l~~~--p~-~~~~w~--~~~~~~~--~~~~~q~~~l~~~~~~~r~~~~El~~~~ 238 (313)
|-... |. .+...+... .. +.|.|+ ......+ ..++.|..+...++ ++|++|.|+|+++
T Consensus 163 DmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~pyg~~~~~l~~~lk~~F~~V~~~KP-aSR~~S~E~Y~V~ 241 (282)
T 3gcz_A 163 DIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCPYTPLIMEELSRLQLKHGGGLVRVP-LSRNSTHEMYWVS 241 (282)
T ss_dssp CCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCCCSHHHHHHHHHHHHHHCCEEECCT-TSCTTCCCEEEET
T ss_pred cCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecCCCccHHHHHHHHHHhcCCEEEEcC-CCcccCcceeEEE
Confidence 62211 00 011123333 22 566776 3333322 23666666777889 9999999999998
Q ss_pred cCCc
Q 021397 239 RRSG 242 (313)
Q Consensus 239 k~gG 242 (313)
+..|
T Consensus 242 ~~r~ 245 (282)
T 3gcz_A 242 GTRT 245 (282)
T ss_dssp TCCC
T ss_pred ecCC
Confidence 8754
No 262
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.34 E-value=2.3e-07 Score=88.31 Aligned_cols=87 Identities=10% Similarity=0.000 Sum_probs=57.7
Q ss_pred HHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEE-EEecCCCCCCccccc
Q 021397 102 AVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCR-LFVADGTTFSLAPLR 180 (313)
Q Consensus 102 ~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~-~~~~D~~~~d~v~~D 180 (313)
+...+.+.++.+|||+|||+|..+..+++. ...|+|+|+|+.+++.++++ ++..... +...++..++ ..+
T Consensus 99 l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~---g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~--~~~ 169 (416)
T 4e2x_A 99 FLATELTGPDPFIVEIGCNDGIMLRTIQEA---GVRHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVR--RTE 169 (416)
T ss_dssp HHHTTTCSSSCEEEEETCTTTTTHHHHHHT---TCEEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHH--HHH
T ss_pred HHHHhCCCCCCEEEEecCCCCHHHHHHHHc---CCcEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhcc--cCC
Confidence 445566778999999999999999999875 35899999999999988865 4421110 1111221111 113
Q ss_pred cccCccccccccccccc
Q 021397 181 LLLDPGSCNSVLQEKDD 197 (313)
Q Consensus 181 ~~l~~~s~sg~l~~~p~ 197 (313)
..||.+.+..++.+.++
T Consensus 170 ~~fD~I~~~~vl~h~~d 186 (416)
T 4e2x_A 170 GPANVIYAANTLCHIPY 186 (416)
T ss_dssp CCEEEEEEESCGGGCTT
T ss_pred CCEEEEEECChHHhcCC
Confidence 44555677787776654
No 263
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.31 E-value=3.3e-07 Score=90.64 Aligned_cols=95 Identities=15% Similarity=0.052 Sum_probs=75.1
Q ss_pred cCCeEEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCC--------------CcEEEEEcCCHHHHHHHHH
Q 021397 88 KQGKIYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGD--------------SGSVTGVDVARHRLAACRT 153 (313)
Q Consensus 88 ~~G~~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~--------------~~~V~avD~s~~~l~~~~~ 153 (313)
..|.||--..-+.+++.++.++++ +|||.|||+|++...+++.+.. ...++|+|+++.+++.++.
T Consensus 223 ~~G~fyTP~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~ 301 (544)
T 3khk_A 223 QGGQYYTPKSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAM 301 (544)
T ss_dssp CSTTTCCCHHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHH
T ss_pred cCCeEeCCHHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHH
Confidence 457777777778888899998887 9999999999999888765421 3579999999999999999
Q ss_pred HHHHcCCCCcEEEEecCCC--------CCCcccccccc
Q 021397 154 LLQKYALGDRCRLFVADGT--------TFSLAPLRLLL 183 (313)
Q Consensus 154 ~~~~~g~~~~v~~~~~D~~--------~~d~v~~D~~l 183 (313)
|+..+|+..++.+.++|.. .||+|+.+|-|
T Consensus 302 Nl~l~gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf 339 (544)
T 3khk_A 302 NMVIRGIDFNFGKKNADSFLDDQHPDLRADFVMTNPPF 339 (544)
T ss_dssp HHHHTTCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCS
T ss_pred HHHHhCCCcccceeccchhcCcccccccccEEEECCCc
Confidence 9999998655555778853 35666677554
No 264
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.31 E-value=1.2e-06 Score=82.06 Aligned_cols=61 Identities=26% Similarity=0.475 Sum_probs=49.5
Q ss_pred CCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcC---CC----CcEEEEecCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYA---LG----DRCRLFVADGT 172 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g---~~----~~v~~~~~D~~ 172 (313)
.+.+|||+|+|.|+.+..+++. +. .+|+++|+++.+++.+++++...+ +. ++++++.+|+.
T Consensus 188 ~pkrVL~IGgG~G~~arellk~-~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~ 255 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKL-KP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCI 255 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT-CC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHH
T ss_pred CCCEEEEEECChhHHHHHHHHC-CC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHH
Confidence 4689999999999999988876 33 789999999999999999875332 22 26999999984
No 265
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.30 E-value=1.3e-06 Score=80.50 Aligned_cols=60 Identities=13% Similarity=0.095 Sum_probs=50.9
Q ss_pred CEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 021397 112 DHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT 173 (313)
Q Consensus 112 ~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~ 173 (313)
.+|||+|||.|+.+..+++..++ .+|+++|+++.+++.+++++.... ..+++++.+|+..
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~-~~v~~VEidp~vi~~Ar~~~~~~~-~~rv~v~~~Da~~ 150 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQ-SRNTVVELDAELARLSREWFDIPR-APRVKIRVDDARM 150 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTT-CEEEEEESCHHHHHHHHHHSCCCC-TTTEEEEESCHHH
T ss_pred CEEEEEECCcCHHHHHHHHHCCC-cEEEEEECCHHHHHHHHHhccccC-CCceEEEECcHHH
Confidence 49999999999999999997654 599999999999999998875432 2479999999854
No 266
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.26 E-value=1.3e-06 Score=79.58 Aligned_cols=54 Identities=17% Similarity=0.294 Sum_probs=43.4
Q ss_pred cCCCCCCEEEEECC------CcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEE-EecCCCCCC
Q 021397 106 LNISAGDHVLDLCA------APGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRL-FVADGTTFS 175 (313)
Q Consensus 106 l~~~~g~~VLDlca------gpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~-~~~D~~~~d 175 (313)
+.+++|++|||+|| |||+ ..+++.++..++|+|+|+|+. +. ++++ +++|+..++
T Consensus 59 l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v~-~v~~~i~gD~~~~~ 119 (290)
T 2xyq_A 59 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------VS-DADSTLIGDCATVH 119 (290)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------BC-SSSEEEESCGGGCC
T ss_pred cCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------CC-CCEEEEECccccCC
Confidence 46789999999999 7788 666777775689999999998 12 5778 999987644
No 267
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.24 E-value=1.1e-06 Score=83.42 Aligned_cols=57 Identities=16% Similarity=0.152 Sum_probs=45.9
Q ss_pred CCCEEEEECCC------cChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCc
Q 021397 110 AGDHVLDLCAA------PGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSL 176 (313)
Q Consensus 110 ~g~~VLDlcag------pG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~ 176 (313)
++.+|||+||| +|+.++.+++...+.++|+|+|+|+.|. .. ..+++++++|+..+++
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---------~~-~~rI~fv~GDa~dlpf 278 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---------VD-ELRIRTIQGDQNDAEF 278 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---------GC-BTTEEEEECCTTCHHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---------hc-CCCcEEEEecccccch
Confidence 56899999999 7888888887764458999999999973 12 2479999999987654
No 268
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.22 E-value=7.4e-06 Score=80.70 Aligned_cols=95 Identities=15% Similarity=0.143 Sum_probs=75.4
Q ss_pred cCCeEEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCC------------CcEEEEEcCCHHHHHHHHHHH
Q 021397 88 KQGKIYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGD------------SGSVTGVDVARHRLAACRTLL 155 (313)
Q Consensus 88 ~~G~~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~------------~~~V~avD~s~~~l~~~~~~~ 155 (313)
+.|.||-=..-+.+.+.++++++|++|+|-|||+|++...+.+.+.. ...++|+|+++.....++-|+
T Consensus 195 ~~GqfyTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl 274 (530)
T 3ufb_A 195 DSGEFYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNL 274 (530)
T ss_dssp SCCCCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHH
T ss_pred cCceECCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHH
Confidence 45766666667788899999999999999999999999888776532 246999999999999999999
Q ss_pred HHcCCCCcEEEEecCCC-----------CCCcccccccc
Q 021397 156 QKYALGDRCRLFVADGT-----------TFSLAPLRLLL 183 (313)
Q Consensus 156 ~~~g~~~~v~~~~~D~~-----------~~d~v~~D~~l 183 (313)
--+|.. ...+..+|.. .||+|+.+|-|
T Consensus 275 ~lhg~~-~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf 312 (530)
T 3ufb_A 275 LLHGLE-YPRIDPENSLRFPLREMGDKDRVDVILTNPPF 312 (530)
T ss_dssp HHHTCS-CCEEECSCTTCSCGGGCCGGGCBSEEEECCCS
T ss_pred HhcCCc-cccccccccccCchhhhcccccceEEEecCCC
Confidence 888885 4567777763 36666677554
No 269
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.21 E-value=1.1e-07 Score=85.35 Aligned_cols=131 Identities=11% Similarity=0.042 Sum_probs=75.1
Q ss_pred CCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCC-------CCCcccc
Q 021397 107 NISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGT-------TFSLAPL 179 (313)
Q Consensus 107 ~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~-------~~d~v~~ 179 (313)
.++++.+|||+|||||+++..+++..+ ...|+|+|+.......... .+..|. ++..+..++. .+|.++.
T Consensus 71 ~l~~~~~VLDLGaAPGGWSQvAa~~~~-~~~v~g~dVGvDl~~~pi~-~~~~g~--~ii~~~~~~dv~~l~~~~~DlVls 146 (277)
T 3evf_A 71 YVKLEGRVIDLGCGRGGWCYYAAAQKE-VSGVKGFTLGRDGHEKPMN-VQSLGW--NIITFKDKTDIHRLEPVKCDTLLC 146 (277)
T ss_dssp SSCCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTCCCCCC-CCBTTG--GGEEEECSCCTTTSCCCCCSEEEE
T ss_pred CCCCCCEEEEecCCCCHHHHHHHHhcC-CCcceeEEEeccCcccccc-cCcCCC--CeEEEeccceehhcCCCCccEEEe
Confidence 367889999999999999999887643 3568888887432100000 001121 3444555432 3445555
Q ss_pred ccccCcccc----------------ccccccc-cc-cccccc--ccchhHH--HHHHHHHHHHHhhhhhccccCcceeEe
Q 021397 180 RLLLDPGSC----------------NSVLQEK-DD-TFREWT--SRIPWKE--RKRAVKARENAASKAIVRSEHPELIFY 237 (313)
Q Consensus 180 D~~l~~~s~----------------sg~l~~~-p~-~~~~w~--~~~~~~~--~~~~~q~~~l~~~~~~~r~~~~El~~~ 237 (313)
|-... ++ ...+... .. +.|.|+ ......+ ..++.|..+...+| ++|++|.|+|++
T Consensus 147 D~apn--sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~pyg~~~~~l~~~lk~~F~~V~~~KP-aSR~~S~E~Y~V 223 (277)
T 3evf_A 147 DIGES--SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAPYMPDVLEKLELLQRRFGGTVIRNP-LSRNSTHEMYYV 223 (277)
T ss_dssp CCCCC--CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHHHHHHHHHHHHHCCEEECCT-TSCTTCCCEEEE
T ss_pred cCccC--cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCccHHHHHHHHHHhcCCEEEEeC-CCCCCCCceEEE
Confidence 52111 11 1122222 22 456666 3322222 23666666777889 999999999999
Q ss_pred ecCCcEE
Q 021397 238 GRRSGIV 244 (313)
Q Consensus 238 ~k~gG~l 244 (313)
++..|-+
T Consensus 224 ~~~r~n~ 230 (277)
T 3evf_A 224 SGARSNV 230 (277)
T ss_dssp SSCCCCH
T ss_pred EecCCCc
Confidence 8876543
No 270
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.20 E-value=1.6e-06 Score=74.40 Aligned_cols=68 Identities=21% Similarity=0.044 Sum_probs=47.9
Q ss_pred HHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccccc
Q 021397 101 AAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLR 180 (313)
Q Consensus 101 ~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D 180 (313)
++..+....++.+|||+|||+|..+..++ ..|+++|+|+. ++.++.+|+..++. .+
T Consensus 58 ~~~~l~~~~~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~----------------~~~~~~~d~~~~~~--~~ 113 (215)
T 2zfu_A 58 IARDLRQRPASLVVADFGCGDCRLASSIR------NPVHCFDLASL----------------DPRVTVCDMAQVPL--ED 113 (215)
T ss_dssp HHHHHHTSCTTSCEEEETCTTCHHHHHCC------SCEEEEESSCS----------------STTEEESCTTSCSC--CT
T ss_pred HHHHHhccCCCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC----------------CceEEEeccccCCC--CC
Confidence 33334445678899999999999987763 57999999987 24578888877543 13
Q ss_pred cccCcccccccc
Q 021397 181 LLLDPGSCNSVL 192 (313)
Q Consensus 181 ~~l~~~s~sg~l 192 (313)
..||.+.+..++
T Consensus 114 ~~fD~v~~~~~l 125 (215)
T 2zfu_A 114 ESVDVAVFCLSL 125 (215)
T ss_dssp TCEEEEEEESCC
T ss_pred CCEeEEEEehhc
Confidence 345555666655
No 271
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.18 E-value=6.6e-06 Score=77.19 Aligned_cols=57 Identities=14% Similarity=0.156 Sum_probs=47.6
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT 173 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~ 173 (313)
..++.+|||+|||+|..+..+++..++ .+++++|+ +.+++.++++ .+++++.+|+..
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~ 257 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPS-INAINFDL-PHVIQDAPAF-------SGVEHLGGDMFD 257 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCC-CEEEEEeh-HHHHHhhhhc-------CCCEEEecCCCC
Confidence 556789999999999999999998754 78999999 8888766532 379999999864
No 272
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.17 E-value=5e-06 Score=77.93 Aligned_cols=79 Identities=13% Similarity=0.069 Sum_probs=57.9
Q ss_pred HhcC-CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccccccc
Q 021397 104 SALN-ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLRLL 182 (313)
Q Consensus 104 ~~l~-~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D~~ 182 (313)
..++ ..++.+|||+|||+|..+..+++..+ ..+++++|+ +.+++.+++ .. +++++.+|+.. +...
T Consensus 202 ~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~------~~-~v~~~~~d~~~-~~~~---- 267 (372)
T 1fp1_D 202 EIYTGFEGISTLVDVGGGSGRNLELIISKYP-LIKGINFDL-PQVIENAPP------LS-GIEHVGGDMFA-SVPQ---- 267 (372)
T ss_dssp HHCCTTTTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC------CT-TEEEEECCTTT-CCCC----
T ss_pred HHhhccCCCCEEEEeCCCCcHHHHHHHHHCC-CCeEEEeCh-HHHHHhhhh------cC-CCEEEeCCccc-CCCC----
Confidence 3444 56788999999999999999999875 478999999 888877664 22 69999999865 3211
Q ss_pred cCcccccccccccc
Q 021397 183 LDPGSCNSVLQEKD 196 (313)
Q Consensus 183 l~~~s~sg~l~~~p 196 (313)
+|.+.+..++++.+
T Consensus 268 ~D~v~~~~~lh~~~ 281 (372)
T 1fp1_D 268 GDAMILKAVCHNWS 281 (372)
T ss_dssp EEEEEEESSGGGSC
T ss_pred CCEEEEecccccCC
Confidence 34446666665443
No 273
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.15 E-value=6.5e-06 Score=81.28 Aligned_cols=96 Identities=14% Similarity=0.060 Sum_probs=76.1
Q ss_pred cCCeEEEecHHHHHHHHhcC----CCCCCEEEEECCCcChHHHHHHHHhC--CCcEEEEEcCCHHHHHHHHHHHHHcCCC
Q 021397 88 KQGKIYGIDAASGAAVSALN----ISAGDHVLDLCAAPGAKLCMILDIIG--DSGSVTGVDVARHRLAACRTLLQKYALG 161 (313)
Q Consensus 88 ~~G~~~~Qd~ss~~~~~~l~----~~~g~~VLDlcagpG~kt~~la~~~~--~~~~V~avD~s~~~l~~~~~~~~~~g~~ 161 (313)
..|.||-=..-+.+++.++. ++++.+|+|.|||+|++...+++.+. +...++|+|+++.++..++.|+..+|+.
T Consensus 195 ~~G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~ 274 (542)
T 3lkd_A 195 KAGEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVP 274 (542)
T ss_dssp CCSSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCC
T ss_pred cCCeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCC
Confidence 45666666666777777776 67889999999999999999998863 2468999999999999999999999984
Q ss_pred -CcEEEEecCCCC----------CCcccccccc
Q 021397 162 -DRCRLFVADGTT----------FSLAPLRLLL 183 (313)
Q Consensus 162 -~~v~~~~~D~~~----------~d~v~~D~~l 183 (313)
+++.+.++|... ||+|+.+|-|
T Consensus 275 ~~~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf 307 (542)
T 3lkd_A 275 IENQFLHNADTLDEDWPTQEPTNFDGVLMNPPY 307 (542)
T ss_dssp GGGEEEEESCTTTSCSCCSSCCCBSEEEECCCT
T ss_pred cCccceEecceecccccccccccccEEEecCCc
Confidence 368899998642 4556666544
No 274
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.15 E-value=1.9e-06 Score=77.81 Aligned_cols=65 Identities=18% Similarity=0.218 Sum_probs=56.2
Q ss_pred HHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 021397 101 AAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT 173 (313)
Q Consensus 101 ~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~ 173 (313)
-+...|++++|+.++|++||.||.|..|++. .++|+|+|.++.+++.+++ ++. ++++++++|...
T Consensus 13 e~le~L~~~~gg~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~-L~~----~rv~lv~~~f~~ 77 (285)
T 1wg8_A 13 EALDLLAVRPGGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKG-LHL----PGLTVVQGNFRH 77 (285)
T ss_dssp HHHHHHTCCTTCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHH-TCC----TTEEEEESCGGG
T ss_pred HHHHhhCCCCCCEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHh-hcc----CCEEEEECCcch
Confidence 3566788999999999999999999999997 4799999999999999987 543 379999998854
No 275
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.13 E-value=9e-06 Score=76.18 Aligned_cols=61 Identities=11% Similarity=0.078 Sum_probs=49.6
Q ss_pred HhcC-CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 021397 104 SALN-ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT 173 (313)
Q Consensus 104 ~~l~-~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~ 173 (313)
..++ ..++.+|||+|||+|..+..+++..++ .+++++|+ +.+++.+++. .+++++.+|+..
T Consensus 194 ~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~~-------~~v~~~~~D~~~ 255 (364)
T 3p9c_A 194 ELYHGFEGLGTLVDVGGGVGATVAAIAAHYPT-IKGVNFDL-PHVISEAPQF-------PGVTHVGGDMFK 255 (364)
T ss_dssp HHCCTTTTCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT
T ss_pred HhcccccCCCEEEEeCCCCCHHHHHHHHHCCC-CeEEEecC-HHHHHhhhhc-------CCeEEEeCCcCC
Confidence 3444 667889999999999999999998764 68999999 8887766531 379999999865
No 276
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.12 E-value=2.2e-06 Score=76.95 Aligned_cols=63 Identities=6% Similarity=-0.099 Sum_probs=51.2
Q ss_pred CCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHc--CC-CCcEEEEecCCCCC
Q 021397 109 SAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKY--AL-GDRCRLFVADGTTF 174 (313)
Q Consensus 109 ~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~--g~-~~~v~~~~~D~~~~ 174 (313)
..+.+|||+|||+|+.+..+++. + .+|+++|+++.+++.+++++... ++ ..+++++.+|+..+
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~--~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~ 136 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D--THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLD 136 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S--CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSC
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C--CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHH
Confidence 34579999999999999998876 4 79999999999999999876431 11 24799999999764
No 277
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.07 E-value=3.6e-06 Score=77.72 Aligned_cols=66 Identities=21% Similarity=0.326 Sum_probs=56.8
Q ss_pred HHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 021397 102 AVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGT 172 (313)
Q Consensus 102 ~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~ 172 (313)
++..|.++||+.++|+++|.||.|..+++.+++.|+|+|+|.++.+++.++ ++ . .+++++++++..
T Consensus 49 vl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL---~-~~Rv~lv~~nF~ 114 (347)
T 3tka_A 49 AVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI---D-DPRFSIIHGPFS 114 (347)
T ss_dssp HHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC---C-CTTEEEEESCGG
T ss_pred HHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh---c-CCcEEEEeCCHH
Confidence 567788999999999999999999999999887899999999999999884 33 2 357889988764
No 278
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.05 E-value=4.1e-07 Score=82.31 Aligned_cols=128 Identities=12% Similarity=0.011 Sum_probs=72.9
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEec--CC-----CCCCccccc
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVA--DG-----TTFSLAPLR 180 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~--D~-----~~~d~v~~D 180 (313)
.++|.+|||+|||||+|+..+++..+ ...|+|+|+.......... .+..+. ++..... |. ..+|.++.|
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~g-v~sV~Gvdlg~~~~~~P~~-~~~~~~--~iv~~~~~~di~~l~~~~~DlVlsD 154 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQKE-VMSVKGYTLGIEGHEKPIH-MQTLGW--NIVKFKDKSNVFTMPTEPSDTLLCD 154 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTSCCCCC-CCBTTG--GGEEEECSCCTTTSCCCCCSEEEEC
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhcC-CceeeeEEecccccccccc-ccccCC--ceEEeecCceeeecCCCCcCEEeec
Confidence 45899999999999999999998654 3578999997532110000 000111 2222221 22 234555555
Q ss_pred cccCcccccc------------------ccccc-cc-cccccc--ccchhHH--HHHHHHHHHHHhhhhhccccCcceeE
Q 021397 181 LLLDPGSCNS------------------VLQEK-DD-TFREWT--SRIPWKE--RKRAVKARENAASKAIVRSEHPELIF 236 (313)
Q Consensus 181 ~~l~~~s~sg------------------~l~~~-p~-~~~~w~--~~~~~~~--~~~~~q~~~l~~~~~~~r~~~~El~~ 236 (313)
-+. . +| .+... .. +.|.|+ ......+ ..++.|..+...+| ++|++|.|+|+
T Consensus 155 ~AP---n-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~yG~~~~~ll~~lk~~F~~V~~~KP-aSR~~S~E~Y~ 229 (300)
T 3eld_A 155 IGE---S-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPYHPDVIEKLERLQLRFGGGIVRVP-FSRNSTHEMYY 229 (300)
T ss_dssp CCC---C-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTTSHHHHHHHHHHHHHHCCEEECCT-TSCTTCCCEEE
T ss_pred CcC---C-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccccCccHHHHHHHHHHhCCcEEEEeC-CCCCCChHHee
Confidence 110 1 22 22333 22 455565 3332222 23566666777888 99999999999
Q ss_pred eecCCcEE
Q 021397 237 YGRRSGIV 244 (313)
Q Consensus 237 ~~k~gG~l 244 (313)
||...|-+
T Consensus 230 V~~~r~n~ 237 (300)
T 3eld_A 230 ISGARNNI 237 (300)
T ss_dssp ESSCCCCH
T ss_pred eccCCCCc
Confidence 98875433
No 279
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.04 E-value=1.2e-05 Score=74.81 Aligned_cols=75 Identities=12% Similarity=0.056 Sum_probs=56.0
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccccccccCccc
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLRLLLDPGS 187 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D~~l~~~s 187 (313)
..++.+|||+|||+|..+..+++..++ .+++++|+ +.+++.+++ .. +++++.+|+.. +.. .+|.+.
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~------~~-~v~~~~~d~~~-~~p----~~D~v~ 251 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPK-LKCIVFDR-PQVVENLSG------SN-NLTYVGGDMFT-SIP----NADAVL 251 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEEC-HHHHTTCCC------BT-TEEEEECCTTT-CCC----CCSEEE
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCC-CeEEEeeC-HHHHhhccc------CC-CcEEEeccccC-CCC----CccEEE
Confidence 456789999999999999999998754 68999999 999887764 22 59999999854 221 244446
Q ss_pred ccccccccc
Q 021397 188 CNSVLQEKD 196 (313)
Q Consensus 188 ~sg~l~~~p 196 (313)
+..++++.+
T Consensus 252 ~~~~lh~~~ 260 (352)
T 1fp2_A 252 LKYILHNWT 260 (352)
T ss_dssp EESCGGGSC
T ss_pred eehhhccCC
Confidence 666665443
No 280
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.04 E-value=1.5e-05 Score=70.47 Aligned_cols=59 Identities=14% Similarity=0.065 Sum_probs=51.7
Q ss_pred CCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 021397 109 SAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT 173 (313)
Q Consensus 109 ~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~ 173 (313)
.+..+|||+|||.|-.+..+. +...++|+|+++.+++.+++++.+.|. +..+...|...
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~----~~~~y~a~DId~~~i~~ar~~~~~~g~--~~~~~v~D~~~ 162 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER----GIASVWGCDIHQGLGDVITPFAREKDW--DFTFALQDVLC 162 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT----TCSEEEEEESBHHHHHHHHHHHHHTTC--EEEEEECCTTT
T ss_pred CCCCeEEEecCCccHHHHHhc----cCCeEEEEeCCHHHHHHHHHHHHhcCC--CceEEEeeccc
Confidence 457899999999999998776 357999999999999999999999986 68888888754
No 281
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.96 E-value=4.5e-06 Score=73.08 Aligned_cols=130 Identities=12% Similarity=0.101 Sum_probs=80.0
Q ss_pred CCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEec-CCC-----CCCccccc
Q 021397 107 NISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVA-DGT-----TFSLAPLR 180 (313)
Q Consensus 107 ~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~-D~~-----~~d~v~~D 180 (313)
.+++++.|+|+|||||+++..++...+. ..|+|+|+-..--+. -...+.+|.. .|++..+ |.. .+|.++.|
T Consensus 75 ~l~~g~~VvDLGaapGGWSq~~a~~~g~-~~V~avdvG~~ghe~-P~~~~s~gwn-~v~fk~gvDv~~~~~~~~DtllcD 151 (267)
T 3p8z_A 75 MVIPEGRVIDLGCGRGGWSYYCAGLKKV-TEVRGYTKGGPGHEE-PVPMSTYGWN-IVKLMSGKDVFYLPPEKCDTLLCD 151 (267)
T ss_dssp SSCCCEEEEEESCTTSHHHHHHHTSTTE-EEEEEECCCSTTSCC-CCCCCCTTTT-SEEEECSCCGGGCCCCCCSEEEEC
T ss_pred CCCCCCEEEEcCCCCCcHHHHHHHhcCC-CEEEEEecCCCCccC-cchhhhcCcC-ceEEEeccceeecCCccccEEEEe
Confidence 4679999999999999999999887653 489999986542210 0012456664 6899988 853 24445555
Q ss_pred --cccCcccccc------cc----------cccccccccccccchhH-HHHHHHHHH---HHHhhhhhccccCcceeEee
Q 021397 181 --LLLDPGSCNS------VL----------QEKDDTFREWTSRIPWK-ERKRAVKAR---ENAASKAIVRSEHPELIFYG 238 (313)
Q Consensus 181 --~~l~~~s~sg------~l----------~~~p~~~~~w~~~~~~~-~~~~~~q~~---~l~~~~~~~r~~~~El~~~~ 238 (313)
|. +++- ++ .+..-.+|.+++..... .....+|.+ .+.+.+. +|.+++|||++.
