Query 021410
Match_columns 312
No_of_seqs 256 out of 1741
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 02:44:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021410.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021410hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02157 3-hydroxyisobutyryl-C 100.0 4.9E-64 1.1E-68 464.2 31.1 312 1-312 49-360 (401)
2 PLN02988 3-hydroxyisobutyryl-C 100.0 2.1E-63 4.6E-68 458.7 31.4 312 1-312 21-332 (381)
3 PLN02851 3-hydroxyisobutyryl-C 100.0 2.4E-63 5.3E-68 459.2 31.6 312 1-312 54-365 (407)
4 PLN02874 3-hydroxyisobutyryl-C 100.0 2.6E-60 5.6E-65 440.0 32.3 308 1-310 23-330 (379)
5 KOG1684 Enoyl-CoA hydratase [L 100.0 1.3E-58 2.7E-63 405.4 26.4 309 1-312 50-361 (401)
6 PRK05617 3-hydroxyisobutyryl-C 100.0 3.5E-58 7.6E-63 421.0 29.9 300 1-309 15-317 (342)
7 PRK05980 enoyl-CoA hydratase; 100.0 8.8E-56 1.9E-60 392.7 23.6 241 1-311 15-257 (260)
8 PLN02600 enoyl-CoA hydratase 100.0 2E-55 4.2E-60 388.1 23.1 237 1-311 7-245 (251)
9 PRK06143 enoyl-CoA hydratase; 100.0 3.9E-55 8.5E-60 387.1 22.5 236 1-311 19-256 (256)
10 PRK09120 p-hydroxycinnamoyl Co 100.0 3.7E-55 8.1E-60 390.9 22.3 241 1-311 20-264 (275)
11 PLN02664 enoyl-CoA hydratase/d 100.0 4.8E-55 1E-59 390.5 22.8 241 1-311 20-269 (275)
12 KOG1680 Enoyl-CoA hydratase [L 100.0 6.9E-56 1.5E-60 377.3 15.4 235 1-311 49-284 (290)
13 PRK06142 enoyl-CoA hydratase; 100.0 6.9E-55 1.5E-59 389.3 22.6 241 1-311 18-267 (272)
14 PRK05862 enoyl-CoA hydratase; 100.0 7.4E-55 1.6E-59 386.0 21.9 235 1-311 16-251 (257)
15 PRK09076 enoyl-CoA hydratase; 100.0 1.4E-54 2.9E-59 384.4 23.5 236 1-311 15-252 (258)
16 PRK07260 enoyl-CoA hydratase; 100.0 6.9E-55 1.5E-59 385.8 21.5 241 1-311 14-255 (255)
17 PRK08150 enoyl-CoA hydratase; 100.0 1.3E-54 2.7E-59 383.6 22.7 235 1-311 14-249 (255)
18 PRK09674 enoyl-CoA hydratase-i 100.0 9.1E-55 2E-59 384.9 21.6 235 1-311 14-249 (255)
19 PRK06563 enoyl-CoA hydratase; 100.0 1E-54 2.2E-59 384.7 21.0 237 1-311 11-249 (255)
20 TIGR02280 PaaB1 phenylacetate 100.0 1.7E-54 3.7E-59 383.5 22.4 239 1-311 11-250 (256)
21 PRK07657 enoyl-CoA hydratase; 100.0 2.1E-54 4.6E-59 383.7 22.9 237 1-311 16-254 (260)
22 PRK05809 3-hydroxybutyryl-CoA 100.0 2E-54 4.4E-59 384.0 22.7 237 1-311 16-254 (260)
23 PRK07799 enoyl-CoA hydratase; 100.0 2.2E-54 4.7E-59 384.3 22.8 239 1-311 17-257 (263)
24 PRK08258 enoyl-CoA hydratase; 100.0 1.9E-54 4.1E-59 387.1 22.5 241 1-311 29-271 (277)
25 PRK08140 enoyl-CoA hydratase; 100.0 2.2E-54 4.8E-59 384.1 22.4 240 1-311 16-256 (262)
26 PRK08139 enoyl-CoA hydratase; 100.0 3E-54 6.6E-59 383.5 22.8 237 1-311 23-260 (266)
27 PRK08138 enoyl-CoA hydratase; 100.0 2.6E-54 5.7E-59 383.2 22.3 235 1-311 20-255 (261)
28 PRK06127 enoyl-CoA hydratase; 100.0 3.1E-54 6.7E-59 384.2 22.5 239 1-311 23-263 (269)
29 PRK09245 enoyl-CoA hydratase; 100.0 2.7E-54 5.8E-59 384.4 21.9 241 1-311 15-260 (266)
30 PRK07658 enoyl-CoA hydratase; 100.0 3.5E-54 7.6E-59 381.9 22.0 237 1-311 14-251 (257)
31 PRK07511 enoyl-CoA hydratase; 100.0 5E-54 1.1E-58 381.5 22.5 240 1-311 15-255 (260)
32 PRK08252 enoyl-CoA hydratase; 100.0 9E-54 2E-58 378.3 22.0 233 1-311 15-248 (254)
33 PRK07468 enoyl-CoA hydratase; 100.0 9.2E-54 2E-58 379.9 22.0 239 1-311 17-256 (262)
34 PRK05995 enoyl-CoA hydratase; 100.0 9E-54 1.9E-58 380.3 21.6 239 1-311 16-256 (262)
35 PRK06023 enoyl-CoA hydratase; 100.0 7.3E-54 1.6E-58 378.2 19.8 233 1-309 18-251 (251)
36 PRK05674 gamma-carboxygeranoyl 100.0 1.1E-53 2.5E-58 379.6 20.9 239 1-311 18-258 (265)
37 PRK05981 enoyl-CoA hydratase; 100.0 1.5E-53 3.2E-58 379.6 21.6 241 1-311 16-260 (266)
38 PRK06494 enoyl-CoA hydratase; 100.0 2.2E-53 4.7E-58 376.9 21.7 234 1-311 16-253 (259)
39 PRK05870 enoyl-CoA hydratase; 100.0 1.4E-53 2.9E-58 376.1 20.1 233 1-309 15-249 (249)
40 PRK07659 enoyl-CoA hydratase; 100.0 1.8E-53 4E-58 377.6 21.0 236 1-311 18-254 (260)
41 PRK07938 enoyl-CoA hydratase; 100.0 3.9E-53 8.4E-58 372.8 22.2 234 1-311 14-248 (249)
42 TIGR01929 menB naphthoate synt 100.0 2.9E-53 6.3E-58 375.9 21.2 237 1-311 15-253 (259)
43 PRK05864 enoyl-CoA hydratase; 100.0 3.4E-53 7.4E-58 378.8 21.6 241 1-311 22-269 (276)
44 PRK06210 enoyl-CoA hydratase; 100.0 2.6E-53 5.6E-58 379.3 20.7 241 1-311 18-266 (272)
45 PRK07327 enoyl-CoA hydratase; 100.0 4.3E-53 9.4E-58 376.6 22.0 235 1-311 24-262 (268)
46 PLN02888 enoyl-CoA hydratase 100.0 4.4E-53 9.6E-58 375.6 21.1 236 1-311 22-258 (265)
47 PRK06688 enoyl-CoA hydratase; 100.0 3.7E-53 8E-58 375.9 20.6 236 1-311 17-253 (259)
48 COG1024 CaiD Enoyl-CoA hydrata 100.0 8.2E-53 1.8E-57 373.1 22.5 236 1-311 17-254 (257)
49 TIGR03210 badI 2-ketocyclohexa 100.0 5.9E-53 1.3E-57 373.3 20.8 234 1-311 14-250 (256)
50 PRK03580 carnitinyl-CoA dehydr 100.0 8.4E-53 1.8E-57 373.5 21.2 235 1-311 15-255 (261)
51 PRK06495 enoyl-CoA hydratase; 100.0 1.2E-52 2.5E-57 371.8 21.4 235 1-311 16-251 (257)
52 PRK08259 enoyl-CoA hydratase; 100.0 7.2E-53 1.6E-57 372.2 19.3 234 1-311 15-249 (254)
53 PF00378 ECH: Enoyl-CoA hydrat 100.0 2.8E-53 6.1E-58 373.9 16.5 235 1-309 10-245 (245)
54 PRK06072 enoyl-CoA hydratase; 100.0 2.4E-52 5.3E-57 367.8 22.3 231 1-311 12-242 (248)
55 PRK06144 enoyl-CoA hydratase; 100.0 1.6E-52 3.5E-57 371.7 21.2 234 1-311 20-256 (262)
56 TIGR03189 dienoyl_CoA_hyt cycl 100.0 2.4E-52 5.2E-57 368.1 21.7 231 1-311 13-245 (251)
57 PRK07509 enoyl-CoA hydratase; 100.0 2.4E-52 5.2E-57 371.2 21.9 238 1-311 15-257 (262)
58 PRK07396 dihydroxynaphthoic ac 100.0 3.1E-52 6.7E-57 371.9 21.6 237 1-311 25-263 (273)
59 PRK08260 enoyl-CoA hydratase; 100.0 2.9E-52 6.2E-57 376.3 21.6 240 1-311 16-272 (296)
60 PRK07827 enoyl-CoA hydratase; 100.0 6.1E-52 1.3E-56 368.0 22.9 238 1-311 18-255 (260)
61 PRK11423 methylmalonyl-CoA dec 100.0 3.4E-52 7.3E-57 369.3 20.6 235 1-311 16-255 (261)
62 PLN03214 probable enoyl-CoA hy 100.0 2.6E-52 5.6E-57 372.7 19.2 238 1-311 24-265 (278)
63 PRK07854 enoyl-CoA hydratase; 100.0 2E-51 4.3E-56 360.7 22.0 225 1-311 12-237 (243)
64 PLN02921 naphthoate synthase 100.0 2.7E-51 5.9E-56 372.1 22.0 237 1-311 79-317 (327)
65 PRK07110 polyketide biosynthes 100.0 3.7E-51 8E-56 360.4 21.6 229 1-306 17-246 (249)
66 PRK12478 enoyl-CoA hydratase; 100.0 3.1E-51 6.8E-56 368.9 18.9 237 1-311 17-275 (298)
67 PRK08321 naphthoate synthase; 100.0 8.2E-51 1.8E-55 367.2 21.0 240 1-311 37-292 (302)
68 PRK06190 enoyl-CoA hydratase; 100.0 1.7E-50 3.7E-55 357.3 21.5 219 1-292 16-235 (258)
69 PRK07112 polyketide biosynthes 100.0 2.7E-50 5.8E-55 356.2 21.3 233 1-311 16-249 (255)
70 TIGR03222 benzo_boxC benzoyl-C 100.0 7E-49 1.5E-53 375.2 21.3 237 1-311 270-538 (546)
71 PRK05869 enoyl-CoA hydratase; 100.0 1.8E-48 3.9E-53 337.2 19.9 200 1-272 20-220 (222)
72 PRK11730 fadB multifunctional 100.0 2.6E-48 5.6E-53 386.4 22.6 277 1-311 19-298 (715)
73 PRK08184 benzoyl-CoA-dihydrodi 100.0 2.5E-48 5.4E-53 372.6 20.9 237 1-311 274-542 (550)
74 TIGR03200 dearomat_oah 6-oxocy 100.0 3E-47 6.5E-52 342.7 23.7 272 1-309 40-328 (360)
75 PRK08290 enoyl-CoA hydratase; 100.0 1.4E-47 3E-52 343.9 20.2 222 1-291 16-257 (288)
76 KOG1679 Enoyl-CoA hydratase [L 100.0 1.4E-48 3.1E-53 319.3 11.9 241 1-311 43-285 (291)
77 PRK08788 enoyl-CoA hydratase; 100.0 9E-47 1.9E-51 336.7 21.9 236 1-307 29-274 (287)
78 KOG1681 Enoyl-CoA isomerase [L 100.0 1.2E-47 2.5E-52 316.7 11.5 241 2-311 35-285 (292)
79 TIGR02440 FadJ fatty oxidation 100.0 5.1E-46 1.1E-50 369.1 23.7 270 1-310 13-289 (699)
80 PRK08272 enoyl-CoA hydratase; 100.0 3.4E-46 7.3E-51 337.7 20.3 203 1-273 22-246 (302)
81 PRK06213 enoyl-CoA hydratase; 100.0 2.6E-46 5.6E-51 325.9 18.3 212 1-287 15-228 (229)
82 PRK11154 fadJ multifunctional 100.0 6.1E-46 1.3E-50 369.4 22.0 270 1-310 18-294 (708)
83 TIGR02437 FadB fatty oxidation 100.0 7E-45 1.5E-49 361.1 21.1 277 1-311 19-298 (714)
84 KOG0016 Enoyl-CoA hydratase/is 100.0 8.6E-44 1.9E-48 300.5 17.3 241 1-311 19-264 (266)
85 PLN02267 enoyl-CoA hydratase/i 100.0 4.1E-43 8.8E-48 307.0 18.6 177 1-180 12-193 (239)
86 TIGR02441 fa_ox_alpha_mit fatt 100.0 4E-43 8.6E-48 349.2 20.9 286 1-311 25-322 (737)
87 KOG1682 Enoyl-CoA isomerase [L 100.0 7.4E-41 1.6E-45 272.0 18.1 236 2-311 45-281 (287)
88 cd06558 crotonase-like Crotona 100.0 3E-40 6.5E-45 281.1 16.3 180 1-182 11-191 (195)
89 COG0447 MenB Dihydroxynaphthoi 100.0 6.7E-41 1.5E-45 274.7 10.3 237 2-311 32-272 (282)
90 TIGR03222 benzo_boxC benzoyl-C 100.0 3.2E-39 6.9E-44 308.8 17.8 181 1-182 23-222 (546)
91 PRK08184 benzoyl-CoA-dihydrodi 100.0 2.6E-38 5.6E-43 303.6 17.7 186 1-187 27-232 (550)
92 cd07014 S49_SppA Signal peptid 99.8 3.8E-21 8.3E-26 161.0 8.5 141 16-176 22-173 (177)
93 cd07020 Clp_protease_NfeD_1 No 99.8 5.8E-20 1.3E-24 155.0 9.8 138 12-173 9-166 (187)
94 cd07019 S49_SppA_1 Signal pept 99.7 1.6E-16 3.5E-21 136.6 7.7 87 14-120 19-105 (211)
95 cd00394 Clp_protease_like Case 99.6 3.3E-15 7.1E-20 123.2 10.3 134 13-169 8-161 (161)
96 PF13766 ECH_C: 2-enoyl-CoA Hy 99.6 2.8E-15 6.1E-20 116.4 7.6 92 214-312 5-96 (118)
97 cd07022 S49_Sppa_36K_type Sign 99.6 1.9E-14 4.1E-19 124.1 10.3 97 4-121 12-109 (214)
98 cd07016 S14_ClpP_1 Caseinolyti 99.5 1.9E-14 4.2E-19 118.5 8.2 128 16-169 15-160 (160)
99 cd07023 S49_Sppa_N_C Signal pe 99.5 7E-14 1.5E-18 120.1 8.8 139 15-173 16-201 (208)
100 TIGR00705 SppA_67K signal pept 99.5 1.2E-13 2.6E-18 135.0 9.9 149 16-187 329-523 (584)
101 TIGR00706 SppA_dom signal pept 99.4 1.5E-12 3.2E-17 111.7 9.5 135 18-175 15-198 (207)
102 cd07018 S49_SppA_67K_type Sign 99.3 4.6E-12 1E-16 109.8 9.4 142 13-175 26-216 (222)
103 cd07021 Clp_protease_NfeD_like 99.3 5.6E-12 1.2E-16 105.1 9.5 133 12-172 9-171 (178)
104 cd07015 Clp_protease_NfeD Nodu 98.9 1.1E-08 2.5E-13 84.4 9.6 137 12-172 9-165 (172)
105 cd07013 S14_ClpP Caseinolytic 98.9 1.5E-08 3.2E-13 83.4 9.7 134 13-169 9-162 (162)
106 KOG1683 Hydroxyacyl-CoA dehydr 98.8 4.2E-09 9.2E-14 94.7 3.5 163 3-172 71-240 (380)
107 PRK00277 clpP ATP-dependent Cl 98.8 4.2E-08 9.2E-13 83.5 9.1 134 13-172 40-196 (200)
108 PRK10949 protease 4; Provision 98.7 1.1E-07 2.5E-12 93.4 10.4 133 19-171 350-528 (618)
109 PRK12553 ATP-dependent Clp pro 98.6 1.7E-07 3.6E-12 80.2 9.4 136 12-172 43-202 (207)
110 cd07017 S14_ClpP_2 Caseinolyti 98.6 2.5E-07 5.5E-12 76.9 8.9 134 13-169 18-171 (171)
111 PRK14512 ATP-dependent Clp pro 98.5 6.1E-07 1.3E-11 76.0 9.6 137 13-172 32-188 (197)
112 PF00574 CLP_protease: Clp pro 98.5 2.9E-07 6.2E-12 77.3 6.8 137 13-172 25-181 (182)
113 CHL00028 clpP ATP-dependent Cl 98.4 1.7E-06 3.7E-11 73.4 9.7 136 13-173 39-197 (200)
114 PRK12319 acetyl-CoA carboxylas 98.4 3.9E-06 8.5E-11 73.7 12.1 138 10-173 76-215 (256)
115 TIGR00493 clpP ATP-dependent C 98.4 3.6E-06 7.9E-11 71.1 10.4 136 13-171 35-190 (191)
116 CHL00198 accA acetyl-CoA carbo 98.4 6.5E-06 1.4E-10 74.1 12.3 140 10-173 132-271 (322)
117 COG0616 SppA Periplasmic serin 98.3 5.5E-06 1.2E-10 75.6 11.8 85 18-123 82-166 (317)
118 PRK14514 ATP-dependent Clp pro 98.2 1.4E-05 3E-10 68.6 11.1 137 13-172 63-219 (221)
119 TIGR00513 accA acetyl-CoA carb 98.2 3E-05 6.4E-10 69.9 13.5 138 10-173 129-268 (316)
120 PRK12551 ATP-dependent Clp pro 98.2 1.5E-05 3.2E-10 67.4 11.0 139 12-173 33-191 (196)
121 PLN03229 acetyl-coenzyme A car 98.2 1.6E-05 3.4E-10 78.0 12.4 139 10-172 220-358 (762)
122 PLN03230 acetyl-coenzyme A car 98.2 3.1E-05 6.8E-10 71.6 13.3 137 11-172 200-337 (431)
123 PRK14513 ATP-dependent Clp pro 98.2 1.7E-05 3.6E-10 67.3 10.5 137 12-174 35-194 (201)
124 PRK05724 acetyl-CoA carboxylas 98.2 3E-05 6.5E-10 69.9 12.0 140 10-173 129-268 (319)
125 TIGR03133 malonate_beta malona 98.0 0.00012 2.5E-09 64.9 12.9 140 9-174 71-219 (274)
126 PRK11778 putative inner membra 98.0 4.3E-05 9.4E-10 69.4 9.9 97 79-175 148-289 (330)
127 PRK07189 malonate decarboxylas 98.0 0.00017 3.6E-09 64.7 13.4 140 9-174 80-228 (301)
128 TIGR03134 malonate_gamma malon 97.9 0.00072 1.6E-08 58.9 14.6 147 5-175 39-192 (238)
129 PF01972 SDH_sah: Serine dehyd 97.8 0.00025 5.5E-09 62.0 11.3 97 11-133 70-166 (285)
130 PRK05654 acetyl-CoA carboxylas 97.7 0.00077 1.7E-08 60.5 13.4 146 4-180 127-274 (292)
131 TIGR00705 SppA_67K signal pept 97.7 0.0002 4.3E-09 70.7 10.4 85 16-120 76-160 (584)
132 PF01343 Peptidase_S49: Peptid 97.7 1.9E-05 4E-10 64.5 2.7 94 82-175 3-143 (154)
133 TIGR00515 accD acetyl-CoA carb 97.6 0.00093 2E-08 59.7 12.0 141 9-180 132-273 (285)
134 COG1030 NfeD Membrane-bound se 97.6 0.00055 1.2E-08 63.7 10.2 138 11-172 35-188 (436)
135 COG0740 ClpP Protease subunit 97.6 0.00067 1.5E-08 57.0 9.4 97 76-174 76-194 (200)
136 CHL00174 accD acetyl-CoA carbo 97.5 0.0019 4.1E-08 57.7 12.2 141 9-180 145-287 (296)
137 PRK12552 ATP-dependent Clp pro 97.4 0.00097 2.1E-08 57.3 8.7 142 13-173 49-215 (222)
138 PRK10949 protease 4; Provision 97.3 0.0021 4.5E-08 63.8 10.6 86 16-121 95-180 (618)
139 TIGR01117 mmdA methylmalonyl-C 97.2 0.0071 1.5E-07 58.8 13.7 152 4-177 321-486 (512)
140 COG0825 AccA Acetyl-CoA carbox 96.6 0.0019 4.2E-08 56.8 3.4 93 71-172 174-266 (317)
141 PF01039 Carboxyl_trans: Carbo 96.6 0.015 3.3E-07 56.4 10.0 129 9-174 69-207 (493)
142 TIGR01117 mmdA methylmalonyl-C 96.4 0.021 4.5E-07 55.6 9.9 129 9-174 94-230 (512)
143 PLN02820 3-methylcrotonyl-CoA 96.4 0.044 9.5E-07 53.9 11.7 133 9-174 141-281 (569)
144 COG0777 AccD Acetyl-CoA carbox 95.9 0.054 1.2E-06 47.5 8.8 135 12-177 137-272 (294)
145 KOG0840 ATP-dependent Clp prot 95.3 0.072 1.6E-06 46.2 7.2 132 13-172 101-257 (275)
146 PF01039 Carboxyl_trans: Carbo 95.2 0.088 1.9E-06 51.2 8.6 154 2-177 298-469 (493)
147 PLN02820 3-methylcrotonyl-CoA 95.0 0.35 7.6E-06 47.7 11.8 144 11-176 380-544 (569)
148 COG4799 Acetyl-CoA carboxylase 94.5 0.11 2.3E-06 50.2 6.7 94 7-116 101-194 (526)
149 PLN02157 3-hydroxyisobutyryl-C 91.3 0.37 8.1E-06 45.5 5.3 59 248-310 228-289 (401)
150 COG4799 Acetyl-CoA carboxylase 87.5 8.9 0.00019 37.3 11.5 155 4-176 330-498 (526)
151 COG0074 SucD Succinyl-CoA synt 81.3 5.3 0.00011 35.6 6.4 53 21-97 188-240 (293)
152 KOG0540 3-Methylcrotonyl-CoA c 78.2 17 0.00036 34.6 8.9 148 3-177 354-512 (536)
153 PTZ00187 succinyl-CoA syntheta 72.7 12 0.00026 34.2 6.5 54 20-97 211-264 (317)
154 PF00549 Ligase_CoA: CoA-ligas 68.3 12 0.00026 30.3 5.0 62 20-98 60-121 (153)
155 TIGR00237 xseA exodeoxyribonuc 67.6 9.9 0.00022 36.4 5.1 58 15-92 169-226 (432)
156 PF13607 Succ_CoA_lig: Succiny 67.0 18 0.00039 28.7 5.7 52 20-96 41-92 (138)
157 PF02601 Exonuc_VII_L: Exonucl 66.6 12 0.00025 34.2 5.2 57 16-92 55-114 (319)
158 smart00250 PLEC Plectin repeat 64.3 5.6 0.00012 23.8 1.8 18 151-168 18-35 (38)
159 PLN02522 ATP citrate (pro-S)-l 59.2 32 0.0007 34.4 7.0 52 21-97 210-262 (608)
160 COG1570 XseA Exonuclease VII, 58.6 21 0.00046 34.0 5.4 17 76-92 216-232 (440)
161 PRK07938 enoyl-CoA hydratase; 57.8 38 0.00083 29.6 6.7 131 93-238 108-248 (249)
162 PRK05864 enoyl-CoA hydratase; 56.9 41 0.0009 29.9 6.9 134 93-241 123-272 (276)
163 PF00681 Plectin: Plectin repe 53.8 4.3 9.4E-05 25.4 0.0 20 150-169 17-36 (45)
164 PRK05980 enoyl-CoA hydratase; 52.7 51 0.0011 29.0 6.7 133 93-239 114-258 (260)
165 PLN00125 Succinyl-CoA ligase [ 50.8 40 0.00086 30.6 5.7 53 20-96 192-244 (300)
166 PRK06494 enoyl-CoA hydratase; 49.4 74 0.0016 27.9 7.2 134 93-240 108-255 (259)
167 PRK06091 membrane protein FdrA 47.2 62 0.0014 31.9 6.7 52 21-97 240-291 (555)
168 PRK00286 xseA exodeoxyribonucl 46.9 31 0.00066 33.0 4.6 17 76-92 215-231 (438)
169 TIGR01929 menB naphthoate synt 46.7 48 0.001 29.2 5.5 130 97-240 115-255 (259)
170 PLN02921 naphthoate synthase 44.8 70 0.0015 29.4 6.5 90 137-241 228-320 (327)
171 PRK12478 enoyl-CoA hydratase; 44.3 39 0.00085 30.5 4.7 90 137-240 176-277 (298)
172 PRK05617 3-hydroxyisobutyryl-C 43.8 72 0.0016 29.4 6.4 155 84-240 107-322 (342)
173 PLN02600 enoyl-CoA hydratase 43.1 46 0.00099 29.1 4.8 120 108-241 118-248 (251)
174 PRK08150 enoyl-CoA hydratase; 43.0 40 0.00086 29.6 4.4 122 108-243 122-254 (255)
175 PRK07468 enoyl-CoA hydratase; 41.9 48 0.001 29.2 4.8 89 139-241 168-259 (262)
176 PRK08258 enoyl-CoA hydratase; 40.1 51 0.0011 29.3 4.7 89 139-241 183-274 (277)
177 PRK09076 enoyl-CoA hydratase; 39.4 57 0.0012 28.7 4.9 130 98-241 114-255 (258)
178 PRK07854 enoyl-CoA hydratase; 39.1 56 0.0012 28.4 4.7 54 186-240 185-239 (243)
179 PRK06072 enoyl-CoA hydratase; 39.0 50 0.0011 28.8 4.4 65 174-241 179-245 (248)
180 PRK07112 polyketide biosynthes 38.5 52 0.0011 28.8 4.5 87 139-241 164-252 (255)
181 PRK06142 enoyl-CoA hydratase; 37.1 62 0.0013 28.7 4.8 127 100-240 130-269 (272)
182 PRK07659 enoyl-CoA hydratase; 36.6 68 0.0015 28.2 4.9 88 139-241 167-257 (260)
183 TIGR03210 badI 2-ketocyclohexa 36.3 78 0.0017 27.7 5.2 89 138-240 162-252 (256)
184 PRK06563 enoyl-CoA hydratase; 36.0 70 0.0015 28.0 4.9 120 108-241 122-252 (255)
185 TIGR03189 dienoyl_CoA_hyt cycl 35.4 78 0.0017 27.7 5.1 88 139-241 157-248 (251)
186 PRK06127 enoyl-CoA hydratase; 35.3 60 0.0013 28.7 4.4 134 94-241 121-266 (269)
187 PRK03580 carnitinyl-CoA dehydr 34.9 85 0.0019 27.6 5.3 121 107-241 123-258 (261)
188 PRK07396 dihydroxynaphthoic ac 34.7 75 0.0016 28.2 4.9 130 97-241 125-266 (273)
189 PRK07509 enoyl-CoA hydratase; 34.0 71 0.0015 28.0 4.6 61 177-240 197-259 (262)
190 PRK08321 naphthoate synthase; 33.9 79 0.0017 28.6 5.0 134 93-240 149-294 (302)
191 PRK05981 enoyl-CoA hydratase; 33.8 67 0.0014 28.3 4.4 90 138-241 171-263 (266)
192 TIGR02280 PaaB1 phenylacetate 32.9 82 0.0018 27.6 4.8 90 138-241 161-253 (256)
193 cd04241 AAK_FomA-like AAK_FomA 32.4 88 0.0019 27.2 4.9 39 4-45 11-49 (252)
194 TIGR01019 sucCoAalpha succinyl 32.2 1.2E+02 0.0026 27.3 5.7 23 20-42 185-207 (286)
195 PF03464 eRF1_2: eRF1 domain 2 32.0 93 0.002 24.2 4.5 42 2-43 28-83 (133)
196 PRK05678 succinyl-CoA syntheta 31.9 1.3E+02 0.0028 27.2 5.9 23 20-42 187-209 (291)
197 KOG0595 Serine/threonine-prote 30.5 87 0.0019 29.6 4.6 37 46-82 90-126 (429)
198 PRK08139 enoyl-CoA hydratase; 30.3 1E+02 0.0022 27.3 4.9 89 139-241 172-263 (266)
199 PRK05674 gamma-carboxygeranoyl 30.0 98 0.0021 27.3 4.8 131 97-241 119-261 (265)
200 PRK05862 enoyl-CoA hydratase; 29.8 91 0.002 27.3 4.6 88 139-240 163-253 (257)
201 PRK07327 enoyl-CoA hydratase; 29.4 1.1E+02 0.0024 26.9 5.1 131 97-241 124-265 (268)
202 PRK07799 enoyl-CoA hydratase; 28.7 1.1E+02 0.0025 26.8 5.0 130 97-240 118-259 (263)
203 KOG4391 Predicted alpha/beta h 28.6 25 0.00055 30.4 0.7 87 84-175 146-240 (300)
204 smart00463 SMR Small MutS-rela 28.3 1.3E+02 0.0027 20.9 4.3 31 15-45 12-43 (80)
205 PLN02664 enoyl-CoA hydratase/d 28.0 1E+02 0.0022 27.4 4.6 118 108-240 141-271 (275)
206 PRK05995 enoyl-CoA hydratase; 27.9 1.1E+02 0.0023 26.9 4.7 89 139-241 167-259 (262)
207 PRK05809 3-hydroxybutyryl-CoA 27.6 94 0.002 27.2 4.3 120 108-241 127-257 (260)
208 TIGR02717 AcCoA-syn-alpha acet 27.6 1.8E+02 0.0039 27.9 6.5 54 19-97 189-242 (447)
209 PLN02888 enoyl-CoA hydratase 27.4 1.1E+02 0.0024 27.0 4.7 135 95-243 115-263 (265)
210 PRK13505 formate--tetrahydrofo 27.4 1.3E+02 0.0027 29.8 5.3 70 31-104 322-391 (557)
211 smart00870 Asparaginase Aspara 27.3 2.5E+02 0.0054 25.7 7.1 30 12-41 56-85 (323)
212 PRK09245 enoyl-CoA hydratase; 27.1 1E+02 0.0023 27.0 4.5 133 94-240 118-262 (266)
213 PRK14053 methyltransferase; Pr 27.1 90 0.002 26.0 3.6 37 21-57 52-89 (194)
214 PRK08252 enoyl-CoA hydratase; 27.0 1.2E+02 0.0026 26.5 4.9 119 108-240 121-250 (254)
215 PRK07657 enoyl-CoA hydratase; 27.0 1.1E+02 0.0023 27.0 4.5 88 139-240 166-256 (260)
216 PRK11423 methylmalonyl-CoA dec 26.7 1.4E+02 0.0031 26.2 5.2 119 108-240 126-257 (261)
217 PF09905 DUF2132: Uncharacteri 26.4 96 0.0021 21.0 3.0 29 219-253 33-62 (64)
218 PRK08140 enoyl-CoA hydratase; 26.3 1.3E+02 0.0029 26.3 5.0 90 137-240 166-258 (262)
219 PRK07658 enoyl-CoA hydratase; 26.2 1E+02 0.0022 26.9 4.3 89 139-241 163-254 (257)
220 PRK06495 enoyl-CoA hydratase; 25.4 1.2E+02 0.0025 26.7 4.4 89 139-241 163-254 (257)
221 PF06833 MdcE: Malonate decarb 25.4 4.6E+02 0.0099 22.9 8.7 97 70-174 90-189 (234)
222 PLN02874 3-hydroxyisobutyryl-C 25.2 1.5E+02 0.0033 27.8 5.4 78 83-162 111-197 (379)
223 KOG1255 Succinyl-CoA synthetas 25.1 2E+02 0.0044 25.2 5.5 56 20-96 218-273 (329)
224 PRK09674 enoyl-CoA hydratase-i 24.8 1.2E+02 0.0027 26.4 4.5 133 94-240 107-251 (255)
225 PRK06210 enoyl-CoA hydratase; 24.4 1.4E+02 0.003 26.3 4.8 88 139-240 177-268 (272)
226 PRK00964 tetrahydromethanopter 24.1 1E+02 0.0023 26.5 3.6 36 21-56 59-95 (225)
227 PF12268 DUF3612: Protein of u 23.8 89 0.0019 25.1 2.9 24 33-56 79-102 (178)
228 PF04208 MtrA: Tetrahydrometha 23.8 95 0.0021 25.6 3.2 35 21-55 55-90 (176)
229 TIGR01111 mtrA N5-methyltetrah 23.7 1.1E+02 0.0024 26.4 3.6 36 21-56 59-95 (238)
230 PF06258 Mito_fiss_Elm1: Mitoc 23.4 5.2E+02 0.011 23.5 8.4 110 9-123 121-245 (311)
231 PRK06144 enoyl-CoA hydratase; 23.4 1.4E+02 0.0031 26.2 4.7 86 139-241 172-259 (262)
232 PRK14558 pyrH uridylate kinase 22.9 3.6E+02 0.0077 23.1 7.0 34 11-45 18-51 (231)
233 COG0528 PyrH Uridylate kinase 22.5 1.5E+02 0.0033 25.8 4.4 36 10-46 22-57 (238)
234 COG0252 AnsB L-asparaginase/ar 22.4 3.9E+02 0.0084 24.9 7.3 31 11-41 78-108 (351)
235 PF01713 Smr: Smr domain; Int 21.7 1.5E+02 0.0033 20.7 3.7 35 15-49 9-43 (83)
236 KOG3179 Predicted glutamine sy 21.6 1.9E+02 0.0041 24.8 4.6 43 34-95 60-103 (245)
237 TIGR02153 gatD_arch glutamyl-t 21.3 3.5E+02 0.0076 25.7 7.0 32 11-42 118-149 (404)
238 COG4637 Predicted ATPase [Gene 21.1 1.9E+02 0.004 26.7 4.8 38 1-42 293-330 (373)
239 cd03300 ABC_PotA_N PotA is an 20.9 2E+02 0.0042 24.6 4.9 38 1-40 151-188 (232)
240 PF14532 Sigma54_activ_2: Sigm 20.6 2E+02 0.0044 22.2 4.6 44 1-56 72-115 (138)
241 PRK08260 enoyl-CoA hydratase; 20.6 2.1E+02 0.0046 25.7 5.2 90 139-242 182-276 (296)
242 cd03216 ABC_Carb_Monos_I This 20.5 2.4E+02 0.0052 22.6 5.1 36 2-41 104-139 (163)
No 1
>PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=100.00 E-value=4.9e-64 Score=464.22 Aligned_cols=312 Identities=69% Similarity=1.145 Sum_probs=272.8
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||+++|+||.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++..............++...+.+...
T Consensus 49 ~ItLNRP~~lNALs~~m~~~L~~al~~~~~D~~vrvVVl~G~GkaFcAGgDl~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 128 (401)
T PLN02157 49 TAILNRPPALNALTTHMGYRLQKLYKNWEEDPNIGFVMMKGSGRAFCAGGDIVSLYHLRKRGSPDAIREFFSSLYSFIYL 128 (401)
T ss_pred EEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCCCCccCCcCHHHHHhhccccchHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999886432112222234455556667788
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEM 160 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~eA 160 (312)
|.++|||+||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+.+|++||+.++|+||
T Consensus 129 i~~~pkPvIA~v~G~a~GGG~~Lal~cD~rvate~a~fa~PE~~iGl~Pd~G~s~~L~rl~G~~a~~L~LTG~~i~A~eA 208 (401)
T PLN02157 129 LGTYLKPHVAILNGVTMGGGTGVSIPGTFRVATDRTIFATPETIIGFHPDAGASFNLSHLPGRLGEYLGLTGLKLSGAEM 208 (401)
T ss_pred HHhCCCCEEEEEeCeEeehhHHHHHhCCEEEEeCCCEEEChhhhcCCCCCccHHHHHHHhhhHHHHHHHHcCCcCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999779999999999999999
Q ss_pred HHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccCC
Q 021410 161 MACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASL 240 (312)
Q Consensus 161 ~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 240 (312)
+++||||++||++++....+.++++...+|.++...|+.+.....+...........+..||+.+++++++++|+....+
T Consensus 209 ~~~GLv~~vVp~~~l~~~~~~~~~i~~~~p~av~~~k~~~~~~~~~~~~~l~~~~~~i~~~f~~~d~~ei~~al~~~~~k 288 (401)
T PLN02157 209 LACGLATHYIRSEEIPVMEEQLKKLLTDDPSVVESCLEKCAEVAHPEKTGVIRRIDLLEKCFSHDTVEEIIDSLEIEAGR 288 (401)
T ss_pred HHcCCceEEeCHhHHHHHHHHHHHHHcCCHHHHHHHHHHHhcccCCcchhHHHHHHHHHHHhcCCCHHHHHHHHHhhhcc
Confidence 99999999999999876666567888889999999999886553222334445578899999999999999999764344
Q ss_pred CCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCCC
Q 021410 241 INDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKHV 312 (312)
Q Consensus 241 ~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~~ 312 (312)
..++|++++++.|.+.||.|+++|.++++++...++++++++|+++..+++....++||.|||+|.|+|||.
T Consensus 289 r~~~wa~~~~~~l~~~sP~Sl~vt~~~~~~~~~~~l~e~~~~e~~~~~~~~~~~~~~DF~EGVRA~LiDKd~ 360 (401)
T PLN02157 289 RKDTWCITTLRRLKESSPLSLKVALRSIREGRLQTLDQCLIREYRMSLQGLIGPMSGNFCEGVRARLIDKDE 360 (401)
T ss_pred cchHHHHHHHHHHHhcCcHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHcCCCC
Confidence 467999999999999999999999999999999999999999999999887411259999999999999873
No 2
>PLN02988 3-hydroxyisobutyryl-CoA hydrolase
Probab=100.00 E-value=2.1e-63 Score=458.68 Aligned_cols=312 Identities=47% Similarity=0.813 Sum_probs=272.4
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||++.|+||.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++......+.......++...+.+...
T Consensus 21 ~ItLnRP~~lNALs~~m~~~L~~al~~~~~d~~v~~VVl~G~G~~FcAGgDl~~l~~~~~~~~~~~~~~~f~~~~~l~~~ 100 (381)
T PLN02988 21 ILTLNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILKGHGRAFCAGGDVAAVVRDIEQGNWRLGANFFSDEYMLNYV 100 (381)
T ss_pred EEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCeeEEEEECCCCCcccCcCHHHHHhhhcccchhHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999875322122112233445555566778
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEM 160 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~eA 160 (312)
+.++|||+||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+.+|+|||++++|+||
T Consensus 101 i~~~pKPvIa~v~G~a~GGG~~Lal~~D~rvate~a~f~mPE~~iGl~Pd~G~s~~L~rl~G~~~~~l~LTG~~i~a~eA 180 (381)
T PLN02988 101 MATYSKAQVSILNGIVMGGGAGVSVHGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEM 180 (381)
T ss_pred HHHCCCCEEEEecCeEeehhhHHhhcCCeEEEcCCcEEeChhhhcCcCCCccHHHHHHHHHHHHHHHHHHcCCCCCHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999889999999999999999
Q ss_pred HHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccCC
Q 021410 161 MACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASL 240 (312)
Q Consensus 161 ~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 240 (312)
+++||||++||++++.+....++++...+|..+...++.+.................|++||+.+++++|++.|+....+
T Consensus 181 ~~~GLv~~vv~~~~l~~~~~~la~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~f~~~~~~~i~~~L~~~~~~ 260 (381)
T PLN02988 181 LACGLATHFVPSTRLTALEADLCRIGSNDPTFASTILDAYTQHPRLKPQSAYHRLDVIDRCFSRRTVEEIISALEREATQ 260 (381)
T ss_pred HHcCCceEecCHhHHHHHHHHHHHhhccCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHHhCCCCHHHHHHHHHhhccc
Confidence 99999999999999998888888888888889999998886543212234445588999999999999999999975322
Q ss_pred CCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCCC
Q 021410 241 INDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKHV 312 (312)
Q Consensus 241 ~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~~ 312 (312)
...+|++++++.|.+.||.|+++|++.++++...++.++++.|+++..+++....++||.|||||.|+||+.
T Consensus 261 ~~~~wa~~~~~~l~~~sP~sl~vt~~~~~~~~~~sl~e~~~~e~~~~~~~~~~~~~~DF~EGVRA~LiDKd~ 332 (381)
T PLN02988 261 EADGWISATIQALKKASPASLKISLRSIREGRLQGVGQCLIREYRMVCHVMKGEISKDFVEGCRAILVDKDK 332 (381)
T ss_pred cccHHHHHHHHHHHhcCcHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHhcCCCC
Confidence 356899999999999999999999999999999999999999999999987511249999999999999973
No 3
>PLN02851 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=100.00 E-value=2.4e-63 Score=459.23 Aligned_cols=312 Identities=66% Similarity=1.141 Sum_probs=275.6
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||+++|+||.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++.......+.+....++...+.+.+.
T Consensus 54 ~ItLNRP~~lNALs~~m~~eL~~al~~~~~D~~vrvVVL~G~GkaFcAGgDl~~l~~~~~~~~~~~~~~~f~~~~~l~~~ 133 (407)
T PLN02851 54 AAILNRPSSLNALTIPMVARLKRLYESWEENPDIGFVLMKGSGRAFCSGADVVSLYHLINEGNVEECKLFFENLYKFVYL 133 (407)
T ss_pred EEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcCHHHHHhhccccchHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999986533222234456677778888889
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEM 160 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~eA 160 (312)
+.++|||+||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+.+|++||++++|+||
T Consensus 134 i~~~pKPvIA~v~G~amGGG~gLal~~D~rVate~a~famPE~~iGl~PdvG~s~~L~rl~g~~g~~L~LTG~~i~a~eA 213 (407)
T PLN02851 134 QGTYLKPNVAIMDGITMGCGAGISIPGMFRVVTDKTVFAHPEVQMGFHPDAGASYYLSRLPGYLGEYLALTGQKLNGVEM 213 (407)
T ss_pred HHhCCCCEEEEEcCEEeeHHHHHHHhCCEEEEeCCceEecchhccCCCCCccHHHHHHHhcCHHHHHHHHhCCcCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999889999999999999999
Q ss_pred HHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccCC
Q 021410 161 MACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASL 240 (312)
Q Consensus 161 ~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 240 (312)
+++||+|+++|++++..+.+.+.++...++..+....+.+.....+...........|++||+.+++++|++.|+.....
T Consensus 214 ~~~GLa~~~v~~~~l~~l~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~I~~~F~~~sv~~I~~~L~~~~~~ 293 (407)
T PLN02851 214 IACGLATHYCLNARLPLIEERLGKLLTDDPAVIEDSLAQYGDLVYPDKSSVLHKIETIDKCFGHDTVEEIIEALENEAAS 293 (407)
T ss_pred HHCCCceeecCHhhHHHHHHHHHhhccCCHHHHHHHHHHhccccCCCcccHHHHHHHHHHHhCCCCHHHHHHHHHhcccc
Confidence 99999999999999977777777777777888888888776442223334555578999999999999999999975433
Q ss_pred CCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCCC
Q 021410 241 INDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKHV 312 (312)
Q Consensus 241 ~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~~ 312 (312)
...+|++++++.|.+.||.|+++|+++++++...+++++++.|+++..+++....++||.|||||.|+|||.
T Consensus 294 ~~~~wa~~~~~~l~~~SP~Sl~vt~~~~~~~~~~sl~e~l~~E~~l~~~~~~~~~~~DF~EGVRA~LIDKd~ 365 (407)
T PLN02851 294 SYDEWCKKALKKIKEASPLSLKVTLQSIREGRFQTLDQCLAREYRISLCGVSKWVSGDFCEGVRARLVDKDF 365 (407)
T ss_pred cchHHHHHHHHHHHhcCcHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCccchHHHHHHHHhcCCCC
Confidence 346899999999999999999999999999999999999999999998886211279999999999999973
No 4
>PLN02874 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=100.00 E-value=2.6e-60 Score=440.01 Aligned_cols=308 Identities=44% Similarity=0.774 Sum_probs=264.7
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||+++|++|.+|+.+|.++++.++.|++||+|||+|.|++||+|+|++++...... ......+....+.+...
T Consensus 23 ~ItLnrP~~~Nal~~~m~~eL~~al~~~~~d~~vrvvVl~g~g~~FcaG~Dl~~~~~~~~~--~~~~~~~~~~~~~l~~~ 100 (379)
T PLN02874 23 VITLNRPRQLNVISLSVVSLLAEFLEQWEKDDSVELIIIKGAGRAFSAGGDLKMFYDGRES--DDSCLEVVYRMYWLCYH 100 (379)
T ss_pred EEEECCCccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCccCHHHHHhhccc--chHHHHHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999987542111 11222333444556778
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEM 160 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~eA 160 (312)
+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+.+|++||++++|+||
T Consensus 101 i~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~iGl~p~~g~~~~L~rl~g~~a~~l~ltG~~i~a~eA 180 (379)
T PLN02874 101 IHTYKKTQVALVHGLVMGGGAGLMVPMKFRVVTEKTVFATPEASVGFHTDCGFSYILSRLPGHLGEYLALTGARLNGKEM 180 (379)
T ss_pred HHhCCCCEEEEecCeEEecHHHHHHhCCeEEEeCCeEEeccccccCcCCChhHHHHHHhhhHHHHHHHHHcCCcccHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999669999999999999999
Q ss_pred HHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccCC
Q 021410 161 MACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASL 240 (312)
Q Consensus 161 ~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 240 (312)
+++||||++||++++.+.+..+.++...+...+..+++.+.................|..||+.+++.++++.+++..++
T Consensus 181 ~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~eii~al~~~~~~ 260 (379)
T PLN02874 181 VACGLATHFVPSEKLPELEKRLLNLNSGDESAVQEAIEEFSKDVQADEDSILNKQSWINECFSKDTVEEIIKAFESEASK 260 (379)
T ss_pred HHcCCccEEeCHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhcccCCCcchhHHHHHHHHHHhCCCCHHHHHHHHhhcccc
Confidence 99999999999988877666666666666777777777665433333445556688899999999999999999987666
Q ss_pred CCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccC
Q 021410 241 INDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNK 310 (312)
Q Consensus 241 ~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r 310 (312)
...+||.+++++|+++||.|++.+|++++.+...+++++++.|++.....+....++||+||++||+++|
T Consensus 261 ~~~~~A~~~a~~l~~~sP~al~~tk~~~~~~~~~~l~~~l~~e~~~~~~~~~~~~~~D~~EGv~AflidK 330 (379)
T PLN02874 261 TGNEWIKETLKGLRRSSPTGLKITLRSIREGRKQSLAECLKKEFRLTMNILRSTVSDDVYEGIRALVIDK 330 (379)
T ss_pred cccHHHHHHHHHHHhcChHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHhcCcCcchhhccceEEEcC
Confidence 6789999999999999999999999999998888999999999888766653223799999999998443
No 5
>KOG1684 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=100.00 E-value=1.3e-58 Score=405.42 Aligned_cols=309 Identities=50% Similarity=0.811 Sum_probs=286.6
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY 79 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (312)
+||||||+..||||.+|...+.-.+..++.++.+++||+.|.| ++||+|+|++.......++..+....++...|.+..
T Consensus 50 ~itLNRPKaLNAlnleMv~~~~~~L~~we~s~~~k~vIlkgs~~raFCAGgDI~~~ae~~~d~~~~~~~~fF~~eYsl~~ 129 (401)
T KOG1684|consen 50 VITLNRPKALNALNLEMVLSIYPKLVEWEKSPLVKLVILKGSGGRAFCAGGDIKAVAESIKDKETPEVKKFFTEEYSLNH 129 (401)
T ss_pred EEEecCchhhccccHHHHHHHHHHHHhhccCCCceEEEEecCCCceeecCccHHHHHHHhhcCCchHHHHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999995 999999999987776666777788999999999999
Q ss_pred HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHH
Q 021410 80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAE 159 (312)
Q Consensus 80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~e 159 (312)
.+.++.||.||.+||..||||++|+.+.-||||||++.|.+||+.+|++|+.|++++++|+.|..+.|+.|||.++++.|
T Consensus 130 ~igtY~KP~ValmdGITMGgG~GLS~hg~fRVATerT~~AmPEt~IGlfPDVG~Sy~lsrlpg~lg~YLgLTG~rl~GaD 209 (401)
T KOG1684|consen 130 LIGTYLKPYVALMDGITMGGGVGLSVHGRFRVATERTVFAMPETGIGLFPDVGASYFLSRLPGYLGLYLGLTGQRLSGAD 209 (401)
T ss_pred HHHHhcCceEEEeeceeecCCcceeecceeEEeeccceecccccccccccCccceeehhhCccHHHHhhhhccceecchH
Confidence 99999999999999999999999999999999999999999999999999999999999999977999999999999999
Q ss_pred HHHcCccceecCCCChhHHHHHHhhhhcCCH-HHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410 160 MMACGLATHYSVSEKLPLIEEELGKLVTDDP-SVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA 238 (312)
Q Consensus 160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 238 (312)
|+..||.+++||.+++..+.+++......+| +.+...++.|.....+.........+.|+.||+.+++++|++.|++..
T Consensus 210 ~~~~GlATHyv~S~~l~~Lee~L~~~l~~dp~~~I~~~l~~y~~~~~~~~~~~~~~~~~i~~~Fs~~tVeeIie~lk~~q 289 (401)
T KOG1684|consen 210 ALRCGLATHYVPSEKLPSLEERLLKNLNDDPQSVINETLEKYASPAKDESFSLSLKLDVINKCFSANTVEEIIEALKNYQ 289 (401)
T ss_pred HHHhcchhhccchhhhhHHHHHHhhhcCCCcHHHHHHHHHHhcccCCCccccchhhHHHHHHhhccccHHHHHHHHHHHh
Confidence 9999999999999999999999864444444 789999999988877666667778899999999999999999885543
Q ss_pred -CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCCC
Q 021410 239 -SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKHV 312 (312)
Q Consensus 239 -~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~~ 312 (312)
+....+||.+++++|.+.||.|++.|.+.++++...++++++.+|+++..+... +.||.||+||.|+|||.
T Consensus 290 ~~~~~~ewak~tlk~L~k~SPtSLkvT~r~i~egs~~tl~~~l~~Eyr~s~~~~~---~~DF~EGvRA~LIDKd~ 361 (401)
T KOG1684|consen 290 QSADGSEWAKETLKTLKKMSPTSLKVTLRQIREGSKQTLDQCLTMEYRLSLRMLM---RGDFCEGVRAVLIDKDQ 361 (401)
T ss_pred hhhhHHHHHHHHHHHHhhcCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhh---ccchhhhhhheeecCCc
Confidence 556789999999999999999999999999999999999999999999998876 99999999999999973
No 6
>PRK05617 3-hydroxyisobutyryl-CoA hydrolase; Provisional
Probab=100.00 E-value=3.5e-58 Score=421.03 Aligned_cols=300 Identities=39% Similarity=0.673 Sum_probs=256.3
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY 79 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (312)
+||||||+++|++|.+|+.+|.++++.++.||++|+|||||.| ++||+|+|++++.......+......++...+.++.
T Consensus 15 ~itLnrP~~~Nal~~~m~~~L~~~l~~~~~d~~vrvvVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (342)
T PRK05617 15 VITLNRPKALNALSLEMIRAIDAALDAWEDDDAVAAVVIEGAGERGFCAGGDIRALYEAARAGDPLAADRFFREEYRLNA 94 (342)
T ss_pred EEEECCCccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEEcCCCCceeCCcCHHHHHhhhccCCchhHHHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999 999999999987543211111111134444556778
Q ss_pred HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHH
Q 021410 80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAE 159 (312)
Q Consensus 80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~e 159 (312)
.+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+++|++||+.++|+|
T Consensus 95 ~i~~~~kPvIAaVnG~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~P~~g~~~~L~r~~g~~a~~llltG~~i~A~e 174 (342)
T PRK05617 95 LIARYPKPYIALMDGIVMGGGVGISAHGSHRIVTERTKMAMPETGIGFFPDVGGTYFLSRAPGALGTYLALTGARISAAD 174 (342)
T ss_pred HHHhCCCCEEEEEcCEEEccHhHHhhhCCEEEEcCCCEeeCCccccCcCCCccceeEehhcccHHHHHHHHcCCCCCHHH
Confidence 89999999999999999999999999999999999999999999999999999999999998845999999999999999
Q ss_pred HHHcCccceecCCCChhHHHHHHhhh-hcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410 160 MMACGLATHYSVSEKLPLIEEELGKL-VTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA 238 (312)
Q Consensus 160 A~~~Glv~~vv~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 238 (312)
|+++||||+++|++++....+.+.++ ...+.+.+..++..+.... +. ..+......|++||+..++++++++|++.
T Consensus 175 A~~~GLv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~i~~~~~~~~~~~~~~~l~~~- 251 (342)
T PRK05617 175 ALYAGLADHFVPSADLPALLDALISLRWDSGADVVDAALAAFATPA-PA-SELAAQRAWIDECFAGDTVEDIIAALEAD- 251 (342)
T ss_pred HHHcCCcceecCHHHHHHHHHHHHhcCCccchhHHHHHHHHhccCC-Cc-chhHHHHHHHHHHhCCCCHHHHHHHHHhc-
Confidence 99999999999998887654544322 2334445556665544332 22 25566778999999999999999999987
Q ss_pred CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheee-cc
Q 021410 239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQI-LN 309 (312)
Q Consensus 239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l-~~ 309 (312)
.++|+.+++++|+++||.+++.+|+++++....+++++++.|...+..++. ++|++||+++|+ ++
T Consensus 252 ---~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~d~~egv~afl~ek 317 (342)
T PRK05617 252 ---GGEFAAKTADTLRSRSPTSLKVTLEQLRRARGLTLEECLRRELRLALAMLR---SPDFVEGVRAVLIDK 317 (342)
T ss_pred ---cHHHHHHHHHHHHhCCcHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHh---CCchhhccceEEEcC
Confidence 458999999999999999999999999998888999999999999999988 999999999998 44
No 7
>PRK05980 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=8.8e-56 Score=392.70 Aligned_cols=241 Identities=28% Similarity=0.370 Sum_probs=216.6
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY 79 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (312)
+||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++..............+....+.++.
T Consensus 15 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (260)
T PRK05980 15 LLTLNRPEKLNALNYALIDRLLARLDAIEVDESVRAVILTGAGDRAFSAGADIHEFSASVAAGADVALRDFVRRGQAMTA 94 (260)
T ss_pred EEEECCcccccCCCHHHHHHHHHHHHHHhhCCCcEEEEEEeCCCCceEcCcCHHHHhhhccccchhhHHHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999 799999999987542211112223445555567788
Q ss_pred HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410 80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA 158 (312)
Q Consensus 80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~ 158 (312)
.+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++++++|++++|+
T Consensus 95 ~l~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~ 174 (260)
T PRK05980 95 RLEAFPKPVIAAVNGLAFGGGCEITEAVHLAIASERALFAKPEIRLGMPPTFGGTQRLPRLAGRKRALELLLTGDAFSAE 174 (260)
T ss_pred HHHhCCCCEEEEEcCEEEhhhhHHhHhCCEEEecCCCEecCcccccCCCCCchHhhHHHhhcCHHHHHHHHHcCCccCHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410 159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA 238 (312)
Q Consensus 159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 238 (312)
||+++||||+|+|++++.+.+.+
T Consensus 175 eA~~~Glv~~vv~~~~l~~~a~~--------------------------------------------------------- 197 (260)
T PRK05980 175 RALEIGLVNAVVPHEELLPAARA--------------------------------------------------------- 197 (260)
T ss_pred HHHHcCCCCcccCHHHHHHHHHH---------------------------------------------------------
Confidence 99999999999998877644433
Q ss_pred CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
.++++++.||.+++.+|++++.....++.++++.|...+..++. ++|++||+.+|+++|+
T Consensus 198 ----------~a~~la~~~p~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~e~~~af~~kr~ 257 (260)
T PRK05980 198 ----------LARRIIRHSPVAVAAILTAVTRGLNLSIAEGLLIESEQFARMAG---SADLREGLAAWIERRR 257 (260)
T ss_pred ----------HHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---ChhHHHHHHHHhccCC
Confidence 37889999999999999999988888999999999999999888 9999999999999986
No 8
>PLN02600 enoyl-CoA hydratase
Probab=100.00 E-value=2e-55 Score=388.08 Aligned_cols=237 Identities=24% Similarity=0.330 Sum_probs=215.5
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeC-CCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGS-GRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY 79 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (312)
+||||||+++|++|.+|+.+|.+++++++.|+++|+|||||. |++||+|+|++++... .......+...+..++.
T Consensus 7 ~itlnrp~~~Nal~~~~~~~l~~~~~~~~~d~~vr~vVl~g~~g~~F~aG~Dl~~~~~~----~~~~~~~~~~~~~~~~~ 82 (251)
T PLN02600 7 ELRLDRPEAKNAIGKEMLRGLRSAFEKIQADASARVVMLRSSVPGVFCAGADLKERRKM----SPSEVQKFVNSLRSTFS 82 (251)
T ss_pred EEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEecCCCCceeeCcCHHHHhcc----ChHHHHHHHHHHHHHHH
Confidence 589999999999999999999999999999999999999998 4899999999987532 12223345555667788
Q ss_pred HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410 80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA 158 (312)
Q Consensus 80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~ 158 (312)
.+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +++|++||+.++|+
T Consensus 83 ~l~~~~kPvIAav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l~ltg~~~~a~ 162 (251)
T PLN02600 83 SLEALSIPTIAVVEGAALGGGLELALSCDLRICGEEAVFGLPETGLAIIPGAGGTQRLPRLVGRSRAKELIFTGRRIGAR 162 (251)
T ss_pred HHHhCCCCEEEEecCeecchhHHHHHhCCEEEeeCCCEEeCcccccCcCCCchHHHHHHHHhCHHHHHHHHHhCCccCHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410 159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA 238 (312)
Q Consensus 159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 238 (312)
||+++||||+++|++++.+.+.
