Query 021405
Match_columns 312
No_of_seqs 127 out of 198
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 02:41:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021405.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021405hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF04882 Peroxin-3: Peroxin-3; 100.0 4.5E-82 9.7E-87 621.8 25.5 308 1-309 53-432 (432)
2 KOG4444 Peroxisomal assembly p 100.0 5.5E-66 1.2E-70 473.2 25.3 294 1-312 54-359 (359)
3 KOG4444 Peroxisomal assembly p 58.7 8.4 0.00018 37.0 2.8 36 120-159 195-230 (359)
4 KOG0506 Glutaminase (contains 36.8 63 0.0014 32.9 5.1 70 212-281 120-214 (622)
5 PRK01381 Trp operon repressor; 30.7 35 0.00077 27.2 1.9 41 133-173 6-46 (99)
6 COG3114 CcmD Heme exporter pro 29.8 1.6E+02 0.0034 21.7 4.9 35 69-103 16-50 (67)
7 PF10428 SOG2: RAM signalling 27.3 2.6E+02 0.0057 28.1 7.9 68 3-75 303-402 (445)
8 PF06336 Corona_5a: Coronaviru 21.7 1.8E+02 0.0039 20.8 3.9 25 65-94 4-28 (65)
9 PRK10304 ferritin; Provisional 20.3 1.1E+02 0.0023 26.5 3.1 35 119-153 19-53 (165)
10 PF14293 YWFCY: YWFCY protein 18.6 1.2E+02 0.0026 22.0 2.5 14 63-76 10-23 (61)
No 1
>PF04882 Peroxin-3: Peroxin-3; InterPro: IPR006966 Peroxin 3 (Pex3p), also known as Peroxisomal biogenesis factor 3, has been identified and characterised as a peroxisomal membrane protein in yeasts and mammals []. Two putative peroxisomal membrane-bound Pex3p homologues have also been found in Arabidopsis thaliana []. They possess a membrane peroxisomal targeting signal. Pex3p is an integral membrane protein of peroxisomes, exposing its N- and C-terminal parts to the cytosol []. Peroxin is involved in peroxisome biosynthesis and integrity; it assembles membrane vesicles before the matrix proteins are translocated. In humans, defects in PEX3 are the cause of peroxisome biogenesis disorders [], which include Zellweger syndrome (ZWS), neonatal adrenoleukodystrophy (NALD), infantile Refsum disease (IRD), and classical rhizomelic chondrodysplasia punctata (RCDP). These are peroxisomal disorders that are the result of proteins failing to be imported into the peroxisome.; GO: 0007031 peroxisome organization, 0005779 integral to peroxisomal membrane; PDB: 3MK4_A 3AJB_A.
Probab=100.00 E-value=4.5e-82 Score=621.81 Aligned_cols=308 Identities=32% Similarity=0.500 Sum_probs=242.7
Q ss_pred ChhhHHHHhhhhHHhHHHHHHHHHHHHHHHhcCchHHHHHHhcCCCCCC-------------------------------
Q 021405 1 MQAHYEEVQRIADATTLPHAMHYLSIRIAEELDLSPLTDKLLRGKEQPY------------------------------- 49 (312)
Q Consensus 1 l~~~Fe~~Q~~c~~T~l~~llp~L~~~i~~~ld~e~i~~~Lk~~K~~~~------------------------------- 49 (312)
+||||||||+||++|++ ++||+|+++|++++|+|+||++||++|.++.
T Consensus 53 ~~r~Feq~q~~c~~tv~-~llp~l~~~i~~~ld~e~i~~~L~~~k~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 131 (432)
T PF04882_consen 53 LRRRFEQTQRDCDFTVL-ALLPTLSERILEELDVEEITEELKQKKAQRKARQAAQSDSESSDSELTSDNLSSASEANESS 131 (432)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHS-HHHHHHHHCT-------------------------------------
T ss_pred ccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 58999999999999997 8999999999999999999999999987432
Q ss_pred ----CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCC----------CCCCC
Q 021405 50 ----TLSSSEKLELWDRLKILSFTKLVVALWAVTMVSLYIRVQVNILGRHLYIDTARGLGSSDLP----------EDADL 115 (312)
Q Consensus 50 ----~l~~~~K~eLW~eLKi~sftR~~t~iY~~slL~ll~rvQLNiLgr~~Yl~s~~~~~~~~~~----------~~~~~ 115 (312)
..++++|+||||||||+||||++|++|++|||+|+||+||||||||.|++|+...+++... .....