T Consensus 152 IgeS----s~~~~vE~~RtlrvLela~~wL~~~~fc~KVl~py~p~v~e~l~~lq~~fgg~lVR~P~-SRnsThEMY~Vs 226 (267)
T 3p8z_A 152 IGES----SPSPTVEESRTIRVLKMVEPWLKNNQFCIKVLNPYMPTVIEHLERLQRKHGGMLVRNPL-SRNSTHEMYWIS 226 (267)
T ss_dssp CCCC----CSCHHHHHHHHHHHHHHHGGGCSSCEEEEEESCCCSHHHHHHHHHHHHHHCCEEECCTT-SCTTCCCEEEES
T ss_pred cCCC----CCChhhhhhHHHHHHHHHHHhcccCCEEEEEccCCChhHHHHHHHHHHHhCCEeEeCCC-CCCCcceEEEEe
Confidence 22 1111 11 11111345566665444 233444433 4556676 899999999996
Q ss_pred cCCcEE
Q 021397 239 RRSGIV 244 (313)
Q Consensus 239 k~gG~l 244 (313)
...|-+
T Consensus 227 g~~~ni 232 (267)
T 3p8z_A 227 NGTGNI 232 (267)
T ss_dssp SCCCCH
T ss_pred cCCCce
Confidence 655544
No 282
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.93 E-value=6.1e-06 Score=77.27 Aligned_cols=57 Identities=23% Similarity=0.262 Sum_probs=43.6
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d 175 (313)
+++|++|||+||+|||+|..++++ ++.|+|||+.+- ...+. .. .+|+++.+|+..+.
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r---g~~V~aVD~~~l-----~~~l~--~~-~~V~~~~~d~~~~~ 265 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR---NMWVYSVDNGPM-----AQSLM--DT-GQVTWLREDGFKFR 265 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT---TCEEEEECSSCC-----CHHHH--TT-TCEEEECSCTTTCC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC---CCEEEEEEhhhc-----Chhhc--cC-CCeEEEeCcccccc
Confidence 578999999999999999999885 479999998641 11121 12 37999999986654
No 283
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.86 E-value=1.2e-05 Score=72.49 Aligned_cols=134 Identities=19% Similarity=0.160 Sum_probs=75.1
Q ss_pred CCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEec-CCCCCCcccccccc-C
Q 021397 107 NISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVA-DGTTFSLAPLRLLL-D 184 (313)
Q Consensus 107 ~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~-D~~~~d~v~~D~~l-~ 184 (313)
.+++++.|||+||||||++..++...+. ..|+|+|+-..--+. -..++.++.. .|.++.+ |+..+....+|-.+ |
T Consensus 91 ~l~~~~~VlDLGaapGGwsq~~~~~~gv-~~V~avdvG~~~he~-P~~~~ql~w~-lV~~~~~~Dv~~l~~~~~D~ivcD 167 (321)
T 3lkz_A 91 FLEPVGKVIDLGCGRGGWCYYMATQKRV-QEVRGYTKGGPGHEE-PQLVQSYGWN-IVTMKSGVDVFYRPSECCDTLLCD 167 (321)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHTTCTTE-EEEEEECCCSTTSCC-CCCCCBTTGG-GEEEECSCCTTSSCCCCCSEEEEC
T ss_pred CCCCCCEEEEeCCCCCcHHHHHHhhcCC-CEEEEEEcCCCCccC-cchhhhcCCc-ceEEEeccCHhhCCCCCCCEEEEE
Confidence 4678999999999999999988877553 479999997651100 0001233432 3677766 76443322233111 1
Q ss_pred cccccc--------c----------cccccc--ccccccccchhH-HHHHHHHHH---HHHhhhhhccccCcceeEeecC
Q 021397 185 PGSCNS--------V----------LQEKDD--TFREWTSRIPWK-ERKRAVKAR---ENAASKAIVRSEHPELIFYGRR 240 (313)
Q Consensus 185 ~~s~sg--------~----------l~~~p~--~~~~w~~~~~~~-~~~~~~q~~---~l~~~~~~~r~~~~El~~~~k~ 240 (313)
..-.++ + +.++|. .+|.+.+=.... .....+|.+ .+.+.+. +|.++.|||++...
T Consensus 168 igeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY~~~v~e~l~~lq~~fgg~lvr~P~-SRnst~EmY~vsGa 246 (321)
T 3lkz_A 168 IGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPYMPKVIEKMELLQRRYGGGLVRNPL-SRNSTHEMYWVSRA 246 (321)
T ss_dssp CCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTSHHHHHHHHHHHHHHCCEEECCTT-SCTTCCCEEEETTC
T ss_pred CccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCCChHHHHHHHHHHHHhCCEeEeCCC-CCCCcceEEEEecC
Confidence 111111 1 122322 345555533333 223344443 4556666 89999999999665
Q ss_pred CcEE
Q 021397 241 SGIV 244 (313)
Q Consensus 241 gG~l 244 (313)
.|-|
T Consensus 247 ~gNI 250 (321)
T 3lkz_A 247 SGNV 250 (321)
T ss_dssp CSCH
T ss_pred CCCe
Confidence 5544
No 284
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=97.85 E-value=8.2e-06 Score=72.97 Aligned_cols=61 Identities=13% Similarity=0.079 Sum_probs=52.3
Q ss_pred CCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 021397 109 SAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGT 172 (313)
Q Consensus 109 ~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~ 172 (313)
.+..+|||+|||.|-.+..++... +...++|+|+++.+++.+++|+.++|+. ..+...|..
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~-p~a~y~a~DId~~~le~a~~~l~~~g~~--~~~~v~D~~ 191 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLP-AETVYIASDIDARLVGFVDEALTRLNVP--HRTNVADLL 191 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCC-TTCEEEEEESBHHHHHHHHHHHHHTTCC--EEEEECCTT
T ss_pred CCCceeeeeccCccHHHHHHHhhC-CCCEEEEEeCCHHHHHHHHHHHHhcCCC--ceEEEeeec
Confidence 346799999999999999888754 3579999999999999999999999984 678887764
No 285
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=97.84 E-value=2.9e-05 Score=72.23 Aligned_cols=75 Identities=15% Similarity=0.083 Sum_probs=55.1
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccccccccCccc
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAPLRLLLDPGS 187 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~~D~~l~~~s 187 (313)
..++.+|||+|||+|..+..+++..+ ..+++++|+ +.+++.+++ .. +++++.+|+.. +.. .+|.+.
T Consensus 191 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~~-~v~~~~~d~~~-~~~----~~D~v~ 256 (358)
T 1zg3_A 191 FEGLESLVDVGGGTGGVTKLIHEIFP-HLKCTVFDQ-PQVVGNLTG------NE-NLNFVGGDMFK-SIP----SADAVL 256 (358)
T ss_dssp HHTCSEEEEETCTTSHHHHHHHHHCT-TSEEEEEEC-HHHHSSCCC------CS-SEEEEECCTTT-CCC----CCSEEE
T ss_pred ccCCCEEEEECCCcCHHHHHHHHHCC-CCeEEEecc-HHHHhhccc------CC-CcEEEeCccCC-CCC----CceEEE
Confidence 34678999999999999999999875 368999999 788876653 23 59999999865 322 244446
Q ss_pred ccccccccc
Q 021397 188 CNSVLQEKD 196 (313)
Q Consensus 188 ~sg~l~~~p 196 (313)
+..+++..+
T Consensus 257 ~~~vlh~~~ 265 (358)
T 1zg3_A 257 LKWVLHDWN 265 (358)
T ss_dssp EESCGGGSC
T ss_pred EcccccCCC
Confidence 666665433
No 286
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.76 E-value=5.7e-05 Score=77.09 Aligned_cols=94 Identities=13% Similarity=0.029 Sum_probs=62.3
Q ss_pred CCeEEEecHHHHHHHHh----cC--CCCCCEEEEECCCcChHHHHHHHHhCC--CcEEEEEcCCHHHHHHH--HHHHHH-
Q 021397 89 QGKIYGIDAASGAAVSA----LN--ISAGDHVLDLCAAPGAKLCMILDIIGD--SGSVTGVDVARHRLAAC--RTLLQK- 157 (313)
Q Consensus 89 ~G~~~~Qd~ss~~~~~~----l~--~~~g~~VLDlcagpG~kt~~la~~~~~--~~~V~avD~s~~~l~~~--~~~~~~- 157 (313)
.|.|+--..-+.+++.+ +. ..++.+|||.|||+|+....+++.++. ...++|+|+++.+++.+ +.|+..
T Consensus 294 ~GqFYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN 373 (878)
T 3s1s_A 294 EGVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFP 373 (878)
T ss_dssp CBSSSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTST
T ss_pred CceEcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHh
Confidence 35555544545555554 33 246889999999999999999987642 35799999999999999 555544
Q ss_pred ---cCCCCcEEEEecCCC--------CCCcccccccc
Q 021397 158 ---YALGDRCRLFVADGT--------TFSLAPLRLLL 183 (313)
Q Consensus 158 ---~g~~~~v~~~~~D~~--------~~d~v~~D~~l 183 (313)
.|.. ...+...|.. .||.+..||-|
T Consensus 374 ~LlhGi~-~~~I~~dD~L~~~~~~~~kFDVVIgNPPY 409 (878)
T 3s1s_A 374 QLVSSNN-APTITGEDVCSLNPEDFANVSVVVMNPPY 409 (878)
T ss_dssp TTCBTTB-CCEEECCCGGGCCGGGGTTEEEEEECCBC
T ss_pred hhhcCCC-cceEEecchhcccccccCCCCEEEECCCc
Confidence 3332 2345555543 35566666543
No 287
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.75 E-value=0.00012 Score=73.17 Aligned_cols=65 Identities=11% Similarity=-0.013 Sum_probs=52.2
Q ss_pred CCEEEEECCCcChH---HHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCc
Q 021397 111 GDHVLDLCAAPGAK---LCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSL 176 (313)
Q Consensus 111 g~~VLDlcagpG~k---t~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~ 176 (313)
+..|||+|||+|-. ++.+++..+...+|+|||.|+ +...+++..+.+|+.++|+++.+|++.++.
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~L 425 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWVA 425 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCCC
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceeccC
Confidence 34799999999988 555555544334799999997 566788888999999999999999998754
No 288
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=97.70 E-value=1.3e-05 Score=66.50 Aligned_cols=69 Identities=16% Similarity=0.103 Sum_probs=49.9
Q ss_pred hcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCccc-ccccc
Q 021397 105 ALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSLAP-LRLLL 183 (313)
Q Consensus 105 ~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~v~-~D~~l 183 (313)
-+++++|++|||+|||. +++|+|+.|++.+++++. .+++++++|+..++... .+..|
T Consensus 7 ~~g~~~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~-----~~~~~~~~d~~~~~~~~~~~~~f 64 (176)
T 2ld4_A 7 DFGISAGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTG-----NEGRVSVENIKQLLQSAHKESSF 64 (176)
T ss_dssp TTTCCTTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTT-----TTSEEEEEEGGGGGGGCCCSSCE
T ss_pred ccCCCCCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhcc-----cCcEEEEechhcCccccCCCCCE
Confidence 34678999999999985 239999999999997642 14789999998765421 23456
Q ss_pred Cccccccccccc
Q 021397 184 DPGSCNSVLQEK 195 (313)
Q Consensus 184 ~~~s~sg~l~~~ 195 (313)
|.+.|..++++.
T Consensus 65 D~V~~~~~l~~~ 76 (176)
T 2ld4_A 65 DIILSGLVPGST 76 (176)
T ss_dssp EEEEECCSTTCC
T ss_pred eEEEECChhhhc
Confidence 666776666544
No 289
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.52 E-value=0.00027 Score=64.16 Aligned_cols=49 Identities=22% Similarity=0.264 Sum_probs=42.8
Q ss_pred CCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q 021397 109 SAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYAL 160 (313)
Q Consensus 109 ~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~ 160 (313)
.+|+.|||.+||+|..+..+++. + ..++|+|+++.+++.+++++++...
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~-g--~~~~g~e~~~~~~~~a~~r~~~~~~ 282 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARW-G--RRALGVELVPRYAQLAKERFAREVP 282 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT-T--CEEEEEESCHHHHHHHHHHHHHHST
T ss_pred CCCCEEEECCCCCCHHHHHHHHc-C--CeEEEEeCCHHHHHHHHHHHHHhcc
Confidence 68999999999999998887764 3 5899999999999999999988643
No 290
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.51 E-value=0.00029 Score=63.69 Aligned_cols=63 Identities=13% Similarity=0.109 Sum_probs=52.1
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC----CCcEEEEEcCCH--------------------------HHHHHHHHHHHHcC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG----DSGSVTGVDVAR--------------------------HRLAACRTLLQKYA 159 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~----~~~~V~avD~s~--------------------------~~l~~~~~~~~~~g 159 (313)
....||++|++.|+.++.+++.+. ..++|+++|..+ .+++.++++++++|
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 345999999999999999998764 257899999642 15788999999999
Q ss_pred CC-CcEEEEecCCC
Q 021397 160 LG-DRCRLFVADGT 172 (313)
Q Consensus 160 ~~-~~v~~~~~D~~ 172 (313)
+. ++|+++.+|+.
T Consensus 186 l~~~~I~li~Gda~ 199 (282)
T 2wk1_A 186 LLDEQVRFLPGWFK 199 (282)
T ss_dssp CCSTTEEEEESCHH
T ss_pred CCcCceEEEEeCHH
Confidence 83 78999999984
No 291
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.38 E-value=0.0003 Score=70.73 Aligned_cols=65 Identities=9% Similarity=-0.051 Sum_probs=49.0
Q ss_pred CCEEEEECCCcChHHHHH---HHHhC---------CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCc
Q 021397 111 GDHVLDLCAAPGAKLCMI---LDIIG---------DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFSL 176 (313)
Q Consensus 111 g~~VLDlcagpG~kt~~l---a~~~~---------~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d~ 176 (313)
+..|||+|||+|-.+... ++..+ ...+|+|||.|+.....++.... .|+.++|+++.+|++.+..
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~l 486 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPG 486 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccc
Confidence 357999999999997533 32222 23499999999988776665544 7888789999999987654
No 292
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.37 E-value=0.0004 Score=64.76 Aligned_cols=81 Identities=12% Similarity=0.114 Sum_probs=62.0
Q ss_pred CeEEEecHH-HHHHHHhcCCCC------CCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCC
Q 021397 90 GKIYGIDAA-SGAAVSALNISA------GDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGD 162 (313)
Q Consensus 90 G~~~~Qd~s-s~~~~~~l~~~~------g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~ 162 (313)
|.-++.|+. ...++..+++++ ++.|||+|.|+|..|..|++.... .+|+|+|+++..+..+++.+ . . +
T Consensus 31 GQnFL~d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~-~~vvavE~D~~l~~~L~~~~-~--~-~ 105 (353)
T 1i4w_A 31 GFKYLWNPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCP-RQYSLLEKRSSLYKFLNAKF-E--G-S 105 (353)
T ss_dssp GCCCBCCHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCC-SEEEEECCCHHHHHHHHHHT-T--T-S
T ss_pred CcCccCCHHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCC-CEEEEEecCHHHHHHHHHhc-c--C-C
Confidence 443444544 344667777764 589999999999999999987532 58999999999999998776 2 2 4
Q ss_pred cEEEEecCCCCCC
Q 021397 163 RCRLFVADGTTFS 175 (313)
Q Consensus 163 ~v~~~~~D~~~~d 175 (313)
+++++.+|+..++
T Consensus 106 ~l~ii~~D~l~~~ 118 (353)
T 1i4w_A 106 PLQILKRDPYDWS 118 (353)
T ss_dssp SCEEECSCTTCHH
T ss_pred CEEEEECCccchh
Confidence 7999999996654
No 293
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.29 E-value=0.00014 Score=65.54 Aligned_cols=114 Identities=12% Similarity=0.055 Sum_probs=67.3
Q ss_pred CCCCCCEEEEECC------CcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCC------CCC
Q 021397 107 NISAGDHVLDLCA------APGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADG------TTF 174 (313)
Q Consensus 107 ~~~~g~~VLDlca------gpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~------~~~ 174 (313)
.+.-|++|||+|| +||+. .+.+..+.++.|+++|+.+--. .. . .++++|. ..+
T Consensus 106 ~vp~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~s-----------da-~-~~IqGD~~~~~~~~k~ 170 (344)
T 3r24_A 106 AVPYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVS-----------DA-D-STLIGDCATVHTANKW 170 (344)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBC-----------SS-S-EEEESCGGGEEESSCE
T ss_pred eecCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCccccc-----------CC-C-eEEEccccccccCCCC
Confidence 3556999999997 99993 4444433335999999976321 11 2 3478885 346
Q ss_pred Cccccc-cccCccccccc----------------------cccccc-ccccccccchhHHHH-HHHHHHHHHhhhhhccc
Q 021397 175 SLAPLR-LLLDPGSCNSV----------------------LQEKDD-TFREWTSRIPWKERK-RAVKARENAASKAIVRS 229 (313)
Q Consensus 175 d~v~~D-~~l~~~s~sg~----------------------l~~~p~-~~~~w~~~~~~~~~~-~~~q~~~l~~~~~~~r~ 229 (313)
|.|+.| .. ..+|. +..... ++|.|++...+.+.. .+.|..+.... ..+|.
T Consensus 171 DLVISDMAP----NtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg~~~L~~lrk~F~~VK~fK-~ASRa 245 (344)
T 3r24_A 171 DLIISDMYD----PRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHFSWWTAFV-TNVNA 245 (344)
T ss_dssp EEEEECCCC----TTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTEEEEEEEE-EGGGT
T ss_pred CEEEecCCC----CcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCCHHHHHHHHhhCCeEEEEC-CCCCC
Confidence 667777 11 22222 111111 567777766433222 33333333333 68899
Q ss_pred cCcceeEeecC
Q 021397 230 EHPELIFYGRR 240 (313)
Q Consensus 230 ~~~El~~~~k~ 240 (313)
+|+|+|++++.
T Consensus 246 ~SsEvYLVG~g 256 (344)
T 3r24_A 246 SSSEAFLIGAN 256 (344)
T ss_dssp TSSCEEEEEEE
T ss_pred CCeeEEEEeee
Confidence 99999999764
No 294
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.27 E-value=0.00029 Score=62.87 Aligned_cols=66 Identities=12% Similarity=0.018 Sum_probs=46.1
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHh------CC-----CcEEEEEcCCH---HHHH-----------HHHHHHHHc----
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDII------GD-----SGSVTGVDVAR---HRLA-----------ACRTLLQKY---- 158 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~------~~-----~~~V~avD~s~---~~l~-----------~~~~~~~~~---- 158 (313)
.+++.+|||+|+|+|..++.+++.. .+ ...++++|..+ +++. .++++++.+
T Consensus 58 ~~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~ 137 (257)
T 2qy6_A 58 PHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPL 137 (257)
T ss_dssp SSSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSC
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccc
Confidence 3456799999999999999887764 33 25899999876 5444 455565542
Q ss_pred ------CCC---CcEEEEecCCCC
Q 021397 159 ------ALG---DRCRLFVADGTT 173 (313)
Q Consensus 159 ------g~~---~~v~~~~~D~~~ 173 (313)
.+. .+++++.+|+..
T Consensus 138 ~g~~r~~~~~~~~~l~l~~GDa~~ 161 (257)
T 2qy6_A 138 PGCHRLLLDEGRVTLDLWFGDINE 161 (257)
T ss_dssp SEEEEEEEC--CEEEEEEESCHHH
T ss_pred cchhheeccCCceEEEEEECcHHH
Confidence 111 267889999854
No 295
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=97.21 E-value=0.0012 Score=62.82 Aligned_cols=63 Identities=17% Similarity=0.231 Sum_probs=51.5
Q ss_pred CCCCCCEEEEECCCcChHHHHHH-HHhCCCcEEEEEcCCHHHHHHHHHHHHH--c-CCCCcEEEEec
Q 021397 107 NISAGDHVLDLCAAPGAKLCMIL-DIIGDSGSVTGVDVARHRLAACRTLLQK--Y-ALGDRCRLFVA 169 (313)
Q Consensus 107 ~~~~g~~VLDlcagpG~kt~~la-~~~~~~~~V~avD~s~~~l~~~~~~~~~--~-g~~~~v~~~~~ 169 (313)
.+++++.|+|+||+.|..|..++ +..++.++|+|+|.++...+.+++|++. + +...+++++..
T Consensus 223 ~l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~ 289 (409)
T 2py6_A 223 RFSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGC 289 (409)
T ss_dssp CCCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECS
T ss_pred ccCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEe
Confidence 45789999999999999999988 4544448999999999999999999998 2 34147877654
No 296
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.88 E-value=0.0012 Score=58.70 Aligned_cols=49 Identities=18% Similarity=0.333 Sum_probs=40.5
Q ss_pred CCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q 021397 109 SAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYAL 160 (313)
Q Consensus 109 ~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~ 160 (313)
.+|+.|||.+||+|..+..+.++ + .+++++|+++..++.++++++..++
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~-g--r~~ig~e~~~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKL-G--RNFIGCDMNAEYVNQANFVLNQLEI 259 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHT-T--CEEEEEESCHHHHHHHHHHHHC---
T ss_pred CCCCEEEECCCCCCHHHHHHHHc-C--CeEEEEeCCHHHHHHHHHHHHhccC
Confidence 68999999999999988776653 3 5899999999999999999986654
No 297
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=96.56 E-value=0.0022 Score=52.10 Aligned_cols=39 Identities=13% Similarity=-0.016 Sum_probs=32.5
Q ss_pred CCCCEEEEECCCcC-hHHHHHHHHhCCCcEEEEEcCCHHHHH
Q 021397 109 SAGDHVLDLCAAPG-AKLCMILDIIGDSGSVTGVDVARHRLA 149 (313)
Q Consensus 109 ~~g~~VLDlcagpG-~kt~~la~~~~~~~~V~avD~s~~~l~ 149 (313)
.++.+|||+|||+| ..+..|++..+ ..|+|+|+++..++
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~~g--~~V~atDInp~Av~ 73 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKHSK--VDLVLTDIKPSHGG 73 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHHSC--CEEEEECSSCSSTT
T ss_pred CCCCcEEEEccCCChHHHHHHHHhCC--CeEEEEECCccccc
Confidence 46789999999999 58999987532 57999999998775
No 298
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=96.07 E-value=0.02 Score=51.84 Aligned_cols=69 Identities=23% Similarity=0.266 Sum_probs=53.5
Q ss_pred HHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHc--C--CCCcEEEEecCCCC
Q 021397 103 VSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKY--A--LGDRCRLFVADGTT 173 (313)
Q Consensus 103 ~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~--g--~~~~v~~~~~D~~~ 173 (313)
+..+.+. ..+||=+|.|-|+.+..+++.-+ ..+|+.+|+++..++.+++.+... + -+.+++++.+|+..
T Consensus 77 ~l~~~p~-pk~VLIiGgGdG~~~revlk~~~-v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~ 149 (294)
T 3o4f_A 77 PLLAHGH-AKHVLIIGGGDGAMLREVTRHKN-VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVN 149 (294)
T ss_dssp HHHHSSC-CCEEEEESCTTSHHHHHHHTCTT-CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTT
T ss_pred HHhhCCC-CCeEEEECCCchHHHHHHHHcCC-cceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHH
Confidence 3344444 46999999999999998887643 368999999999999999887543 1 12589999999964
No 299
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=96.03 E-value=0.00076 Score=60.78 Aligned_cols=107 Identities=12% Similarity=0.035 Sum_probs=71.7
Q ss_pred CcEEeCCCCCCcccccccCCeEEEec-----HHH-HHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCC
Q 021397 71 GFYSLPPDIKIATSMAYKQGKIYGID-----AAS-GAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVA 144 (313)
Q Consensus 71 ~~~~l~~~~~~~~~~~~~~G~~~~Qd-----~ss-~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s 144 (313)
+.|.+.+. .-.++.+|.+|...+.+ +.. .-....+..-.+..+||+.+|+|..++.+.+ +..+++.+|.+
T Consensus 47 G~Y~L~~~-~a~ktgE~~~GI~rl~~~~~~~p~~l~~yf~~l~~~n~~~~LDlfaGSGaLgiEaLS---~~d~~vfvE~~ 122 (283)
T 2oo3_A 47 GIYDLKDK-QSLKTEEYKEGINPVWLDRENLPSLFLEYISVIKQINLNSTLSYYPGSPYFAINQLR---SQDRLYLCELH 122 (283)
T ss_dssp SEEETTCC-----CCGGGGTHHHHHHTGGGSCGGGHHHHHHHHHHSSSSSCCEEECHHHHHHHHSC---TTSEEEEECCS
T ss_pred CccCCCCh-HHhhcHHHHHHHHHHHhcccCCcHHHHHHHHHHHHhcCCCceeEeCCcHHHHHHHcC---CCCeEEEEeCC
Confidence 34555432 24567788888755432 110 0111112112466799999999999998776 33689999999
Q ss_pred HHHHHHHHHHHHHcCCCCcEEEEecCCC-----------CCCccccccccC
Q 021397 145 RHRLAACRTLLQKYALGDRCRLFVADGT-----------TFSLAPLRLLLD 184 (313)
Q Consensus 145 ~~~l~~~~~~~~~~g~~~~v~~~~~D~~-----------~~d~v~~D~~l~ 184 (313)
+..++.+++|++. .+++++++.|+. .|++|++||.+.
T Consensus 123 ~~a~~~L~~Nl~~---~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPPYe 170 (283)
T 2oo3_A 123 PTEYNFLLKLPHF---NKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSYE 170 (283)
T ss_dssp HHHHHHHTTSCCT---TSCEEEECSCHHHHHHHHCSCTTSCEEEEECCCCC
T ss_pred HHHHHHHHHHhCc---CCcEEEEeCcHHHHHHHhcCCCCCccEEEECCCCC
Confidence 9999999999865 247999999962 478899997654
No 300
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=95.99 E-value=0.009 Score=55.30 Aligned_cols=57 Identities=14% Similarity=0.105 Sum_probs=43.8
Q ss_pred CEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 112 DHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 112 ~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.+|+|++||.|+.++.+.+.-.+-..|+++|+++.+++..+.|.. +..++.+|+..+
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~------~~~~~~~Di~~~ 59 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP------HTQLLAKTIEGI 59 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT------TSCEECSCGGGC
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc------ccccccCCHHHc
Confidence 479999999999999888751111379999999999999998852 234677887654
No 301
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=95.78 E-value=0.0064 Score=55.99 Aligned_cols=44 Identities=16% Similarity=0.120 Sum_probs=37.5
Q ss_pred CCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHH
Q 021397 111 GDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQ 156 (313)
Q Consensus 111 g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~ 156 (313)
+.+|+|++||.||.+..+.+. + -..|.++|+++..++..+.|..
