BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 021402
         (313 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q7M761|OVCH2_MOUSE Ovochymase-2 OS=Mus musculus GN=Ovch2 PE=2 SV=1
          Length = 609

 Score = 35.4 bits (80), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 68/161 (42%), Gaps = 21/161 (13%)

Query: 122 YFVATKPIPEGSLVDRFLKGDDAFRLSRLKLIANIVQGPWIVKKAVGEQAICVIGR--AL 179
           YF     I  GS V+   KG   +++S  +   +I  G  I  + V   A C+  R  AL
Sbjct: 45  YFSLFSRIVGGSQVE---KGSYPWQVSLKQKQKHICGGTIISSQWVITAAHCMANRNIAL 101

Query: 180 SCNYCVGENFL-EVDMDIGSSMVAKAIVHLAFGYITTLTVDLAFLLESQTESELPEQILG 238
           + N   GE+ L + +    +  +   I+H  F     +  D+A L           ++ G
Sbjct: 102 TLNVTAGEHDLSQAEPGEQTLAIETIIIHPQFSTRKPMIYDIALL-----------KMAG 150

Query: 239 AFRFSELNPASACLVEPGSYGNAGSLQSSLPTRFWKSIGEG 279
            F+F +      CL EPG + NAG + +   T  W  + EG
Sbjct: 151 TFQFGQF-VRPVCLPEPGEHFNAGFICT---TAGWGRLSEG 187


>sp|Q90Y54|JAG1B_DANRE Protein jagged-1b OS=Danio rerio GN=jag1b PE=2 SV=1
          Length = 1213

 Score = 34.7 bits (78), Expect = 0.85,   Method: Composition-based stats.
 Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 16/92 (17%)

Query: 11  EWIKKVKSGGAVPYLEPDNCSNGWATPPGDMFMVRGPDYLSTKVKIPAGEYILKPLGFDW 70
           E+  +V S GA        CS G  + P     V G +  STK        I+ P  F W
Sbjct: 78  EYQSRVSSAGA--------CSFGTGSTP-----VLGGNKFSTKGTRSEKSRIVLPFSFAW 124

Query: 71  VKSYTKIGAVLNHQNNRVR---KAIEEAFPTG 99
            +SYT I   L+  N       K IE+A+ +G
Sbjct: 125 PRSYTLIVEALDFNNETASESGKLIEKAYHSG 156


>sp|Q9LTL8|C71BO_ARATH Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=CYP71B24 PE=2 SV=1
          Length = 498

 Score = 34.3 bits (77), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 26/104 (25%), Positives = 51/104 (49%), Gaps = 5/104 (4%)

Query: 72  KSYTKIGAVLNHQ-NNRVRKAIEEAFPTGDKPFVWAFNLQVPSKENYSAIAYFVATKPIP 130
           K + ++  +LNH  ++ ++ +IEE   T D+P +    L +  K+       F  T    
Sbjct: 236 KVFVEVDTLLNHIIDDHLKNSIEEI--THDRPDIIDSLLDMIRKQEQGD--SFKLTIDNL 291

Query: 131 EGSLVDRFLKGDDAFRLSRLKLIANIVQGPWIVKKAVGEQAICV 174
           +G + D +L G D   ++ +  +A +V+ P ++KK   E   C+
Sbjct: 292 KGIIQDIYLAGVDTSAITMIWAMAELVKNPRVMKKVQDEIRTCI 335


>sp|P27736|SSG1_WHEAT Granule-bound starch synthase 1, chloroplastic/amyloplastic
           OS=Triticum aestivum GN=WAXY PE=1 SV=1
          Length = 615

 Score = 32.0 bits (71), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 23/111 (20%)

Query: 87  RVRKAIEEAFPTGDKPFVWAFNLQVPSKENYSAIAYFVATKPIP---------------- 130
           R+ K++EE FPT  +  V  FN  +  +    A    V ++  P                
Sbjct: 450 RLLKSVEEKFPTKVRAVV-RFNAPLAHQMMAGADVLAVTSRFEPCGLIQLQGMRYGTPCA 508

Query: 131 ---EGSLVDRFLKGDDAFRLSRLKLIANIVQGPWIVKKAVG--EQAICVIG 176
               G LVD  ++G   F + RL +  N+V+ P  VKK V   ++A+ V+G
Sbjct: 509 CASTGGLVDTIVEGKTGFHMGRLSVDCNVVE-PADVKKVVTTLKRAVKVVG 558


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.317    0.136    0.416 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 129,675,681
Number of Sequences: 539616
Number of extensions: 5661416
Number of successful extensions: 10950
Number of sequences better than 100.0: 7
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 10949
Number of HSP's gapped (non-prelim): 8
length of query: 313
length of database: 191,569,459
effective HSP length: 117
effective length of query: 196
effective length of database: 128,434,387
effective search space: 25173139852
effective search space used: 25173139852
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)