T Consensus 132 ~~~~~~~~~~K~eLW~eLKi~sftR~vt~iY~~slL~LltRvQLNILGR~~Yl~S~~~~a~~~~~~~~~~~~~~~~~~~~ 211 (432)
T PF04882_consen 132 SKSSPLSPKSKLELWNELKIKSFTRTVTLIYALSLLTLLTRVQLNILGRRLYLDSVISLASEQENSNSSLISLESSSARG 211 (432)
T ss_dssp --------SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----HHTSSSSS---SS---------
T ss_pred cccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCcccccccccccccc
Confidence 1348999999999999999999999999999999999999999999999998765433221 11234
Q ss_pred CChHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCcccCHHHHHHHHHHHHHHHhc--C--C--Ccccccccc
Q 021405 116 IDRDDQQKFLASVDYLANYGMQAMISNVQAAADEALKGKQLRDIFNTVVLHETFMQILEVFMS--M--G--SPHQWVDFL 189 (312)
Q Consensus 116 ~~~~~eq~fLs~s~~ll~~G~~~l~~~V~~~V~~v~~~~~lk~~ls~~~l~~l~~~i~~~~~~--~--~--~~~~~~~~L 189 (312)
.+.++||+||++||||+|+||.+++++|+++|+++|++++||+.+|++||++++++||..++. . + ..++|++||
T Consensus 212 ~~~~~eq~fLs~swwLL~~Gw~~l~~~Ve~aV~~vf~~~~lkd~lsl~e~~~ll~~Ir~~ve~~~~~~~~~~~~~~~~~L 291 (432)
T PF04882_consen 212 VDYETEQKFLSLSWWLLNRGWKELIERVEEAVEEVFGSISLKDELSLEEFSELLWQIRKRVESSSDTSDSRPRSNWLSYL 291 (432)
T ss_dssp --HHHHHHHHGGGHHHHTHHHHHHHHHHHHHHHHHHTTS-TT-EEEHHHHHHHHHHHHHHHHT------------CHHHC
T ss_pred ccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcCcccCHHHHHHHHHHHHHHHHhhcCCccccchhhHHHhh
Confidence 568999999999999999999999999999999999999999999999999999999999987 1 1 246799999
Q ss_pred cccchh-hhhhhhcC---CCCCcccCchhHHHHHHHHHHHhhcCHhHHHHHHHHHHHHHHHHHHHHHHhcCC--------
Q 021405 190 MPQDIR-FYKLVTAS---GHDETTLSGATKFDELMVETRAVLSSAEYTSVVDMSFKAAVDALIDEMRVQSGG-------- 257 (312)
Q Consensus 190 lP~~~~-~~~~~~~~---~~~~~~~~~~~~l~~Ll~ET~d~leS~~f~~Vl~~~l~~~f~~l~~~~~~~~~~-------- 257 (312)
||+... .+++.+++ ++....+.+++.|++|++||+|+||||+|.+|++.|+|++|+.+++++.+.+++
T Consensus 292 LP~~~~e~~~L~~~~~~~~~~~~~~~~~~~l~~Ll~ET~d~leS~~f~~Vl~~~l~~~f~~l~d~l~~~~~~~~~~~~~~ 371 (432)
T PF04882_consen 292 LPPEEEEDFVLQQTGDNPSSLSSLPQDDSILRQLLDETRDVLESPDFSHVLESCLDEGFSTLMDNLEASFGSKSPSSPQS 371 (432)
T ss_dssp S----TTS-GGGTS-------TT--CCHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHCCG----------
T ss_pred CCCCchhHHHHHhcccccccccCCCCCcHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCc
Confidence 996543 45555543 222234578899999999999999999999999999999999999999876622
Q ss_pred ---------CCCCCCcchhhhhhhhhhccccccCCCchHHHHHHhChhhHHHHHHHHhccC