T Consensus 163 eA~~~Glv~~vv~~~~~~~~a~---------------------------------------------------------- 184 (251)
T PLN02600 163 EAASMGLVNYCVPAGEAYEKAL---------------------------------------------------------- 184 (251)
T ss_pred HHHHcCCCcEeeChhHHHHHHH----------------------------------------------------------
Confidence 9999999999999887764333
Q ss_pred CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
+.+++|++.||.+++.+|++++.....++++.++.|.+.+..++. ++|++||+++|+++|+
T Consensus 185 ---------~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~eg~~af~ekr~ 245 (251)
T PLN02600 185 ---------ELAQEINQKGPLAIKMAKKAINEGSEVDMASGLEIEEECYEQVLK---TKDRLEGLAAFAEKRK 245 (251)
T ss_pred ---------HHHHHHHhCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHhcCCC
Confidence 348999999999999999999988888999999999999999988 9999999999999985
No 9
>PRK06143 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.9e-55 Score=387.07 Aligned_cols=236 Identities=22% Similarity=0.312 Sum_probs=214.1
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY 79 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (312)
+||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++... +......+...++.++.
T Consensus 19 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~----~~~~~~~~~~~~~~~~~ 94 (256)
T PRK06143 19 TLTIRNAGSLNILGTPVILALTQALRWLAADPDVRVLVLRGAGEKAFIGGADIKEMATL----DQASAEAFISRLRDLCD 94 (256)
T ss_pred EEEEcCCcccCCCCHHHHHHHHHHHHHHhcCCCcEEEEEEeCCCCcccCCcCHHHHhhc----ChhhHHHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999 799999999987532 12223345556677888
Q ss_pred HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410 80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA 158 (312)
Q Consensus 80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~ 158 (312)
.+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|+ |++|++++|++++|.. +.+++++|+.++|+
T Consensus 95 ~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~-p~~~~~~~l~~~iG~~~a~~l~l~g~~~~a~ 173 (256)
T PRK06143 95 AVRHFPVPVIARIPGWCLGGGLELAAACDLRIAAHDAQFGMPEVRVGI-PSVIHAALLPRLIGWARTRWLLLTGETIDAA 173 (256)
T ss_pred HHHhCCCCEEEEECCEEeehhHHHHHhCCEEEecCCCEEeCCccccCC-CCccHHHHHHHhcCHHHHHHHHHcCCcCCHH
Confidence 899999999999999999999999999999999999999999999998 8888899999999999 99999999999999
Q ss_pred HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410 159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA 238 (312)
Q Consensus 159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 238 (312)
||+++||||+|+|++++.+.+.+
T Consensus 174 eA~~~Glv~~vv~~~~l~~~a~~--------------------------------------------------------- 196 (256)
T PRK06143 174 QALAWGLVDRVVPLAELDAAVER--------------------------------------------------------- 196 (256)
T ss_pred HHHHCCCcCeecCHHHHHHHHHH---------------------------------------------------------
Confidence 99999999999998877654443
Q ss_pred CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
.+++++..||.+++.+|++++.....++++.++.|...+..++. ++|++||+++|++||+
T Consensus 197 ----------~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~d~~e~~~af~ekr~ 256 (256)
T PRK06143 197 ----------LAASLAGCGPQALRQQKRLLREWEDMPLDVAIDDSVAEFGAAFL---TGEPQRHMAAFLNRKR 256 (256)
T ss_pred ----------HHHHHHcCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhc---ChHHHHHHHHHHhhcC
Confidence 38999999999999999999988888999999999999988887 9999999999999874
No 10
>PRK09120 p-hydroxycinnamoyl CoA hydratase/lyase; Validated
Probab=100.00 E-value=3.7e-55 Score=390.87 Aligned_cols=241 Identities=22% Similarity=0.299 Sum_probs=210.8
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++..............+....+.++..
T Consensus 20 ~itlnrp~~~Nal~~~m~~el~~al~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (275)
T PRK09120 20 WVTLNRPEKRNAMSPTLNREMIDVLDALEFDDDAGVLVLTGAGDAWSAGMDLKEYFRETDAQPEILQERIRREAYGWWRR 99 (275)
T ss_pred EEEecCcccccCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCceecCcCHHHHhhccccchhHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999875321111111122233345567788
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE 159 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e 159 (312)
+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +.+|++||+.++|+|
T Consensus 100 l~~~~kPvIAav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~llltg~~~~A~e 179 (275)
T PRK09120 100 LRWYQKPTIAMVNGWCFGGGFSPLVACDLAIAADEAQFGLSEINWGIPPGGGVSKAMADTVGHRDALYYIMTGETFTGRK 179 (275)
T ss_pred HHhCCCCEEEEEcCEEechhHHHHHhCCEEEEeCCcEecCCccccCCCCCcchHHHHHHHcCHHHHHHHHhcCCccCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410 160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS 239 (312)
Q Consensus 160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 239 (312)
|+++||||+|||++++++.+.+
T Consensus 180 A~~~Glv~~vv~~~~l~~~a~~---------------------------------------------------------- 201 (275)
T PRK09120 180 AAEMGLVNESVPLAQLRARTRE---------------------------------------------------------- 201 (275)
T ss_pred HHHcCCcceecCHHHHHHHHHH----------------------------------------------------------
Confidence 9999999999998888754443
Q ss_pred CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHH--HHHhhhcCCCC-ChhhhhheeeccCC
Q 021410 240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRM--SLQGVSRLISG-DFYEVSNFQILNKH 311 (312)
Q Consensus 240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~--~~~~~~~~~~~-d~~eg~~a~l~~r~ 311 (312)
.+++|+..||.+++.+|++++.....++.+.++.|... ...++. ++ |++||+++|+++|.
T Consensus 202 ---------~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~---~~~d~~eg~~afl~kr~ 264 (275)
T PRK09120 202 ---------LAAKLLEKNPVVLRAAKDGFKRVRELTWDQAEDYLYAKLEQANSLD---PEGGREEGLKQFLDDKS 264 (275)
T ss_pred ---------HHHHHHhCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhC---CHHHHHHHHHHHHhccc
Confidence 38999999999999999999998888999999888654 334455 77 89999999999885
No 11
>PLN02664 enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase
Probab=100.00 E-value=4.8e-55 Score=390.55 Aligned_cols=241 Identities=24% Similarity=0.323 Sum_probs=213.7
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhcc---CC----hHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQ---GK----LEECKDFFRT 73 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~---~~----~~~~~~~~~~ 73 (312)
+||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++...... .+ ......+...
T Consensus 20 ~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vrvvVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (275)
T PLN02664 20 HLNLNRPSQRNALSLDFFTEFPKALSSLDQNPNVSVIILSGAGDHFCSGIDLKTLNSISEQSSSGDRGRSGERLRRKIKF 99 (275)
T ss_pred EEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCceeeCcChHHhhhcccccccccchhhHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999987542110 01 1122233444
Q ss_pred HHHHHHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcC
Q 021410 74 LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTG 152 (312)
Q Consensus 74 ~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg 152 (312)
+++++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++++++||
T Consensus 100 ~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~A~~l~ltg 179 (275)
T PLN02664 100 LQDAITAIEQCRKPVIAAIHGACIGGGVDIVTACDIRYCSEDAFFSVKEVDLAITADLGTLQRLPSIVGYGNAMELALTG 179 (275)
T ss_pred HHHHHHHHHhCCCCEEEEECCccccchHHHHHhCCEEEecCCCEeccHHHhhCCCCCccHHHHHHHHhCHHHHHHHHHhC
Confidence 56677889999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred CCCCHHHHHHcCccceecCC-CChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHH
Q 021410 153 AKLNGAEMMACGLATHYSVS-EKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEII 231 (312)
Q Consensus 153 ~~i~a~eA~~~Glv~~vv~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (312)
+.++|+||+++||||++||+ +++.+.+.
T Consensus 180 ~~~~a~eA~~~GLv~~vv~~~~~l~~~~~--------------------------------------------------- 208 (275)
T PLN02664 180 RRFSGSEAKELGLVSRVFGSKEDLDEGVR--------------------------------------------------- 208 (275)
T ss_pred CCCCHHHHHHcCCCceeeCChhHHHHHHH---------------------------------------------------
Confidence 99999999999999999985 66654333
Q ss_pred HHHHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 232 DSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 232 ~~l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
+++++|+..||.+++.+|++++.....++.++++.|...+...+. ++|++||+++|+++|+
T Consensus 209 ----------------~~a~~ia~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~eg~~af~ekr~ 269 (275)
T PLN02664 209 ----------------LIAEGIAAKSPLAVTGTKAVLLRSRELSVEQGLDYVATWNSAMLV---SDDLNEAVSAQIQKRK 269 (275)
T ss_pred ----------------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcc---ChhHHHHHHHHhccCC
Confidence 348899999999999999999988888999999999998888877 9999999999999985
No 12
>KOG1680 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=100.00 E-value=6.9e-56 Score=377.34 Aligned_cols=235 Identities=26% Similarity=0.325 Sum_probs=210.7
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||+++|+++..|+.+|.+++..+++|+.++++||||.|++||+|+|++++....... -... .+.+.+..
T Consensus 49 lItlNRP~~~Nal~~~~m~eL~~A~~~~e~D~s~~viVltG~gksFcsG~Dl~e~~~~~~~~---~~~~---~~~~~~~~ 122 (290)
T KOG1680|consen 49 LITLNRPKALNALCRATMLELAEAFKDFESDDSVGVIVLTGSGKSFCSGADLKEMKKDEFQD---VSDG---IFLRVWDL 122 (290)
T ss_pred EEEeCChHHhccccHHHHHHHHHHHHHhhccCcccEEEEEcCCCccccccCHHHHhhccccc---cccc---cccchhhh
Confidence 48999999999999999999999999999999999999999999999999999986532111 0011 11223334
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE 159 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e 159 (312)
+.+.+||+||+|||+|+|||++|++.||+|||+++|+|++|+.++|++|.+|++.+|+|.+|.. |+++++||++++|+|
T Consensus 123 ~~~~~KPvIaainG~AlgGG~ELalmCDirva~~~Akfg~~~~~~Gi~p~~GGT~rl~r~vG~s~Ale~~ltg~~~~Aqe 202 (290)
T KOG1680|consen 123 VSRLKKPVIAAINGFALGGGLELALMCDIRVAGEGAKFGFFEIRMGIIPSWGGTQRLPRIVGKSRALEMILTGRRLGAQE 202 (290)
T ss_pred hhhcccceeEeeeceeeccchhhhhhcceEeccCCCeecccccccCCccCCCchhhHHHHhChHHHHHHHHhcCcccHHH
Confidence 4479999999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410 160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS 239 (312)
Q Consensus 160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 239 (312)
|+++||||+|+|.+++...+.
T Consensus 203 A~~~GlVn~Vvp~~~~l~eAv----------------------------------------------------------- 223 (290)
T KOG1680|consen 203 AKKIGLVNKVVPSGDALGEAV----------------------------------------------------------- 223 (290)
T ss_pred HHhCCceeEeecchhHHHHHH-----------------------------------------------------------
Confidence 999999999999988653333
Q ss_pred CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
+++++|+++||.+++..|+.++.+.+.++.++++.|...+...+. .+|.+|||.+|.++|.
T Consensus 224 --------~l~~~Ia~~~~~~v~~~K~svn~~~e~~l~e~l~~e~~~~~s~~~---~~d~~Eg~~~f~~kr~ 284 (290)
T KOG1680|consen 224 --------KLAEQIAKNSPLVVRADKESVNAAYETTLFEGLELERDLFGSTFA---TEDRLEGMTAFAEKRK 284 (290)
T ss_pred --------HHHHHHHhCCHHHHHHHHHHHHHHhhccHHHHHHhhhhhhhhhhh---hHHHHHHHHHhcccCC
Confidence 348999999999999999999999999999999999999999888 9999999999999885
No 13
>PRK06142 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=6.9e-55 Score=389.31 Aligned_cols=241 Identities=23% Similarity=0.294 Sum_probs=214.8
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhc-------cCChHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMN-------QGKLEECKDFFRT 73 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~-------~~~~~~~~~~~~~ 73 (312)
+||||||++.|++|.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++..... .........+...
T Consensus 18 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (272)
T PRK06142 18 QVTLNRPGKGNAMNPAFWSELPEIFRWLDADPEVRAVVLSGSGKHFSYGIDLPAMAGVFGQLGKDGLARPRTDLRREILR 97 (272)
T ss_pred EEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCceecccCHHHHhhhcccccccccccchHHHHHHHHH
Confidence 589999999999999999999999999999999999999999999999999998754210 0011222233445
Q ss_pred HHHHHHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcC
Q 021410 74 LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTG 152 (312)
Q Consensus 74 ~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg 152 (312)
+.+++..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +++++++|
T Consensus 98 ~~~~~~~i~~~~kpvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l~l~g 177 (272)
T PRK06142 98 LQAAINAVADCRKPVIAAVQGWCIGGGVDLISACDMRYASADAKFSVREVDLGMVADVGSLQRLPRIIGDGHLRELALTG 177 (272)
T ss_pred HHHHHHHHHhCCCCEEEEecCccccchHHHHHhCCEEEecCCCeecchhhhhCCCCCchHHHHHHHHhCHHHHHHHHHhC
Confidence 56778889999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred CCCCHHHHHHcCccceecCC-CChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHH
Q 021410 153 AKLNGAEMMACGLATHYSVS-EKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEII 231 (312)
Q Consensus 153 ~~i~a~eA~~~Glv~~vv~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (312)
++++|+||+++||||+|+|+ +++.+.+.+
T Consensus 178 ~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~-------------------------------------------------- 207 (272)
T PRK06142 178 RDIDAAEAEKIGLVNRVYDDADALLAAAHA-------------------------------------------------- 207 (272)
T ss_pred CCcCHHHHHHcCCccEecCCHHHHHHHHHH--------------------------------------------------
Confidence 99999999999999999986 666544433
Q ss_pred HHHHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 232 DSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 232 ~~l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
.+++|++.||.+++.+|++++.....+++++++.|...+..++. ++|++||+.+|+++|+
T Consensus 208 -----------------~a~~ia~~~~~a~~~~K~~l~~~~~~~l~~~~~~~~~~~~~~~~---~~d~~egv~af~~kr~ 267 (272)
T PRK06142 208 -----------------TAREIAAKSPLAVRGTKEVLDYMRDHRVADGLRYVATWNAAMLP---SKDLTEAIAAHMEKRP 267 (272)
T ss_pred -----------------HHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---CccHHHHHHHHhcCCC
Confidence 37899999999999999999988888999999999999988887 9999999999999985
No 14
>PRK05862 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=7.4e-55 Score=386.00 Aligned_cols=235 Identities=25% Similarity=0.323 Sum_probs=212.2
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||++.|++|.+|+.+|.+++++++.|+++|+|||+|.|++||+|+|++++... +. ...+...+..++..
T Consensus 16 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~----~~--~~~~~~~~~~~~~~ 89 (257)
T PRK05862 16 LITLNRPKALNALNDALMDELGAALAAFDADEGIGAIVITGSEKAFAAGADIKEMADL----SF--MDVYKGDYITNWEK 89 (257)
T ss_pred EEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCCCceECCcChHhHhcc----ch--hHHHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999987532 11 11122333456778
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE 159 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e 159 (312)
|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +.+|++||+.++|+|
T Consensus 90 l~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~e 169 (257)
T PRK05862 90 VARIRKPVIAAVAGYALGGGCELAMMCDIIIAADTAKFGQPEIKLGVLPGMGGSQRLTRAVGKAKAMDLCLTGRMMDAAE 169 (257)
T ss_pred HHhCCCCEEEEEccEEeHHHHHHHHHCCEEEEeCCCEEeCchhccCcCCCccHHHHHHHHhCHHHHHHHHHhCCccCHHH
Confidence 8999999999999999999999999999999999999999999999999999999999999998 999999999999999
Q ss_pred HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410 160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS 239 (312)
Q Consensus 160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 239 (312)
|+++||||+++|++++.+.+..
T Consensus 170 A~~~Glv~~vv~~~~l~~~a~~---------------------------------------------------------- 191 (257)
T PRK05862 170 AERAGLVSRVVPADKLLDEALA---------------------------------------------------------- 191 (257)
T ss_pred HHHcCCCCEeeCHhHHHHHHHH----------------------------------------------------------
Confidence 9999999999998877654443
Q ss_pred CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
.++++++.+|.+++.+|++++.....++.++++.|.+.+..++. ++|++||+++|+++|+
T Consensus 192 ---------~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---s~~~~e~i~af~~kr~ 251 (257)
T PRK05862 192 ---------AATTIASFSLPAVMMAKEAVNRAYETTLAEGLLFERRLFHSLFA---TEDQKEGMAAFVEKRK 251 (257)
T ss_pred ---------HHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---ChhHHHHHHHHhccCC
Confidence 37889999999999999999998888999999999999999888 9999999999999885
No 15
>PRK09076 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.4e-54 Score=384.38 Aligned_cols=236 Identities=21% Similarity=0.267 Sum_probs=213.2
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY 79 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (312)
+||||||++ |++|.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++... +......+...+..++.
T Consensus 15 ~itlnrp~~-Nal~~~~~~~l~~al~~~~~d~~vrvvVl~g~g~~~F~aG~Dl~~~~~~----~~~~~~~~~~~~~~~~~ 89 (258)
T PRK09076 15 ILTLNNPPA-NTWTADSLQALKQLVLELNADKDVYALVITGDGEKFFSAGADLNLFADG----DKAVAREMARRFGEAFE 89 (258)
T ss_pred EEEECCCCc-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCceEeCcCHHHHhhc----ChhhHHHHHHHHHHHHH
Confidence 589999986 999999999999999999999999999999999 789999999987531 12222334445567788
Q ss_pred HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410 80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA 158 (312)
Q Consensus 80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~ 158 (312)
.+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++++++||+.++|+
T Consensus 90 ~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~l~l~g~~~~a~ 169 (258)
T PRK09076 90 ALSAFRGVSIAAINGYAMGGGLECALACDIRIAEEQAQMALPEASVGLLPCAGGTQNLPWLVGEGWAKRMILCGERVDAA 169 (258)
T ss_pred HHHhCCCCEEEEECCEEecHHHHHHHhCCEEEecCCCEeeCcccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410 159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA 238 (312)
Q Consensus 159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 238 (312)
||+++||||+|+|++++.+.+.
T Consensus 170 eA~~~Glv~~vv~~~~l~~~a~---------------------------------------------------------- 191 (258)
T PRK09076 170 TALRIGLVEEVVEKGEAREAAL---------------------------------------------------------- 191 (258)
T ss_pred HHHHCCCCceecCchhHHHHHH----------------------------------------------------------
Confidence 9999999999999887764333
Q ss_pred CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
+++++|+..||.+++.+|++++.....++++.++.|...+..++. ++|++||+++|+++|+
T Consensus 192 ---------~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~eg~~af~~kr~ 252 (258)
T PRK09076 192 ---------ALAQKVANQSPSAVAACKTLIQAARNGPRAAALALERELFVDLFD---TEDQREGVNAFLEKRA 252 (258)
T ss_pred ---------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---CchHHHHHHHHhcCCC
Confidence 348899999999999999999988888899999999999998887 9999999999999885
No 16
>PRK07260 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=6.9e-55 Score=385.78 Aligned_cols=241 Identities=23% Similarity=0.356 Sum_probs=216.5
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||++.|++|.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++.......+......+...+++++..
T Consensus 14 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (255)
T PRK07260 14 TLTLNRPEVSNGFNIPMCQEILEALRLAEEDPSVRFLLINANGKVFSVGGDLVEMKRAVDEDDVQSLVKIAELVNEISFA 93 (255)
T ss_pred EEEeCCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcccccCHHHHHhhccccchhhHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999876432112222222344455677888
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE 159 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e 159 (312)
+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++|.. +++|+++|++++|+|
T Consensus 94 l~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g~~~sa~e 173 (255)
T PRK07260 94 IKQLPKPVIMCVDGAVAGAAANMAVAADFCIASTKTKFIQAFVGVGLAPDAGGLFLLTRAIGLNRATHLAMTGEALTAEK 173 (255)
T ss_pred HHcCCCCEEEEecCeeehhhHHHHHhCCEEEEeCCCEEechHhhcCCCCCCchhhhhHHhhCHHHHHHHHHhCCccCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999998 999999999999999
Q ss_pred HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410 160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS 239 (312)
Q Consensus 160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 239 (312)
|+++||||+++|++++.+.+..
T Consensus 174 A~~~Glv~~vv~~~~l~~~a~~---------------------------------------------------------- 195 (255)
T PRK07260 174 ALEYGFVYRVAESEKLEKTCEQ---------------------------------------------------------- 195 (255)
T ss_pred HHHcCCcceecCHhHHHHHHHH----------------------------------------------------------
Confidence 9999999999998877654443
Q ss_pred CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
.++++++.||.+++.+|+.++.....++++.++.|...+..++. ++|++||+++|+++|+
T Consensus 196 ---------~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~e~~~af~~kr~ 255 (255)
T PRK07260 196 ---------LLKKLRRGSSNSYAAIKSLVWESFFKGWEDYAKLELALQESLAF---KEDFKEGVRAFSERRR 255 (255)
T ss_pred ---------HHHHHHcCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHhcCC
Confidence 38899999999999999999998888999999999999988887 9999999999999875
No 17
>PRK08150 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.3e-54 Score=383.61 Aligned_cols=235 Identities=26% Similarity=0.253 Sum_probs=211.4
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||++.|++|.+|+.+|.++++.++ +++|+|||||.|++||+|+|++++... +......+...++.++..
T Consensus 14 ~itlnrp~~~Nal~~~~~~~l~~al~~~~--~~vr~vvltg~g~~F~aG~Dl~~~~~~----~~~~~~~~~~~~~~~~~~ 87 (255)
T PRK08150 14 TIGLNRPAKRNALNDGLIAALRAAFARLP--EGVRAVVLHGEGDHFCAGLDLSELRER----DAGEGMHHSRRWHRVFDK 87 (255)
T ss_pred EEEEcCCccccCCCHHHHHHHHHHHHHhh--cCCeEEEEECCCCceecCcCHHHHhhc----cchhHHHHHHHHHHHHHH
Confidence 58999999999999999999999999997 789999999999999999999987532 111222334455677888
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE 159 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e 159 (312)
+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++++++++|.. +.+|++||+.++|+|
T Consensus 88 l~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~l~ltg~~~~a~e 167 (255)
T PRK08150 88 IQYGRVPVIAALHGAVVGGGLELASAAHIRVADESTYFALPEGQRGIFVGGGGSVRVPRLIGVARMTDMMLTGRVYDAQE 167 (255)
T ss_pred HHhCCCCEEEEECCEEEcHHHHHHHhCCEEEEeCCCEEeccccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410 160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS 239 (312)
Q Consensus 160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 239 (312)
|+++||||+++|++++.+.+.+
T Consensus 168 A~~~Glv~~vv~~~~l~~~a~~---------------------------------------------------------- 189 (255)
T PRK08150 168 GERLGLAQYLVPAGEALDKAME---------------------------------------------------------- 189 (255)
T ss_pred HHHcCCccEeeCchHHHHHHHH----------------------------------------------------------
Confidence 9999999999998887654443
Q ss_pred CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
.+++|++.||.+++.+|++++.....+++++++.|...+...+. ++|++||+++|+++|.
T Consensus 190 ---------~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---s~d~~eg~~af~~kr~ 249 (255)
T PRK08150 190 ---------LARRIAQNAPLTNFAVLNALPRIADMSADDGLFVESLMAAVAQS---APEAKERLRAFLEKKA 249 (255)
T ss_pred ---------HHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHhccCC
Confidence 38999999999999999999988888899999999988877777 9999999999999885
No 18
>PRK09674 enoyl-CoA hydratase-isomerase; Provisional
Probab=100.00 E-value=9.1e-55 Score=384.87 Aligned_cols=235 Identities=23% Similarity=0.302 Sum_probs=212.6
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++... +. ...+......++..
T Consensus 14 ~itlnrp~~~Nal~~~~~~~L~~~~~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~----~~--~~~~~~~~~~~~~~ 87 (255)
T PRK09674 14 LLTLNRPEARNALNNALLTQLVNELEAAATDTSIGVCVITGNARFFAAGADLNEMAEK----DL--AATLNDPRPQLWQR 87 (255)
T ss_pred EEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCceecccChHhHhcc----ch--hhhHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999987531 11 11122334457778
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE 159 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e 159 (312)
+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +.+++++|+.++|+|
T Consensus 88 l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ig~~~a~~l~l~g~~~~a~e 167 (255)
T PRK09674 88 LQAFNKPLIAAVNGYALGAGCELALLCDIVIAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSLASQMVLTGESITAQQ 167 (255)
T ss_pred HHhCCCCEEEEECCEeehHHHHHHHhCCEEEecCCCEEeCchhhcCCCCCccHHHHHHHHhCHHHHHHHHHcCCccCHHH
Confidence 8999999999999999999999999999999999999999999999999999999999999998 999999999999999
Q ss_pred HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410 160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS 239 (312)
Q Consensus 160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 239 (312)
|+++||||+|+|++++.+.+.
T Consensus 168 A~~~Glv~~vv~~~~~~~~a~----------------------------------------------------------- 188 (255)
T PRK09674 168 AQQAGLVSEVFPPELTLERAL----------------------------------------------------------- 188 (255)
T ss_pred HHHcCCCcEecChHHHHHHHH-----------------------------------------------------------
Confidence 999999999999887764333
Q ss_pred CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
+.+++|+..||.+++.+|++++.....++.++++.|.+.+..++. ++|++||+++|+++|+
T Consensus 189 --------~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~e~i~af~~kr~ 249 (255)
T PRK09674 189 --------QLASKIARHSPLALRAAKQALRQSQEVDLQAGLAQERQLFTLLAA---TEDRHEGISAFLEKRT 249 (255)
T ss_pred --------HHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHhccCC
Confidence 348999999999999999999988888999999999999999887 9999999999999885
No 19
>PRK06563 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1e-54 Score=384.66 Aligned_cols=237 Identities=20% Similarity=0.187 Sum_probs=209.4
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHH-HHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTL-YSFIY 79 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 79 (312)
+||||||++.|++|.+|+.+|.+++++++.|+++|+|||+|.|++||+|+|++++....... ...+.... ..+..
T Consensus 11 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vrvvvl~g~g~~F~aG~Dl~~~~~~~~~~----~~~~~~~~~~~~~~ 86 (255)
T PRK06563 11 LIGLDRPAKRNAFDSAMLDDLALALGEYEADDELRVAVLFAHGEHFTAGLDLADVAPKLAAG----GFPFPEGGIDPWGT 86 (255)
T ss_pred EEEECCcccccCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCCCcCCcCHHHHhhccccc----hhhhhhhhhHHHHH
Confidence 58999999999999999999999999999999999999999999999999999875421111 11111111 22233
Q ss_pred HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410 80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA 158 (312)
Q Consensus 80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~ 158 (312)
.+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++++++||+.++|+
T Consensus 87 ~l~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~ 166 (255)
T PRK06563 87 VGRRLSKPLVVAVQGYCLTLGIELMLAADIVVAADNTRFAQLEVQRGILPFGGATLRFPQAAGWGNAMRYLLTGDEFDAQ 166 (255)
T ss_pred HHhcCCCCEEEEEcCeeecHHHHHHHhCCEEEecCCCEEeChhhhcCCCCCccHHHHHHHHhhHHHHHHHHHcCCCcCHH
Confidence 57889999999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410 159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA 238 (312)
Q Consensus 159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 238 (312)
||+++||||+|+|++++.+.+.+
T Consensus 167 eA~~~Glv~~vv~~~~l~~~a~~--------------------------------------------------------- 189 (255)
T PRK06563 167 EALRLGLVQEVVPPGEQLERAIE--------------------------------------------------------- 189 (255)
T ss_pred HHHHcCCCcEeeCHHHHHHHHHH---------------------------------------------------------
Confidence 99999999999998877644433
Q ss_pred CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
.+++|++.||.+++.+|++++.....++.++++.|...+..++. ++|++||+++|+++|+
T Consensus 190 ----------~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~eg~~af~~kr~ 249 (255)
T PRK06563 190 ----------LAERIARAAPLGVQATLASARAAVREGEAAAAAQLPPELRPLFT---SEDAKEGVQAFLERRP 249 (255)
T ss_pred ----------HHHHHHhcCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---CchHHHHHHHHhcCCC
Confidence 37899999999999999999988888999999999999988887 9999999999999985
No 20
>TIGR02280 PaaB1 phenylacetate degradation probable enoyl-CoA hydratase paaB. This family of proteins are found within apparent operons for the degradation of phenylacetic acid. These proteins contain the enoyl-CoA hydratase domain as detected by pfam00378. This activity is consistent with current hypotheses for the degradation pathway which involve the ligation of phenylacetate with coenzyme A (paaF), hydroxylation (paaGHIJK), ring-opening (paaN) and degradation of the resulting fatty acid-like compound to a Krebs cycle intermediate (paaABCDE).
Probab=100.00 E-value=1.7e-54 Score=383.49 Aligned_cols=239 Identities=23% Similarity=0.297 Sum_probs=212.1
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||++.|++|.+|+.+|.++++.++.|+ +|+|||||.|++||+|+|++++.... ....+....+...+..++..
T Consensus 11 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~-v~~vVltg~g~~F~aG~Dl~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 88 (256)
T TIGR02280 11 RLTLNRPDKLNSFTAEMHLELREALERVERDD-ARALMLTGAGRGFCAGQDLSERNPTP-GGAPDLGRTIETFYNPLVRR 88 (256)
T ss_pred EEEecCcccccCCCHHHHHHHHHHHHHHhcCC-cEEEEEECCCCCcccCcCHHHHhhcc-ccchhHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999 99999999999999999999875321 11111111222223456778
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE 159 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e 159 (312)
+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +++|+++|++++|+|
T Consensus 89 l~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~lG~~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~e 168 (256)
T TIGR02280 89 LRALPLPVVCAVNGVAAGAGANLALACDIVLAAESARFIQAFAKIGLIPDSGGTWSLPRLVGRARAMGLAMLGEKLDART 168 (256)
T ss_pred HHhCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEEeChhhhcCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHH
Confidence 8899999999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410 160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS 239 (312)
Q Consensus 160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 239 (312)
|+++||||+++|++++.+.+.+
T Consensus 169 A~~~Glv~~vv~~~~l~~~a~~---------------------------------------------------------- 190 (256)
T TIGR02280 169 AASWGLIWQVVDDAALMDEAQA---------------------------------------------------------- 190 (256)
T ss_pred HHHcCCcceeeChHHHHHHHHH----------------------------------------------------------
Confidence 9999999999998877654443
Q ss_pred CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
.+++|++.||.+++.+|++++......+.++++.|...+..++. ++|++||+.+|+++|+
T Consensus 191 ---------~a~~la~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~eg~~af~~kr~ 250 (256)
T TIGR02280 191 ---------LAVHLAAQPTRGLALTKRAIQAAATNSLDTQLDLERDLQRELGR---SADYAEGVTAFLDKRN 250 (256)
T ss_pred ---------HHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhc---ChhHHHHHHHHHcCCC
Confidence 37899999999999999999988888999999999999988887 9999999999999885
No 21
>PRK07657 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.1e-54 Score=383.71 Aligned_cols=237 Identities=22% Similarity=0.335 Sum_probs=215.9
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY 79 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (312)
+||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++... +......+...++.++.
T Consensus 16 ~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~----~~~~~~~~~~~~~~~~~ 91 (260)
T PRK07657 16 KITLNRPRAANALSLALLEELQNILTQINEEANVRVVILTGAGEKAFCAGADLKERAGM----NEEQVRHAVSLIRTTME 91 (260)
T ss_pred EEEEeCCcccCCCCHHHHHHHHHHHHHHHhCCCeEEEEEecCCCCceEcCcChHhhhcC----ChhhHHHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999 599999999987531 12233444555677888
Q ss_pred HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410 80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA 158 (312)
Q Consensus 80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~ 158 (312)
.+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +.++++||++++|+
T Consensus 92 ~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~ 171 (260)
T PRK07657 92 MVEQLPQPVIAAINGIALGGGLELALACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVGRAKELIYTGRRISAQ 171 (260)
T ss_pred HHHhCCCCEEEEEcCEeechHHHHHHhCCEEEeeCCCEEcCchhccCcCCCccHHHHHHHHhCHHHHHHHHHhCCCCCHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410 159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA 238 (312)
Q Consensus 159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 238 (312)
||+++||||+++|++++.+.+.+
T Consensus 172 eA~~~Glv~~vv~~~~l~~~a~~--------------------------------------------------------- 194 (260)
T PRK07657 172 EAKEIGLVEFVVPAHLLEEKAIE--------------------------------------------------------- 194 (260)
T ss_pred HHHHcCCCCeecCHHHHHHHHHH---------------------------------------------------------
Confidence 99999999999998887654443
Q ss_pred CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
.+++++..+|.+++.+|++++.....+++++++.|...+..++. ++|++||+++|+++|+
T Consensus 195 ----------~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~e~~~af~~~r~ 254 (260)
T PRK07657 195 ----------IAEKIASNGPIAVRQAKEAISNGIQVDLHTGLQIEKQAYEGTIP---TKDRLEGLQAFKEKRK 254 (260)
T ss_pred ----------HHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhc---CHhHHHHHHHHhcCCC
Confidence 37899999999999999999988888999999999999999888 9999999999999885
No 22
>PRK05809 3-hydroxybutyryl-CoA dehydratase; Validated
Probab=100.00 E-value=2e-54 Score=383.95 Aligned_cols=237 Identities=28% Similarity=0.376 Sum_probs=214.9
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY 79 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (312)
+||||||++.|++|.+|+.+|.+++++++.|+++|+|||+|.| ++||+|+|++++... +......+......++.
T Consensus 16 ~itlnrp~~~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~~F~aG~Dl~~~~~~----~~~~~~~~~~~~~~~~~ 91 (260)
T PRK05809 16 VVTINRPKALNALNSETLKELDTVLDDIENDDNVYAVILTGAGEKAFVAGADISEMKDL----NEEEGRKFGLLGNKVFR 91 (260)
T ss_pred EEEECCCcccCCCCHHHHHHHHHHHHHHhcCCCcEEEEEEcCCCCceeeCcChHhHhcc----ChHHHHHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999 999999999987532 12222234444556788
Q ss_pred HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410 80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA 158 (312)
Q Consensus 80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~ 158 (312)
.+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +.++++||+.++|+
T Consensus 92 ~l~~~~kPvIaav~G~a~GgG~~lal~cD~~va~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~ 171 (260)
T PRK05809 92 KLENLDKPVIAAINGFALGGGCELSMACDIRIASEKAKFGQPEVGLGITPGFGGTQRLARIVGPGKAKELIYTGDMINAE 171 (260)
T ss_pred HHHcCCCCEEEEEcCeeecHHHHHHHhCCEEEeeCCCEEeCcccccCCCCCccHHHHHHHHhCHHHHHHHHHhCCCCCHH
Confidence 89999999999999999999999999999999999999999999999999999999999999998 99999999999999
Q ss_pred HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410 159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA 238 (312)
Q Consensus 159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 238 (312)
||+++||||+|+|++++.+.+.
T Consensus 172 eA~~~Glv~~vv~~~~l~~~a~---------------------------------------------------------- 193 (260)
T PRK05809 172 EALRIGLVNKVVEPEKLMEEAK---------------------------------------------------------- 193 (260)
T ss_pred HHHHcCCCCcccChHHHHHHHH----------------------------------------------------------
Confidence 9999999999999877654333
Q ss_pred CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
+.+++++..||.+++.+|++++.....+++++++.|.+.+..++. ++|++||+++|+++|+
T Consensus 194 ---------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~egi~af~~~r~ 254 (260)
T PRK05809 194 ---------ALANKIAANAPIAVKLCKDAINRGMQVDIDTAVAIEAEDFGECFS---TEDQTEGMTAFVEKRE 254 (260)
T ss_pred ---------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHhcCCC
Confidence 348899999999999999999998888999999999999999998 9999999999999885
No 23
>PRK07799 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.2e-54 Score=384.27 Aligned_cols=239 Identities=24% Similarity=0.275 Sum_probs=209.4
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHH-HHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDF-FRTLYSFIY 79 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 79 (312)
+||||||+++|++|.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++.... ..+......+ ...+.. +.
T Consensus 17 ~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~-~~~~~~~~~~~~~~~~~-~~ 94 (263)
T PRK07799 17 IVTMNRPEARNALSTEMLRIMVDAWDRVDNDPDIRSCILTGAGGAFCAGMDLKAATKKP-PGDSFKDGSYDPSRIDA-LL 94 (263)
T ss_pred EEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCccccccCHHHHhhcc-ccchhhhhhhhhhHHHH-HH
Confidence 58999999999999999999999999999999999999999999999999999876421 1110000001 111222 23
Q ss_pred HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410 80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA 158 (312)
Q Consensus 80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~ 158 (312)
.+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +.+|++||++++|+
T Consensus 95 ~~~~~~kpvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ltg~~~~a~ 174 (263)
T PRK07799 95 KGRRLTKPLIAAVEGPAIAGGTEILQGTDIRVAGESAKFGISEAKWSLFPMGGSAVRLVRQIPYTVACDLLLTGRHITAA 174 (263)
T ss_pred HHhcCCCCEEEEECCeEeccHHHHHHhCCEEEecCCCEecCcccccCcCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410 159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA 238 (312)
Q Consensus 159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 238 (312)
||+++||||+|+|++++.+.+.
T Consensus 175 eA~~~Glv~~vv~~~~l~~~a~---------------------------------------------------------- 196 (263)
T PRK07799 175 EAKEIGLIGHVVPDGQALDKAL---------------------------------------------------------- 196 (263)
T ss_pred HHHHcCCccEecCcchHHHHHH----------------------------------------------------------
Confidence 9999999999999888764333
Q ss_pred CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
+.+++|++.||.+++.+|++++.....++.++++.|.+.+..++. ++|++||+++|+++|+
T Consensus 197 ---------~~a~~~~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~~~~egi~af~~~r~ 257 (263)
T PRK07799 197 ---------ELAELINANGPLAVQAILRTIRETEGMHENEAFKIDTKIGIPVFL---SEDAKEGPRAFAEKRA 257 (263)
T ss_pred ---------HHHHHHHhcChHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---CccHHHHHHHHHccCC
Confidence 237899999999999999999988888999999999999988887 9999999999999885
No 24
>PRK08258 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.9e-54 Score=387.10 Aligned_cols=241 Identities=21% Similarity=0.286 Sum_probs=215.4
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.......+......+.....+++..
T Consensus 29 ~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (277)
T PRK08258 29 TITLNRPERKNPLTFESYAELRDLFRELVYADDVKAVVLTGAGGNFCSGGDVHEIIGPLTKMDMPELLAFTRMTGDLVKA 108 (277)
T ss_pred EEEeCCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEeCCCCCcccccCHHHHhccccccChhHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999874321111222233444555678888
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccC-CCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHP-DAGASFYLSHLPGHL-GEFLALTGAKLNGA 158 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p-~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~ 158 (312)
+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++| ++|++++|++++|.. +++|+++|++++|+
T Consensus 109 l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~ 188 (277)
T PRK08258 109 MRACPQPIIAAVDGVCAGAGAILAMASDLRLGTPSAKTAFLFTRVGLAGADMGACALLPRIIGQGRASELLYTGRSMSAE 188 (277)
T ss_pred HHhCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEEeccccccCcCCCCchHHHHHHHHhCHHHHHHHHHcCCCCCHH
Confidence 9999999999999999999999999999999999999999999999995 788999999999999 99999999999999
Q ss_pred HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410 159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA 238 (312)
Q Consensus 159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 238 (312)
||+++||||+|+|++++.+.+.+
T Consensus 189 eA~~~Glv~~vv~~~~l~~~a~~--------------------------------------------------------- 211 (277)
T PRK08258 189 EGERWGFFNRLVEPEELLAEAQA--------------------------------------------------------- 211 (277)
T ss_pred HHHHcCCCcEecCHHHHHHHHHH---------------------------------------------------------
Confidence 99999999999998777654443
Q ss_pred CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
.+++|+..||.+++.+|++++.....++++.++.|...+..++. ++|++||+++|+++|.
T Consensus 212 ----------~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---s~d~~eg~~af~ekr~ 271 (277)
T PRK08258 212 ----------LARRLAAGPTFAHGMTKTMLHQEWDMGLEEAIEAEAQAQAICMQ---TEDFRRAYEAFVAKRK 271 (277)
T ss_pred ----------HHHHHHhCCHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhc---CchHHHHHHHHhcCCC
Confidence 37899999999999999999988888999999999999999888 9999999999999985
No 25
>PRK08140 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.2e-54 Score=384.14 Aligned_cols=240 Identities=23% Similarity=0.294 Sum_probs=211.9
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||++.|++|.+|+.+|.+++++++ |+++|+|||+|.|++||+|+|++++..............+...+..++..
T Consensus 16 ~itlnrp~~~Nal~~~~~~~l~~~~~~~~-d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (262)
T PRK08140 16 TLTLNRPDKLNSFTREMHRELREALDQVE-DDGARALLLTGAGRGFCAGQDLADRDVTPGGAMPDLGESIETFYNPLVRR 94 (262)
T ss_pred EEEecCCcccCCCCHHHHHHHHHHHHHhc-CCCceEEEEECCCCCcccCcChHHHhccccccchhhHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999 99999999999999999999999874321001111111222223456778
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE 159 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e 159 (312)
+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +++|++||++++|+|
T Consensus 95 l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~e 174 (262)
T PRK08140 95 LRALPLPVIAAVNGVAAGAGANLALACDIVLAARSASFIQAFVKIGLVPDSGGTWFLPRLVGMARALGLALLGEKLSAEQ 174 (262)
T ss_pred HHhCCCCEEEEECCeeehhHHHHHHhCCEEEecCCCEEeccccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCCcCHHH
Confidence 8899999999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410 160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS 239 (312)
Q Consensus 160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 239 (312)
|+++||||+|+|++++.+.+.+
T Consensus 175 A~~~Glv~~vv~~~~l~~~a~~---------------------------------------------------------- 196 (262)
T PRK08140 175 AEQWGLIWRVVDDAALADEAQQ---------------------------------------------------------- 196 (262)
T ss_pred HHHcCCccEeeChHHHHHHHHH----------------------------------------------------------
Confidence 9999999999998877644433
Q ss_pred CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
.+++|++.||.+++.+|++++.....++.++++.|...+..++. ++|++||+.+|+++|+
T Consensus 197 ---------~a~~ia~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~e~~~af~~kr~ 256 (262)
T PRK08140 197 ---------LAAHLATQPTRGLALIKQAMNASATNTLDAQLDLERDLQREAGR---SADYAEGVSAFLEKRA 256 (262)
T ss_pred ---------HHHHHHhCCHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHhc---ChhHHHHHHHHhcCCC
Confidence 38999999999999999999988888999999999999988887 9999999999999985
No 26
>PRK08139 enoyl-CoA hydratase; Validated
Probab=100.00 E-value=3e-54 Score=383.45 Aligned_cols=237 Identities=20% Similarity=0.267 Sum_probs=213.5
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++... ...+....++..+.+++..
T Consensus 23 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~---~~~~~~~~~~~~~~~~~~~ 99 (266)
T PRK08139 23 TLTLNRPQAFNALSEAMLAALQAALDAIAADPSVRVVVLAAAGKAFCAGHDLKEMRAA---RGLAYFRALFARCSRVMQA 99 (266)
T ss_pred EEEeCCcccccCCCHHHHHHHHHHHHHHhcCCCeeEEEEecCCCcceeccCHHHHhcc---cchhHHHHHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999987532 1122233445556678888
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE 159 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e 159 (312)
+.++||||||+|||+|+|||++|+++|||||++++++|++||+++|++|+++ +++|+|++|.. ++++++||++++|+|
T Consensus 100 l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~~-~~~l~r~vG~~~A~~l~ltg~~~~a~e 178 (266)
T PRK08139 100 IVALPQPVIARVHGIATAAGCQLVASCDLAVAADTARFAVPGVNIGLFCSTP-MVALSRNVPRKQAMEMLLTGEFIDAAT 178 (266)
T ss_pred HHhCCCCEEEEECceeeHHHHHHHHhCCEEEEeCCCEEeCcccCcCCCCCcc-HHHHHHHhCHHHHHHHHHcCCccCHHH
Confidence 9999999999999999999999999999999999999999999999999765 56899999999 999999999999999
Q ss_pred HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410 160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS 239 (312)
Q Consensus 160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 239 (312)
|+++||||+|+|++++.+.+.+
T Consensus 179 A~~~GLv~~vv~~~~l~~~a~~---------------------------------------------------------- 200 (266)
T PRK08139 179 AREWGLVNRVVPADALDAAVAR---------------------------------------------------------- 200 (266)
T ss_pred HHHcCCccEeeChhHHHHHHHH----------------------------------------------------------
Confidence 9999999999998887654443
Q ss_pred CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
.+++|++.||.+++.+|++++.....+++++++.|...+..++. ++|++||+++|+++|+
T Consensus 201 ---------~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~eg~~af~~kr~ 260 (266)
T PRK08139 201 ---------LAAVIAAKSPAAVRIGKEAFYRQAEMPLADAYAYAGDVMAENMM---AEDAEEGIDAFLEKRP 260 (266)
T ss_pred ---------HHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhc---CchHHHHHHHHhcCCC
Confidence 37999999999999999999998888999999999999988887 9999999999999885
No 27
>PRK08138 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.6e-54 Score=383.16 Aligned_cols=235 Identities=26% Similarity=0.368 Sum_probs=213.1
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||+++|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++... . ....+....+.++..
T Consensus 20 ~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~---~---~~~~~~~~~~~~~~~ 93 (261)
T PRK08138 20 LLRLNRPEARNALNMEVRQQLAEHFTELSEDPDIRAIVLTGGEKVFAAGADIKEFATA---G---AIEMYLRHTERYWEA 93 (261)
T ss_pred EEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCCCCeeCCcCHHHHhcc---c---hhHHHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999987531 1 111233445667888
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE 159 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e 159 (312)
+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +.+|+++|+.++|+|
T Consensus 94 l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~e 173 (261)
T PRK08138 94 IAQCPKPVIAAVNGYALGGGCELAMHADIIVAGESASFGQPEIKVGLMPGAGGTQRLVRAVGKFKAMRMALTGCMVPAPE 173 (261)
T ss_pred HHhCCCCEEEEEccEEEcHHHHHHHhCCEEEecCCCEeeCcccccccCCCCcHHHHHHHHhCHHHHHHHHHcCCCCCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410 160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS 239 (312)
Q Consensus 160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 239 (312)
|+++||||+|+|++++.+.+.+
T Consensus 174 A~~~Glv~~vv~~~~l~~~a~~---------------------------------------------------------- 195 (261)
T PRK08138 174 ALAIGLVSEVVEDEQTLPRALE---------------------------------------------------------- 195 (261)
T ss_pred HHHCCCCcEecCchHHHHHHHH----------------------------------------------------------
Confidence 9999999999998887644333
Q ss_pred CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
.++++++.||.+++.+|++++.....+++++++.|.+.+..++. ++|++||+++|+++|.
T Consensus 196 ---------~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~~~i~af~~kr~ 255 (261)
T PRK08138 196 ---------LAREIARMPPLALAQIKEVVLAGADAPLDAALALERKAFQLLFD---SEDQKEGMDAFLEKRK 255 (261)
T ss_pred ---------HHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHhcCCC
Confidence 37888999999999999999988888999999999999998888 9999999999999885
No 28
>PRK06127 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.1e-54 Score=384.19 Aligned_cols=239 Identities=22% Similarity=0.311 Sum_probs=216.0
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY 79 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (312)
+||||||+++|++|.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++.... .+.+....+....+.++.
T Consensus 23 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~--~~~~~~~~~~~~~~~~~~ 100 (269)
T PRK06127 23 RITFNNPARHNAMSLDMWEALPQALAAAEDDDAIRVVVLTGAGEKAFVSGADISQFEESR--SDAEAVAAYEQAVEAAQA 100 (269)
T ss_pred EEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEEeCCCCceecCcCHHHHhhcc--cchHHHHHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999998 7999999999875321 112223344455567788
Q ss_pred HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410 80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA 158 (312)
Q Consensus 80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~ 158 (312)
.+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +.++++||++++|+
T Consensus 101 ~i~~~~kPvIaav~G~a~GgG~~LalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~ 180 (269)
T PRK06127 101 ALADYAKPTIACIRGYCIGGGMGIALACDIRIAAEDSRFGIPAARLGLGYGYDGVKNLVDLVGPSAAKDLFYTARRFDAA 180 (269)
T ss_pred HHHhCCCCEEEEECCEEecHHHHHHHhCCEEEeeCCCEeeCchhhhCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410 159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA 238 (312)
Q Consensus 159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 238 (312)
||+++||||+|||++++.+.+.++
T Consensus 181 eA~~~Glv~~vv~~~~l~~~a~~~-------------------------------------------------------- 204 (269)
T PRK06127 181 EALRIGLVHRVTAADDLETALADY-------------------------------------------------------- 204 (269)
T ss_pred HHHHcCCCCEeeCHHHHHHHHHHH--------------------------------------------------------
Confidence 999999999999988876544433
Q ss_pred CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
+++++..||.+++.+|++++.....++++.++.|...+..++. ++|++||+.+|+++|.
T Consensus 205 -----------a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~e~~~af~ekr~ 263 (269)
T PRK06127 205 -----------AATIAGNAPLTLRAAKRAIAELLKDEPERDMAACQALVAACFD---SEDYREGRAAFMEKRK 263 (269)
T ss_pred -----------HHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhc---ChHHHHHHHHHhcCCC
Confidence 7899999999999999999988888999999999999988887 9999999999999985
No 29
>PRK09245 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.7e-54 Score=384.42 Aligned_cols=241 Identities=21% Similarity=0.327 Sum_probs=213.4
Q ss_pred CEEecCCCCCCCCCH-HHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhcc--CChHH-HHHHHHHHHH
Q 021410 1 MAILNRPSALNALNT-NMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQ--GKLEE-CKDFFRTLYS 76 (312)
Q Consensus 1 ~itln~p~~~Nal~~-~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~--~~~~~-~~~~~~~~~~ 76 (312)
+||||||++.|++|. +|+.+|.+++++++.|+++|+|||+|.|++||+|.|++++...... ..... ...+...+..
T Consensus 15 ~itlnrp~~~Nal~~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (266)
T PRK09245 15 TLTMNRPETRNALSDNDAVDALVAACAAINADRSVRAVILTGAGTAFSSGGNVKDMRARVGAFGGSPADIRQGYRHGIQR 94 (266)
T ss_pred EEEECCcccccCCChHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcccCcCHHHHhhccccccccchhHHHHHHHHHHH
Confidence 589999999999995 9999999999999999999999999999999999999987532110 01111 1223333456
Q ss_pred HHHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCC
Q 021410 77 FIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKL 155 (312)
Q Consensus 77 ~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i 155 (312)
++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++|.. +++|+++|+++
T Consensus 95 ~~~~l~~~~kpvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~~~a~~l~l~g~~~ 174 (266)
T PRK09245 95 IPLALYNLEVPVIAAVNGPAIGAGCDLACMCDIRIASETARFAESFVKLGLIPGDGGAWLLPRIIGMARAAEMAFTGDAI 174 (266)
T ss_pred HHHHHHcCCCCEEEEECCEeecHHHHHHHhCCEEEecCCCEEcccccccCcCCCcchhhhHHHHhhHHHHHHHHHcCCCc
Confidence 77888999999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred CHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHH
Q 021410 156 NGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLE 235 (312)
Q Consensus 156 ~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 235 (312)
+|+||+++||||+|+|++++.+.+.+
T Consensus 175 ~a~eA~~~Glv~~vv~~~~l~~~a~~------------------------------------------------------ 200 (266)
T PRK09245 175 DAATALEWGLVSRVVPADQLLPAARA------------------------------------------------------ 200 (266)
T ss_pred CHHHHHHcCCcceecCHHHHHHHHHH------------------------------------------------------
Confidence 99999999999999998887654443
Q ss_pred cccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 236 SEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 236 ~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
.+++|++.||.+++.+|++++.....++++.++.|...+..++. ++|++||+++|+++|+
T Consensus 201 -------------~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~eg~~af~~kr~ 260 (266)
T PRK09245 201 -------------LAERIAANPPHALRLTKRLLREGQHASLDTLLELSAAYQALAHH---TADHREAVDAFLEKRP 260 (266)
T ss_pred -------------HHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---CHhHHHHHHHHHcCCC
Confidence 37999999999999999999988888899999999998888887 9999999999999985
No 30
>PRK07658 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.5e-54 Score=381.95 Aligned_cols=237 Identities=23% Similarity=0.319 Sum_probs=214.1
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||++ |++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|.|++++.... .......+......++..
T Consensus 14 ~itl~rp~~-Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~---~~~~~~~~~~~~~~~~~~ 89 (257)
T PRK07658 14 VITLNHPPA-NALSSQVLHELSELLDQVEKDDNVRVVVIHGEGRFFSAGADIKEFTSVT---EAEQATELAQLGQVTFER 89 (257)
T ss_pred EEEECCCCC-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceEeCcCHHHHhccC---chhhHHHHHHHHHHHHHH
Confidence 589999986 9999999999999999999999999999999999999999999875321 112223344555677888
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE 159 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e 159 (312)
+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +.+|+++|++++|+|
T Consensus 90 l~~~~kpvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~e 169 (257)
T PRK07658 90 VEKFSKPVIAAIHGAALGGGLELAMSCHIRFATESAKLGLPELNLGLIPGFAGTQRLPRYVGKAKALEMMLTSEPITGAE 169 (257)
T ss_pred HHhCCCCEEEEEcCeeeeHHHHHHHhCCEEEecCCCcccCcccccCCCCCCcHHHHHHHHhCHHHHHHHHHcCCCcCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999998 999999999999999
Q ss_pred HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410 160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS 239 (312)
Q Consensus 160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 239 (312)
|+++||||+++|++++.+.+.
T Consensus 170 A~~~Glv~~vv~~~~l~~~a~----------------------------------------------------------- 190 (257)
T PRK07658 170 ALKWGLVNGVFPEETLLDDAK----------------------------------------------------------- 190 (257)
T ss_pred HHHcCCcCeecChhHHHHHHH-----------------------------------------------------------
Confidence 999999999999887764433
Q ss_pred CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
+.+++|++.||.+++.+|++++.....++++.++.|...+..++. ++|++||+.+|+++|+
T Consensus 191 --------~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~egi~af~~kr~ 251 (257)
T PRK07658 191 --------KLAKKIAGKSPATTRAVLELLQTTKSSSYYEGVKREAKIFGEVFT---SEDAKEGVQAFLEKRK 251 (257)
T ss_pred --------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHcCCC
Confidence 347889999999999999999988888999999999999999887 9999999999999885
No 31
>PRK07511 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=5e-54 Score=381.48 Aligned_cols=240 Identities=22% Similarity=0.277 Sum_probs=216.8
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||++.|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|.|++++.... .........+...+++++..
T Consensus 15 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g~~F~~G~Dl~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 93 (260)
T PRK07511 15 VLTLSNPGARNALHPDMYAAGIEALNTAERDPSIRAVVLTGAGGFFCAGGNLNRLLENR-AKPPSVQAASIDGLHDWIRA 93 (260)
T ss_pred EEEECCcccccCCCHHHHHHHHHHHHHhccCCCeEEEEEECCCCCcccCcCHHHHhhcc-cccchhHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999875421 11122333455666788889
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE 159 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e 159 (312)
+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++|++||++++|+|
T Consensus 94 l~~~~kpvIAav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~ltg~~~~a~e 173 (260)
T PRK07511 94 IRAFPKPVIAAVEGAAAGAGFSLALACDLLVAARDAKFVMAYVKVGLTPDGGGSWFLARALPRQLATELLLEGKPISAER 173 (260)
T ss_pred HHcCCCCEEEEECCeeehHHHHHHHhCCEEEeeCCCEEeccccccCcCCCchHHHHHHHHhCHHHHHHHHHhCCCCCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410 160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS 239 (312)
Q Consensus 160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 239 (312)
|+++||||+|+|++++.+.+.
T Consensus 174 A~~~Glv~~vv~~~~~~~~a~----------------------------------------------------------- 194 (260)
T PRK07511 174 LHALGVVNRLAEPGQALAEAL----------------------------------------------------------- 194 (260)
T ss_pred HHHcCCccEeeCchHHHHHHH-----------------------------------------------------------
Confidence 999999999999877654333
Q ss_pred CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
+.++++++.||.+++.+|+.++.....++.++++.|...+..++. ++|+++|+++|+++|+
T Consensus 195 --------~~a~~l~~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~~~i~~f~~~r~ 255 (260)
T PRK07511 195 --------ALADQLAAGSPNALARIKSLIADAPEATLAAQLEAERDHFVASLH---HADALEGIAAFLEKRA 255 (260)
T ss_pred --------HHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhc---CchHHHHHHHHhccCC
Confidence 237888999999999999999998888999999999999999988 9999999999999885
No 32
>PRK08252 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=9e-54 Score=378.29 Aligned_cols=233 Identities=22% Similarity=0.264 Sum_probs=206.8
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||++.|++|.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++... . .... ....+..+.