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a-G-~~~v~~~e~d~~a~~t~~~N~~ 54 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC-G-AECVYSNEWDKYAQEVYEMNFG 54 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-T-CEEEEEECCCHHHHHHHHHHHS
T ss_pred CCcEEEECCCcCHHHHHHHHC-C-CeEEEEEeCCHHHHHHHHHHcC
Confidence 568999999999999988764 3 3468999999999999998863
No 302
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=95.72 E-value=0.021 Score=53.60 Aligned_cols=55 Identities=16% Similarity=0.146 Sum_probs=44.1
Q ss_pred CEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 112 DHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 112 ~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.+|+|++||.||.+.-+.+. + -..|.|+|+++..++..+.|. . +..++++|+..+
T Consensus 3 ~~vidLFsG~GGlslG~~~a-G-~~~v~avE~d~~a~~t~~~N~-----~-~~~~~~~DI~~~ 57 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA-G-FDVKMAVEIDQHAINTHAINF-----P-RSLHVQEDVSLL 57 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH-T-CEEEEEECSCHHHHHHHHHHC-----T-TSEEECCCGGGC
T ss_pred CeEEEEccCcCHHHHHHHHC-C-CcEEEEEeCCHHHHHHHHHhC-----C-CCceEecChhhc
Confidence 58999999999999988775 2 346789999999999988774 2 456788887655
No 303
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=95.22 E-value=0.22 Score=46.68 Aligned_cols=34 Identities=21% Similarity=0.026 Sum_probs=27.1
Q ss_pred CCEEEEECCCcChHHHHHHHHh----------------CCCcEEEEEcCC
Q 021397 111 GDHVLDLCAAPGAKLCMILDII----------------GDSGSVTGVDVA 144 (313)
Q Consensus 111 g~~VLDlcagpG~kt~~la~~~----------------~~~~~V~avD~s 144 (313)
..+|+|+|||+|..|+.+.+.+ .+.-+|+.+|+-
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp 102 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLF 102 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCC
Confidence 4789999999999999887761 123578999987
No 304
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=95.20 E-value=0.071 Score=49.89 Aligned_cols=45 Identities=22% Similarity=0.201 Sum_probs=32.1
Q ss_pred CCEEEEECCCcChHHHHHHHHh--------------CCCcEEEEEcCCHHHHHHHHHHH
Q 021397 111 GDHVLDLCAAPGAKLCMILDII--------------GDSGSVTGVDVARHRLAACRTLL 155 (313)
Q Consensus 111 g~~VLDlcagpG~kt~~la~~~--------------~~~~~V~avD~s~~~l~~~~~~~ 155 (313)
..+|+|+|||+|..|+.+...+ .+.-+|+.+|+-.+....+=+.+
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L 111 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLL 111 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhh
Confidence 4789999999999999884432 13457888887776665554444
No 305
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=95.04 E-value=0.043 Score=51.41 Aligned_cols=69 Identities=26% Similarity=0.463 Sum_probs=53.1
Q ss_pred CCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHc---CC----CCcEEEEecCCC----------
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKY---AL----GDRCRLFVADGT---------- 172 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~---g~----~~~v~~~~~D~~---------- 172 (313)
+..+||=+|.|-|+....+.+. + ..+|+.||+++..++.+++.+... .. .++++++.+|+.
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh-~-~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~ 282 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKL-K-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 282 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT-C-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCeEEEECCCcHHHHHHHHhc-C-CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhcc
Confidence 4689999999999999988875 3 368999999999999999865321 11 135899999984
Q ss_pred -CCCccccc
Q 021397 173 -TFSLAPLR 180 (313)
Q Consensus 173 -~~d~v~~D 180 (313)
.||.+.+|
T Consensus 283 ~~yDvIIvD 291 (381)
T 3c6k_A 283 REFDYVIND 291 (381)
T ss_dssp CCEEEEEEE
T ss_pred CceeEEEEC
Confidence 36776666
No 306
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=93.87 E-value=0.067 Score=48.92 Aligned_cols=49 Identities=24% Similarity=0.266 Sum_probs=38.3
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCH---HHHHHHHHHHHHcC
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVAR---HRLAACRTLLQKYA 159 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~---~~l~~~~~~~~~~g 159 (313)
-.+|+.|||-.||+|..+....++ + -..+++|+++ ..++.+++++++.|
T Consensus 240 ~~~~~~vlDpF~GsGtt~~aa~~~-~--r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 240 SHPGSTVLDFFAGSGVTARVAIQE-G--RNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp SCTTCEEEETTCTTCHHHHHHHHH-T--CEEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCCCCEEEecCCCCCHHHHHHHHc-C--CcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 368999999999999877666554 3 4799999999 99999999887765
No 307
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=93.74 E-value=0.14 Score=47.94 Aligned_cols=47 Identities=23% Similarity=0.258 Sum_probs=38.9
Q ss_pred hcCCCCCCEEEEECCCc-ChHHHHHHHHhCCCcEEEEEcCCHHHHHHHH
Q 021397 105 ALNISAGDHVLDLCAAP-GAKLCMILDIIGDSGSVTGVDVARHRLAACR 152 (313)
Q Consensus 105 ~l~~~~g~~VLDlcagp-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~ 152 (313)
..++++|++||-.|||+ |..+.++|+.++. .+|+++|.++++++.++
T Consensus 180 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a~ 227 (398)
T 2dph_A 180 SAGVKPGSHVYIAGAGPVGRCAAAGARLLGA-ACVIVGDQNPERLKLLS 227 (398)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHHHTC-SEEEEEESCHHHHHHHH
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCCHHHHHHHH
Confidence 45788999999999877 7778888888752 48999999999988765
No 308
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=93.74 E-value=0.045 Score=50.99 Aligned_cols=63 Identities=13% Similarity=0.000 Sum_probs=42.3
Q ss_pred CEEEEECCCcChHHHHHHHH---------------hCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 112 DHVLDLCAAPGAKLCMILDI---------------IGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 112 ~~VLDlcagpG~kt~~la~~---------------~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
-+|+|+||++|..|+.+.+. -.+.-+|+.+|+-.+....+-+.+....-..+..++.+...+|
T Consensus 53 ~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 53 LAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp ECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred eEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhh
Confidence 57999999999999865543 1234679999999988888876654321101234666666554
No 309
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=93.59 E-value=0.084 Score=47.94 Aligned_cols=55 Identities=11% Similarity=0.099 Sum_probs=43.0
Q ss_pred CEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 021397 112 DHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 112 ~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d 175 (313)
++|||++||.||.+.-+-+. + --.|.|+|+++.+++..+.|. + -.++.+|.+.++
T Consensus 1 mkvidLFsG~GG~~~G~~~a-G-~~~v~a~e~d~~a~~ty~~N~---~----~~~~~~DI~~i~ 55 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKA-G-FRIICANEYDKSIWKTYESNH---S----AKLIKGDISKIS 55 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHT-T-CEEEEEEECCTTTHHHHHHHC---C----SEEEESCGGGCC
T ss_pred CeEEEeCcCccHHHHHHHHC-C-CEEEEEEeCCHHHHHHHHHHC---C----CCcccCChhhCC
Confidence 47999999999999887653 3 246789999999999988773 2 256788987654
No 310
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=93.52 E-value=0.15 Score=46.14 Aligned_cols=60 Identities=15% Similarity=0.143 Sum_probs=44.5
Q ss_pred CCCCEEEEECCCcChHHHHHHHHhCCCcE-EEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 021397 109 SAGDHVLDLCAAPGAKLCMILDIIGDSGS-VTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 109 ~~g~~VLDlcagpG~kt~~la~~~~~~~~-V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d 175 (313)
+.+.+|+|++||.||.+..+.+. +-... |.++|+++..++..+.|. . ...++.+|.+.++
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~a-G~~~~~v~a~E~d~~a~~ty~~N~-----~-~~~~~~~DI~~i~ 74 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDL-GIQVDRYIASEVCEDSITVGMVRH-----Q-GKIMYVGDVRSVT 74 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHT-TBCEEEEEEECCCHHHHHHHHHHT-----T-TCEEEECCGGGCC
T ss_pred CCCCEEEEeCcCccHHHHHHHHC-CCccceEEEEECCHHHHHHHHHhC-----C-CCceeCCChHHcc
Confidence 34568999999999999887764 32222 699999999998888764 1 2457788887654
No 311
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=93.51 E-value=0.053 Score=49.58 Aligned_cols=50 Identities=10% Similarity=0.081 Sum_probs=40.9
Q ss_pred CCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q 021397 108 ISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYAL 160 (313)
Q Consensus 108 ~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~ 160 (313)
-.+|+.|||-.||+|..+... ..++ -..+++|+++..++.+++++++.+.
T Consensus 250 ~~~~~~VlDpF~GsGtt~~aa-~~~g--r~~ig~e~~~~~~~~~~~r~~~~~~ 299 (323)
T 1boo_A 250 TEPDDLVVDIFGGSNTTGLVA-ERES--RKWISFEMKPEYVAASAFRFLDNNI 299 (323)
T ss_dssp CCTTCEEEETTCTTCHHHHHH-HHTT--CEEEEEESCHHHHHHHHGGGSCSCS
T ss_pred CCCCCEEEECCCCCCHHHHHH-HHcC--CCEEEEeCCHHHHHHHHHHHHhccc
Confidence 368999999999999866544 4444 4899999999999999988876664
No 312
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=93.21 E-value=0.12 Score=47.46 Aligned_cols=56 Identities=16% Similarity=0.240 Sum_probs=42.2
Q ss_pred CEEEEECCCcChHHHHHHHHhCCC-cEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 112 DHVLDLCAAPGAKLCMILDIIGDS-GSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 112 ~~VLDlcagpG~kt~~la~~~~~~-~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
-+++|++||.||.+.-+.+. +-. -.|.|+|+++...+..+.|.. ...++.+|...+
T Consensus 4 ~~~idLFaG~GG~~~G~~~a-G~~~~~v~a~e~d~~a~~ty~~N~~------~~~~~~~DI~~~ 60 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKES-GLDGEIVAAVDINTVANSVYKHNFP------ETNLLNRNIQQL 60 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHH-TCSEEEEEEECCCHHHHHHHHHHCT------TSCEECCCGGGC
T ss_pred CEEEEECcCccHHHHHHHHc-CCCceEEEEEeCCHHHHHHHHHhCC------CCceeccccccC
Confidence 37999999999999988765 211 358899999999998887752 234567787654
No 313
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=92.56 E-value=0.32 Score=44.23 Aligned_cols=51 Identities=18% Similarity=0.216 Sum_probs=41.3
Q ss_pred HhcCCCCCCEEEEECCCc-ChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q 021397 104 SALNISAGDHVLDLCAAP-GAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYAL 160 (313)
Q Consensus 104 ~~l~~~~g~~VLDlcagp-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~ 160 (313)
....+++|++||-.|||+ |..+.++++.++ .+|+++|.++++++.++ ++|.
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~----~lGa 211 (340)
T 3s2e_A 160 KVTDTRPGQWVVISGIGGLGHVAVQYARAMG--LRVAAVDIDDAKLNLAR----RLGA 211 (340)
T ss_dssp HTTTCCTTSEEEEECCSTTHHHHHHHHHHTT--CEEEEEESCHHHHHHHH----HTTC
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHH----HcCC
Confidence 345788999999999876 777888888775 58999999999988765 4675
No 314
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=92.50 E-value=0.32 Score=45.29 Aligned_cols=51 Identities=22% Similarity=0.292 Sum_probs=40.1
Q ss_pred hcCCCCCCEEEEECCCc-ChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q 021397 105 ALNISAGDHVLDLCAAP-GAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYAL 160 (313)
Q Consensus 105 ~l~~~~g~~VLDlcagp-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~ 160 (313)
...+++|++||-.|||+ |..+.++|+.++. ..|+++|.++++++.++ ++|.
T Consensus 180 ~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga-~~Vi~~~~~~~~~~~a~----~lGa 231 (398)
T 1kol_A 180 TAGVGPGSTVYVAGAGPVGLAAAASARLLGA-AVVIVGDLNPARLAHAK----AQGF 231 (398)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEEESCHHHHHHHH----HTTC
T ss_pred HcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-CeEEEEcCCHHHHHHHH----HcCC
Confidence 34788999999999876 6667788887652 37999999999988775 4565
No 315
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=92.29 E-value=0.32 Score=44.79 Aligned_cols=48 Identities=19% Similarity=0.359 Sum_probs=38.7
Q ss_pred hcCCCCCCEEEEECCCc-ChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHH
Q 021397 105 ALNISAGDHVLDLCAAP-GAKLCMILDIIGDSGSVTGVDVARHRLAACRT 153 (313)
Q Consensus 105 ~l~~~~g~~VLDlcagp-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~ 153 (313)
..++++|++||-.|||+ |..+.++|+.++. ..|+++|.++++++.+++
T Consensus 185 ~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~~Vi~~~~~~~~~~~a~~ 233 (371)
T 1f8f_A 185 ALKVTPASSFVTWGAGAVGLSALLAAKVCGA-SIIIAVDIVESRLELAKQ 233 (371)
T ss_dssp TTCCCTTCEEEEESCSHHHHHHHHHHHHHTC-SEEEEEESCHHHHHHHHH
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEECCCHHHHHHHHH
Confidence 45788999999999876 6677788887752 379999999999887753
No 316
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=92.27 E-value=0.31 Score=44.67 Aligned_cols=53 Identities=21% Similarity=0.330 Sum_probs=40.5
Q ss_pred HhcCCCCCCEEEEECCCc-ChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCC
Q 021397 104 SALNISAGDHVLDLCAAP-GAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALG 161 (313)
Q Consensus 104 ~~l~~~~g~~VLDlcagp-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~ 161 (313)
....+++|++||-.|+|+ |..+.++|+.++. ..|+++|.++.+++.++ ++|..
T Consensus 165 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a~----~lGa~ 218 (356)
T 1pl8_A 165 RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGA-AQVVVTDLSATRLSKAK----EIGAD 218 (356)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEEESCHHHHHHHH----HTTCS
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEECCCHHHHHHHH----HhCCC
Confidence 345789999999999876 6667777777642 38999999999988765 46763
No 317
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=91.28 E-value=0.33 Score=44.42 Aligned_cols=57 Identities=9% Similarity=0.032 Sum_probs=42.3
Q ss_pred CCEEEEECCCcChHHHHHHHHhCC-CcEE-EEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 021397 111 GDHVLDLCAAPGAKLCMILDIIGD-SGSV-TGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 111 g~~VLDlcagpG~kt~~la~~~~~-~~~V-~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d 175 (313)
.-+++|++||.||.+.-+.+. +- ...| .|+|+++..++..+.|.. +. ++.+|.+.++
T Consensus 10 ~~~vidLFaG~GG~~~G~~~a-G~~~~~v~~a~e~d~~a~~ty~~N~~-----~~--~~~~DI~~~~ 68 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERS-SININATFIPFDINEIANKIYSKNFK-----EE--VQVKNLDSIS 68 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHS-SCCCCEEEEEECCCHHHHHHHHHHHC-----CC--CBCCCTTTCC
T ss_pred CCEEEEECCChhHHHHHHHHc-CCCceEEEEEEECCHHHHHHHHHHCC-----CC--cccCChhhcC
Confidence 358999999999999888763 21 1246 799999999999998862 11 5567776553
No 318
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=90.92 E-value=0.43 Score=44.08 Aligned_cols=49 Identities=12% Similarity=0.141 Sum_probs=39.0
Q ss_pred cCCCCCCEEEEECCCc-ChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q 021397 106 LNISAGDHVLDLCAAP-GAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYAL 160 (313)
Q Consensus 106 l~~~~g~~VLDlcagp-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~ 160 (313)
+.+++|++||-.|+|+ |..+.++|+.++ ..|+++|.++++++.+++ +|.
T Consensus 190 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G--a~Vi~~~~~~~~~~~a~~----lGa 239 (369)
T 1uuf_A 190 WQAGPGKKVGVVGIGGLGHMGIKLAHAMG--AHVVAFTTSEAKREAAKA----LGA 239 (369)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSGGGHHHHHH----HTC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH----cCC
Confidence 4788999999999875 666777777764 479999999999887763 565
No 319
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=90.68 E-value=0.58 Score=42.72 Aligned_cols=52 Identities=19% Similarity=0.257 Sum_probs=39.6
Q ss_pred HhcCCCCCCEEEEECCCc-ChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCC
Q 021397 104 SALNISAGDHVLDLCAAP-GAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALG 161 (313)
Q Consensus 104 ~~l~~~~g~~VLDlcagp-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~ 161 (313)
...++++|++||-.|+|+ |..+.++|+.++ ..|+++|.++++++.++ ++|..
T Consensus 162 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~----~lGa~ 214 (352)
T 1e3j_A 162 RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYG--AFVVCTARSPRRLEVAK----NCGAD 214 (352)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHH----HTTCS
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEcCCHHHHHHHH----HhCCC
Confidence 345789999999999765 555667777664 46999999999988765 46763
No 320
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=90.63 E-value=0.4 Score=43.70 Aligned_cols=51 Identities=12% Similarity=0.069 Sum_probs=40.2
Q ss_pred hcCCCCCCEEEEECCCc-ChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCC
Q 021397 105 ALNISAGDHVLDLCAAP-GAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALG 161 (313)
Q Consensus 105 ~l~~~~g~~VLDlcagp-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~ 161 (313)
...+++|++||=.|||+ |..+.++|+.++ .+|+++|.++++++.++ ++|..
T Consensus 171 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~----~lGa~ 222 (348)
T 3two_A 171 FSKVTKGTKVGVAGFGGLGSMAVKYAVAMG--AEVSVFARNEHKKQDAL----SMGVK 222 (348)
T ss_dssp HTTCCTTCEEEEESCSHHHHHHHHHHHHTT--CEEEEECSSSTTHHHHH----HTTCS
T ss_pred hcCCCCCCEEEEECCcHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHH----hcCCC
Confidence 34788999999999876 666777787765 58999999999988765 46763
No 321
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=90.26 E-value=0.51 Score=43.11 Aligned_cols=52 Identities=23% Similarity=0.305 Sum_probs=39.4
Q ss_pred HhcCCCCCCEEEEECCCc-ChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q 021397 104 SALNISAGDHVLDLCAAP-GAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYAL 160 (313)
Q Consensus 104 ~~l~~~~g~~VLDlcagp-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~ 160 (313)
....+++|++||=.|+|+ |..+.++|+.++. ..|+++|.++++++.++ ++|.
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~~Vi~~~~~~~~~~~~~----~lGa 212 (352)
T 3fpc_A 160 ELANIKLGDTVCVIGIGPVGLMSVAGANHLGA-GRIFAVGSRKHCCDIAL----EYGA 212 (352)
T ss_dssp HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTC-SSEEEECCCHHHHHHHH----HHTC
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-cEEEEECCCHHHHHHHH----HhCC
Confidence 456789999999999865 5556677776542 37999999999988765 4565
No 322
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=90.23 E-value=0.66 Score=42.13 Aligned_cols=50 Identities=22% Similarity=0.280 Sum_probs=40.2
Q ss_pred CCCCCCEEEEECCCc-ChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCC
Q 021397 107 NISAGDHVLDLCAAP-GAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALG 161 (313)
Q Consensus 107 ~~~~g~~VLDlcagp-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~ 161 (313)
.+++|++||=.|+|+ |..+.++|+.++. .+|+++|.++++++.++ ++|..
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~-~~Vi~~~~~~~~~~~~~----~lGa~ 218 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSA-ARVIAVDLDDDRLALAR----EVGAD 218 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCC-CEEEEEESCHHHHHHHH----HTTCS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCCHHHHHHHH----HcCCC
Confidence 678999999999876 6667788887743 68999999999988765 46763
No 323
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=89.16 E-value=1 Score=41.42 Aligned_cols=53 Identities=15% Similarity=0.080 Sum_probs=40.8
Q ss_pred HhcCCCCCCEEEEECCCc-ChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCC
Q 021397 104 SALNISAGDHVLDLCAAP-GAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALG 161 (313)
Q Consensus 104 ~~l~~~~g~~VLDlcagp-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~ 161 (313)
....+++|++||=.|+|+ |..+.++|+.++. ..|+++|.++++++.+++ +|..
T Consensus 176 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a~~----lGa~ 229 (370)
T 4ej6_A 176 DLSGIKAGSTVAILGGGVIGLLTVQLARLAGA-TTVILSTRQATKRRLAEE----VGAT 229 (370)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEECSCHHHHHHHHH----HTCS
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEECCCHHHHHHHHH----cCCC
Confidence 456789999999999866 6667777777652 489999999999887654 6763
No 324
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=88.98 E-value=0.73 Score=42.38 Aligned_cols=51 Identities=10% Similarity=0.176 Sum_probs=39.4
Q ss_pred hcCCCCCCEEEEECCCc-ChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q 021397 105 ALNISAGDHVLDLCAAP-GAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYAL 160 (313)
Q Consensus 105 ~l~~~~g~~VLDlcagp-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~ 160 (313)
...+++|++||=.|||+ |..+.++|+.++. ..|+++|.++++++.++ ++|.
T Consensus 186 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a~----~lGa 237 (373)
T 1p0f_A 186 TAKVTPGSTCAVFGLGGVGFSAIVGCKAAGA-SRIIGVGTHKDKFPKAI----ELGA 237 (373)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHHTC-SEEEEECSCGGGHHHHH----HTTC
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEECCCHHHHHHHH----HcCC
Confidence 45688999999999765 5556777777652 37999999999988765 4676
No 325
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=88.74 E-value=0.77 Score=42.24 Aligned_cols=51 Identities=12% Similarity=0.219 Sum_probs=38.7
Q ss_pred hcCCCCCCEEEEECCCc-ChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q 021397 105 ALNISAGDHVLDLCAAP-GAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYAL 160 (313)
Q Consensus 105 ~l~~~~g~~VLDlcagp-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~ 160 (313)
..++++|++||-.|+|+ |..+.++|+.++. .+|+++|.++++++.++ ++|.
T Consensus 187 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~~Vi~~~~~~~~~~~~~----~lGa 238 (374)
T 1cdo_A 187 TAKVEPGSTCAVFGLGAVGLAAVMGCHSAGA-KRIIAVDLNPDKFEKAK----VFGA 238 (374)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEECSCGGGHHHHH----HTTC
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCCHHHHHHHH----HhCC
Confidence 35688999999999765 5556677777642 37999999999988765 4675
No 326
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=88.46 E-value=0.88 Score=41.78 Aligned_cols=51 Identities=16% Similarity=0.354 Sum_probs=38.9
Q ss_pred hcCCCCCCEEEEECCCc-ChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q 021397 105 ALNISAGDHVLDLCAAP-GAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYAL 160 (313)
Q Consensus 105 ~l~~~~g~~VLDlcagp-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~ 160 (313)
..++++|++||=.|+|+ |..+.++|+.++. ..|+++|.++++++.++ ++|.
T Consensus 185 ~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga-~~Vi~~~~~~~~~~~~~----~lGa 236 (373)
T 2fzw_A 185 TAKLEPGSVCAVFGLGGVGLAVIMGCKVAGA-SRIIGVDINKDKFARAK----EFGA 236 (373)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHHTC-SEEEEECSCGGGHHHHH----HHTC
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCCHHHHHHHH----HcCC
Confidence 35688999999999765 5556677777652 37999999999988765 4565
No 327
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=88.45 E-value=0.82 Score=42.04 Aligned_cols=51 Identities=16% Similarity=0.308 Sum_probs=38.6
Q ss_pred hcCCCCCCEEEEECCCc-ChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q 021397 105 ALNISAGDHVLDLCAAP-GAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYAL 160 (313)
Q Consensus 105 ~l~~~~g~~VLDlcagp-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~ 160 (313)
..++++|++||=.|+|+ |..+.++|+.++. ..|+++|.++++++.++ ++|.
T Consensus 186 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~~Vi~~~~~~~~~~~~~----~lGa 237 (374)
T 2jhf_A 186 VAKVTQGSTCAVFGLGGVGLSVIMGCKAAGA-ARIIGVDINKDKFAKAK----EVGA 237 (374)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEECSCGGGHHHHH----HTTC
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCCHHHHHHHH----HhCC
Confidence 35688999999999765 5556677776642 37999999999988764 4675
No 328
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=88.40 E-value=0.83 Score=42.03 Aligned_cols=51 Identities=10% Similarity=0.231 Sum_probs=38.6
Q ss_pred hcCCCCCCEEEEECCCc-ChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q 021397 105 ALNISAGDHVLDLCAAP-GAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYAL 160 (313)
Q Consensus 105 ~l~~~~g~~VLDlcagp-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~ 160 (313)
..++++|++||=.|+|+ |..+.++|+.++ ...|+++|.++++++.++ ++|.
T Consensus 190 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa 241 (376)
T 1e3i_A 190 TAKVTPGSTCAVFGLGCVGLSAIIGCKIAG-ASRIIAIDINGEKFPKAK----ALGA 241 (376)
T ss_dssp TSCCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHH----HTTC
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHH----HhCC
Confidence 35688999999999765 555667777764 237999999999988764 4675
No 329
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=88.29 E-value=0.75 Score=42.14 Aligned_cols=49 Identities=10% Similarity=0.064 Sum_probs=38.4
Q ss_pred cCCCCCCEEEEECCCc-ChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q 021397 106 LNISAGDHVLDLCAAP-GAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYAL 160 (313)
Q Consensus 106 l~~~~g~~VLDlcagp-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~ 160 (313)
.++++|++||-.|+|+ |..+.++|+.++ .+|+++|.++++++.+++ +|.
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~G--a~Vi~~~~~~~~~~~~~~----lGa 224 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAMG--AETYVISRSSRKREDAMK----MGA 224 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHHT--CEEEEEESSSTTHHHHHH----HTC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHH----cCC
Confidence 5788999999999855 555667777765 479999999999887653 565
No 330
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=88.20 E-value=0.9 Score=41.54 Aligned_cols=50 Identities=22% Similarity=0.283 Sum_probs=38.9
Q ss_pred HhcCCCCCCEEEEECCCc-ChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHH
Q 021397 104 SALNISAGDHVLDLCAAP-GAKLCMILDIIGDSGSVTGVDVARHRLAACRTL 154 (313)
Q Consensus 104 ~~l~~~~g~~VLDlcagp-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~ 154 (313)
....+++|++||=.|||+ |..+.++|+.++. ..|+++|.++++++.+++.