Q 021405 258 ---------SLISGMPLAKLVPRVVQMSPSLLAEPSNNRIIQVIRTIPEVELFFTLLYANM 309 (312)
Q Consensus 258 ---------~~~~~~~LAkllp~v~~~~~~l~~~~~~n~yl~~l~~~~el~~fsA~vYs~~ 309 (312)
.++.++||||+||++++|+|.++.++.||+|++.|.++++|++|||+||+||
T Consensus 372 ~~~~~~~~~~~~~~~~LAklLp~l~~q~~~i~~~~~~N~yl~~l~~v~eL~~fsA~VYsnF 432 (432)
T PF04882_consen 372 DLDQEEEVDIPKKKIPLAKLLPILNRQSHVILNGPMPNEYLQRLNSVPELEDFSASVYSNF 432 (432)
T ss_dssp -------------EEEHHHHHHHHHTTHHHHT-TT-TTCHHHHHHT-HHHHHHHHHHHHHH
T ss_pred cCCcccccCCCCCcchHHHHHHHHHHHHHHHhcCCChhHHHHHHHccHHHHHHhHHHhhcC
Confidence 1235799999999999999999987569999999999999999999999997
No 2
>KOG4444 consensus Peroxisomal assembly protein PEX3 [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.5e-66 Score=473.24 Aligned_cols=294 Identities=30% Similarity=0.478 Sum_probs=259.6
Q ss_pred ChhhHHHHhhhhHHhHHHHHHHHHHHHHHHhcCchHHHHHHhcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021405 1 MQAHYEEVQRIADATTLPHAMHYLSIRIAEELDLSPLTDKLLRGKEQPYTLSSSEKLELWDRLKILSFTKLVVALWAVTM 80 (312)
Q Consensus 1 l~~~Fe~~Q~~c~~T~l~~llp~L~~~i~~~ld~e~i~~~Lk~~K~~~~~l~~~~K~eLW~eLKi~sftR~~t~iY~~sl 80 (312)
+++||||||++||+||+ .++|+++.+|.+++|+|+|+++||++ . .++|++|+||||||||.||||+++.+|++||
T Consensus 54 rk~hFEStqrtcd~til-~llp~l~~~i~eeldvdsi~eqLkqk-~---~Ltp~~KleLWeeLKI~sftrl~~~vysvsm 128 (359)
T KOG4444|consen 54 RKYHFESTQRTCDQTIL-ELLPVLRMAINEELDVDSIVEQLKQK-N---QLTPKNKLELWEELKIKSFTRLVTVVYSVSM 128 (359)
T ss_pred HHHHHHhhhhHHHHHHH-HHHHHHHHHHHHHcCHHHHHHHHhhC-C---CCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 37899999999999998 69999999999999999999999994 3 3789999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCCCCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCccc
Q 021405 81 VSLYIRVQVNILGRHLYIDTARGLGSSDLPEDADLIDRDDQQKFLASVDYLANYGMQAMISNVQAAADEALKGKQLRDIF 160 (312)
Q Consensus 81 L~ll~rvQLNiLgr~~Yl~s~~~~~~~~~~~~~~~~~~~~eq~fLs~s~~ll~~G~~~l~~~V~~~V~~v~~~~~lk~~l 160 (312)
|.+++|+||||||||.|+|+++..+. .+.++.+.||+|||.+.||..+|+..++..++.+|.+|+++.++|+.+
T Consensus 129 Lvl~lRvQlNILgr~iYlD~a~~l~~------v~l~~~dlqqqfls~i~~l~tdam~~la~~ik~~~qeVlk~~qlk~sl 202 (359)
T KOG4444|consen 129 LVLLLRVQLNILGRYIYLDSAIKLKM------VQLNCNDLQQQFLSSITHLWTDAMVMLAKKIKKEVQEVLKNEQLKLSL 202 (359)
T ss_pred HHHHHHHHHHHhcchhhHHHHHhhcc------cccCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccHHHHh
Confidence 99999999999999999999998542 345678999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhcCCCcccccc-cccccchhhhhhhhcCCCCCcccCchhHHHHHHHHHHHhhcCHhHHHHHHHH
Q 021405 161 NTVVLHETFMQILEVFMSMGSPHQWVD-FLMPQDIRFYKLVTASGHDETTLSGATKFDELMVETRAVLSSAEYTSVVDMS 239 (312)
Q Consensus 161 s~~~l~~l~~~i~~~~~~~~~~~~~~~-~LlP~~~~~~~~~~~~~~~~~~~~~~~~l~~Ll~ET~d~leS~~f~~Vl~~~ 239 (312)
|+-++++.+++|++.++..++|++|.+ |++|+.+.......++..| .+.+...+|.-||+++|+|++|+.|++.|
T Consensus 203 S~~~Leq~~~qi~n~~e~~~dp~h~~dkylm~~qnt~ls~~as~~~d----~dvst~f~l~~Etrq~L~st~~stvle~s 278 (359)
T KOG4444|consen 203 SLWDLEQGWLQITNQIEIEFDPIHWRDKYLMPFQNTPLSFLASGTSD----ADVSTSFHLNTETRQCLESTAFSTVLESS 278 (359)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCCchHhhhcCCCCCCchhhHhccCCh----HHHHHHHHHhHHHHHHhcchhHHHHHHHH
Confidence 999999999999999999889999998 9999865432222233332 23356667777999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCC--------C---CCCCCcchhhhhhhhhhccccccCCCchHHHHHHhChhhHHHHHHHHhcc
Q 021405 240 FKAAVDALIDEMRVQSGG--------S---LISGMPLAKLVPRVVQMSPSLLAEPSNNRIIQVIRTIPEVELFFTLLYAN 308 (312)
Q Consensus 240 l~~~f~~l~~~~~~~~~~--------~---~~~~~~LAkllp~v~~~~~~l~~~~~~n~yl~~l~~~~el~~fsA~vYs~ 308 (312)
++++ ++++++..+.+ . ....+||||++|+++++.+.++++|++|+|+|.+..++++++|+|+||+|
T Consensus 279 ln~~---~~~~~g~~t~~~e~~~q~gn~~~~~v~~alAk~ip~ie~l~~~~tseps~n~flq~l~~~e~~kdl~anvye~ 355 (359)
T KOG4444|consen 279 LNES---IMNKVGIKTIAKEKPLQEGNQQYQMVVLALAKKIPIIEGLQTTATSEPSGNEFLQTLDSVEPLKDLSANVYEN 355 (359)
T ss_pred Hhhh---hhccccceeecccCcccccchHHHHHHHHHHHhhhhhhccccccccCCCcchHHHHHHhchhhhHHHhhhhhh
Confidence 9998 67777655411 1 13468999999999999999999988899999999999999999999999
Q ss_pred CCCC
Q 021405 309 MSDS 312 (312)
Q Consensus 309 ~~~~ 312 (312)
|+-+
T Consensus 356 f~~~ 359 (359)
T KOG4444|consen 356 FSVS 359 (359)
T ss_pred ccCC
Confidence 9864
No 3
>KOG4444 consensus Peroxisomal assembly protein PEX3 [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=58.72 E-value=8.4 Score=36.96 Aligned_cols=36 Identities=14% Similarity=0.099 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCcc
Q 021405 120 DQQKFLASVDYLANYGMQAMISNVQAAADEALKGKQLRDI 159 (312)
Q Consensus 120 ~eq~fLs~s~~ll~~G~~~l~~~V~~~V~~v~~~~~lk~~ 159 (312)
+++.++++|||-|++||. .|...++..+.+.+.++.