T Consensus 15 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~--~-~~~~---~~~~~~~~~-- 86 (254)
T PRK08252 15 IITINRPEARNAVNAAVAQGLAAALDELDADPDLSVGILTGAGGTFCAGMDLKAFARG--E-RPSI---PGRGFGGLT-- 86 (254)
T ss_pred EEEECCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCceEcCcCHHHHhcc--c-chhh---hHHHHHHHH--
Confidence 5899999999999999999999999999999999999999999999999999987532 1 1111 111112222
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE 159 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e 159 (312)
...+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +++++++|++++|+|
T Consensus 87 ~~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g~~~~a~e 166 (254)
T PRK08252 87 ERPPRKPLIAAVEGYALAGGFELALACDLIVAARDAKFGLPEVKRGLVAAGGGLLRLPRRIPYHIAMELALTGDMLTAER 166 (254)
T ss_pred HhcCCCCEEEEECCEEehHHHHHHHhCCEEEEeCCCEEeCchhhcCCCCCchHHHHHHHHcCHHHHHHHHHcCCccCHHH
Confidence 2469999999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410 160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS 239 (312)
Q Consensus 160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 239 (312)
|+++||||+|+|++++.+.+.
T Consensus 167 A~~~Glv~~vv~~~~l~~~a~----------------------------------------------------------- 187 (254)
T PRK08252 167 AHELGLVNRLTEPGQALDAAL----------------------------------------------------------- 187 (254)
T ss_pred HHHcCCcceecCcchHHHHHH-----------------------------------------------------------
Confidence 999999999999888764333
Q ss_pred CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
+.++++++.||.+++.+|++++.....++.++++.|...+..++. ++|++||+.+|+++|+
T Consensus 188 --------~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~~~~eg~~af~~kr~ 248 (254)
T PRK08252 188 --------ELAERIAANGPLAVAASKRIVVESGDWSEDEMFARQRELIAPVFT---SADAKEGATAFAEKRA 248 (254)
T ss_pred --------HHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---CchHHHHHHHHhcCCC
Confidence 348899999999999999999988888899999999999988887 9999999999999875
No 33
>PRK07468 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=9.2e-54 Score=379.90 Aligned_cols=239 Identities=20% Similarity=0.255 Sum_probs=209.5
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||++.|++|.+|+.+|.++++.++.|+++++|||+|.|++||+|.|++++...... +..........+..++..
T Consensus 17 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 95 (262)
T PRK07468 17 TLTLNRPEKHNALSARMIAELTTAARRLAADAAVRVVVLTGAGKSFCAGGDLGWMRAQMTA-DRATRIEEARRLAMMLKA 95 (262)
T ss_pred EEEEcCcccccCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCcccCCcCHHHHHhhccc-chhhHHHHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999987532111 111111223345567888
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE 159 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e 159 (312)
+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++++ ++|.. +++|++||++++|+|
T Consensus 96 l~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~~~-~vG~~~a~~lll~g~~~~a~e 174 (262)
T PRK07468 96 LNDLPKPLIGRIQGQAFGGGVGLISVCDVAIAVSGARFGLTETRLGLIPATISPYVVA-RMGEANARRVFMSARLFDAEE 174 (262)
T ss_pred HHcCCCCEEEEECCEEEhHHHHHHHhCCEEEEeCCCEEeCchhccCCCcccchhhHHh-hccHHHHHHHHHhCCccCHHH
Confidence 9999999999999999999999999999999999999999999999999999988664 48998 999999999999999
Q ss_pred HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410 160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS 239 (312)
Q Consensus 160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 239 (312)
|+++||||+++|++++.+.+.+
T Consensus 175 A~~~Glv~~v~~~~~l~~~~~~---------------------------------------------------------- 196 (262)
T PRK07468 175 AVRLGLLSRVVPAERLDAAVEA---------------------------------------------------------- 196 (262)
T ss_pred HHHcCCcceecCHHHHHHHHHH----------------------------------------------------------
Confidence 9999999999998776644433
Q ss_pred CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
.++++++.||.+++.+|++++......+++.++.|...+..++. ++|++||+++|+++|.
T Consensus 197 ---------~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---s~d~~e~~~af~~kr~ 256 (262)
T PRK07468 197 ---------EVTPYLSCAPGAVAAAKALVRALGAPIDEAVIDATIEALADTWE---TEEAREGIAAFFDKRA 256 (262)
T ss_pred ---------HHHHHHhcCHHHHHHHHHHHHhhhccChHHHHHHHHHHHHHHhc---CHHHHHHHHHHHcCCC
Confidence 37899999999999999999987666789999999999888888 9999999999999985
No 34
>PRK05995 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=9e-54 Score=380.25 Aligned_cols=239 Identities=23% Similarity=0.320 Sum_probs=209.8
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++....... ..........+..++..
T Consensus 16 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 94 (262)
T PRK05995 16 TVTLNRPDVRNAFNETVIAELTAAFRALDADDSVRAVVLAGAGKAFCAGADLNWMKKMAGYS-DDENRADARRLADMLRA 94 (262)
T ss_pred EEEEcCcccccCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCccccCcCHHHHhhhcccC-chhhhhHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999875321111 11111223345677888
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE 159 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e 159 (312)
+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++ +++++|.. +.+|+++|++|+|+|
T Consensus 95 l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~-l~~~vg~~~a~~l~l~g~~~~a~e 173 (262)
T PRK05995 95 IYRCPKPVIARVHGDAYAGGMGLVAACDIAVAADHAVFCLSEVRLGLIPATISPY-VIRAMGERAARRYFLTAERFDAAE 173 (262)
T ss_pred HHcCCCCEEEEECCEEEhhHHHHHHhCCEEEeeCCCEEeCcccccccCccchHHH-HHHHhCHHHHHHHHHcCCccCHHH
Confidence 9999999999999999999999999999999999999999999999999887655 88999999 999999999999999
Q ss_pred HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410 160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS 239 (312)
Q Consensus 160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 239 (312)
|+++||||+|+|++++.+.+.+
T Consensus 174 A~~~Glv~~vv~~~~l~~~a~~---------------------------------------------------------- 195 (262)
T PRK05995 174 ALRLGLVHEVVPAEALDAKVDE---------------------------------------------------------- 195 (262)
T ss_pred HHHcCCCCeecCHHHHHHHHHH----------------------------------------------------------
Confidence 9999999999998877654443
Q ss_pred CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHH-HHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDEC-LVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~-l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
++++|++.||.+++.+|++++.....++.+. ++.|...+..++. ++|++||+++|+++|.
T Consensus 196 ---------~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~e~~~af~~kr~ 256 (262)
T PRK05995 196 ---------LLAALVANSPQAVRAGKRLVRDVAGRPIDAALIADTASRIALIRA---TEEAREGVAAFLEKRK 256 (262)
T ss_pred ---------HHHHHHhCCHHHHHHHHHHHHhhhcCChhhHHHHHHHHHHHHHhc---CHHHHHHHHHHhcCCC
Confidence 3789999999999999999998877888888 8888888888887 9999999999999985
No 35
>PRK06023 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=7.3e-54 Score=378.24 Aligned_cols=233 Identities=21% Similarity=0.262 Sum_probs=207.6
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||++.|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|.|++++..... +. ..+...+.+++..
T Consensus 18 ~itlnrp~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~--~~---~~~~~~~~~~~~~ 92 (251)
T PRK06023 18 VIRFNRPEKKNAITRAMYATMAKALKAADADDAIRAHVFLGTEGCFSAGNDMQDFLAAAM--GG---TSFGSEILDFLIA 92 (251)
T ss_pred EEEecCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCeecCcCHHHHhhccc--cc---hhhHHHHHHHHHH
Confidence 589999999999999999999999999999999999999999999999999998753211 11 1122344567788
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE 159 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e 159 (312)
+.++||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|+++++++++|.. +.++++||+.++|+|
T Consensus 93 l~~~~kPvIAav~G~a~GgG~~la~acD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~~~a~~l~l~g~~~~a~e 172 (251)
T PRK06023 93 LAEAEKPIVSGVDGLAIGIGTTIHLHCDLTFASPRSLFRTPFVDLALVPEAGSSLLAPRLMGHQRAFALLALGEGFSAEA 172 (251)
T ss_pred HHhCCCCEEEEeCCceecHHHHHHHhCCEEEEeCCCEecCcccccCCCCCchHHHHHHHHHhHHHHHHHHHhCCCCCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999998 999999999999999
Q ss_pred HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410 160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS 239 (312)
Q Consensus 160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 239 (312)
|+++||||+|+|++++.+.+.+
T Consensus 173 A~~~Glv~~vv~~~~l~~~a~~---------------------------------------------------------- 194 (251)
T PRK06023 173 AQEAGLIWKIVDEEAVEAETLK---------------------------------------------------------- 194 (251)
T ss_pred HHHcCCcceeeCHHHHHHHHHH----------------------------------------------------------
Confidence 9999999999998877644433
Q ss_pred CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeecc
Q 021410 240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILN 309 (312)
Q Consensus 240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~ 309 (312)
.+++|+..||.+++.+|++++... ..+.+.++.|.+.+..++. ++|++||+++|+++
T Consensus 195 ---------~a~~l~~~~~~a~~~~K~~l~~~~-~~l~~~~~~e~~~~~~~~~---~~~~~e~~~af~e~ 251 (251)
T PRK06023 195 ---------AAEELAAKPPQALQIARDLMRGPR-EDILARIDEEAKHFAARLK---SAEARAAFEAFMRR 251 (251)
T ss_pred ---------HHHHHHhCCHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHhC---CHHHHHHHHHHhcC
Confidence 389999999999999999998764 4688999999888888887 99999999999864
No 36
>PRK05674 gamma-carboxygeranoyl-CoA hydratase; Validated
Probab=100.00 E-value=1.1e-53 Score=379.57 Aligned_cols=239 Identities=22% Similarity=0.248 Sum_probs=206.2
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.... ..+..........+++++..
T Consensus 18 ~itlnrp~~~Nal~~~~~~el~~al~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 96 (265)
T PRK05674 18 TLWLSRADKNNAFNAQMIRELILALDQVQSDASLRFLLLRGRGRHFSAGADLAWMQQSA-DLDYNTNLDDARELAELMYN 96 (265)
T ss_pred EEEecCcccccCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCcccCcCHHHHhhcc-cccchhhhHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999875321 10111111122334567888
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE 159 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e 159 (312)
+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++ +++++|.. ++++++||+.|+|+|
T Consensus 97 l~~~~kPvIaaV~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gi~p~~~~~~-l~~~vG~~~a~~l~ltg~~~~a~e 175 (265)
T PRK05674 97 LYRLKIPTLAVVQGAAFGGALGLISCCDMAIGADDAQFCLSEVRIGLAPAVISPF-VVKAIGERAARRYALTAERFDGRR 175 (265)
T ss_pred HHcCCCCEEEEEcCEEEechhhHhhhcCEEEEeCCCEEeCcccccCCCcchhHHH-HHHHhCHHHHHHHHHhCcccCHHH
Confidence 9999999999999999999999999999999999999999999999999887654 88999999 999999999999999
Q ss_pred HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410 160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS 239 (312)
Q Consensus 160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 239 (312)
|+++||||+|+|++++.+.+.+
T Consensus 176 A~~~Glv~~vv~~~~l~~~a~~---------------------------------------------------------- 197 (265)
T PRK05674 176 ARELGLLAESYPAAELEAQVEA---------------------------------------------------------- 197 (265)
T ss_pred HHHCCCcceecCHHHHHHHHHH----------------------------------------------------------
Confidence 9999999999998777654443
Q ss_pred CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHH-HHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVRE-YRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e-~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
.+++|+..||.+++.+|++++.....++.++++.+ ...+..++. ++|++||+++|+++|+
T Consensus 198 ---------~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~~~~~~~~~~~---s~d~~e~~~af~~kr~ 258 (265)
T PRK05674 198 ---------WIANLLLNSPQALRASKDLLREVGDGELSPALRRYCENAIARIRV---SAEGQEGLRAFLEKRT 258 (265)
T ss_pred ---------HHHHHHhcCHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhc---CHHHHHHHHHHHccCC
Confidence 37899999999999999999998888888888754 455666666 9999999999999885
No 37
>PRK05981 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.5e-53 Score=379.65 Aligned_cols=241 Identities=20% Similarity=0.278 Sum_probs=213.7
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCC-ceEEEEEeCCCceeccCCchhHHHhhccC--ChHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPN-IGFVSMKGSGRAFCAGGDIVSLYHFMNQG--KLEECKDFFRTLYSF 77 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~-v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~--~~~~~~~~~~~~~~~ 77 (312)
+||||||+++|++|.+|+.+|.++++.++.|++ +|+|||||.|++||+|+|++++....... .......+...++.+
T Consensus 16 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~~v~vvvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (266)
T PRK05981 16 ILTLDHPEVMNAVSIDMLGGLAEALDAIEDGKAEVRCLVLTGAGRGFCTGANLQGRGSGGRESDSGGDAGAALETAYHPF 95 (266)
T ss_pred EEEecCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcccccCHHhhhcccccccccchhHHHHHHHHHHH
Confidence 589999999999999999999999999998864 99999999999999999999875321110 001122334445678
Q ss_pred HHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCC
Q 021410 78 IYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLN 156 (312)
Q Consensus 78 ~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~ 156 (312)
+..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++|.. +++|++||++++
T Consensus 96 ~~~l~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~~e~~lG~~p~~g~~~~l~~~vg~~~a~~l~l~g~~~~ 175 (266)
T PRK05981 96 LRRLRNLPCPIVTAVNGPAAGVGMSFALMGDLILCARSAYFLQAFRRIGLVPDGGSTWLLPRLVGKARAMELSLLGEKLP 175 (266)
T ss_pred HHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEecCCCEEechHhhcCCCCCccHHHHHHHHhHHHHHHHHHHhCCCcC
Confidence 8889999999999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHc
Q 021410 157 GAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLES 236 (312)
Q Consensus 157 a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 236 (312)
|+||+++||||+++|++++.+.+.+
T Consensus 176 a~eA~~~Glv~~vv~~~~~~~~a~~------------------------------------------------------- 200 (266)
T PRK05981 176 AETALQWGLVNRVVDDAELMAEAMK------------------------------------------------------- 200 (266)
T ss_pred HHHHHHcCCceEeeCHhHHHHHHHH-------------------------------------------------------
Confidence 9999999999999998887644332
Q ss_pred ccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 237 EASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 237 ~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
.+++++..||.+++.+|++++.....++.+.++.|...+..++. ++|++||+.+|+++|+
T Consensus 201 ------------~a~~l~~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~---s~d~~e~~~af~~kr~ 260 (266)
T PRK05981 201 ------------LAHELANGPTVALGLIRKLYWDSPENDFEEQLNLEREAQRIAGK---TEDFKEGVGAFLQKRP 260 (266)
T ss_pred ------------HHHHHHcCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHhc---ChhHHHHHHHHhcCCC
Confidence 37889999999999999999988888999999999999988887 9999999999999986
No 38
>PRK06494 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.2e-53 Score=376.89 Aligned_cols=234 Identities=24% Similarity=0.309 Sum_probs=205.2
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY 79 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (312)
+||||||++.|++|.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++.... ..... ...+..+ .
T Consensus 16 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~~--~~~~~----~~~~~~~-~ 88 (259)
T PRK06494 16 IVTLNRPEVMNALHLDAHFELEEVFDDFAADPEQWVAIVTGAGDKAFSAGNDLKEQAAGG--KRGWP----ESGFGGL-T 88 (259)
T ss_pred EEEEcCccccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEEcCCCCceeccccHHhHhhcC--cchhh----hHHHHHH-H
Confidence 5899999999999999999999999999999999999999998 7999999999875321 11111 1112222 3
Q ss_pred HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410 80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA 158 (312)
Q Consensus 80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~ 158 (312)
.+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +.++++||+.++|+
T Consensus 89 ~~~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~lll~g~~~~a~ 168 (259)
T PRK06494 89 SRFDLDKPIIAAVNGVAMGGGFELALACDLIVAAENATFALPEPRVGLAALAGGLHRLPRQIGLKRAMGMILTGRRVTAR 168 (259)
T ss_pred HHhcCCCCEEEEECCEEecHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCchHHHHHHHHcCHHHHHHHHHcCCcCCHH
Confidence 34589999999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410 159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA 238 (312)
Q Consensus 159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 238 (312)
||+++||||+++|++++.+.+.+
T Consensus 169 eA~~~GLv~~vv~~~~l~~~a~~--------------------------------------------------------- 191 (259)
T PRK06494 169 EGLELGFVNEVVPAGELLAAAER--------------------------------------------------------- 191 (259)
T ss_pred HHHHcCCCcEecCHhHHHHHHHH---------------------------------------------------------
Confidence 99999999999998877654433
Q ss_pred CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHH--HHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVRE--YRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e--~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
.+++|++.||.+++.+|++++.....+++++++.| ...+..++. ++|++||+++|+++|.
T Consensus 192 ----------~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~---~~d~~eg~~af~~kr~ 253 (259)
T PRK06494 192 ----------WADDILACSPLSIRASKQAVYRGLEVSLEEAITAQRDYPAVEARRA---SQDYIEGPKAFAEKRP 253 (259)
T ss_pred ----------HHHHHHhcCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhc---CccHHHHHHHHHccCC
Confidence 37899999999999999999988888999999999 456667776 9999999999999875
No 39
>PRK05870 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.4e-53 Score=376.10 Aligned_cols=233 Identities=22% Similarity=0.314 Sum_probs=208.6
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++..... .. .......++..+..
T Consensus 15 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~-~~---~~~~~~~~~~~~~~ 90 (249)
T PRK05870 15 LITVNDPDRRNAVTAEMSAQLRAAVAAAEADPDVHALVVTGAGKAFCAGADLTALGAAPG-RP---AEDGLRRIYDGFLA 90 (249)
T ss_pred EEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCeecCcChHHHhcccc-cc---hHHHHHHHHHHHHH
Confidence 589999999999999999999999999999999999999999999999999998764211 11 12233445566778
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE 159 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e 159 (312)
+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++++++++|.. ++++++||+.++|+|
T Consensus 91 l~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~~a~~l~ltg~~~~a~e 170 (249)
T PRK05870 91 VASCPLPTIAAVNGAAVGAGLNLALAADVRIAGPKALFDARFQKLGLHPGGGATWMLQRAVGPQVARAALLFGMRFDAEA 170 (249)
T ss_pred HHhCCCCEEEEECCEeEchhHHHHHhCCEEEEcCCCEEeCcccccCcCCCCcceeeHHhhhCHHHHHHHHHhCCccCHHH
Confidence 8999999999999999999999999999999999999999999999999999999999999998 999999999999999
Q ss_pred HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410 160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS 239 (312)
Q Consensus 160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 239 (312)
|+++||||+++ +++.+.+.
T Consensus 171 A~~~Glv~~vv--~~l~~~a~----------------------------------------------------------- 189 (249)
T PRK05870 171 AVRHGLALMVA--DDPVAAAL----------------------------------------------------------- 189 (249)
T ss_pred HHHcCCHHHHH--hhHHHHHH-----------------------------------------------------------
Confidence 99999999999 45554333
Q ss_pred CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhc-CCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeecc
Q 021410 240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRF-QTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILN 309 (312)
Q Consensus 240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~-~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~ 309 (312)
+.++++++.||.+++.+|++++.... .+++++++.|...+...+. ++|++||+++|+++
T Consensus 190 --------~~a~~la~~~~~a~~~~K~~~~~~~~~~~l~~~~~~e~~~~~~~~~---~~d~~eg~~af~~~ 249 (249)
T PRK05870 190 --------ELAAGPAAAPRELVLATKASMRATASLAQHAAAVEFELGPQAASVQ---SPEFAARLAAAQRR 249 (249)
T ss_pred --------HHHHHHHhCCHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHhc---ChhHHHHHHHHhcC
Confidence 34899999999999999999998877 8899999999999988887 99999999999863
No 40
>PRK07659 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.8e-53 Score=377.57 Aligned_cols=236 Identities=22% Similarity=0.278 Sum_probs=213.5
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||++.|++|.+|+.+|.++++.+ .|+++|+|||+|.|++||+|+|++++.... +......+...+++++..
T Consensus 18 ~itlnrp~~~Nal~~~~~~~l~~~l~~~-~d~~vrvvvl~g~g~~F~aG~Dl~~~~~~~---~~~~~~~~~~~~~~~~~~ 93 (260)
T PRK07659 18 TIMLNRPEALNALDEPMLKELLQALKEV-AESSAHIVVLRGNGRGFSAGGDIKMMLSSN---DESKFDGVMNTISEIVVT 93 (260)
T ss_pred EEEeCCcccccCCCHHHHHHHHHHHHHh-cCCCeeEEEEECCCCCcccccCHHHHhhcc---CchhHHHHHHHHHHHHHH
Confidence 5899999999999999999999999999 588999999999999999999999875321 122334455666778888
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE 159 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e 159 (312)
+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +.+|++||+.++|+|
T Consensus 94 l~~~~~pvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~~~vg~~~a~~l~ltg~~~~a~e 173 (260)
T PRK07659 94 LYTMPKLTISAIHGPAAGLGLSIALTADYVIADISAKLAMNFIGIGLIPDGGGHFFLQKRVGENKAKQIIWEGKKLSATE 173 (260)
T ss_pred HHhCCCCEEEEecCceecHHHHHHHhCCEEEEcCCCEEcCchhhcCCCCCCchhhhHHHhcCHHHHHHHHHhCCccCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410 160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS 239 (312)
Q Consensus 160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 239 (312)
|+++||||+++ ++++.+.+.
T Consensus 174 A~~~Glv~~vv-~~~~~~~a~----------------------------------------------------------- 193 (260)
T PRK07659 174 ALDLGLIDEVI-GGDFQTAAK----------------------------------------------------------- 193 (260)
T ss_pred HHHcCChHHHh-hhHHHHHHH-----------------------------------------------------------
Confidence 99999999999 666654333
Q ss_pred CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
+.+++|++.||.+++.+|++++.....++++.++.|.+.+..++. ++|++||+.+|+++|+
T Consensus 194 --------~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~~~~egi~af~~kr~ 254 (260)
T PRK07659 194 --------QKISEWLQKPLKAMIETKQIYCELNRSQLEQVLQLEKRAQYAMRQ---TADHKEGIRAFLEKRL 254 (260)
T ss_pred --------HHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhc---CHhHHHHHHHHhcCCC
Confidence 337899999999999999999988888999999999999988888 9999999999999985
No 41
>PRK07938 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.9e-53 Score=372.84 Aligned_cols=234 Identities=21% Similarity=0.214 Sum_probs=207.1
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||++ |++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++... ........+......++..
T Consensus 14 ~itlnrp~~-Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~---~~~~~~~~~~~~~~~~~~~ 89 (249)
T PRK07938 14 EVTVDYPPV-NALPSAGWFALADAITAAGADPDTRVVVLRAEGRGFNAGVDIKELQAT---PGFTALIDANRGCFAAFRA 89 (249)
T ss_pred EEEECCCCc-ccCCHHHHHHHHHHHHHhhcCCCeEEEEEECCCCceecCcCHHHHhhc---cchhHHHHHHHHHHHHHHH
Confidence 589999985 999999999999999999999999999999999999999999986531 1112222233444567778
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE 159 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e 159 (312)
+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++ |++++|++++|.. ++++++||+.|+|+|
T Consensus 90 i~~~~kPvIAav~G~a~GgG~~Lal~cD~ria~~~a~f~~pe~~~G~~---g~~~~l~~~vg~~~a~~l~ltg~~~~a~e 166 (249)
T PRK07938 90 VYECAVPVIAAVHGFCLGGGIGLVGNADVIVASDDATFGLPEVDRGAL---GAATHLQRLVPQHLMRALFFTAATITAAE 166 (249)
T ss_pred HHhCCCCEEEEEcCEEeehHHHHHHhCCEEEEeCCCEeeCccceecCc---hhHHHHHHhcCHHHHHHHHHhCCcCCHHH
Confidence 999999999999999999999999999999999999999999999985 4567899999999 999999999999999
Q ss_pred HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410 160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS 239 (312)
Q Consensus 160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 239 (312)
|+++||||++||++++.+.+.+
T Consensus 167 A~~~Glv~~vv~~~~l~~~a~~---------------------------------------------------------- 188 (249)
T PRK07938 167 LHHFGSVEEVVPRDQLDEAALE---------------------------------------------------------- 188 (249)
T ss_pred HHHCCCccEEeCHHHHHHHHHH----------------------------------------------------------
Confidence 9999999999998877654443
Q ss_pred CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
.+++|+..||.+++.+|++++.....++++.++.|...+..++. ++|++||+++|++||+
T Consensus 189 ---------~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~d~~eg~~af~ekr~ 248 (249)
T PRK07938 189 ---------VARKIAAKDTRVIRAAKEALNGIDPQDVERSYRWEQGFTFELNL---AGVSDEHRDAFVEKRK 248 (249)
T ss_pred ---------HHHHHHhCCHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhc---CccHHHHHHHHHhcCC
Confidence 38899999999999999999988788899999999998888887 9999999999999986
No 42
>TIGR01929 menB naphthoate synthase (dihydroxynaphthoic acid synthetase). This model represents an enzyme, naphthoate synthase (dihydroxynaphthoic acid synthetase), which is involved in the fifth step of the menaquinone biosynthesis pathway. Together with o-succinylbenzoate-CoA ligase (menE: TIGR01923), this enzyme takes 2-succinylbenzoate and converts it into 1,4-di-hydroxy-2-naphthoate. Included above the trusted cutoff are two enzymes from Arabadopsis thaliana and one from Staphylococcus aureus which are identified as putative enoyl-CoA hydratase/isomerases. These enzymes group with the naphthoate synthases when building a tree and when doing BLAST searches.
Probab=100.00 E-value=2.9e-53 Score=375.90 Aligned_cols=237 Identities=18% Similarity=0.219 Sum_probs=204.1
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY 79 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (312)
+||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++.... ........ ......++.
T Consensus 15 ~itlnrp~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~-~~~~~~~~--~~~~~~~~~ 91 (259)
T TIGR01929 15 KITINRPQVRNAFRPLTVKEIIQALDDAREDPDIGVVILTGAGDKAFCSGGDQKVRGDYG-YIDDSGVH--RLNVLDVQR 91 (259)
T ss_pred EEEecCCccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEEeCCCCceEeCcChHhHhhcc-ccchhhHH--HHHHHHHHH
Confidence 5899999999999999999999999999999999999999999 7999999999764211 00111111 112345677
Q ss_pred HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410 80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA 158 (312)
Q Consensus 80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~ 158 (312)
.+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +++|+++|++++|+
T Consensus 92 ~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~~p~~~~~~~l~~~vG~~~a~~l~l~g~~~~a~ 171 (259)
T TIGR01929 92 QIRTCPKPVIAMVNGYAIGGGHVLHVVCDLTIAAENARFGQTGPKVGSFDGGYGSSYLARIVGQKKAREIWFLCRQYDAE 171 (259)
T ss_pred HHHhCCCCEEEEEcCEEehHHHHHHHhCCEEEecCCCEecCcccccccCCCccHHHHHHHHhHHHHHHHHHHhCCccCHH
Confidence 88899999999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410 159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA 238 (312)
Q Consensus 159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 238 (312)
||+++||||+|+|++++.+.+.+
T Consensus 172 eA~~~Glv~~vv~~~~l~~~a~~--------------------------------------------------------- 194 (259)
T TIGR01929 172 QALDMGLVNTVVPLADLEKETVR--------------------------------------------------------- 194 (259)
T ss_pred HHHHcCCcccccCHHHHHHHHHH---------------------------------------------------------
Confidence 99999999999998777644433
Q ss_pred CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
.+++|+..||.+++.+|++++..... .....+.|.+.+...+. ++|++||+++|+++|+
T Consensus 195 ----------~a~~la~~~~~a~~~~K~~l~~~~~~-~~~~~~~e~~~~~~~~~---~~d~~egi~af~~kr~ 253 (259)
T TIGR01929 195 ----------WCREILQKSPMAIRMLKAALNADCDG-QAGLQELAGNATMLFYM---TEEGQEGRNAFLEKRQ 253 (259)
T ss_pred ----------HHHHHHhCCHHHHHHHHHHHHhhhcc-chHHHHHHHHHHHHHhc---CccHHHHHHHHhccCC
Confidence 38999999999999999999876443 45556667777777777 9999999999999985
No 43
>PRK05864 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.4e-53 Score=378.83 Aligned_cols=241 Identities=20% Similarity=0.264 Sum_probs=206.9
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccC---ChHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG---KLEECKDFFRTLYSF 77 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~---~~~~~~~~~~~~~~~ 77 (312)
+||||||+++|++|.+|+.+|.+++++++.|+++|+|||+|.|++||+|+|++++....... +......+...+..+
T Consensus 22 ~itlnrp~~~Nal~~~~~~~L~~~l~~~~~d~~vrvvVl~g~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (276)
T PRK05864 22 LITLNRPERMNSMAFDVMVPLKEALAEVSYDNSVRVVVLTGAGRGFSSGADHKSAGVVPHVEGLTRPTYALRSMELLDDV 101 (276)
T ss_pred EEEecCCccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCeecCcchhhhhcccccccccchhHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999864211000 111112233445567
Q ss_pred HHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccC-CCchHHHhhhcChHH-HHHHHhcCCCC
Q 021410 78 IYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHP-DAGASFYLSHLPGHL-GEFLALTGAKL 155 (312)
Q Consensus 78 ~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p-~~g~~~~l~r~~g~~-a~~l~ltg~~i 155 (312)
+..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++| ++|++++|++++|.. +.++++||+++
T Consensus 102 ~~~l~~~~kPvIaav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~l~~~vG~~~A~~l~l~g~~~ 181 (276)
T PRK05864 102 ILALRRLHQPVIAAVNGPAIGGGLCLALAADIRVASSSAYFRAAGINNGLTASELGLSYLLPRAIGSSRAFEIMLTGRDV 181 (276)
T ss_pred HHHHHhCCCCEEEEECCEeehhHHHHHHhCCEEEeeCCCEecCcccccCCCCCCcchheehHhhhCHHHHHHHHHcCCcc
Confidence 7788899999999999999999999999999999999999999999999997 788999999999999 99999999999
Q ss_pred CHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHH
Q 021410 156 NGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLE 235 (312)
Q Consensus 156 ~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 235 (312)
+|+||+++||||+++|++++.+.+.+
T Consensus 182 ~a~eA~~~Glv~~vv~~~~l~~~a~~------------------------------------------------------ 207 (276)
T PRK05864 182 DAEEAERIGLVSRQVPDEQLLDTCYA------------------------------------------------------ 207 (276)
T ss_pred CHHHHHHcCCcceeeCHHHHHHHHHH------------------------------------------------------
Confidence 99999999999999998877654443
Q ss_pred cccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcC-CHHHHHHHHHHHHH-HhhhcCCCCChhhhhheeeccCC
Q 021410 236 SEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQ-TFDECLVREYRMSL-QGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 236 ~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~-~l~~~l~~e~~~~~-~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
.+++|+..||.+++.+|++++..... ++++.++.|..... ..+. ++|++||+++|+++|+
T Consensus 208 -------------~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~~~---~~d~~e~~~af~~kr~ 269 (276)
T PRK05864 208 -------------IAARMAGFSRPGIELTKRTLWSGLDAASLEAHMQAEGLGQLFVRLL---TANFEEAVAARAEKRP 269 (276)
T ss_pred -------------HHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHhcc---ChhHHHHHHHHhccCC
Confidence 37999999999999999999887664 78888888865432 3455 9999999999999985
No 44
>PRK06210 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.6e-53 Score=379.28 Aligned_cols=241 Identities=26% Similarity=0.333 Sum_probs=210.8
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCCh--HHHHHH----HHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKL--EECKDF----FRTL 74 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~--~~~~~~----~~~~ 74 (312)
+||||||++.|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++......... .....+ ...+
T Consensus 18 ~itlnrp~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (272)
T PRK06210 18 VITLNRPDRLNAWTPVMEAEVYAAMDRAEADPAVRVIVLTGAGRGFCAGADMGELQTIDPSDGRRDTDVRPFVGNRRPDY 97 (272)
T ss_pred EEEeCCcccccCCCHHHHHHHHHHHHHhccCCCeeEEEEECCCCCcccccCHHHHhccCcccccccccchhhhhhhhhhH
Confidence 5899999999999999999999999999999999999999999999999999987542110000 000111 1123
Q ss_pred HHHHHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCC
Q 021410 75 YSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGA 153 (312)
Q Consensus 75 ~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~ 153 (312)
++++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++++++++|.. +++|++||+
T Consensus 98 ~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ig~~~a~~l~ltg~ 177 (272)
T PRK06210 98 QTRYHFLTALRKPVIAAINGACAGIGLTHALMCDVRFAADGAKFTTAFARRGLIAEHGISWILPRLVGHANALDLLLSAR 177 (272)
T ss_pred HHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEeCCCEEechHHhcCCCCCCchhhhhHhhhCHHHHHHHHHcCC
Confidence 4556788899999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred CCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHH
Q 021410 154 KLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDS 233 (312)
Q Consensus 154 ~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (312)
.++|+||+++||||+++|++++.+.+.+
T Consensus 178 ~~~a~eA~~~Glv~~vv~~~~l~~~a~~---------------------------------------------------- 205 (272)
T PRK06210 178 TFYAEEALRLGLVNRVVPPDELMERTLA---------------------------------------------------- 205 (272)
T ss_pred ccCHHHHHHcCCcceecCHHHHHHHHHH----------------------------------------------------
Confidence 9999999999999999998776543332
Q ss_pred HHcccCCCCchHHHHHHHHHHhc-CchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 234 LESEASLINDPWCGSTLRLLKEA-SPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 234 l~~~~~~~~~~~a~~~~~~i~~~-~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
.+++|++. +|.++..+|++++.....+++++++.|...+..++. ++|++||+++|+++|+
T Consensus 206 ---------------~a~~i~~~~~p~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~~~~egi~af~~kr~ 266 (272)
T PRK06210 206 ---------------YAEDLARNVSPASMAVIKRQLYEDAFQTLAEATARANREMHESLQ---RPDFIEGVASFLEKRP 266 (272)
T ss_pred ---------------HHHHHHhcCCHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHhc---CccHHHHHHHHhccCC
Confidence 37888875 999999999999998888999999999999888887 9999999999999985
No 45
>PRK07327 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.3e-53 Score=376.61 Aligned_cols=235 Identities=23% Similarity=0.319 Sum_probs=203.9
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|.|++++.... ........+......++..
T Consensus 24 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~--~~~~~~~~~~~~~~~~~~~ 101 (268)
T PRK07327 24 EIVLNGPGALNAADARMHRELADIWRDVDRDPDVRVVLIRGEGKAFSAGGDLALVEEMA--DDFEVRARVWREARDLVYN 101 (268)
T ss_pred EEEEcCCCccCCCCHHHHHHHHHHHHHhhhCCCceEEEEECCCCCcccccCHHHHhhcc--CcHHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999875421 1222233344555677888
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE 159 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e 159 (312)
+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +.++++||++++|+|
T Consensus 102 l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~e 181 (268)
T PRK07327 102 VINCDKPIVSAIHGPAVGAGLVAALLADISIAAKDARIIDGHTRLGVAAGDHAAIVWPLLCGMAKAKYYLLLCEPVSGEE 181 (268)
T ss_pred HHcCCCCEEEEEcCeeeehhhHHHHhCCEEEecCCCEEeCcccccCCCCCcchhhHHHHHhCHHHHHHHHHcCCccCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410 160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS 239 (312)
Q Consensus 160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 239 (312)
|+++||||+++|++++.+.+.+
T Consensus 182 A~~~Glv~~vv~~~~l~~~a~~---------------------------------------------------------- 203 (268)
T PRK07327 182 AERIGLVSLAVDDDELLPKALE---------------------------------------------------------- 203 (268)
T ss_pred HHHcCCcceecCHHHHHHHHHH----------------------------------------------------------
Confidence 9999999999998887654443
Q ss_pred CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhc---CCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRF---QTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~---~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
.+++|++.||.+++.+|++++.... ..+++.+..|. ..+. ++|++||+.+|+++|+
T Consensus 204 ---------~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~~~----~~~~---~~d~~eg~~af~ekr~ 262 (268)
T PRK07327 204 ---------VAERLAAGSQTAIRWTKYALNNWLRMAGPTFDTSLALEF----MGFS---GPDVREGLASLREKRA 262 (268)
T ss_pred ---------HHHHHHcCCHHHHHHHHHHHHHhhhhhhhhHHHHHHHHH----HHcc---ChhHHHHHHHHHhcCC
Confidence 3899999999999999999986522 24555555443 3455 9999999999999985
No 46
>PLN02888 enoyl-CoA hydratase
Probab=100.00 E-value=4.4e-53 Score=375.58 Aligned_cols=236 Identities=21% Similarity=0.270 Sum_probs=208.8
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.... ..+ . ......++..
T Consensus 22 ~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~-~~~---~---~~~~~~~~~~ 94 (265)
T PLN02888 22 TITINRPKALNALTRPMMVELAAAFKRLDEDDSVKVIILTGSGRAFCSGVDLTAAEEVF-KGD---V---KDVETDPVAQ 94 (265)
T ss_pred EEEEcCCCcccCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCcccCCCCHHHHHhhc-cch---h---hHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999864321 111 1 1112345667
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE 159 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e 159 (312)
+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++++++||+.++|+|
T Consensus 95 i~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~e 174 (265)
T PLN02888 95 MERCRKPIIGAINGFAITAGFEIALACDILVASRGAKFIDTHAKFGIFPSWGLSQKLSRIIGANRAREVSLTAMPLTAET 174 (265)
T ss_pred HHhCCCCEEEEECCeeechHHHHHHhCCEEEecCCCEecCccccccCCCCccHhhHHHHHhCHHHHHHHHHhCCccCHHH
Confidence 8899999999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410 160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS 239 (312)
Q Consensus 160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 239 (312)
|+++||||++||++++.+.+.
T Consensus 175 A~~~Glv~~vv~~~~l~~~a~----------------------------------------------------------- 195 (265)
T PLN02888 175 AERWGLVNHVVEESELLKKAR----------------------------------------------------------- 195 (265)
T ss_pred HHHcCCccEeeChHHHHHHHH-----------------------------------------------------------
Confidence 999999999999877654443
Q ss_pred CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
+++++|++.+|.+++.+|++++.....+++++++.|...+..++. ..++|++||+++|+++|+
T Consensus 196 --------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~-~~~~d~~e~~~af~ekr~ 258 (265)
T PLN02888 196 --------EVAEAIIKNNQGMVLRYKSVINDGLKLDLGHALQLEKERAHDYYN-GMTKEQFQKMQEFIAGRS 258 (265)
T ss_pred --------HHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc-cCCHHHHHHHHHHHhcCC
Confidence 348999999999999999999988888999999999887777651 128999999999999985
No 47
>PRK06688 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.7e-53 Score=375.92 Aligned_cols=236 Identities=27% Similarity=0.372 Sum_probs=215.0
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||++.|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++.... ... ..+...+++++..
T Consensus 17 ~i~lnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~--~~~---~~~~~~~~~~~~~ 91 (259)
T PRK06688 17 TITINRPDKKNALTAAMYQALADALEAAATDPAVRVVVLTGAGRAFSAGGDIKDFPKAP--PKP---PDELAPVNRFLRA 91 (259)
T ss_pred EEEecCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCccCccCHHHHhccC--cch---HHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999876421 111 2345556778888
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE 159 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e 159 (312)
+.++||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|+++++++++|.. +.+++++|++++|+|
T Consensus 92 l~~~~kp~Iaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~~a~~l~l~g~~~~a~e 171 (259)
T PRK06688 92 IAALPKPVVAAVNGPAVGVGVSLALACDLVYASESAKFSLPFAKLGLCPDAGGSALLPRLIGRARAAEMLLLGEPLSAEE 171 (259)
T ss_pred HHcCCCCEEEEECCeeecHHHHHHHhCCEEEecCCCEecCchhhcCCCCCcchhhHHHHHhhHHHHHHHHHhCCccCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410 160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS 239 (312)
Q Consensus 160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 239 (312)
|+++||||+++|++++.+.+.+
T Consensus 172 A~~~Glv~~v~~~~~l~~~a~~---------------------------------------------------------- 193 (259)
T PRK06688 172 ALRIGLVNRVVPAAELDAEADA---------------------------------------------------------- 193 (259)
T ss_pred HHHcCCcceecCHHHHHHHHHH----------------------------------------------------------
Confidence 9999999999998776644333
Q ss_pred CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
.+++|++.||.+++.+|++++.....++++++..|.+.+..++. ++|+++|+++|+++|+
T Consensus 194 ---------~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~~~~~af~~~~~ 253 (259)
T PRK06688 194 ---------QAAKLAAGPASALRYTKRAINAATLTELEEALAREAAGFGRLLR---TPDFREGATAFIEKRK 253 (259)
T ss_pred ---------HHHHHHhCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHcCCC
Confidence 37889999999999999999998888999999999999999988 9999999999999875
No 48
>COG1024 CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]
Probab=100.00 E-value=8.2e-53 Score=373.06 Aligned_cols=236 Identities=30% Similarity=0.415 Sum_probs=210.7
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.. ..+......+....+.++..
T Consensus 17 ~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvltg~g~~FsaG~Dl~~~~~---~~~~~~~~~~~~~~~~~~~~ 93 (257)
T COG1024 17 VITLNRPEKLNALNLEMLDELAEALDEAEADPDVRVVVLTGAGKAFSAGADLKELLS---PEDGNAAENLMQPGQDLLRA 93 (257)
T ss_pred EEEecCcccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCceecccCHHHHhc---ccchhHHHHHHhHHHHHHHH
Confidence 589999999999999999999999999999999999999999999999999999864 11122222566667789999
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE 159 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e 159 (312)
+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++++|++|.. +.+|++||+.++++|
T Consensus 94 l~~~~kPvIAav~G~a~GgG~eLal~~D~ria~~~a~f~~pe~~iGl~Pg~g~~~~l~r~~G~~~a~~l~ltg~~~~a~e 173 (257)
T COG1024 94 LADLPKPVIAAVNGYALGGGLELALACDIRIAAEDAKFGLPEVNLGLLPGDGGTQRLPRLLGRGRAKELLLTGEPISAAE 173 (257)
T ss_pred HHhCCCCEEEEEcceEeechhhhhhcCCeEEecCCcEecCcccccccCCCCcHHHHHHHhcCHHHHHHHHHcCCcCCHHH
Confidence 9999999999999999999999999999999999999999999999999889999999999999 999999999999999
Q ss_pred HHHcCccceecCC-CChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410 160 MMACGLATHYSVS-EKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA 238 (312)
Q Consensus 160 A~~~Glv~~vv~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 238 (312)
|+++|||++++++ +++.+.+.++
T Consensus 174 A~~~Glv~~vv~~~~~l~~~a~~~-------------------------------------------------------- 197 (257)
T COG1024 174 ALELGLVDEVVPDAEELLERALEL-------------------------------------------------------- 197 (257)
T ss_pred HHHcCCcCeeeCCHHHHHHHHHHH--------------------------------------------------------
Confidence 9999999999985 4665444433
Q ss_pred CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
+++++. +|.++..+|+.++......+++.++.|...+...+. ++|++||+++|++ |+
T Consensus 198 -----------a~~~a~-~~~a~~~~k~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~d~~eg~~a~~~-r~ 254 (257)
T COG1024 198 -----------ARRLAA-PPLALAATKRLVRAALEADLAEALEAEALAFARLFS---SEDFREGVRAFLE-RK 254 (257)
T ss_pred -----------HHHHcc-CHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHhc---ChhHHHHHHHHHc-cC
Confidence 566655 999999999999988777799999999999888776 9999999999998 64
No 49
>TIGR03210 badI 2-ketocyclohexanecarboxyl-CoA hydrolase. Members of this protein family are 2-ketocyclohexanecarboxyl-CoA hydrolase, a ring-opening enzyme that acts in catabolism of molecules such as benzoyl-CoA and cyclohexane carboxylate. It converts -ketocyclohexanecarboxyl-CoA to pimelyl-CoA. It is not sensitive to oxygen.
Probab=100.00 E-value=5.9e-53 Score=373.33 Aligned_cols=234 Identities=18% Similarity=0.191 Sum_probs=199.9
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY 79 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (312)
+||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++... .+.. ..+...+..++.
T Consensus 14 ~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~---~~~~--~~~~~~~~~~~~ 88 (256)
T TIGR03210 14 WIMINRPAKMNAFRGQTCDELIHALKDAGYDRQIGVIVLAGAGDKAFCTGGDQSTHDGG---YDGR--GTIGLPMEELHS 88 (256)
T ss_pred EEEEcCCccccCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCceecCcChHHHhcc---ccch--hHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999 799999999987421 1111 112233456778
Q ss_pred HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410 80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA 158 (312)
Q Consensus 80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~ 158 (312)
.+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+++++++|++++|.. ++++++||+.++|+
T Consensus 89 ~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~~~~~~~~~l~~~vG~~~A~~lll~g~~~~a~ 168 (256)
T TIGR03210 89 AIRDVPKPVIARVQGYAIGGGNVLVTICDLTIASEKAQFGQVGPKVGSVDPGYGTALLARVVGEKKAREIWYLCRRYTAQ 168 (256)
T ss_pred HHHhCCCCEEEEECCEEehhhHHHHHhCCEEEEeCCCEEecccccccccCCccHHHHHHHHhCHHHHHHHHHhCCCcCHH
Confidence 89999999999999999999999999999999999999999999999998888899999999999 99999999999999
Q ss_pred HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410 159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA 238 (312)
Q Consensus 159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 238 (312)
||+++||||+++|++++.+.+.+
T Consensus 169 eA~~~Glv~~vv~~~~l~~~a~~--------------------------------------------------------- 191 (256)
T TIGR03210 169 EALAMGLVNAVVPHDQLDAEVQK--------------------------------------------------------- 191 (256)
T ss_pred HHHHcCCceeeeCHHHHHHHHHH---------------------------------------------------------
Confidence 99999999999998877654443
Q ss_pred CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCH-HHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTF-DECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l-~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
.+++|++.||.+++.+|++++....... .+.+ |...+..++. ++|++||+++|+++|+
T Consensus 192 ----------~a~~ia~~~~~a~~~~K~~l~~~~~~~~~~~~~--~~~~~~~~~~---~~d~~e~~~af~~kr~ 250 (256)
T TIGR03210 192 ----------WCDEIVEKSPTAIAIAKRSFNMDTAHQRGIAGM--GMYALKLYYD---TAESREGVKAFQEKRK 250 (256)
T ss_pred ----------HHHHHHhCCHHHHHHHHHHHHHhhcccchHHHH--HHHHHHHHcc---ChhHHHHHHHHhccCC
Confidence 3899999999999999999987643321 1222 3345555666 9999999999999985
No 50
>PRK03580 carnitinyl-CoA dehydratase; Provisional
Probab=100.00 E-value=8.4e-53 Score=373.53 Aligned_cols=235 Identities=22% Similarity=0.310 Sum_probs=206.9
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY 79 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (312)
+||||||+ .|++|.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++.... .. . ..+.......+.
T Consensus 15 ~itlnrp~-~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~~F~aG~Dl~~~~~~~--~~-~--~~~~~~~~~~~~ 88 (261)
T PRK03580 15 EITLDRPK-ANAIDAKTSFAMGEVFLNFRDDPELRVAIITGAGEKFFSAGWDLKAAAEGE--AP-D--ADFGPGGFAGLT 88 (261)
T ss_pred EEEECCcc-ccCCCHHHHHHHHHHHHHHHhCCCcEEEEEEeCCCCceecccCHHHHhccC--cc-h--hhhhhhhhHHHH
Confidence 58999996 5999999999999999999999999999999999 7999999999875321 11 1 112122234567
Q ss_pred HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410 80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA 158 (312)
Q Consensus 80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~ 158 (312)
.+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +.+++++|+.++|+
T Consensus 89 ~l~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~vg~~~a~~l~l~g~~~~a~ 168 (261)
T PRK03580 89 EIFDLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKRLPPAIANEMVMTGRRMDAE 168 (261)
T ss_pred HHHhCCCCEEEEECCeeehHHHHHHHHCCEEEecCCCEEeCcccccCcCCCccHHHHHHHHhCHHHHHHHHHhCCccCHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410 159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA 238 (312)
Q Consensus 159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 238 (312)
||+++||||+++|++++.+.+..+
T Consensus 169 eA~~~Glv~~vv~~~~l~~~a~~~-------------------------------------------------------- 192 (261)
T PRK03580 169 EALRWGIVNRVVPQAELMDRAREL-------------------------------------------------------- 192 (261)
T ss_pred HHHHcCCCcEecCHhHHHHHHHHH--------------------------------------------------------
Confidence 999999999999988876544433
Q ss_pred CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHH----HHHHhhhcCCCCChhhhhheeeccCC
Q 021410 239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYR----MSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~----~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
+++|+..||.+++.+|++++.....+++++++.|.. .+..++. ++|++||+++|+++|+
T Consensus 193 -----------a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~---~~d~~e~~~af~ekr~ 255 (261)
T PRK03580 193 -----------AQQLVNSAPLAIAALKEIYRETSEMPVEEAYRYIRSGVLKHYPSVLH---SEDALEGPRAFAEKRD 255 (261)
T ss_pred -----------HHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHhhhHHHHHHHhc---CccHHHHHHHHhcCCC
Confidence 789999999999999999998888889999998874 5566676 9999999999999985
No 51
>PRK06495 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.2e-52 Score=371.80 Aligned_cols=235 Identities=22% Similarity=0.330 Sum_probs=209.3
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||+ .|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++.... ........+...+++++..
T Consensus 16 ~itlnrp~-~Nal~~~~~~~l~~al~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~--~~~~~~~~~~~~~~~~~~~ 92 (257)
T PRK06495 16 VVTLDNPP-VNALSRELRDELIAVFDEISERPDVRVVVLTGAGKVFCAGADLKGRPDVI--KGPGDLRAHNRRTRECFHA 92 (257)
T ss_pred EEEECCCc-cccCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCcccCcCHHhHhhcc--CCchhHHHHHHHHHHHHHH
Confidence 58999998 59999999999999999999999999999999999999999999875321 1112223344455677888
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE 159 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e 159 (312)
+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++ |+++++++++|.. +.+|+++|+.++|+|
T Consensus 93 l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~---~~~~~l~~~~g~~~a~~lll~g~~~~a~e 169 (257)
T PRK06495 93 IRECAKPVIAAVNGPALGAGLGLVASCDIIVASENAVFGLPEIDVGLA---GGGKHAMRLFGHSLTRRMMLTGYRVPAAE 169 (257)
T ss_pred HHhCCCCEEEEECCeeehhHHHHHHhCCEEEecCCCEeeChhhccCcc---ccHHHHHHHhCHHHHHHHHHcCCeeCHHH
Confidence 999999999999999999999999999999999999999999999996 4567899999999 999999999999999
Q ss_pred HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410 160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS 239 (312)
Q Consensus 160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 239 (312)
|+++||||+++|++++.+.+.+
T Consensus 170 A~~~GLv~~vv~~~~~~~~a~~---------------------------------------------------------- 191 (257)
T PRK06495 170 LYRRGVIEACLPPEELMPEAME---------------------------------------------------------- 191 (257)
T ss_pred HHHcCCcceecCHHHHHHHHHH----------------------------------------------------------
Confidence 9999999999998887654443
Q ss_pred CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
.+++|++.||.+++.+|++++.....+++++++.|.+.+...+. ++|++||+++|+++|+
T Consensus 192 ---------~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---s~d~~egi~af~~kr~ 251 (257)
T PRK06495 192 ---------IAREIASKSPLATRLAKDALNTIENMSLRDGYRYEQDITAKLAK---TEDAKEAQRAFLEKRP 251 (257)
T ss_pred ---------HHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---ChHHHHHHHHHhccCC
Confidence 38999999999999999999988888999999999999988887 9999999999999985
No 52
>PRK08259 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=7.2e-53 Score=372.18 Aligned_cols=234 Identities=24% Similarity=0.229 Sum_probs=204.2
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||+++|++|.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++.... ....... ....+...
T Consensus 15 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvltg~g~~FcaG~Dl~~~~~~~----~~~~~~~--~~~~~~~~ 88 (254)
T PRK08259 15 TVILNRPEVRNAVDGPTAAALADAFRAFDADDAASVAVLWGAGGTFCAGADLKAVGTGR----GNRLHPS--GDGPMGPS 88 (254)
T ss_pred EEEecCCccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCccCCcChHHHhccc----chhhhhh--hcchhhhH
Confidence 58999999999999999999999999999999999999999999999999999875321 1111100 00111122
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE 159 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e 159 (312)
+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +.+++++|+.++|+|
T Consensus 89 ~~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~lll~g~~~~a~e 168 (254)
T PRK08259 89 RMRLSKPVIAAVSGYAVAGGLELALWCDLRVAEEDAVFGVFCRRWGVPLIDGGTVRLPRLIGHSRAMDLILTGRPVDADE 168 (254)
T ss_pred HhcCCCCEEEEECCEEEhHHHHHHHhCCEEEecCCCEecCcccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCccCHHH
Confidence 3479999999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410 160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS 239 (312)
Q Consensus 160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 239 (312)
|+++||||+|+|++++.+.+.+
T Consensus 169 A~~~Glv~~vv~~~~l~~~a~~---------------------------------------------------------- 190 (254)
T PRK08259 169 ALAIGLANRVVPKGQARAAAEE---------------------------------------------------------- 190 (254)
T ss_pred HHHcCCCCEeeChhHHHHHHHH----------------------------------------------------------
Confidence 9999999999998887654443
Q ss_pred CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
.+++|++.||.+++.+|++++.....+++++++.|...+...+ ++|++||+++|+++|.
T Consensus 191 ---------~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~----~~d~~egi~af~~~~~ 249 (254)
T PRK08259 191 ---------LAAELAAFPQTCLRADRLSALEQWGLPEEAALANEFAHGLAVL----AAEALEGAARFAAGAG 249 (254)
T ss_pred ---------HHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH----hhHHHHHHHHHHhhhc
Confidence 3889999999999999999998878889999999988776665 4999999999998874
No 53
>PF00378 ECH: Enoyl-CoA hydratase/isomerase family; InterPro: IPR001753 The crotonase superfamily is comprised of mechanistically diverse proteins that share a conserved trimeric quaternary structure (sometimes a hexamer consisting of a dimer of trimers), the core of which consists of 4 turns of a (beta/beta/alpha)n superhelix. Some enzymes in the superfamily have been shown to display dehalogenase, hydratase, and isomerase activities, while others have been implicated in carbon-carbon bond formation and cleavage as well as the hydrolysis of thioesters []. However, these different enzymes share the need to stabilise an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two structurally conserved peptidic NH groups that provide hydrogen bonds to the carbonyl moieties of the acyl-CoA substrates and form an "oxyanion hole". The CoA thioester derivatives bind in a characteristic hooked shape and a conserved tunnel binds the pantetheine group of CoA, which links the 3'-phosphate ADP binding site to the site of reaction []. Enzymes in the crotonase superfamily include: Enoyl-CoA hydratase (crotonase; 4.2.1.17 from EC), which catalyses the hydratation of 2-trans-enoyl-CoA into 3-hydroxyacyl-CoA []. 3-2trans-enoyl-CoA isomerase (or dodecenoyl-CoA isomerise; 5.3.3.8 from EC), which shifts the 3-double bond of the intermediates of unsaturated fatty acid oxidation to the 2-trans position []. 3-hydroxbutyryl-CoA dehydratase (crotonase; 4.2.1.55 from EC), a bacterial enzyme involved in the butyrate/butanol-producing pathway. 4-Chlorobenzoyl-CoA dehalogenase (3.8.1.6 from EC), a Pseudomonas enzyme which catalyses the conversion of 4-chlorobenzoate-CoA to 4-hydroxybenzoate-CoA []. Dienoyl-CoA isomerise, which catalyses the isomerisation of 3-trans,5-cis-dienoyl-CoA to 2-trans,4-trans-dienoyl-CoA []. Naphthoate synthase (MenB, or DHNA synthetase; 4.1.3.36 from EC), a bacterial enzyme involved in the biosynthesis of menaquinone (vitamin K2) []. Carnitine racemase (gene caiD), which catalyses the reversible conversion of crotonobetaine to L-carnitine in Escherichia coli []. Methylmalonyl CoA decarboxylase (MMCD; 4.1.1.41 from EC), which has a hexameric structure (dimer of trimers) []. Carboxymethylproline synthase (CarB), which is involved in carbapenem biosynthesis []. 6-oxo camphor hydrolase, which catalyses the desymmetrisation of bicyclic beta-diketones to optically active keto acids []. The alpha subunit of fatty oxidation complex, a multi-enzyme complex that catalyses the last three reactions in the fatty acid beta-oxidation cycle []. AUH protein, a bifunctional RNA-binding homologue of enoyl-CoA hydratase []. This entry represents the core domain found in crotonase superfamily members.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2VRE_B 3RSI_A 1HZD_F 2ZQR_E 2ZQQ_D 3R9S_C 1O8U_E 1SZO_C 3MOY_A 2UZF_A ....
Probab=100.00 E-value=2.8e-53 Score=373.85 Aligned_cols=235 Identities=30% Similarity=0.476 Sum_probs=220.1
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||++.|++|.+|+.+|.++++.++.|+++|+||++|.|++||+|.|++++... +......+...++.++..