T Consensus 173 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a~~l 223 (363)
T 3m6i_A 173 QRAGVRLGDPVLICGAGPIGLITMLCAKAAGA-CPLVITDIDEGRLKFAKEI 223 (363)
T ss_dssp HHHTCCTTCCEEEECCSHHHHHHHHHHHHTTC-CSEEEEESCHHHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHh
Confidence 345789999999999866 6667777777652 3499999999999988753
No 331
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=88.07 E-value=1.1 Score=40.59 Aligned_cols=44 Identities=11% Similarity=0.077 Sum_probs=35.9
Q ss_pred CCCCCCEEEEECCCc-ChHHHHHHHHh--CCCcEEEEEcCCHHHHHHHHH
Q 021397 107 NISAGDHVLDLCAAP-GAKLCMILDII--GDSGSVTGVDVARHRLAACRT 153 (313)
Q Consensus 107 ~~~~g~~VLDlcagp-G~kt~~la~~~--~~~~~V~avD~s~~~l~~~~~ 153 (313)
++ +|++||-.|+|+ |..+.++|+.+ + .+|+++|.++++++.+++
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~G--a~Vi~~~~~~~~~~~~~~ 214 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKN--ITIVGISRSKKHRDFALE 214 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTT--CEEEEECSCHHHHHHHHH
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCC--CEEEEEeCCHHHHHHHHH
Confidence 77 999999999865 55677778777 5 579999999999887753
No 332
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=88.03 E-value=0.9 Score=41.66 Aligned_cols=51 Identities=18% Similarity=0.114 Sum_probs=39.5
Q ss_pred hcCCCCCCEEEEECCCc-ChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCC
Q 021397 105 ALNISAGDHVLDLCAAP-GAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALG 161 (313)
Q Consensus 105 ~l~~~~g~~VLDlcagp-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~ 161 (313)
...+++|++||=.|+|+ |..+.++|+..+ .+|+++|.++++++.++ ++|..
T Consensus 184 ~~~~~~g~~VlV~G~G~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~----~lGa~ 235 (363)
T 3uog_A 184 KGHLRAGDRVVVQGTGGVALFGLQIAKATG--AEVIVTSSSREKLDRAF----ALGAD 235 (363)
T ss_dssp TTCCCTTCEEEEESSBHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHH----HHTCS
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEecCchhHHHHH----HcCCC
Confidence 35688999999999776 556677777765 58999999999988765 46763
No 333
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=87.68 E-value=0.61 Score=45.03 Aligned_cols=59 Identities=17% Similarity=0.115 Sum_probs=42.5
Q ss_pred CCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 111 GDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 111 g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.-+++|++||.||.+.-+.+. + --.|.|+|+++..++..+.|.. ......++.+|+..+
T Consensus 88 ~~~viDLFaG~GGlslG~~~a-G-~~~v~avE~d~~A~~ty~~N~~---~~p~~~~~~~DI~~i 146 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI-G-GQCVFTSEWNKHAVRTYKANHY---CDPATHHFNEDIRDI 146 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT-T-EEEEEEECCCHHHHHHHHHHSC---CCTTTCEEESCTHHH
T ss_pred cceEEEecCCccHHHHHHHHC-C-CEEEEEEeCCHHHHHHHHHhcc---cCCCcceeccchhhh
Confidence 458999999999999888653 2 2358999999999988887742 111234566777543
No 334
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=87.66 E-value=1.4 Score=39.78 Aligned_cols=51 Identities=16% Similarity=0.145 Sum_probs=38.5
Q ss_pred hcCCCCCCEEEEECCCcCh-HHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q 021397 105 ALNISAGDHVLDLCAAPGA-KLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYAL 160 (313)
Q Consensus 105 ~l~~~~g~~VLDlcagpG~-kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~ 160 (313)
...+++|++||=.|+|+++ .+.++++.++ ..+|+++|.++++++.++ ++|.
T Consensus 158 ~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~-g~~Vi~~~~~~~r~~~~~----~~Ga 209 (348)
T 4eez_A 158 VSGVKPGDWQVIFGAGGLGNLAIQYAKNVF-GAKVIAVDINQDKLNLAK----KIGA 209 (348)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTS-CCEEEEEESCHHHHHHHH----HTTC
T ss_pred ccCCCCCCEEEEEcCCCccHHHHHHHHHhC-CCEEEEEECcHHHhhhhh----hcCC
Confidence 4578899999999998854 4555666554 379999999999987654 4565
No 335
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=87.33 E-value=1.6 Score=39.50 Aligned_cols=49 Identities=16% Similarity=0.219 Sum_probs=37.7
Q ss_pred cCCCCCCEEEEECCCc-ChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q 021397 106 LNISAGDHVLDLCAAP-GAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYAL 160 (313)
Q Consensus 106 l~~~~g~~VLDlcagp-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~ 160 (313)
..+++|++||-.|+|+ |..+.++++..+ .+|+++|.++.+++.++ ++|.
T Consensus 160 ~~~~~g~~VlV~GaG~vG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~----~lGa 209 (339)
T 1rjw_A 160 TGAKPGEWVAIYGIGGLGHVAVQYAKAMG--LNVVAVDIGDEKLELAK----ELGA 209 (339)
T ss_dssp HTCCTTCEEEEECCSTTHHHHHHHHHHTT--CEEEEECSCHHHHHHHH----HTTC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHH----HCCC
Confidence 4788999999999864 455666666654 58999999999988765 4665
No 336
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=87.29 E-value=0.7 Score=42.65 Aligned_cols=53 Identities=13% Similarity=0.339 Sum_probs=40.5
Q ss_pred HhcCCCCCCEEEEECCCc-ChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCC
Q 021397 104 SALNISAGDHVLDLCAAP-GAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALG 161 (313)
Q Consensus 104 ~~l~~~~g~~VLDlcagp-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~ 161 (313)
....+++|++||=.|||+ |..+.++|+.++. .+|+++|.++++++.++ ++|..
T Consensus 187 ~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga-~~Vi~~~~~~~~~~~a~----~lGa~ 240 (378)
T 3uko_A 187 NTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGA-SRIIGIDIDSKKYETAK----KFGVN 240 (378)
T ss_dssp TTTCCCTTCCEEEECCSHHHHHHHHHHHHHTC-SCEEEECSCTTHHHHHH----TTTCC
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCCHHHHHHHH----HcCCc
Confidence 345788999999999865 6667777877753 37999999999988665 46753
No 337
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=87.09 E-value=0.78 Score=46.79 Aligned_cols=46 Identities=13% Similarity=-0.050 Sum_probs=35.9
Q ss_pred CCCEEEEECCCcChHHHHHHHHhCC----CcEEEEEcCCHHHHHHHHHHH
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIGD----SGSVTGVDVARHRLAACRTLL 155 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~~----~~~V~avD~s~~~l~~~~~~~ 155 (313)
+..+|+|+.||.||.++-+.+..+. --.+.|+|+++.+++..+.|.
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 3458999999999999888664210 025899999999999988774
No 338
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=86.89 E-value=1.4 Score=40.63 Aligned_cols=51 Identities=22% Similarity=0.203 Sum_probs=37.7
Q ss_pred hcC-CCCCCEEEEECCCc-ChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q 021397 105 ALN-ISAGDHVLDLCAAP-GAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYAL 160 (313)
Q Consensus 105 ~l~-~~~g~~VLDlcagp-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~ 160 (313)
.++ +++|++||-.|+|+ |..+.++|+.++ ..+|+++|.++++++.++ ++|.
T Consensus 189 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~~~----~lGa 241 (380)
T 1vj0_A 189 EYPESFAGKTVVIQGAGPLGLFGVVIARSLG-AENVIVIAGSPNRLKLAE----EIGA 241 (380)
T ss_dssp TCSSCCBTCEEEEECCSHHHHHHHHHHHHTT-BSEEEEEESCHHHHHHHH----HTTC
T ss_pred hcCCCCCCCEEEEECcCHHHHHHHHHHHHcC-CceEEEEcCCHHHHHHHH----HcCC
Confidence 356 88999999999654 444566666653 148999999999988765 4675
No 339
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=85.24 E-value=1.1 Score=40.18 Aligned_cols=47 Identities=19% Similarity=0.118 Sum_probs=37.1
Q ss_pred HhcCCCCCCEEEEECCCc-ChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHH
Q 021397 104 SALNISAGDHVLDLCAAP-GAKLCMILDIIGDSGSVTGVDVARHRLAACRT 153 (313)
Q Consensus 104 ~~l~~~~g~~VLDlcagp-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~ 153 (313)
....+++|++||=.|+|+ |..+.++|+.++ .+|++++ ++++++.+++
T Consensus 136 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~G--a~Vi~~~-~~~~~~~~~~ 183 (315)
T 3goh_A 136 EKIPLTKQREVLIVGFGAVNNLLTQMLNNAG--YVVDLVS-ASLSQALAAK 183 (315)
T ss_dssp TTSCCCSCCEEEEECCSHHHHHHHHHHHHHT--CEEEEEC-SSCCHHHHHH
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEE-ChhhHHHHHH
Confidence 345688999999999964 666777888775 4899999 9998887754
No 340
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=84.66 E-value=1.1 Score=40.51 Aligned_cols=48 Identities=15% Similarity=0.145 Sum_probs=39.0
Q ss_pred HhcCCCCCCEEEEECCC--cChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHH
Q 021397 104 SALNISAGDHVLDLCAA--PGAKLCMILDIIGDSGSVTGVDVARHRLAACRT 153 (313)
Q Consensus 104 ~~l~~~~g~~VLDlcag--pG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~ 153 (313)
....+++|++||=.|+| -|..+.++++..+ .+|+++|.++++++.+++
T Consensus 138 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~ 187 (340)
T 3gms_A 138 ETLNLQRNDVLLVNACGSAIGHLFAQLSQILN--FRLIAVTRNNKHTEELLR 187 (340)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEESSSTTHHHHHH
T ss_pred HhcccCCCCEEEEeCCccHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh
Confidence 44678999999999987 5667778888775 589999999999887764
No 341
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=84.56 E-value=0.91 Score=42.75 Aligned_cols=45 Identities=11% Similarity=0.079 Sum_probs=35.6
Q ss_pred CEEEEECCCcChHHHHHHHHhCCCcE----EEEEcCCHHHHHHHHHHHH
Q 021397 112 DHVLDLCAAPGAKLCMILDIIGDSGS----VTGVDVARHRLAACRTLLQ 156 (313)
Q Consensus 112 ~~VLDlcagpG~kt~~la~~~~~~~~----V~avD~s~~~l~~~~~~~~ 156 (313)
-+|+|+|||.||.+..+-+.-.+-.. |.++|+++.+++..+.|..
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~ 59 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHS 59 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHC
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcC
Confidence 48999999999999888764210123 8999999999999888864
No 342
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=83.68 E-value=2 Score=39.93 Aligned_cols=49 Identities=24% Similarity=0.330 Sum_probs=37.4
Q ss_pred CCCCCCEEEEECCCc-ChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q 021397 107 NISAGDHVLDLCAAP-GAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYAL 160 (313)
Q Consensus 107 ~~~~g~~VLDlcagp-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~ 160 (313)
.+++|++||=.|||+ |..+.++|+.++ ...|+++|.++.+++.++ ++|.
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~~~----~lGa 259 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAG-ASKVILSEPSEVRRNLAK----ELGA 259 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCHHHHHHHH----HHTC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHH----HcCC
Confidence 578999999999855 555666777664 248999999999988775 4565
No 343
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=82.63 E-value=3.6 Score=36.97 Aligned_cols=55 Identities=18% Similarity=0.184 Sum_probs=41.0
Q ss_pred HHHhcCCCCCCEEEEECCCcCh-HHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCC
Q 021397 102 AVSALNISAGDHVLDLCAAPGA-KLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALG 161 (313)
Q Consensus 102 ~~~~l~~~~g~~VLDlcagpG~-kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~ 161 (313)
......+++|++||=.|||+.| .+.++++.++. ..++++|.++++++.++ ++|..
T Consensus 152 ~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~-~~vi~~~~~~~k~~~a~----~lGa~ 207 (346)
T 4a2c_A 152 AFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGA-KSVTAIDISSEKLALAK----SFGAM 207 (346)
T ss_dssp HHHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTC-SEEEEEESCHHHHHHHH----HTTCS
T ss_pred HHHHhccCCCCEEEEECCCCcchHHHHHHHHcCC-cEEEEEechHHHHHHHH----HcCCe
Confidence 4455678899999999987754 45667777653 57899999999988765 56763
No 344
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=82.41 E-value=3.4 Score=37.38 Aligned_cols=45 Identities=22% Similarity=0.380 Sum_probs=35.1
Q ss_pred cCCCCCCEEEEECCC--cChHHHHHHHHh-CCCcEEEEEcCCHHHHHHHH
Q 021397 106 LNISAGDHVLDLCAA--PGAKLCMILDII-GDSGSVTGVDVARHRLAACR 152 (313)
Q Consensus 106 l~~~~g~~VLDlcag--pG~kt~~la~~~-~~~~~V~avD~s~~~l~~~~ 152 (313)
..+++|++||-.|+| -|..+.+++... + .+|+++|.++.+++.++
T Consensus 166 ~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~G--a~Vi~~~~~~~~~~~~~ 213 (347)
T 1jvb_A 166 ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSG--ATIIGVDVREEAVEAAK 213 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHHTC--CEEEEEESSHHHHHHHH
T ss_pred cCCCCCCEEEEECCCccHHHHHHHHHHHcCC--CeEEEEcCCHHHHHHHH
Confidence 578899999999987 344555666665 4 58999999999988765
No 345
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=82.20 E-value=3.5 Score=37.57 Aligned_cols=49 Identities=16% Similarity=0.255 Sum_probs=36.8
Q ss_pred cCCCCCCEEEEECCCc-ChHHHHHHHHh-CCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q 021397 106 LNISAGDHVLDLCAAP-GAKLCMILDII-GDSGSVTGVDVARHRLAACRTLLQKYAL 160 (313)
Q Consensus 106 l~~~~g~~VLDlcagp-G~kt~~la~~~-~~~~~V~avD~s~~~l~~~~~~~~~~g~ 160 (313)
.++++|++||=.|+|+ |..+.++|+.+ + .+|+++|.++++++.++ ++|.
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~G--a~Vi~~~~~~~~~~~~~----~lGa 232 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMTP--ATVIALDVKEEKLKLAE----RLGA 232 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHCC--CEEEEEESSHHHHHHHH----HTTC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCC--CeEEEEeCCHHHHHHHH----HhCC
Confidence 6788999999999853 23345666666 4 58999999999988765 4675
No 346
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=81.91 E-value=2 Score=35.38 Aligned_cols=46 Identities=20% Similarity=0.208 Sum_probs=32.6
Q ss_pred hcCCCCCCEEEEECCC--cChHHHHHHHHhCCCcEEEEEcCCHHHHHHHH
Q 021397 105 ALNISAGDHVLDLCAA--PGAKLCMILDIIGDSGSVTGVDVARHRLAACR 152 (313)
Q Consensus 105 ~l~~~~g~~VLDlcag--pG~kt~~la~~~~~~~~V~avD~s~~~l~~~~ 152 (313)
..++++|++||-.|++ -|..+..++...+ .+|+++|.++++++.++
T Consensus 33 ~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G--~~V~~~~~~~~~~~~~~ 80 (198)
T 1pqw_A 33 VGRLSPGERVLIHSATGGVGMAAVSIAKMIG--ARIYTTAGSDAKREMLS 80 (198)
T ss_dssp TSCCCTTCEEEETTTTSHHHHHHHHHHHHHT--CEEEEEESSHHHHHHHH
T ss_pred HhCCCCCCEEEEeeCCChHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHH
Confidence 3578899999999853 2334445555444 58999999998877654
No 347
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=81.83 E-value=2.2 Score=38.66 Aligned_cols=50 Identities=24% Similarity=0.172 Sum_probs=36.2
Q ss_pred hcCCCCCCEEEEECCCc-ChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q 021397 105 ALNISAGDHVLDLCAAP-GAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYAL 160 (313)
Q Consensus 105 ~l~~~~g~~VLDlcagp-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~ 160 (313)
...+ +|++||-.|+|+ |..+.++++.++. .+|+++|.++++++.++ ++|.
T Consensus 163 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga-~~Vi~~~~~~~~~~~~~----~~Ga 213 (348)
T 2d8a_A 163 AGPI-SGKSVLITGAGPLGLLGIAVAKASGA-YPVIVSEPSDFRRELAK----KVGA 213 (348)
T ss_dssp TSCC-TTCCEEEECCSHHHHHHHHHHHHTTC-CSEEEECSCHHHHHHHH----HHTC
T ss_pred hcCC-CCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEECCCHHHHHHHH----HhCC
Confidence 3467 899999999854 4455666666542 27999999999888765 3565
No 348
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=80.34 E-value=2.8 Score=37.92 Aligned_cols=45 Identities=24% Similarity=0.216 Sum_probs=33.5
Q ss_pred cCCCCCCEEEEECC--CcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHH
Q 021397 106 LNISAGDHVLDLCA--APGAKLCMILDIIGDSGSVTGVDVARHRLAACR 152 (313)
Q Consensus 106 l~~~~g~~VLDlca--gpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~ 152 (313)
.++++|++||-.|+ |.|..+.+++...+ .+|+++|.++.+++.++
T Consensus 165 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G--a~V~~~~~~~~~~~~~~ 211 (347)
T 2hcy_A 165 ANLMAGHWVAISGAAGGLGSLAVQYAKAMG--YRVLGIDGGEGKEELFR 211 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEECSTTHHHHHH
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHCC--CcEEEEcCCHHHHHHHH
Confidence 46889999999998 34455555665543 58999999998886654
No 349
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=79.77 E-value=3.4 Score=37.30 Aligned_cols=45 Identities=22% Similarity=0.367 Sum_probs=35.7
Q ss_pred cCCCCCCEEEEECC--CcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHH
Q 021397 106 LNISAGDHVLDLCA--APGAKLCMILDIIGDSGSVTGVDVARHRLAACR 152 (313)
Q Consensus 106 l~~~~g~~VLDlca--gpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~ 152 (313)
.++++|++||-.|+ |-|..+.++++..+ .+|+++|.++++++.++
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G--~~Vi~~~~~~~~~~~~~ 208 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLFG--ARVIATAGSEDKLRRAK 208 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHTT--CEEEEEESSHHHHHHHH
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH
Confidence 36789999999998 44556667777654 58999999999988775
No 350
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=79.38 E-value=7.8 Score=33.77 Aligned_cols=62 Identities=16% Similarity=0.017 Sum_probs=48.6
Q ss_pred CCCEEEEECCCcChHHHHHHHHh-CCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDII-GDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~-~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
+|..+|=-|++. |.+..+|+.+ ..+..|+.+|.+++.++.+.+.++..|. ++..+..|.++.
T Consensus 6 ~gKvalVTGas~-GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~--~~~~~~~Dvt~~ 68 (254)
T 4fn4_A 6 KNKVVIVTGAGS-GIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGK--EVLGVKADVSKK 68 (254)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTSH
T ss_pred CCCEEEEeCCCC-HHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEEccCCCH
Confidence 477888778665 5666666654 3456899999999999999999988875 688999998753
No 351
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=79.08 E-value=0.55 Score=47.12 Aligned_cols=43 Identities=5% Similarity=-0.082 Sum_probs=30.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-----------CCcEEEEEcCCHHHHHHHH
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-----------DSGSVTGVDVARHRLAACR 152 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-----------~~~~V~avD~s~~~l~~~~ 152 (313)
+.-+|+|+|-|+|...+.+.+... ...+++++|..+-..+.++
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~ 111 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLA 111 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHH
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHH
Confidence 345899999999999988876531 1247999999554433333
No 352
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=78.75 E-value=1.6 Score=39.48 Aligned_cols=47 Identities=30% Similarity=0.389 Sum_probs=34.9
Q ss_pred hcCCCCCCEEEEECCCc-ChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHH
Q 021397 105 ALNISAGDHVLDLCAAP-GAKLCMILDIIGDSGSVTGVDVARHRLAACRT 153 (313)
Q Consensus 105 ~l~~~~g~~VLDlcagp-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~ 153 (313)
..++ +|++||-.|+|+ |..+.++|+.++. .+|+++|.++++++.+++
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga-~~Vi~~~~~~~~~~~~~~ 207 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRASGA-GPILVSDPNPYRLAFARP 207 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHTTC-CSEEEECSCHHHHGGGTT
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEECCCHHHHHHHHH
Confidence 4567 999999999854 4455666666542 279999999998876653
No 353
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=78.22 E-value=3.2 Score=43.60 Aligned_cols=44 Identities=16% Similarity=0.034 Sum_probs=35.1
Q ss_pred CCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHH
Q 021397 111 GDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLL 155 (313)
Q Consensus 111 g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~ 155 (313)
.-+++|++||.||.+.-+.+. +-.-.|.|+|+++..++..+.|.
T Consensus 540 ~l~~iDLFaG~GGlslGl~~A-G~~~vv~avEid~~A~~ty~~N~ 583 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQA-GISDTLWAIEMWDPAAQAFRLNN 583 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHH-TSEEEEEEECSSHHHHHHHHHHC
T ss_pred CCeEEEeccCccHHHHHHHHC-CCCceEEEEECCHHHHHHHHHhC
Confidence 348999999999999988764 21125889999999999888773
No 354
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=77.65 E-value=3.3 Score=37.16 Aligned_cols=52 Identities=17% Similarity=0.148 Sum_probs=38.0
Q ss_pred HhcCCCCCCEEEEECC--CcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q 021397 104 SALNISAGDHVLDLCA--APGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYAL 160 (313)
Q Consensus 104 ~~l~~~~g~~VLDlca--gpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~ 160 (313)
....+++|++||-.|| |-|..+.++++..+ .+|+++|.++++++.+. +++|.
T Consensus 143 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~---~~~g~ 196 (336)
T 4b7c_A 143 DVGQPKNGETVVISGAAGAVGSVAGQIARLKG--CRVVGIAGGAEKCRFLV---EELGF 196 (336)
T ss_dssp HTTCCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHH---HTTCC
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH---HHcCC
Confidence 4457899999999987 34555666666654 58999999999887763 33565
No 355
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=77.62 E-value=3.9 Score=36.60 Aligned_cols=46 Identities=17% Similarity=0.339 Sum_probs=35.1
Q ss_pred cCCCCCCEEEEECC--CcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHH
Q 021397 106 LNISAGDHVLDLCA--APGAKLCMILDIIGDSGSVTGVDVARHRLAACRT 153 (313)
Q Consensus 106 l~~~~g~~VLDlca--gpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~ 153 (313)
..+++|++||=.|+ |-|..+.++++..+ .+|+++|.++++++.+++
T Consensus 136 ~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~ 183 (325)
T 3jyn_A 136 YQVKPGEIILFHAAAGGVGSLACQWAKALG--AKLIGTVSSPEKAAHAKA 183 (325)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEESSHHHHHHHHH
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 46889999998873 33555666777665 589999999999887763
No 356
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=77.35 E-value=4.4 Score=36.29 Aligned_cols=45 Identities=24% Similarity=0.320 Sum_probs=32.8
Q ss_pred hcCCCCCCEEEEECC--CcChHHHHHHHHhCCCcEEEEEcCCHHHHHHH
Q 021397 105 ALNISAGDHVLDLCA--APGAKLCMILDIIGDSGSVTGVDVARHRLAAC 151 (313)
Q Consensus 105 ~l~~~~g~~VLDlca--gpG~kt~~la~~~~~~~~V~avD~s~~~l~~~ 151 (313)
..++++|++||-.|| |-|..+.+++...+ .+|+++|.++++++.+
T Consensus 140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G--~~V~~~~~~~~~~~~~ 186 (333)
T 1v3u_A 140 VCGVKGGETVLVSAAAGAVGSVVGQIAKLKG--CKVVGAAGSDEKIAYL 186 (333)
T ss_dssp TSCCCSSCEEEEESTTBHHHHHHHHHHHHTT--CEEEEEESSHHHHHHH
T ss_pred hhCCCCCCEEEEecCCCcHHHHHHHHHHHCC--CEEEEEeCCHHHHHHH
Confidence 357889999999997 33444445555443 5899999999888766
No 357
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=77.31 E-value=4.6 Score=36.72 Aligned_cols=51 Identities=14% Similarity=0.077 Sum_probs=36.7
Q ss_pred cCCC-CCCEEEEECCCc-ChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCC
Q 021397 106 LNIS-AGDHVLDLCAAP-GAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALG 161 (313)
Q Consensus 106 l~~~-~g~~VLDlcagp-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~ 161 (313)
..++ +|++||=.|+|+ |..+.++|+.++ .+|+++|.++++++.+++ ++|..
T Consensus 175 ~~~~~~g~~VlV~GaG~vG~~a~qlak~~G--a~Vi~~~~~~~~~~~~~~---~lGa~ 227 (357)
T 2cf5_A 175 FGLKQPGLRGGILGLGGVGHMGVKIAKAMG--HHVTVISSSNKKREEALQ---DLGAD 227 (357)
T ss_dssp TSTTSTTCEEEEECCSHHHHHHHHHHHHHT--CEEEEEESSTTHHHHHHT---TSCCS
T ss_pred cCCCCCCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHH---HcCCc
Confidence 4677 999999998754 344556666665 589999999988876652 46653
No 358
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=76.47 E-value=3.8 Score=36.90 Aligned_cols=46 Identities=17% Similarity=0.252 Sum_probs=34.6
Q ss_pred hcCCCCCCEEEEECC--CcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHH
Q 021397 105 ALNISAGDHVLDLCA--APGAKLCMILDIIGDSGSVTGVDVARHRLAACR 152 (313)
Q Consensus 105 ~l~~~~g~~VLDlca--gpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~ 152 (313)
..++++|++||-.|| |-|..+.+++...+ .+|+++|.++.+++.++
T Consensus 150 ~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G--~~V~~~~~~~~~~~~~~ 197 (345)
T 2j3h_A 150 VCSPKEGETVYVSAASGAVGQLVGQLAKMMG--CYVVGSAGSKEKVDLLK 197 (345)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHH
T ss_pred HhCCCCCCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH
Confidence 457889999999997 34445556666554 58999999999887765
No 359
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=76.24 E-value=4.5 Score=36.94 Aligned_cols=51 Identities=16% Similarity=0.102 Sum_probs=37.6
Q ss_pred hcCCC-----CCCEEEEEC-CCc-ChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q 021397 105 ALNIS-----AGDHVLDLC-AAP-GAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYAL 160 (313)
Q Consensus 105 ~l~~~-----~g~~VLDlc-agp-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~ 160 (313)
..+++ +|++||=.| +|+ |..+.++|+.+++ .+|+++|.++++++.++ ++|.
T Consensus 161 ~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g-~~Vi~~~~~~~~~~~~~----~lGa 218 (363)
T 4dvj_A 161 RLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTD-LTVIATASRPETQEWVK----SLGA 218 (363)
T ss_dssp TSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCC-SEEEEECSSHHHHHHHH----HTTC
T ss_pred hhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHHH----HcCC
Confidence 34566 789999887 443 6667777776543 69999999999988775 4675
No 360
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=75.79 E-value=6.1 Score=35.98 Aligned_cols=50 Identities=18% Similarity=0.122 Sum_probs=37.7
Q ss_pred hcCCCCCCEEEEECC--CcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q 021397 105 ALNISAGDHVLDLCA--APGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYAL 160 (313)
Q Consensus 105 ~l~~~~g~~VLDlca--gpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~ 160 (313)
..++++|++||=.|+ |-|..+.++++..+ .+|+++|.++++++.+++ +|.