T Consensus 195 ~~qlk~slS~~~Leq~~~----qi~n~~e~~~dp~h~~dk 230 (359)
T KOG4444|consen 195 NEQLKLSLSLWDLEQGWL----QITNQIEIEFDPIHWRDK 230 (359)
T ss_pred cccHHHHhhHHHHHHHHH----HHHHHHHhcCCCCchHhh
Confidence 689999999999999999 566677788888888774
No 4
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=36.75 E-value=63 Score=32.93 Aligned_cols=70 Identities=17% Similarity=0.216 Sum_probs=44.8
Q ss_pred chhHHHHHHHHHHHhhc------------CHhHHHHHHHHHHHHHHHHH------------HHHHHhcCC-CCCCCCcch
Q 021405 212 GATKFDELMVETRAVLS------------SAEYTSVVDMSFKAAVDALI------------DEMRVQSGG-SLISGMPLA 266 (312)
Q Consensus 212 ~~~~l~~Ll~ET~d~le------------S~~f~~Vl~~~l~~~f~~l~------------~~~~~~~~~-~~~~~~~LA 266 (312)
+++.|+++|+|.+|+.. -+.|...+..|+.-.-.++- ..+.+.|.. ....+-.+|
T Consensus 120 sDPRLk~mMd~mKd~dq~~~e~S~gw~LdKDlFKkcI~sSI~lvSqALrkqmVIPdw~~Fts~I~tIFEscke~seG~vA 199 (622)
T KOG0506|consen 120 SDPRLKDMMDEMKDVDQEENESSSGWLLDKDLFKKCIFSSIVLVSQALRKQMVIPDWEEFTSHIDTIFESCKESSEGKVA 199 (622)
T ss_pred CCchHHHHHHHHHHHHhhhcccccceeecHHHHHHhhccchhHHHHHHhcCccCCcHHHHHHHHHHHHHHHHhcCCccHH
Confidence 34899999999999884 23566666655554443332 223322310 012345799
Q ss_pred hhhhhhhhhcccccc
Q 021405 267 KLVPRVVQMSPSLLA 281 (312)
Q Consensus 267 kllp~v~~~~~~l~~ 281 (312)
..||+++++++.+++
T Consensus 200 ~YIPQLar~sPdlW~ 214 (622)
T KOG0506|consen 200 TYIPQLARQSPDLWG 214 (622)
T ss_pred HhhHHHhccCCccce
Confidence 999999999998774
No 5
>PRK01381 Trp operon repressor; Provisional
Probab=30.70 E-value=35 Score=27.21 Aligned_cols=41 Identities=15% Similarity=0.049 Sum_probs=36.0
Q ss_pred HhhHHHHHHHHHHHHHHHhcCCCCCcccCHHHHHHHHHHHH
Q 021405 133 NYGMQAMISNVQAAADEALKGKQLRDIFNTVVLHETFMQIL 173 (312)
Q Consensus 133 ~~G~~~l~~~V~~~V~~v~~~~~lk~~ls~~~l~~l~~~i~ 173 (312)
+.||..+++.++.+.....-..-+.+.+|.+|...+-.+++
T Consensus 6 ~~~W~~~v~ll~~a~~~~~~~~~l~~llTp~Er~al~~R~~ 46 (99)
T PRK01381 6 NQEWQRFVDLLKQAFEEDLHLPLLTLLLTPDEREALGTRVR 46 (99)
T ss_pred hhhHHHHHHHHHHhccHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 47999999999999999888888888999999999888753
No 6
>COG3114 CcmD Heme exporter protein D [Intracellular trafficking and secretion]
Probab=29.79 E-value=1.6e+02 Score=21.75 Aligned_cols=35 Identities=17% Similarity=0.151 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 021405 69 TKLVVALWAVTMVSLYIRVQVNILGRHLYIDTARG 103 (312)
Q Consensus 69 tR~~t~iY~~slL~ll~rvQLNiLgr~~Yl~s~~~ 103 (312)
.=.|-+.|++|+|.+..=+=-+++-|+.||..+..
T Consensus 16 afyVWlA~~~tll~l~~l~v~sv~qrr~iL~~v~r 50 (67)
T COG3114 16 AFYVWLAVGMTLLPLAVLVVHSVLQRRAILRGVAR 50 (67)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34578899999999999999999999999998754
No 7
>PF10428 SOG2: RAM signalling pathway protein; InterPro: IPR019487 The RAM signalling pathway regulates Ace2p transcription factor activity and cellular morphogenesis in Saccharomyces cerevisiae (Baker's yeast), and is thought to be conserved amongst eukaryotes []. This entry is found in one of the components of this pathway, the leucine-rich repeat-containing protein SOG2.