T Consensus 10 ~i~ln~p~~~N~l~~~~~~~l~~~l~~~~~d~~v~vvv~~~~~~~F~~G~Dl~~~~~~----~~~~~~~~~~~~~~l~~~ 85 (245)
T PF00378_consen 10 TITLNRPEKRNALNPEMLDELEEALDEAEADPDVKVVVISGGGKAFCAGADLKEFLNS----DEEEAREFFRRFQELLSR 85 (245)
T ss_dssp EEEEECGGGTTEBSHHHHHHHHHHHHHHHHSTTESEEEEEESTSESBESB-HHHHHHH----HHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCCHHHHHHHHHHHHHHHhcCCccEEEEeecccccccccchhhhhcc----ccccccccchhhcccccc
Confidence 5899999999999999999999999999999999999999999999999999998765 345566788888999999
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE 159 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e 159 (312)
+..+||||||+|||+|+|||++++++||+|||+++++|++||+++|++|++|++++|+|++|.. +.++++||++++|+|
T Consensus 86 l~~~~kp~Iaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~~a~~l~l~g~~~~a~e 165 (245)
T PF00378_consen 86 LANFPKPTIAAVNGHAVGGGFELALACDFRIAAEDAKFGFPEVRLGIFPGAGGTFRLPRLIGPSRARELLLTGEPISAEE 165 (245)
T ss_dssp HHHSSSEEEEEESSEEETHHHHHHHHSSEEEEETTTEEETGGGGGTSSSTSTHHHHHHHHHHHHHHHHHHHHTCEEEHHH
T ss_pred chhhhhheeecccccccccccccccccceEEeecccceeeeecccCcccccccccccceeeecccccccccccccchhHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410 160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS 239 (312)
Q Consensus 160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 239 (312)
|+++||||+|+|++++.+.+..
T Consensus 166 A~~~Glv~~v~~~~~l~~~a~~---------------------------------------------------------- 187 (245)
T PF00378_consen 166 ALELGLVDEVVPDEELDEEALE---------------------------------------------------------- 187 (245)
T ss_dssp HHHTTSSSEEESGGGHHHHHHH----------------------------------------------------------
T ss_pred HHhhcceeEEcCchhhhHHHHH----------------------------------------------------------
Confidence 9999999999999887654443
Q ss_pred CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeecc
Q 021410 240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILN 309 (312)
Q Consensus 240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~ 309 (312)
.+++++..||.+++.+|+.+++.....+.+.++.|.+.+..++. ++|++||+++|++|
T Consensus 188 ---------~a~~l~~~~~~a~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~e~~~~f~eK 245 (245)
T PF00378_consen 188 ---------LAKRLAAKPPSALRATKKALNRALEQSLEEALEFEQDLFAECFK---SEDFQEGIAAFLEK 245 (245)
T ss_dssp ---------HHHHHHTSCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHT---SHHHHHHHHHHHTT
T ss_pred ---------HHHHHhcCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcC---CHHHHHHHHHHhCc
Confidence 38999999999999999999999888999999999999999998 99999999999986
No 54
>PRK06072 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.4e-52 Score=367.75 Aligned_cols=231 Identities=25% Similarity=0.322 Sum_probs=206.3
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||++.|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|.|++++.... ...+...++.++..
T Consensus 12 ~itlnrp~~~Nal~~~~~~~l~~a~~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~-------~~~~~~~~~~~~~~ 84 (248)
T PRK06072 12 IVTMSRPDKLNALNLEMRNEFISKLKQINADPKIRVVIVTGEGRAFCVGADLSEFAPDF-------AIDLRETFYPIIRE 84 (248)
T ss_pred EEEECCcccccCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCcccCcCHHHHhhhh-------HHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999875311 12233445667788
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEM 160 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~eA 160 (312)
+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++|..+.++++||++|+|+||
T Consensus 85 l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~~~~~Gl~p~~g~~~~l~~~~g~~a~~lll~g~~~~a~eA 164 (248)
T PRK06072 85 IRFSDKIYISAINGVTAGACIGIALSTDFKFASRDVKFVTAFQRLGLASDTGVAYFLLKLTGQRFYEILVLGGEFTAEEA 164 (248)
T ss_pred HHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEecchhhcCcCCCchHHHHHHHHhhHHHHHHHHhCCccCHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999669999999999999999
Q ss_pred HHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccCC
Q 021410 161 MACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASL 240 (312)
Q Consensus 161 ~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 240 (312)
+++||||++ +++.+.+.
T Consensus 165 ~~~Glv~~~---~~~~~~a~------------------------------------------------------------ 181 (248)
T PRK06072 165 ERWGLLKIS---EDPLSDAE------------------------------------------------------------ 181 (248)
T ss_pred HHCCCcccc---chHHHHHH------------------------------------------------------------
Confidence 999999953 23332222
Q ss_pred CCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 241 INDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 241 ~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
+.+++|++.||.+++.+|++++.....++++.++.|.+.+..++. ++|++||+++|+++|+
T Consensus 182 -------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~d~~eg~~af~~kr~ 242 (248)
T PRK06072 182 -------EMANRISNGPFQSYIAAKRMINLVLYNDLEEFLEYESAIQGYLGK---TEDFKEGISSFKEKRE 242 (248)
T ss_pred -------HHHHHHHhCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHhC---ChhHHHHHHHHhcCCC
Confidence 348999999999999999999988888999999999999988887 9999999999999985
No 55
>PRK06144 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.6e-52 Score=371.73 Aligned_cols=234 Identities=25% Similarity=0.322 Sum_probs=204.6
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY 79 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (312)
+||||||+++|++|.+|+.+|.+++++++.|+++|+|||||.| ++||+|+|++++.... ..+....+...+.+++.
T Consensus 20 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVltg~g~~~F~aG~Dl~~~~~~~---~~~~~~~~~~~~~~~~~ 96 (262)
T PRK06144 20 RITFNRPAARNAMTWAMYEGLAEICEAIAADPSIRAVVLRGAGDKAFVAGTDIAQFRAFS---TAEDAVAYERRIDRVLG 96 (262)
T ss_pred EEEecCCcccCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCceecCcCHHHHhhcc---chhHHHHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999998 7999999999875421 11222234445567788
Q ss_pred HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCc-ccccCCCchHHHhhhcChHH-HHHHHhcCCCCCH
Q 021410 80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETL-IGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNG 157 (312)
Q Consensus 80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~-~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a 157 (312)
.+.++||||||+|||+|+|||++|+++||+|||+++++|++||++ +|++|++|++++|++++|.. ++++++||++++|
T Consensus 97 ~l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~~G~~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a 176 (262)
T PRK06144 97 ALEQLRVPTIAAIAGACVGGGAAIAAACDLRIATPSARFGFPIARTLGNCLSMSNLARLVALLGAARVKDMLFTARLLEA 176 (262)
T ss_pred HHHhCCCCEEEEECCeeeehHHHHHHhCCEEEecCCCEeechhHHhccCCCCccHHHHHHHHhCHHHHHHHHHcCCCcCH
Confidence 899999999999999999999999999999999999999999997 99999999999999999999 9999999999999
Q ss_pred HHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcc
Q 021410 158 AEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESE 237 (312)
Q Consensus 158 ~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 237 (312)
+||+++||||+|+|++++.+.+.+
T Consensus 177 ~eA~~~Glv~~vv~~~~l~~~a~~-------------------------------------------------------- 200 (262)
T PRK06144 177 EEALAAGLVNEVVEDAALDARADA-------------------------------------------------------- 200 (262)
T ss_pred HHHHHcCCcCeecCHHHHHHHHHH--------------------------------------------------------
Confidence 999999999999998877644433
Q ss_pred cCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 238 ASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 238 ~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
.+++|++.||.+++.+|+.++......+ +.+.+.+..++. ++|++||+.+|+++|+
T Consensus 201 -----------~a~~i~~~~~~a~~~~K~~l~~~~~~~l----~~~~~~~~~~~~---~~~~~e~~~af~~kr~ 256 (262)
T PRK06144 201 -----------LAELLAAHAPLTLRATKEALRRLRREGL----PDGDDLIRMCYM---SEDFREGVEAFLEKRP 256 (262)
T ss_pred -----------HHHHHHhCCHHHHHHHHHHHHHhhhcCH----HHHHHHHHHHhc---ChHHHHHHHHHhcCCC
Confidence 4899999999999999999987655444 444556666776 9999999999999885
No 56
>TIGR03189 dienoyl_CoA_hyt cyclohexa-1,5-dienecarbonyl-CoA hydratase. This enzyme, cyclohexa-1,5-dienecarbonyl-CoA hydratase, also called dienoyl-CoA hydratase, acts on the product of benzoyl-CoA reductase (EC 1.3.99.15). Benzoyl-CoA is a common intermediate in the degradation of many aromatic compounds, and this enzyme is part of an anaerobic pathway for dearomatization and degradation.
Probab=100.00 E-value=2.4e-52 Score=368.06 Aligned_cols=231 Identities=21% Similarity=0.267 Sum_probs=201.1
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||+ .|++|.+|+.+|.++++.++.||++|+|||||.|++||+|.|++++.. .....+.....+++..
T Consensus 13 ~itlnrp~-~Nal~~~~~~~l~~~l~~~~~~~~vr~vVl~g~g~~FcaG~Dl~~~~~-------~~~~~~~~~~~~~~~~ 84 (251)
T TIGR03189 13 RLRLARPK-ANIVDAAMIAALSAALGEHLEDSALRAVLLDAEGPHFSFGASVAEHMP-------DQCAAMLASLHKLVIA 84 (251)
T ss_pred EEEeCCCC-cCCCCHHHHHHHHHHHHHHHcCCCceEEEEECCCCceecCcChhhhCc-------hhHHHHHHHHHHHHHH
Confidence 58999997 599999999999999999999999999999999999999999997531 1112233445667888
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE 159 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e 159 (312)
+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++++|++++|.. +++|++||++++|+|
T Consensus 85 l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~-~~~~~l~~~vg~~~a~~l~ltg~~~~a~e 163 (251)
T TIGR03189 85 MLDSPVPILVAVRGQCLGGGLEVAAAGNLMFAAPDAKLGQPEIVLGVFAP-AASCLLPERMGRVAAEDLLYSGRSIDGAE 163 (251)
T ss_pred HHhCCCCEEEEecCeeeeHHHHHHHhCCEEEEcCCCEEeCchhhcCCCCC-chHHHHHHHhCHHHHHHHHHcCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999987 4578999999999 999999999999999
Q ss_pred HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410 160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS 239 (312)
Q Consensus 160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 239 (312)
|+++||||+|+|+.+ . .+.++
T Consensus 164 A~~~Glv~~v~~~~~-~-~a~~~--------------------------------------------------------- 184 (251)
T TIGR03189 164 GARIGLANAVAEDPE-N-AALAW--------------------------------------------------------- 184 (251)
T ss_pred HHHCCCcceecCcHH-H-HHHHH---------------------------------------------------------
Confidence 999999999997533 1 11111
Q ss_pred CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHH-HHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLV-REYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~-~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
.++++++.||.+++.+|++++.....++++.+. .|...+..++. ++|++||+++|+++|+
T Consensus 185 ---------~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~~---s~d~~eg~~af~ekr~ 245 (251)
T TIGR03189 185 ---------FDEHPAKLSASSLRFAVRAARLGMNERVKAKIAEVEALYLEELMA---THDAVEGLNAFLEKRP 245 (251)
T ss_pred ---------HHHHHHhCCHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHhC---CHhHHHHHHHHHhcCC
Confidence 258899999999999999999888888888764 77777777787 9999999999999985
No 57
>PRK07509 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.4e-52 Score=371.19 Aligned_cols=238 Identities=24% Similarity=0.243 Sum_probs=208.4
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHH----HHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKD----FFRTLYS 76 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~----~~~~~~~ 76 (312)
+||||||++.|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++.... ......... ....+.+
T Consensus 15 ~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 93 (262)
T PRK07509 15 DVRLNRPDKMNALDFAMFEELIATIKRLKKDRGIRAVILSGEGGAFCAGLDVKSVASSP-GNAVKLLFKRLPGNANLAQR 93 (262)
T ss_pred EEEecCcccccCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCCCCcCCCcCHHHHhccc-chhhhhHhhhhHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999875421 111111111 1122345
Q ss_pred HHHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCC
Q 021410 77 FIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKL 155 (312)
Q Consensus 77 ~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i 155 (312)
++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++|.. +.++++||+++
T Consensus 94 ~~~~~~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~~~a~~l~ltg~~~ 173 (262)
T PRK07509 94 VSLGWRRLPVPVIAALEGVCFGGGLQIALGADIRIAAPDTKLSIMEAKWGLVPDMAGTVSLRGLVRKDVARELTYTARVF 173 (262)
T ss_pred HHHHHHhCCCCEEEEECCeeecchHHHHHhCCEEEecCCCEeecchhccCCCCCchHHHHHHHHhCHHHHHHHHHcCCCc
Confidence 66678899999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred CHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHH
Q 021410 156 NGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLE 235 (312)
Q Consensus 156 ~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 235 (312)
+|+||+++||||+++++ +.+.+.
T Consensus 174 ~a~eA~~~Glv~~vv~~--~~~~a~------------------------------------------------------- 196 (262)
T PRK07509 174 SAEEALELGLVTHVSDD--PLAAAL------------------------------------------------------- 196 (262)
T ss_pred CHHHHHHcCChhhhhch--HHHHHH-------------------------------------------------------
Confidence 99999999999999953 332222
Q ss_pred cccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 236 SEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 236 ~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
+.++++++.||.+++.+|++++.....++.++++.|.+.+..++. ++|++||+.+|+++|+
T Consensus 197 ------------~~a~~l~~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~e~~~af~ekr~ 257 (262)
T PRK07509 197 ------------ALAREIAQRSPDAIAAAKRLINRSWTASVRALLARESVEQIRLLL---GKNQKIAVKAQMKKRA 257 (262)
T ss_pred ------------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---ChhHHHHHHHHhcCCC
Confidence 348899999999999999999998888999999999999988887 9999999999999985
No 58
>PRK07396 dihydroxynaphthoic acid synthetase; Validated
Probab=100.00 E-value=3.1e-52 Score=371.91 Aligned_cols=237 Identities=18% Similarity=0.225 Sum_probs=204.1
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY 79 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (312)
+||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++.... .........+ ....++.
T Consensus 25 ~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~-~~~~~~~~~~--~~~~~~~ 101 (273)
T PRK07396 25 KITINRPEVRNAFRPKTVKEMIDAFADARDDDNIGVIILTGAGDKAFCSGGDQKVRGYGG-YVDDDGVPRL--NVLDLQR 101 (273)
T ss_pred EEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEeCCCCceEeCcChhhhhccc-ccchhhhhhh--HHHHHHH
Confidence 5899999999999999999999999999999999999999999 6999999999864211 0011111111 1235667
Q ss_pred HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410 80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA 158 (312)
Q Consensus 80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~ 158 (312)
.+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +.+|++||+.++|+
T Consensus 102 ~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~~~~~~l~~~vG~~~a~~l~ltg~~~~A~ 181 (273)
T PRK07396 102 LIRTCPKPVIAMVAGYAIGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDGGYGASYLARIVGQKKAREIWFLCRQYDAQ 181 (273)
T ss_pred HHHhCCCCEEEEECCEEehHHHHHHHhCCEEEeeCCcEEecccccccccCCchHHHHHHHHhhHHHHHHHHHhCCCcCHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410 159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA 238 (312)
Q Consensus 159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 238 (312)
||+++||||+|+|++++.+.+..
T Consensus 182 eA~~~GLv~~vv~~~~l~~~a~~--------------------------------------------------------- 204 (273)
T PRK07396 182 EALDMGLVNTVVPLADLEKETVR--------------------------------------------------------- 204 (273)
T ss_pred HHHHcCCcCeecCHHHHHHHHHH---------------------------------------------------------
Confidence 99999999999998877654443
Q ss_pred CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
.+++|+..||.+++.+|++++.... .++...+.|.+.+...+. ++|++||+.+|+++|+
T Consensus 205 ----------~a~~la~~~~~a~~~~K~~l~~~~~-~~~~~~~~e~~~~~~~~~---~~d~~egi~af~~kr~ 263 (273)
T PRK07396 205 ----------WCREMLQNSPMALRCLKAALNADCD-GQAGLQELAGNATMLFYM---TEEAQEGRNAFNEKRQ 263 (273)
T ss_pred ----------HHHHHHhCCHHHHHHHHHHHHhhhc-cHHHHHHHHHHHHHHHhc---ChhHHHHHHHHhCCCC
Confidence 3899999999999999999987644 455555577777777777 9999999999999985
No 59
>PRK08260 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.9e-52 Score=376.27 Aligned_cols=240 Identities=23% Similarity=0.280 Sum_probs=204.3
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccC------------C-hHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG------------K-LEEC 67 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~------------~-~~~~ 67 (312)
+||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++....... . ....
T Consensus 16 ~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (296)
T PRK08260 16 TITLNRPDKLNAFTVTMARELIEAFDAADADDAVRAVIVTGAGRAFCAGADLSAGGNTFDLDAPRTPVEADEEDRADPSD 95 (296)
T ss_pred EEEeCCCcccCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCCeecCcChHHhhhcccccccccccccccccccchhH
Confidence 58999999999999999999999999999999999999999999999999999874311000 0 0111
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HH
Q 021410 68 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 146 (312)
Q Consensus 68 ~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~ 146 (312)
..+......++..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++
T Consensus 96 ~~~~~~~~~~~~~l~~~pkPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~ 175 (296)
T PRK08260 96 DGVRDGGGRVTLRIFDSLKPVIAAVNGPAVGVGATMTLAMDIRLASTAARFGFVFGRRGIVPEAASSWFLPRLVGLQTAL 175 (296)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEECCeeehHhHHHHHhCCEEEeeCCCEEecchhhcCcCCCcchhhhHHHhhCHHHHH
Confidence 22333345677889999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred HHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCC
Q 021410 147 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 226 (312)
Q Consensus 147 ~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (312)
+|++||++++|+||+++||||+|+|++++...+.
T Consensus 176 ~llltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~---------------------------------------------- 209 (296)
T PRK08260 176 EWVYSGRVFDAQEALDGGLVRSVHPPDELLPAAR---------------------------------------------- 209 (296)
T ss_pred HHHHcCCccCHHHHHHCCCceeecCHHHHHHHHH----------------------------------------------
Confidence 9999999999999999999999999877654333
Q ss_pred HHHHHHHHHcccCCCCchHHHHHHHHHHhc-CchHHHHHHHHHHhhhc--CCHHHHHHHHHHHHHHhhhcCCCCChhhhh
Q 021410 227 VEEIIDSLESEASLINDPWCGSTLRLLKEA-SPLSLKVSLRSIREGRF--QTFDECLVREYRMSLQGVSRLISGDFYEVS 303 (312)
Q Consensus 227 ~~~~~~~l~~~~~~~~~~~a~~~~~~i~~~-~p~a~~~~k~~l~~~~~--~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~ 303 (312)
+.+++|+.+ +|.+++.+|++++.... ..+. ....|...+..++. ++|++||+
T Consensus 210 ---------------------~~a~~i~~~~~~~a~~~~K~~l~~~~~~~~~~~-~~~~e~~~~~~~~~---~~d~~egi 264 (296)
T PRK08260 210 ---------------------ALAREIADNTSPVSVALTRQMMWRMAGADHPME-AHRVDSRAIYSRGR---SGDGKEGV 264 (296)
T ss_pred ---------------------HHHHHHHhcCChHHHHHHHHHHHhcccCCCcHH-HHHHHHHHHHHHcc---ChhHHHHH
Confidence 237888885 99999999999987643 2334 34567777777776 99999999
Q ss_pred heeeccCC
Q 021410 304 NFQILNKH 311 (312)
Q Consensus 304 ~a~l~~r~ 311 (312)
.+|+++|+
T Consensus 265 ~af~~kr~ 272 (296)
T PRK08260 265 SSFLEKRP 272 (296)
T ss_pred HHHhcCCC
Confidence 99999885
No 60
>PRK07827 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=6.1e-52 Score=367.98 Aligned_cols=238 Identities=23% Similarity=0.233 Sum_probs=210.2
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||++.|++|.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++.... ....+....+...+.+++..
T Consensus 18 ~i~lnrp~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 96 (260)
T PRK07827 18 TLTLDSPHNRNALSARLVAQLHDGLRAAAADPAVRAVVLTHTGGTFCAGADLSEAGGGG-GDPYDAAVARAREMTALLRA 96 (260)
T ss_pred EEEEcCccccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCcChHHHhhcc-cCchhHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999875321 01111222345556778888
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEM 160 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~eA 160 (312)
+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++++++++..+++++++|+.++|+||
T Consensus 97 l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~l~~~~a~~l~l~g~~~~a~eA 176 (260)
T PRK07827 97 IVELPKPVIAAIDGHVRAGGFGLVGACDIVVAGPESTFALTEARIGVAPAIISLTLLPRLSPRAAARYYLTGEKFGAAEA 176 (260)
T ss_pred HHhCCCCEEEEEcCeeecchhhHHHhCCEEEEcCCCEEeCcccccCCCCCcccchhHHhhhHHHHHHHHHhCCccCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999876559999999999999999
Q ss_pred HHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccCC
Q 021410 161 MACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASL 240 (312)
Q Consensus 161 ~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 240 (312)
+++||||++++ ++++.+.
T Consensus 177 ~~~Glv~~v~~--~l~~~a~------------------------------------------------------------ 194 (260)
T PRK07827 177 ARIGLVTAAAD--DVDAAVA------------------------------------------------------------ 194 (260)
T ss_pred HHcCCcccchH--HHHHHHH------------------------------------------------------------
Confidence 99999999974 3443333
Q ss_pred CCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 241 INDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 241 ~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
+.++++++.||.+++.+|++++......+++.++.|...+..++. ++|++||+++|+++|.
T Consensus 195 -------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~af~~kr~ 255 (260)
T PRK07827 195 -------ALLADLRRGSPQGLAESKALTTAAVLAGFDRDAEELTEESARLFV---SDEAREGMTAFLQKRP 255 (260)
T ss_pred -------HHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhc---ChhHHHHHHHHhcCCC
Confidence 347899999999999999999998888999999999999888887 9999999999999885
No 61
>PRK11423 methylmalonyl-CoA decarboxylase; Provisional
Probab=100.00 E-value=3.4e-52 Score=369.33 Aligned_cols=235 Identities=18% Similarity=0.228 Sum_probs=207.2
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeC-C-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGS-G-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI 78 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~-g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (312)
+||||||++.|++|.+|+.+|.++++.++.|+ +|+|||||. | ++||+|+|++++.... .+ ...+...++.++
T Consensus 16 ~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~-v~~vvltg~~~~~~FcaG~Dl~~~~~~~--~~---~~~~~~~~~~l~ 89 (261)
T PRK11423 16 TITFNNPAKRNALSKVLIDDLMQALSDLNRPE-IRVVILRAPSGSKVWSAGHDIHELPSGG--RD---PLSYDDPLRQIL 89 (261)
T ss_pred EEEEcCccccCCCCHHHHHHHHHHHHHHhcCC-ceEEEEECCCCCCeeECCcCHHHHhhcc--cc---HHHHHHHHHHHH
Confidence 58999999999999999999999999999988 999999996 3 8999999999874321 11 123344556788
Q ss_pred HHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCH
Q 021410 79 YLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNG 157 (312)
Q Consensus 79 ~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a 157 (312)
..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++|.. +.+++++|++++|
T Consensus 90 ~~i~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~~~g~~~~l~~~vg~~~a~~l~l~g~~~~a 169 (261)
T PRK11423 90 RMIQKFPKPVIAMVEGSVWGGAFELIMSCDLIIAASTSTFAMTPANLGVPYNLSGILNFTNDAGFHIVKEMFFTASPITA 169 (261)
T ss_pred HHHHhCCCCEEEEEecEEechHHHHHHhCCEEEecCCCEecCchhhcCCCCCccHHHHHHHHhHHHHHHHHHHcCCCcCH
Confidence 889999999999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcc
Q 021410 158 AEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESE 237 (312)
Q Consensus 158 ~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 237 (312)
+||+++||||+|+|++++++.+.
T Consensus 170 ~eA~~~GLv~~vv~~~~l~~~a~--------------------------------------------------------- 192 (261)
T PRK11423 170 QRALAVGILNHVVEVEELEDFTL--------------------------------------------------------- 192 (261)
T ss_pred HHHHHcCCcCcccCHHHHHHHHH---------------------------------------------------------
Confidence 99999999999999877764443
Q ss_pred cCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhc-CCH-HHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 238 ASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRF-QTF-DECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 238 ~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~-~~l-~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
+++++|++.||.+++.+|++++.... ..+ .+.++.|.+....++. ++|++||+.+|+++|.
T Consensus 193 ----------~~a~~l~~~~~~a~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---s~d~~eg~~af~~kr~ 255 (261)
T PRK11423 193 ----------QMAHHISEKAPLAIAVIKEQLRVLGEAHPMNPDEFERIQGLRRAVYD---SEDYQEGMNAFLEKRK 255 (261)
T ss_pred ----------HHHHHHHhcCHHHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHhC---ChhHHHHHHHHhccCC
Confidence 34899999999999999999986543 344 6888888888888887 9999999999999985
No 62
>PLN03214 probable enoyl-CoA hydratase/isomerase; Provisional
Probab=100.00 E-value=2.6e-52 Score=372.71 Aligned_cols=238 Identities=19% Similarity=0.229 Sum_probs=209.6
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC--CceeccCCchhHHHhhccCChHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG--RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI 78 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g--~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (312)
+||||||+ .|++|.+|+.+|.+++++++.|+++|+|||||.| ++||+|.|++++... ....+....+......++
T Consensus 24 ~itlnr~~-~Nal~~~~~~eL~~al~~~~~d~~vr~vVltg~g~~~~FcaG~Dl~~~~~~--~~~~~~~~~~~~~~~~~~ 100 (278)
T PLN03214 24 VVWLAKEP-VNSMTLAMWRSLDDALTALENDPTVRGVVFASGLRRDVFTAGNDIAELYAP--KTSAARYAEFWLTQTTFL 100 (278)
T ss_pred EEEECCCC-CCCCCHHHHHHHHHHHHHHHcCCCceEEEEeCCCCCCcccCccCHHHHhcc--ccchHHHHHHHHHHHHHH
Confidence 58999985 6999999999999999999999999999999997 699999999987531 111112223333345577
Q ss_pred HHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccc-cCCCchHHHhhhcChHH-HHHHHhcCCCCC
Q 021410 79 YLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGF-HPDAGASFYLSHLPGHL-GEFLALTGAKLN 156 (312)
Q Consensus 79 ~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~-~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~ 156 (312)
..+.++||||||+|||+|+|||++|+++|||||++++++|++||+++|+ +|++|+++++++++|.. +++|++||+.++
T Consensus 101 ~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~~p~~~~~~~l~~~~G~~~a~~llltg~~~~ 180 (278)
T PLN03214 101 VRLLRSRLATVCAIRGACPAGGCAVSLCCDYRLQTTEGTMGLNEVALGIPVPKFWARLFMGRVIDRKVAESLLLRGRLVR 180 (278)
T ss_pred HHHHcCCCCEEEEEcCcccchHHHHHHhCCEEEecCCCEecCcHHHhCCCCCChhHHHHHHHhcCHHHHHHHHHcCCccC
Confidence 7899999999999999999999999999999999999999999999999 59999999999999999 999999999999
Q ss_pred HHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHc
Q 021410 157 GAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLES 236 (312)
Q Consensus 157 a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 236 (312)
|+||+++||||+|+|++++.+.+.
T Consensus 181 a~eA~~~Glv~~vv~~~~l~~~a~-------------------------------------------------------- 204 (278)
T PLN03214 181 PAEAKQLGLIDEVVPAAALMEAAA-------------------------------------------------------- 204 (278)
T ss_pred HHHHHHcCCCcEecChHHHHHHHH--------------------------------------------------------
Confidence 999999999999999877654333
Q ss_pred ccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 237 EASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 237 ~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
+.+++|++.||.+++.+|++++.....+++++++.|.+.+...+. ++|++||+++|+++.+
T Consensus 205 -----------~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---s~d~~egi~aflek~~ 265 (278)
T PLN03214 205 -----------SAMERALKLPSAARAATKALLREEFSAAWEAYYEEEAKGGWKMLS---EPSIIKALGGVMERLS 265 (278)
T ss_pred -----------HHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHh
Confidence 347899999999999999999988888899999999998888887 9999999999998754
No 63
>PRK07854 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2e-51 Score=360.75 Aligned_cols=225 Identities=22% Similarity=0.317 Sum_probs=201.3
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||+++|++|.+|+.+|.+++++++.| ++|+|||||.|++||+|+|+++... ...+...++.++..
T Consensus 12 ~itlnrp~~~Nal~~~~~~~l~~al~~~~~~-~vr~vvl~g~g~~F~aG~Dl~~~~~---------~~~~~~~~~~~~~~ 81 (243)
T PRK07854 12 TIELQRPERRNALNAELCEELREAVRKAVDE-SARAIVLTGQGTVFCAGADLSGDVY---------ADDFPDALIEMLHA 81 (243)
T ss_pred EEEeCCCccccCCCHHHHHHHHHHHHHHhcC-CceEEEEECCCCceecccCCccchh---------HHHHHHHHHHHHHH
Confidence 5899999999999999999999999999865 8999999999999999999985211 11233445667888
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE 159 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e 159 (312)
+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +++|++||++++|+|
T Consensus 82 l~~~~kP~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~~a~~l~ltg~~~~a~e 161 (243)
T PRK07854 82 IDAAPVPVIAAINGPAIGAGLQLAMACDLRVVAPEAYFQFPVAKYGIALDNWTIRRLSSLVGGGRARAMLLGAEKLTAEQ 161 (243)
T ss_pred HHhCCCCEEEEecCcccccHHHHHHhCCEEEEcCCCEEeccccccccCCCccHHHHHHHHhCHHHHHHHHHcCCCcCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410 160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS 239 (312)
Q Consensus 160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 239 (312)
|+++||||+|++ ++ .+.
T Consensus 162 A~~~Glv~~v~~---~~-~a~----------------------------------------------------------- 178 (243)
T PRK07854 162 ALATGMANRIGT---LA-DAQ----------------------------------------------------------- 178 (243)
T ss_pred HHHCCCcccccC---HH-HHH-----------------------------------------------------------
Confidence 999999999964 22 122
Q ss_pred CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
+.+++|++.||.+++.+|++++.. .+++++++.|...+..++. ++|++||+++|+++|.
T Consensus 179 --------~~a~~l~~~~~~a~~~~K~~l~~~--~~~~~~~~~e~~~~~~~~~---~~d~~eg~~af~~kr~ 237 (243)
T PRK07854 179 --------AWAAEIAGLAPLALQHAKRVLNDD--GAIEEAWPAHKELFDKAWA---SQDAIEAQVARIEKRP 237 (243)
T ss_pred --------HHHHHHHhCCHHHHHHHHHHHHcc--CCHHHHHHHHHHHHHHHhc---CchHHHHHHHHhCCCC
Confidence 237899999999999999999875 6799999999998888887 9999999999999885
No 64
>PLN02921 naphthoate synthase
Probab=100.00 E-value=2.7e-51 Score=372.15 Aligned_cols=237 Identities=18% Similarity=0.221 Sum_probs=201.6
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY 79 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (312)
+||||||++.|+||.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++.... .........+ ....++.
T Consensus 79 ~ItLnrP~~~Nal~~~~~~eL~~al~~~~~d~~vrvVVLtg~G~k~FcaG~Dl~~~~~~~-~~~~~~~~~~--~~~~l~~ 155 (327)
T PLN02921 79 KITINRPERRNAFRPRTVKELQRAFNDARDDSSVGVIILTGKGTKAFCSGGDQAVRGKDG-YVGPDDAGRL--NVLDLQI 155 (327)
T ss_pred EEEECCCCCCCCCCHHHHHHHHHHHHHHhhCCCceEEEEecCCCCceecCcChhhhhccc-ccchhHHHHH--HHHHHHH
Confidence 5899999999999999999999999999999999999999999 8999999999764210 0111111111 1234667
Q ss_pred HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410 80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA 158 (312)
Q Consensus 80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~ 158 (312)
.+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +++|+++|+.++|+
T Consensus 156 ~l~~~~kPvIAaVnG~a~GGG~~LalacD~riA~~~A~f~~pe~~~Gl~p~~gg~~~L~rliG~~~A~ellltG~~~~A~ 235 (327)
T PLN02921 156 QIRRLPKPVIAMVAGYAVGGGHILHMVCDLTIAADNAVFGQTGPKVGSFDAGYGSSIMARLVGQKKAREMWFLARFYTAS 235 (327)
T ss_pred HHHhCCCCEEEEECCEEecHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHH
Confidence 88899999999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410 159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA 238 (312)
Q Consensus 159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 238 (312)
||+++||||+|+|++++.+.+.+
T Consensus 236 eA~~~GLV~~vv~~~~l~~~a~~--------------------------------------------------------- 258 (327)
T PLN02921 236 EALKMGLVNTVVPLDELEGETVK--------------------------------------------------------- 258 (327)
T ss_pred HHHHCCCceEEeCHHHHHHHHHH---------------------------------------------------------
Confidence 99999999999998887654443
Q ss_pred CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
.+++|++.||.+++.+|++++..... .....+.|...+..++. ++|++||+.+|+++|+
T Consensus 259 ----------~a~~la~~~p~al~~~K~~l~~~~~~-~~~~~~~~~~~~~~~~~---s~d~~egi~Af~ekr~ 317 (327)
T PLN02921 259 ----------WCREILRNSPTAIRVLKSALNAADDG-HAGLQELGGNATLLFYG---SEEGNEGRTAYLEGRA 317 (327)
T ss_pred ----------HHHHHHccCHHHHHHHHHHHHHhhcc-hhHHHHHHHHHHHHHhc---CHHHHHHHHHHhccCC
Confidence 38999999999999999999876543 33333344466666666 9999999999999985
No 65
>PRK07110 polyketide biosynthesis enoyl-CoA hydratase; Validated
Probab=100.00 E-value=3.7e-51 Score=360.43 Aligned_cols=229 Identities=21% Similarity=0.251 Sum_probs=207.2
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||++.|++|.+|+.+|.+++++++.|+++|+|||+|.|++||+|+|++++.... .+ . ..+.. ..++..
T Consensus 17 ~i~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~-~~--~--~~~~~--~~~~~~ 89 (249)
T PRK07110 17 QVTMQDRVNKNAFSDELCDQLHEAFDTIAQDPRYKVVILTGYPNYFATGGTQEGLLSLQ-TG--K--GTFTE--ANLYSL 89 (249)
T ss_pred EEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCeeCCcChHHHhhcc-ch--h--hhHhh--HHHHHH
Confidence 58999999999999999999999999999999999999999999999999999875321 11 1 11221 467788
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE 159 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e 159 (312)
+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++++++++|.. +.++++||++++++|
T Consensus 90 l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~~~a~~llltg~~~~a~e 169 (249)
T PRK07110 90 ALNCPIPVIAAMQGHAIGGGLVLGLYADIVVLSRESVYTANFMKYGFTPGMGATAILPEKLGLALGQEMLLTARYYRGAE 169 (249)
T ss_pred HHcCCCCEEEEecCceechHHHHHHhCCEEEEeCCCEecCchhccCCCCCchHHHHHHHHhCHHHHHHHHHcCCccCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410 160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS 239 (312)
Q Consensus 160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 239 (312)
|+++||||+|+|++++.+.+..
T Consensus 170 A~~~Glv~~vv~~~~l~~~a~~---------------------------------------------------------- 191 (249)
T PRK07110 170 LKKRGVPFPVLPRAEVLEKALE---------------------------------------------------------- 191 (249)
T ss_pred HHHcCCCeEEeChHHHHHHHHH----------------------------------------------------------
Confidence 9999999999998877644332
Q ss_pred CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhee
Q 021410 240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQ 306 (312)
Q Consensus 240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~ 306 (312)
.++++++.||.+++.+|+.++......+++.++.|...+...+. ++|++||+++.
T Consensus 192 ---------~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~~~~egi~~~ 246 (249)
T PRK07110 192 ---------LARSLAEKPRHSLVLLKDHLVADRRRRLPEVIEQEVAMHEKTFH---QPEVKRRIESL 246 (249)
T ss_pred ---------HHHHHHhCCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHhC---CHhHHHHHHHh
Confidence 37999999999999999999999889999999999999999998 99999999864
No 66
>PRK12478 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.1e-51 Score=368.95 Aligned_cols=237 Identities=20% Similarity=0.227 Sum_probs=199.1
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHH-H---hh-ccCChHHHHHH---HH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLY-H---FM-NQGKLEECKDF---FR 72 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~-~---~~-~~~~~~~~~~~---~~ 72 (312)
+||||||+++|+||.+|+.+|.+++++++.|++||+|||||.|++||+|+|+++.. . .. ..........+ ..
T Consensus 17 ~ItLnrP~~~NAl~~~~~~eL~~al~~~~~d~~vrvvVLtG~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (298)
T PRK12478 17 TITLNRPEQLNTIVPPMPDEIEAAIGLAERDQDIKVIVLRGAGRAFSGGYDFGGGFQHWGEAMMTDGRWDPGKDFAMVTA 96 (298)
T ss_pred EEEecCCcccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcccCcCccccccccchhcccccccCchhhhhhhhh
Confidence 58999999999999999999999999999999999999999999999999998621 1 00 00000011111 01
Q ss_pred H---HHHHHHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcc-cccCCCchHHHhhhcChHH-HHH
Q 021410 73 T---LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLI-GFHPDAGASFYLSHLPGHL-GEF 147 (312)
Q Consensus 73 ~---~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~-G~~p~~g~~~~l~r~~g~~-a~~ 147 (312)
. ....+..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++ |++| ++++ + +++|.. +++
T Consensus 97 ~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~A~f~~pe~~l~G~~~--~~~~-~-~~vG~~~A~~ 172 (298)
T PRK12478 97 RETGPTQKFMAIWRASKPVIAQVHGWCVGGASDYALCADIVIASDDAVIGTPYSRMWGAYL--TGMW-L-YRLSLAKVKW 172 (298)
T ss_pred hhcchHHHHHHHHhCCCCEEEEEccEEehhHHHHHHHCCEEEEcCCcEEeccccccccCCc--hhHH-H-HHhhHHHHHH
Confidence 1 1234566889999999999999999999999999999999999999999997 8875 3343 2 458998 999
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCH
Q 021410 148 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTV 227 (312)
Q Consensus 148 l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (312)
|++||++|+|+||+++||||+|||++++++.+.++
T Consensus 173 llltg~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~--------------------------------------------- 207 (298)
T PRK12478 173 HSLTGRPLTGVQAAEAELINEAVPFERLEARVAEV--------------------------------------------- 207 (298)
T ss_pred HHHcCCccCHHHHHHcCCcceecCHHHHHHHHHHH---------------------------------------------
Confidence 99999999999999999999999988887554433
Q ss_pred HHHHHHHHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhc-CCHHHHHHHHHHHHHHhhhcCCCCChh------
Q 021410 228 EEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRF-QTFDECLVREYRMSLQGVSRLISGDFY------ 300 (312)
Q Consensus 228 ~~~~~~l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~-~~l~~~l~~e~~~~~~~~~~~~~~d~~------ 300 (312)
+++|+..||.+++.+|++++.... .+++++++.|...+..++. ++|++
T Consensus 208 ----------------------a~~la~~~p~a~~~~K~~l~~~~~~~~l~~~~~~e~~~~~~~~~---s~d~~e~~~~~ 262 (298)
T PRK12478 208 ----------------------ATELARIPLSQLQAQKLIVNQAYENMGLASTQTLGGILDGLMRN---TPDALEFIRTA 262 (298)
T ss_pred ----------------------HHHHHhCCHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhc---ChhHHHHHHHH
Confidence 789999999999999999998766 4699999999999988887 99997
Q ss_pred --hhhheeeccCC
Q 021410 301 --EVSNFQILNKH 311 (312)
Q Consensus 301 --eg~~a~l~~r~ 311 (312)
||++||++||+
T Consensus 263 ~~egv~Af~ekR~ 275 (298)
T PRK12478 263 ETQGVRAAVERRD 275 (298)
T ss_pred HHHHHHHHHHhcC
Confidence 59999999986
No 67
>PRK08321 naphthoate synthase; Validated
Probab=100.00 E-value=8.2e-51 Score=367.15 Aligned_cols=240 Identities=17% Similarity=0.185 Sum_probs=202.6
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-------CceeccCCchhHHHhh---ccCCh-H--HH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-------RAFCAGGDIVSLYHFM---NQGKL-E--EC 67 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-------~~F~aG~Dl~~~~~~~---~~~~~-~--~~ 67 (312)
+||||||+++|++|.+|+.+|.++++.++.|+++++|||||.| ++||+|+|++++.... ...+. . ..
T Consensus 37 ~itlnrP~~~Nal~~~~~~~l~~al~~~~~d~~vrvvVltg~g~~~~~~~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~ 116 (302)
T PRK08321 37 RIAFDRPEVRNAFRPHTVDELYRALDHARMSPDVGCVLLTGNGPSPKDGGWAFCSGGDQRIRGRDGYQYAEGDEADTVDP 116 (302)
T ss_pred EEEeCCcccccCCCHHHHHHHHHHHHHHhhCCCcEEEEEeCCCCCCCCCCCeeecCcChhhhccccccccccccccchhh
Confidence 5899999999999999999999999999999999999999998 5999999999753210 00000 0 00
Q ss_pred HHHH-HHHHHHHHHHhhCCCcEEEEEccceecccceeecCCCeEEEe-CceeEecCCCcccccCCCchHHHhhhcChHH-
Q 021410 68 KDFF-RTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVAC-GKTVFATPETLIGFHPDAGASFYLSHLPGHL- 144 (312)
Q Consensus 68 ~~~~-~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~-~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~- 144 (312)
.... .....+...+.++||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|++|++++|+|++|..
T Consensus 117 ~~~~~~~~~~~~~~l~~~pkP~IAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~p~~~~~~~L~r~vG~~~ 196 (302)
T PRK08321 117 ARAGRLHILEVQRLIRFMPKVVIAVVPGWAAGGGHSLHVVCDLTLASREHARFKQTDADVGSFDGGYGSAYLARQVGQKF 196 (302)
T ss_pred hHHHHHHHHHHHHHHHcCCCCEEEEEcCeeehHHHHHHHhCCEEEEecCCCEEECCccccccCCCchHHHHHHHHhCHHH
Confidence 0111 112345667889999999999999999999999999999999 6999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCC
Q 021410 145 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGL 224 (312)
Q Consensus 145 a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (312)
+++|++||+.++|+||+++||||++||++++.+.+.+
T Consensus 197 A~~l~ltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~------------------------------------------- 233 (302)
T PRK08321 197 AREIFFLGRTYSAEEAHDMGAVNAVVPHAELETEALE------------------------------------------- 233 (302)
T ss_pred HHHHHHcCCccCHHHHHHCCCceEeeCHHHHHHHHHH-------------------------------------------
Confidence 9999999999999999999999999998887654443
Q ss_pred CCHHHHHHHHHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhh
Q 021410 225 DTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSN 304 (312)
Q Consensus 225 ~~~~~~~~~l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~ 304 (312)
++++|++.||.+++.+|++++.... .+.+....|.+.+..++. ++|++||+.
T Consensus 234 ------------------------~a~~la~~~~~a~~~~K~~l~~~~~-~~~~~~~~e~~~~~~~~~---~~d~~egi~ 285 (302)
T PRK08321 234 ------------------------WAREINGKSPTAMRMLKYAFNLTDD-GLVGQQLFAGEATRLAYM---TDEAQEGRD 285 (302)
T ss_pred ------------------------HHHHHHhCCHHHHHHHHHHHHhhhc-ccHHHHHHHHHHHHHHhc---CHHHHHHHH
Confidence 3899999999999999999987654 344445568888877777 999999999
Q ss_pred eeeccCC
Q 021410 305 FQILNKH 311 (312)
Q Consensus 305 a~l~~r~ 311 (312)
+|+++|+
T Consensus 286 af~ekr~ 292 (302)
T PRK08321 286 AFLEKRD 292 (302)
T ss_pred HHhccCC
Confidence 9999985
No 68
>PRK06190 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.7e-50 Score=357.28 Aligned_cols=219 Identities=22% Similarity=0.264 Sum_probs=197.9
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.... ..... ...++.++..
T Consensus 16 ~Itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~----~~~~~--~~~~~~~~~~ 89 (258)
T PRK06190 16 TLTLNRPEARNALSAALRRALFAALAEADADDDVDVVVLTGADPAFCAGLDLKELGGDG----SAYGA--QDALPNPSPA 89 (258)
T ss_pred EEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCccCCcCHHHHhccc----chhhH--HHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999875321 11111 2234567788
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE 159 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e 159 (312)
+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++|.. +.++++||++++|+|
T Consensus 90 i~~~~kPvIAaV~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ltg~~~~a~e 169 (258)
T PRK06190 90 WPAMRKPVIGAINGAAVTGGLELALACDILIASERARFADTHARVGILPGWGLSVRLPQKVGIGRARRMSLTGDFLDAAD 169 (258)
T ss_pred HHhCCCCEEEEECCEeecHHHHHHHhCCEEEEeCCCEEECcccccCcCCCccHHHHHHHHhCHHHHHHHHHhCCccCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410 160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS 239 (312)
Q Consensus 160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 239 (312)
|+++||||+++|++++.+.+.+
T Consensus 170 A~~~GLv~~vv~~~~l~~~a~~---------------------------------------------------------- 191 (258)
T PRK06190 170 ALRAGLVTEVVPHDELLPRARR---------------------------------------------------------- 191 (258)
T ss_pred HHHcCCCeEecCHhHHHHHHHH----------------------------------------------------------
Confidence 9999999999998877654433
Q ss_pred CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhh
Q 021410 240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVS 292 (312)
Q Consensus 240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~ 292 (312)
.+++|++.||.+++.+|++++.....++++.++.|...+...+.
T Consensus 192 ---------~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~ 235 (258)
T PRK06190 192 ---------LAASIAGNNPAAVRALKASYDDGAAAQTGDALALEAEAARAHNR 235 (258)
T ss_pred ---------HHHHHHcCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHc
Confidence 38899999999999999999998888999999999999988886
No 69
>PRK07112 polyketide biosynthesis enoyl-CoA hydratase; Validated
Probab=100.00 E-value=2.7e-50 Score=356.17 Aligned_cols=233 Identities=16% Similarity=0.174 Sum_probs=201.2
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||++.|++|.+|+.+|.++++.++ +++|+|||+|.|++||+|+|++++..... ...........++.++..
T Consensus 16 ~itlnrp~~~Nal~~~~~~~L~~~l~~~~--~~vr~vVl~g~g~~FsaG~Dl~~~~~~~~--~~~~~~~~~~~~~~~~~~ 91 (255)
T PRK07112 16 FLQLHRPEAQNTINDRLIAECMDVLDRCE--HAATIVVLEGLPEVFCFGADFSAIAEKPD--AGRADLIDAEPLYDLWHR 91 (255)
T ss_pred EEEEcCCCccCCCCHHHHHHHHHHHHHhh--cCceEEEEEcCCCCcccCcCHHHHhhccc--cchhhhhhHHHHHHHHHH
Confidence 58999999999999999999999999998 35999999999999999999998754211 111111122334567888
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE 159 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e 159 (312)
+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++| +.+|++++|.. +++++++|+.++|+|
T Consensus 92 l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~~-~~~l~~~vg~~~a~~l~l~g~~~~a~e 170 (255)
T PRK07112 92 LATGPYVTIAHVRGKVNAGGIGFVAASDIVIADETAPFSLSELLFGLIPACV-LPFLIRRIGTQKAHYMTLMTQPVTAQQ 170 (255)
T ss_pred HHcCCCCEEEEEecEEEcchhHHHHcCCEEEEcCCCEEeCchhhhccCcchh-hHHHHHHhCHHHHHHHHHhCCcccHHH
Confidence 9999999999999999999999999999999999999999999999999865 56799999999 999999999999999
Q ss_pred HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410 160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS 239 (312)
Q Consensus 160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 239 (312)
|+++||||+++|+++. ...
T Consensus 171 A~~~Glv~~vv~~~~~--~~~----------------------------------------------------------- 189 (255)
T PRK07112 171 AFSWGLVDAYGANSDT--LLR----------------------------------------------------------- 189 (255)
T ss_pred HHHcCCCceecCcHHH--HHH-----------------------------------------------------------
Confidence 9999999999986542 122
Q ss_pred CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
+.++++++.||.+++.+|++++.. ...+.+.++.|......++. ++|++||+.+|+++|+
T Consensus 190 --------~~a~~l~~~~p~a~~~~K~~~~~~-~~~~~~~~~~e~~~~~~~~~---~~~~~eg~~af~~kr~ 249 (255)
T PRK07112 190 --------KHLLRLRCLNKAAVARYKSYASTL-DDTVAAARPAALAANIEMFA---DPENLRKIARYVETGK 249 (255)
T ss_pred --------HHHHHHHhCCHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHc---ChHHHHHHHHHHcCCC
Confidence 237899999999999999999865 55789999999998888887 9999999999999885
No 70
>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH.
Probab=100.00 E-value=7e-49 Score=375.21 Aligned_cols=237 Identities=14% Similarity=0.056 Sum_probs=210.0
Q ss_pred CEEecCCCCC-------------CCCCHHHHHHHHHHHHHhhc-CCCceEEEEEeCCCc-eeccCCchhHHHhhccCChH
Q 021410 1 MAILNRPSAL-------------NALNTNMGAKLNKLFKAWEN-DPNIGFVSMKGSGRA-FCAGGDIVSLYHFMNQGKLE 65 (312)
Q Consensus 1 ~itln~p~~~-------------Nal~~~~~~~L~~~l~~~~~-d~~v~~vvl~g~g~~-F~aG~Dl~~~~~~~~~~~~~ 65 (312)
+||||||++. |+|+.+|+.+|.+++.+++. |+++|+|||||.|+. ||+|+|++.+. ..+..
T Consensus 270 ~itlnrP~~~~~~~~~~~~~~~~Nal~~~~~~~L~~a~~~~~~~d~~vr~vVl~g~G~~~F~aG~Dl~~~~----~~~~~ 345 (546)
T TIGR03222 270 TITLKGPKAAQPADIAAIVAQGANWWPLKLARELDDAILHLRTNELDIGLWVFRTQGDAELVLAADALLEA----HKDHW 345 (546)
T ss_pred EEEecChhhcCccccccccccccCcCCHHHHHHHHHHHHHHhhCCCCeEEEEEEcCCCCceecCcCccccc----cccch
Confidence 5899999999 99999999999999999984 599999999999987 99999998421 11111
Q ss_pred HHHHHHHHHHHHHHHHhhCCCcEEEEE-ccceeccc-ceeecCCCeEEE-------eCceeEecCCCcccccCCCchHHH
Q 021410 66 ECKDFFRTLYSFIYLLGTHLKPHVAIL-NGVTMGGG-AGVSIPGTFRVA-------CGKTVFATPETLIGFHPDAGASFY 136 (312)
Q Consensus 66 ~~~~~~~~~~~~~~~l~~~~kp~Iaav-~G~a~GgG-~~lal~~D~~ia-------~~~a~f~~pe~~~G~~p~~g~~~~ 136 (312)
.........++++..|..+||||||+| ||+|+||| ++|+++||+||| +++++|++||+++|++|++|++++
T Consensus 346 ~~~~~~~~~~~~~~~l~~~~kpviAav~~G~a~GgG~~eLalacD~~ia~~~~~~~~~~a~f~~~e~~lGl~p~~gg~~~ 425 (546)
T TIGR03222 346 FVRETIGYLRRTLARLDVSSRSLFALIEPGSCFAGTLAELAFAADRSYMLAFPDNNDPEPAITLSELNFGLYPMVNGLSR 425 (546)
T ss_pred hHHHHHHHHHHHHHHHHcCCCCEEEEECCCeEeHHHHHHHHHhCceeeecCCCCCCCCCCEEeCCccccccCCCcCcHHH
Confidence 112222334557788999999999999 89999999 999999999999 899999999999999999999999
Q ss_pred hhhcC-hHH-H--HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhh
Q 021410 137 LSHLP-GHL-G--EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVI 212 (312)
Q Consensus 137 l~r~~-g~~-a--~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (312)
|++++ |.. + .++++||+.|+|+||+++|||++++|++++.+.+.+
T Consensus 426 L~~~v~G~~~a~~~~~~ltg~~i~A~eA~~~Glv~~vv~~~~l~~~a~~------------------------------- 474 (546)
T TIGR03222 426 LATRFYAEPAPVAAVRDKIGQALDAEEAERLGLVTAAPDDIDWEDEIRI------------------------------- 474 (546)
T ss_pred HHHHhcCchhHHHHHHHHhCCCCCHHHHHHcCCcccccCchHHHHHHHH-------------------------------
Confidence 99998 887 7 569999999999999999999999998887654443
Q ss_pred hHHHHHHhhcCCCCHHHHHHHHHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHH-HHHHHHHHHHhh
Q 021410 213 HRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDEC-LVREYRMSLQGV 291 (312)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~-l~~e~~~~~~~~ 291 (312)
++++|++.||.+++.+|++++.....+++++ +.+|...+..++
T Consensus 475 ------------------------------------~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~ 518 (546)
T TIGR03222 475 ------------------------------------ALEERASFSPDALTGLEANLRFAGPETMETRIFGRLTAWQNWIF 518 (546)
T ss_pred ------------------------------------HHHHHHhcCHHHHHHHHHHHhhcCCcChhhhHHHHHHHHHHHHh
Confidence 3899999999999999999999999999999 999999999999
Q ss_pred hcCCCCChhh---hhheeeccCC
Q 021410 292 SRLISGDFYE---VSNFQILNKH 311 (312)
Q Consensus 292 ~~~~~~d~~e---g~~a~l~~r~ 311 (312)
. ++|.+| |+++|++||+
T Consensus 519 ~---~~d~~e~~~g~~af~ekr~ 538 (546)
T TIGR03222 519 N---RPNAVGENGALKVYGSGKK 538 (546)
T ss_pred c---CCcccchhhHHHHHccCCC
Confidence 8 999999 9999999996
No 71
>PRK05869 enoyl-CoA hydratase; Validated
Probab=100.00 E-value=1.8e-48 Score=337.19 Aligned_cols=200 Identities=21% Similarity=0.310 Sum_probs=178.5
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||++ |++|++|+.+|.+++++++.|+++|+|||||.|++||+|+|++++.... ......+...+.+++.+
T Consensus 20 ~itlnrp~~-Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~----~~~~~~~~~~~~~~~~~ 94 (222)
T PRK05869 20 TLLLSRPPT-NALTRQVYREIVAAANELGRRDDVAAVILYGGHEIFSAGDDMPELRTLS----AQEADTAARVRQQAVDA 94 (222)
T ss_pred EEEECCCCC-CCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcCcCcCHHHHhccC----hhhHHHHHHHHHHHHHH
Confidence 589999985 9999999999999999999999999999999999999999999875321 11222233445678889
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE 159 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e 159 (312)
+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++++++++|.. ++++++||++++|+|
T Consensus 95 i~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ig~~~a~~l~ltg~~~~a~e 174 (222)
T PRK05869 95 VAAIPKPTVAAITGYALGAGLTLALAADWRVSGDNVKFGATEILAGLAPSGDGMARLTRAAGPSRAKELVFSGRFFDAEE 174 (222)
T ss_pred HHhCCCCEEEEEcCEeecHHHHHHHhCCEEEecCCCEEcCchhccCCCCCccHHHHHHHHhCHHHHHHHHHcCCCcCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410 160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS 239 (312)
Q Consensus 160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 239 (312)
|+++||||+++|++++.+.+.
T Consensus 175 A~~~Glv~~vv~~~~l~~~a~----------------------------------------------------------- 195 (222)
T PRK05869 175 ALALGLIDEMVAPDDVYDAAA----------------------------------------------------------- 195 (222)
T ss_pred HHHCCCCCEeeCchHHHHHHH-----------------------------------------------------------
Confidence 999999999999887764443
Q ss_pred CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhh
Q 021410 240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGR 272 (312)
Q Consensus 240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~ 272 (312)
+.+++|+..||.+++.+|++++...
T Consensus 196 --------~~a~~ia~~~~~a~~~~K~~~~~~~ 220 (222)
T PRK05869 196 --------AWARRFLDGPPHALAAAKAGISDVY 220 (222)
T ss_pred --------HHHHHHHcCCHHHHHHHHHHHHHHh
Confidence 3488999999999999999998654
No 72
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=100.00 E-value=2.6e-48 Score=386.38 Aligned_cols=277 Identities=18% Similarity=0.228 Sum_probs=217.5
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.... ..+......+....+.++..
T Consensus 19 ~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 97 (715)
T PRK11730 19 ELVFDAPGSVNKLDRATLASLGEALDALEAQSDLKGLLLTSAKDAFIVGADITEFLSLF-AAPEEELSQWLHFANSIFNR 97 (715)
T ss_pred EEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCcEEEEEECCCCccccCcCHHHHhhhc-cCCHHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999875321 11222334455566778888
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE 159 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e 159 (312)
+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. +++|++||++++|+|
T Consensus 98 i~~~~kPvIAav~G~a~GgG~~LAlacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~rlvG~~~A~~llltG~~~~A~e 177 (715)
T PRK11730 98 LEDLPVPTVAAINGYALGGGCECVLATDYRVASPDARIGLPETKLGIMPGFGGTVRLPRLIGADNALEWIAAGKDVRAED 177 (715)
T ss_pred HHcCCCCEEEEECCEeehHHHHHHHhCCEEEEcCCCEEeCchhhcCCCCCchHHHHHHHhcCHHHHHHHHHcCCcCCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred HHHcCccceecCCCChhHHHHHHh-hhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410 160 MMACGLATHYSVSEKLPLIEEELG-KLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA 238 (312)
Q Consensus 160 A~~~Glv~~vv~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 238 (312)
|+++||||+++|++++.+.+.+++ +++..+.. ... ... +...... .+.......++
T Consensus 178 A~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~-~~~----~~~---~~~~p~a---------~~~~~~~~~~~------ 234 (715)
T PRK11730 178 ALKVGAVDAVVAPEKLQEAALALLKQAIAGKLD-WKA----RRQ---PKLEPLK---------LSKIEAMMSFT------ 234 (715)
T ss_pred HHHCCCCeEecCHHHHHHHHHHHHHHHhhcCCc-ccc----ccC---ccccccc---------ccchhHHHHHH------
Confidence 999999999999988877666663 33322100 000 000 0000000 00000000000
Q ss_pred CCCCchHHHH-HHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 239 SLINDPWCGS-TLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 239 ~~~~~~~a~~-~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
.+.+ +.++..+..|.++ .++++++.+...+++++++.|.+.+..++. |+|++||+++|+++|.