T Consensus 158 ~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~G--a~Vi~~~~~~~~~~~~~~----~Ga 209 (362)
T 2c0c_A 158 LGGLSEGKKVLVTAAAGGTGQFAMQLSKKAK--CHVIGTCSSDEKSAFLKS----LGC 209 (362)
T ss_dssp HTCCCTTCEEEETTTTBTTHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH----TTC
T ss_pred hcCCCCCCEEEEeCCCcHHHHHHHHHHHhCC--CEEEEEECCHHHHHHHHH----cCC
Confidence 457889999999983 34555667777654 589999999998877653 565
No 361
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=74.59 E-value=4.8 Score=36.08 Aligned_cols=46 Identities=24% Similarity=0.367 Sum_probs=34.2
Q ss_pred cCCCCCCEEEEECC--CcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHH
Q 021397 106 LNISAGDHVLDLCA--APGAKLCMILDIIGDSGSVTGVDVARHRLAACRT 153 (313)
Q Consensus 106 l~~~~g~~VLDlca--gpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~ 153 (313)
..+++|++||=.|+ |-|..+.++++..+ .+|+++|.++++++.+++
T Consensus 144 ~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~ 191 (334)
T 3qwb_A 144 YHVKKGDYVLLFAAAGGVGLILNQLLKMKG--AHTIAVASTDEKLKIAKE 191 (334)
T ss_dssp SCCCTTCEEEESSTTBHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 46889999999984 33445566666654 589999999999886653
No 362
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=73.32 E-value=4.2 Score=36.73 Aligned_cols=47 Identities=23% Similarity=0.204 Sum_probs=36.2
Q ss_pred hcCCCCCCEEEEECC--CcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHH
Q 021397 105 ALNISAGDHVLDLCA--APGAKLCMILDIIGDSGSVTGVDVARHRLAACRT 153 (313)
Q Consensus 105 ~l~~~~g~~VLDlca--gpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~ 153 (313)
...+++|++||=.|| |-|..+.++++..+ .+|++++.++++++.+++
T Consensus 154 ~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~ 202 (342)
T 4eye_A 154 RGQLRAGETVLVLGAAGGIGTAAIQIAKGMG--AKVIAVVNRTAATEFVKS 202 (342)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSGGGHHHHHH
T ss_pred hcCCCCCCEEEEECCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh
Confidence 356789999998887 33566667777664 589999999998877664
No 363
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=73.20 E-value=3.7 Score=31.88 Aligned_cols=54 Identities=13% Similarity=0.167 Sum_probs=37.4
Q ss_pred CEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 021397 112 DHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 112 ~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d 175 (313)
++|+=+|+ |..+..+++.+. .+..|+++|.++++++.+++ .| +.++.+|+...+
T Consensus 8 ~~viIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~g----~~~i~gd~~~~~ 62 (140)
T 3fwz_A 8 NHALLVGY--GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----RG----VRAVLGNAANEE 62 (140)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TT----CEEEESCTTSHH
T ss_pred CCEEEECc--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----cC----CCEEECCCCCHH
Confidence 45666665 667777776653 23579999999999887663 33 467889986543
No 364
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=72.83 E-value=7 Score=35.62 Aligned_cols=51 Identities=12% Similarity=0.199 Sum_probs=35.7
Q ss_pred hcCCC-CCCEEEEECCCc-ChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q 021397 105 ALNIS-AGDHVLDLCAAP-GAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYAL 160 (313)
Q Consensus 105 ~l~~~-~g~~VLDlcagp-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~ 160 (313)
...++ +|++||=.|+|+ |..+.++++.++ .+|+++|.++.+++.++ +++|.
T Consensus 181 ~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~G--a~Vi~~~~~~~~~~~~~---~~lGa 233 (366)
T 1yqd_A 181 YFGLDEPGKHIGIVGLGGLGHVAVKFAKAFG--SKVTVISTSPSKKEEAL---KNFGA 233 (366)
T ss_dssp HTTCCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCGGGHHHHH---HTSCC
T ss_pred hcCcCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH---HhcCC
Confidence 34677 999999998644 334455566554 58999999998887655 24565
No 365
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=72.81 E-value=7 Score=33.72 Aligned_cols=63 Identities=8% Similarity=0.025 Sum_probs=48.0
Q ss_pred CCCEEEEECCCcC-hHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 021397 110 AGDHVLDLCAAPG-AKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT 173 (313)
Q Consensus 110 ~g~~VLDlcagpG-~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~ 173 (313)
.|..+|=-|++.+ |.+..+|+.+. .+.+|+.+|.++..++.+.+.+++.+-. ++.++..|.++
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~ 69 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQP-EAHLYQIDVQS 69 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCS-SCEEEECCTTC
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC-cEEEEEccCCC
Confidence 4788888888654 66666666542 3468999999999999988888777643 68889999865
No 366
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=72.75 E-value=6 Score=30.41 Aligned_cols=54 Identities=13% Similarity=0.078 Sum_probs=38.1
Q ss_pred CCEEEEECCCcChHHHHHHHHhCC-CcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 111 GDHVLDLCAAPGAKLCMILDIIGD-SGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 111 g~~VLDlcagpG~kt~~la~~~~~-~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
+.+|+=+|+ |..+..+++.+.. +..|+++|.++++++.+++ .+ +.++.+|....
T Consensus 6 ~~~v~I~G~--G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~~----~~~~~gd~~~~ 60 (141)
T 3llv_A 6 RYEYIVIGS--EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----EG----FDAVIADPTDE 60 (141)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TT----CEEEECCTTCH
T ss_pred CCEEEEECC--CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----CC----CcEEECCCCCH
Confidence 456887887 5677777776532 3579999999998877653 23 46778887653
No 367
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=71.97 E-value=9.1 Score=34.47 Aligned_cols=47 Identities=19% Similarity=0.203 Sum_probs=34.3
Q ss_pred hcCCC------CCCEEEEEC-CCc-ChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHH
Q 021397 105 ALNIS------AGDHVLDLC-AAP-GAKLCMILDIIGDSGSVTGVDVARHRLAACRT 153 (313)
Q Consensus 105 ~l~~~------~g~~VLDlc-agp-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~ 153 (313)
...++ +|++||=.| +|+ |..+.++++..+ .+|+++|.++++++.+++
T Consensus 139 ~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~ 193 (346)
T 3fbg_A 139 VFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYG--LRVITTASRNETIEWTKK 193 (346)
T ss_dssp TSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTT--CEEEEECCSHHHHHHHHH
T ss_pred hcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh
Confidence 35566 899999884 333 455666676654 589999999999887764
No 368
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=71.72 E-value=4.2 Score=35.94 Aligned_cols=47 Identities=21% Similarity=0.192 Sum_probs=36.0
Q ss_pred CCCCCEEEEECC--CcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q 021397 108 ISAGDHVLDLCA--APGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYAL 160 (313)
Q Consensus 108 ~~~g~~VLDlca--gpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~ 160 (313)
+++|++||-.|+ |-|..+.++++..+ .+|+++|.++.+++.++ ++|.
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~----~~ga 171 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMG--LRVLAAASRPEKLALPL----ALGA 171 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTT--CEEEEEESSGGGSHHHH----HTTC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH----hcCC
Confidence 889999999997 33555667777654 58999999999887764 3565
No 369
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=71.61 E-value=7.4 Score=35.28 Aligned_cols=50 Identities=20% Similarity=0.213 Sum_probs=35.6
Q ss_pred hcCCCCCCEEEEECC--CcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q 021397 105 ALNISAGDHVLDLCA--APGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYAL 160 (313)
Q Consensus 105 ~l~~~~g~~VLDlca--gpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~ 160 (313)
..++++|++||-.|+ |-|..+.+++...+ .+|+++|.++++++.++ ++|.
T Consensus 165 ~~~~~~g~~vlV~GasggiG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~----~~ga 216 (351)
T 1yb5_A 165 SACVKAGESVLVHGASGGVGLAACQIARAYG--LKILGTAGTEEGQKIVL----QNGA 216 (351)
T ss_dssp TSCCCTTCEEEEETCSSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHH----HTTC
T ss_pred hhCCCCcCEEEEECCCChHHHHHHHHHHHCC--CEEEEEeCChhHHHHHH----HcCC
Confidence 356889999999997 33444555565544 58999999999887553 4564
No 370
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=69.91 E-value=23 Score=30.28 Aligned_cols=62 Identities=13% Similarity=-0.027 Sum_probs=47.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHh-CCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDII-GDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~-~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.|..+|=.|++. +.+..+++.+ ..+.+|+.+|.++..++.+.+.+...+. ++.++..|.++.
T Consensus 10 ~~k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~ 72 (264)
T 3ucx_A 10 TDKVVVISGVGP-ALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGR--RALSVGTDITDD 72 (264)
T ss_dssp TTCEEEEESCCT-THHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCH
T ss_pred CCcEEEEECCCc-HHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEcCCCCH
Confidence 577888777654 5666666654 2345899999999999998888887764 688999998753
No 371
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=69.63 E-value=16 Score=30.88 Aligned_cols=62 Identities=19% Similarity=-0.028 Sum_probs=46.6
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC--CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG--DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~--~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.+.+||=.| |+|+.+.++++.+. .+..|+.++.+...++.+.+.++..+. ++.++..|..+.
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dl~~~ 66 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGL--SPRFHQLDIDDL 66 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTC--CCEEEECCTTCH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCC--eeEEEECCCCCH
Confidence 356777444 67888888887653 246899999999988888877776653 688899998754
No 372
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=69.41 E-value=5.9 Score=42.85 Aligned_cols=44 Identities=16% Similarity=0.027 Sum_probs=35.1
Q ss_pred CCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHH
Q 021397 111 GDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLL 155 (313)
Q Consensus 111 g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~ 155 (313)
..+++|++||.||.+.-+.+. +-.-.|.|+|+++.+++..+.|.
T Consensus 851 ~l~viDLFsG~GGlslGfe~A-G~~~vv~avEid~~A~~ty~~N~ 894 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQA-GISETLWAIEMWDPAAQAFRLNN 894 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHT-TSEEEEEEECCSHHHHHHHHHHC
T ss_pred CceEEecccCccHHHHHHHHC-CCCceEEEEECCHHHHHHHHHhC
Confidence 458999999999999988653 21125889999999999888773
No 373
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=69.29 E-value=9.8 Score=33.96 Aligned_cols=47 Identities=21% Similarity=0.279 Sum_probs=34.6
Q ss_pred hcCCCCCCEEEEECC--CcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHH
Q 021397 105 ALNISAGDHVLDLCA--APGAKLCMILDIIGDSGSVTGVDVARHRLAACRT 153 (313)
Q Consensus 105 ~l~~~~g~~VLDlca--gpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~ 153 (313)
..++++|++||=.|+ |-|..+.+++...+ .+|+++|.++++++.+++
T Consensus 140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G--~~Vi~~~~~~~~~~~~~~ 188 (333)
T 1wly_A 140 THKVKPGDYVLIHAAAGGMGHIMVPWARHLG--ATVIGTVSTEEKAETARK 188 (333)
T ss_dssp TSCCCTTCEEEETTTTSTTHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH
T ss_pred hhCCCCCCEEEEECCccHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 346889999999885 34445556666554 589999999988887754
No 374
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=69.21 E-value=7.6 Score=35.31 Aligned_cols=46 Identities=13% Similarity=0.156 Sum_probs=32.6
Q ss_pred hcCCC--C-------CCEEEEECCCc-ChHHHHHHHHhCCCcEEEEEcCCH---HHHHHHH
Q 021397 105 ALNIS--A-------GDHVLDLCAAP-GAKLCMILDIIGDSGSVTGVDVAR---HRLAACR 152 (313)
Q Consensus 105 ~l~~~--~-------g~~VLDlcagp-G~kt~~la~~~~~~~~V~avD~s~---~~l~~~~ 152 (313)
..+++ + |++||=.|+|+ |..+.++++..+ .+|+++|.++ ++++.++
T Consensus 166 ~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~G--a~Vi~~~~~~~~~~~~~~~~ 224 (366)
T 2cdc_A 166 QKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYG--LEVWMANRREPTEVEQTVIE 224 (366)
T ss_dssp GGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHHHHHHHT--CEEEEEESSCCCHHHHHHHH
T ss_pred ccCccccccccccCCCCEEEEECCCHHHHHHHHHHHhCC--CEEEEEeCCccchHHHHHHH
Confidence 45677 8 99999999833 333445555554 4899999998 7776654
No 375
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=68.75 E-value=21 Score=30.68 Aligned_cols=64 Identities=9% Similarity=-0.039 Sum_probs=47.9
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.+..||=.|+ +|+.+..+++.+. .+..|++++.++..++.+.+.++..+...++.++.+|..+.
T Consensus 31 ~~k~vlVTGa-sggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~ 95 (279)
T 1xg5_A 31 RDRLALVTGA-SGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNE 95 (279)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCH
Confidence 4667886664 5788887777652 33589999999999888888777776544688889998754
No 376
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=68.51 E-value=14 Score=31.60 Aligned_cols=62 Identities=13% Similarity=-0.063 Sum_probs=47.6
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.|..||=.|++ ||.+..+++.+. .+.+|+.+|.++..++.+.+.++..+. ++.++..|.++.
T Consensus 6 ~~k~vlVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~ 68 (252)
T 3h7a_A 6 RNATVAVIGAG-DYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGG--RIVARSLDARNE 68 (252)
T ss_dssp CSCEEEEECCS-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTC--EEEEEECCTTCH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--eEEEEECcCCCH
Confidence 46677777765 667777776552 345899999999999999888887764 789999998754
No 377
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=68.40 E-value=19 Score=32.44 Aligned_cols=33 Identities=15% Similarity=0.160 Sum_probs=21.6
Q ss_pred CCEEEEECCCcChHHHHHHH---HhCCCcE--EEEEcC
Q 021397 111 GDHVLDLCAAPGAKLCMILD---IIGDSGS--VTGVDV 143 (313)
Q Consensus 111 g~~VLDlcagpG~kt~~la~---~~~~~~~--V~avD~ 143 (313)
.-+|||+|=|+|..++...+ ..+...+ .+++|.
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek 134 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEK 134 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEES
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecH
Confidence 34799999999997654432 2333344 577775
No 378
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=68.28 E-value=20 Score=31.78 Aligned_cols=64 Identities=13% Similarity=0.052 Sum_probs=48.7
Q ss_pred CCCEEEEECCCcChHHHHHHHHh-CCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDII-GDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~-~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.|.+||=.|++ |+.+.++++.+ ..+..|++++.++..++.+.+.++..+...++.++..|.++.
T Consensus 7 ~~k~vlVTGas-~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~ 71 (319)
T 3ioy_A 7 AGRTAFVTGGA-NGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASR 71 (319)
T ss_dssp TTCEEEEETTT-STHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCH
T ss_pred CCCEEEEcCCc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCH
Confidence 46788877766 67777777765 234589999999999999888887766434688999998753
No 379
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=67.62 E-value=7.1 Score=35.35 Aligned_cols=46 Identities=17% Similarity=0.272 Sum_probs=33.9
Q ss_pred cCCCCCCEEEEECC-C-cChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHH
Q 021397 106 LNISAGDHVLDLCA-A-PGAKLCMILDIIGDSGSVTGVDVARHRLAACRT 153 (313)
Q Consensus 106 l~~~~g~~VLDlca-g-pG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~ 153 (313)
..+++|++||=.|+ | -|..+.++++..+ .+|+++|.++++++.+++
T Consensus 163 ~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~ 210 (353)
T 4dup_A 163 AGLTEGESVLIHGGTSGIGTTAIQLARAFG--AEVYATAGSTGKCEACER 210 (353)
T ss_dssp TCCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH
T ss_pred cCCCCCCEEEEEcCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh
Confidence 46789999998743 2 3455566666654 589999999999887764
No 380
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=67.60 E-value=22 Score=29.92 Aligned_cols=62 Identities=8% Similarity=-0.037 Sum_probs=47.5
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.+..||=.|+ +|+.+.++++.+. .+..|+.+|.++..++.+.+.++..+. ++.++..|.++.
T Consensus 8 ~~k~vlITGa-s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~ 70 (253)
T 3qiv_A 8 ENKVGIVTGS-GGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGG--TAISVAVDVSDP 70 (253)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--EEEEEECCTTSH
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC--cEEEEEccCCCH
Confidence 4677887775 5677777777653 345899999999999998888877664 688999998753
No 381
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=67.47 E-value=8.2 Score=36.72 Aligned_cols=56 Identities=16% Similarity=0.149 Sum_probs=40.8
Q ss_pred CCEEEEECCCcChHHHHHHHHhCCC-cEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 021397 111 GDHVLDLCAAPGAKLCMILDIIGDS-GSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 111 g~~VLDlcagpG~kt~~la~~~~~~-~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d 175 (313)
.++|+=+| -|..+..+|+.+... ..|+.+|.++++++.+.+. + .+.++.+|++..+
T Consensus 3 ~M~iiI~G--~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~---~----~~~~i~Gd~~~~~ 59 (461)
T 4g65_A 3 AMKIIILG--AGQVGGTLAENLVGENNDITIVDKDGDRLRELQDK---Y----DLRVVNGHASHPD 59 (461)
T ss_dssp CEEEEEEC--CSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHH---S----SCEEEESCTTCHH
T ss_pred cCEEEEEC--CCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHh---c----CcEEEEEcCCCHH
Confidence 35666544 567888899887543 4699999999999887654 3 2568899997543
No 382
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=67.16 E-value=8.8 Score=34.16 Aligned_cols=47 Identities=17% Similarity=0.243 Sum_probs=33.9
Q ss_pred hcCCCCCCEEEEECCC--cChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHH
Q 021397 105 ALNISAGDHVLDLCAA--PGAKLCMILDIIGDSGSVTGVDVARHRLAACRT 153 (313)
Q Consensus 105 ~l~~~~g~~VLDlcag--pG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~ 153 (313)
..++++|++||-.|++ -|..+.+++...+ .+|+++|.++++++.+++
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G--~~V~~~~~~~~~~~~~~~ 183 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLIACQWAKALG--AKLIGTVGTAQKAQSALK 183 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHHT--CEEEEEESSHHHHHHHHH
T ss_pred hhCCCCCCEEEEECCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH
Confidence 3468899999999842 3344455555554 589999999998887764
No 383
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=66.97 E-value=20 Score=31.31 Aligned_cols=32 Identities=13% Similarity=0.206 Sum_probs=25.5
Q ss_pred CCEEEEECCCcChHHHHHHHHh------CCCcEEEEEc
Q 021397 111 GDHVLDLCAAPGAKLCMILDII------GDSGSVTGVD 142 (313)
Q Consensus 111 g~~VLDlcagpG~kt~~la~~~------~~~~~V~avD 142 (313)
...|+++|+..|+.+..++... +...+|++.|
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fD 107 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFD 107 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEE
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEE
Confidence 3489999999999999887642 2346899999
No 384
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=66.60 E-value=22 Score=31.18 Aligned_cols=64 Identities=13% Similarity=0.013 Sum_probs=49.3
Q ss_pred CCCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 021397 109 SAGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 109 ~~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d 175 (313)
-.|..||=.|++ |+.+..+++.+. .+..|+.+|.++..++.+.+.++..+. ++.++..|.++.+
T Consensus 29 l~gk~vlVTGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dv~d~~ 93 (301)
T 3tjr_A 29 FDGRAAVVTGGA-SGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGF--DAHGVVCDVRHLD 93 (301)
T ss_dssp STTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCHH
T ss_pred cCCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEEccCCCHH
Confidence 357788877766 677777776652 345899999999999998888887765 6889999987543
No 385
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=65.76 E-value=18 Score=26.15 Aligned_cols=54 Identities=22% Similarity=0.071 Sum_probs=37.0
Q ss_pred CCCEEEEECCCcChHHHHHHHHhCCC--cEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIGDS--GSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT 173 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~~~--~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~ 173 (313)
.+.+|+=+|+ |+.+..+++.+... ..|+++|.++.+++.+. .. .+.++..|...
T Consensus 4 ~~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~~----~~~~~~~d~~~ 59 (118)
T 3ic5_A 4 MRWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----RM----GVATKQVDAKD 59 (118)
T ss_dssp TCEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----TT----TCEEEECCTTC
T ss_pred CcCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----hC----CCcEEEecCCC
Confidence 3567888887 77777776655322 47999999998887655 12 35667777654
No 386
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=65.58 E-value=8.9 Score=33.82 Aligned_cols=63 Identities=11% Similarity=-0.021 Sum_probs=46.0
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.|.+||=.|+ +|+.+..+++.+- .+..|+.+|.++..++.+.+.++..+. .++.++..|.++.
T Consensus 40 ~~k~vlVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~d~ 103 (293)
T 3rih_A 40 SARSVLVTGG-TKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGA-GNVIGVRLDVSDP 103 (293)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSS-SCEEEEECCTTCH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCC-CcEEEEEEeCCCH
Confidence 3567775554 5677777777652 345899999999998888877766653 2688999998753
No 387
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=65.48 E-value=13 Score=32.44 Aligned_cols=61 Identities=16% Similarity=0.041 Sum_probs=47.3
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT 173 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~ 173 (313)
.|..+|=-|++ +|.+..+++.+. .+.+|+.+|++++.++.+.+.+++.|. ++..+..|.++
T Consensus 8 ~gKvalVTGas-~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~--~~~~~~~Dv~~ 69 (255)
T 4g81_D 8 TGKTALVTGSA-RGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGY--DAHGVAFDVTD 69 (255)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC--CEEECCCCTTC
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEEeeCCC
Confidence 47777766655 567777776653 346899999999999999888888875 68889999865
No 388
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=64.85 E-value=25 Score=29.94 Aligned_cols=62 Identities=13% Similarity=-0.007 Sum_probs=48.0
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.|..||=.|+ +|+.+.++++.+. .+..|+.++.++..++.+.+.+...+. ++.++..|....
T Consensus 28 ~~k~vlITGa-s~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~ 90 (262)
T 3rkr_A 28 SGQVAVVTGA-SRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGG--EAESHACDLSHS 90 (262)
T ss_dssp TTCEEEESST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--EEEEEECCTTCH
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCC--ceeEEEecCCCH
Confidence 4677886665 5778888877652 345899999999999998888887764 689999998754
No 389
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=64.29 E-value=29 Score=29.19 Aligned_cols=62 Identities=10% Similarity=-0.066 Sum_probs=46.4
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.+.+||=.|+ +|+.+.++++.+. .+.+|+++|.++..++.+.+.++..+. ++.++..|..+.
T Consensus 12 ~~k~vlItGa-sggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~ 74 (260)
T 3awd_A 12 DNRVAIVTGG-AQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGH--DVSSVVMDVTNT 74 (260)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCH
T ss_pred CCCEEEEeCC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--ceEEEEecCCCH
Confidence 4677886665 5788888877653 345899999999888877777766654 688999998753
No 390
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=64.18 E-value=18 Score=31.68 Aligned_cols=65 Identities=11% Similarity=-0.096 Sum_probs=47.4
Q ss_pred CCCEEEEECCCcChHHHHHHHHhCCC----cEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIGDS----GSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~~~----~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d 175 (313)
.|..||=.|++ ||.+..+++.+-.. ..|+.++.+...++.+.+.++......++.++..|.++.+
T Consensus 32 ~~k~~lVTGas-~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~ 100 (287)
T 3rku_A 32 AKKTVLITGAS-AGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAE 100 (287)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGG
T ss_pred CCCEEEEecCC-ChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHH
Confidence 46788877765 67777777655211 2899999999999988888776532237889999987644
No 391
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=63.22 E-value=9.9 Score=34.38 Aligned_cols=45 Identities=20% Similarity=0.203 Sum_probs=32.4
Q ss_pred cCCCCCCEEEEECC--CcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHH
Q 021397 106 LNISAGDHVLDLCA--APGAKLCMILDIIGDSGSVTGVDVARHRLAACR 152 (313)
Q Consensus 106 l~~~~g~~VLDlca--gpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~ 152 (313)
.++++|++||-.|+ |-|..+.+++...+ .+|+++|.++++++.++
T Consensus 158 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~ 204 (354)
T 2j8z_A 158 GNVQAGDYVLIHAGLSGVGTAAIQLTRMAG--AIPLVTAGSQKKLQMAE 204 (354)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHH
T ss_pred cCCCCCCEEEEECCccHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHH
Confidence 46789999998874 23344445555543 58999999999988774
No 392
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=63.15 E-value=6.4 Score=35.82 Aligned_cols=89 Identities=12% Similarity=0.127 Sum_probs=56.6
Q ss_pred cccccCCeEEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcC----
Q 021397 84 SMAYKQGKIYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYA---- 159 (313)
Q Consensus 84 ~~~~~~G~~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g---- 159 (313)
.|....|++.....--.++..++.-.+...|+.+|||.......+....+ ...++-+|. +..++.-++.+.+.+
T Consensus 71 ~P~in~g~~~Rt~~iD~~v~~fl~~~~~~qVV~LGaGlDTr~~RL~~~~~-~~~~~EvD~-P~vi~~K~~~l~~~~~l~~ 148 (334)
T 1rjd_A 71 FPVMNYGTYLRTVGIDAAILEFLVANEKVQVVNLGCGSDLRMLPLLQMFP-HLAYVDIDY-NESVELKNSILRESEILRI 148 (334)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHCSSEEEEEETCTTCCTHHHHHHHCT-TEEEEEEEC-HHHHHHHHHHHHHSHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCCCCccHHHHhcCcCC-CCEEEECCC-HHHHHHHHHHhhhccchhh
Confidence 45555555433222223333344224557899999999999999887633 357778887 777766666666542
Q ss_pred ----------------CCCcEEEEecCCCCC
Q 021397 160 ----------------LGDRCRLFVADGTTF 174 (313)
Q Consensus 160 ----------------~~~~v~~~~~D~~~~ 174 (313)
..++..++..|.+..
T Consensus 149 ~l~~~~~~~~~~~~~~~~~~~~~v~~DL~d~ 179 (334)
T 1rjd_A 149 SLGLSKEDTAKSPFLIDQGRYKLAACDLNDI 179 (334)
T ss_dssp HHTCCSSCCCCTTEEEECSSEEEEECCTTCH
T ss_pred hcccccccccccccccCCCceEEEecCCCCc
Confidence 124688888888764
No 393
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=62.97 E-value=26 Score=29.35 Aligned_cols=61 Identities=10% Similarity=0.100 Sum_probs=46.7
Q ss_pred CCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 111 GDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 111 g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
+.+||=.| |+|+.+.++++.+. .+.+|+.++.++..++.+.+.++..+. ++.++..|.++.
T Consensus 5 ~k~vlITG-as~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~ 66 (247)
T 3lyl_A 5 EKVALVTG-ASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGF--KARGLVLNISDI 66 (247)
T ss_dssp TCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC--CEEEEECCTTCH
T ss_pred CCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--ceEEEEecCCCH
Confidence 56677666 55777777777653 345899999999999998888888775 689999998753
No 394
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=62.12 E-value=29 Score=29.49 Aligned_cols=63 Identities=25% Similarity=0.186 Sum_probs=45.3
Q ss_pred CCCEEEEECCC-cChHHHHHHHHh-CCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAA-PGAKLCMILDII-GDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcag-pG~kt~~la~~~-~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.|.+||=.|++ . |.+.++++.+ ..+..|+.+|.+...++.+.+.++..+- .++.++..|.++.
T Consensus 21 ~~k~vlITGasg~-GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~ 85 (266)
T 3o38_A 21 KGKVVLVTAAAGT-GIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGL-GRVEAVVCDVTST 85 (266)
T ss_dssp TTCEEEESSCSSS-SHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCS-SCEEEEECCTTCH
T ss_pred CCCEEEEECCCCC-chHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCC-CceEEEEeCCCCH
Confidence 46778877763 3 4555565543 3346899999999999888888766653 3799999998753
No 395
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=61.88 E-value=22 Score=30.11 Aligned_cols=63 Identities=11% Similarity=-0.128 Sum_probs=45.0
Q ss_pred CCEEEEECCCcChHHHHHHHHhC----CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 111 GDHVLDLCAAPGAKLCMILDIIG----DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 111 g~~VLDlcagpG~kt~~la~~~~----~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
+..+|=.| |+|+.+..+++.+. .+.+|+.+|.++..++.+.+.++......++.++..|.++.