Probab=27.29 E-value=2.6e+02 Score=28.14 Aligned_cols=68 Identities=25% Similarity=0.369 Sum_probs=41.2
Q ss_pred hhHHHHhhhhHHhHHHHHHHHHHHHHHHhcC-------------------------chHHHHHHhcC----C---CCCCC
Q 021405 3 AHYEEVQRIADATTLPHAMHYLSIRIAEELD-------------------------LSPLTDKLLRG----K---EQPYT 50 (312)
Q Consensus 3 ~~Fe~~Q~~c~~T~l~~llp~L~~~i~~~ld-------------------------~e~i~~~Lk~~----K---~~~~~ 50 (312)
+-|.+.+..|+. ++ ..+|.|.+.|.+.+. .-++++.||.. | +.+ .
T Consensus 303 kl~~~L~~at~~-a~-~vlp~l~~~~~~~~~~a~~~~~~~~~~~~k~k~L~~~C~~~~~~T~~L~~rLs~ik~~~~ep-~ 379 (445)
T PF10428_consen 303 KLYLALQNATDL-AL-HVLPQLTSQFSKSARAAAQQRAIPPSLVQKWKELISKCNSAIDQTERLKSRLSTIKNQLKEP-G 379 (445)
T ss_pred HHHHHHHHHHHH-HH-HHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-C
Confidence 447778888886 43 567888887776321 22344444432 2 111 1
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHH
Q 021405 51 LSSSEKLELWDRLKILSFTKLVVAL 75 (312)
Q Consensus 51 l~~~~K~eLW~eLKi~sftR~~t~i 75 (312)
....+|.+.|++ +.+|-+.+..+
T Consensus 380 ~~~~~~~~fwe~--~~~Fiks~i~l 402 (445)
T PF10428_consen 380 GGIREQKEFWED--CNSFIKSWISL 402 (445)
T ss_pred CCccccHHHHHH--HHHHHHHHHHH
Confidence 236889999999 77788865544
No 8
>PF06336 Corona_5a: Coronavirus 5a protein; InterPro: IPR009404 This family consists of several Coronavirus 5a proteins. The function of this family is unknown [].
Probab=21.72 E-value=1.8e+02 Score=20.80 Aligned_cols=25 Identities=20% Similarity=0.509 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021405 65 ILSFTKLVVALWAVTMVSLYIRVQVNILGR 94 (312)
Q Consensus 65 i~sftR~~t~iY~~slL~ll~rvQLNiLgr 94 (312)
..||.|+|.+.|-.-+|+ ||-.|.|
T Consensus 4 ltsfgra~iscykslllt-----qlrvldr 28 (65)
T PF06336_consen 4 LTSFGRAFISCYKSLLLT-----QLRVLDR 28 (65)
T ss_pred HHHHhHHHHHHHHHHHHH-----HHHHHHH
Confidence 579999999999854443 6767766
No 9
>PRK10304 ferritin; Provisional
Probab=20.25 E-value=1.1e+02 Score=26.48 Aligned_cols=35 Identities=6% Similarity=0.044 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Q 021405 119 DDQQKFLASVDYLANYGMQAMISNVQAAADEALKG 153 (312)
Q Consensus 119 ~~eq~fLs~s~~ll~~G~~~l~~~V~~~V~~v~~~ 153 (312)
..-+.||+.+-|+=+.|++.+....+....+..++
T Consensus 19 ~As~~Yl~ma~~~~~~gl~g~A~~f~~qs~EE~~H 53 (165)
T PRK10304 19 YSSLLYQQMSAWCSYHTFEGAAAFLRRHAQEEMTH 53 (165)
T ss_pred HHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHH
Confidence 36788999999999999999999999998887543
No 10
>PF14293 YWFCY: YWFCY protein
Probab=18.57 E-value=1.2e+02 Score=22.03 Aligned_cols=14 Identities=29% Similarity=0.598 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHH
Q 021405 63 LKILSFTKLVVALW 76 (312)
Q Consensus 63 LKi~sftR~~t~iY 76 (312)
=||..|+|+++.+.
T Consensus 10 ~KImdf~R~iSI~~ 23 (61)
T PF14293_consen 10 RKIMDFMRAISILF 23 (61)
T ss_pred HHHHHHHHHHHHHH
Confidence 38999999887653
Done!