T Consensus 235 ------~~k~~~~~~~~~~~pa~~-~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~---s~d~~egi~aF~~~~~ 298 (715)
T PRK11730 235 ------TAKGMVAQKAGKHYPAPM-TAVKTIEAAAGLGRDEALELEAKGFVKLAK---TNVARALVGIFLNDQY 298 (715)
T ss_pred ------HHHHHHHHhhccCCccHH-HHHHHHHHHhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHH
Confidence 1111 1244566677777 588899998888999999999999999998 9999999999998863
No 73
>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional
Probab=100.00 E-value=2.5e-48 Score=372.64 Aligned_cols=237 Identities=14% Similarity=0.045 Sum_probs=209.2
Q ss_pred CEEecCCCCC-------------CCCCHHHHHHHHHHHHHhhc-CCCceEEEEEeCC-CceeccCCchhHHHhhccCChH
Q 021410 1 MAILNRPSAL-------------NALNTNMGAKLNKLFKAWEN-DPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLE 65 (312)
Q Consensus 1 ~itln~p~~~-------------Nal~~~~~~~L~~~l~~~~~-d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~ 65 (312)
+||||||+++ |+||.+|+.+|.+++++++. |+++|+|||||.| ++||+|+|++.+. . .+..
T Consensus 274 ~itlnrP~~~Na~~~~~~~~~~~Nal~~~~~~eL~~al~~~~~~d~~vr~vVltg~G~~~F~aG~Dl~~~~-~---~~~~ 349 (550)
T PRK08184 274 TITVKAPTAAQPADIAGIVAAGAAWWPLQMARELDDAILHLRTNELDIGTWVLKTEGDAAAVLAADATLLA-H---KDHW 349 (550)
T ss_pred EEEEeCcccccccccccccccccccCCHHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCCcEEeCCChhhhc-c---cchH
Confidence 5899999988 68999999999999999996 7999999999999 5999999987321 1 1111
Q ss_pred HHHHHHHHHHHHHHHHhhCCCcEEEEEc-cceeccc-ceeecCCCeEEEe-------CceeEecCCCcccccCCCchHHH
Q 021410 66 ECKDFFRTLYSFIYLLGTHLKPHVAILN-GVTMGGG-AGVSIPGTFRVAC-------GKTVFATPETLIGFHPDAGASFY 136 (312)
Q Consensus 66 ~~~~~~~~~~~~~~~l~~~~kp~Iaav~-G~a~GgG-~~lal~~D~~ia~-------~~a~f~~pe~~~G~~p~~g~~~~ 136 (312)
.........+.++..+..+||||||+|| |+|+||| ++|+++||+|||+ ++++|++||+++|++|++|++++
T Consensus 350 ~~~~~~~~~~~~~~~l~~~~kPvIAaV~~G~a~GgG~~eLalacD~~ia~~~~~~~~~~a~f~~pe~~~Gl~p~~gg~~~ 429 (550)
T PRK08184 350 LVRETRGYLRRTLKRLDVTSRSLFALIEPGSCFAGTLAELALAADRSYMLALPDDNDPAPAITLSALNFGLYPMVNGLSR 429 (550)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCEEEEECCCceehhHHHHHHHHCChhhhcCCCCCCCCCCEEECccccccCCCCCCcHHH
Confidence 1122233445677889999999999997 9999999 9999999999999 99999999999999999999999
Q ss_pred hhhc-ChHH-HHHH--HhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhh
Q 021410 137 LSHL-PGHL-GEFL--ALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVI 212 (312)
Q Consensus 137 l~r~-~g~~-a~~l--~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (312)
|+|+ +|.. ++++ ++||++|+|+||+++||||+++|++++++.+..+
T Consensus 430 L~r~~vG~~~A~~~~l~~tg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~------------------------------ 479 (550)
T PRK08184 430 LARRFYGEPDPLAAVRAKIGQPLDADAAEELGLVTAAPDDIDWEDEVRIA------------------------------ 479 (550)
T ss_pred hHHHhcChHHHHHHHHHHhCCcCCHHHHHHcCCcccccChHHHHHHHHHH------------------------------
Confidence 9988 6998 8886 5899999999999999999999998887544433
Q ss_pred hHHHHHHhhcCCCCHHHHHHHHHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHH-HHHHHHHHHHhh
Q 021410 213 HRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDEC-LVREYRMSLQGV 291 (312)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~-l~~e~~~~~~~~ 291 (312)
+++|++.||.+++.+|++++.....+++++ +.+|.+.+..++
T Consensus 480 -------------------------------------a~~ia~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~ 522 (550)
T PRK08184 480 -------------------------------------LEERASLSPDALTGMEANLRFAGPETMETRIFGRLTAWQNWIF 522 (550)
T ss_pred -------------------------------------HHHHHhCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHh
Confidence 899999999999999999999999999999 999999999988
Q ss_pred hcCCCCChhh---hhheeeccCC
Q 021410 292 SRLISGDFYE---VSNFQILNKH 311 (312)
Q Consensus 292 ~~~~~~d~~e---g~~a~l~~r~ 311 (312)
. ++|.+| |+++|++||+
T Consensus 523 ~---~~d~~e~~~g~~af~ekr~ 542 (550)
T PRK08184 523 Q---RPNAVGEKGALKVYGTGQK 542 (550)
T ss_pred c---CCcccccchHHHHhccCCC
Confidence 8 999999 9999999986
No 74
>TIGR03200 dearomat_oah 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase. Members of this protein family are 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase, a ring-hydrolyzing enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=3e-47 Score=342.68 Aligned_cols=272 Identities=17% Similarity=0.239 Sum_probs=213.7
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY 79 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (312)
+||||||+++|++|.+|+.+|.++++.++.|+++++|||||.| ++||+|+|++++..... ........+...+++++.
T Consensus 40 ~ItLNRP~k~NAls~~ml~eL~~al~~~~~D~dVrvVVLTG~G~kaFCAG~DLke~~~~~~-~~~~~~~~~~~~~~~l~~ 118 (360)
T TIGR03200 40 WIILDNPKQYNSYTTDMVKAIILAFRRASSDRDVVAVVFTAVGDKAFCTGGNTKEYAEYYA-GNPQEYRQYMRLFNDMVS 118 (360)
T ss_pred EEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEcCCCCcccCCcCHHHHhhhcc-cChhHHHHHHHHHHHHHH
Confidence 4899999999999999999999999999999999999999999 69999999998754321 112233445555567888
Q ss_pred HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410 80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA 158 (312)
Q Consensus 80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~ 158 (312)
.+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++++++||++++|+
T Consensus 119 ~i~~~pKPVIAAVnG~AiGGGleLALaCDlrIAse~A~Fg~PE~rlGl~P~~Ggt~rLprlvG~~rA~~llltGe~~sA~ 198 (360)
T TIGR03200 119 AILGCDKPVICRVNGMRIGGGQEIGMAADFTIAQDLANFGQAGPKHGSAPIGGATDFLPLMIGCEQAMVSGTLCEPWSAH 198 (360)
T ss_pred HHHhCCCCEEEEECCEeeeHHHHHHHhCCEEEEcCCCEEeCchhccCCCCCccHHHHHHHhhCHHHHHHHHHhCCcCcHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred HHHHcCccceecCCCCh------------hHHHHHHhhhhcCCH---HHHHHHHHHhccccCCCcchhhhHHHHHHhhcC
Q 021410 159 EMMACGLATHYSVSEKL------------PLIEEELGKLVTDDP---SVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFG 223 (312)
Q Consensus 159 eA~~~Glv~~vv~~~~l------------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (312)
||+++||||+++|+.++ ++..+.+.++...++ ..++..|..+......
T Consensus 199 EA~~~GLVd~VVp~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~----------------- 261 (360)
T TIGR03200 199 KAKRLGIIMDVVPALKVDGKFVANPLVVTDRYLDEFGRIVHGEFKAGDELKAGKELIKQGTID----------------- 261 (360)
T ss_pred HHHHcCChheecCchhcCcchhcCcccchHHHHHHHhHHhcCCCcchhHHHHHHHHHhcccch-----------------
Confidence 99999999999998887 445555544433322 2455555554432111
Q ss_pred CCCHHHHHHHHHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhh
Q 021410 224 LDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVS 303 (312)
Q Consensus 224 ~~~~~~~~~~l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~ 303 (312)
...+-+. -.++..++....|.++.-+++-+|......+...-..-...+..-+ ..+..+|+
T Consensus 262 ---~~~l~~~------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 322 (360)
T TIGR03200 262 ---LSLLDEA------------VEALCAKLLNTFPECLTKSIEELRKPKLFAWNQNKENSRAWLALNM----MNEARTGF 322 (360)
T ss_pred ---HhHHHHH------------HHHHHHHHHHhchHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHhhc----ccccchhh
Confidence 0111111 1124667888889999999999987776665555444444443333 57889999
Q ss_pred heeecc
Q 021410 304 NFQILN 309 (312)
Q Consensus 304 ~a~l~~ 309 (312)
+||-++
T Consensus 323 ~~~~~~ 328 (360)
T TIGR03200 323 RAFNEG 328 (360)
T ss_pred HHHhcc
Confidence 999984
No 75
>PRK08290 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.4e-47 Score=343.92 Aligned_cols=222 Identities=22% Similarity=0.287 Sum_probs=189.9
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhc-c----------------CC
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMN-Q----------------GK 63 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~-~----------------~~ 63 (312)
+||||||+++|++|.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++..... . ..
T Consensus 16 ~ItlnrP~~~Nal~~~~~~eL~~~l~~~~~d~~vrvvVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (288)
T PRK08290 16 RITLNRPEARNAQNRQMLYELDAAFRRAEADDAVRVIVLAGAGKHFSAGHDLGSGTPGRDRDPGPDQHPTLWWDGATKPG 95 (288)
T ss_pred EEEecCccccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCccccCCCccccccccccccccccccccccccccccc
Confidence 589999999999999999999999999999999999999999999999999997632110 0 00
Q ss_pred -hHHHHHHHHHHHHHHHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcCh
Q 021410 64 -LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG 142 (312)
Q Consensus 64 -~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g 142 (312)
..........+..++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|+ |+ ++++++++++|
T Consensus 96 ~~~~~~~~~~~~~~~~~~l~~~pkPvIAaVnG~a~GgG~~lalacD~ria~e~a~f~~pe~~lGl-~~-~~~~~l~~~iG 173 (288)
T PRK08290 96 VEQRYAREWEVYLGMCRRWRDLPKPTIAQVQGACIAGGLMLAWVCDLIVASDDAFFSDPVVRMGI-PG-VEYFAHPWELG 173 (288)
T ss_pred hhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeeHHHHHHHHhCCEEEeeCCCEecCcccccCc-Cc-chHHHHHHHhh
Confidence 0011112233455667888999999999999999999999999999999999999999999998 44 45677899999
Q ss_pred HH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhh
Q 021410 143 HL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKC 221 (312)
Q Consensus 143 ~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (312)
.. +++|++||+.|+|+||+++||||++||++++.+.+.+
T Consensus 174 ~~~A~~llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~---------------------------------------- 213 (288)
T PRK08290 174 PRKAKELLFTGDRLTADEAHRLGMVNRVVPRDELEAETLE---------------------------------------- 213 (288)
T ss_pred HHHHHHHHHcCCCCCHHHHHHCCCccEeeCHHHHHHHHHH----------------------------------------
Confidence 99 9999999999999999999999999998877654443
Q ss_pred cCCCCHHHHHHHHHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcC-CHHHHHHHHHHHHHHhh
Q 021410 222 FGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQ-TFDECLVREYRMSLQGV 291 (312)
Q Consensus 222 ~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~-~l~~~l~~e~~~~~~~~ 291 (312)
.+++|++.||.+++.+|++++..... +++++++.|.......+
T Consensus 214 ---------------------------~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (288)
T PRK08290 214 ---------------------------LARRIAAMPPFGLRLTKRAVNQTLDAQGFRAALDAVFDLHQLGH 257 (288)
T ss_pred ---------------------------HHHHHHhCCHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHcc
Confidence 38999999999999999999988765 79999999999988776
No 76
>KOG1679 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=100.00 E-value=1.4e-48 Score=319.29 Aligned_cols=241 Identities=21% Similarity=0.263 Sum_probs=221.7
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY 79 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (312)
+|-+|||.+.|+++.-|+.+|.++++++..|+.+|+|+|++.- +.||+|+||++-... .+.+...|...++.++.
T Consensus 43 vl~mNRpa~kNsl~r~~~~~l~~~l~~lk~D~~~RvvilrS~vpgvFCaGADLKER~~M----s~~Ev~~fV~~lR~~~~ 118 (291)
T KOG1679|consen 43 ILNMNRPAKKNSLGRVFVKQLREVLDELKYDNKVRVVILRSLVPGVFCAGADLKERKTM----SPSEVTRFVNGLRGLFN 118 (291)
T ss_pred EEecCChhhhccHHHHHHHHHHHHHHHHhhCCceeEEEEecCCCceeecCcchHhhhcC----CHHHHHHHHHHHHHHHH
Confidence 3679999999999999999999999999999999999999975 999999999986543 36788889999999999
Q ss_pred HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410 80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA 158 (312)
Q Consensus 80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~ 158 (312)
.+.++|.||||+|+|.++|||++++++||+|+|+.+++|+++|++++++|+.|++++|+|++|.. ++++++||+.+++.
T Consensus 119 dIe~Lp~P~IAAidG~ALGGGLElALACDiRva~s~akmGLvET~laiiPGaGGtQRLpR~vg~alaKELIftarvl~g~ 198 (291)
T KOG1679|consen 119 DIERLPQPVIAAIDGAALGGGLELALACDIRVAASSAKMGLVETKLAIIPGAGGTQRLPRIVGVALAKELIFTARVLNGA 198 (291)
T ss_pred HHHhCCccceehhcchhcccchhhhhhccceehhhhccccccccceeeecCCCccchhHHHHhHHHHHhHhhhheeccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410 159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA 238 (312)
Q Consensus 159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 238 (312)
||...||||++|...+-.+.+.
T Consensus 199 eA~~lGlVnhvv~qneegdaa~---------------------------------------------------------- 220 (291)
T KOG1679|consen 199 EAAKLGLVNHVVEQNEEGDAAY---------------------------------------------------------- 220 (291)
T ss_pred hHHhcchHHHHHhcCccccHHH----------------------------------------------------------
Confidence 9999999999997665332221
Q ss_pred CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
+-+.+++++|.-+.|.++++.|..++.+...++..++..|.....+.+. +.|..||+.+|-+||.
T Consensus 221 -----~kal~lA~eilp~gPiavr~aKlAIn~G~evdiasgl~iEe~CYaq~i~---t~drLeglaaf~ekr~ 285 (291)
T KOG1679|consen 221 -----QKALELAREILPQGPIAVRLAKLAINLGMEVDIASGLSIEEMCYAQIIP---TKDRLEGLAAFKEKRK 285 (291)
T ss_pred -----HHHHHHHHHhccCCchhhhHHHHHhccCceecccccccHHHHHHHhcCc---HHHHHHHHHHHHhhcC
Confidence 1123568999999999999999999999999999999999999999988 9999999999999985
No 77
>PRK08788 enoyl-CoA hydratase; Validated
Probab=100.00 E-value=9e-47 Score=336.72 Aligned_cols=236 Identities=16% Similarity=0.175 Sum_probs=189.5
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhc-----CCCceEEEEEeC-CCceeccCCchhHHHhhccCChHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWEN-----DPNIGFVSMKGS-GRAFCAGGDIVSLYHFMNQGKLEECKDFFRTL 74 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~-----d~~v~~vvl~g~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~ 74 (312)
+|||| |+++|++|.+|+.+|.+++++++. |+++|+|||+|. |++||+|+|++++.......+.+....+...+
T Consensus 29 ~itl~-p~~~Nal~~~~~~eL~~al~~~~~~~~~~d~~vrvVVltg~~gk~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~ 107 (287)
T PRK08788 29 WMYMR-AQPRPCFNLELLDDIMNLQRAIRQRLDDSGLPVDFWVLASDVPGVFNLGGDLALFAELIRAGDRDALLAYARAC 107 (287)
T ss_pred EEEEC-CCCCCCCCHHHHHHHHHHHHHHHhhccCCCCCeEEEEEEcCCCCceEeCcCHHHHhhhccccchHHHHHHHHHH
Confidence 58996 999999999999999999999998 899999999999 79999999999875321111112112222222
Q ss_pred HHHHHHHh---hCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHh
Q 021410 75 YSFIYLLG---THLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLAL 150 (312)
Q Consensus 75 ~~~~~~l~---~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~l 150 (312)
...+..+. .+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++++++++|.. +++|++
T Consensus 108 ~~~~~~l~~~~~~pkPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pev~lGl~p~~g~~~~l~~~vG~~~A~elll 187 (287)
T PRK08788 108 VDGVHAFHRGFGAGAISIALVQGDALGGGFEAALSHHTIIAERGAKMGFPEILFNLFPGMGAYSFLARRVGPKLAEELIL 187 (287)
T ss_pred HHHHHHHHHhcCCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEeeCchhhhCcCCCchHHHHHHHHhhHHHHHHHHH
Confidence 33333333 79999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred cCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHH
Q 021410 151 TGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEI 230 (312)
Q Consensus 151 tg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (312)
||+.++|+||+++||||+++|++++.+.+.+
T Consensus 188 tG~~l~A~eA~~~GLV~~vv~~~el~~~a~~------------------------------------------------- 218 (287)
T PRK08788 188 SGKLYTAEELHDMGLVDVLVEDGQGEAAVRT------------------------------------------------- 218 (287)
T ss_pred cCCCCCHHHHHHCCCCcEecCchHHHHHHHH-------------------------------------------------
Confidence 9999999999999999999998887654443
Q ss_pred HHHHHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheee
Q 021410 231 IDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQI 307 (312)
Q Consensus 231 ~~~l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l 307 (312)
++++|+.. |.+....|+..+.....++++.++.|......+.+ ..+.-++-|..|.
T Consensus 219 ------------------~a~~ia~~-~~~~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 274 (287)
T PRK08788 219 ------------------FIRKSKRK-LNGWRAMLRARRRVNPLSLEELMDITEIWVDAALQ--LEEKDLRTMERLV 274 (287)
T ss_pred ------------------HHHHHhcC-ccHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhh--cccccHHHHHHHH
Confidence 36778876 77777777776666667889999988777665554 1344455565554
No 78
>KOG1681 consensus Enoyl-CoA isomerase [Lipid transport and metabolism]
Probab=100.00 E-value=1.2e-47 Score=316.71 Aligned_cols=241 Identities=22% Similarity=0.322 Sum_probs=212.1
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhc---cC-----ChHHHHHHHHH
Q 021410 2 AILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMN---QG-----KLEECKDFFRT 73 (312)
Q Consensus 2 itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~---~~-----~~~~~~~~~~~ 73 (312)
+.||||.|.|++|..|+.|+.++++.+..||++|+|||+|+|++||+|.|+..+..... ++ .....+++...
T Consensus 35 v~lnRPsk~Nal~~~~w~E~~~cf~~l~~dpdcr~iilsg~GKhFcaGIDl~~~~~~~~~~~~~dd~aR~g~~lrr~Ik~ 114 (292)
T KOG1681|consen 35 VQLNRPSKLNALNKVFWREFKECFDSLDRDPDCRAIILSGAGKHFCAGIDLNDMASDRILQPEGDDVARKGRSLRRIIKR 114 (292)
T ss_pred EEecCcchhhhhhHHHHHHHHHHHHhhccCCCceEEEEecCCcceecccCcchhhhhhccccccchHhhhhHHHHHHHHH
Confidence 67999999999999999999999999999999999999999999999999887654311 11 12234556677
Q ss_pred HHHHHHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH--HHHHHhc
Q 021410 74 LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL--GEFLALT 151 (312)
Q Consensus 74 ~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~--a~~l~lt 151 (312)
+++.+..|.+||||||++|||+|+|+|+.|..+||+|+|+++|.|..-|+.+|+..+.|...+||+.+|.. ++++.+|
T Consensus 115 ~Q~~~t~ie~CpKPVIaavHg~CiGagvDLiTAcDIRycsqDAffsvkEVDvglaADvGTL~RlpkvVGn~s~~~elafT 194 (292)
T KOG1681|consen 115 YQDTFTAIERCPKPVIAAVHGACIGAGVDLITACDIRYCSQDAFFSVKEVDVGLAADVGTLNRLPKVVGNQSLARELAFT 194 (292)
T ss_pred HHHHHHHHHhCChhHHHHHHhhhccccccceeecceeeecccceeeeeeeeeehhhchhhHhhhhHHhcchHHHHHHHhh
Confidence 78889999999999999999999999999999999999999999999999999999999999999999965 9999999
Q ss_pred CCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHH
Q 021410 152 GAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEII 231 (312)
Q Consensus 152 g~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (312)
++.++|.||++.|||++|+|+.+... ...
T Consensus 195 ar~f~a~EAl~~GLvSrvf~dk~~ll-~~~-------------------------------------------------- 223 (292)
T KOG1681|consen 195 ARKFSADEALDSGLVSRVFPDKEELL-NGA-------------------------------------------------- 223 (292)
T ss_pred hhhcchhhhhhcCcchhhcCCHHHHH-hhh--------------------------------------------------
Confidence 99999999999999999998754221 111
Q ss_pred HHHHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 232 DSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 232 ~~l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
..+++.|+.+||.++..||+.|+++...+.++.|..=..+....+. |+|+.+++.+.++|++
T Consensus 224 ---------------l~mA~~Ia~KSpvaVqgTK~~L~ysrehsv~~sLnyvatwNms~L~---s~Dl~~av~a~m~k~k 285 (292)
T KOG1681|consen 224 ---------------LPMAELIASKSPVAVQGTKENLLYSREHSVEESLNYVATWNMSMLL---SDDLVKAVMAQMEKLK 285 (292)
T ss_pred ---------------HHHHHHhccCCceeeechHHHHHHHhhhhhhhhHHHHHHHHHHHHH---HHHHHHHHHHHhhcCC
Confidence 1358999999999999999999999999999999988777766665 9999999999998764
No 79
>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.
Probab=100.00 E-value=5.1e-46 Score=369.11 Aligned_cols=270 Identities=19% Similarity=0.222 Sum_probs=213.3
Q ss_pred CEEecCC-CCCCCCCHHHHHHHHHHHHHhhcCCCceEEEE-EeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHH
Q 021410 1 MAILNRP-SALNALNTNMGAKLNKLFKAWENDPNIGFVSM-KGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI 78 (312)
Q Consensus 1 ~itln~p-~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl-~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (312)
+|||||| ++.|++|.+|+.+|.++++.++.|+++|+||| +|.|++||+|+|++++... .+......+....+.++
T Consensus 13 ~itlnrp~~~~Nal~~~~~~eL~~~l~~~~~d~~vr~VVl~~g~g~~FcaG~Dl~~~~~~---~~~~~~~~~~~~~~~~~ 89 (699)
T TIGR02440 13 ILTIDVPGEKMNTLKAEFADQVSEILSQLKRDKSIRGLVLVSGKPDNFIAGADISMLAAC---QTAGEAKALAQQGQVLF 89 (699)
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCceeeccCchhhhcc---CChhHHHHHHHHHHHHH
Confidence 5899999 69999999999999999999999999999986 6788999999999987531 11223334455566788
Q ss_pred HHHhhCCCcEEEEEccceecccceeecCCCeEEEeCc--eeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCC
Q 021410 79 YLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK--TVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKL 155 (312)
Q Consensus 79 ~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~--a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i 155 (312)
..+.++||||||+|||+|+|||++|+++||+|||+++ ++|++||+++|++|++|++++|+|++|.. +++|++||+.+
T Consensus 90 ~~l~~~~kPvIAaVnG~a~GgG~~LaLacD~ria~~~~~a~fg~pev~lGl~p~~g~~~~L~r~vG~~~A~~llltG~~~ 169 (699)
T TIGR02440 90 AELEALPIPVVAAIHGACLGGGLELALACHSRVCSDDDKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMILTGKQL 169 (699)
T ss_pred HHHHhCCCCEEEEECCEeecHHHHHHHhCCEEEEcCCCCcEEechhhcccCCCCccHHHHHHHhcCHHHHHHHHHcCCcC
Confidence 8899999999999999999999999999999999986 79999999999999999999999999999 99999999999
Q ss_pred CHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcC--CCCHHHHHHH
Q 021410 156 NGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFG--LDTVEEIIDS 233 (312)
Q Consensus 156 ~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 233 (312)
+|+||+++||||+++|++++.+.+.++++.....++ +. .. .....+ ......+.
T Consensus 170 ~a~eA~~~GLV~~vv~~~~l~~~a~~~A~~~~~~~~--------------~~--~~------~~~~~~~~~~a~~~~~-- 225 (699)
T TIGR02440 170 RAKQALKLGLVDDVVPQSILLDTAVEMALKGKPIRK--------------PL--SL------QERLLEGTPLGRALLF-- 225 (699)
T ss_pred CHHHHHhCCCCcEecChhHHHHHHHHHHHhCCCCCC--------------Cc--cc------hhhhcccCchhHHHHH--
Confidence 999999999999999998887766666431000000 00 00 000000 00001111
Q ss_pred HHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccC
Q 021410 234 LESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNK 310 (312)
Q Consensus 234 l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r 310 (312)
+++.+.+++-.+..-.|...+|++++.+...+++++++.|.+.+..++. |+|+++++++|+.++
T Consensus 226 ----------~~~~k~~~~~~~~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~---s~~~~~~~~~f~~~~ 289 (699)
T TIGR02440 226 ----------DQAAKKTAKKTQGNYPAAERILDVVRQGLAQGMQKGLDAEARAFGELVM---TPESAALRSIFFATT 289 (699)
T ss_pred ----------HHHHHHHHHhcccCChhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHH
Confidence 1112223333444567888899999999999999999999999999998 999999999998754
No 80
>PRK08272 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.4e-46 Score=337.67 Aligned_cols=203 Identities=21% Similarity=0.273 Sum_probs=172.1
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccC--C---------------
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG--K--------------- 63 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~--~--------------- 63 (312)
+||||||++.|++|.+|+.+|.+++++++.|+++|+|||+|.|++||+|+|++++....... .
T Consensus 22 ~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vrvvVl~G~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (302)
T PRK08272 22 RITLNRPEKGNAITADTPLELRAAVERADLDPGVHVILVSGAGKGFCAGYDLSAYAEGSSSGGGGGAYPGKRQAVNHLPD 101 (302)
T ss_pred EEEecCccccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEcCCCCcccCcCHHHHhhccccccccccccccccccccccc
Confidence 58999999999999999999999999999999999999999999999999999875432100 0
Q ss_pred --hHHH--HHHHHHHHHHHHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhh
Q 021410 64 --LEEC--KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH 139 (312)
Q Consensus 64 --~~~~--~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r 139 (312)
.... ..+....++++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|.+|+. ..+++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~~ias~~a~f~~pe~~~gg~~~~---~~~~~ 178 (302)
T PRK08272 102 DPWDPMIDYQMMSRFVRGFMSLWHAHKPTVAKVHGYCVAGGTDIALHCDQVIAADDAKIGYPPTRVWGVPAT---GMWAY 178 (302)
T ss_pred ccccchhhHHHHHHHHHHHHHHHhCCCCEEEEEccEeehhhHHHHHhCCEEEEeCCCEecCcchhcccCChH---HHHHH
Confidence 0000 1223445667788899999999999999999999999999999999999999999998666643 34678
Q ss_pred cChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHH
Q 021410 140 LPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIV 218 (312)
Q Consensus 140 ~~g~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (312)
++|.. +++|++||++|+|+||+++||||+++|++++.+.+.++
T Consensus 179 ~vG~~~A~~llltG~~i~a~eA~~~GLv~~vv~~~~l~~~a~~l------------------------------------ 222 (302)
T PRK08272 179 RLGPQRAKRLLFTGDCITGAQAAEWGLAVEAVPPEELDERTERL------------------------------------ 222 (302)
T ss_pred HhhHHHHHHHHHcCCccCHHHHHHcCCCceecCHHHHHHHHHHH------------------------------------
Confidence 89999 99999999999999999999999999988876544433
Q ss_pred HhhcCCCCHHHHHHHHHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhc
Q 021410 219 DKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRF 273 (312)
Q Consensus 219 ~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~ 273 (312)
+++|++.||.+++.+|++++....
T Consensus 223 -------------------------------a~~ia~~~~~a~~~~K~~l~~~~~ 246 (302)
T PRK08272 223 -------------------------------VERIAAVPVNQLAMVKLAVNSALL 246 (302)
T ss_pred -------------------------------HHHHHcCCHHHHHHHHHHHHHHHH
Confidence 788888999999999999987654
No 81
>PRK06213 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.6e-46 Score=325.90 Aligned_cols=212 Identities=16% Similarity=0.136 Sum_probs=186.9
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||+ .|++|.+|+.+|.++++.++ +++++||++|.|++||+|+|++++... .+....+.....+++..
T Consensus 15 ~itln~~~-~Nal~~~~~~~l~~~l~~~~--~~~~vvvl~g~g~~F~~G~Dl~~~~~~-----~~~~~~~~~~~~~l~~~ 86 (229)
T PRK06213 15 TITLDDGK-VNALSPAMIDALNAALDQAE--DDRAVVVITGQPGIFSGGFDLKVMTSG-----AQAAIALLTAGSTLARR 86 (229)
T ss_pred EEEeCCCC-CCCCCHHHHHHHHHHHHHhh--ccCcEEEEeCCCCceEcCcCHHHHhcc-----hHhHHHHHHHHHHHHHH
Confidence 58999985 69999999999999999998 457999999999999999999987531 22233455666778888
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCc-eeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK-TVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA 158 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~-a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~ 158 (312)
+.++||||||+|||+|+|||++|+++||+|||+++ ++|++||+++|++|++|++.++++++|.. +++++++|++++|+
T Consensus 87 l~~~~kPvIAav~G~a~GgG~~lal~~D~rva~~~~a~f~~pe~~~Gl~~~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ 166 (229)
T PRK06213 87 LLSHPKPVIVACTGHAIAKGAFLLLSADYRIGVHGPFKIGLNEVAIGMTMPHAAIELARDRLTPSAFQRAVINAEMFDPE 166 (229)
T ss_pred HHcCCCCEEEEEcCeeeHHHHHHHHhCCeeeEecCCcEEECchhhhCCcCChHHHHHHHHHcCHHHHHHHHHcCcccCHH
Confidence 99999999999999999999999999999999999 99999999999998888888899999998 99999999999999
Q ss_pred HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410 159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA 238 (312)
Q Consensus 159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 238 (312)
||+++||||+|+|++++.+.+.
T Consensus 167 eA~~~Glv~~vv~~~~l~~~a~---------------------------------------------------------- 188 (229)
T PRK06213 167 EAVAAGFLDEVVPPEQLLARAQ---------------------------------------------------------- 188 (229)
T ss_pred HHHHCCCceeccChHHHHHHHH----------------------------------------------------------
Confidence 9999999999999887764443
Q ss_pred CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHH
Q 021410 239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMS 287 (312)
Q Consensus 239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~ 287 (312)
+.++++++.||.+++.+|++++......+.+.++.|.+.+
T Consensus 189 ---------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~~~~~~ 228 (229)
T PRK06213 189 ---------AAARELAGLNMGAHAATKLKVRAAALEAIRAAIEGDAAEF 228 (229)
T ss_pred ---------HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhchhhhhhhc
Confidence 3378999999999999999999887788888888887653
No 82
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=100.00 E-value=6.1e-46 Score=369.40 Aligned_cols=270 Identities=18% Similarity=0.221 Sum_probs=212.1
Q ss_pred CEEecCC-CCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHH
Q 021410 1 MAILNRP-SALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI 78 (312)
Q Consensus 1 ~itln~p-~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (312)
+|||||| ++.|++|.+|+.+|.+++++++.|+++|+|||+|.+ ++||+|+|++++.... ..+....+....+.++
T Consensus 18 ~itlnrp~~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~~~~~~~F~aG~Dl~~~~~~~---~~~~~~~~~~~~~~~~ 94 (708)
T PRK11154 18 VITIDVPGEKMNTLKAEFAEQVRAILKQLREDKELKGVVFISGKPDNFIAGADINMLAACK---TAQEAEALARQGQQLF 94 (708)
T ss_pred EEEECCCCCCCcCCCHHHHHHHHHHHHHHHhCCCceEEEEecCCCCCcccCcChHHhhccC---CHHHHHHHHHHHHHHH
Confidence 5899999 689999999999999999999999999999999975 8999999999875321 1222333445556788
Q ss_pred HHHhhCCCcEEEEEccceecccceeecCCCeEEEeCc--eeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCC
Q 021410 79 YLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK--TVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKL 155 (312)
Q Consensus 79 ~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~--a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i 155 (312)
..+.++||||||+|||+|+|||++|+++||+|||+++ ++|++||+++|++|++|++++|++++|.. +++|++||+++
T Consensus 95 ~~i~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~a~fg~pe~~lGl~p~~gg~~~L~r~vG~~~A~~llltG~~i 174 (708)
T PRK11154 95 AEIEALPIPVVAAIHGACLGGGLELALACHYRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMILTGKQL 174 (708)
T ss_pred HHHHhCCCCEEEEECCeeechHHHHHHhCCEEEEeCCCCceEeCccccCCCCCCccHHhHHHhhcCHHHHHHHHHhCCcC
Confidence 8999999999999999999999999999999999996 59999999999999999999999999999 99999999999
Q ss_pred CHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCC--CHHHHHHH
Q 021410 156 NGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD--TVEEIIDS 233 (312)
Q Consensus 156 ~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 233 (312)
+|+||+++||||+++|++++.+.+.++++.....+..+. +.. ...+.+ ......
T Consensus 175 ~a~eA~~~GLv~~vv~~~~l~~~a~~~A~~~~~~~~~~~--~~~--------------------~~~~~~p~~~~~~~-- 230 (708)
T PRK11154 175 RAKQALKLGLVDDVVPHSILLEVAVELAKKGKPARRPLP--VRE--------------------RLLEGNPLGRALLF-- 230 (708)
T ss_pred CHHHHHHCCCCcEecChHHHHHHHHHHHHhcCCccCcCC--chh--------------------hhcccCchhHHHHH--
Confidence 999999999999999998887666665322100000000 000 000000 000111
Q ss_pred HHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccC
Q 021410 234 LESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNK 310 (312)
Q Consensus 234 l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r 310 (312)
+.+.+.+++-.+..-.|+..+|++++.+...+++++++.|.+.+..++. |+|++|++++|+.+|
T Consensus 231 ----------~~~~~~~~~~~~g~~~A~~~~k~~i~~~~~~~~~~~l~~E~~~~~~~~~---s~~~~~~~~aF~~~~ 294 (708)
T PRK11154 231 ----------KQARKKTLAKTQGNYPAPERILDVVRTGLEKGMSSGYEAEARAFGELAM---TPESAALRSIFFATT 294 (708)
T ss_pred ----------HHHHHHHHHhcccCChHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHH
Confidence 1111122222333446999999999999889999999999999999998 999999999999765
No 83
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=100.00 E-value=7e-45 Score=361.07 Aligned_cols=277 Identities=16% Similarity=0.218 Sum_probs=213.5
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+||||||++.|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++..... .+......+....+.++..
T Consensus 19 ~Itlnrp~~~Nal~~~~~~eL~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 97 (714)
T TIGR02437 19 ELKFDAPGSVNKFDRATLASLDQALDAIKAQSSLKGVILTSGKDAFIVGADITEFLGLFA-LPDAELIQWLLFANSIFNK 97 (714)
T ss_pred EEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCccccCcCHHHHhhccc-CCHHHHHHHHHHHHHHHHH
Confidence 589999999999999999999999999999999999999999999999999998853211 1122333455556778889
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE 159 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e 159 (312)
+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. +.+|++||++++|+|
T Consensus 98 i~~~pkPvIAai~G~alGGGleLalacD~ria~~~a~fglPEv~lGl~Pg~Ggt~rL~rliG~~~A~~llltG~~~~A~e 177 (714)
T TIGR02437 98 LEDLPVPTVAAINGIALGGGCECVLATDFRIADDTAKIGLPETKLGIMPGFGGTVRLPRVIGADNALEWIASGKENRAED 177 (714)
T ss_pred HHhCCCCEEEEECCeeecHHHHHHHhCCEEEEeCCCEEecchhhcCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred HHHcCccceecCCCChhHHHHHHhhh-hcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410 160 MMACGLATHYSVSEKLPLIEEELGKL-VTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA 238 (312)
Q Consensus 160 A~~~Glv~~vv~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 238 (312)
|+++||||+++|++++.+.+.++++. ....+. .. .... +...... ...+.+++..
T Consensus 178 A~~~GLvd~vv~~~~l~~~a~~~a~~~~~~~~~-~~------~~~~-~~~~~~~--~~~~~~~~~~-------------- 233 (714)
T TIGR02437 178 ALKVGAVDAVVTADKLGAAALQLLKDAINGKLD-WK------AKRQ-PKLEPLK--LSKIEAMMSF-------------- 233 (714)
T ss_pred HHHCCCCcEeeChhHHHHHHHHHHHHHhhcCCc-cc------ccCC-CCccccc--ccchHHHHHH--------------
Confidence 99999999999988887666655322 111000 00 0000 0000000 0000111100
Q ss_pred CCCCchHHHH-HHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 239 SLINDPWCGS-TLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 239 ~~~~~~~a~~-~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
+++.+ ..++-..+.| +...+.+.+..+...+++++++.|.+.|.+++. |++.+..++.|+.+|.
T Consensus 234 -----~~~~~~~~~~~~~~~p-ap~~~~~~v~~~~~~~~~~gl~~E~~~f~~l~~---s~~a~~l~~~ff~~r~ 298 (714)
T TIGR02437 234 -----TTAKGMVAQVAGPHYP-APMTAVKTIEKAARFGRDKALEIEAKGFVKLAK---TSEAKALIGLFLNDQY 298 (714)
T ss_pred -----HHHHHHHHHhhcCCCC-CHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHhhhHh
Confidence 11122 2233334444 444466788888888999999999999999998 9999999999998764
No 84
>KOG0016 consensus Enoyl-CoA hydratase/isomerase [Lipid transport and metabolism]
Probab=100.00 E-value=8.6e-44 Score=300.50 Aligned_cols=241 Identities=22% Similarity=0.290 Sum_probs=215.5
Q ss_pred CEEec-CCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHH---HHHHHHHHHH
Q 021410 1 MAILN-RPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE---CKDFFRTLYS 76 (312)
Q Consensus 1 ~itln-~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~---~~~~~~~~~~ 76 (312)
.|.+| ||+|.|+++.+|+.++.++++.+..|+++..++++|.|++||+|.|++.+......+..+. ...+...+..
T Consensus 19 ~I~~~~~Pkk~Nal~~e~y~~i~~al~~a~~dds~~~tv~s~~G~~f~sG~Df~~~~~~~~~d~~~~~~~~~~~v~~~~~ 98 (266)
T KOG0016|consen 19 FIALNIRPKKKNALNREDYVYIQRALEEANDDDSVSITVLSSNGSYFCSGLDFSPFAKALDDDANEESDKASKFVKNVSC 98 (266)
T ss_pred EEEecCCCcccccccHHHHHHHHHHHHHhhcccceEEEEEecCccEEeeccccchhhhcCCCcccccchhhHHHHHHHHH
Confidence 37889 9999999999999999999999999999999999999999999999998875543222222 2223333445
Q ss_pred HHHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCC
Q 021410 77 FIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKL 155 (312)
Q Consensus 77 ~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i 155 (312)
+...+..+|||+||.|||+|+|.|+.+...||+++|+|+++|..|++++|..|++|+++.+|+++|.. |.+|++.|+++
T Consensus 99 ~v~~fi~f~Kplia~vNGPAIGlgasil~lcD~V~A~Dka~F~TPfa~lGq~PEG~Ss~t~p~imG~~~A~E~ll~~~kl 178 (266)
T KOG0016|consen 99 FVNTFINFPKPLVALVNGPAIGLGASILPLCDYVWASDKAWFQTPFAKLGQSPEGCSSVTLPKIMGSASANEMLLFGEKL 178 (266)
T ss_pred HHHHHhcCCCCEEEEecCCccchhhHHhhhhheEEeccceEEeccchhcCCCCCcceeeeehHhhchhhHHHHHHhCCcc
Confidence 77888899999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred CHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHH
Q 021410 156 NGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLE 235 (312)
Q Consensus 156 ~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 235 (312)
+|+||.+.|||+++++++.+.+.+.
T Consensus 179 tA~Ea~~~glVskif~~~tf~~~v~------------------------------------------------------- 203 (266)
T KOG0016|consen 179 TAQEACEKGLVSKIFPAETFNEEVL------------------------------------------------------- 203 (266)
T ss_pred cHHHHHhcCchhhhcChHHHHHHHH-------------------------------------------------------
Confidence 9999999999999999987764322
Q ss_pred cccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 236 SEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 236 ~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
+.++++++.||.+++..|++++......+..+.+.|.+.....|. |+|+-+.+.+|+.+++
T Consensus 204 ------------~~ikq~s~l~p~sl~~~K~L~rs~~k~~l~~an~~E~~~l~~~W~---s~e~~~~~~~~~~~~~ 264 (266)
T KOG0016|consen 204 ------------KKIKQYSKLSPESLLGMKKLLRSNIKEELIKANEEECNVLLKQWV---SAECLARFKQYLSKKR 264 (266)
T ss_pred ------------HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhcc---ChHHHHHHHHHhcccc
Confidence 237889999999999999999999999999999999999999998 9999999999998875
No 85
>PLN02267 enoyl-CoA hydratase/isomerase family protein
Probab=100.00 E-value=4.1e-43 Score=307.02 Aligned_cols=177 Identities=16% Similarity=0.144 Sum_probs=149.0
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCce-EEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIG-FVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY 79 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~-~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (312)
+||||||++ |++|.+|+.+|.+++++++.|++++ +||++|.|++||+|+|++++... .........+...+++++.
T Consensus 12 ~i~Lnrp~~-Nal~~~~~~eL~~al~~~~~d~~~~~vVV~~g~g~~FsaG~Dl~~~~~~--~~~~~~~~~~~~~~~~~~~ 88 (239)
T PLN02267 12 ILTLTGDGE-HRLNPTLIDSIRSALRQVKSQATPGSVLITTAEGKFFSNGFDLAWAQAA--GSAPSRLHLMVAKLRPLVA 88 (239)
T ss_pred EEEeCCCCc-CcCCHHHHHHHHHHHHHHHhCCCCceEEEEcCCCCceeCCcCHHHHhcc--ccCHHHHHHHHHHHHHHHH
Confidence 589999985 9999999999999999999999865 88889999999999999986421 1112222334455667888
Q ss_pred HHhhCCCcEEEEEccceecccceeecCCCeEEEe-CceeEecCCCcccccCCCchHHHhhhcChHH-H-HHHHhcCCCCC
Q 021410 80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVAC-GKTVFATPETLIGFHPDAGASFYLSHLPGHL-G-EFLALTGAKLN 156 (312)
Q Consensus 80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~-~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a-~~l~ltg~~i~ 156 (312)
.+.++||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|+++++.++++++|.. + +++++||++++
T Consensus 89 ~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~~p~~~~~~l~~~vG~~~a~~~llltG~~~~ 168 (239)
T PLN02267 89 DLISLPMPTIAAVTGHASAAGFILALSHDYVLMRKDRGVLYMSEVDIGLPLPDYFMALLRAKIGSPAARRDVLLRAAKLT 168 (239)
T ss_pred HHhcCCCCEEEEECCcchHHHHHHHHHCCEEEecCCCCeEeccccccCCCCChHHHHHHHHHcChHHHHHHHHHcCCcCC
Confidence 8999999999999999999999999999999998 5689999999999974444578899999988 7 69999999999
Q ss_pred HHHHHHcCccceecCC-CChhHHHH
Q 021410 157 GAEMMACGLATHYSVS-EKLPLIEE 180 (312)
Q Consensus 157 a~eA~~~Glv~~vv~~-~~l~~~~~ 180 (312)
|+||+++||||+++|+ +++.+.+.
T Consensus 169 a~eA~~~Glv~~vv~~~~~l~~~a~ 193 (239)
T PLN02267 169 AEEAVEMGIVDSAHDSAEETVEAAV 193 (239)
T ss_pred HHHHHHCCCcceecCCHHHHHHHHH
Confidence 9999999999999985 45654333
No 86
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial. Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).
Probab=100.00 E-value=4e-43 Score=349.25 Aligned_cols=286 Identities=16% Similarity=0.160 Sum_probs=205.2
Q ss_pred CEEecCCC-CCCCCCHHHHHHHHHHHHHhhcCCCceEE-EEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHH
Q 021410 1 MAILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFV-SMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI 78 (312)
Q Consensus 1 ~itln~p~-~~Nal~~~~~~~L~~~l~~~~~d~~v~~v-vl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (312)
+||||||+ +.|++|.+|+.+|.++++.++.|+++|+| |++|.|++||+|+|++++... .+......+....++++
T Consensus 25 ~itlnrP~~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVvltg~g~~F~aG~Dl~~~~~~---~~~~~~~~~~~~~~~l~ 101 (737)
T TIGR02441 25 VVKIDSPNSKVNTLSKELFAEFKEVMNELWTNEAIKSAVLISGKPGSFVAGADIQMIAAC---KTAQEVTQLSQEGQEMF 101 (737)
T ss_pred EEEEcCCCCCCCCCCHHHHHHHHHHHHHHhhCCCCEEEEEEECCCCcceeCcCHHHHhcc---CChHHHHHHHHHHHHHH
Confidence 58999998 68999999999999999999999999965 579999999999999988531 12233445556667888
Q ss_pred HHHhhCCCcEEEEEccceecccceeecCCCeEEEeCc--eeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCC
Q 021410 79 YLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK--TVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKL 155 (312)
Q Consensus 79 ~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~--a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i 155 (312)
..+.++||||||+|||+|+|||++|+++||+|||+++ ++|++||+++|++|++|++++|+|++|.. +.+|++||+++
T Consensus 102 ~~i~~~~kPvIAav~G~a~GgG~eLALacD~ria~~~a~a~fglpEv~lGl~Pg~Ggt~rLprliG~~~A~~l~ltG~~i 181 (737)
T TIGR02441 102 ERIEKSQKPIVAAISGSCLGGGLELALACHYRIATKDRKTLLGLPEVMLGLLPGAGGTQRLPKLTGVPAALDMMLTGKKI 181 (737)
T ss_pred HHHHhCCCCEEEEECCEeecHHHHHHHhCCEEEEcCCCCCeEecchhhhCCCCCccHhhhHHHhhCHHHHHHHHHcCCcC
Confidence 8999999999999999999999999999999999997 58999999999999999999999999998 99999999999
Q ss_pred CHHHHHHcCccceecCC--CC---hhHH-HHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCC-CCHH
Q 021410 156 NGAEMMACGLATHYSVS--EK---LPLI-EEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGL-DTVE 228 (312)
Q Consensus 156 ~a~eA~~~Glv~~vv~~--~~---l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 228 (312)
+|+||+++||||+|+|+ ++ +++. .+.+...+......+...+...++...... ... ....+. ....
T Consensus 182 ~a~eA~~~GLVd~vv~~~~~~~~~l~~~~~~~l~~~A~~~a~~l~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~~ 254 (737)
T TIGR02441 182 RADRAKKMGIVDQLVDPLGPGLKPAEENTIEYLEEVAVKFAQGLANGKLSINRDKGLVH-KIT------QYVMTNPFVRQ 254 (737)
T ss_pred CHHHHHHCCCCeEecCCcccccccchhhhHHHHHHHHHHHHHHhhcccCCccccccccC-ccc------hhhcccchhHH
Confidence 99999999999999986 21 2111 111111111111111110100000000000 000 000000 0011
Q ss_pred HHHHHHHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeec
Q 021410 229 EIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQIL 308 (312)
Q Consensus 229 ~~~~~l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~ 308 (312)
.+++.. ..+..++ .+....+...+.+.+..+...+++++++.|.+.|.+++. |++.+.-++.|+.
T Consensus 255 ~~~~~~-----------~~~~~~~-~~g~~~Ap~~~l~~v~~~~~~~~~~gl~~E~~~f~~l~~---s~~a~al~~~f~~ 319 (737)
T TIGR02441 255 QVYKTA-----------EDKVMKQ-TKGLYPAPLKILDVVRTGYDQGPDAGYEAESKAFGELSM---TFESKALIGLFHG 319 (737)
T ss_pred HHHHHH-----------HHHHHHh-ccCCCccHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHH
Confidence 111111 1112223 333234455577788888888999999999999999998 9999999999987
Q ss_pred cCC
Q 021410 309 NKH 311 (312)
Q Consensus 309 ~r~ 311 (312)
+|.
T Consensus 320 ~~~ 322 (737)
T TIGR02441 320 QTD 322 (737)
T ss_pred HHH
Confidence 653
No 87
>KOG1682 consensus Enoyl-CoA isomerase [Lipid transport and metabolism]
Probab=100.00 E-value=7.4e-41 Score=271.99 Aligned_cols=236 Identities=19% Similarity=0.221 Sum_probs=208.6
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHH
Q 021410 2 AILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLL 81 (312)
Q Consensus 2 itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 81 (312)
|+||+|+|.|.++.+|+.+|.+.+....++.++|+|||+..|+.||+|.||+++.+. ...+.....++...+++..|
T Consensus 45 i~l~npKk~NtLSLaM~~~Lq~~ll~d~d~~dlr~viita~GkifSaGH~LKELt~e---~g~d~haevFqtc~dvmn~I 121 (287)
T KOG1682|consen 45 ITLNNPKKLNTLSLAMMCALQDALLKDKDNLDLRCVIITAQGKIFSAGHNLKELTNE---PGSDIHAEVFQTCTDVMNDI 121 (287)
T ss_pred eeecCccccchhhHHHHHHHHHHHhhcccccceeEEEEecCCccccccccHHHhhcC---ccchHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999888899999999999999999999998753 22344456778888999999
Q ss_pred hhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHHH
Q 021410 82 GTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAEM 160 (312)
Q Consensus 82 ~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~eA 160 (312)
.++|+|||+-|||++..+||.|...||+++|+++++|..|..++|++...-+.. +.|.+++. +.+|++||.+|+++||
T Consensus 122 rn~pVPVia~VNG~AaAAGcQLVaSCD~vVa~k~SkF~tPG~~vGlFCSTPGvA-laRavpRkva~~ML~Tg~Pi~~eeA 200 (287)
T KOG1682|consen 122 RNLPVPVIAKVNGYAAAAGCQLVASCDMVVATKNSKFSTPGAGVGLFCSTPGVA-LARAVPRKVAAYMLMTGLPITGEEA 200 (287)
T ss_pred hcCCCceEEEecchhhhccceEEEeeeEEEEecCccccCCCCceeeEecCcchh-HhhhcchhHHHHHHHhCCCCchHHH
Confidence 999999999999999999999999999999999999999999999976554333 78999988 9999999999999999
Q ss_pred HHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccCC
Q 021410 161 MACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASL 240 (312)
Q Consensus 161 ~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 240 (312)
+..|||+++||+++++...+.+
T Consensus 201 l~sGlvskvVp~~el~~e~~~i---------------------------------------------------------- 222 (287)
T KOG1682|consen 201 LISGLVSKVVPAEELDKEIEEI---------------------------------------------------------- 222 (287)
T ss_pred HHhhhhhhcCCHHHHHHHHHHH----------------------------------------------------------
Confidence 9999999999999987544433
Q ss_pred CCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 241 INDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 241 ~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
.++|...|...+.+-|+.+......+-.+++..-.+....-+. -.|++|||.+|++||-
T Consensus 223 ---------~~~i~~~srav~slgk~f~y~q~~ms~~ea~~~~~~~m~~n~q---l~d~kegiasf~~krp 281 (287)
T KOG1682|consen 223 ---------TNAIKAKSRAVISLGKEFYYKQLAMSQAEAFSAAQEKMCENFQ---LGDTKEGIASFFEKRP 281 (287)
T ss_pred ---------HHHHhhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhccc---ccchHHHHHHHhccCC
Confidence 6778888888888899988877777888888888888777776 7999999999999983
No 88
>cd06558 crotonase-like Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole.
Probab=100.00 E-value=3e-40 Score=281.14 Aligned_cols=180 Identities=32% Similarity=0.517 Sum_probs=164.8
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
+|+||+|++.|++|.+|+.+|.++++.++.|+++++|||||.|+.||+|+|++++...... .+....+...++.++..
T Consensus 11 ~i~l~~~~~~N~~~~~~~~~l~~~l~~~~~d~~~~~vvl~~~~~~Fs~G~dl~~~~~~~~~--~~~~~~~~~~~~~~~~~ 88 (195)
T cd06558 11 TITLNRPEKRNALSLEMLDELAAALDEAEADPDVRVVVLTGAGKAFCAGADLKELAALSDA--GEEARAFIRELQELLRA 88 (195)
T ss_pred EEEECCccccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceEeCcCHHHHhccccc--chhHHHHHHHHHHHHHH
Confidence 4899999999999999999999999999999999999999999999999999998754211 11355677888899999
Q ss_pred HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE 159 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e 159 (312)
+..+|||+||+|||+|+|+|++++++||+||++++++|++||+++|++|++|+++++++++|.. +.+++++|+.++++|
T Consensus 89 i~~~~~p~Ia~v~G~a~g~G~~la~~~D~~i~~~~~~~~~pe~~~G~~p~~g~~~~l~~~~g~~~a~~~~l~g~~~~a~e 168 (195)
T cd06558 89 LLRLPKPVIAAVNGAALGGGLELALACDIRIAAEDAKFGLPEVKLGLVPGGGGTQRLPRLVGPARARELLLTGRRISAEE 168 (195)
T ss_pred HHcCCCCEEEEECCeeecHHHHHHHhCCEEEecCCCEEechhhhcCCCCCCcHHHHHHHHhCHHHHHHHHHcCCccCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999988 999999999999999
Q ss_pred HHHcCccceecCCCChhHHHHHH
Q 021410 160 MMACGLATHYSVSEKLPLIEEEL 182 (312)
Q Consensus 160 A~~~Glv~~vv~~~~l~~~~~~~ 182 (312)
|+++|||+++++.+++.+.+..+
T Consensus 169 a~~~Glv~~~~~~~~l~~~a~~~ 191 (195)
T cd06558 169 ALELGLVDEVVPDEELLAAALEL 191 (195)
T ss_pred HHHcCCCCeecChhHHHHHHHHH
Confidence 99999999999987776555544
No 89
>COG0447 MenB Dihydroxynaphthoic acid synthase [Coenzyme metabolism]
Probab=100.00 E-value=6.7e-41 Score=274.69 Aligned_cols=237 Identities=19% Similarity=0.295 Sum_probs=190.1
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeC--C-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHH
Q 021410 2 AILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGS--G-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI 78 (312)
Q Consensus 2 itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~--g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (312)
||||||+++|++.+..+.||.+++..+..|++|.+|||||. | ++||+|+|-+--.....-.+.+.... -...++.
T Consensus 32 ItinRPevrNAfrP~TV~Em~~Af~~Ar~d~~vGvi~lTG~~~G~~AFCsGGDQ~vRg~~~gY~~d~~~~r--LnvLdlQ 109 (282)
T COG0447 32 ITINRPEVRNAFRPKTVDEMIDAFADARDDPNVGVILLTGNGDGDKAFCSGGDQKVRGDSGGYVDDDGIPR--LNVLDLQ 109 (282)
T ss_pred EEecChhhhccCCCccHHHHHHHHHhhhcCCCccEEEEecCCCCCeeeecCCCceecccCCCccCCccCcc--cchhhHH
Confidence 89999999999999999999999999999999999999985 5 89999999764321100001111111 1123556
Q ss_pred HHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCH
Q 021410 79 YLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNG 157 (312)
Q Consensus 79 ~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a 157 (312)
+.|..+||||||.|+|+++|||-.|-+.||+.||+++++|+..-.++|-+-++.++.+|.|++|.. |+++.+.++.++|
T Consensus 110 rlIR~~PKpViA~V~G~AiGGGhvlhvvCDLTiAa~nA~FgQTgp~VGSFD~G~Gs~ylar~VGqKkArEIwfLcR~Y~A 189 (282)
T COG0447 110 RLIRTMPKPVIAMVAGYAIGGGHVLHVVCDLTIAADNAIFGQTGPKVGSFDGGYGSSYLARIVGQKKAREIWFLCRQYDA 189 (282)
T ss_pred HHHHhCCcceEEEEeeEeccCccEEEEEeeeeeehhcchhcCCCCCcccccCcccHHHHHHHhhhhhhHHhhhhhhhccH
Confidence 678899999999999999999999999999999999999999999999987777777899999999 9999999999999
Q ss_pred HHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcc
Q 021410 158 AEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESE 237 (312)
Q Consensus 158 ~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 237 (312)
+||+++|+||.|||.++|++....