T Consensus 6 ~k~~lVTG-as~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~ 72 (259)
T 1oaa_A 6 CAVCVLTG-ASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTE 72 (259)
T ss_dssp SEEEEESS-CSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSH
T ss_pred CcEEEEeC-CCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCH
Confidence 45566555 55788888887664 35689999999999888877776542123688899998753
No 396
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=61.71 E-value=33 Score=29.33 Aligned_cols=62 Identities=16% Similarity=0.090 Sum_probs=46.8
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.+.+||=.|+ +|+.+..+++.+. .+..|+++|.++..++.+.+.++..+. ++.++..|..+.
T Consensus 30 ~~k~vlITGa-sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dl~~~ 92 (272)
T 1yb1_A 30 TGEIVLITGA-GHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGA--KVHTFVVDCSNR 92 (272)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCC--eEEEEEeeCCCH
Confidence 3667886664 5788888877652 345899999999988888877777664 688999998753
No 397
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=61.65 E-value=26 Score=30.15 Aligned_cols=61 Identities=16% Similarity=-0.041 Sum_probs=46.1
Q ss_pred CCEEEEECCCcChHHHHHHHHh-CCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 111 GDHVLDLCAAPGAKLCMILDII-GDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 111 g~~VLDlcagpG~kt~~la~~~-~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
+.++|=.|++ ||.+..+++.+ ..+..|+.+|.++..++.+.+.++..+. ++.++..|.++.
T Consensus 4 ~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dv~d~ 65 (264)
T 3tfo_A 4 DKVILITGAS-GGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGG--TALAQVLDVTDR 65 (264)
T ss_dssp TCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC--EEEEEECCTTCH
T ss_pred CCEEEEeCCc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEEcCCCCH
Confidence 5567766655 67777777765 2346899999999999998888877764 688899998753
No 398
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=61.44 E-value=34 Score=29.00 Aligned_cols=62 Identities=16% Similarity=0.100 Sum_probs=45.9
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.|.+||=.|+ +|+.+.++++.+. .+..|+++|.++..++.+.+.++..+. ++.++..|.++.
T Consensus 8 ~~k~vlVTGa-s~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~ 70 (260)
T 2ae2_A 8 EGCTALVTGG-SRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGF--KVEASVCDLSSR 70 (260)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--EEEEEECCTTCH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEcCCCCH
Confidence 4677886665 5777777776552 345899999999988887777766653 688899998753
No 399
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=61.18 E-value=29 Score=30.02 Aligned_cols=64 Identities=13% Similarity=0.000 Sum_probs=46.7
Q ss_pred CCCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcC-CHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 021397 109 SAGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDV-ARHRLAACRTLLQKYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 109 ~~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~-s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d 175 (313)
..+..+|=.|++ |+.+.++++.+. .+..|+.+|. ++..++.+.+.++..+. ++.++..|.++.+
T Consensus 27 ~~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~ 92 (280)
T 4da9_A 27 KARPVAIVTGGR-RGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGA--RVIFLRADLADLS 92 (280)
T ss_dssp CCCCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTC--CEEEEECCTTSGG
T ss_pred cCCCEEEEecCC-CHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCC--cEEEEEecCCCHH
Confidence 356778877755 567777776552 3458999995 78888888877777764 6899999997654
No 400
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=61.08 E-value=37 Score=28.61 Aligned_cols=62 Identities=13% Similarity=0.019 Sum_probs=46.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.|..+|=.|++ |+.+..+++.+. .+..|+.++.++..++.+.+.++..+. ++.++..|..+.
T Consensus 6 ~~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dv~~~ 68 (247)
T 2jah_A 6 QGKVALITGAS-SGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGA--KVHVLELDVADR 68 (247)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEECCCCCH
Confidence 36678877754 677777777653 335899999999998888877776653 688899998653
No 401
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=60.94 E-value=35 Score=29.20 Aligned_cols=62 Identities=15% Similarity=0.094 Sum_probs=46.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.|..||=.|+ +|+.+.++++.+. .+.+|+++|.++..++.+.+.++..+. ++.++..|..+.
T Consensus 20 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~ 82 (273)
T 1ae1_A 20 KGTTALVTGG-SKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGL--NVEGSVCDLLSR 82 (273)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCH
T ss_pred CCCEEEEECC-cchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--ceEEEECCCCCH
Confidence 4677887775 5777777777653 335899999999988887777766654 688899998653
No 402
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=60.94 E-value=27 Score=30.21 Aligned_cols=62 Identities=10% Similarity=-0.049 Sum_probs=45.9
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.+..+|=.|++ |+.+.++++.+. .+..|+.++.++..++.+.+.++..+. ++.++..|.++.
T Consensus 23 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dv~d~ 85 (279)
T 3sju_A 23 RPQTAFVTGVS-SGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGH--DVDGSSCDVTST 85 (279)
T ss_dssp --CEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC--CEEEEECCTTCH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEECCCCCH
Confidence 46778877755 677777776552 346899999999999988888876664 688999998754
No 403
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=60.59 E-value=35 Score=29.33 Aligned_cols=62 Identities=13% Similarity=-0.010 Sum_probs=46.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.+..||=.|+ +|+.+..+++.+. .+..|++++.++..++.+.+.++..+. ++.++..|.++.
T Consensus 21 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dv~~~ 83 (277)
T 2rhc_B 21 DSEVALVTGA-TSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGV--EADGRTCDVRSV 83 (277)
T ss_dssp TSCEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--ceEEEECCCCCH
Confidence 4677887776 5677777777653 335899999999988887777776664 688899998653
No 404
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=60.36 E-value=9.3 Score=35.98 Aligned_cols=49 Identities=20% Similarity=0.200 Sum_probs=37.0
Q ss_pred cCCCCCCEEEEECC-C-cChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q 021397 106 LNISAGDHVLDLCA-A-PGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYAL 160 (313)
Q Consensus 106 l~~~~g~~VLDlca-g-pG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~ 160 (313)
.++++|++||=.|| | -|..+.++|+.++ .+|++++.++.+++.++ ++|.
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~G--a~vi~~~~~~~~~~~~~----~lGa 274 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGG--ANPICVVSSPQKAEICR----AMGA 274 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHH----HHTC
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcC--CeEEEEECCHHHHHHHH----hhCC
Confidence 46889999998886 3 3556667777664 58999999999988775 3565
No 405
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=60.11 E-value=29 Score=29.92 Aligned_cols=63 Identities=8% Similarity=-0.011 Sum_probs=46.7
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.|.+||=.| |+|+.+.++++.+. .+..|++++.++..++.+.+.++..+.. ++.++..|.++.
T Consensus 27 ~~k~vlITG-asggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~ 90 (286)
T 1xu9_A 27 QGKKVIVTG-ASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAA-SAHYIAGTMEDM 90 (286)
T ss_dssp TTCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCS-EEEEEECCTTCH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCC-ceEEEeCCCCCH
Confidence 367788666 55788888877552 3358999999999998887777766642 688899998753
No 406
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=60.08 E-value=25 Score=29.88 Aligned_cols=62 Identities=13% Similarity=-0.015 Sum_probs=46.4
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.|..+|=.|++ |+.+.++++.+. .+.+|+.+|.+...++.+.+.++..+. ++.++..|..+.
T Consensus 11 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~ 73 (256)
T 3gaf_A 11 NDAVAIVTGAA-AGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGG--KAIGLECNVTDE 73 (256)
T ss_dssp TTCEEEECSCS-SHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTC--CEEEEECCTTCH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEECCCCCH
Confidence 46677766654 677777776542 235899999999999988888887764 688999998753
No 407
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=60.01 E-value=38 Score=28.23 Aligned_cols=62 Identities=15% Similarity=-0.041 Sum_probs=46.3
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.+.+||=.| |+|+.+.++++.+. .+..|+++|.++..++.+.+.++..+. ++.++.+|..+.
T Consensus 10 ~~~~vlVtG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~ 72 (255)
T 1fmc_A 10 DGKCAIITG-AGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG--QAFACRCDITSE 72 (255)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCH
T ss_pred CCCEEEEEC-CccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCC--ceEEEEcCCCCH
Confidence 356777555 56888888887653 345899999999988887777776653 688889998653
No 408
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=59.49 E-value=22 Score=31.42 Aligned_cols=51 Identities=20% Similarity=0.195 Sum_probs=34.4
Q ss_pred HhcCCCCCCEEEEEC-CCc-ChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCC
Q 021397 104 SALNISAGDHVLDLC-AAP-GAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALG 161 (313)
Q Consensus 104 ~~l~~~~g~~VLDlc-agp-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~ 161 (313)
....+++|++||=.| +|+ |..+.++|+..+ .+|++++ +..+++. ++++|..
T Consensus 146 ~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~G--a~vi~~~-~~~~~~~----~~~lGa~ 198 (321)
T 3tqh_A 146 NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKG--TTVITTA-SKRNHAF----LKALGAE 198 (321)
T ss_dssp HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEE-CHHHHHH----HHHHTCS
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcC--CEEEEEe-ccchHHH----HHHcCCC
Confidence 446789999999875 443 555667777765 4788887 5555544 4457764
No 409
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=58.63 E-value=18 Score=32.50 Aligned_cols=49 Identities=20% Similarity=0.200 Sum_probs=33.7
Q ss_pred HhcCCCCC--CEEEEECCC--cChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHH
Q 021397 104 SALNISAG--DHVLDLCAA--PGAKLCMILDIIGDSGSVTGVDVARHRLAACRT 153 (313)
Q Consensus 104 ~~l~~~~g--~~VLDlcag--pG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~ 153 (313)
...++++| ++||=.|++ -|..+.+++...+ ..+|+++|.++++++.+++
T Consensus 152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~G-a~~Vi~~~~~~~~~~~~~~ 204 (357)
T 2zb4_A 152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLG-CSRVVGICGTHEKCILLTS 204 (357)
T ss_dssp HHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHHH
T ss_pred HhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCC-CCeEEEEeCCHHHHHHHHH
Confidence 44578899 999999873 2333444455443 1289999999988876653
No 410
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=58.59 E-value=14 Score=33.41 Aligned_cols=51 Identities=12% Similarity=0.061 Sum_probs=33.7
Q ss_pred hcCCCCC------CEEEEECCCc-ChHH-HHHH-HHhCCCcEEEEEcCCHH---HHHHHHHHHHHcCC
Q 021397 105 ALNISAG------DHVLDLCAAP-GAKL-CMIL-DIIGDSGSVTGVDVARH---RLAACRTLLQKYAL 160 (313)
Q Consensus 105 ~l~~~~g------~~VLDlcagp-G~kt-~~la-~~~~~~~~V~avD~s~~---~l~~~~~~~~~~g~ 160 (313)
...+++| ++||=.|+|+ |..+ .++| +.++ ..+|+++|.+++ +++.++ ++|.
T Consensus 161 ~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~G-a~~Vi~~~~~~~~~~~~~~~~----~lGa 223 (357)
T 2b5w_A 161 HAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKG-YENLYCLGRRDRPDPTIDIIE----ELDA 223 (357)
T ss_dssp HHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTC-CCEEEEEECCCSSCHHHHHHH----HTTC
T ss_pred hcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcC-CcEEEEEeCCcccHHHHHHHH----HcCC
Confidence 3457889 9999999833 3333 4444 4333 124999999988 887765 4665
No 411
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=57.98 E-value=86 Score=27.85 Aligned_cols=59 Identities=15% Similarity=0.032 Sum_probs=43.4
Q ss_pred CEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCC--CCcEEEEecCCCC
Q 021397 112 DHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYAL--GDRCRLFVADGTT 173 (313)
Q Consensus 112 ~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~--~~~v~~~~~D~~~ 173 (313)
..|+++|||-=.-...+.. +....++=+| .+..++.-++.+.+.+. .++..++.+|.+.
T Consensus 104 ~QvV~LGaGlDTra~Rl~~--~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d 164 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDW--PTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ 164 (310)
T ss_dssp CEEEEETCTTCCHHHHSCC--CTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS
T ss_pred CeEEEeCCCCCchhhhccC--CCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh
Confidence 4799999998666443331 2236899999 69999888888876652 3578889999876
No 412
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=57.75 E-value=30 Score=29.87 Aligned_cols=63 Identities=8% Similarity=-0.169 Sum_probs=47.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHh-CCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDII-GDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~-~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.+.+||=.|+ +||.+.++++.+ ..+..|+.++.+...++.+.+.++..+-. ++.++..|....
T Consensus 11 ~~k~vlITGa-s~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~ 74 (311)
T 3o26_A 11 KRRCAVVTGG-NKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHE-NVVFHQLDVTDP 74 (311)
T ss_dssp -CCEEEESSC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCC-SEEEEECCTTSC
T ss_pred CCcEEEEecC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEccCCCc
Confidence 4667775555 578888887765 23468999999999988888877766543 689999998776
No 413
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=57.14 E-value=26 Score=30.29 Aligned_cols=62 Identities=11% Similarity=-0.060 Sum_probs=47.4
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.|.+||=.|++ |+.+..+++.+. .+..|+.+|.++..++.+.+.++..+. ++.++..|.++.
T Consensus 31 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dl~d~ 93 (276)
T 3r1i_A 31 SGKRALITGAS-TGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGG--KALPIRCDVTQP 93 (276)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTC--CCEEEECCTTCH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--eEEEEEcCCCCH
Confidence 46788877765 677777776552 345899999999999988888877764 688899998754
No 414
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=56.76 E-value=32 Score=29.87 Aligned_cols=62 Identities=11% Similarity=-0.052 Sum_probs=46.1
Q ss_pred CCCEEEEECCCcChHHHHHHHHh-CCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDII-GDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~-~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.+..||=.|++ |+.+..+++.+ ..+..|+.+|.+...++.+.+.+...+- ++.++..|.++.
T Consensus 27 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dv~d~ 89 (283)
T 3v8b_A 27 PSPVALITGAG-SGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGG--QAIALEADVSDE 89 (283)
T ss_dssp CCCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTC--CEEEEECCTTCH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEccCCCH
Confidence 46778877755 56777777655 2346899999999998888877765553 688999998753
No 415
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=56.64 E-value=38 Score=28.91 Aligned_cols=63 Identities=14% Similarity=0.043 Sum_probs=46.6
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHH-cCCCCcEEEEecCCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQK-YALGDRCRLFVADGTTFS 175 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~-~g~~~~v~~~~~D~~~~d 175 (313)
.|.+||=.|+ +|+.+.++++.+. .+..|+.+|.++..++.+.+.+.. .+. ++.++..|..+.+
T Consensus 19 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~Dv~~~~ 83 (266)
T 4egf_A 19 DGKRALITGA-TKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGT--DVHTVAIDLAEPD 83 (266)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC--CEEEEECCTTSTT
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC--cEEEEEecCCCHH
Confidence 4667776665 5677777777653 345899999999999888777765 453 6899999997654
No 416
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=56.59 E-value=6.6 Score=35.00 Aligned_cols=49 Identities=16% Similarity=0.047 Sum_probs=36.5
Q ss_pred cCCCCCC-EEEEECC--CcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q 021397 106 LNISAGD-HVLDLCA--APGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYAL 160 (313)
Q Consensus 106 l~~~~g~-~VLDlca--gpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~ 160 (313)
.++++|+ +||=.|+ |-|..+.++++.++ .+|++++.++++++.++ ++|.
T Consensus 144 ~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G--a~vi~~~~~~~~~~~~~----~lGa 195 (328)
T 1xa0_A 144 HGLTPERGPVLVTGATGGVGSLAVSMLAKRG--YTVEASTGKAAEHDYLR----VLGA 195 (328)
T ss_dssp TTCCGGGCCEEESSTTSHHHHHHHHHHHHTT--CCEEEEESCTTCHHHHH----HTTC
T ss_pred cCCCCCCceEEEecCCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHH----HcCC
Confidence 4678886 8999987 34556677777765 47999999998887765 3665
No 417
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=56.41 E-value=42 Score=30.71 Aligned_cols=64 Identities=13% Similarity=0.063 Sum_probs=46.8
Q ss_pred CCCEEEEECCCcChHHHHHHHHhCCC--cEEEEEcCCHHHHHHHHHHHHHcCC--CCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIGDS--GSVTGVDVARHRLAACRTLLQKYAL--GDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~~~--~~V~avD~s~~~l~~~~~~~~~~g~--~~~v~~~~~D~~~~ 174 (313)
.+++||=.| |+|+.+.++++.+-.. ..|+++|.++..+..+.+.+..... ..++.++.+|....
T Consensus 34 ~~k~vLVTG-atG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~ 101 (399)
T 3nzo_A 34 SQSRFLVLG-GAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSI 101 (399)
T ss_dssp HTCEEEEET-TTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSH
T ss_pred CCCEEEEEc-CChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCH
Confidence 367888666 4688998888876443 4899999999988877766655421 13688999998653
No 418
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=56.31 E-value=31 Score=29.40 Aligned_cols=63 Identities=13% Similarity=0.061 Sum_probs=47.0
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.|.+||=.|+ +|+.+.++++.+. .+.+|+.+|.++..++.+.+.++..+- .++.++..|.++.
T Consensus 9 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~~ 72 (262)
T 3pk0_A 9 QGRSVVVTGG-TKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGS-GKVIGVQTDVSDR 72 (262)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSS-SCEEEEECCTTSH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCC-CcEEEEEcCCCCH
Confidence 4667776665 5677877777653 335899999999999888888777663 2688999998753
No 419
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=56.02 E-value=17 Score=32.60 Aligned_cols=49 Identities=18% Similarity=0.122 Sum_probs=35.7
Q ss_pred hcCCCCCCEEEEECC-C-cChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q 021397 105 ALNISAGDHVLDLCA-A-PGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYAL 160 (313)
Q Consensus 105 ~l~~~~g~~VLDlca-g-pG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~ 160 (313)
...+++|++||=.|| | -|..+.++++..+ .+|+++ .++++++.++ ++|.
T Consensus 145 ~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~G--a~Vi~~-~~~~~~~~~~----~lGa 195 (343)
T 3gaz_A 145 RAQVQDGQTVLIQGGGGGVGHVAIQIALARG--ARVFAT-ARGSDLEYVR----DLGA 195 (343)
T ss_dssp TTCCCTTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEE-ECHHHHHHHH----HHTS
T ss_pred hcCCCCCCEEEEecCCCHHHHHHHHHHHHCC--CEEEEE-eCHHHHHHHH----HcCC
Confidence 356889999999984 3 3556667777654 589999 8888877664 4565
No 420
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=55.99 E-value=51 Score=27.95 Aligned_cols=64 Identities=17% Similarity=0.040 Sum_probs=45.6
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.|..||=.|+ +|+.+.++++.+. .+..|+.+|.++..++.+.+.+.......++.++..|.++.
T Consensus 12 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 76 (267)
T 1iy8_A 12 TDRVVLITGG-GSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDE 76 (267)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCH
Confidence 4677887775 5777777777653 33589999999998887777766552112688899998754
No 421
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=55.96 E-value=22 Score=30.31 Aligned_cols=62 Identities=6% Similarity=-0.010 Sum_probs=45.6
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.|.++|=.|+ +|+.+.++++.+. .+.+|+.+|.++..++.+.+.++..+- ++.++..|.++.
T Consensus 5 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~ 67 (257)
T 3imf_A 5 KEKVVIITGG-SSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPG--QILTVQMDVRNT 67 (257)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTT--CEEEEECCTTCH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEccCCCH
Confidence 3567775554 5678877777652 345899999999999888877765553 688999998753
No 422
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=55.92 E-value=40 Score=28.63 Aligned_cols=62 Identities=18% Similarity=0.177 Sum_probs=45.5
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.|..+|=.|+ +|+.+..+++.+. .+..|+.++.++..++.+.+.++..+. ++.++..|..+.
T Consensus 6 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~ 68 (262)
T 1zem_A 6 NGKVCLVTGA-GGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGV--EARSYVCDVTSE 68 (262)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTS--CEEEEECCTTCH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEecCCCH
Confidence 4667886665 5677777777653 335899999999988887777766553 688899998654
No 423
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=55.64 E-value=41 Score=29.27 Aligned_cols=62 Identities=13% Similarity=0.034 Sum_probs=46.1
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.|..||=.|+ +|+.+..+++.+. .+..|+++|.++..++.+.+.++..+. ++.++..|.++.
T Consensus 33 ~~k~vlVTGa-s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dv~d~ 95 (291)
T 3cxt_A 33 KGKIALVTGA-SYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGI--NAHGYVCDVTDE 95 (291)
T ss_dssp TTCEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC--CCEEEECCTTCH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--eEEEEEecCCCH
Confidence 4677887775 5778877777652 335899999999988887777776664 578889998753
No 424
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=55.52 E-value=53 Score=27.11 Aligned_cols=61 Identities=11% Similarity=-0.085 Sum_probs=44.4
Q ss_pred CCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHH-HcCCCCcEEEEecCCCCC
Q 021397 111 GDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQ-KYALGDRCRLFVADGTTF 174 (313)
Q Consensus 111 g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~-~~g~~~~v~~~~~D~~~~ 174 (313)
+.+||=.|+ +|+.+.++++.+. .+..|+.++.+...++.+.+.+. ..+. ++.++..|.++.
T Consensus 2 ~k~vlITGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~ 64 (235)
T 3l77_A 2 MKVAVITGA-SRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGV--EVFYHHLDVSKA 64 (235)
T ss_dssp CCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC--CEEEEECCTTCH
T ss_pred CCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCC--eEEEEEeccCCH
Confidence 456666665 5677777777653 33589999999999888877765 4453 688999998753
No 425
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=55.50 E-value=39 Score=29.45 Aligned_cols=63 Identities=11% Similarity=-0.085 Sum_probs=45.0
Q ss_pred CCCCEEEEECCCcC-hHHHHHHHHh-CCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 109 SAGDHVLDLCAAPG-AKLCMILDII-GDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 109 ~~g~~VLDlcagpG-~kt~~la~~~-~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
-.|..||=.|++.| |.+..+++.+ ..+..|+.++.++...+.+++..+..+ ++.++..|.++.
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~ 93 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELG---AFVAGHCDVADA 93 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHT---CEEEEECCTTCH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CceEEECCCCCH
Confidence 45788999998864 5666666654 234589999999876666666665554 478889998753
No 426
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=55.46 E-value=15 Score=28.29 Aligned_cols=51 Identities=14% Similarity=0.064 Sum_probs=34.6
Q ss_pred HHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCC-CcEEEEEcCCHHHHHHHHH
Q 021397 101 AAVSALNISAGDHVLDLCAAPGAKLCMILDIIGD-SGSVTGVDVARHRLAACRT 153 (313)
Q Consensus 101 ~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~-~~~V~avD~s~~~l~~~~~ 153 (313)
.++..+....+.+|+=+|+ |..+..+++.+.. +..|+.+|.++.+.+.+.+
T Consensus 11 ~a~~~~~~~~~~~v~iiG~--G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~ 62 (144)
T 3oj0_A 11 IVYDIVRKNGGNKILLVGN--GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAE 62 (144)
T ss_dssp HHHHHHHHHCCCEEEEECC--SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHhccCCEEEEECC--CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHH
Confidence 3444444455899999987 6666666665532 2359999999988766543
No 427
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=55.35 E-value=17 Score=30.45 Aligned_cols=61 Identities=10% Similarity=-0.141 Sum_probs=43.2
Q ss_pred CCEEEEECCCcChHHHHHHHHhCC-Cc-------EEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 111 GDHVLDLCAAPGAKLCMILDIIGD-SG-------SVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 111 g~~VLDlcagpG~kt~~la~~~~~-~~-------~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
+..||=.| |+|+.+.++++.+.. +. .|++++.++..++.+.+.++..+. ++.++..|..+.
T Consensus 2 ~k~vlITG-asggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~ 70 (244)
T 2bd0_A 2 KHILLITG-AGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGA--LTDTITADISDM 70 (244)
T ss_dssp CEEEEEET-TTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTC--EEEEEECCTTSH
T ss_pred CCEEEEEC-CCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCC--eeeEEEecCCCH
Confidence 34566555 567888888776532 23 799999999988887777665443 688999998753
No 428
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=55.25 E-value=49 Score=28.23 Aligned_cols=62 Identities=21% Similarity=0.117 Sum_probs=46.0
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCC------------HHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVA------------RHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s------------~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.|..||=.|++ |+.+.++++.+. .+..|+.+|.+ ...++...+.++..+. ++.++..|.++.
T Consensus 12 ~gk~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~ 86 (278)
T 3sx2_A 12 TGKVAFITGAA-RGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGS--RIVARQADVRDR 86 (278)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTC--CEEEEECCTTCH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCC--eEEEEeCCCCCH
Confidence 47788877754 677777776652 34689999987 7788887777777764 689999998753
No 429
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=55.13 E-value=51 Score=27.86 Aligned_cols=62 Identities=15% Similarity=0.065 Sum_probs=44.6
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHc-CCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKY-ALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~-g~~~~v~~~~~D~~~~ 174 (313)
.|.+||=.|+ +|+.+.++++.+. .+.+|++++.++..++.+.+.++.. +. ++.++..|.++.
T Consensus 6 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~D~~~~ 69 (263)
T 3ai3_A 6 SGKVAVITGS-SSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGV--RVLEVAVDVATP 69 (263)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC--CEEEEECCTTSH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCC--ceEEEEcCCCCH
Confidence 3667776665 4778887777653 3358999999998888777666554 53 688899998753
No 430
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=55.09 E-value=50 Score=28.22 Aligned_cols=62 Identities=11% Similarity=-0.010 Sum_probs=46.0
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCC------------HHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVA------------RHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s------------~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.|.+||=.|++ |+.+.++++.+. .+..|+.+|.+ ...++.+...++..+. ++.++..|..+.
T Consensus 9 ~gk~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~ 83 (287)
T 3pxx_A 9 QDKVVLVTGGA-RGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGR--KAYTAEVDVRDR 83 (287)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTS--CEEEEECCTTCH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCC--ceEEEEccCCCH
Confidence 46778877765 577777776552 34589999987 7788888877777764 688999998753
No 431
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=55.09 E-value=33 Score=29.52 Aligned_cols=62 Identities=11% Similarity=-0.040 Sum_probs=46.8
Q ss_pred CCCEEEEECCCcChHHHHHHHHh-CCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDII-GDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~-~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.|..||=.| |+|+.+..+++.+ ..+..|+.+|.++..++.+.+.++..+. ++..+..|..+.
T Consensus 27 ~~k~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~ 89 (270)
T 3ftp_A 27 DKQVAIVTG-ASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGL--EGRGAVLNVNDA 89 (270)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTC--CCEEEECCTTCH
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEEeCCCH
Confidence 466777555 5567777777665 2345899999999999988888887775 578888998653
No 432
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=54.83 E-value=44 Score=28.66 Aligned_cols=64 Identities=16% Similarity=-0.035 Sum_probs=47.1
Q ss_pred CCCEEEEECCCcChHHHHHHHHh-CCCcEEEEEcCCHHHHHHHHHHHHHcCCC-CcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDII-GDSGSVTGVDVARHRLAACRTLLQKYALG-DRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~-~~~~~V~avD~s~~~l~~~~~~~~~~g~~-~~v~~~~~D~~~~ 174 (313)
.|.+||=.|+ +|+.+.++++.+ ..+.+|+.+|.++..++.+.+.++..+.. .++.++..|.++.