T Consensus 190 ~eal~MGlVN~Vvp~~~LE~e~v~-------------------------------------------------------- 213 (282)
T COG0447 190 EEALDMGLVNTVVPHADLEKETVQ-------------------------------------------------------- 213 (282)
T ss_pred HHHHhcCceeeeccHHHHHHHHHH--------------------------------------------------------
Confidence 999999999999999998754433
Q ss_pred cCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410 238 ASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH 311 (312)
Q Consensus 238 ~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~ 311 (312)
| ++.|..+||.+++..|-.++.... ++ .++. |+..-..++. ..+++.+||-.||++||+
T Consensus 214 -------W----~~E~l~kSP~AlR~LK~Afnad~D-Gl-aG~q-~~ag~at~L~-YmTdEa~EGr~AF~eKR~ 272 (282)
T COG0447 214 -------W----AREMLAKSPTALRMLKAAFNADCD-GL-AGLQ-ELAGNATLLY-YMTDEAQEGRDAFLEKRK 272 (282)
T ss_pred -------H----HHHHHhcChHHHHHHHHHhcCCCc-hh-hHHH-HhcccceEEE-EechhhhhhHHHHhhccC
Confidence 3 688889999999999988874322 11 1211 2222222221 238999999999999996
No 90
>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH.
Probab=100.00 E-value=3.2e-39 Score=308.84 Aligned_cols=181 Identities=15% Similarity=0.193 Sum_probs=152.6
Q ss_pred CEEecCCC----------CCCCCCHHHHHHHHHHHHHhh-cCCCceEEEEEeC-CCceeccCCchhHHHhhccCChHHHH
Q 021410 1 MAILNRPS----------ALNALNTNMGAKLNKLFKAWE-NDPNIGFVSMKGS-GRAFCAGGDIVSLYHFMNQGKLEECK 68 (312)
Q Consensus 1 ~itln~p~----------~~Nal~~~~~~~L~~~l~~~~-~d~~v~~vvl~g~-g~~F~aG~Dl~~~~~~~~~~~~~~~~ 68 (312)
+||||||+ |+|++|.+|+.+|.++++.++ .|+++|+|||||. |++||+|+|++++..... .......
T Consensus 23 ~ItLnrpe~~~~~p~~~~k~Nal~~~~l~eL~~al~~~~~~d~~vRvVVLtg~~Gk~FcaG~DL~~~~~~~~-~~~~~~~ 101 (546)
T TIGR03222 23 TLTMDVDEDGGLRPGYKLKLNSYDLGVDIELHDAVQRIRFEHPEVRTVVMTSGKDRVFCSGANIFMLGLSTH-AWKVNFC 101 (546)
T ss_pred EEEEecccccccCccccccCCCCCHHHHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcCCcCHHHHhcccc-chhhhHH
Confidence 58999976 899999999999999999999 7899999999997 589999999998743210 0011111
Q ss_pred HHH-HHHHHHHHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCc--eeEecCCCc-ccccCCCchHHHhh--hcCh
Q 021410 69 DFF-RTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK--TVFATPETL-IGFHPDAGASFYLS--HLPG 142 (312)
Q Consensus 69 ~~~-~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~--a~f~~pe~~-~G~~p~~g~~~~l~--r~~g 142 (312)
.+. .....+...+.++||||||+|||+|+|||++|+++||+||++++ ++|++||++ +|++|++|++.+++ +.+|
T Consensus 102 ~~~~~~~~~i~~~i~~~pkPvIAAVnG~a~GGG~~LALacD~rvAs~~a~a~f~~pEv~~lGl~P~~gg~~~l~~~~~vg 181 (546)
T TIGR03222 102 KFTNETRNGIEDSSRHSGLKFLAAVNGTCAGGGYELALACDEIMLVDDRSSSVSLPEVPLLGVLPGTGGLTRVTDKRRVR 181 (546)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEEecCCCcEEEccchhccCcCCccchhhhccccchhC
Confidence 111 11223455677899999999999999999999999999999996 799999997 99999999998887 6889
Q ss_pred HH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHH
Q 021410 143 HL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL 182 (312)
Q Consensus 143 ~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~ 182 (312)
.. +++|++||+.|+|+||+++||||++||++++.+.+.++
T Consensus 182 ~~~A~~llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~l 222 (546)
T TIGR03222 182 RDHADIFCTIEEGVRGKRAKEWRLVDEVVKPSQFDAAIAER 222 (546)
T ss_pred HHHHHHHHHcCCCccHHHHHHcCCceEEeChHHHHHHHHHH
Confidence 98 99999999999999999999999999998887766665
No 91
>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional
Probab=100.00 E-value=2.6e-38 Score=303.60 Aligned_cols=186 Identities=16% Similarity=0.205 Sum_probs=153.1
Q ss_pred CEEecCC-------C---CCCCCCHHHHHHHHHHHHHhh-cCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHH
Q 021410 1 MAILNRP-------S---ALNALNTNMGAKLNKLFKAWE-NDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECK 68 (312)
Q Consensus 1 ~itln~p-------~---~~Nal~~~~~~~L~~~l~~~~-~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~ 68 (312)
+|||||| + +.|++|.+|+.+|.+++++++ .|+++|+|||||.+ ++||+|+|++++...... ......
T Consensus 27 ~ItLnrpe~~~~rP~~~~~~Nal~~~m~~eL~~al~~~~~~d~~vrvVVLtg~ggk~FcaG~DL~~~~~~~~~-~~~~~~ 105 (550)
T PRK08184 27 TLTMDVDEDGGLRPGYKLKLNSYDLGVDIELHDALQRIRFEHPEVRTVVVTSAKDRVFCSGANIFMLGGSSHA-WKVNFC 105 (550)
T ss_pred EEEEcCccccccCcccccCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCccCHHhHhccccc-hhhhHH
Confidence 5899965 4 899999999999999999999 78999999999985 899999999987432110 000111
Q ss_pred HHHHH-HHHHHHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCc--eeEecCCCc-ccccCCCchHHHhh--hcCh
Q 021410 69 DFFRT-LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK--TVFATPETL-IGFHPDAGASFYLS--HLPG 142 (312)
Q Consensus 69 ~~~~~-~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~--a~f~~pe~~-~G~~p~~g~~~~l~--r~~g 142 (312)
.+... ...+...+.++||||||+|||+|+|||++|+++|||||++++ ++|++||++ +|++|++|++++++ +++|
T Consensus 106 ~~~~~~~~~l~~~l~~~pkPvIAAVnG~a~GGG~~LALacD~rIas~~~~a~fg~pEv~~~Gl~P~~gg~~rl~~~~~vg 185 (550)
T PRK08184 106 KFTNETRNGIEDSSRHSGLKFIAAVNGTCAGGGYELALACDEIVLVDDRSSAVSLPEVPLLGVLPGTGGLTRVTDKRKVR 185 (550)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEEecCCCcEEEccchhccccCCCcchHHHhhhhhhcC
Confidence 11111 122445677899999999999999999999999999999987 899999997 99999999999998 7799
Q ss_pred HH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHH-hhhhc
Q 021410 143 HL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVT 187 (312)
Q Consensus 143 ~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~-~~~~~ 187 (312)
.. +.+|++||+.++|+||+++||||+++|++++.+.+.++ .+++.
T Consensus 186 ~~~A~~llltG~~i~AeeA~~~GLVd~vv~~d~l~~~a~~~A~~ia~ 232 (550)
T PRK08184 186 RDLADIFCTIEEGVRGKRAVDWRLVDEVVKPSKFDAKVAERAAELAA 232 (550)
T ss_pred HHHHHHHHHhCCcccHHHHHHcCCccEeeCHHHHHHHHHHHHHHHHh
Confidence 98 99999999999999999999999999998887665555 33433
No 92
>cd07014 S49_SppA Signal peptide peptidase A. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is an intramembrane enzyme found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be ClpP-like serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain, cleaving peptide bonds in the plane of the lipid bilayer. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal p
Probab=99.84 E-value=3.8e-21 Score=160.98 Aligned_cols=141 Identities=16% Similarity=0.105 Sum_probs=114.2
Q ss_pred HHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEccc
Q 021410 16 NMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGV 95 (312)
Q Consensus 16 ~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~ 95 (312)
-.+.+|.++++.++.|+++|+|||++ +|.|+|+.... .+.+++..+.+++|||||+++|.
T Consensus 22 ~~~~~l~~~l~~a~~d~~v~~vvl~~----~~~gg~~~~~~----------------~~~~~i~~~~~~~kpVia~v~G~ 81 (177)
T cd07014 22 VSGDTTAAQIRDARLDPKVKAIVLRV----NSPGGSVTASE----------------VIRAELAAARAAGKPVVASGGGN 81 (177)
T ss_pred cCHHHHHHHHHHHhcCCCceEEEEEe----eCCCcCHHHHH----------------HHHHHHHHHHhCCCCEEEEECCc
Confidence 35789999999999999999999997 68998876421 23345666778999999999999
Q ss_pred eecccceeecCCCeEEEeCceeEecCCCcccccCCCchHH--------HhhhcCh--HH-HHHHHhcCCCCCHHHHHHcC
Q 021410 96 TMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASF--------YLSHLPG--HL-GEFLALTGAKLNGAEMMACG 164 (312)
Q Consensus 96 a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~--------~l~r~~g--~~-a~~l~ltg~~i~a~eA~~~G 164 (312)
|.|+|+.|+++||+++++++++|+.+.+..+..+...... .+++..| .. ..+++..|..++|++|++.|
T Consensus 82 a~g~g~~la~a~D~i~a~~~a~~~~~G~~~~~~~~~~~l~~~~~~~~~~v~~~rg~~~~~~~~~l~~g~~~~a~~A~~~G 161 (177)
T cd07014 82 AASGGYWISTPANYIVANPSTLVGSIGIFGVQLADQLSIENGYKRFITLVADNRHSTPEQQIDKIAQGGVWTGQDAKANG 161 (177)
T ss_pred hhHHHHHHHHhCCEEEECCCCeEEEechHhhHHHHHHHHHHHHHHHHHHHHHhCCCCHHHhHHHhcCcCeEeHHHHHHcC
Confidence 9999999999999999999999999988776433222222 3444445 55 78888999999999999999
Q ss_pred ccceecCCCChh
Q 021410 165 LATHYSVSEKLP 176 (312)
Q Consensus 165 lv~~vv~~~~l~ 176 (312)
|||++.+.+++.
T Consensus 162 LVD~v~~~~e~~ 173 (177)
T cd07014 162 LVDSLGSFDDAV 173 (177)
T ss_pred CcccCCCHHHHH
Confidence 999999866553
No 93
>cd07020 Clp_protease_NfeD_1 Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially c
Probab=99.82 E-value=5.8e-20 Score=155.01 Aligned_cols=138 Identities=12% Similarity=0.075 Sum_probs=112.1
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEE
Q 021410 12 ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI 91 (312)
Q Consensus 12 al~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa 91 (312)
.++..+...+.+.++.+++++ ++.|+|.=. |.|+++..- ..++..|..+|||||++
T Consensus 9 ~I~~~~~~~l~~~l~~a~~~~-~~~vvl~In----SpGG~v~~~-------------------~~i~~~l~~~~kPvia~ 64 (187)
T cd07020 9 AITPATADYLERAIDQAEEGG-ADALIIELD----TPGGLLDST-------------------REIVQAILASPVPVVVY 64 (187)
T ss_pred EEChHHHHHHHHHHHHHHhCC-CCEEEEEEE----CCCCCHHHH-------------------HHHHHHHHhCCCCEEEE
Confidence 366778889999999998765 788888633 566665421 13344566799999999
Q ss_pred Ec---cceecccceeecCCCeEEEeCceeEecCCCcccccCCC--------------chHHHhhhcChH--H-HHHHHhc
Q 021410 92 LN---GVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDA--------------GASFYLSHLPGH--L-GEFLALT 151 (312)
Q Consensus 92 v~---G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~--------------g~~~~l~r~~g~--~-a~~l~lt 151 (312)
|+ |+|.|||+.++++||+++++++++|+.+++..+..+.. +....+++..|. . +.+++++
T Consensus 65 v~~~~G~AasgG~~iala~D~iva~p~a~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~~~~~a~~~l~~ 144 (187)
T cd07020 65 VYPSGARAASAGTYILLAAHIAAMAPGTNIGAAHPVAIGGGGGSDPVMEKKILNDAVAYIRSLAELRGRNAEWAEKAVRE 144 (187)
T ss_pred EecCCCCchhHHHHHHHhCCceeECCCCcEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHc
Confidence 99 99999999999999999999999999999985554432 234567888886 4 8899999
Q ss_pred CCCCCHHHHHHcCccceecCCC
Q 021410 152 GAKLNGAEMMACGLATHYSVSE 173 (312)
Q Consensus 152 g~~i~a~eA~~~Glv~~vv~~~ 173 (312)
|+.++|+||+++||||+++++.
T Consensus 145 g~~~~a~eA~~~Glvd~v~~~~ 166 (187)
T cd07020 145 SLSLTAEEALKLGVIDLIAADL 166 (187)
T ss_pred CCeecHHHHHHcCCcccccCCH
Confidence 9999999999999999999875
No 94
>cd07019 S49_SppA_1 Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppAs in this subfamily are found in all three domains of life and are involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members, the E. coli SppA contains an amino-te
Probab=99.66 E-value=1.6e-16 Score=136.56 Aligned_cols=87 Identities=18% Similarity=0.244 Sum_probs=75.0
Q ss_pred CHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEc
Q 021410 14 NTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILN 93 (312)
Q Consensus 14 ~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~ 93 (312)
+..++.+|.++|+.+..||++++|||+ .||+|+|+..+. .+++.+..+..++|||||+++
T Consensus 19 ~~~~~~~l~~~l~~a~~d~~v~~ivL~----~~s~Gg~~~~~~----------------~~~~~l~~~~~~~kpVia~v~ 78 (211)
T cd07019 19 GNVGGDTTAAQIRDARLDPKVKAIVLR----VNSPGGSVTASE----------------VIRAELAAARAAGKPVVVSAG 78 (211)
T ss_pred CccCHHHHHHHHHHHhhCCCceEEEEE----EcCCCcCHHHHH----------------HHHHHHHHHHhCCCCEEEEEC
Confidence 455689999999999999999999998 699999997542 122345567788999999999
Q ss_pred cceecccceeecCCCeEEEeCceeEec
Q 021410 94 GVTMGGGAGVSIPGTFRVACGKTVFAT 120 (312)
Q Consensus 94 G~a~GgG~~lal~~D~~ia~~~a~f~~ 120 (312)
|.|.|+|+.|+++||+++++++++|+.
T Consensus 79 g~a~s~gy~la~~aD~i~a~~~a~~gs 105 (211)
T cd07019 79 GAAASGGYWISTPANYIVANPSTLTGS 105 (211)
T ss_pred CeehhHHHHHHHhCCEEEEcCCCEEEE
Confidence 999999999999999999999988863
No 95
>cd00394 Clp_protease_like Caseinolytic protease (ClpP) is an ATP-dependent protease. Clp protease (caseinolytic protease; ClpP; endopeptidase Clp; Peptidase S14; ATP-dependent protease, ClpAP)-like enzymes are highly conserved serine proteases and belong to the ClpP/Crotonase superfamily. Included in this family are Clp proteases that are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. The functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activity in the presence of ATP. Active site consists of the triad Ser, His and Asp, preferring hydrophobic or non-polar residues at P1 or P1' positions. The protease exists as a tetradec
Probab=99.61 E-value=3.3e-15 Score=123.15 Aligned_cols=134 Identities=14% Similarity=0.146 Sum_probs=103.7
Q ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 021410 13 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL 92 (312)
Q Consensus 13 l~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav 92 (312)
++..++.+|.+.|+.++.|++++.|+|.. .|.|+|+... ..+...+..++||||+.+
T Consensus 8 I~~~~~~~l~~~l~~a~~d~~~~~ivl~~----~s~Gg~~~~~-------------------~~i~~~l~~~~kpvva~~ 64 (161)
T cd00394 8 IEDVSADQLAAQIRFAEADNSVKAIVLEV----NTPGGRVDAG-------------------MNIVDALQASRKPVIAYV 64 (161)
T ss_pred EccchHHHHHHHHHHHHhCCCCceEEEEE----ECCCcCHHHH-------------------HHHHHHHHHhCCCEEEEE
Confidence 56688999999999999999999999987 4778876532 123445667889999999
Q ss_pred ccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchH------HH----hhhc---------ChHH-HHHHHhcC
Q 021410 93 NGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGAS------FY----LSHL---------PGHL-GEFLALTG 152 (312)
Q Consensus 93 ~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~------~~----l~r~---------~g~~-a~~l~ltg 152 (312)
+|.|.++|+.|+++||.|++.+++.|++..+..+.....+.. .. ..+. +... ..+++..|
T Consensus 65 ~g~~~s~g~~la~~~d~~~~~~~a~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~r~~~~~~~~~~~~~~ 144 (161)
T cd00394 65 GGQAASAGYYIATAANKIVMAPGTRVGSHGPIGGYGGNGNPTAQEADQRIILYFIARFISLVAENRGQTTEKLEEDIEKD 144 (161)
T ss_pred CChhHHHHHHHHhCCCEEEECCCCEEEEeeeEEecCCCCChHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHhcCC
Confidence 999999999999999999999999999998876654322000 01 1111 1222 45677789
Q ss_pred CCCCHHHHHHcCcccee
Q 021410 153 AKLNGAEMMACGLATHY 169 (312)
Q Consensus 153 ~~i~a~eA~~~Glv~~v 169 (312)
..++++||+++||||++
T Consensus 145 ~~~~a~eA~~~GLvD~i 161 (161)
T cd00394 145 LVLTAQEALEYGLVDAL 161 (161)
T ss_pred cEEcHHHHHHcCCcCcC
Confidence 99999999999999975
No 96
>PF13766 ECH_C: 2-enoyl-CoA Hydratase C-terminal region; PDB: 3JU1_A 3BPT_A.
Probab=99.59 E-value=2.8e-15 Score=116.36 Aligned_cols=92 Identities=39% Similarity=0.727 Sum_probs=82.1
Q ss_pred HHHHHHhhcCCCCHHHHHHHHHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhc
Q 021410 214 RIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSR 293 (312)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~ 293 (312)
....|++||+.+++++|++.|+.. ..+|+.++++.|.++||.|+++|.++++++...++.+++++|+++..+++.
T Consensus 5 ~~~~I~~~F~~~s~~eI~~~L~~~----~~~~a~~~~~~l~~~SP~Sl~vt~~~l~~~~~~sl~e~l~~E~~~a~~~~~- 79 (118)
T PF13766_consen 5 HLEAIDRCFSADSVEEIIEALEAD----GDEWAQKTLETLRSGSPLSLKVTFEQLRRGRNLSLAECLRMEYRLASRCMR- 79 (118)
T ss_dssp CHHHHHHHTTSSSHHHHHHHHHHH----S-HHHHHHHHHHCCS-HHHHHHHHHHHHCCTTS-HHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHhCCCCHHHHHHHHHcc----CcHHHHHHHHHHHHCCHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHhc-
Confidence 456799999999999999999983 779999999999999999999999999999999999999999999999998
Q ss_pred CCCCChhhhhheeeccCCC
Q 021410 294 LISGDFYEVSNFQILNKHV 312 (312)
Q Consensus 294 ~~~~d~~eg~~a~l~~r~~ 312 (312)
.+||.|||+|.|+||+.
T Consensus 80 --~~DF~EGVRA~LIDKd~ 96 (118)
T PF13766_consen 80 --HPDFAEGVRALLIDKDK 96 (118)
T ss_dssp --CSCHHHHHHHHTTS---
T ss_pred --cchHHHHHHHHHhcCCC
Confidence 89999999999999973
No 97
>cd07022 S49_Sppa_36K_type Signal peptide peptidase A (SppA) 36K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 36K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily are all bacterial and include sohB peptidase and protein C. These are sometimes referred to as 36K type since they contain only one domain, unlike E. coli SppA that also contains an amino-terminal domain. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases.
Probab=99.56 E-value=1.9e-14 Score=124.07 Aligned_cols=97 Identities=19% Similarity=0.159 Sum_probs=76.0
Q ss_pred ecCCCCCCC-CCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHh
Q 021410 4 LNRPSALNA-LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLG 82 (312)
Q Consensus 4 ln~p~~~Na-l~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 82 (312)
.++|...|+ ++..++.+|.++++.++.|+++++|||+. +|.|+++... ..+.+.+..+.
T Consensus 12 ~~~~~~~~~~~~~~~~~~l~~~l~~a~~d~~i~~Vvl~~----~s~gg~~~~~----------------~~l~~~l~~~~ 71 (214)
T cd07022 12 VPRGSWLEASSGLTSYEGIAAAIRAALADPDVRAIVLDI----DSPGGEVAGV----------------FELADAIRAAR 71 (214)
T ss_pred eCCCCcccCCCCcccHHHHHHHHHHHhhCCCCcEEEEEE----eCCCCcHHHH----------------HHHHHHHHHHh
Confidence 355665665 45789999999999999999999999976 5677765422 11223333344
Q ss_pred hCCCcEEEEEccceecccceeecCCCeEEEeCceeEecC
Q 021410 83 THLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 121 (312)
Q Consensus 83 ~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~p 121 (312)
. +|||||+++|.|.|+|+.++++||+++|++++.|+..
T Consensus 72 ~-~KpViA~v~g~a~s~gy~lA~~aD~i~a~~~a~~g~i 109 (214)
T cd07022 72 A-GKPIVAFVNGLAASAAYWIASAADRIVVTPTAGVGSI 109 (214)
T ss_pred c-CCCEEEEECCchhhHHHHHHhcCCEEEEcCCCeEEee
Confidence 4 6999999999999999999999999999999988654
No 98
>cd07016 S14_ClpP_1 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. This subfamily only contains bacterial sequences. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which a
Probab=99.54 E-value=1.9e-14 Score=118.45 Aligned_cols=128 Identities=15% Similarity=0.178 Sum_probs=96.1
Q ss_pred HHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEccc
Q 021410 16 NMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGV 95 (312)
Q Consensus 16 ~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~ 95 (312)
.+...+.+.|+.+..+..+ .+.|.+ .|+++.. ...+...+..+|||||+.++|.
T Consensus 15 ~~~~~~~~~l~~~~~~~~i-~l~ins------pGG~~~~-------------------~~~i~~~i~~~~~pvi~~v~g~ 68 (160)
T cd07016 15 VTAKEFKDALDALGDDSDI-TVRINS------PGGDVFA-------------------GLAIYNALKRHKGKVTVKIDGL 68 (160)
T ss_pred cCHHHHHHHHHhccCCCCE-EEEEEC------CCCCHHH-------------------HHHHHHHHHhcCCCEEEEEcch
Confidence 5677888889988887333 344444 4444321 1234556777899999999999
Q ss_pred eecccceeecCCCeEEEeCceeEecCCCcccccCCCch---------------HHHhhhcCh--HH-HHHHHhcCCCCCH
Q 021410 96 TMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGA---------------SFYLSHLPG--HL-GEFLALTGAKLNG 157 (312)
Q Consensus 96 a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~---------------~~~l~r~~g--~~-a~~l~ltg~~i~a 157 (312)
|.|+|+.++++||+|+++++++|+++....|..+.... ...+.+..| .. ...++.++..+++
T Consensus 69 a~s~g~~ia~a~d~~~~~~~a~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~l~a 148 (160)
T cd07016 69 AASAASVIAMAGDEVEMPPNAMLMIHNPSTGAAGNADDLRKAADLLDKIDESIANAYAEKTGLSEEEISALMDAETWLTA 148 (160)
T ss_pred HHhHHHHHHhcCCeEEECCCcEEEEECCccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhCCeECcH
Confidence 99999999999999999999999998877665444321 223566667 45 6777777778999
Q ss_pred HHHHHcCcccee
Q 021410 158 AEMMACGLATHY 169 (312)
Q Consensus 158 ~eA~~~Glv~~v 169 (312)
+||+++||||+|
T Consensus 149 ~eA~~~GliD~v 160 (160)
T cd07016 149 QEAVELGFADEI 160 (160)
T ss_pred HHHHHcCCCCcC
Confidence 999999999985
No 99
>cd07023 S49_Sppa_N_C Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. This subfamily contains members with either a single domain (sometimes referred to as 36K type), such as sohB peptidase, protein C and archaeal signal peptide peptidase, or an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad
Probab=99.50 E-value=7e-14 Score=120.05 Aligned_cols=139 Identities=19% Similarity=0.171 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEcc
Q 021410 15 TNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNG 94 (312)
Q Consensus 15 ~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G 94 (312)
+.++.+|.++++.++.|+++++|+|++ +|.|+|+.... .+.+.+..+..++|||||+++|
T Consensus 16 ~~~~~~l~~~l~~a~~d~~i~~ivl~~----~s~Gg~~~~~~----------------~i~~~i~~~~~~~kpvia~v~g 75 (208)
T cd07023 16 GIGADSLIEQLRKAREDDSVKAVVLRI----NSPGGSVVASE----------------EIYREIRRLRKAKKPVVASMGD 75 (208)
T ss_pred CCCHHHHHHHHHHHHhCCCCcEEEEEE----ECCCCCHHHHH----------------HHHHHHHHHHhcCCcEEEEECC
Confidence 678999999999999999999999999 48899886421 1234556677789999999999
Q ss_pred ceecccceeecCCCeEEEeCceeEecCCC------------cccccCCCc---------h---------HHHhhhcCh--
Q 021410 95 VTMGGGAGVSIPGTFRVACGKTVFATPET------------LIGFHPDAG---------A---------SFYLSHLPG-- 142 (312)
Q Consensus 95 ~a~GgG~~lal~~D~~ia~~~a~f~~pe~------------~~G~~p~~g---------~---------~~~l~r~~g-- 142 (312)
.|.|+|+.++++||.+++++.+.|+..-+ ++|+-+..- . ...+..++.
T Consensus 76 ~~~s~g~~lA~aaD~i~a~~~s~~g~iG~~~~~~~~~~~l~k~Gi~~~~~~~g~~K~~~~~~~~~s~~~~e~~~~~l~~~ 155 (208)
T cd07023 76 VAASGGYYIAAAADKIVANPTTITGSIGVIGQGPNLEELLDKLGIERDTIKSGPGKDKGSPDRPLTEEERAILQALVDDI 155 (208)
T ss_pred cchhHHHHHHhhCCEEEECCCCeEEeCcEEEecCCHHHHHHhcCCceEEEecCCCccCCCCCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999998864322 233322110 0 011111111
Q ss_pred ---------------HHHHHHHhcCCCCCHHHHHHcCccceecCCC
Q 021410 143 ---------------HLGEFLALTGAKLNGAEMMACGLATHYSVSE 173 (312)
Q Consensus 143 ---------------~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~ 173 (312)
.....-++.|..+++++|++.||||++...+
T Consensus 156 ~~~f~~~Va~~R~~~~~~~~~~~~~~~~~a~~A~~~gLiD~i~~~~ 201 (208)
T cd07023 156 YDQFVDVVAEGRGMSGERLDKLADGRVWTGRQALELGLVDELGGLD 201 (208)
T ss_pred HHHHHHHHHhcCCCCHHHHHHhcCCcEEEHHHHHHcCCCcccCCHH
Confidence 1112234688899999999999999997533
No 100
>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type. E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both.
Probab=99.48 E-value=1.2e-13 Score=135.03 Aligned_cols=149 Identities=18% Similarity=0.240 Sum_probs=107.7
Q ss_pred HHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEccc
Q 021410 16 NMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGV 95 (312)
Q Consensus 16 ~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~ 95 (312)
.....+.+.++.+..|++||+|||+-. |.|++.... +.+++.+..+...+||||+.++|.
T Consensus 329 ~~~~~~~~~l~~a~~D~~VkaIVLrin----SpGGs~~as----------------e~i~~~i~~~~~~gKPVva~~~g~ 388 (584)
T TIGR00705 329 TGGDTVAALLRVARSDPDIKAVVLRIN----SPGGSVFAS----------------EIIRRELARAQARGKPVIVSMGAM 388 (584)
T ss_pred cCHHHHHHHHHHHhhCCCceEEEEEec----CCCCCHHHH----------------HHHHHHHHHHHhCCCcEEEEECCc
Confidence 345678888999999999999999975 334433210 112233444666789999999999
Q ss_pred eecccceeecCCCeEEEeCceeE------ecCC------CcccccCCCchHHHhhh------------------------
Q 021410 96 TMGGGAGVSIPGTFRVACGKTVF------ATPE------TLIGFHPDAGASFYLSH------------------------ 139 (312)
Q Consensus 96 a~GgG~~lal~~D~~ia~~~a~f------~~pe------~~~G~~p~~g~~~~l~r------------------------ 139 (312)
|.+||+.++++||.++|++.+.+ +.+. .++|+.|+...+..+..
T Consensus 389 aaSggY~iA~aaD~I~a~p~t~~GSIGv~~~~~~~~~~l~klGi~~~~~~t~~~~~~s~~~~~t~~~~~~~~~~l~~~y~ 468 (584)
T TIGR00705 389 AASGGYWIASAADYIVASPNTITGSIGVFSVLPTFENSLDRIGVHVDGVSTHELANVSLLRPLTAEDQAIMQLSVEAGYR 468 (584)
T ss_pred cccHHHHHHHhCCEEEECCCCeeecCEEEEEccCHHHHHHhcCCceEEEeccCcCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999877 5553 57899887665544332
Q ss_pred ----cC------hHHHHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhc
Q 021410 140 ----LP------GHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVT 187 (312)
Q Consensus 140 ----~~------g~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~ 187 (312)
.+ .....+.+.+|+.++|+||+++||||++. .++++....++++.
T Consensus 469 ~F~~~Va~~R~l~~e~v~~ia~Grv~tg~eA~~~GLVD~ig---~~~~Ai~~a~~la~ 523 (584)
T TIGR00705 469 RFLSVVSAGRNLTPTQVDKVAQGRVWTGEDAVSNGLVDALG---GLDEAVAKAAKLAH 523 (584)
T ss_pred HHHHHHHhhCCCCHHHHHHHHhCCCcCHHHHHHcCCcccCC---CHHHHHHHHHHHcC
Confidence 22 22256778899999999999999999994 45444443344433
No 101
>TIGR00706 SppA_dom signal peptide peptidase SppA, 36K type. The member of this family from Bacillus subtilis was shown to have properties consistent with a role in degrading signal peptides after cleavage from precursor proteins, although it was not demonstrated conclusively.
Probab=99.39 E-value=1.5e-12 Score=111.68 Aligned_cols=135 Identities=19% Similarity=0.193 Sum_probs=95.0
Q ss_pred HHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCC--CcEEEEEccc
Q 021410 18 GAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHL--KPHVAILNGV 95 (312)
Q Consensus 18 ~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--kp~Iaav~G~ 95 (312)
..+|.++|+.+..|+++++|||++. |.|+++... ..+...|..++ |||||.++|.
T Consensus 15 ~~~l~~~l~~a~~d~~i~~vvl~~~----s~Gg~~~~~-------------------~~l~~~i~~~~~~kpvia~v~g~ 71 (207)
T TIGR00706 15 PEDFDKKIKRIKDDKSIKALLLRIN----SPGGTVVAS-------------------EEIYEKLKKLKAKKPVVASMGGV 71 (207)
T ss_pred HHHHHHHHHHHhhCCCccEEEEEec----CCCCCHHHH-------------------HHHHHHHHHhcCCCCEEEEECCc
Confidence 5788999999999999999999985 788877532 12233444455 9999999999
Q ss_pred eecccceeecCCCeEEEeCceeEecCCC------------cccccCC---------Cc-----hH----HHhh-------
Q 021410 96 TMGGGAGVSIPGTFRVACGKTVFATPET------------LIGFHPD---------AG-----AS----FYLS------- 138 (312)
Q Consensus 96 a~GgG~~lal~~D~~ia~~~a~f~~pe~------------~~G~~p~---------~g-----~~----~~l~------- 138 (312)
|.|+|+.|+++||.++|++++.|+..-+ ++|+-+. .+ .+ ..+.
T Consensus 72 a~s~g~~la~aaD~i~a~p~a~vg~iGv~~~~~~~~~~l~k~Gv~~~~~~~g~~K~~~~~~~~~s~~~~e~~~~~l~~~~ 151 (207)
T TIGR00706 72 AASGGYYIAMAADEIVANPGTITGSIGVILQGANVEKLYEKLGIEFEVIKSGEYKDIGSPTRELTPEERDILQNLVNESY 151 (207)
T ss_pred cchHHHHHHhcCCEEEECCCCeEEeeeEEEecCCHHHHHHhCCceEEEEEcCCCcCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999988765333 2333110 00 00 0111
Q ss_pred ----------hcChHHHHHHHhcCCCCCHHHHHHcCccceecCCCCh
Q 021410 139 ----------HLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKL 175 (312)
Q Consensus 139 ----------r~~g~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l 175 (312)
|-+.....+=++.|+.+++++|++.||||++...+++
T Consensus 152 ~~f~~~va~~R~~~~~~~~~~~~~~~~~~~~A~~~gLvD~i~~~~~~ 198 (207)
T TIGR00706 152 EQFVQVVAKGRNLPVEDVKKFADGRVFTGRQALKLRLVDKLGTEDDA 198 (207)
T ss_pred HHHHHHHHhcCCCCHHHHHHHhcCCcccHHHHHHcCCCcccCCHHHH
Confidence 1122221223468999999999999999999765544
No 102
>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys
Probab=99.34 E-value=4.6e-12 Score=109.79 Aligned_cols=142 Identities=12% Similarity=-0.005 Sum_probs=101.6
Q ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 021410 13 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL 92 (312)
Q Consensus 13 l~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav 92 (312)
-+..++.+|.+.|+++..||++++|||+..+..| ++.++.++ ++.+..+...+|||||.+
T Consensus 26 ~~~~~~~~l~~~l~~a~~d~~ik~vvL~~~s~gg-~~~~~~el-------------------~~~i~~~~~~~kpVia~~ 85 (222)
T cd07018 26 SSELSLRDLLEALEKAAEDDRIKGIVLDLDGLSG-GLAKLEEL-------------------RQALERFRASGKPVIAYA 85 (222)
T ss_pred cCCccHHHHHHHHHHHhcCCCeEEEEEECCCCCC-CHHHHHHH-------------------HHHHHHHHHhCCeEEEEe
Confidence 4567899999999999999999999999988766 65555543 233444556799999999
Q ss_pred ccceecccceeecCCCeEEEeCceeEecCCCc------------ccccCC---------CchHHH-----------hhh-
Q 021410 93 NGVTMGGGAGVSIPGTFRVACGKTVFATPETL------------IGFHPD---------AGASFY-----------LSH- 139 (312)
Q Consensus 93 ~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~------------~G~~p~---------~g~~~~-----------l~r- 139 (312)
+| |.+||+.++++||.+++.+.+.|+..-+. +|+-+. .+..+. +..
T Consensus 86 ~~-~~sggy~lasaad~I~a~p~~~vg~iGv~~~~~~~~~ll~klGv~~~~~~~G~~K~~~~~~~~~~~s~~~r~~~~~~ 164 (222)
T cd07018 86 DG-YSQGQYYLASAADEIYLNPSGSVELTGLSAETLFFKGLLDKLGVEVQVFRVGEYKSAVEPFTRDDMSPEAREQTQAL 164 (222)
T ss_pred CC-CCchhhhhhhhCCEEEECCCceEEeeccchhhhhHHHHHHHcCCcEEEEEEeccccccchhhcccCCHHHHHHHHHH
Confidence 98 88999999999999999999999885432 222111 111110 011
Q ss_pred ----------------cChHHHHHHHhcCCCCCHHHHHHcCccceecCCCCh
Q 021410 140 ----------------LPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKL 175 (312)
Q Consensus 140 ----------------~~g~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l 175 (312)
-+.....+-+..|+.+++++|++.||||++...+++
T Consensus 165 l~~~~~~f~~~Va~~R~~~~~~~~~~~~~~~~~~~~A~~~GLvD~i~~~~e~ 216 (222)
T cd07018 165 LDSLWDQYLADVAASRGLSPDALEALIDLGGDSAEEALEAGLVDGLAYRDEL 216 (222)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCcHHHHHHHCCCCCcCCcHHHH
Confidence 111111222346999999999999999999854443
No 103
>cd07021 Clp_protease_NfeD_like Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentiall
Probab=99.34 E-value=5.6e-12 Score=105.06 Aligned_cols=133 Identities=17% Similarity=0.252 Sum_probs=98.2
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEE
Q 021410 12 ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI 91 (312)
Q Consensus 12 al~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa 91 (312)
.+++.+...|.+.|+++++++ ++.|+|.=. |.|+++.. ...+...|..+++|||+.
T Consensus 9 ~I~~~~~~~l~~~l~~a~~~~-~~~ivl~in----spGG~v~~-------------------~~~I~~~l~~~~~pvva~ 64 (178)
T cd07021 9 EIDPGLAAFVERALKEAKEEG-ADAVVLDID----TPGGRVDS-------------------ALEIVDLILNSPIPTIAY 64 (178)
T ss_pred EECHHHHHHHHHHHHHHHhCC-CCeEEEEEE----CcCCCHHH-------------------HHHHHHHHHhCCCCEEEE
Confidence 366788889999999999887 777777654 55665542 224556677899999999
Q ss_pred EccceecccceeecCCCeEEEeCceeEecCCCcccccCCCch--------HHH------hhhcChHH---HHHHHhcC--
Q 021410 92 LNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGA--------SFY------LSHLPGHL---GEFLALTG-- 152 (312)
Q Consensus 92 v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~--------~~~------l~r~~g~~---a~~l~ltg-- 152 (312)
|+|.|.|+|+.++++||++++++++.|+.+..- +..|. +.. +.+.-|+. +..|+-..
T Consensus 65 V~g~AaSaG~~ia~a~d~i~m~p~a~iG~~~~v----~~~~~~~~~~K~~~~~~~~~~~~A~~~gr~~~~a~~mv~~~~~ 140 (178)
T cd07021 65 VNDRAASAGALIALAADEIYMAPGATIGAAEPI----PGDGNGAADEKVQSYWRAKMRAAAEKKGRDPDIAEAMVDKDIE 140 (178)
T ss_pred ECCchHHHHHHHHHhCCeEEECCCCeEecCeeE----cCCCccchhHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhhhcc
Confidence 999999999999999999999999999998543 33222 111 12222332 45555444
Q ss_pred -----------CCCCHHHHHHcCccceecCC
Q 021410 153 -----------AKLNGAEMMACGLATHYSVS 172 (312)
Q Consensus 153 -----------~~i~a~eA~~~Glv~~vv~~ 172 (312)
-.++++||++.|++|.++++
T Consensus 141 v~~~~~~~~~~l~lta~eA~~~g~~d~ia~~ 171 (178)
T cd07021 141 VPGVGIKGGELLTLTADEALKVGYAEGIAGS 171 (178)
T ss_pred cccccccccceeeeCHHHHHHhCCeEEEECC
Confidence 27999999999999999864
No 104
>cd07015 Clp_protease_NfeD Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially cle
Probab=98.89 E-value=1.1e-08 Score=84.45 Aligned_cols=137 Identities=10% Similarity=0.201 Sum_probs=100.8
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEE
Q 021410 12 ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI 91 (312)
Q Consensus 12 al~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa 91 (312)
.+++.+..-|.+.++.+++| +++.|+|.=. |.|+++... ..++..|...++||++.
T Consensus 9 ~I~~~~~~~l~~~l~~A~~~-~~~~i~l~in----SPGG~v~~~-------------------~~I~~~i~~~~~pvv~~ 64 (172)
T cd07015 9 QITSYTYDQFDRYITIAEQD-NAEAIIIELD----TPGGRADAA-------------------GNIVQRIQQSKIPVIIY 64 (172)
T ss_pred EECHhHHHHHHHHHHHHhcC-CCCeEEEEEE----CCCCCHHHH-------------------HHHHHHHHhcCcCEEEE
Confidence 36778888899999998876 4788887665 667666432 13344566789999999
Q ss_pred Ec---cceecccceeecCCCeEEEeCceeEecCCCcccccCC----Cc----hHHHhh------hcChH--H-HHHHHhc
Q 021410 92 LN---GVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPD----AG----ASFYLS------HLPGH--L-GEFLALT 151 (312)
Q Consensus 92 v~---G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~----~g----~~~~l~------r~~g~--~-a~~l~lt 151 (312)
|+ |.|..+|..++++||.+++.+++.++....-.|..+. .. .+..+. +.-|+ . +..++-.
T Consensus 65 v~p~g~~AaSag~~I~~a~~~i~m~p~s~iG~~~pi~~~g~~~~~~~~~~ki~~~~~~~~r~~A~~~Gr~~~~a~~~v~~ 144 (172)
T cd07015 65 VYPPGASAASAGTYIALGSHLIAMAPGTSIGACRPILGYSQNGSIIEAPPKITNYFIAYIKSLAQESGRNATIAEEFITK 144 (172)
T ss_pred EecCCCeehhHHHHHHHhcCceEECCCCEEEEccccccCCCCCccccchHHHHHHHHHHHHHHHHHHCcCHHHHHHHHHh
Confidence 99 9999999999999999999999999998875432120 00 011111 12232 2 5677778
Q ss_pred CCCCCHHHHHHcCccceecCC
Q 021410 152 GAKLNGAEMMACGLATHYSVS 172 (312)
Q Consensus 152 g~~i~a~eA~~~Glv~~vv~~ 172 (312)
...++++||+++|++|.++.+
T Consensus 145 ~~~lta~EA~~~G~iD~ia~~ 165 (172)
T cd07015 145 DLSLTPEEALKYGVIEVVARD 165 (172)
T ss_pred hcCcCHHHHHHcCCceeeeCC
Confidence 888999999999999999865
No 105
>cd07013 S14_ClpP Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. Additionally, they are implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of proteas
Probab=98.87 E-value=1.5e-08 Score=83.42 Aligned_cols=134 Identities=13% Similarity=0.084 Sum_probs=92.6
Q ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 021410 13 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL 92 (312)
Q Consensus 13 l~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav 92 (312)
++..+..++.+.|..++.++..+.|+|.=. |.|+++.. ...++..|..+++|+++.+
T Consensus 9 I~~~~~~~~~~~L~~l~~~~~~~~i~l~In----SpGG~v~~-------------------~~~i~~~i~~~~~~v~~~~ 65 (162)
T cd07013 9 VEDISANQFAAQLLFLGAVNPEKDIYLYIN----SPGGDVFA-------------------GMAIYDTIKFIKADVVTII 65 (162)
T ss_pred ECcHHHHHHHHHHHHHhcCCCCCCEEEEEE----CCCCcHHH-------------------HHHHHHHHHhcCCCceEEE
Confidence 567889999999999999887777777655 56666532 1234555667889999999
Q ss_pred ccceecccceeecCCC--eEEEeCceeEecCCCcccccCCCchHH---------------HhhhcChH--H-HHHHHhcC
Q 021410 93 NGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGASF---------------YLSHLPGH--L-GEFLALTG 152 (312)
Q Consensus 93 ~G~a~GgG~~lal~~D--~~ia~~~a~f~~pe~~~G~~p~~g~~~---------------~l~r~~g~--~-a~~l~ltg 152 (312)
.|.|.++|..++++|| .|++.++++|.+....-|......-.. .+.+.-|. . ...++-.+
T Consensus 66 ~g~aaS~~~~i~~a~~~g~r~~~p~a~~~ih~~~~~~~g~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~ 145 (162)
T cd07013 66 DGLAASMGSVIAMAGAKGKRFILPNAMMMIHQPWGGTLGDATDMRIYADLLLKVEGNLVSAYAHKTGQSEEELHADLERD 145 (162)
T ss_pred EeehhhHHHHHHHcCCCCcEEEecCEEEEEccCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHcCC
Confidence 9999999999999999 688888888876543322211100001 01111121 1 34555566
Q ss_pred CCCCHHHHHHcCcccee
Q 021410 153 AKLNGAEMMACGLATHY 169 (312)
Q Consensus 153 ~~i~a~eA~~~Glv~~v 169 (312)
..++|+||+++||||++
T Consensus 146 ~~~sa~eA~~~GliD~i 162 (162)
T cd07013 146 TWLSAREAVEYGFADTI 162 (162)
T ss_pred ccccHHHHHHcCCCCcC
Confidence 77799999999999985
No 106
>KOG1683 consensus Hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=98.77 E-value=4.2e-09 Score=94.67 Aligned_cols=163 Identities=18% Similarity=0.043 Sum_probs=132.3
Q ss_pred EecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHH
Q 021410 3 ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLL 81 (312)
Q Consensus 3 tln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 81 (312)
+++ |+ .|..|.++.++|..-++.++.+..+++..+|+.. +.|++|.|..++.-. +......++..+.+++...
T Consensus 71 dmv-ie-av~edl~Lk~~l~~~le~v~~~~~i~gsntSs~~~~~isa~ld~~e~vvg----~h~fspa~~m~LlEii~~~ 144 (380)
T KOG1683|consen 71 DMV-IE-AVFEDLELKHELFKSLEKVEPPKCIRGSNTSSLDINVISAGLDRPEMVVG----MHFFSPAHWMQLLEIILAL 144 (380)
T ss_pred cee-cc-chhhhHHHHHHHHHHHHhhcCCcceeeeccccCChHHHhhccCchhhhcc----ccccCHHHHHHHHHHHHhc
Confidence 345 66 4999999999999999999999989999999988 999999999987633 3444455667788899999
Q ss_pred hhCCCcEEEEEccceeccc--ceeecCCCeEEEeC--ceeEecCCCcccc-cCCCchHHHhhhcChHH-HHHHHhcCCCC
Q 021410 82 GTHLKPHVAILNGVTMGGG--AGVSIPGTFRVACG--KTVFATPETLIGF-HPDAGASFYLSHLPGHL-GEFLALTGAKL 155 (312)
Q Consensus 82 ~~~~kp~Iaav~G~a~GgG--~~lal~~D~~ia~~--~a~f~~pe~~~G~-~p~~g~~~~l~r~~g~~-a~~l~ltg~~i 155 (312)
.+++.|+.+++||++--|| +-++.+|+|++... .=..+..+...++ +|++-.-. +....|.. +..-+--|.-+
T Consensus 145 ~tS~~~iA~Ain~~~~~gk~~vvVg~c~gf~v~r~l~~y~~~~~~~l~e~g~~p~~iD~-~~t~fGf~~g~~~L~d~~gf 223 (380)
T KOG1683|consen 145 YTSKLTIATAINGGSPAGKLPVVVGNCCGFRVNRLLPPYTIGLNELLLEIGADPWLIDS-LITKFGFRVGERALADGVGF 223 (380)
T ss_pred CCCchHHHHHHhcccccCCccEEeccCCceEEEecccHHHHHHHHHHHHcCCCHHHHHH-HHHhcCccccHHHHhhccCc
Confidence 9999999999999999888 99999999999984 4444778888884 44443333 33445666 66666788899
Q ss_pred CHHHHHHcCccceecCC
Q 021410 156 NGAEMMACGLATHYSVS 172 (312)
Q Consensus 156 ~a~eA~~~Glv~~vv~~ 172 (312)
+..||++-|+++++.|.
T Consensus 224 dv~eal~~gl~~~~~~r 240 (380)
T KOG1683|consen 224 DVAEALAVGLGDEIGPR 240 (380)
T ss_pred cHHHHHhhccchhccch
Confidence 99999999999999885
No 107
>PRK00277 clpP ATP-dependent Clp protease proteolytic subunit; Reviewed
Probab=98.76 E-value=4.2e-08 Score=83.48 Aligned_cols=134 Identities=16% Similarity=0.088 Sum_probs=87.1
Q ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 021410 13 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL 92 (312)
Q Consensus 13 l~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav 92 (312)
++..+...+...|..++.++..+-|.|.=. |.|+|+.. ...++..|...+.|+++.+
T Consensus 40 I~~~~~~~i~~~L~~l~~~~~~~~I~l~In----SpGG~v~~-------------------g~~I~d~i~~~~~~v~t~~ 96 (200)
T PRK00277 40 VEDHMANLIVAQLLFLEAEDPDKDIYLYIN----SPGGSVTA-------------------GLAIYDTMQFIKPDVSTIC 96 (200)
T ss_pred ECHHHHHHHHHHHHHhhccCCCCCEEEEEE----CCCCcHHH-------------------HHHHHHHHHhcCCCEEEEE
Confidence 577888888888888876644333433322 45555432 1234445667788999999
Q ss_pred ccceecccceeecCCC--eEEEeCceeEecCCCcccccCCCchHH------------------HhhhcChH--H-HHHHH
Q 021410 93 NGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGASF------------------YLSHLPGH--L-GEFLA 149 (312)
Q Consensus 93 ~G~a~GgG~~lal~~D--~~ia~~~a~f~~pe~~~G~~p~~g~~~------------------~l~r~~g~--~-a~~l~ 149 (312)
.|.|.+.|..|+++++ .|++.++++|++....-|. .|.+. .+...-|. . ...++
T Consensus 97 ~G~aaS~a~~I~~ag~~~~r~~~p~s~imih~p~~~~---~G~a~di~~~a~~l~~~~~~~~~~~a~~tg~~~~~i~~~~ 173 (200)
T PRK00277 97 IGQAASMGAFLLAAGAKGKRFALPNSRIMIHQPLGGF---QGQATDIEIHAREILKLKKRLNEILAEHTGQPLEKIEKDT 173 (200)
T ss_pred EeEeccHHHHHHhcCCCCCEEEcCCceEEeccCcccc---cCChhHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHh
Confidence 9999999999988743 5777777776665443222 11111 11222232 2 34555
Q ss_pred hcCCCCCHHHHHHcCccceecCC
Q 021410 150 LTGAKLNGAEMMACGLATHYSVS 172 (312)
Q Consensus 150 ltg~~i~a~eA~~~Glv~~vv~~ 172 (312)
-.+..++|+||+++||||+|+.+
T Consensus 174 ~~~~~lsa~EA~e~GliD~Ii~~ 196 (200)
T PRK00277 174 DRDNFMSAEEAKEYGLIDEVLTK 196 (200)
T ss_pred hCCccccHHHHHHcCCccEEeec
Confidence 66778999999999999999975
No 108
>PRK10949 protease 4; Provisional
Probab=98.67 E-value=1.1e-07 Score=93.43 Aligned_cols=133 Identities=18% Similarity=0.221 Sum_probs=89.3
Q ss_pred HHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEccceec
Q 021410 19 AKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMG 98 (312)
Q Consensus 19 ~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~G 98 (312)
..+.+.|+.+..|++||+|||+-. |.|+.... .+.+++.+..+....||||+.+.|.|..
T Consensus 350 ~~~~~~l~~a~~D~~vkaVvLrIn----SpGGs~~a----------------se~i~~~i~~~r~~gKPVvas~~~~aAS 409 (618)
T PRK10949 350 DTTAAQIRDARLDPKVKAIVLRVN----SPGGSVTA----------------SEVIRAELAAARAAGKPVVVSMGGMAAS 409 (618)
T ss_pred HHHHHHHHHHHhCCCCcEEEEEec----CCCCcHHH----------------HHHHHHHHHHHHhcCCcEEEEECCCCcc
Confidence 456778899999999999999887 44443321 1223344444556789999999999999
Q ss_pred ccceeecCCCeEEEeCceeEecCCC------------cccccCCCchH-----------------HHhh-----------
Q 021410 99 GGAGVSIPGTFRVACGKTVFATPET------------LIGFHPDAGAS-----------------FYLS----------- 138 (312)
Q Consensus 99 gG~~lal~~D~~ia~~~a~f~~pe~------------~~G~~p~~g~~-----------------~~l~----------- 138 (312)
||+.++++||.++|.+.+..+.--+ ++|+-+..-.+ ..+.
T Consensus 410 ggY~iA~aad~I~a~p~t~tGSIGV~~~~~~~~~ll~klGV~~~~~~~~~~~~~~~~~~~s~e~~~~~q~~ld~~y~~F~ 489 (618)
T PRK10949 410 GGYWISTPANYIVASPSTLTGSIGIFGVINTVENSLDSIGVHTDGVSTSPLADVSITKALPPEFQQMMQLSIENGYKRFI 489 (618)
T ss_pred HHHHHHHhcCEEEECCCCceeeCcEEEEccCHHHHHHhcCCceeEEeccccCCccccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999765443221 23432221100 0111
Q ss_pred ------hcChHHHHHHHhcCCCCCHHHHHHcCccceecC
Q 021410 139 ------HLPGHLGEFLALTGAKLNGAEMMACGLATHYSV 171 (312)
Q Consensus 139 ------r~~g~~a~~l~ltg~~i~a~eA~~~Glv~~vv~ 171 (312)
|-+.....+-+..|+.+++++|++.||||++-.
T Consensus 490 ~~Va~~R~~~~~~v~~ia~Grv~tg~~A~~~GLVD~lG~ 528 (618)
T PRK10949 490 TLVADSRHKTPEQIDKIAQGHVWTGQDAKANGLVDSLGD 528 (618)
T ss_pred HHHHhhCCCCHHHHHHHhcCCcccHHHHHHcCCCccCCC
Confidence 111111122346899999999999999999965
No 109
>PRK12553 ATP-dependent Clp protease proteolytic subunit; Reviewed
Probab=98.64 E-value=1.7e-07 Score=80.21 Aligned_cols=136 Identities=14% Similarity=0.054 Sum_probs=96.7
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEE
Q 021410 12 ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI 91 (312)
Q Consensus 12 al~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa 91 (312)
.++..+..++.+.|..++..+..+.|.|.=. |.|+++..- ..++..|..++.|+++.
T Consensus 43 ~I~~~~~~~i~~~L~~l~~~~~~~~I~l~IN----SpGG~v~~g-------------------~~I~d~i~~~~~~v~t~ 99 (207)
T PRK12553 43 QVDDASANDVMAQLLVLESIDPDRDITLYIN----SPGGSVTAG-------------------DAIYDTIQFIRPDVQTV 99 (207)
T ss_pred eECHHHHHHHHHHHHHHHhCCCCCCEEEEEe----CCCCcHHHH-------------------HHHHHHHHhcCCCcEEE
Confidence 3678899999999999987654444444333 556665421 23455566788899999
Q ss_pred EccceecccceeecCCC--eEEEeCceeEecCCCcc-cccCCCchH------------------HHhhhcChH--H-HHH
Q 021410 92 LNGVTMGGGAGVSIPGT--FRVACGKTVFATPETLI-GFHPDAGAS------------------FYLSHLPGH--L-GEF 147 (312)
Q Consensus 92 v~G~a~GgG~~lal~~D--~~ia~~~a~f~~pe~~~-G~~p~~g~~------------------~~l~r~~g~--~-a~~ 147 (312)
+.|.|.+.|.-|+++|| .|++.++++|.+..... |. ..|.. ..+.+.-|. . ...
T Consensus 100 ~~G~aaSaa~lI~~ag~~~~R~~~p~s~imiH~p~~~~~--~~G~a~d~~~~~~~l~~~~~~~~~~ya~~tg~~~e~i~~ 177 (207)
T PRK12553 100 CTGQAASAGAVLLAAGTPGKRFALPNARILIHQPSLGGG--IRGQASDLEIQAREILRMRERLERILAEHTGQSVEKIRK 177 (207)
T ss_pred EEeehhhHHHHHHHcCCcCcEEECCCchhhhcCccccCC--CccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 99999999999999999 59999999999877653 21 12211 112222232 2 455
Q ss_pred HHhcCCCCCHHHHHHcCccceecCC
Q 021410 148 LALTGAKLNGAEMMACGLATHYSVS 172 (312)
Q Consensus 148 l~ltg~~i~a~eA~~~Glv~~vv~~ 172 (312)
++-.+..++|+||+++||||+|+++
T Consensus 178 ~~~~~~~lta~EA~e~GliD~I~~~ 202 (207)
T PRK12553 178 DTDRDKWLTAEEAKDYGLVDQIITS 202 (207)
T ss_pred HHhcCccccHHHHHHcCCccEEcCc
Confidence 6667899999999999999999964
No 110
>cd07017 S14_ClpP_2 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activ
Probab=98.59 E-value=2.5e-07 Score=76.85 Aligned_cols=134 Identities=16% Similarity=0.087 Sum_probs=94.8
Q ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 021410 13 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL 92 (312)
Q Consensus 13 l~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav 92 (312)
++..+...+...+..+..++..+.|+|.=. |.|+|+..- ..++..|...+.|+++.+
T Consensus 18 I~~~~~~~i~~~l~~~~~~~~~~~i~l~in----SpGG~v~~~-------------------~~i~~~l~~~~~~v~t~~ 74 (171)
T cd07017 18 IDDEVANLIIAQLLYLESEDPKKPIYLYIN----SPGGSVTAG-------------------LAIYDTMQYIKPPVSTIC 74 (171)
T ss_pred EcHHHHHHHHHHHHHHHccCCCCceEEEEE----CCCCCHHHH-------------------HHHHHHHHhcCCCEEEEE
Confidence 577888999999999998766565555443 556655421 133444566789999999
Q ss_pred ccceecccceeecCCC--eEEEeCceeEecCCCcccccCCCchHH---------------HhhhcChH--H-HHHHHhcC
Q 021410 93 NGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGASF---------------YLSHLPGH--L-GEFLALTG 152 (312)
Q Consensus 93 ~G~a~GgG~~lal~~D--~~ia~~~a~f~~pe~~~G~~p~~g~~~---------------~l~r~~g~--~-a~~l~ltg 152 (312)
.|.|.++|.-+++++| -|++.++++|.+.+...+..-...-.. .+....|. . ...++-.+
T Consensus 75 ~g~aaS~~~~i~~~g~~~~r~~~~~a~~~~h~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~tg~~~~~i~~~~~~~ 154 (171)
T cd07017 75 LGLAASMGALLLAAGTKGKRYALPNSRIMIHQPLGGAGGQASDIEIQAKEILRLRRRLNEILAKHTGQPLEKIEKDTDRD 154 (171)
T ss_pred EeEehhHHHHHHHcCCCCCEEEccchHHHHcCCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhCC
Confidence 9999999999999999 799999999999887655432210000 00111121 2 34555678
Q ss_pred CCCCHHHHHHcCcccee
Q 021410 153 AKLNGAEMMACGLATHY 169 (312)
Q Consensus 153 ~~i~a~eA~~~Glv~~v 169 (312)
..++++||+++||||+|
T Consensus 155 ~~lta~EA~e~GiiD~V 171 (171)
T cd07017 155 RYMSAEEAKEYGLIDKI 171 (171)
T ss_pred ccccHHHHHHcCCCccC
Confidence 88999999999999986
No 111
>PRK14512 ATP-dependent Clp protease proteolytic subunit; Provisional
Probab=98.53 E-value=6.1e-07 Score=76.04 Aligned_cols=137 Identities=14% Similarity=0.091 Sum_probs=91.8
Q ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 021410 13 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL 92 (312)
Q Consensus 13 l~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav 92 (312)
++..+...+.+.|..++..+..+.|.|.=. |.|+++.. ...++..|...+.||++.+
T Consensus 32 I~~~~~~~i~~~L~~l~~~~~~~~I~l~IN----SpGG~v~a-------------------g~aI~d~i~~~~~~V~t~v 88 (197)
T PRK14512 32 INKDLSELFQEKILLLEALDSKKPIFVYID----SEGGDIDA-------------------GFAIFNMIRFVKPKVFTIG 88 (197)
T ss_pred EcHHHHHHHHHHHHHHHhcCCCCCEEEEEE----CCCCCHHH-------------------HHHHHHHHHhCCCCEEEEE
Confidence 678888999999988876333444444433 55666532 1234555667899999999
Q ss_pred ccceecccceeecCCCe--EEEeCceeEecCCCcccccCCCchHH---------------HhhhcChH--H-HHHHHhcC
Q 021410 93 NGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASF---------------YLSHLPGH--L-GEFLALTG 152 (312)
Q Consensus 93 ~G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~G~~p~~g~~~---------------~l~r~~g~--~-a~~l~ltg 152 (312)
.|.|.+.|.-++++||- |++.++++|.+....-|+.....-.. .+...-|. . ...++-..
T Consensus 89 ~G~AaSaaslIl~ag~~~~R~~~p~s~imiHqP~~~~~G~a~di~~~a~~l~~~~~~i~~~~a~~tg~~~~~i~~~~~~d 168 (197)
T PRK14512 89 VGLVASAAALIFLAAKKESRFSLPNARYLLHQPLSGFKGVATDIEIYANELNKVKSELNDIIAKETGQELDKVEKDTDRD 168 (197)
T ss_pred EeeeHhHHHHHHhcCCcCceeECCCCcEEEEcCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHhhhcC
Confidence 99999999999999985 99999998877655433311111000 01111122 1 34445556
Q ss_pred CCCCHHHHHHcCccceecCC
Q 021410 153 AKLNGAEMMACGLATHYSVS 172 (312)
Q Consensus 153 ~~i~a~eA~~~Glv~~vv~~ 172 (312)
..++|+||+++||+|+|++.
T Consensus 169 ~~lta~EA~~yGliD~I~~~ 188 (197)
T PRK14512 169 FWLDSSSAVKYGLVFEVVET 188 (197)
T ss_pred cccCHHHHHHcCCccEeecC
Confidence 77999999999999999975
No 112
>PF00574 CLP_protease: Clp protease; InterPro: IPR001907 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to the MEROPS peptidase family S14 (ClpP endopeptidase family, clan SK). ClpP is an ATP-dependent protease that cleaves a number of proteins, such as casein and albumin []. It exists as a heterodimer of ATP-binding regulatory A and catalytic P subunits, both of which are required for effective levels of protease activity in the presence of ATP [], although the P subunit alone does possess some catalytic activity. This family of sequences represent the P subunit. Proteases highly similar to ClpP have been found to be encoded in the genome of bacteria, metazoa, some viruses and in the chloroplast of plants. A number of the proteins in this family are classified as non-peptidase homologues as they have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for catalytic activity. ; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2ZL3_L 2ZL0_F 2ZL2_M 2ZL4_C 1TG6_D 2F6I_D 3V5I_b 3V5E_M 3QWD_D 2DEO_A ....
Probab=98.50 E-value=2.9e-07 Score=77.33 Aligned_cols=137 Identities=16% Similarity=0.157 Sum_probs=90.1
Q ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 021410 13 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL 92 (312)
Q Consensus 13 l~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav 92 (312)
+|.++...+...|..++.++..+-|.|.=. |.|+|+..- ..++..|..++.|+++.+
T Consensus 25 I~~~~~~~~~~~L~~l~~~~~~~~i~i~IN----SpGG~v~~g-------------------~~i~~~i~~~~~~v~t~~ 81 (182)
T PF00574_consen 25 IDEESANRLISQLLYLENEDKNKPINIYIN----SPGGDVDAG-------------------LAIYDAIRSSKAPVTTVV 81 (182)
T ss_dssp BSHHHHHHHHHHHHHHHHHTSSSEEEEEEE----ECEBCHHHH-------------------HHHHHHHHHSSSEEEEEE
T ss_pred cCHHHHHHHHHHHHHHhccCCCceEEEEEc----CCCCccHHH-------------------HHHHHHHHhcCCCeEEEE
Confidence 688899999998887743332222222211 566766431 245566778899999999
Q ss_pred ccceecccceeecCCCe--EEEeCceeEecCCCcccccCCCchHH----Hhhh-----------cCh--HH-HHHHHhcC
Q 021410 93 NGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASF----YLSH-----------LPG--HL-GEFLALTG 152 (312)
Q Consensus 93 ~G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~G~~p~~g~~~----~l~r-----------~~g--~~-a~~l~ltg 152 (312)
.|.|.+.|.-++++||. |++.+++.|.+.+...+......... .+.+ ..| .. ..+++-..
T Consensus 82 ~G~aaSaa~~i~~ag~~~~R~~~~~s~~m~H~p~~~~~g~~~~l~~~~~~l~~~~~~~~~~~~~~tg~~~~~i~~~~~~~ 161 (182)
T PF00574_consen 82 LGLAASAATLIFLAGDKGKRYASPNSRFMIHQPSTGSGGNASELREQAKELEKLNERIANIYAERTGLSKEEIEELMDRD 161 (182)
T ss_dssp EEEEETHHHHHHHTSSTTTEEE-TT-EEEES-CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTS-HHHHHHHCSST
T ss_pred eCccccceehhhhcCCcCceeeeecCEEEeecceeecccccchhHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHhCC
Confidence 99999999999999999 89999999999988766533111111 0100 111 11 23444455
Q ss_pred CCCCHHHHHHcCccceecCC
Q 021410 153 AKLNGAEMMACGLATHYSVS 172 (312)
Q Consensus 153 ~~i~a~eA~~~Glv~~vv~~ 172 (312)
..++|+||+++||||+|+.+
T Consensus 162 ~~l~a~EA~~~GiiD~I~~~ 181 (182)
T PF00574_consen 162 TWLSAEEALEYGIIDEIIES 181 (182)
T ss_dssp EEEEHHHHHHHTSSSEEESS
T ss_pred ccccHHHHHHcCCCCEeccC
Confidence 56899999999999999853
No 113
>CHL00028 clpP ATP-dependent Clp protease proteolytic subunit
Probab=98.42 E-value=1.7e-06 Score=73.37 Aligned_cols=136 Identities=13% Similarity=0.076 Sum_probs=94.7
Q ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 021410 13 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL 92 (312)
Q Consensus 13 l~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav 92 (312)
+|.++.+.+...|-.++.++..+-|.|.=. |.|+|+.. ...++..|...+.||...+
T Consensus 39 i~~~~a~~ii~~ll~L~~~~~~~~I~l~IN----SpGG~v~~-------------------g~aIyd~m~~~~~~V~Tv~ 95 (200)
T CHL00028 39 VDDEIANQLIGLMVYLSIEDDTKDLYLFIN----SPGGSVIS-------------------GLAIYDTMQFVKPDVHTIC 95 (200)
T ss_pred ecHHHHHHHHHHHHHHhccCCCCCEEEEEe----CCCcchhh-------------------HHHHHHHHHhcCCCEEEEE
Confidence 688899999999998876544444444333 45555432 1234556778899999999
Q ss_pred ccceecccceeecCCC--eEEEeCceeEecCCCcccccCCCch-HH-----------------HhhhcChH--H-HHHHH
Q 021410 93 NGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGA-SF-----------------YLSHLPGH--L-GEFLA 149 (312)
Q Consensus 93 ~G~a~GgG~~lal~~D--~~ia~~~a~f~~pe~~~G~~p~~g~-~~-----------------~l~r~~g~--~-a~~l~ 149 (312)
.|.|.+.|.-|++++| -|++.++++|.+.....|.. .|- +- .+...-|. . ..+++
T Consensus 96 ~G~AaS~aslIl~aG~kg~R~~~p~s~imiHqp~~~~~--~G~a~di~~~a~~l~~~~~~~~~~ya~~Tg~~~e~i~~~~ 173 (200)
T CHL00028 96 LGLAASMASFILAGGEITKRLAFPHARVMIHQPASSFY--EGQASEFVLEAEELLKLRETITRVYAQRTGKPLWVISEDM 173 (200)
T ss_pred EEehHHHHHHHHhCCCCCCEEecCCCeEEEecCccCcC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHh
Confidence 9999999999999999 69999999999887765532 221 11 11111121 1 24455
Q ss_pred hcCCCCCHHHHHHcCccceecCCC
Q 021410 150 LTGAKLNGAEMMACGLATHYSVSE 173 (312)
Q Consensus 150 ltg~~i~a~eA~~~Glv~~vv~~~ 173 (312)
-....++|+||+++||||+|+.+.
T Consensus 174 ~r~~~lta~EA~eyGliD~I~~~~ 197 (200)
T CHL00028 174 ERDVFMSATEAKAYGIVDLVAVNN 197 (200)
T ss_pred hcCccCCHHHHHHcCCCcEEeecC
Confidence 566679999999999999999754
No 114
>PRK12319 acetyl-CoA carboxylase subunit alpha; Provisional
Probab=98.42 E-value=3.9e-06 Score=73.74 Aligned_cols=138 Identities=16% Similarity=0.081 Sum_probs=94.0
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEE
Q 021410 10 LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV 89 (312)
Q Consensus 10 ~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~I 89 (312)
..+++++-+....+.++.+.+.. +-+|-|.=.++++. |.+-. .......+.+.+..+....+|+|
T Consensus 76 ~G~~~~~g~rKa~R~~~lA~~~~-lPvV~lvDtpGa~~-g~~aE-------------~~G~~~~ia~~~~~~s~~~VP~I 140 (256)
T PRK12319 76 FGQPHPEGYRKALRLMKQAEKFG-RPVVTFINTAGAYP-GVGAE-------------ERGQGEAIARNLMEMSDLKVPII 140 (256)
T ss_pred CCCCCHHHHHHHHHHHHHHHHcC-CCEEEEEECCCcCC-CHhHH-------------hccHHHHHHHHHHHHhCCCCCEE
Confidence 45688999999999999887653 55565555433332 32211 11223445566677888999999
Q ss_pred EEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChH--HHHHHHhcCCCCCHHHHHHcCccc
Q 021410 90 AILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH--LGEFLALTGAKLNGAEMMACGLAT 167 (312)
Q Consensus 90 aav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~--~a~~l~ltg~~i~a~eA~~~Glv~ 167 (312)
+.|-|.|.|||......||++++.+++.|+. .++-|++..+-+--.. .+.+.+ .+++.++.+.|+||
T Consensus 141 sVI~G~~~gGgA~a~~~~D~v~m~~~a~~~v-------~~pe~~a~il~~~~~~a~~aa~~~----~~~a~~l~~~g~iD 209 (256)
T PRK12319 141 AIIIGEGGSGGALALAVADQVWMLENTMYAV-------LSPEGFASILWKDGSRATEAAELM----KITAGELLEMGVVD 209 (256)
T ss_pred EEEeCCcCcHHHHHhhcCCEEEEecCceEEE-------cCHHHHHHHHhcCcccHHHHHHHc----CCCHHHHHHCCCCc
Confidence 9999999999888888999999998887654 3333333333332111 133332 77999999999999
Q ss_pred eecCCC
Q 021410 168 HYSVSE 173 (312)
Q Consensus 168 ~vv~~~ 173 (312)
+|+|..
T Consensus 210 ~ii~e~ 215 (256)
T PRK12319 210 KVIPEH 215 (256)
T ss_pred EecCCC
Confidence 999854
No 115
>TIGR00493 clpP ATP-dependent Clp protease, proteolytic subunit ClpP. This model for the proteolytic subunit ClpP has been rebuilt to a higher stringency. In every bacterial genome with the ClpXP machine, a ClpP protein will be found that scores with this model. In general, this ClpP member will be encoded adjacent to the clpX gene, as were all examples used in the seed alignment. A large fraction of genomes have one or more additional ClpP paralogs, sometimes encoded nearby and sometimes elsewhere. The stringency of the trusted cutoff used here excludes the more divergent ClpP paralogs from being called authentic ClpP by this model.
Probab=98.37 E-value=3.6e-06 Score=71.08 Aligned_cols=136 Identities=15% Similarity=0.042 Sum_probs=89.9
Q ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 021410 13 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL 92 (312)
Q Consensus 13 l~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav 92 (312)
++..+...+...|..++.++..+-|.|.=. |.|+|+.. ...++..|...+.|+...+
T Consensus 35 I~~~~~~~ii~~L~~l~~~~~~~~i~l~In----SpGG~v~~-------------------g~~I~d~l~~~~~~v~t~~ 91 (191)
T TIGR00493 35 VNDSVANLIVAQLLFLEAEDPEKDIYLYIN----SPGGSITA-------------------GLAIYDTMQFIKPDVSTIC 91 (191)
T ss_pred EChHHHHHHHHHHHHhhccCCCCCEEEEEE----CCCCCHHH-------------------HHHHHHHHHhcCCCEEEEE
Confidence 567777888888888887654444444333 45666532 1233445566677888888
Q ss_pred ccceecccceeecCCC--eEEEeCceeEecCCCcccccCCCchHH---------------HhhhcChH--H-HHHHHhcC
Q 021410 93 NGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGASF---------------YLSHLPGH--L-GEFLALTG 152 (312)
Q Consensus 93 ~G~a~GgG~~lal~~D--~~ia~~~a~f~~pe~~~G~~p~~g~~~---------------~l~r~~g~--~-a~~l~ltg 152 (312)
.|.|.+.|.-+++++| .|++.++++|.+.+...|......-.. .+.+.-|. . ...++-.+
T Consensus 92 ~G~AaSaaslI~~aG~~~~r~~~p~s~imiH~p~~~~~G~a~d~~~~a~~l~~~~~~~~~~ya~~tg~~~~~i~~~~~~~ 171 (191)
T TIGR00493 92 IGQAASMGAFLLSAGAKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQANEILRLKGLLNDILANHTGQSLEQIEKDTERD 171 (191)
T ss_pred EEeeccHHHHHHhcCCCCcEEecCCceEEEecCcccccCCcchhHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHhhCC
Confidence 8999999998888765 699999999999776544322111110 11122232 2 45566677
Q ss_pred CCCCHHHHHHcCccceecC
Q 021410 153 AKLNGAEMMACGLATHYSV 171 (312)
Q Consensus 153 ~~i~a~eA~~~Glv~~vv~ 171 (312)
..++|+||+++||+|+|+.
T Consensus 172 ~~lta~EA~~~GliD~ii~ 190 (191)
T TIGR00493 172 FFMSAEEAKEYGLIDSVLT 190 (191)
T ss_pred ccCcHHHHHHcCCccEEec
Confidence 8899999999999999974
No 116
>CHL00198 accA acetyl-CoA carboxylase carboxyltransferase alpha subunit; Provisional
Probab=98.36 E-value=6.5e-06 Score=74.10 Aligned_cols=140 Identities=14% Similarity=0.041 Sum_probs=93.4
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEE
Q 021410 10 LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV 89 (312)
Q Consensus 10 ~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~I 89 (312)
..+++++-++...+.++.+++.. +-+|-|--.+++++ |.+-. .......+.+.+..+....+|+|
T Consensus 132 ~G~~~p~g~rKa~Rlm~lA~~f~-lPIItlvDTpGA~~-G~~AE-------------~~G~~~aiar~l~~~a~~~VP~I 196 (322)
T CHL00198 132 FGMPSPGGYRKALRLMKHANKFG-LPILTFIDTPGAWA-GVKAE-------------KLGQGEAIAVNLREMFSFEVPII 196 (322)
T ss_pred CCCCCHHHHHHHHHHHHHHHHcC-CCEEEEEeCCCcCc-CHHHH-------------HHhHHHHHHHHHHHHHcCCCCEE
Confidence 45688999999999999988653 55555544433333 32111 11223445556666788999999
Q ss_pred EEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHHHHHcCcccee
Q 021410 90 AILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHY 169 (312)
Q Consensus 90 aav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~eA~~~Glv~~v 169 (312)
+.|-|.|.|||......||++++.+++.|+. +.|.++++. |-+--.. +.+ +-..-.++|++.++.|+||+|
T Consensus 197 sVViGeggsGGAlal~~aD~V~m~e~a~~sV------isPEg~a~I-l~~d~~~-a~~-aA~~~~ita~dL~~~giiD~i 267 (322)
T CHL00198 197 CTIIGEGGSGGALGIGIGDSIMMLEYAVYTV------ATPEACAAI-LWKDSKK-SLD-AAEALKITSEDLKVLGIIDEI 267 (322)
T ss_pred EEEeCcccHHHHHhhhcCCeEEEeCCeEEEe------cCHHHHHHH-Hhcchhh-HHH-HHHHcCCCHHHHHhCCCCeEe
Confidence 9999999888866555699999999987764 234444433 3332221 222 234458899999999999999
Q ss_pred cCCC
Q 021410 170 SVSE 173 (312)
Q Consensus 170 v~~~ 173 (312)
+|..
T Consensus 268 i~Ep 271 (322)
T CHL00198 268 IPEP 271 (322)
T ss_pred ccCC
Confidence 9843
No 117
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=98.35 E-value=5.5e-06 Score=75.56 Aligned_cols=85 Identities=19% Similarity=0.309 Sum_probs=63.4
Q ss_pred HHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEcccee
Q 021410 18 GAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTM 97 (312)
Q Consensus 18 ~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~ 97 (312)
...+.+.++.+..|++++.|+|.=. |.|+.... ...+++.+..+..-. ||++.|++.|.
T Consensus 82 ~~~~~~~l~~~~~~~~vk~vvL~in----SPGG~v~a----------------s~~i~~~l~~l~~~~-PV~v~v~~~AA 140 (317)
T COG0616 82 GDDIEEILRAARADPSVKAVVLRIN----SPGGSVVA----------------SELIARALKRLRAKK-PVVVSVGGYAA 140 (317)
T ss_pred HHHHHHHHHHHhcCCCCceEEEEEE----CcCCchhH----------------HHHHHHHHHHHhhcC-CEEEEECCeec
Confidence 4566667888899999999999775 56665431 122334444454444 99999999999
Q ss_pred cccceeecCCCeEEEeCceeEecCCC
Q 021410 98 GGGAGVSIPGTFRVACGKTVFATPET 123 (312)
Q Consensus 98 GgG~~lal~~D~~ia~~~a~f~~pe~ 123 (312)
.||..++++||.+||++.+..|---+
T Consensus 141 SGGY~IA~aAd~I~a~p~si~GSIGV 166 (317)
T COG0616 141 SGGYYIALAADKIVADPSSITGSIGV 166 (317)
T ss_pred chhhhhhccCCEEEecCCceeeecee
Confidence 99999999999999999886665443
No 118
>PRK14514 ATP-dependent Clp protease proteolytic subunit; Provisional
Probab=98.24 E-value=1.4e-05 Score=68.63 Aligned_cols=137 Identities=11% Similarity=0.031 Sum_probs=88.9
Q ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 021410 13 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL 92 (312)
Q Consensus 13 l~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav 92 (312)
+|..+.+.+...|..++..+.-+-|.+.=+ |.|+++.. ...++..|...+-||...+
T Consensus 63 Idd~~a~~i~aqLl~L~~~~~~~~I~lyIN----SpGGsv~a-------------------GlaIyd~m~~~~~~V~tv~ 119 (221)
T PRK14514 63 IDDYTANTIQAQLLYLDSVDPGKDISIYIN----SPGGSVYA-------------------GLGIYDTMQFISSDVATIC 119 (221)
T ss_pred EcHHHHHHHHHHHHHHhccCCCCCEEEEEE----CCCcchhh-------------------HHHHHHHHHhcCCCEEEEE
Confidence 567777777777766664332232322222 44444431 1234556777889999999
Q ss_pred ccceecccceeecCCCe--EEEeCceeEecCCCcccccCCCchHH---------------HhhhcChHH---HHHHHhcC
Q 021410 93 NGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASF---------------YLSHLPGHL---GEFLALTG 152 (312)
Q Consensus 93 ~G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~G~~p~~g~~~---------------~l~r~~g~~---a~~l~ltg 152 (312)
.|.|.+.|.-|++++|. |++.++++|.+....-|......-.. .+.+.-|.. ..+.+-..
T Consensus 120 ~G~AAS~AslIl~aG~~gkR~~~pna~iMiHqP~~~~~G~a~di~i~a~el~~~~~~i~~iya~~TG~~~e~I~~~~~rd 199 (221)
T PRK14514 120 TGMAASMASVLLVAGTKGKRSALPHSRVMIHQPLGGAQGQASDIEITAREIQKLKKELYTIIADHSGTPFDKVWADSDRD 199 (221)
T ss_pred EEEehhHHHHHHhcCCCCceeeCCCCEEEeccCCcccCCCcchHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHhhcC
Confidence 99999999999999996 99999999988776544322211011 011122321 34455567
Q ss_pred CCCCHHHHHHcCccceecCC
Q 021410 153 AKLNGAEMMACGLATHYSVS 172 (312)
Q Consensus 153 ~~i~a~eA~~~Glv~~vv~~ 172 (312)
..++|+||+++||||+|+..
T Consensus 200 ~wmtA~EA~eyGliD~Vi~~ 219 (221)
T PRK14514 200 YWMTAQEAKEYGMIDEVLIK 219 (221)
T ss_pred ccCCHHHHHHcCCccEEeec
Confidence 77999999999999999863
No 119
>TIGR00513 accA acetyl-CoA carboxylase, carboxyl transferase, alpha subunit. The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the alpha chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta.
Probab=98.23 E-value=3e-05 Score=69.89 Aligned_cols=138 Identities=12% Similarity=0.039 Sum_probs=91.4
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEE
Q 021410 10 LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV 89 (312)
Q Consensus 10 ~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~I 89 (312)
..+++++-+....+.++.+++- .+-+|-|.-.+++++ |.+.. .......+.+.+..+....+|+|
T Consensus 129 ~G~~~p~g~rKa~R~m~lA~~f-~iPvVtlvDTpGa~~-g~~aE-------------~~G~~~aia~~l~a~s~~~VP~I 193 (316)
T TIGR00513 129 FGMPAPEGYRKALRLMKMAERF-KMPIITFIDTPGAYP-GIGAE-------------ERGQSEAIARNLREMARLGVPVI 193 (316)
T ss_pred CCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEECCCCCC-CHHHH-------------HHHHHHHHHHHHHHHHcCCCCEE
Confidence 4568899999999999988865 355555544433333 22211 11223445566777888999999
Q ss_pred EEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcCh--HHHHHHHhcCCCCCHHHHHHcCccc
Q 021410 90 AILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG--HLGEFLALTGAKLNGAEMMACGLAT 167 (312)
Q Consensus 90 aav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g--~~a~~l~ltg~~i~a~eA~~~Glv~ 167 (312)
+.|-|.|.|||......||++++.+++.++ ++++-|++..+-+--. ..+.+ -..+++.++.+.|+||
T Consensus 194 sVViGeggsGGAla~~~aD~v~m~~~a~~s-------VisPEg~a~Il~kd~~~a~~aae----~~~~ta~~l~~~G~iD 262 (316)
T TIGR00513 194 CTVIGEGGSGGALAIGVGDKVNMLEYSTYS-------VISPEGCAAILWKDASKAPKAAE----AMKITAPDLKELGLID 262 (316)
T ss_pred EEEecccccHHHhhhccCCEEEEecCceEE-------ecCHHHHHHHhccchhhHHHHHH----HccCCHHHHHHCCCCe
Confidence 999999977777555569999999888665 4443444443433211 12222 2567899999999999
Q ss_pred eecCCC
Q 021410 168 HYSVSE 173 (312)
Q Consensus 168 ~vv~~~ 173 (312)
.|+|..
T Consensus 263 ~II~ep 268 (316)
T TIGR00513 263 SIIPEP 268 (316)
T ss_pred EeccCC
Confidence 999843
No 120
>PRK12551 ATP-dependent Clp protease proteolytic subunit; Reviewed
Probab=98.23 E-value=1.5e-05 Score=67.41 Aligned_cols=139 Identities=12% Similarity=0.035 Sum_probs=93.3
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEE
Q 021410 12 ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI 91 (312)
Q Consensus 12 al~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa 91 (312)
.+|.++..++...|..++.++..+-|.|.=. |.|+|+..- ..++..|...+-||...
T Consensus 33 ~i~~~~a~~ii~~Ll~l~~~~~~~~I~l~IN----SpGG~v~~g-------------------~aIyd~m~~~~~~V~t~ 89 (196)
T PRK12551 33 PVTSDSANRIVAQLLFLEAEDPEKDIYLYIN----SPGGSVYDG-------------------LGIFDTMQHVKPDVHTV 89 (196)
T ss_pred eecHHHHHHHHHHHHHhhccCCCCCEEEEEe----CCCcchhhH-------------------HHHHHHHHhcCCCEEEE
Confidence 3688888999999988886543344444333 455555321 23455566788899999
Q ss_pred EccceecccceeecCCCe--EEEeCceeEecCCCcccccCCCchHH----H-----------hhhcChHH---HHHHHhc
Q 021410 92 LNGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASF----Y-----------LSHLPGHL---GEFLALT 151 (312)
Q Consensus 92 v~G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~G~~p~~g~~~----~-----------l~r~~g~~---a~~l~lt 151 (312)
+.|.|.+.|.-|++++|- |++.++++|.+....-|..-...-.. . +.+.-|.. ..+++-.
T Consensus 90 ~~G~AaS~AslIl~aG~~~~R~~~p~a~iMIHqP~~~~~G~a~di~~~a~~l~~~~~~~~~~ya~~tG~~~~~i~~~~~r 169 (196)
T PRK12551 90 CVGLAASMGAFLLCAGAKGKRSSLQHSRIMIHQPLGGARGQASDIRIQADEILFLKERLNTELSERTGQPLERIQEDTDR 169 (196)
T ss_pred EEEEehhHHHHHHhCCCCCceecCCCCEEEEecCCcccCCCcchHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHhhc
Confidence 999999999999999985 88999999888776433221111111 0 11111221 2444555
Q ss_pred CCCCCHHHHHHcCccceecCCC
Q 021410 152 GAKLNGAEMMACGLATHYSVSE 173 (312)
Q Consensus 152 g~~i~a~eA~~~Glv~~vv~~~ 173 (312)
...++|+||+++||||+|++..
T Consensus 170 d~~msa~EA~eyGliD~I~~~~ 191 (196)
T PRK12551 170 DFFMSPSEAVEYGLIDLVIDKR 191 (196)
T ss_pred CcCCCHHHHHHcCCCcEEeccC
Confidence 6679999999999999999764
No 121
>PLN03229 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Probab=98.22 E-value=1.6e-05 Score=77.99 Aligned_cols=139 Identities=12% Similarity=-0.006 Sum_probs=93.6
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEE
Q 021410 10 LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV 89 (312)
Q Consensus 10 ~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~I 89 (312)
..+++++-++...+.++.++... +-+|-|-=.+++++ |.+... ......+.+.+..+....+|+|
T Consensus 220 fG~~~peGyRKAlRlmkLAekfg-LPIVtLVDTpGA~p-G~~AEe-------------~Gq~~aIArnl~amasl~VP~I 284 (762)
T PLN03229 220 FGMPTPHGYRKALRMMYYADHHG-FPIVTFIDTPGAYA-DLKSEE-------------LGQGEAIAHNLRTMFGLKVPIV 284 (762)
T ss_pred CCCCCHHHHHHHHHHHHHHHHcC-CCEEEEEECCCcCC-CchhHH-------------HhHHHHHHHHHHHHhCCCCCEE
Confidence 45678888999999998887653 45555544333332 222211 1233445566777888999999
Q ss_pred EEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHHHHHcCcccee
Q 021410 90 AILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHY 169 (312)
Q Consensus 90 aav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~eA~~~Glv~~v 169 (312)
++|-|.|.|||......||+++|.+++.++ +.++-|++..+-+-... +.+ +-..-.|+|++.+++|+||+|
T Consensus 285 SVViGeggSGGAlA~g~aD~VlMle~A~~s-------VisPEgaAsILwkd~~~-A~e-AAe~lkiTa~dL~~lGiiD~I 355 (762)
T PLN03229 285 SIVIGEGGSGGALAIGCANKLLMLENAVFY-------VASPEACAAILWKSAKA-APK-AAEKLRITAQELCRLQIADGI 355 (762)
T ss_pred EEEeCCcchHHHHHhhcCCEEEEecCCeEE-------ecCHHHHHHHHhcCccc-HHH-HHHHcCCCHHHHHhCCCCeee
Confidence 999999988888777779999999887654 44444444444332221 222 234458899999999999999
Q ss_pred cCC
Q 021410 170 SVS 172 (312)
Q Consensus 170 v~~ 172 (312)
+|.
T Consensus 356 IpE 358 (762)
T PLN03229 356 IPE 358 (762)
T ss_pred ccC
Confidence 984
No 122
>PLN03230 acetyl-coenzyme A carboxylase carboxyl transferase; Provisional
Probab=98.21 E-value=3.1e-05 Score=71.57 Aligned_cols=137 Identities=15% Similarity=0.064 Sum_probs=90.0
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEE
Q 021410 11 NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA 90 (312)
Q Consensus 11 Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Ia 90 (312)
.+++++-+....+.++.++... +-+|-|.=.++++ .|.+.. .......+.+.+..+....+|+|+
T Consensus 200 G~~~peGyRKAlR~mklAekf~-lPIVtLVDTpGA~-pG~~AE-------------e~Gqa~aIAr~l~ams~l~VPiIS 264 (431)
T PLN03230 200 AMPQPNGYRKALRFMRHAEKFG-FPILTFVDTPGAY-AGIKAE-------------ELGQGEAIAFNLREMFGLRVPIIA 264 (431)
T ss_pred CCCCHHHHHHHHHHHHHHHHcC-CCEEEEEeCCCcC-CCHHHH-------------HHhHHHHHHHHHHHHhcCCCCEEE
Confidence 4688999999999999988653 5555554433332 222211 112334455667778899999999
Q ss_pred EEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChH-HHHHHHhcCCCCCHHHHHHcCcccee
Q 021410 91 ILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH-LGEFLALTGAKLNGAEMMACGLATHY 169 (312)
Q Consensus 91 av~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~-~a~~l~ltg~~i~a~eA~~~Glv~~v 169 (312)
.|-|.+.|||......||+++|.+++.++. +.|.++++.++....-. .+.+ .-.++|.++++.|+||+|
T Consensus 265 VViGeGgSGGAlalg~aD~VlMle~A~ysV------isPEgaAsILwkd~~~A~eAAe----alkitA~dL~~~GiID~I 334 (431)
T PLN03230 265 TVIGEGGSGGALAIGCGNRMLMMENAVYYV------ASPEACAAILWKSAAAAPKAAE----ALRITAAELVKLGVVDEI 334 (431)
T ss_pred EEeCCCCcHHHHHhhcCCEEEEecCCEEEe------cCHHHHHHHHhccccchHHHHH----HcCCCHHHHHhCCCCeEe
Confidence 999999666655445689999999876543 22444444333222111 2333 338999999999999999
Q ss_pred cCC
Q 021410 170 SVS 172 (312)
Q Consensus 170 v~~ 172 (312)
+|.
T Consensus 335 I~E 337 (431)
T PLN03230 335 VPE 337 (431)
T ss_pred ccC
Confidence 974
No 123
>PRK14513 ATP-dependent Clp protease proteolytic subunit; Provisional
Probab=98.19 E-value=1.7e-05 Score=67.26 Aligned_cols=137 Identities=15% Similarity=0.136 Sum_probs=92.4
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEE
Q 021410 12 ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI 91 (312)
Q Consensus 12 al~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa 91 (312)
.++.++-+.+...|-.++.++.-+-|.|.=+ |.|+|+.. ...++..|...+-||...
T Consensus 35 ~i~~~~a~~ii~~Ll~L~~~~~~~~I~l~IN----SpGG~v~~-------------------GlaIyd~m~~~~~~V~Ti 91 (201)
T PRK14513 35 PIESQMANTIVAQLLLLDSQNPEQEIQMYIN----CPGGEVYA-------------------GLAIYDTMRYIKAPVSTI 91 (201)
T ss_pred EEcHHHHHHHHHHHHHhhccCCCCCEEEEEE----CCCCchhh-------------------HHHHHHHHHhcCCCEEEE
Confidence 3677788888887777776433232222222 45555432 124555677788899999
Q ss_pred EccceecccceeecCCCe--EEEeCceeEecCCCcccccCCCchHHHh------------------hhcChHH---HHHH
Q 021410 92 LNGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASFYL------------------SHLPGHL---GEFL 148 (312)
Q Consensus 92 v~G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~G~~p~~g~~~~l------------------~r~~g~~---a~~l 148 (312)
+.|.|.+.|.-|++++|- |++.+++++.+.....|. .|...-+ .+.-|.. -.++
T Consensus 92 ~~G~AaS~As~il~aG~kgkR~~~pna~iMIHqp~~~~---~G~a~di~~~a~el~~~~~~l~~iya~~Tg~~~~~I~~~ 168 (201)
T PRK14513 92 CVGIAMSMGSVLLMAGDKGKRMALPNSRIMIHQGSAGF---RGNTPDLEVQAKEVLFLRDTLVDIYHRHTDLPHEKLLRD 168 (201)
T ss_pred EEeeehhhHHHHHhcCCCCcEEecCCeEEEEecCCCCC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHH
Confidence 999999999999999996 999999999988776554 2211111 1111211 2344
Q ss_pred HhcCCCCCHHHHHHcCccceecCCCC
Q 021410 149 ALTGAKLNGAEMMACGLATHYSVSEK 174 (312)
Q Consensus 149 ~ltg~~i~a~eA~~~Glv~~vv~~~~ 174 (312)
+-....++|+||+++||||+|+++..
T Consensus 169 ~~rd~~msa~EA~eyGliD~I~~~~~ 194 (201)
T PRK14513 169 MERDYFMSPEEAKAYGLIDSVIEPTR 194 (201)
T ss_pred hccCcccCHHHHHHcCCCcEEeccCC
Confidence 45566799999999999999997654
No 124
>PRK05724 acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated
Probab=98.16 E-value=3e-05 Score=69.95 Aligned_cols=140 Identities=12% Similarity=0.062 Sum_probs=94.0
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEE
Q 021410 10 LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV 89 (312)
Q Consensus 10 ~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~I 89 (312)
..+++++-++...+.++.+++- ++-+|-|.=.+++++ |.+-. .......+.+.+..+....+|+|
T Consensus 129 ~G~~~peg~rKa~R~m~lA~~f-~lPIVtlvDTpGa~~-G~~aE-------------~~G~~~aia~~l~~~a~~~VP~I 193 (319)
T PRK05724 129 FGMPRPEGYRKALRLMKMAEKF-GLPIITFIDTPGAYP-GIGAE-------------ERGQSEAIARNLREMARLKVPII 193 (319)
T ss_pred CCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEeCCCCCC-CHHHH-------------hccHHHHHHHHHHHHhCCCCCEE
Confidence 4568899999999999888765 356666655444333 32211 11223455567777889999999
Q ss_pred EEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHHHHHcCcccee
Q 021410 90 AILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHY 169 (312)
Q Consensus 90 aav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~eA~~~Glv~~v 169 (312)
+.|-|.|.|||......||++++.+++.|+ ++++-|++..+-+-... +.+.. ....+++.++.+.|+||+|
T Consensus 194 sVIiGeg~sGGAla~~~aD~v~m~~~A~~s-------visPEg~a~Il~~~~~~-a~~aa-e~~~ita~~l~~~g~iD~I 264 (319)
T PRK05724 194 CTVIGEGGSGGALAIGVGDRVLMLEYSTYS-------VISPEGCASILWKDASK-APEAA-EAMKITAQDLKELGIIDEI 264 (319)
T ss_pred EEEeCCccHHHHHHHhccCeeeeecCceEe-------ecCHHHHHHHHhcCchh-HHHHH-HHcCCCHHHHHHCCCceEe
Confidence 999999987776555569999988877654 44444444444443222 22222 2456899999999999999
Q ss_pred cCCC
Q 021410 170 SVSE 173 (312)
Q Consensus 170 v~~~ 173 (312)
+|..
T Consensus 265 I~Ep 268 (319)
T PRK05724 265 IPEP 268 (319)
T ss_pred ccCC
Confidence 9743
No 125
>TIGR03133 malonate_beta malonate decarboxylase, beta subunit. Members of this protein family are the beta subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase.
Probab=98.02 E-value=0.00012 Score=64.93 Aligned_cols=140 Identities=12% Similarity=0.073 Sum_probs=87.6
Q ss_pred CCCCCCHHHHHHHHHHHHHhhcCC----CceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhC
Q 021410 9 ALNALNTNMGAKLNKLFKAWENDP----NIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTH 84 (312)
Q Consensus 9 ~~Nal~~~~~~~L~~~l~~~~~d~----~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 84 (312)
..-+++...-..+.++++.+.+|. .+-+|.|.-. .|+.+.+-. ..+..+.+. ......+...
T Consensus 71 ~GGS~G~~~g~Ki~r~~e~A~~~~~~~~~~PvV~l~dS-----gGaRlqEg~--------~~L~~~a~i-~~~~~~ls~~ 136 (274)
T TIGR03133 71 QGGSVGEVHGAKIVGALRLAIEDNRKGQPTAVVLLLDT-----GGVRLQEAN--------AGLIAIAEI-MRAILDARAA 136 (274)
T ss_pred cCcCCCHHHHHHHHHHHHHHHhhhhccCCCCEEEEEcC-----CCcChhhhH--------HHHHHHHHH-HHHHHHHhCC
Confidence 345677777788888888887622 2346666554 344443211 111122221 2222333344
Q ss_pred CCcEEEEEccc--eecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChH--H-HHHHHhcCCCCCHHH
Q 021410 85 LKPHVAILNGV--TMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH--L-GEFLALTGAKLNGAE 159 (312)
Q Consensus 85 ~kp~Iaav~G~--a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~--~-a~~l~ltg~~i~a~e 159 (312)
+|+|+.|.|+ |.||+..++..||++|+++++++++.- ........|. . ..+-.|.-+.+.+..
T Consensus 137 -vP~Isvv~Gp~gc~GG~a~~a~l~D~vim~~~a~i~~aG-----------P~VIe~~~G~e~~~~~d~~l~~~~lGG~~ 204 (274)
T TIGR03133 137 -VPVIGVIGGRVGCFGGMGIAAGLCSYLIMTEEGRLGLSG-----------PEVIEQEAGVEEFDSRDRALVWRTTGGKH 204 (274)
T ss_pred -CCEEEEEeCCCCcchHHHHHHhcCCEEEEeCCcEEeccC-----------HHHHHHhcCCCccCHHHhcccccccchHh
Confidence 9999999999 899999999999999999987776621 1112222331 2 444445556677778
Q ss_pred HHHcCccceecCCCC
Q 021410 160 MMACGLATHYSVSEK 174 (312)
Q Consensus 160 A~~~Glv~~vv~~~~ 174 (312)
.+..|++|.+++++.
T Consensus 205 ~~~sG~~D~~v~dd~ 219 (274)
T TIGR03133 205 RFLSGDADVLVEDDV 219 (274)
T ss_pred HhhcccceEEeCCHH
Confidence 888999999998754
No 126
>PRK11778 putative inner membrane peptidase; Provisional
Probab=98.00 E-value=4.3e-05 Score=69.43 Aligned_cols=97 Identities=13% Similarity=0.092 Sum_probs=65.1
Q ss_pred HHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCc------------ccccCC---------Cch----
Q 021410 79 YLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETL------------IGFHPD---------AGA---- 133 (312)
Q Consensus 79 ~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~------------~G~~p~---------~g~---- 133 (312)
.++...+||+|+.+++.|..||+.++++||-++|.+.+.++...+- +|+-+. .+.
T Consensus 148 ~~lr~~~kpVva~v~~~AASggY~iAsaAD~I~A~P~a~vGSIGVi~~~~~~~~lLeKlGI~~evi~aG~yK~a~~pf~~ 227 (330)
T PRK11778 148 QRLRDAGIPLTVAVDKVAASGGYMMACVADKIIAAPFAIVGSIGVVAQIPNFHRLLKKHDIDVELHTAGEYKRTLTLFGE 227 (330)
T ss_pred HHHHhcCCCEEEEECCchhhHHHHHHHhCCEEEECCCCeEEeeeeeeeccCHHHHHHHCCCceEEEEecCccCCCCCCCC
Confidence 3455678999999999999999999999999999998876654332 222100 000
Q ss_pred -H----HHhhhcC---------------hHHHHHHHhcCCCCCHHHHHHcCccceecCCCCh
Q 021410 134 -S----FYLSHLP---------------GHLGEFLALTGAKLNGAEMMACGLATHYSVSEKL 175 (312)
Q Consensus 134 -~----~~l~r~~---------------g~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l 175 (312)
+ ..+...+ +..-.+-+.+|+.++|++|++.||||++...+++
T Consensus 228 ~see~Re~~q~~Ld~~y~~F~~~Va~~R~~l~~~~va~G~v~~g~~Al~~GLVD~Ig~~dd~ 289 (330)
T PRK11778 228 NTEEGREKFREELEETHQLFKDFVQRYRPQLDIDKVATGEHWYGQQALELGLVDEIQTSDDY 289 (330)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHhCCCcCHHHHHHCCCCCcCCCHHHH
Confidence 0 0011111 1111223468999999999999999999765544
No 127
>PRK07189 malonate decarboxylase subunit beta; Reviewed
Probab=98.00 E-value=0.00017 Score=64.71 Aligned_cols=140 Identities=14% Similarity=0.141 Sum_probs=84.1
Q ss_pred CCCCCCHHHHHHHHHHHHHhhcCC----CceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhC
Q 021410 9 ALNALNTNMGAKLNKLFKAWENDP----NIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTH 84 (312)
Q Consensus 9 ~~Nal~~~~~~~L~~~l~~~~~d~----~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 84 (312)
..-+++......+..+++.+.++. .+-+|.|.-.| |+-+.+-. .....+.+ +...+..+...
T Consensus 80 ~GGS~G~~~g~Ki~r~~e~A~~~~~~~~~~PvV~l~dSG-----GaRlqEg~--------~~L~~~a~-i~~~~~~ls~~ 145 (301)
T PRK07189 80 MGGSVGEVHGAKLAGALELAAEDNRNGIPTAVLLLFETG-----GVRLQEAN--------AGLAAIAE-IMRAIVDLRAA 145 (301)
T ss_pred cCcCcCHHHHHHHHHHHHHHHHhCCCCCCCCEEEEecCC-----CcCccchH--------HHHHHHHH-HHHHHHHHhCC
Confidence 345677888888999998887764 25566665543 33343211 11111222 12222334444
Q ss_pred CCcEEEEEccc--eecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcCh--HH-HHHHHhcCCCCCHHH
Q 021410 85 LKPHVAILNGV--TMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG--HL-GEFLALTGAKLNGAE 159 (312)
Q Consensus 85 ~kp~Iaav~G~--a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g--~~-a~~l~ltg~~i~a~e 159 (312)
+|+|+.|.|. |+||+...+.+||++|+++++++++.- ........| .. ..+..+..+.+.+..
T Consensus 146 -VP~I~vv~G~~gc~GG~a~~a~l~D~iIm~~~a~iglaG-----------P~VIe~~~G~e~~d~~d~~~vw~~lGG~h 213 (301)
T PRK07189 146 -VPVIGLIGGRVGCFGGMGIAAALCSYLIVSEEGRLGLSG-----------PEVIEQEAGVEEFDSRDRALVWRTTGGKH 213 (301)
T ss_pred -CCEEEEEcCCCCCcHHHHHHHhcCCEEEEECCcEEeccC-----------HHHHHHhcCCcccCHHHhcccccccCcce
Confidence 9999999999 999999999999999999988776621 111111122 11 333333223333345
Q ss_pred HHHcCccceecCCCC
Q 021410 160 MMACGLATHYSVSEK 174 (312)
Q Consensus 160 A~~~Glv~~vv~~~~ 174 (312)
....|.+|.+++++.
T Consensus 214 ~~~sG~~D~~v~dd~ 228 (301)
T PRK07189 214 RYLSGLADALVDDDV 228 (301)
T ss_pred eeecccceEEeCCHH
Confidence 566999999998654
No 128
>TIGR03134 malonate_gamma malonate decarboxylase, gamma subunit. Members of this protein family are the gamma subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=97.86 E-value=0.00072 Score=58.91 Aligned_cols=147 Identities=13% Similarity=0.038 Sum_probs=88.2
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHh-hcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH---H
Q 021410 5 NRPSALNALNTNMGAKLNKLFKAW-ENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY---L 80 (312)
Q Consensus 5 n~p~~~Nal~~~~~~~L~~~l~~~-~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 80 (312)
|+|.. .++.+-...+.+.+... +.++++-+|.|.=. .|..+.. .++.......+-++.. .
T Consensus 39 ~~~~~--~~g~~~~~k~A~~v~~~~d~~f~~PIv~lvDt-----pG~~~g~---------~aE~~G~~~a~A~l~~a~a~ 102 (238)
T TIGR03134 39 VVPDA--EVGLDEALALAQAVLDVIEADDKRPIVVLVDT-----PSQAYGR---------REELLGINQALAHLAKALAL 102 (238)
T ss_pred ECCCC--cCChHHHHHHHHHHHHHHHhcCCCCEEEEEeC-----CCCCCCH---------HHHHHHHHHHHHHHHHHHHH
Confidence 44442 68878888888888885 55566666666543 2322221 1122222333333333 4
Q ss_pred HhhCCCcEEEEEccceecccce-eecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhc--CCCCCH
Q 021410 81 LGTHLKPHVAILNGVTMGGGAG-VSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALT--GAKLNG 157 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~-lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~lt--g~~i~a 157 (312)
....+.|+|+.|-|.+.|||+. +.+.+|.++|- |...++..++-+++..+.+-... ..++.-+ -...+.
T Consensus 103 a~~~~vP~IsvI~g~a~ggg~lamg~~ad~v~Al-------p~A~i~vm~~e~aa~I~~~~~~~-~~e~a~~~~~~a~~~ 174 (238)
T TIGR03134 103 ARLAGHPVIGLIYGKAISGAFLAHGLQADRIIAL-------PGAMVHVMDLESMARVTKRSVEE-LEALAKSSPVFAPGI 174 (238)
T ss_pred hhcCCCCEEEEEeCCccHHHHHHHccCcCeEEEc-------CCcEEEecCHHHHHHHHccCHhH-HHHHHHhhhhhccCH
Confidence 4456699999999999988754 44457777666 55556666666555555444332 2222111 123577
Q ss_pred HHHHHcCccceecCCCCh
Q 021410 158 AEMMACGLATHYSVSEKL 175 (312)
Q Consensus 158 ~eA~~~Glv~~vv~~~~l 175 (312)
+.+.+.|+||.|+++.+-
T Consensus 175 ~~~~~~G~vd~vi~~~~~ 192 (238)
T TIGR03134 175 ENFVKLGGVHALLDVADA 192 (238)
T ss_pred HHHHhCCCccEEeCCCCc
Confidence 889999999999987664
No 129
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=97.83 E-value=0.00025 Score=62.03 Aligned_cols=97 Identities=15% Similarity=0.168 Sum_probs=77.0
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEE
Q 021410 11 NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA 90 (312)
Q Consensus 11 Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Ia 90 (312)
+.++.+....+.++++....+..+-. +|. +.|+++.. ..++...+.+.+.|+++
T Consensus 70 ~~I~i~dse~v~raI~~~~~~~~IdL-ii~------TpGG~v~A-------------------A~~I~~~l~~~~~~v~v 123 (285)
T PF01972_consen 70 RYIDIDDSEFVLRAIREAPKDKPIDL-IIH------TPGGLVDA-------------------AEQIARALREHPAKVTV 123 (285)
T ss_pred eeEcHhhHHHHHHHHHhcCCCCceEE-EEE------CCCCcHHH-------------------HHHHHHHHHhCCCCEEE
Confidence 45788888999999998877655533 333 45555532 12455567789999999
Q ss_pred EEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCch
Q 021410 91 ILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGA 133 (312)
Q Consensus 91 av~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~ 133 (312)
.|+..|+.+|.-++++||-+++++.+.+|--..++|-.|..+.
T Consensus 124 ~VP~~A~SAGTlIALaADeIvM~p~a~LGpiDPqi~~~pA~si 166 (285)
T PF01972_consen 124 IVPHYAMSAGTLIALAADEIVMGPGAVLGPIDPQIGQYPAASI 166 (285)
T ss_pred EECcccccHHHHHHHhCCeEEECCCCccCCCCccccCCChHHH
Confidence 9999999999999999999999999999999999999886543
No 130
>PRK05654 acetyl-CoA carboxylase subunit beta; Validated
Probab=97.75 E-value=0.00077 Score=60.54 Aligned_cols=146 Identities=15% Similarity=0.143 Sum_probs=91.6
Q ss_pred ecCCC-CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHh
Q 021410 4 LNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLG 82 (312)
Q Consensus 4 ln~p~-~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 82 (312)
-|+|. ...+++...-..+.++++.+.+. .+-+|.|.-.| |+.+.+ + ...+.++ ......+..+.
T Consensus 127 a~D~~f~gGS~g~~~~eKi~r~~e~A~~~-~lPlV~l~dsg-----GarmqE-------g-i~sL~~~-ak~~~a~~~~~ 191 (292)
T PRK05654 127 VMDFSFMGGSMGSVVGEKIVRAVERAIEE-KCPLVIFSASG-----GARMQE-------G-LLSLMQM-AKTSAALKRLS 191 (292)
T ss_pred EEecccccCCccHHHHHHHHHHHHHHHHc-CCCEEEEEcCC-----Ccchhh-------h-hhHHHhH-HHHHHHHHHHH
Confidence 34443 56789999999999999998776 46777777654 332221 0 1111122 12223344455
Q ss_pred hCCCcEEEEEccceecccce-eecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHHHH
Q 021410 83 THLKPHVAILNGVTMGGGAG-VSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMM 161 (312)
Q Consensus 83 ~~~kp~Iaav~G~a~GgG~~-lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~eA~ 161 (312)
...+|.|+.+.|+|.||+.. +++.+|++||.+++.+++--.+ .+...++ .++ .-+.=+++-+.
T Consensus 192 ~a~vP~IsVv~gpt~GG~aas~a~~~D~iia~p~A~ig~aGpr-----------vie~~~~---e~l--pe~~~~ae~~~ 255 (292)
T PRK05654 192 EAGLPYISVLTDPTTGGVSASFAMLGDIIIAEPKALIGFAGPR-----------VIEQTVR---EKL--PEGFQRAEFLL 255 (292)
T ss_pred cCCCCEEEEEeCCCchHHHHHHHHcCCEEEEecCcEEEecCHH-----------HHHhhhh---hhh--hhhhcCHHHHH
Confidence 67899999999999999654 5778999999988877663221 0111111 111 11122566677
Q ss_pred HcCccceecCCCChhHHHH
Q 021410 162 ACGLATHYSVSEKLPLIEE 180 (312)
Q Consensus 162 ~~Glv~~vv~~~~l~~~~~ 180 (312)
+.|+||.|+++.++.....
T Consensus 256 ~~G~vD~Vv~~~e~r~~l~ 274 (292)
T PRK05654 256 EHGAIDMIVHRRELRDTLA 274 (292)
T ss_pred hCCCCcEEECHHHHHHHHH
Confidence 8999999999988765433
No 131
>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type. E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both.
Probab=97.74 E-value=0.0002 Score=70.66 Aligned_cols=85 Identities=13% Similarity=-0.062 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEccc
Q 021410 16 NMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGV 95 (312)
Q Consensus 16 ~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~ 95 (312)
-.+.++.++++.+..|+.|++|||.-.+ +.|.++..+ +.+++.+..+....|||||..+++
T Consensus 76 ~~l~~i~~~i~~A~~D~~IkgIvL~i~~---~~g~~~~~~----------------~ei~~ai~~fk~sgKpVvA~~~~~ 136 (584)
T TIGR00705 76 ISLFDIVNAIRQAADDRRIEGLVFDLSN---FSGWDSPHL----------------VEIGSALSEFKDSGKPVYAYGTNY 136 (584)
T ss_pred cCHHHHHHHHHHHhcCCCceEEEEEccC---CCCCCHHHH----------------HHHHHHHHHHHhcCCeEEEEEccc
Confidence 3567999999999999999999998753 124443321 223344455566799999988877
Q ss_pred eecccceeecCCCeEEEeCceeEec
Q 021410 96 TMGGGAGVSIPGTFRVACGKTVFAT 120 (312)
Q Consensus 96 a~GgG~~lal~~D~~ia~~~a~f~~ 120 (312)
+ -+|+.|+.+||-+++.+.+.+++
T Consensus 137 ~-s~~YylAs~AD~I~~~p~G~v~~ 160 (584)
T TIGR00705 137 S-QGQYYLASFADEIILNPMGSVDL 160 (584)
T ss_pred c-chhhhhhhhCCEEEECCCceEEe
Confidence 5 67899999999999999877755
No 132
>PF01343 Peptidase_S49: Peptidase family S49 peptidase classification.; InterPro: IPR002142 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S49 (protease IV family, clan S-). The predicted active site serine for members of this family occurs in a transmembrane domain. The domain defines sequences in viruses, archaea, bacteria and plants. These sequences are variously annotated in the different taxonomic groups, examples are: Viruses: capsid protein Archaea: proteinase IV homolog Bacteria: proteinase IV, sohB, SppA, pfaP, putative protease Plants: SppA, protease IV This group also contains proteins classified as non-peptidase homologues that either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity of peptidases. Related proteins, non-peptidase homologs and unclassified S49 members are also to be found in IPR002810 from INTERPRO.; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3RST_B 3BEZ_D 3BF0_A.
Probab=97.74 E-value=1.9e-05 Score=64.50 Aligned_cols=94 Identities=17% Similarity=0.108 Sum_probs=58.3
Q ss_pred hhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCc------------ccc---------cCCCc-----hH-
Q 021410 82 GTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETL------------IGF---------HPDAG-----AS- 134 (312)
Q Consensus 82 ~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~------------~G~---------~p~~g-----~~- 134 (312)
....|||||.++|.+..+|+.++.+||-+++.+.+.++..-+. +|+ ....+ .+
T Consensus 3 ~~~~KpV~a~~~~~~~S~~Y~lAs~ad~I~~~p~s~vgsiGv~~~~~~~~~~l~k~GV~~~~~~~g~~K~~~~~~~~~s~ 82 (154)
T PF01343_consen 3 KASGKPVVAYAEGYAASGAYYLASAADEIYANPSSSVGSIGVSAERLFFKGLLEKLGVKVEVVRSGEYKSAGFPRDPMSE 82 (154)
T ss_dssp HHTT--EEEEEEEEEETHHHHHHTTSSEEEE-TT-EEE---EEEEEEE-HHHHHHTT-EEEEEESSTTCCCCCTTSS--H
T ss_pred cccCCeEEEEECCcchhHHHHHHHcCCEEEecCCCEEEEeChhhccccHHHHHHHCCCeEEEEecCccccccCcCCCCCH
Confidence 4679999999999999999999999999999998877664432 222 11111 00
Q ss_pred ---HHhhhcC-----------------hHHHHHHHhcCCCCCHHHHHHcCccceecCCCCh
Q 021410 135 ---FYLSHLP-----------------GHLGEFLALTGAKLNGAEMMACGLATHYSVSEKL 175 (312)
Q Consensus 135 ---~~l~r~~-----------------g~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l 175 (312)
..+.+++ .....+-+..|..+++++|++.||||++...+++
T Consensus 83 ~~r~~~~~~l~~~~~~f~~~Va~~R~~~~~~v~~~~~~~~~~~~~A~~~GLiD~i~~~~~~ 143 (154)
T PF01343_consen 83 EERENLQELLDELYDQFVNDVAEGRGLSPDDVEEIADGGVFTAQQALELGLIDEIGTFDEA 143 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTS-HHHHHCHHCCHEEEHHHHHHTTSSSEETSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHhhccccHHHHHHcCchhhcCCHHHH
Confidence 0111111 1111222468999999999999999999754444
No 133
>TIGR00515 accD acetyl-CoA carboxylase, carboxyl transferase, beta subunit. The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the beta chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta.