T Consensus 10 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~ 75 (281)
T 3svt_A 10 QDRTYLVTGG-GSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNE 75 (281)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCH
Confidence 4677887776 467777777655 23468999999999998888887766532 2688899998753
No 433
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=54.77 E-value=54 Score=27.84 Aligned_cols=63 Identities=13% Similarity=0.039 Sum_probs=45.9
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHH-cCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQK-YALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~-~g~~~~v~~~~~D~~~~ 174 (313)
.|..+|=.|++ |+.+..+++.+. .+..|+.+|.++..++.+.+.+.. .+- .++.++..|.++.
T Consensus 7 ~~k~~lVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dv~~~ 71 (265)
T 3lf2_A 7 SEAVAVVTGGS-SGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPG-ARLFASVCDVLDA 71 (265)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTT-CCEEEEECCTTCH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-ceEEEEeCCCCCH
Confidence 36677777765 567777776552 345899999999999888887766 443 2588999998753
No 434
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=54.49 E-value=42 Score=28.63 Aligned_cols=63 Identities=13% Similarity=-0.041 Sum_probs=46.1
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT 173 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~ 173 (313)
.|.++|=.|+ +|+.+.++++.+. .+.+|+.+|.++..++.+.+.+...+....+..+..|...
T Consensus 9 ~~k~~lVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~ 72 (267)
T 3t4x_A 9 KGKTALVTGS-TAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGT 72 (267)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTS
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCC
Confidence 4667776665 5777777777652 3468999999999988888777766533467888889864
No 435
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=54.29 E-value=25 Score=30.29 Aligned_cols=62 Identities=10% Similarity=-0.034 Sum_probs=47.1
Q ss_pred CCCEEEEECCCcChHHHHHHHHh-CCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDII-GDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~-~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.|..+|=.| |+|+.+..+++.+ ..+..|+.+|.++..++.+.+.++..+. ++.++..|..+.
T Consensus 25 ~gk~~lVTG-as~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dv~d~ 87 (271)
T 4ibo_A 25 GGRTALVTG-SSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGH--DAEAVAFDVTSE 87 (271)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC--CEEECCCCTTCH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--ceEEEEcCCCCH
Confidence 467777666 5567777777765 2345899999999999988888877764 688899998753
No 436
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=54.21 E-value=8.2 Score=35.37 Aligned_cols=47 Identities=13% Similarity=-0.068 Sum_probs=35.4
Q ss_pred CCCCEEEEECCCcChHH---HHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCC
Q 021397 109 SAGDHVLDLCAAPGAKL---CMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALG 161 (313)
Q Consensus 109 ~~g~~VLDlcagpG~kt---~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~ 161 (313)
++|++||=.++|.|+.+ .++|+..+ .+|+++|.++++++.++ ++|..
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~~G--a~Vi~~~~~~~~~~~~~----~lGa~ 218 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLKDG--IKLVNIVRKQEQADLLK----AQGAV 218 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHHHT--CCEEEEESSHHHHHHHH----HTTCS
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHH----hCCCc
Confidence 78999998876666665 45566654 47999999999988776 46764
No 437
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=54.21 E-value=41 Score=28.47 Aligned_cols=62 Identities=15% Similarity=-0.018 Sum_probs=45.5
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.|..+|=.| |+|+.+.++++.+. .+.+|+.+|.++..++.+.+.++..+. ++.++..|..+.
T Consensus 4 ~~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~ 66 (260)
T 2qq5_A 4 NGQVCVVTG-ASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGG--QCVPVVCDSSQE 66 (260)
T ss_dssp TTCEEEESS-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSS--EEEEEECCTTSH
T ss_pred CCCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCC--ceEEEECCCCCH
Confidence 356677666 56778888877653 335899999999988888777766653 688899998753
No 438
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=54.08 E-value=52 Score=28.17 Aligned_cols=63 Identities=13% Similarity=0.039 Sum_probs=46.4
Q ss_pred CCCCEEEEECCCcChHHHHHHHHh-CCCcEEEEEcC-------------CHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 109 SAGDHVLDLCAAPGAKLCMILDII-GDSGSVTGVDV-------------ARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 109 ~~g~~VLDlcagpG~kt~~la~~~-~~~~~V~avD~-------------s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
-.|..+|=.|++ |+.+.++++.+ ..+.+|+.+|. ++..++.+.+.++..+. ++.++..|.++.
T Consensus 13 l~gk~~lVTGas-~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~ 89 (280)
T 3pgx_A 13 LQGRVAFITGAA-RGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGR--KALTRVLDVRDD 89 (280)
T ss_dssp TTTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTC--CEEEEECCTTCH
T ss_pred cCCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCC--eEEEEEcCCCCH
Confidence 357788877765 56777777655 23458999998 78888888877776664 688999998653
No 439
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=54.05 E-value=53 Score=27.63 Aligned_cols=60 Identities=13% Similarity=-0.113 Sum_probs=43.7
Q ss_pred CEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 112 DHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 112 ~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
..||=.|+ +|+.+.++++.+. .+.+|++++.++..++.+.+.++..+. ++.++..|.++.
T Consensus 3 k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~ 63 (256)
T 1geg_A 3 KVALVTGA-GQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGG--HAVAVKVDVSDR 63 (256)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTSH
T ss_pred CEEEEECC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEecCCCH
Confidence 45665664 5778887777653 335899999999988887777766653 688899998753
No 440
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=53.96 E-value=53 Score=28.55 Aligned_cols=62 Identities=16% Similarity=0.096 Sum_probs=45.7
Q ss_pred CCCEEEEECCCcChHHHHHHHHh-CCCcEEEEEcCC------------HHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDII-GDSGSVTGVDVA------------RHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~-~~~~~V~avD~s------------~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.|..+|=.|++ ||.+..+++.+ ..+..|+.+|.+ +..++.+.+.++..+. ++.++..|.++.
T Consensus 27 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~ 101 (299)
T 3t7c_A 27 EGKVAFITGAA-RGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGR--RIIASQVDVRDF 101 (299)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTC--CEEEEECCTTCH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCC--ceEEEECCCCCH
Confidence 46788877765 56777776654 234689999987 7788877777777764 689999998754
No 441
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=53.83 E-value=12 Score=35.37 Aligned_cols=47 Identities=19% Similarity=0.176 Sum_probs=37.5
Q ss_pred CCEEEEECCCcChHHHHHHHHhCC----CcEEEEEcCCHHHHHHHHHHHHH
Q 021397 111 GDHVLDLCAAPGAKLCMILDIIGD----SGSVTGVDVARHRLAACRTLLQK 157 (313)
Q Consensus 111 g~~VLDlcagpG~kt~~la~~~~~----~~~V~avD~s~~~l~~~~~~~~~ 157 (313)
.-.|+++|+|.|..+.-+.+.+.. ..+++.||+|+...+.-++.+..
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 368999999999999888766532 24799999999988777777765
No 442
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=53.62 E-value=47 Score=28.05 Aligned_cols=62 Identities=13% Similarity=-0.017 Sum_probs=45.4
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.|.+||=.| |+|+.+.++++.+. .+..|++++.++..++.+.+.++..+. ++.++..|..+.
T Consensus 13 ~~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~ 75 (260)
T 2zat_A 13 ENKVALVTA-STDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGL--SVTGTVCHVGKA 75 (260)
T ss_dssp TTCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTCH
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--ceEEEEccCCCH
Confidence 466777555 56788888877653 335899999999988877777766664 588888998653
No 443
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=53.59 E-value=14 Score=34.48 Aligned_cols=50 Identities=24% Similarity=0.203 Sum_probs=36.3
Q ss_pred cCCCCCCEEEEECC-C-cChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCC
Q 021397 106 LNISAGDHVLDLCA-A-PGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALG 161 (313)
Q Consensus 106 l~~~~g~~VLDlca-g-pG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~ 161 (313)
..+++|++||=.|| | -|..+.++++..+ .+|++++.++.+++.++ ++|..
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~G--a~vi~~~~~~~~~~~~~----~lGa~ 267 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGG--GIPVAVVSSAQKEAAVR----ALGCD 267 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHH----HTTCC
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHH----hcCCC
Confidence 56889999998886 2 2445566666654 58999999999988764 46653
No 444
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=53.51 E-value=43 Score=28.30 Aligned_cols=64 Identities=11% Similarity=-0.011 Sum_probs=45.9
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCC-CcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALG-DRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~-~~v~~~~~D~~~~ 174 (313)
.+..+|=.|++ |+.+..+++.+. .+.+|+.++.++..++.+.+.+...+-. .++.++..|.++.
T Consensus 6 ~~k~~lVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 71 (250)
T 3nyw_A 6 QKGLAIITGAS-QGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDC 71 (250)
T ss_dssp CCCEEEEESTT-SHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCH
Confidence 35677777765 667777766542 2358999999999999888877766321 3688899998753
No 445
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=53.12 E-value=9.7 Score=33.90 Aligned_cols=49 Identities=18% Similarity=0.113 Sum_probs=36.3
Q ss_pred cCCCCCC-EEEEECC--CcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q 021397 106 LNISAGD-HVLDLCA--APGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYAL 160 (313)
Q Consensus 106 l~~~~g~-~VLDlca--gpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~ 160 (313)
.++++|+ +||=.|| |-|..+.++++..+ .+|++++.++++++.++ ++|.
T Consensus 145 ~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G--a~vi~~~~~~~~~~~~~----~lGa 196 (330)
T 1tt7_A 145 NGLSPEKGSVLVTGATGGVGGIAVSMLNKRG--YDVVASTGNREAADYLK----QLGA 196 (330)
T ss_dssp TTCCGGGCCEEEESTTSHHHHHHHHHHHHHT--CCEEEEESSSSTHHHHH----HHTC
T ss_pred cCcCCCCceEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH----HcCC
Confidence 4678886 8999997 34555677777765 47999999988887765 3565
No 446
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=52.52 E-value=19 Score=35.57 Aligned_cols=39 Identities=13% Similarity=0.048 Sum_probs=28.7
Q ss_pred CCEEEEECCCcChHHHHHHHHhC-----------CCcEEEEEcC---CHHHHH
Q 021397 111 GDHVLDLCAAPGAKLCMILDIIG-----------DSGSVTGVDV---ARHRLA 149 (313)
Q Consensus 111 g~~VLDlcagpG~kt~~la~~~~-----------~~~~V~avD~---s~~~l~ 149 (313)
.-+|||+|-|+|...+...+... ..-+++++|. +..-+.
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~ 119 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLA 119 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHH
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHH
Confidence 35899999999999887766531 1235899999 666665
No 447
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=51.96 E-value=61 Score=27.82 Aligned_cols=62 Identities=8% Similarity=0.034 Sum_probs=45.7
Q ss_pred CCCEEEEECCCcChHHHHHHHHhCC-CcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIGD-SGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~~-~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.+.+||=.|+ +|+.+..+++.+.. +..|++++.++..++.+.+.++..+. ++.++.+|.++.
T Consensus 43 ~~k~vlITGa-sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dl~d~ 105 (285)
T 2c07_A 43 ENKVALVTGA-GRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGY--ESSGYAGDVSKK 105 (285)
T ss_dssp SSCEEEEEST-TSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTC--CEEEEECCTTCH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCC--ceeEEECCCCCH
Confidence 3567886665 57888888877643 35788999998888877777665554 688899998653
No 448
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=51.86 E-value=24 Score=32.81 Aligned_cols=53 Identities=17% Similarity=0.135 Sum_probs=37.9
Q ss_pred CEEEEECCCcChHHHHHHHHhC------CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEE
Q 021397 112 DHVLDLCAAPGAKLCMILDIIG------DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLF 167 (313)
Q Consensus 112 ~~VLDlcagpG~kt~~la~~~~------~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~ 167 (313)
-.|+++|+|.|..+.-+.+.+. ...+++.||+|+...+.-++.++..+ +|.+.
T Consensus 82 ~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~~---~v~W~ 140 (387)
T 1zkd_A 82 LRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGIR---NIHWH 140 (387)
T ss_dssp EEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTCS---SEEEE
T ss_pred cEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCCC---CeEEe
Confidence 4799999999999988876543 23489999999987765555443322 46554
No 449
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=51.74 E-value=29 Score=30.02 Aligned_cols=63 Identities=14% Similarity=0.025 Sum_probs=47.5
Q ss_pred CCCEEEEECCCcChHHHHHHHHh-CCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDII-GDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~-~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d 175 (313)
.|..+|=.|+ +|+.+..+++.+ ..+.+|+.+|.++..++.+.+.+...+. ++.++..|....+
T Consensus 32 ~gk~~lVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~ 95 (275)
T 4imr_A 32 RGRTALVTGS-SRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGG--TAQELAGDLSEAG 95 (275)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTC--CEEEEECCTTSTT
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC--eEEEEEecCCCHH
Confidence 4677776664 567777777765 2345899999999988888888777664 6889999987654
No 450
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=51.01 E-value=23 Score=33.52 Aligned_cols=65 Identities=14% Similarity=0.094 Sum_probs=47.5
Q ss_pred HHHhcCCC--CCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 102 AVSALNIS--AGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 102 ~~~~l~~~--~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
+...+... +-.+|+=+ |-|..+..+|+.+.+...|.-+|.++++++.+.+.+ + +..++++|++..
T Consensus 224 ~~~~~g~~~~~~~~v~I~--GgG~ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~l-----~-~~~Vi~GD~td~ 290 (461)
T 4g65_A 224 VMSELQRLEKPYRRIMIV--GGGNIGASLAKRLEQTYSVKLIERNLQRAEKLSEEL-----E-NTIVFCGDAADQ 290 (461)
T ss_dssp HHHHTTGGGSCCCEEEEE--CCSHHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHC-----T-TSEEEESCTTCH
T ss_pred HHHhhccccccccEEEEE--cchHHHHHHHHHhhhcCceEEEecCHHHHHHHHHHC-----C-CceEEeccccch
Confidence 44444432 34577654 456677888988888789999999999998887653 2 578999999753
No 451
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=50.80 E-value=55 Score=28.10 Aligned_cols=62 Identities=16% Similarity=0.105 Sum_probs=44.6
Q ss_pred CCCEEEEECCCcChHHHHHHHHh-CCCcEEEEEcCC----------------HHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDII-GDSGSVTGVDVA----------------RHRLAACRTLLQKYALGDRCRLFVADGT 172 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~-~~~~~V~avD~s----------------~~~l~~~~~~~~~~g~~~~v~~~~~D~~ 172 (313)
.|..+|=.|++ |+.+..+++.+ ..+..|+.+|.+ ...++.+.+.++..+. ++.++..|.+
T Consensus 10 ~~k~~lVTGas-~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~ 86 (286)
T 3uve_A 10 EGKVAFVTGAA-RGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNR--RIVTAEVDVR 86 (286)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTC--CEEEEECCTT
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCC--ceEEEEcCCC
Confidence 46788877766 56777777655 234689999987 7777777776666553 6889999987
Q ss_pred CC
Q 021397 173 TF 174 (313)
Q Consensus 173 ~~ 174 (313)
+.
T Consensus 87 ~~ 88 (286)
T 3uve_A 87 DY 88 (286)
T ss_dssp CH
T ss_pred CH
Confidence 54
No 452
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=50.25 E-value=65 Score=27.43 Aligned_cols=62 Identities=16% Similarity=0.103 Sum_probs=44.6
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHH-HHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLL-QKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~-~~~g~~~~v~~~~~D~~~~ 174 (313)
.|..||=.|+ +|+.+..+++.+. .+..|++++.++..++.+.+.+ +..+. ++.++..|....
T Consensus 20 ~~k~~lVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~Dl~~~ 83 (267)
T 1vl8_A 20 RGRVALVTGG-SRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGV--ETMAFRCDVSNY 83 (267)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC--CEEEEECCTTCH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC--eEEEEEcCCCCH
Confidence 4667786765 5778887777653 3358999999998888776666 44453 588888998653
No 453
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=50.19 E-value=49 Score=27.50 Aligned_cols=60 Identities=12% Similarity=0.004 Sum_probs=45.1
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADG 171 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~ 171 (313)
.|..||=.|+ +|+.+.++++.+. .+.+|+.+|.++..++.+.+.++..+.. ++.++..|.
T Consensus 13 ~~k~vlITGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~d~ 73 (247)
T 3i1j_A 13 KGRVILVTGA-ARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQP-QPLIIALNL 73 (247)
T ss_dssp TTCEEEESST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSC-CCEEEECCT
T ss_pred CCCEEEEeCC-CChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCC-CceEEEecc
Confidence 4677776665 5778888777653 3458999999999999998888887743 577777776
No 454
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=50.02 E-value=54 Score=27.62 Aligned_cols=62 Identities=15% Similarity=0.065 Sum_probs=45.5
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.+.+||=.| |+|+.+.++++.+- .+..|++++.++..++.+.+.++..+. ++.++..|....
T Consensus 13 ~~k~vlITG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~ 75 (266)
T 1xq1_A 13 KAKTVLVTG-GTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGF--QVTGSVCDASLR 75 (266)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTSH
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--eeEEEECCCCCH
Confidence 356777555 57788888877653 335899999999988887777766654 688889998653
No 455
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=49.67 E-value=71 Score=27.25 Aligned_cols=62 Identities=18% Similarity=0.150 Sum_probs=45.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHh-CCCcEEEEEcC-------------CHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDII-GDSGSVTGVDV-------------ARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~-~~~~~V~avD~-------------s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.|..+|=.|++ |+.+.++++.+ ..+.+|+.+|. +...++.+.+.++..+. ++.++..|..+.
T Consensus 10 ~~k~~lVTGas-~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~ 85 (277)
T 3tsc_A 10 EGRVAFITGAA-RGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANR--RIVAAVVDTRDF 85 (277)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTC--CEEEEECCTTCH
T ss_pred CCCEEEEECCc-cHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCC--eEEEEECCCCCH
Confidence 46778877765 56777776654 23458999998 77888877777777664 688999998754
No 456
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=49.65 E-value=24 Score=30.61 Aligned_cols=62 Identities=10% Similarity=-0.063 Sum_probs=45.3
Q ss_pred CCCEEEEECCCcChHHHHHHHHh-CCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDII-GDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~-~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.|..||=.|++ |+.+..+++.+ ..+..|+.+|.++..++.+.+.++..+. ++.++..|.++.
T Consensus 7 ~gk~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~ 69 (280)
T 3tox_A 7 EGKIAIVTGAS-SGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGG--EAAALAGDVGDE 69 (280)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTC--CEEECCCCTTCH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEECCCCCH
Confidence 46677766654 67777777655 2345899999999998888877765553 688889998753
No 457
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=49.16 E-value=58 Score=27.21 Aligned_cols=61 Identities=13% Similarity=-0.034 Sum_probs=44.3
Q ss_pred CCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcC-CHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 111 GDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDV-ARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 111 g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~-s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
|.+||=.| |+|+.+..+++.+. .+.+|++++. ++..++.+.+.++..+. ++.++..|..+.
T Consensus 4 ~k~vlVTG-as~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~ 66 (246)
T 2uvd_A 4 GKVALVTG-ASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGS--DAIAVRADVANA 66 (246)
T ss_dssp TCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC--CEEEEECCTTCH
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC--cEEEEEcCCCCH
Confidence 56677555 56788888877653 3358999998 88888877777766653 688889998753
No 458
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=48.81 E-value=66 Score=27.64 Aligned_cols=62 Identities=6% Similarity=-0.095 Sum_probs=45.0
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHc-CCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKY-ALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~-g~~~~v~~~~~D~~~~ 174 (313)
.|.+||=.|+ +|+.+.++++.+. .+..|++++.++..++.+.+.++.. +. ++.++.+|..+.
T Consensus 25 ~~k~vlITGa-sggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~Dl~~~ 88 (302)
T 1w6u_A 25 QGKVAFITGG-GTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGN--KVHAIQCDVRDP 88 (302)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSS--CEEEEECCTTCH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC--ceEEEEeCCCCH
Confidence 3567776665 5788888877653 3358999999998888777666554 43 688999998753
No 459
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=48.49 E-value=58 Score=27.27 Aligned_cols=62 Identities=10% Similarity=-0.102 Sum_probs=44.9
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcC-CHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDV-ARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~-s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.+.+||=.| |+|+.+.++++.+. .+..|++++. ++..++.+.+.++..+. ++.++..|..+.
T Consensus 6 ~~k~vlITG-asggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~ 69 (261)
T 1gee_A 6 EGKVVVITG-SSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG--EAIAVKGDVTVE 69 (261)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC--EEEEEECCTTSH
T ss_pred CCCEEEEeC-CCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCC--ceEEEECCCCCH
Confidence 356777555 56788888877652 3458999999 88888777777766653 688899998753
No 460
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=48.47 E-value=72 Score=27.46 Aligned_cols=64 Identities=13% Similarity=-0.059 Sum_probs=46.0
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcC---CCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYA---LGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g---~~~~v~~~~~D~~~~ 174 (313)
.|.+||=.|+ +|+.+.++++.+. .+..|++++.+...++.+.+.++... ...++.++.+|..+.
T Consensus 17 ~~k~vlVTGa-sggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~ 84 (303)
T 1yxm_A 17 QGQVAIVTGG-ATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNE 84 (303)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCH
Confidence 4678887775 5788888877653 33589999999998888777776521 113688999998753
No 461
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=48.31 E-value=14 Score=32.75 Aligned_cols=49 Identities=18% Similarity=0.186 Sum_probs=34.8
Q ss_pred cCCCCCC-EEEEECC--CcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCC
Q 021397 106 LNISAGD-HVLDLCA--APGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYAL 160 (313)
Q Consensus 106 l~~~~g~-~VLDlca--gpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~ 160 (313)
+++++++ +||=.|| +-|..+.++|+.++ .+|+++|.++++++.+++ +|.
T Consensus 141 ~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~G--a~Vi~~~~~~~~~~~~~~----lGa 192 (324)
T 3nx4_A 141 AGIRPQDGEVVVTGASGGVGSTAVALLHKLG--YQVAAVSGRESTHGYLKS----LGA 192 (324)
T ss_dssp TTCCGGGCCEEESSTTSHHHHHHHHHHHHTT--CCEEEEESCGGGHHHHHH----HTC
T ss_pred cccCCCCCeEEEECCCcHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh----cCC
Confidence 3455532 4887776 34666777888765 489999999999887764 575
No 462
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=48.16 E-value=59 Score=26.87 Aligned_cols=62 Identities=11% Similarity=0.041 Sum_probs=44.5
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHH-cCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQK-YALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~-~g~~~~v~~~~~D~~~~ 174 (313)
.+.+||=.| |+|+.+.++++.+. .+.+|++++.++..++.+.+.+.. .+. ++.++..|..+.
T Consensus 6 ~~~~vlVtG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~ 69 (248)
T 2pnf_A 6 QGKVSLVTG-STRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGV--KAHGVEMNLLSE 69 (248)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCC--CEEEEECCTTCH
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCC--ceEEEEccCCCH
Confidence 356677555 46788888887653 345899999999888877766654 453 588889998653
No 463
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=47.89 E-value=61 Score=27.28 Aligned_cols=62 Identities=19% Similarity=-0.017 Sum_probs=45.7
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcC-CHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDV-ARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~-s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.+.+||=.| |+|+.+.++++.+. .+..|++++. ++..++.+.+.++..+. ++.++.+|..+.
T Consensus 20 ~~k~vlItG-asggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~ 83 (274)
T 1ja9_A 20 AGKVALTTG-AGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGA--QGVAIQADISKP 83 (274)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC--CEEEEECCTTSH
T ss_pred CCCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCC--cEEEEEecCCCH
Confidence 466788555 56888888887653 2358999998 88888877777776664 688899998754
No 464
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=47.69 E-value=66 Score=27.82 Aligned_cols=63 Identities=13% Similarity=-0.101 Sum_probs=46.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEc-CCHHHHHHHHHHHH-HcCCCCcEEEEecCCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVD-VARHRLAACRTLLQ-KYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD-~s~~~l~~~~~~~~-~~g~~~~v~~~~~D~~~~d 175 (313)
.|..+|=.|+ +|+.+..+++.+. .+..|+.++ .++..++.+.+.++ ..+. ++.++..|..+.+
T Consensus 8 ~~k~~lVTGa-s~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~Dl~~~~ 73 (291)
T 1e7w_A 8 TVPVALVTGA-AKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPN--SAITVQADLSNVA 73 (291)
T ss_dssp CCCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTT--CEEEEECCCSSSC
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCC--eeEEEEeecCCcc
Confidence 3567776665 5778888877652 345899999 99998888877775 4553 6889999987765
No 465
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=47.51 E-value=61 Score=27.56 Aligned_cols=62 Identities=15% Similarity=-0.007 Sum_probs=44.8
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcC-CHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDV-ARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~-s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.|.+||=.|+ +|+.+.++++.+. .+..|+.++. ++...+.+.+.++..+. ++.++..|..+.
T Consensus 28 ~~k~vlITGa-s~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~ 91 (271)
T 4iin_A 28 TGKNVLITGA-SKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGY--KAAVIKFDAASE 91 (271)
T ss_dssp SCCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC--CEEEEECCTTCH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC--ceEEEECCCCCH
Confidence 4667776665 4677777776653 3358988888 67777878877777774 689999998653
No 466
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=47.50 E-value=14 Score=32.98 Aligned_cols=53 Identities=13% Similarity=-0.022 Sum_probs=37.9
Q ss_pred CCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 111 GDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 111 g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
..+|+=+|+ |..+..+++.+...+.|+.+|.++++++ +++ . .+.++.+|+++.
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g~v~vid~~~~~~~-~~~----~----~~~~i~gd~~~~ 167 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKK-VLR----S----GANFVHGDPTRV 167 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSCEEEEESCGGGHHH-HHH----T----TCEEEESCTTSH
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCCcEEEEeCChhhhh-HHh----C----CcEEEEeCCCCH
Confidence 456776654 7788888887754444999999999987 553 2 367899998653
No 467
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=47.41 E-value=24 Score=29.53 Aligned_cols=54 Identities=15% Similarity=0.011 Sum_probs=38.1
Q ss_pred CCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
...+|+=+|+ |..+..+++.+...+.|+++|.++.+++.++ . .+.++.+|+++.
T Consensus 8 ~~~~viI~G~--G~~G~~la~~L~~~g~v~vid~~~~~~~~~~-----~----~~~~i~gd~~~~ 61 (234)
T 2aef_A 8 KSRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKKVLR-----S----GANFVHGDPTRV 61 (234)
T ss_dssp --CEEEEESC--CHHHHHHHHHSTTSEEEEEESCGGGHHHHHH-----T----TCEEEESCTTCH
T ss_pred CCCEEEEECC--ChHHHHHHHHHHhCCeEEEEECCHHHHHHHh-----c----CCeEEEcCCCCH
Confidence 3456776665 7888888888765455999999998876554 2 367888998643
No 468
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=46.89 E-value=39 Score=28.20 Aligned_cols=62 Identities=13% Similarity=0.013 Sum_probs=45.0
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCC-HHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVA-RHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s-~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.|.+||=.| |+|+.+.++++.+. .+.+|++++.+ +..++.+.+.++..+. ++.++.+|..+.
T Consensus 6 ~~k~vlVTG-asggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~ 69 (258)
T 3afn_B 6 KGKRVLITG-SSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGG--DAAFFAADLATS 69 (258)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTC--EEEEEECCTTSH
T ss_pred CCCEEEEeC-CCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCC--ceEEEECCCCCH
Confidence 366777555 56888888887653 33589999998 7777777776666553 688999998754
No 469
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=46.67 E-value=44 Score=28.87 Aligned_cols=63 Identities=16% Similarity=-0.055 Sum_probs=45.1
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.|..+|=.|+ +|+.+..+++.+. .+..|+.+|.++..++.+.+.+...+-. .+.++..|.++.
T Consensus 32 ~gk~~lVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~ 95 (281)
T 4dry_A 32 EGRIALVTGG-GTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGN-IVRAVVCDVGDP 95 (281)
T ss_dssp --CEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSS-CEEEEECCTTCH
T ss_pred CCCEEEEeCC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC-eEEEEEcCCCCH
Confidence 4677776665 5778888877652 3468999999999998888777665532 468899998754
No 470
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=46.43 E-value=84 Score=26.78 Aligned_cols=62 Identities=18% Similarity=0.076 Sum_probs=45.5
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCC------------HHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVA------------RHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s------------~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.|.++|=.|++ |+.+.++++.+. .+.+|+.+|.+ ...++...+.++..+. ++.++..|.++.
T Consensus 9 ~~k~~lVTGas-~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~ 83 (281)
T 3s55_A 9 EGKTALITGGA-RGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGR--RCISAKVDVKDR 83 (281)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTC--CEEEEECCTTCH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCC--eEEEEeCCCCCH
Confidence 46788877765 677777777652 34589999987 6777777777777764 688999998753
No 471
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=46.38 E-value=15 Score=30.49 Aligned_cols=51 Identities=10% Similarity=0.057 Sum_probs=35.1
Q ss_pred EEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 021397 114 VLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT 173 (313)
Q Consensus 114 VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~ 173 (313)
|+=+| .|..+..+++.+. .+..|+.+|.++++++.+.+. .+ +.++.+|++.
T Consensus 3 iiIiG--~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~---~~----~~~i~gd~~~ 54 (218)
T 3l4b_C 3 VIIIG--GETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK---LK----ATIIHGDGSH 54 (218)
T ss_dssp EEEEC--CHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH---SS----SEEEESCTTS
T ss_pred EEEEC--CCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH---cC----CeEEEcCCCC
Confidence 44444 4778888887663 235799999999988766532 23 4678888864
No 472
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=46.33 E-value=45 Score=29.05 Aligned_cols=62 Identities=10% Similarity=-0.026 Sum_probs=44.9
Q ss_pred CCCEEEEECCCc-ChHHHHHHHHh-CCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAP-GAKLCMILDII-GDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagp-G~kt~~la~~~-~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.|.+||=.|++. ++.+..+++.+ ..+..|+.+|.++...+.+.+..+..+ ++.++..|.++.
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~ 92 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG---VKLTVPCDVSDA 92 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT---CCEEEECCTTCH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC---CeEEEEcCCCCH
Confidence 477889888864 57777777655 234689999999877777776666665 367888998753
No 473
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=46.06 E-value=82 Score=26.89 Aligned_cols=62 Identities=11% Similarity=-0.005 Sum_probs=45.3
Q ss_pred CCCEEEEECCCcChHHHHHHHHh-CCCcEEEEEcCCHHHHHHHHHHHHH-cCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDII-GDSGSVTGVDVARHRLAACRTLLQK-YALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~-~~~~~V~avD~s~~~l~~~~~~~~~-~g~~~~v~~~~~D~~~~ 174 (313)
.|..+|=.|++ |+.+..+++.+ ..+.+|+.+|.+...++.+.+.+.. .+. ++.++..|.++.
T Consensus 26 ~~k~~lVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~ 89 (277)
T 4fc7_A 26 RDKVAFITGGG-SGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGR--RCLPLSMDVRAP 89 (277)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSS--CEEEEECCTTCH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC--cEEEEEcCCCCH
Confidence 46788877765 67777777765 3345899999999888777666643 343 688999998753
No 474
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=45.59 E-value=86 Score=26.35 Aligned_cols=64 Identities=9% Similarity=0.053 Sum_probs=44.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.|..||=.|++ |+.+.++++.+- .+..|++++.++..++.+.+.+....-..++.++..|.++.
T Consensus 6 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 70 (260)
T 2z1n_A 6 QGKLAVVTAGS-SGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREP 70 (260)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCH
Confidence 45678877754 777777777652 34589999999988887776665431111588889998653
No 475
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=44.90 E-value=66 Score=27.24 Aligned_cols=62 Identities=5% Similarity=-0.094 Sum_probs=44.9
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEE-cCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGV-DVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~av-D~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.|.+||=.|+ +|+.+.++++.+. .+..|+.+ +.++..++.+.+.++..+. ++.++..|.++.
T Consensus 3 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~ 66 (258)
T 3oid_A 3 QNKCALVTGS-SRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGV--KVLVVKANVGQP 66 (258)
T ss_dssp CCCEEEESSC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTC--CEEEEECCTTCH
T ss_pred CCCEEEEecC-CchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC--cEEEEEcCCCCH
Confidence 4566775554 5778888877653 33467775 8999998888887776664 688999998754
No 476
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=44.72 E-value=13 Score=34.73 Aligned_cols=53 Identities=15% Similarity=0.162 Sum_probs=36.5
Q ss_pred CCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 021397 111 GDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT 173 (313)
Q Consensus 111 g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~ 173 (313)
+++|+=+|+ |..+..+++.+. .+..|+++|.++.+++.+++ .| +.++.+|++.
T Consensus 4 ~~~viIiG~--Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~g----~~vi~GDat~ 57 (413)
T 3l9w_A 4 GMRVIIAGF--GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----FG----MKVFYGDATR 57 (413)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----TT----CCCEESCTTC
T ss_pred CCeEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----CC----CeEEEcCCCC
Confidence 345665665 667777777653 23579999999999987763 34 3467888864
No 477
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=44.55 E-value=67 Score=27.38 Aligned_cols=59 Identities=19% Similarity=0.120 Sum_probs=42.4
Q ss_pred CCCEEEEECCCcChHHHHHHHHh-CCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDII-GDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~-~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.|.+||=.|++ |+.+..+++.+ ..+.+|+.+|.+...++.+.+.+ + .++.++..|..+.
T Consensus 29 ~~k~vlVTGas-~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~--~~~~~~~~Dl~~~ 88 (281)
T 3ppi_A 29 EGASAIVSGGA-GGLGEATVRRLHADGLGVVIADLAAEKGKALADEL---G--NRAEFVSTNVTSE 88 (281)
T ss_dssp TTEEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C--TTEEEEECCTTCH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---C--CceEEEEcCCCCH
Confidence 46678877754 66777777655 23458999999998887766554 3 3689999998753
No 478
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=44.32 E-value=75 Score=27.90 Aligned_cols=62 Identities=15% Similarity=0.098 Sum_probs=44.7
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCC------------HHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVA------------RHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s------------~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.|..||=.|+ +|+.+..+++.+. .+..|+.+|.+ ...++.+.+.++..+. ++.++..|.++.
T Consensus 45 ~gk~~lVTGa-s~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~ 119 (317)
T 3oec_A 45 QGKVAFITGA-ARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGR--RIIARQADVRDL 119 (317)
T ss_dssp TTCEEEESSC-SSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTC--CEEEEECCTTCH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCC--eEEEEECCCCCH
Confidence 4677776665 4677777776652 34589999886 7777777777777664 688999998753
No 479
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=44.26 E-value=40 Score=28.43 Aligned_cols=62 Identities=8% Similarity=-0.005 Sum_probs=42.5
Q ss_pred CCCEEEEECCCcChHHHHHHHHhCCC----cEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIGDS----GSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~~~----~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d 175 (313)
.+.+||=.|+ +|+.+.++++.+... ..|++++.+...++.+++..+. + .++.++..|..+.+
T Consensus 20 ~~k~vlITGa-sggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~-~--~~~~~~~~Dl~~~~ 85 (267)
T 1sny_A 20 HMNSILITGC-NRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKN-H--SNIHILEIDLRNFD 85 (267)
T ss_dssp CCSEEEESCC-SSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHH-C--TTEEEEECCTTCGG
T ss_pred CCCEEEEECC-CCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhcc-C--CceEEEEecCCChH
Confidence 3567776665 688888888766433 5899999988766655443332 3 26889999987654
No 480
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=44.20 E-value=30 Score=27.59 Aligned_cols=53 Identities=17% Similarity=0.132 Sum_probs=35.3
Q ss_pred CCEEEEECCCcChHHHHHHHHhCC--CcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 021397 111 GDHVLDLCAAPGAKLCMILDIIGD--SGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT 173 (313)
Q Consensus 111 g~~VLDlcagpG~kt~~la~~~~~--~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~ 173 (313)
+++|+=+|+ |..+..+++.+.. +..|+++|.++++++.++ ..| +.++.+|..+
T Consensus 39 ~~~v~IiG~--G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~----~~g----~~~~~gd~~~ 93 (183)
T 3c85_A 39 HAQVLILGM--GRIGTGAYDELRARYGKISLGIEIREEAAQQHR----SEG----RNVISGDATD 93 (183)
T ss_dssp TCSEEEECC--SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH----HTT----CCEEECCTTC
T ss_pred CCcEEEECC--CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH----HCC----CCEEEcCCCC
Confidence 567887765 6666666665532 257999999999887654 334 3456777654
No 481
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=44.06 E-value=77 Score=28.04 Aligned_cols=63 Identities=13% Similarity=-0.101 Sum_probs=46.3
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEc-CCHHHHHHHHHHHH-HcCCCCcEEEEecCCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVD-VARHRLAACRTLLQ-KYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD-~s~~~l~~~~~~~~-~~g~~~~v~~~~~D~~~~d 175 (313)
.|..||=.| |+|+.+..+++.+. .+..|+.++ .++..++.+.+.+. ..+. ++.++..|..+.+
T Consensus 45 ~~k~~lVTG-as~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~Dl~d~~ 110 (328)
T 2qhx_A 45 TVPVALVTG-AAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPN--SAITVQADLSNVA 110 (328)
T ss_dssp CCCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTT--CEEEEECCCSSSC
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCC--eEEEEEeeCCCch
Confidence 456777555 45788888887652 346899999 99998888877765 4553 6889999987765
No 482
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=43.91 E-value=64 Score=27.12 Aligned_cols=60 Identities=10% Similarity=-0.035 Sum_probs=44.1
Q ss_pred CCCEEEEECCCcChHHHHHHHHh-CCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDII-GDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADG 171 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~-~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~ 171 (313)
.|..||=.|++ |+.+..+++.+ ..+.+|+.+|.++..++.+.+.+...+-. ++.++..|.
T Consensus 11 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~ 71 (252)
T 3f1l_A 11 NDRIILVTGAS-DGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGR-QPQWFILDL 71 (252)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSC-CCEEEECCT
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCC-CceEEEEec
Confidence 46778877754 67777777655 23468999999999998888777665432 577888887
No 483
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=43.27 E-value=41 Score=24.95 Aligned_cols=54 Identities=9% Similarity=0.097 Sum_probs=34.6
Q ss_pred CCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 021397 111 GDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT 173 (313)
Q Consensus 111 g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~ 173 (313)
+++|+=+|+ |..+..+++.+. .+..|+.+|.++.+++.+++ ..+ +.++.+|...
T Consensus 4 ~m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~---~~~----~~~~~~d~~~ 58 (140)
T 1lss_A 4 GMYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASA---EID----ALVINGDCTK 58 (140)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HCS----SEEEESCTTS
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH---hcC----cEEEEcCCCC
Confidence 357776665 777777776553 23579999999988766543 223 3466677653
No 484
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=43.19 E-value=73 Score=26.99 Aligned_cols=62 Identities=10% Similarity=-0.216 Sum_probs=45.1
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcC-CHHHHHHHHHHHHHc-CCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDV-ARHRLAACRTLLQKY-ALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~-s~~~l~~~~~~~~~~-g~~~~v~~~~~D~~~~ 174 (313)
.|..||=.| |+|+.+.++++.+. .+..|+.+|. ++..++.+.+.++.. +. ++.++..|....
T Consensus 10 ~~k~~lVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~ 74 (276)
T 1mxh_A 10 ECPAAVITG-GARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAG--SAVLCKGDLSLS 74 (276)
T ss_dssp -CCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTT--CEEEEECCCSSS
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCC--ceEEEeccCCCc
Confidence 356777554 56788888887653 3358999999 988888777776655 53 688899998876
No 485
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=42.56 E-value=82 Score=26.85 Aligned_cols=62 Identities=10% Similarity=-0.149 Sum_probs=45.2
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcC-CHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDV-ARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~-s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.|..||=.|+ +|+.+.++++.+. .+..|+.++. +...++.+.+.++..+. ++.++..|..+.
T Consensus 27 ~~k~vlVTGa-s~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~d~ 90 (269)
T 4dmm_A 27 TDRIALVTGA-SRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGG--EAFAVKADVSQE 90 (269)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC--CEEEEECCTTSH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCC--cEEEEECCCCCH
Confidence 4667776665 4677777777653 3357888888 78888888888777764 688999998754
No 486
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=41.76 E-value=53 Score=28.21 Aligned_cols=61 Identities=21% Similarity=0.089 Sum_probs=43.3
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.+..||=.|+ +|+.+..+++.+. .+..|+++|.++..++.+.+.+...+ ++.++..|.++.
T Consensus 28 ~~k~vlVTGa-s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~Dv~d~ 89 (276)
T 2b4q_A 28 AGRIALVTGG-SRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG---DCQAIPADLSSE 89 (276)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS---CEEECCCCTTSH
T ss_pred CCCEEEEeCC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---ceEEEEeeCCCH
Confidence 4677887775 5777777777653 33589999999988877666654433 578888888653
No 487
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=41.31 E-value=81 Score=26.61 Aligned_cols=59 Identities=10% Similarity=0.077 Sum_probs=43.1
Q ss_pred CCCEEEEECCCcChHHHHHHHHh-CCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDII-GDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~-~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.|.++|=.|++ |+.+.++++.+ ..+.+|+.+|.++..++.+.+.+ + .++.++..|.++.
T Consensus 7 ~gk~~lVTGas-~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~Dv~~~ 66 (255)
T 4eso_A 7 QGKKAIVIGGT-HGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---G--PRVHALRSDIADL 66 (255)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---G--GGEEEEECCTTCH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C--CcceEEEccCCCH
Confidence 57788877755 67777777665 23458999999998887766554 3 2688999998754
No 488
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=41.04 E-value=65 Score=27.54 Aligned_cols=64 Identities=19% Similarity=0.139 Sum_probs=44.7
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCC-CCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYAL-GDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~-~~~v~~~~~D~~~~ 174 (313)
.|.+||=.| |+|+.+.++++.+. .+..|+++|.++..++.+.+.+...+. ..++.++..|.++.
T Consensus 5 ~~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 70 (280)
T 1xkq_A 5 SNKTVIITG-SSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTE 70 (280)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSH
T ss_pred CCCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCH
Confidence 456677666 45677777777653 345899999999988887776665442 11588899998753
No 489
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=40.80 E-value=64 Score=26.72 Aligned_cols=61 Identities=16% Similarity=0.086 Sum_probs=42.2
Q ss_pred CCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHH-HHcCCCCcEEEEecCCCCC
Q 021397 111 GDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLL-QKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 111 g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~-~~~g~~~~v~~~~~D~~~~ 174 (313)
+.+||=.|+ +|+.+.++++.+. .+..|++++.++..++.+.+.+ +..+ .++.++..|..+.
T Consensus 2 ~k~vlItGa-sggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~ 64 (250)
T 2cfc_A 2 SRVAIVTGA-SSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYA--DKVLRVRADVADE 64 (250)
T ss_dssp CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTG--GGEEEEECCTTCH
T ss_pred CCEEEEeCC-CchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC--CcEEEEEecCCCH
Confidence 356666664 5788888877653 3358999999998887766554 3333 3688999998754
No 490
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=40.77 E-value=84 Score=26.44 Aligned_cols=65 Identities=9% Similarity=0.002 Sum_probs=45.7
Q ss_pred CCCEEEEECCCcC-hHHHHHHHHh-CCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 021397 110 AGDHVLDLCAAPG-AKLCMILDII-GDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 110 ~g~~VLDlcagpG-~kt~~la~~~-~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d 175 (313)
.|.+||=.|++.| |.+..+++.+ ..+.+|+.++.+....+.+.+..+..+-. ++.++..|.++.+
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~ 72 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRN-DSIILPCDVTNDA 72 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSC-CCEEEECCCSSSH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCC-CceEEeCCCCCHH
Confidence 4678888888743 4666666554 23468999999987777777766666542 6889999987643
No 491
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=40.59 E-value=72 Score=26.94 Aligned_cols=64 Identities=14% Similarity=0.049 Sum_probs=43.0
Q ss_pred CCCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.|.+||=.|+ +|+.+.++++.+. .+..|++++.++..++.+.+.+.......++.++.+|.++.
T Consensus 6 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~ 70 (267)
T 2gdz_A 6 NGKVALVTGA-AQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQ 70 (267)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSH
T ss_pred CCCEEEEECC-CCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCH
Confidence 4667887775 5777777776552 34589999999888776655553321112588889998753
No 492
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=40.40 E-value=45 Score=25.72 Aligned_cols=57 Identities=14% Similarity=0.109 Sum_probs=36.7
Q ss_pred CEEEEECCCcChHHHHHHHHhCC-CcEEEEEcCC-HHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 021397 112 DHVLDLCAAPGAKLCMILDIIGD-SGSVTGVDVA-RHRLAACRTLLQKYALGDRCRLFVADGTTFS 175 (313)
Q Consensus 112 ~~VLDlcagpG~kt~~la~~~~~-~~~V~avD~s-~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~d 175 (313)
.+|+=+| .|..+..+++.+.. +..|+.+|.+ +++++.+.+.. . ..+.++.+|+...+
T Consensus 4 ~~vlI~G--~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~---~--~~~~~i~gd~~~~~ 62 (153)
T 1id1_A 4 DHFIVCG--HSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL---G--DNADVIPGDSNDSS 62 (153)
T ss_dssp SCEEEEC--CSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH---C--TTCEEEESCTTSHH
T ss_pred CcEEEEC--CCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh---c--CCCeEEEcCCCCHH
Confidence 4565455 47788888776532 3479999997 56666555432 1 13678899986543
No 493
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=40.39 E-value=2.1e+02 Score=25.87 Aligned_cols=65 Identities=14% Similarity=0.011 Sum_probs=42.5
Q ss_pred CCCEEEEECCCcChHHHHHHHHhCCC-cEEEEEcCCHH---HHHHHHHHHHHcCC-------CCcEEEEecCCCCCC
Q 021397 110 AGDHVLDLCAAPGAKLCMILDIIGDS-GSVTGVDVARH---RLAACRTLLQKYAL-------GDRCRLFVADGTTFS 175 (313)
Q Consensus 110 ~g~~VLDlcagpG~kt~~la~~~~~~-~~V~avD~s~~---~l~~~~~~~~~~g~-------~~~v~~~~~D~~~~d 175 (313)
++.+||=.| |+|+.+.++++.+... ..|++++.++. .++.+.+.++.+.. ..++.++.+|....+
T Consensus 68 ~~~~vlVTG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 143 (427)
T 4f6c_A 68 PLGNTLLTG-ATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMD 143 (427)
T ss_dssp CCEEEEEEC-TTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---C
T ss_pred CCCEEEEec-CCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcc
Confidence 455777666 5789999888877443 47999998877 55555555544310 136899999987644
No 494
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=40.37 E-value=59 Score=26.40 Aligned_cols=60 Identities=8% Similarity=0.014 Sum_probs=39.5
Q ss_pred CcccccccCCeEEEecHHHHHHHHhcCCCCCCEEEEECCCcChHHHHHHHHhCCCcEEEEEcC
Q 021397 81 IATSMAYKQGKIYGIDAASGAAVSALNISAGDHVLDLCAAPGAKLCMILDIIGDSGSVTGVDV 143 (313)
Q Consensus 81 ~~~~~~~~~G~~~~Qd~ss~~~~~~l~~~~g~~VLDlcagpG~kt~~la~~~~~~~~V~avD~ 143 (313)
.+.++.|..- ...|...=-.++....-.+ .-|||+|-|.|-.--|+.+.+++ -.|+++|.
T Consensus 13 mSRLDsfirR-ltaQR~~L~~a~~~v~~~~-GpVlElGLGNGRTydHLRe~~P~-R~I~vfDR 72 (174)
T 3iht_A 13 QSRLDLFIDR-MVSQRACLEHAIAQTAGLS-GPVYELGLGNGRTYHHLRQHVQG-REIYVFER 72 (174)
T ss_dssp CCHHHHHHHH-HHHHHHHHHHHHHHTTTCC-SCEEEECCTTCHHHHHHHHHCCS-SCEEEEES
T ss_pred hhHHHHHHHH-HHHHHHHHHHHHHHhcCCC-CceEEecCCCChhHHHHHHhCCC-CcEEEEEe
Confidence 4445544332 2334443334444444333 46999999999999999999986 58999995
No 495
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=40.13 E-value=1e+02 Score=28.36 Aligned_cols=58 Identities=10% Similarity=0.098 Sum_probs=41.3
Q ss_pred EEEEECCCcChHHHHHHHHhCCCc----EEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 021397 113 HVLDLCAAPGAKLCMILDIIGDSG----SVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTT 173 (313)
Q Consensus 113 ~VLDlcagpG~kt~~la~~~~~~~----~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~ 173 (313)
+|+=+|| |+.+..+++.+...+ .|+..|.+..+++.+.+.+...+- .++..+..|+.+
T Consensus 3 kVlIiGa--GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~-~~~~~~~~D~~d 64 (405)
T 4ina_A 3 KVLQIGA--GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGY-GEIDITTVDADS 64 (405)
T ss_dssp EEEEECC--SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTC-CCCEEEECCTTC
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcC-CceEEEEecCCC
Confidence 5677777 678888877653333 899999999998888776655432 247777888754
No 496
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=39.81 E-value=64 Score=27.17 Aligned_cols=61 Identities=11% Similarity=0.014 Sum_probs=42.0
Q ss_pred CCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHH--HHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 111 GDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHR--LAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 111 g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~--l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
+..+|=.|+ +|+.+..+++.+. .+..|+.++.++.. ++.+.+.++..+. ++.++..|..+.
T Consensus 2 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~ 65 (258)
T 3a28_C 2 SKVAMVTGG-AQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQ--KAVFVGLDVTDK 65 (258)
T ss_dssp CCEEEEETT-TSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTC--CEEEEECCTTCH
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCC--cEEEEEccCCCH
Confidence 456666665 5677777776542 23579999998877 7766666655543 688899998754
No 497
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=39.73 E-value=36 Score=30.53 Aligned_cols=54 Identities=17% Similarity=0.166 Sum_probs=34.9
Q ss_pred cCCCCC-CEEEEECC--CcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCC
Q 021397 106 LNISAG-DHVLDLCA--APGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALG 161 (313)
Q Consensus 106 l~~~~g-~~VLDlca--gpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~ 161 (313)
.++++| ++||=.|+ +-|..+.++|+.++ .+|+++..+.+.++..++.++++|..
T Consensus 162 ~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~G--a~vi~~~~~~~~~~~~~~~~~~lGa~ 218 (364)
T 1gu7_A 162 VKLTPGKDWFIQNGGTSAVGKYASQIGKLLN--FNSISVIRDRPNLDEVVASLKELGAT 218 (364)
T ss_dssp SCCCTTTCEEEESCTTSHHHHHHHHHHHHHT--CEEEEEECCCTTHHHHHHHHHHHTCS
T ss_pred hccCCCCcEEEECCCCcHHHHHHHHHHHHCC--CEEEEEecCccccHHHHHHHHhcCCe
Confidence 368899 99998876 34555677787765 47777765555433333344567763
No 498
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=39.29 E-value=94 Score=25.53 Aligned_cols=60 Identities=13% Similarity=0.024 Sum_probs=42.7
Q ss_pred CEEEEECCCcChHHHHHHHHhC-CCcEEEE-EcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 112 DHVLDLCAAPGAKLCMILDIIG-DSGSVTG-VDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 112 ~~VLDlcagpG~kt~~la~~~~-~~~~V~a-vD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
.+|| +--|+|+.+.++++.+- .+..|++ .+.++..++.+.+.++..+. ++.++..|.++.
T Consensus 2 k~vl-VTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~ 63 (244)
T 1edo_A 2 PVVV-VTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGG--QAITFGGDVSKE 63 (244)
T ss_dssp CEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTC--EEEEEECCTTSH
T ss_pred CEEE-EeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC--cEEEEeCCCCCH
Confidence 3455 34466888888887653 2357888 58898888887777776663 688899998753
No 499
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Probab=39.24 E-value=43 Score=26.87 Aligned_cols=53 Identities=17% Similarity=-0.009 Sum_probs=38.5
Q ss_pred EEEEECCCcChHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 021397 113 HVLDLCAAPGAKLCMILDIIGDSGSVTGVDVARHRLAACRTLLQKYALGDRCRLFVADGTTF 174 (313)
Q Consensus 113 ~VLDlcagpG~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~~v~~~~~D~~~~ 174 (313)
+||=.| |+|+.+.++++.+... .|++++.++..++.+.+.+ + . .++.+|..+.
T Consensus 2 ~vlVtG-asg~iG~~la~~l~~~-~V~~~~r~~~~~~~~~~~~---~---~-~~~~~D~~~~ 54 (207)
T 2yut_A 2 RVLITG-ATGGLGGAFARALKGH-DLLLSGRRAGALAELAREV---G---A-RALPADLADE 54 (207)
T ss_dssp EEEEET-TTSHHHHHHHHHTTTS-EEEEECSCHHHHHHHHHHH---T---C-EECCCCTTSH
T ss_pred EEEEEc-CCcHHHHHHHHHHHhC-CEEEEECCHHHHHHHHHhc---c---C-cEEEeeCCCH
Confidence 344444 6789999999988777 9999999998877665543 1 1 6777887653
No 500
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=39.16 E-value=74 Score=26.80 Aligned_cols=61 Identities=10% Similarity=-0.032 Sum_probs=42.7
Q ss_pred CCEEEEECCCcChHHHHHHHHhC-CCcEEEEEcCCHHH-HHHHHHHHHHc-CCCCcEEEEecCCCCC
Q 021397 111 GDHVLDLCAAPGAKLCMILDIIG-DSGSVTGVDVARHR-LAACRTLLQKY-ALGDRCRLFVADGTTF 174 (313)
Q Consensus 111 g~~VLDlcagpG~kt~~la~~~~-~~~~V~avD~s~~~-l~~~~~~~~~~-g~~~~v~~~~~D~~~~ 174 (313)
|..||=.|+ +|+.+.++++.+. .+..|+.+|.++.. ++.+.+.+... +. ++.++..|..+.
T Consensus 4 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~ 67 (260)
T 1x1t_A 4 GKVAVVTGS-TSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGV--KVLYDGADLSKG 67 (260)
T ss_dssp TCEEEETTC-SSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTS--CEEEECCCTTSH
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCC--cEEEEECCCCCH
Confidence 566775554 5778888877653 33589999999887 77776666544 53 588888998753
Done!