Probab=97.63 E-value=0.00093 Score=59.74 Aligned_cols=141 Identities=13% Similarity=0.153 Sum_probs=89.6
Q ss_pred CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcE
Q 021410 9 ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPH 88 (312)
Q Consensus 9 ~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~ 88 (312)
..-+++......+.++++.+.+. .+-+|.|.-.|++ -+.+ + ...+.++. .....+..+....+|.
T Consensus 132 ~gGSmg~~~geKi~r~~e~A~~~-~lPlV~l~dSgGa-----RmqE-------g-~~sL~~~a-k~~~~~~~~~~~~vP~ 196 (285)
T TIGR00515 132 MGGSMGSVVGEKFVRAIEKALED-NCPLIIFSASGGA-----RMQE-------A-LLSLMQMA-KTSAALAKMSERGLPY 196 (285)
T ss_pred cCCCccHHHHHHHHHHHHHHHHc-CCCEEEEEcCCCc-----cccc-------c-hhHHHhHH-HHHHHHHHHHcCCCCE
Confidence 45678899999999999988765 4677777765443 2211 1 11111221 1222334455678999
Q ss_pred EEEEccceecccce-eecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHHHHHcCccc
Q 021410 89 VAILNGVTMGGGAG-VSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLAT 167 (312)
Q Consensus 89 Iaav~G~a~GgG~~-lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~eA~~~Glv~ 167 (312)
|+.+-|+|.||+.. +++.+|++||.+++.+++--.++ +...+| .+ +.-+.=+++-+.+.|+||
T Consensus 197 IsVv~gpt~GG~aas~a~~~D~iia~p~A~ig~aGprV-----------ie~ti~---e~--lpe~~q~ae~~~~~G~vD 260 (285)
T TIGR00515 197 ISVLTDPTTGGVSASFAMLGDLNIAEPKALIGFAGPRV-----------IEQTVR---EK--LPEGFQTSEFLLEHGAID 260 (285)
T ss_pred EEEEeCCcchHHHHHHHhCCCEEEEECCeEEEcCCHHH-----------HHHHhc---Cc--cchhcCCHHHHHhCCCCc
Confidence 99999999999644 56799999999998887733221 111111 11 111122556677899999
Q ss_pred eecCCCChhHHHH
Q 021410 168 HYSVSEKLPLIEE 180 (312)
Q Consensus 168 ~vv~~~~l~~~~~ 180 (312)
.|+++.++.....
T Consensus 261 ~iv~~~~~r~~l~ 273 (285)
T TIGR00515 261 MIVHRPEMKKTLA 273 (285)
T ss_pred EEECcHHHHHHHH
Confidence 9999988765433
No 134
>COG1030 NfeD Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones]
Probab=97.58 E-value=0.00055 Score=63.75 Aligned_cols=138 Identities=12% Similarity=0.170 Sum_probs=99.1
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEE
Q 021410 11 NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA 90 (312)
Q Consensus 11 Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Ia 90 (312)
+.+++.+.+.+.+.++.++++.. .+|||.=. ..| .+.+.+.++...+.+.+.||+.
T Consensus 35 g~I~~~s~~~l~r~l~~A~~~~a-~~vvl~ld----TPG-------------------Gl~~sm~~iv~~i~~s~vPV~~ 90 (436)
T COG1030 35 GAIDPASADYLQRALQSAEEENA-AAVVLELD----TPG-------------------GLLDSMRQIVRAILNSPVPVIG 90 (436)
T ss_pred CccCHHHHHHHHHHHHHHHhCCC-cEEEEEec----CCC-------------------chHHHHHHHHHHHHcCCCCEEE
Confidence 56899999999999999987752 33443221 001 1335566788899999999988
Q ss_pred EE---ccceecccceeecCCCeEEEeCceeEecCCCcccc--cC-CCc-hHHH------hhhcChH--H-HHHHHhcCCC
Q 021410 91 IL---NGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGF--HP-DAG-ASFY------LSHLPGH--L-GEFLALTGAK 154 (312)
Q Consensus 91 av---~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~--~p-~~g-~~~~------l~r~~g~--~-a~~l~ltg~~ 154 (312)
.| .+.|..+|..++++||+..|.+.+.+|-...-.+- .+ ... .... +.+.-|+ . +.+++.....
T Consensus 91 yv~p~ga~AaSAGtyI~m~~hiaaMAPgT~iGaa~Pi~~~g~~~~~~~~~n~~~ay~~~~A~~~gRN~~~ae~~v~~~~~ 170 (436)
T COG1030 91 YVVPDGARAASAGTYILMATHIAAMAPGTNIGAATPIAGGGTSAKEANTTNAAVAYIRSLAEERGRNPTWAERFVTENLS 170 (436)
T ss_pred EEcCCCcchhchhhHHHHhcChhhhCCCCcccccceecCCCCCccchhhHHHHHHHHHHHHHHcCCChHHHHHHhhhccC
Confidence 88 44699999999999999999999998876543222 11 111 1122 2233344 3 7889999999
Q ss_pred CCHHHHHHcCccceecCC
Q 021410 155 LNGAEMMACGLATHYSVS 172 (312)
Q Consensus 155 i~a~eA~~~Glv~~vv~~ 172 (312)
++++||++.|++|-+..+
T Consensus 171 l~a~eA~~~~vid~iA~~ 188 (436)
T COG1030 171 LTAEEALRQGVIDLIARD 188 (436)
T ss_pred CChhHHHhcCccccccCC
Confidence 999999999999988753
No 135
>COG0740 ClpP Protease subunit of ATP-dependent Clp proteases [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=97.55 E-value=0.00067 Score=56.99 Aligned_cols=97 Identities=15% Similarity=0.050 Sum_probs=66.4
Q ss_pred HHHHHHhhCCCcEEEEEccceecccceeecCCCeE--EEeCceeEecCCCcccccCCCchHHH--hhh-c----------
Q 021410 76 SFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFR--VACGKTVFATPETLIGFHPDAGASFY--LSH-L---------- 140 (312)
Q Consensus 76 ~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~--ia~~~a~f~~pe~~~G~~p~~g~~~~--l~r-~---------- 140 (312)
.++..|...+.||...+-|.|...|.-|++++|-. ++.+++++.+.-..-|+ -+. ++-. -.+ +
T Consensus 76 AIydtm~~ik~~V~ti~~G~AaSmgs~l~~aG~~g~r~~lPnsrimIHqP~gg~-~G~-a~Di~i~A~ei~~~~~~l~~i 153 (200)
T COG0740 76 AIYDTMQFIKPPVSTICMGQAASMGSVLLMAGDKGKRFALPNARIMIHQPSGGA-QGQ-ASDIEIHAREILKIKERLNRI 153 (200)
T ss_pred HHHHHHHhcCCCeEEEEecHHHhHHHHHHhcCCCCCceeCCCceEEEecCCccC-ccC-HHHHHHHHHHHHHHHHHHHHH
Confidence 45566778999999999999999999999999986 88888888776665332 111 1110 000 0
Q ss_pred ----ChHH---HHHHHhcCCCCCHHHHHHcCccceecCCCC
Q 021410 141 ----PGHL---GEFLALTGAKLNGAEMMACGLATHYSVSEK 174 (312)
Q Consensus 141 ----~g~~---a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~ 174 (312)
-|.. -....-....++|+||+++||+|+|+...+
T Consensus 154 ~a~~TGq~~e~i~~d~drd~~msa~eA~~yGLiD~V~~~~~ 194 (200)
T COG0740 154 YAEHTGQTLEKIEKDTDRDTWMSAEEAKEYGLIDKVIESRE 194 (200)
T ss_pred HHHHcCCCHHHHHHhhcccccCCHHHHHHcCCcceeccccc
Confidence 1111 122233455699999999999999997654
No 136
>CHL00174 accD acetyl-CoA carboxylase beta subunit; Reviewed
Probab=97.50 E-value=0.0019 Score=57.70 Aligned_cols=141 Identities=14% Similarity=0.144 Sum_probs=84.4
Q ss_pred CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH-HhhCCCc
Q 021410 9 ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL-LGTHLKP 87 (312)
Q Consensus 9 ~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~kp 87 (312)
..-+++...-..+.++++.+.+.. +-+|++..+| |+-+.+- ...+.++.+. ...+.. ...-.+|
T Consensus 145 ~gGSmG~v~geKi~ra~e~A~~~r-lPlV~l~~SG-----GARmQEg--------~~sL~qmak~-saa~~~~~~~~~vP 209 (296)
T CHL00174 145 MGGSMGSVVGEKITRLIEYATNES-LPLIIVCASG-----GARMQEG--------SLSLMQMAKI-SSALYDYQSNKKLF 209 (296)
T ss_pred cccCcCHHHHHHHHHHHHHHHHcC-CCEEEEECCC-----Ccccccc--------chhhhhhHHH-HHHHHHHHHcCCCC
Confidence 345678888889999998887654 6677777643 4443321 1111122111 111222 2245799
Q ss_pred EEEEEccceeccccee-ecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHHHHHcCcc
Q 021410 88 HVAILNGVTMGGGAGV-SIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLA 166 (312)
Q Consensus 88 ~Iaav~G~a~GgG~~l-al~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~eA~~~Glv 166 (312)
.|+.+.|+|.||+... ++.||++|+.+++.+++.-.++ ....+|. . +.-..=+++-.++.|+|
T Consensus 210 ~Isvl~gPt~GG~aas~a~l~Diiiae~~A~IgfAGPrV-----------Ie~t~ge---~--lpe~fq~ae~l~~~G~v 273 (296)
T CHL00174 210 YISILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKRV-----------IEQTLNK---T--VPEGSQAAEYLFDKGLF 273 (296)
T ss_pred EEEEEcCCCchHHHHHHHHcccEEEEeCCeEEEeeCHHH-----------HHHhcCC---c--CCcccccHHHHHhCcCc
Confidence 9999999999998665 6679999998787765532210 0001110 0 01111246667789999
Q ss_pred ceecCCCChhHHHH
Q 021410 167 THYSVSEKLPLIEE 180 (312)
Q Consensus 167 ~~vv~~~~l~~~~~ 180 (312)
|.+|+..++.....
T Consensus 274 D~iV~r~~lr~~l~ 287 (296)
T CHL00174 274 DLIVPRNLLKGVLS 287 (296)
T ss_pred eEEEcHHHHHHHHH
Confidence 99999888765433
No 137
>PRK12552 ATP-dependent Clp protease-like protein; Reviewed
Probab=97.40 E-value=0.00097 Score=57.26 Aligned_cols=142 Identities=15% Similarity=0.090 Sum_probs=87.7
Q ss_pred CCHHHHHHHHHHHHHhhcCCCce--EEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEE
Q 021410 13 LNTNMGAKLNKLFKAWENDPNIG--FVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA 90 (312)
Q Consensus 13 l~~~~~~~L~~~l~~~~~d~~v~--~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Ia 90 (312)
.+.++.+.+...+-.++.++..+ -+-|-+.|+...+|-=+.. ......++..|...+-||..
T Consensus 49 ~~~~~a~~iiaqLl~L~~~~~~k~I~lyINSpGGsv~~G~~iG~----------------v~~glaIyD~m~~ik~~V~T 112 (222)
T PRK12552 49 VGMDVTELIIAQLLYLEFDDPEKPIYFYINSTGTSWYTGDAIGF----------------ETEAFAICDTMRYIKPPVHT 112 (222)
T ss_pred hhHhHHHHHHHHHHHHhccCCCCCEEEEEeCCCCCccccccccc----------------cccHHHHHHHHHhcCCCeEE
Confidence 34447777777777776543222 2334444544444411110 01122445556677888999
Q ss_pred EEccceecccceeecCCCe--EEEeCceeEecCCCcccccCCCchHHHhhh------------------cChHH---HHH
Q 021410 91 ILNGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASFYLSH------------------LPGHL---GEF 147 (312)
Q Consensus 91 av~G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r------------------~~g~~---a~~ 147 (312)
.+-|.|.+.+.-|++++|- |++.++++|.+.....|.. |.+.-+.. .-|.. -.+
T Consensus 113 v~~G~AaS~AslIl~aG~kg~R~alpns~iMIHqP~~~~~---G~A~di~~~a~el~~~r~~l~~iya~~TG~~~e~I~~ 189 (222)
T PRK12552 113 ICIGQAMGTAAMILSAGTKGQRASLPHATIVLHQPRSGAR---GQATDIQIRAKEVLHNKRTMLEILSRNTGQTVEKLSK 189 (222)
T ss_pred EEEeehhhHHHHHHhCCCCCceecCCCcEEEeccCCcccc---cCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Confidence 9999999999999999995 9999999998877765532 22221110 11111 122
Q ss_pred HHhcCCCCCHHHHHHcCccceecCCC
Q 021410 148 LALTGAKLNGAEMMACGLATHYSVSE 173 (312)
Q Consensus 148 l~ltg~~i~a~eA~~~Glv~~vv~~~ 173 (312)
.+-.-..++|+||+++||||+|+.+.
T Consensus 190 d~~rd~wmsA~EA~eyGliD~Ii~~~ 215 (222)
T PRK12552 190 DTDRMFYLTPQEAKEYGLIDRVLESR 215 (222)
T ss_pred HhcCCCcCCHHHHHHcCCCcEEeccC
Confidence 33344559999999999999999653
No 138
>PRK10949 protease 4; Provisional
Probab=97.27 E-value=0.0021 Score=63.77 Aligned_cols=86 Identities=15% Similarity=0.024 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEccc
Q 021410 16 NMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGV 95 (312)
Q Consensus 16 ~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~ 95 (312)
-.+.++.++++.+..||.|++|||.-.+. .|..+.. .+.+++.+..+....|||||.-+.+
T Consensus 95 ~~l~div~~i~~Aa~D~rIkgivL~i~s~---gG~~~a~----------------~~eI~~ai~~fk~sGKpVvA~~~~~ 155 (618)
T PRK10949 95 NSLFDIVNTIRQAKDDRNITGIVLDLKNF---AGADQPS----------------MQYIGKALREFRDSGKPVYAVGDSY 155 (618)
T ss_pred ccHHHHHHHHHHHhcCCCceEEEEEeCCC---CCccHHH----------------HHHHHHHHHHHHHhCCeEEEEecCc
Confidence 34568999999999999999999988632 1222211 1223344455566789999864444
Q ss_pred eecccceeecCCCeEEEeCceeEecC
Q 021410 96 TMGGGAGVSIPGTFRVACGKTVFATP 121 (312)
Q Consensus 96 a~GgG~~lal~~D~~ia~~~a~f~~p 121 (312)
--+|+.|+.+||-+++.+.+.+++.
T Consensus 156 -~s~~YyLASaAD~I~l~P~G~v~~~ 180 (618)
T PRK10949 156 -SQGQYYLASFANKIYLSPQGVVDLH 180 (618)
T ss_pred -cchhhhhhhhCCEEEECCCceEEEe
Confidence 4578999999999999998766543
No 139
>TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit. This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane.
Probab=97.24 E-value=0.0071 Score=58.82 Aligned_cols=152 Identities=16% Similarity=0.135 Sum_probs=95.0
Q ss_pred ecCCC-CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHh
Q 021410 4 LNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLG 82 (312)
Q Consensus 4 ln~p~-~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 82 (312)
-|+|. ...+++++-.....+.++.+.+. .+-+|.|.-.++ |..|.+- +........-+++..+.
T Consensus 321 And~~~~~G~~~~~~~~K~~r~i~~a~~~-~lPlV~lvDs~G-~~~g~~~-------------E~~g~~~~~a~~~~a~~ 385 (512)
T TIGR01117 321 ANQPKVMAGCLDIDSSDKIARFIRFCDAF-NIPIVTFVDVPG-FLPGVNQ-------------EYGGIIRHGAKVLYAYS 385 (512)
T ss_pred EeccccccCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEeCcC-ccccHHH-------------HHHHHHHHHHHHHHHHH
Confidence 34543 34569999999999999988764 466666655444 4444321 11223344556777788
Q ss_pred hCCCcEEEEEccceecccceeec----CCCeEEEeCceeEecCCCcccccCCCchHHHhhh-cCh----HH-H-HH-H-H
Q 021410 83 THLKPHVAILNGVTMGGGAGVSI----PGTFRVACGKTVFATPETLIGFHPDAGASFYLSH-LPG----HL-G-EF-L-A 149 (312)
Q Consensus 83 ~~~kp~Iaav~G~a~GgG~~lal----~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r-~~g----~~-a-~~-l-~ 149 (312)
...+|.|+.|-|.+.|||+.-.. .+|+++|.++++++ +.++-++...+-+ .+. .. + .+ + -
T Consensus 386 ~~~vP~isvi~g~~~Gga~~am~~~~~~~d~~~a~p~a~~~-------v~~pe~a~~i~~~~~l~~~~~~~~~~~~~~~~ 458 (512)
T TIGR01117 386 EATVPKVTIITRKAYGGAYLAMCSKHLGADQVYAWPTAEIA-------VMGPAGAANIIFRKDIKEAKDPAATRKQKIAE 458 (512)
T ss_pred hCCCCEEEEEcCCCchHHHHHhccccCCCCEEEEcCCCeEe-------ecCHHHHHHHHhhhhcccccCHHHHHHHHHHH
Confidence 89999999999999888653332 38888877776554 4433333332222 111 01 1 11 1 1
Q ss_pred hcCCCCCHHHHHHcCccceecCCCChhH
Q 021410 150 LTGAKLNGAEMMACGLATHYSVSEKLPL 177 (312)
Q Consensus 150 ltg~~i~a~eA~~~Glv~~vv~~~~l~~ 177 (312)
+.-+..++..+.+.|+||.|+++.+...
T Consensus 459 ~~~~~~~~~~~a~~g~vD~VI~P~~tR~ 486 (512)
T TIGR01117 459 YREEFANPYKAAARGYVDDVIEPKQTRP 486 (512)
T ss_pred HHHhhcCHHHHHhcCCCCeeEChHHHHH
Confidence 1223457889999999999999988754
No 140
>COG0825 AccA Acetyl-CoA carboxylase alpha subunit [Lipid metabolism]
Probab=96.59 E-value=0.0019 Score=56.76 Aligned_cols=93 Identities=12% Similarity=0.096 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHh
Q 021410 71 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLAL 150 (312)
Q Consensus 71 ~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~l 150 (312)
...+.+-+..+.++++|+||.|=|---+||.--...+|.+++-++++|+. +.|.++++.++ += +..+.+. -
T Consensus 174 ~eAIA~nL~em~~LkvPiI~iVIGEGgSGGALAi~vad~V~mle~s~ySV------isPEG~AsILW-kD-~~ka~eA-A 244 (317)
T COG0825 174 SEAIARNLREMARLKVPIISIVIGEGGSGGALAIGVADRVLMLENSTYSV------ISPEGCASILW-KD-ASKAKEA-A 244 (317)
T ss_pred HHHHHHHHHHHhCCCCCEEEEEecCCCchhhHHhhHHHHHHHHHhceeee------cChhhhhhhhh-cC-hhhhHHH-H
Confidence 34455566778899999999998887666655555689999999999875 55666555433 21 2223332 3
Q ss_pred cCCCCCHHHHHHcCccceecCC
Q 021410 151 TGAKLNGAEMMACGLATHYSVS 172 (312)
Q Consensus 151 tg~~i~a~eA~~~Glv~~vv~~ 172 (312)
....|+|.+.+++|+||.|+|.
T Consensus 245 e~mkita~dLk~lgiID~II~E 266 (317)
T COG0825 245 EAMKITAHDLKELGIIDGIIPE 266 (317)
T ss_pred HHcCCCHHHHHhCCCcceeccC
Confidence 4568899999999999999974
No 141
>PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ]. The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognised types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxo acid as the acceptor molecule of carbon dioxide. All of the members in this family utilise acyl-CoA as the acceptor molecule.; GO: 0016874 ligase activity; PDB: 2F9Y_B 1XO6_B 1XNV_B 3MFM_C 3IBB_A 1XNW_F 3IAV_B 1XNY_A 3IB9_A 3U9S_F ....
Probab=96.59 E-value=0.015 Score=56.40 Aligned_cols=129 Identities=16% Similarity=0.209 Sum_probs=86.1
Q ss_pred CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccC--CchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCC
Q 021410 9 ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG--DIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLK 86 (312)
Q Consensus 9 ~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~--Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~k 86 (312)
+..+++......+.++++.+.++. +-+|.|.- |.|+ ++.+-. .....+.. +..-...+.. .+
T Consensus 69 ~gGs~g~~~~~Ki~ra~~~A~~~~-~P~v~l~d-----sgGa~~r~~eg~--------~~l~~~g~-i~~~~~~~~~-~i 132 (493)
T PF01039_consen 69 LGGSVGEVHGEKIARAIELALENG-LPLVYLVD-----SGGAFLRMQEGV--------ESLMGMGR-IFRAIARLSG-GI 132 (493)
T ss_dssp GGGTBSHHHHHHHHHHHHHHHHHT-EEEEEEEE-----ESSBCGGGGGHH--------HHHHHHHH-HHHHHHHHHT-TS
T ss_pred ecCCCCcccceeeehHHHHHHHcC-CCcEEecc-----ccccccccchhh--------hhhhhhHH-HHHHHHHHhc-CC
Confidence 456788888999999999888764 55666655 4555 443322 12222222 2223344555 99
Q ss_pred cEEEEEccceecccceeecCCCeEEEeCc-eeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHHH-----
Q 021410 87 PHVAILNGVTMGGGAGVSIPGTFRVACGK-TVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEM----- 160 (312)
Q Consensus 87 p~Iaav~G~a~GgG~~lal~~D~~ia~~~-a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~eA----- 160 (312)
|+|+++.|+|.|||..++..||++|+.++ +.+++. |+...+ ..+|+.++.++.
T Consensus 133 P~I~vv~G~~~Gg~A~~~~~~d~~i~~~~~a~i~l~--------------------GP~vv~-~~~Ge~~~~~~lgG~~~ 191 (493)
T PF01039_consen 133 PQISVVTGPCTGGGAYLAALSDFVIMVKGTARIFLA--------------------GPRVVE-SATGEEVDSEELGGADV 191 (493)
T ss_dssp -EEEEEESEEEGGGGHHHHHSSEEEEETTTCEEESS--------------------THHHHH-HHHSSCTSHHHHHBHHH
T ss_pred CeEEEEccccccchhhcccccCccccCccceEEEec--------------------cccccc-cccCccccchhhhhhhh
Confidence 99999999999999999999999999997 665542 222122 245677777653
Q ss_pred --HHcCccceecCCCC
Q 021410 161 --MACGLATHYSVSEK 174 (312)
Q Consensus 161 --~~~Glv~~vv~~~~ 174 (312)
...|.+|.++++++
T Consensus 192 h~~~sG~~d~v~~de~ 207 (493)
T PF01039_consen 192 HAAKSGVVDYVVDDEE 207 (493)
T ss_dssp HHHTSSSSSEEESSHH
T ss_pred hcccCCCceEEEechH
Confidence 47899999998654
No 142
>TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit. This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane.
Probab=96.45 E-value=0.021 Score=55.58 Aligned_cols=129 Identities=16% Similarity=0.195 Sum_probs=77.4
Q ss_pred CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcE
Q 021410 9 ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPH 88 (312)
Q Consensus 9 ~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~ 88 (312)
+.-+++......+.++++.+.++. +-+|.|.-. .|+.+.+-. .....+.+.+... ....-.+|.
T Consensus 94 ~gGS~g~~~~~K~~r~~e~A~~~~-lPlV~l~dS-----gGarm~eg~--------~~l~~~~~~~~~~--~~~s~~iP~ 157 (512)
T TIGR01117 94 MGGSLGEMHAAKIVKIMDLAMKMG-APVVGLNDS-----GGARIQEAV--------DALKGYGDIFYRN--TIASGVVPQ 157 (512)
T ss_pred cccCCCHHHHHHHHHHHHHHHHcC-CCEEEEecC-----CCCCccccc--------hhhhhHHHHHHHH--HHHcCCCcE
Confidence 456788888889999998887765 556666553 333332210 0111111111111 112345999
Q ss_pred EEEEccceecccceeecCCCeEEEeCce-eEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHH-----HH-
Q 021410 89 VAILNGVTMGGGAGVSIPGTFRVACGKT-VFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAE-----MM- 161 (312)
Q Consensus 89 Iaav~G~a~GgG~~lal~~D~~ia~~~a-~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~e-----A~- 161 (312)
|+++.|+|.||+......||++|+++++ .+++ . |+...+. .+|+.++++| .+
T Consensus 158 Isvv~G~~~GG~a~~~al~D~vim~~~~a~i~~----------a----------GP~vv~~-~~Ge~v~~e~lGGa~~h~ 216 (512)
T TIGR01117 158 ISAIMGPCAGGAVYSPALTDFIYMVDNTSQMFI----------T----------GPQVIKT-VTGEEVTAEQLGGAMAHN 216 (512)
T ss_pred EEEEecCCCcHHHHHHHhcCceEEeccceEEEe----------c----------ChHHHHh-hcCcccchhhcchHHHhc
Confidence 9999999999998887899999999953 3433 1 1111111 3444444444 33
Q ss_pred -HcCccceecCCCC
Q 021410 162 -ACGLATHYSVSEK 174 (312)
Q Consensus 162 -~~Glv~~vv~~~~ 174 (312)
.-|.+|.+++++.
T Consensus 217 ~~sGv~d~~~~de~ 230 (512)
T TIGR01117 217 SVSGVAHFIAEDDD 230 (512)
T ss_pred cccceeEEecCChH
Confidence 5899999987654
No 143
>PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain
Probab=96.38 E-value=0.044 Score=53.90 Aligned_cols=133 Identities=16% Similarity=0.119 Sum_probs=81.4
Q ss_pred CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcE
Q 021410 9 ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPH 88 (312)
Q Consensus 9 ~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~ 88 (312)
+..+++......+.++++.+.+.. +-+|.|.-.|+.+-.+ ....+ .....+.+ +......+....+|.
T Consensus 141 ~GGs~g~~~~~Ki~r~~elA~~~~-lPlV~l~DSgGarl~~-q~e~~---------~~~~~~g~-if~~~~~ls~~~VP~ 208 (569)
T PLN02820 141 KGGTYYPITVKKHLRAQEIAAQCR-LPCIYLVDSGGANLPR-QAEVF---------PDRDHFGR-IFYNQARMSSAGIPQ 208 (569)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHcC-CCEEEEEeCCCcCCcc-ccccc---------chHhHHHH-HHHHHHHHhCCCCCE
Confidence 567889999999999999987654 5677776644333211 00000 00011111 112223345567999
Q ss_pred EEEEccceecccceeecCCCeEEEeCc-eeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHHH-----H-
Q 021410 89 VAILNGVTMGGGAGVSIPGTFRVACGK-TVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEM-----M- 161 (312)
Q Consensus 89 Iaav~G~a~GgG~~lal~~D~~ia~~~-a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~eA-----~- 161 (312)
|++|-|.|.|||......||++|++++ +.+.+ . |+...+. .+|+.+++++. +
T Consensus 209 Isvv~G~~~gGgAy~~a~~D~vim~~~~a~i~~----------a----------GP~vV~~-~~Ge~v~~eeLGGa~~h~ 267 (569)
T PLN02820 209 IALVLGSCTAGGAYVPAMADESVIVKGNGTIFL----------A----------GPPLVKA-ATGEEVSAEDLGGADVHC 267 (569)
T ss_pred EEEEeCCCChHHHHHHHhCCceEEecCCcEEEe----------c----------CHHHHHh-hcCcccCHHHhCCHHHhc
Confidence 999999999999999999999999884 44433 1 2221111 34555555544 3
Q ss_pred -HcCccceecCCCC
Q 021410 162 -ACGLATHYSVSEK 174 (312)
Q Consensus 162 -~~Glv~~vv~~~~ 174 (312)
..|.+|.+++++.
T Consensus 268 ~~sGv~d~~~~de~ 281 (569)
T PLN02820 268 KVSGVSDHFAQDEL 281 (569)
T ss_pred ccccccccccCchH
Confidence 3788888887654
No 144
>COG0777 AccD Acetyl-CoA carboxylase beta subunit [Lipid metabolism]
Probab=95.93 E-value=0.054 Score=47.49 Aligned_cols=135 Identities=13% Similarity=0.144 Sum_probs=85.8
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEE
Q 021410 12 ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI 91 (312)
Q Consensus 12 al~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa 91 (312)
+|..-.=..+.++++.+-.+. +.+|+++.+|+ +-..+- .-.+.++. .....+..+.....|.|+.
T Consensus 137 SmGsVvGeki~ra~E~A~e~k-~P~v~f~aSGG-----ARMQEg--------~lSLMQMa-ktsaAl~~l~ea~lpyIsV 201 (294)
T COG0777 137 SMGSVVGEKITRAIERAIEDK-LPLVLFSASGG-----ARMQEG--------ILSLMQMA-KTSAALKRLSEAGLPYISV 201 (294)
T ss_pred chhHHHHHHHHHHHHHHHHhC-CCEEEEecCcc-----hhHhHH--------HHHHHHHH-HHHHHHHHHHhcCCceEEE
Confidence 445555567788888777653 78898888653 333221 11112222 2334556677889999999
Q ss_pred Eccceecc-cceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHHHHHcCccceec
Q 021410 92 LNGVTMGG-GAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYS 170 (312)
Q Consensus 92 v~G~a~Gg-G~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~eA~~~Glv~~vv 170 (312)
+..+..|| -..+++..|+.||.++|.+|+.--++ +-....+-+-.| .=+++-.++.|+||.||
T Consensus 202 Lt~PTtGGVsASfA~lGDi~iAEP~AlIGFAGpRV---------------IEQTire~LPeg-fQ~aEfLlehG~iD~iv 265 (294)
T COG0777 202 LTDPTTGGVSASFAMLGDIIIAEPGALIGFAGPRV---------------IEQTIREKLPEG-FQTAEFLLEHGMIDMIV 265 (294)
T ss_pred ecCCCccchhHhHHhccCeeecCcccccccCcchh---------------hhhhhcccCCcc-hhhHHHHHHcCCceeee
Confidence 99999988 57799999999999888777643331 111111111111 11456678999999999
Q ss_pred CCCChhH
Q 021410 171 VSEKLPL 177 (312)
Q Consensus 171 ~~~~l~~ 177 (312)
+..++..
T Consensus 266 ~R~elr~ 272 (294)
T COG0777 266 HRDELRT 272 (294)
T ss_pred cHHHHHH
Confidence 9877654
No 145
>KOG0840 consensus ATP-dependent Clp protease, proteolytic subunit [Posttranslational modification, protein turnover, chaperones]
Probab=95.33 E-value=0.072 Score=46.21 Aligned_cols=132 Identities=11% Similarity=0.042 Sum_probs=71.9
Q ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 021410 13 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL 92 (312)
Q Consensus 13 l~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav 92 (312)
+|.++-+.+...|-.++.+++-|=|.+.=+ |.|+++.. ...++..|..++-||=..+
T Consensus 101 Idd~va~~viaqlL~Ld~ed~~K~I~lyIN----SPGG~vta-------------------glAIYDtMq~ik~~V~Tic 157 (275)
T KOG0840|consen 101 IDDDVANLVIAQLLYLDSEDPKKPIYLYIN----SPGGSVTA-------------------GLAIYDTMQYIKPDVSTIC 157 (275)
T ss_pred CcHHHHHHHHHHHHHhhccCCCCCeEEEEe----CCCCccch-------------------hhhHHHHHHhhCCCceeee
Confidence 677777888777777777666666655443 44554421 1123334445555555555
Q ss_pred ccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHH------------HHhcCC-------
Q 021410 93 NGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEF------------LALTGA------- 153 (312)
Q Consensus 93 ~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~------------l~ltg~------- 153 (312)
=|.|.+-|.-|..+ .+++-+|++|..++=+--+.|++.=-..=+-..+++ .--||+
T Consensus 158 ~G~Aas~aalLLaa-----G~KG~R~alPnsriMIhQP~gga~Gqa~Di~i~akE~~~~k~~l~~i~a~~Tgq~~e~i~~ 232 (275)
T KOG0840|consen 158 VGLAASMAALLLAA-----GAKGKRYALPNSRIMIHQPSGGAGGQATDIVIQAKELMRIKEYLNEIYAKHTGQPLEVIEK 232 (275)
T ss_pred hhhHHhHHHHHHhc-----CCCcceeecCCceeEEeccCCCcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHh
Confidence 56666655444332 244566777777665532222211000000000222 122454
Q ss_pred ------CCCHHHHHHcCccceecCC
Q 021410 154 ------KLNGAEMMACGLATHYSVS 172 (312)
Q Consensus 154 ------~i~a~eA~~~Glv~~vv~~ 172 (312)
.++|+||.++||+|+|++.
T Consensus 233 d~dRd~fmsa~EA~eyGliD~v~~~ 257 (275)
T KOG0840|consen 233 DMDRDRFMSAEEAKEYGLIDKVIDH 257 (275)
T ss_pred hhcccccCCHHHHHHhcchhhhhcC
Confidence 4899999999999999863
No 146
>PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ]. The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognised types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxo acid as the acceptor molecule of carbon dioxide. All of the members in this family utilise acyl-CoA as the acceptor molecule.; GO: 0016874 ligase activity; PDB: 2F9Y_B 1XO6_B 1XNV_B 3MFM_C 3IBB_A 1XNW_F 3IAV_B 1XNY_A 3IB9_A 3U9S_F ....
Probab=95.24 E-value=0.088 Score=51.18 Aligned_cols=154 Identities=19% Similarity=0.213 Sum_probs=89.8
Q ss_pred EEecCCCCCC-CCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410 2 AILNRPSALN-ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 80 (312)
Q Consensus 2 itln~p~~~N-al~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (312)
|.=|+|.... +++++-.....+.++.++. .++-+|.|.-. ..|..|-. .+.....+..-+++..
T Consensus 298 iian~~~~~~G~~~~~~a~K~arfi~lcd~-~~iPlv~l~dt-pGf~~g~~-------------~E~~g~~~~ga~~~~a 362 (493)
T PF01039_consen 298 IIANNPRQRAGALDPDGARKAARFIRLCDA-FNIPLVTLVDT-PGFMPGPE-------------AERAGIIRAGARLLYA 362 (493)
T ss_dssp EEEE-TTCGGGEB-HHHHHHHHHHHHHHHH-TT--EEEEEEE-CEB--SHH-------------HHHTTHHHHHHHHHHH
T ss_pred EEEeccccccccCChHHHHHHHHHHHHHHh-hCCceEEEeec-ccccccch-------------hhhcchHHHHHHHHHH
Confidence 3446665322 6999999999999999887 45777777653 23333321 1222345566788889
Q ss_pred HhhCCCcEEEEEccceecccceeecCC----CeEEEeCceeEecCCCcccccCCCchHHHhhhcC-------h--HHH--
Q 021410 81 LGTHLKPHVAILNGVTMGGGAGVSIPG----TFRVACGKTVFATPETLIGFHPDAGASFYLSHLP-------G--HLG-- 145 (312)
Q Consensus 81 l~~~~kp~Iaav~G~a~GgG~~lal~~----D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~-------g--~~a-- 145 (312)
+..+.+|+|..|-|.+.|||....... |+++|.++++ +|++++-++...+.+.- | ..+
T Consensus 363 ~~~~~vP~itvi~~~~~Gga~~am~~~~~~~~~~~Awp~a~-------~~vm~~e~a~~i~~~~~~~~~~~~~~~~~~~~ 435 (493)
T PF01039_consen 363 LAEATVPKITVIVRKAYGGAYYAMCGRGYGPDFVFAWPTAE-------IGVMGPEGAASILYRDELEAAEAEGADPEAQR 435 (493)
T ss_dssp HHHH-S-EEEEEEEEEEHHHHHHTTGGGGTTSEEEEETT-E-------EESS-HHHHHHHHTHHHHHHSCHCCHSHHHHH
T ss_pred HHcCCCCEEEEEeCCccCcchhhhcccccchhhhhhhhcce-------eeecChhhhheeeehhhhhhhhcccchhHHHH
Confidence 999999999999999999876444333 6665555554 45554444443333211 0 000
Q ss_pred -HHHH-hcCCCCCHHHHHHcCccceecCCCChhH
Q 021410 146 -EFLA-LTGAKLNGAEMMACGLATHYSVSEKLPL 177 (312)
Q Consensus 146 -~~l~-ltg~~i~a~eA~~~Glv~~vv~~~~l~~ 177 (312)
..+- +.-...++..+...|++|.++++.+...
T Consensus 436 ~~~~~~~~~~~~~~~~~a~~~~~D~ii~p~~tR~ 469 (493)
T PF01039_consen 436 AEKIAEYEDELSSPYRAASRGYVDDIIDPAETRK 469 (493)
T ss_dssp HHHHHHHHHHHSSHHHHHHTTSSSEESSGGGHHH
T ss_pred HHHHHHHHHhcCCHHHHHhcCCCCCccCHHHHHH
Confidence 0110 1112247889999999999999988754
No 147
>PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain
Probab=94.97 E-value=0.35 Score=47.66 Aligned_cols=144 Identities=14% Similarity=0.085 Sum_probs=91.5
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEE
Q 021410 11 NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA 90 (312)
Q Consensus 11 Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Ia 90 (312)
-+++.+-.....+.++.+++ -++-+|.|.-.++ |..|.+-. .....+...+++..+....+|.|+
T Consensus 380 g~l~~~~a~Kaarfi~lc~~-~~iPlv~l~D~pG-f~~G~~~E-------------~~G~~~~~a~l~~A~a~~~VP~is 444 (569)
T PLN02820 380 GILFTESALKGAHFIELCAQ-RGIPLLFLQNITG-FMVGSRSE-------------ASGIAKAGAKMVMAVACAKVPKIT 444 (569)
T ss_pred CccCHHHHHHHHHHHHHHHh-cCCCEEEEEECCC-CCCCHHHH-------------HhhHHHHHHHHHHHHHhCCCCEEE
Confidence 35777888888888888775 4566666654322 44443322 123456667888889999999999
Q ss_pred EEccceecccceeec----CCCeEEEeCceeEecCCCcccccCCCchHHHhhhc-C------------hHH-H-HH-H-H
Q 021410 91 ILNGVTMGGGAGVSI----PGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL-P------------GHL-G-EF-L-A 149 (312)
Q Consensus 91 av~G~a~GgG~~lal----~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~-~------------g~~-a-~~-l-~ 149 (312)
.|-|.+.|+|..-.. ..|++++. |...+|..++-++...+.+. + -.. + .+ + -
T Consensus 445 vi~g~a~G~g~~aM~g~~~~~d~~~aw-------p~A~i~vmg~e~aa~il~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (569)
T PLN02820 445 IIVGGSFGAGNYGMCGRAYSPNFLFMW-------PNARIGVMGGAQAAGVLAQIERENKKRQGIQWSKEEEEAFKAKTVE 517 (569)
T ss_pred EEECCcchHHHHHhcCcCCCCCEEEEC-------CCCeEEecCHHHHHHHHHHHHhhhhhhccccCCccHHHHHHHHHHH
Confidence 999999998654333 45665555 55566776666555545431 1 000 0 00 0 1
Q ss_pred hcCCCCCHHHHHHcCccceecCCCChh
Q 021410 150 LTGAKLNGAEMMACGLATHYSVSEKLP 176 (312)
Q Consensus 150 ltg~~i~a~eA~~~Glv~~vv~~~~l~ 176 (312)
..-+..++..|-+.|+||.|+++.+..
T Consensus 518 ~~~~~~~p~~aa~~~~vD~VIdP~dTR 544 (569)
T PLN02820 518 AYEREANPYYSTARLWDDGVIDPADTR 544 (569)
T ss_pred HHHHhCCHHHHHHcCCcCcccCHHHHH
Confidence 122245777888999999999987754
No 148
>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]
Probab=94.45 E-value=0.11 Score=50.18 Aligned_cols=94 Identities=13% Similarity=0.058 Sum_probs=59.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCC
Q 021410 7 PSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLK 86 (312)
Q Consensus 7 p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~k 86 (312)
+.+.-++.+-....+.++.+.+..+..-.+.+..| .|+.+.+=. .....+-+ ++.-...+... +
T Consensus 101 TV~gGt~~~~~~~Ki~r~~~~A~~~g~P~i~l~ds------gGari~~~v--------~~l~g~g~-iF~~~a~~Sg~-I 164 (526)
T COG4799 101 TVKGGTLGEMTAKKILRAQELAIENGLPVIGLNDS------GGARIQEGV--------PSLAGYGR-IFYRNARASGV-I 164 (526)
T ss_pred ceecccccccccchHHHHHHHHHHcCCCEEEEEcc------cccccccCc--------cccccchH-HHHHHHHhccC-C
Confidence 33556666666777777777777655433444433 455554211 11111211 11222234444 9
Q ss_pred cEEEEEccceecccceeecCCCeEEEeCce
Q 021410 87 PHVAILNGVTMGGGAGVSIPGTFRVACGKT 116 (312)
Q Consensus 87 p~Iaav~G~a~GgG~~lal~~D~~ia~~~a 116 (312)
|.|++|-|.|.|||..+...||++|+.++.
T Consensus 165 PqIsvv~G~c~gGgaY~pal~D~~imv~~~ 194 (526)
T COG4799 165 PQISVVMGPCAGGGAYSPALTDFVIMVRDQ 194 (526)
T ss_pred CEEEEEEecCcccccccccccceEEEEcCC
Confidence 999999999999999999999999999985
No 149
>PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=91.30 E-value=0.37 Score=45.46 Aligned_cols=59 Identities=14% Similarity=0.105 Sum_probs=47.6
Q ss_pred HHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhee---eccC
Q 021410 248 STLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQ---ILNK 310 (312)
Q Consensus 248 ~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~---l~~r 310 (312)
+.+++++..+|.++..+|+.++... ....+.+..|...+..++. ++|+.|++.+| +++|
T Consensus 228 ~~~~~i~~~~p~av~~~k~~~~~~~-~~~~~~l~~~~~~i~~~f~---~~d~~ei~~al~~~~~kr 289 (401)
T PLN02157 228 EQLKKLLTDDPSVVESCLEKCAEVA-HPEKTGVIRRIDLLEKCFS---HDTVEEIIDSLEIEAGRR 289 (401)
T ss_pred HHHHHHHcCCHHHHHHHHHHHhccc-CCcchhHHHHHHHHHHHhc---CCCHHHHHHHHHhhhccc
Confidence 3477888889999999999998652 4456777778888888887 99999999999 6554
No 150
>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]
Probab=87.47 E-value=8.9 Score=37.34 Aligned_cols=155 Identities=15% Similarity=0.134 Sum_probs=97.7
Q ss_pred ecCCC-CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHh
Q 021410 4 LNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLG 82 (312)
Q Consensus 4 ln~p~-~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 82 (312)
=|+|. ..-+|+.+--..-.+.++.... .++-.|.|.-. ..|..|-|-.. ....+...+++.++.
T Consensus 330 ANqp~~~~G~l~~~sa~KaArFI~~cd~-~~iPlv~L~d~-pGFm~G~~~E~-------------~giik~Gakl~~A~a 394 (526)
T COG4799 330 ANQPRHLGGVLDIDSADKAARFIRLCDA-FNIPLVFLVDT-PGFMPGTDQEY-------------GGIIKHGAKLLYAVA 394 (526)
T ss_pred ecCccccccccchHHHHHHHHHHHhhhc-cCCCeEEEeCC-CCCCCChhHHh-------------ChHHHhhhHHHhhHh
Confidence 45565 3456888888888888855443 34666655432 55887766432 234555668889999
Q ss_pred hCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhh-cChHH---HH---------HHH
Q 021410 83 THLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH-LPGHL---GE---------FLA 149 (312)
Q Consensus 83 ~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r-~~g~~---a~---------~l~ 149 (312)
+..+|.|..|-|.+.|||......-.+- .+-.|..|..++|+.-+-|+.-.+.+ .+... .. .--
T Consensus 395 eatVPkitvI~rkayGga~~~M~~~~~~---~~~~~AwP~a~iaVMG~egAv~i~~~k~l~~~~~~~~~~~~~~~~~~~e 471 (526)
T COG4799 395 EATVPKITVITRKAYGGAYYVMGGKALG---PDFNYAWPTAEIAVMGPEGAVSILYRKELAAAERPEEREALLRKQLIAE 471 (526)
T ss_pred hccCCeEEEEecccccceeeeecCccCC---CceeEecCcceeeecCHHHHHHHHHHHHhhcccCchhHHHHHHHHHHHH
Confidence 9999999999999999987655443332 55666677777777654454444433 22110 00 001
Q ss_pred hcCCCCCHHHHHHcCccceecCCCChh
Q 021410 150 LTGAKLNGAEMMACGLATHYSVSEKLP 176 (312)
Q Consensus 150 ltg~~i~a~eA~~~Glv~~vv~~~~l~ 176 (312)
+.-+..++--|.+.|++|.|+++.+..
T Consensus 472 Y~~~~~~p~~aa~r~~iD~vI~p~~tR 498 (526)
T COG4799 472 YEEQFSNPYYAAERGYIDAVIDPADTR 498 (526)
T ss_pred HHHhccchHHHHHhCCCCcccCHHHHH
Confidence 122234566777899999999887643
No 151
>COG0074 SucD Succinyl-CoA synthetase, alpha subunit [Energy production and conversion]
Probab=81.28 E-value=5.3 Score=35.59 Aligned_cols=53 Identities=28% Similarity=0.449 Sum_probs=35.6
Q ss_pred HHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEcccee
Q 021410 21 LNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTM 97 (312)
Q Consensus 21 L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~ 97 (312)
+.++|+.+++||+.++||+-|. -|.+-.+ ...+| +.. ....||||+.+-|.+.
T Consensus 188 fid~L~~fe~Dp~T~~ivmiGE-----iGG~aEe-----------~AA~~-------i~~-~~~~KPVVa~iaG~ta 240 (293)
T COG0074 188 FIDALEMFEADPETEAIVMIGE-----IGGPAEE-----------EAAEY-------IKA-NATRKPVVAYIAGRTA 240 (293)
T ss_pred HHHHHHHHhcCccccEEEEEec-----CCCcHHH-----------HHHHH-------HHH-hccCCCEEEEEeccCC
Confidence 4578889999999999999997 2333221 12222 222 2345999999999865
No 152
>KOG0540 consensus 3-Methylcrotonyl-CoA carboxylase, non-biotin containing subunit/Acetyl-CoA carboxylase carboxyl transferase, subunit beta [Amino acid transport and metabolism; Lipid transport and metabolism]
Probab=78.21 E-value=17 Score=34.60 Aligned_cols=148 Identities=15% Similarity=0.124 Sum_probs=91.3
Q ss_pred EecCCC-CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHH
Q 021410 3 ILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLL 81 (312)
Q Consensus 3 tln~p~-~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 81 (312)
.-|+|+ ....|..+.-..-.+.++...+ ..+-.|.|...++ |-.|.+.+.. ...+....+....
T Consensus 354 vgnn~kf~~G~L~s~sa~KgarfIe~c~q-~~IPLi~l~ni~G-fm~g~~~e~~-------------gIaK~gAklv~a~ 418 (536)
T KOG0540|consen 354 VGNNPKFAGGVLFSESAVKGARFIELCDQ-RNIPLIFLQNITG-FMVGRAAEAG-------------GIAKHGAKLVYAV 418 (536)
T ss_pred eccCchhcccccchhhhhhhHHHHHHHHh-cCCcEEEEEccCC-ccccchhhhh-------------chhhhhhhhhhhh
Confidence 345555 3345666665666666655543 4577777777666 8888887632 1223344677778
Q ss_pred hhCCCcEEEEEccceecccce---eecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhc-----C--hHHHHHHHhc
Q 021410 82 GTHLKPHVAILNGVTMGGGAG---VSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL-----P--GHLGEFLALT 151 (312)
Q Consensus 82 ~~~~kp~Iaav~G~a~GgG~~---lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~-----~--g~~a~~l~lt 151 (312)
....+|-|..+.|.+.||-.. -.+.-|+.++.+.+++++--. -++.-.+.+. + +....+.+
T Consensus 419 a~akvpkITiit~~syGG~y~m~sr~~~gd~~yawP~A~IavmG~-------~~a~~Vi~q~~~e~a~~~~~~~~E~f-- 489 (536)
T KOG0540|consen 419 ACAKVPKITIITGGSYGGNYAMCSRGYSGDINYAWPNARIAVMGG-------KQAANVIFQITLEKAVALKAPYIEKF-- 489 (536)
T ss_pred hhccCceEEEEecCccCCcccccccccCCceeEEcccceeeeccc-------cchhhhhhhhhhhhhhhhcchHHHHh--
Confidence 888999999999999997544 556677777776666654322 2222223332 1 11223332
Q ss_pred CCCCCHHHHHHcCccceecCCCChhH
Q 021410 152 GAKLNGAEMMACGLATHYSVSEKLPL 177 (312)
Q Consensus 152 g~~i~a~eA~~~Glv~~vv~~~~l~~ 177 (312)
|.++. |...|++|.++++.+...
T Consensus 490 ~npy~---a~~Rg~~D~II~p~~tR~ 512 (536)
T KOG0540|consen 490 GNPYY---AAARGWDDGIIDPSDTRK 512 (536)
T ss_pred cCccH---HHHhhccccccChhHhhH
Confidence 55553 567899999999877543
No 153
>PTZ00187 succinyl-CoA synthetase alpha subunit; Provisional
Probab=72.66 E-value=12 Score=34.18 Aligned_cols=54 Identities=26% Similarity=0.436 Sum_probs=34.5
Q ss_pred HHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEcccee
Q 021410 20 KLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTM 97 (312)
Q Consensus 20 ~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~ 97 (312)
.+.+.|+.+.+||+.++|++.+.+ |.+- .+...+|.+. ....||||+.+-|..-
T Consensus 211 ~~~D~L~~~~~Dp~T~~Ivl~~E~-----gG~~-----------e~~aa~fi~~--------~~~~KPVVa~~aGrsa 264 (317)
T PTZ00187 211 NFIDCLKLFLNDPETEGIILIGEI-----GGTA-----------EEEAAEWIKN--------NPIKKPVVSFIAGITA 264 (317)
T ss_pred CHHHHHHHHhhCCCccEEEEEEec-----CCch-----------hHHHHHHHHh--------hcCCCcEEEEEecCCC
Confidence 355778888889999999988862 1111 1122233321 2368999999998753
No 154
>PF00549 Ligase_CoA: CoA-ligase; InterPro: IPR005811 This entry represents a domain found in both the alpha and beta chains of succinyl-CoA synthase (6.2.1.4 from EC (GDP-forming) and 6.2.1.5 from EC (ADP-forming)) [, ]. This domain can also be found in ATP citrate synthase (2.3.3.8 from EC) and malate-CoA ligase (6.2.1.9 from EC). Some members of the domain utilise ATP others use GTP.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3DMY_B 3MWE_B 3PFF_A 3MWD_B 2YV1_A 1EUC_A 2FP4_A 1EUD_A 2FPI_A 2FPG_A ....
Probab=68.34 E-value=12 Score=30.33 Aligned_cols=62 Identities=15% Similarity=0.134 Sum_probs=35.5
Q ss_pred HHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEccceec
Q 021410 20 KLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMG 98 (312)
Q Consensus 20 ~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~G 98 (312)
...+++....+||++++|+|-+.+++=+. .+....+...+..... ...++|+|+.|-|..--
T Consensus 60 ~~~~~l~~~~~Dp~v~vIlvd~~~G~g~~---------------~~~A~~l~~a~~~~~~--~~~~~pvVa~v~GT~~d 121 (153)
T PF00549_consen 60 TRNEALEIEAADPEVKVILVDIVGGIGSC---------------EDPAAGLIPAIKEAKA--EGRKKPVVARVCGTNAD 121 (153)
T ss_dssp HHHHHHHHHHTSTTESEEEEEEESSSSSH---------------HHHHHHHHHHHSHCTH--TTT-SEEEEEEESTTCH
T ss_pred HHHHHHHHHhcCCCccEEEEEeccccCch---------------HHHHHHHHHHHHhccc--cCCCCcEEEEeeeecCC
Confidence 44566888889999999999886432111 1111122221111110 34689999999886543
No 155
>TIGR00237 xseA exodeoxyribonuclease VII, large subunit. This family consist of exodeoxyribonuclease VII, large subunit XseA which catalyses exonucleolytic cleavage in either the 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. Exonuclease VII consists of one large subunit and four small subunits.
Probab=67.55 E-value=9.9 Score=36.37 Aligned_cols=58 Identities=7% Similarity=0.035 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 021410 15 TNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL 92 (312)
Q Consensus 15 ~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav 92 (312)
.....++..+++.+...+++.+|||.=.|+ -+.++... - -..+.+++..+|+|||++|
T Consensus 169 ~~a~~~i~~al~~~~~~~~~dviii~RGGG------s~eDL~~F------------n--~e~~~rai~~~~~Pvis~i 226 (432)
T TIGR00237 169 EGAVQSIVESIELANTKNECDVLIVGRGGG------SLEDLWSF------------N--DEKVARAIFLSKIPIISAV 226 (432)
T ss_pred ccHHHHHHHHHHHhhcCCCCCEEEEecCCC------CHHHhhhc------------C--cHHHHHHHHcCCCCEEEec
Confidence 344567777887777655566666643322 23333211 1 1256778999999999976
No 156
>PF13607 Succ_CoA_lig: Succinyl-CoA ligase like flavodoxin domain; PDB: 2CSU_A.
Probab=66.96 E-value=18 Score=28.72 Aligned_cols=52 Identities=23% Similarity=0.307 Sum_probs=26.7
Q ss_pred HHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEccce
Q 021410 20 KLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVT 96 (312)
Q Consensus 20 ~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a 96 (312)
.+.+.++.+..||++++|++.-.+ ..| . +.+.+........ ||||+..-|..
T Consensus 41 ~~~d~l~~~~~D~~t~~I~ly~E~-----~~d------------~-------~~f~~~~~~a~~~-KPVv~lk~Grt 92 (138)
T PF13607_consen 41 DFADLLEYLAEDPDTRVIVLYLEG-----IGD------------G-------RRFLEAARRAARR-KPVVVLKAGRT 92 (138)
T ss_dssp -HHHHHHHHCT-SS--EEEEEES-------S-------------H-------HHHHHHHHHHCCC-S-EEEEE----
T ss_pred CHHHHHHHHhcCCCCCEEEEEccC-----CCC------------H-------HHHHHHHHHHhcC-CCEEEEeCCCc
Confidence 466778888889999999987753 001 1 1122334445555 99999998873
No 157
>PF02601 Exonuc_VII_L: Exonuclease VII, large subunit; InterPro: IPR020579 Exonuclease VII 3.1.11.6 from EC is composed of two nonidentical subunits; one large subunit and 4 small ones []. Exonuclease VII catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. The large subunit also contains the OB-fold domains (IPR004365 from INTERPRO) that bind to nucleic acids at the N terminus. This entry represents Exonuclease VII, large subunit, C-terminal. ; GO: 0008855 exodeoxyribonuclease VII activity
Probab=66.60 E-value=12 Score=34.19 Aligned_cols=57 Identities=12% Similarity=0.195 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHhhcCC---CceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 021410 16 NMGAKLNKLFKAWENDP---NIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL 92 (312)
Q Consensus 16 ~~~~~L~~~l~~~~~d~---~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav 92 (312)
....++..+++.+...+ .+.+|||.=. |+.+.++... - -..+.+++..+|.|||++|
T Consensus 55 ~A~~~I~~al~~~~~~~~~~~~Dviii~RG------GGs~eDL~~F------------N--~e~varai~~~~~PvisaI 114 (319)
T PF02601_consen 55 GAAASIVSALRKANEMGQADDFDVIIIIRG------GGSIEDLWAF------------N--DEEVARAIAASPIPVISAI 114 (319)
T ss_pred chHHHHHHHHHHHHhccccccccEEEEecC------CCChHHhccc------------C--hHHHHHHHHhCCCCEEEec
Confidence 44567788888887654 4566665432 2333333211 1 1357788999999999976
No 158
>smart00250 PLEC Plectin repeat.
Probab=64.32 E-value=5.6 Score=23.83 Aligned_cols=18 Identities=39% Similarity=0.470 Sum_probs=16.9
Q ss_pred cCCCCCHHHHHHcCccce
Q 021410 151 TGAKLNGAEMMACGLATH 168 (312)
Q Consensus 151 tg~~i~a~eA~~~Glv~~ 168 (312)
||++++-.||.+.||+|.
T Consensus 18 t~~~lsv~eA~~~glid~ 35 (38)
T smart00250 18 TGQKLSVEEALRRGLIDP 35 (38)
T ss_pred CCCCcCHHHHHHcCCCCc
Confidence 899999999999999975
No 159
>PLN02522 ATP citrate (pro-S)-lyase
Probab=59.24 E-value=32 Score=34.39 Aligned_cols=52 Identities=23% Similarity=0.270 Sum_probs=32.7
Q ss_pred HHHHHHHhhcCCCceEEEEEeC-CCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEcccee
Q 021410 21 LNKLFKAWENDPNIGFVSMKGS-GRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTM 97 (312)
Q Consensus 21 L~~~l~~~~~d~~v~~vvl~g~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~ 97 (312)
+.+.|+.+++||++++|++.+. |. .| . .++. +...... ..||||+.+-|.+-
T Consensus 210 ~~D~L~~~~~Dp~Tk~IvlygEiGg-----~~------------e---~~f~----ea~~~a~-~~KPVVa~kaGrsa 262 (608)
T PLN02522 210 LSDHVLRFNNIPQIKMIVVLGELGG-----RD------------E---YSLV----EALKQGK-VSKPVVAWVSGTCA 262 (608)
T ss_pred HHHHHHHHhcCCCCCEEEEEEecCc-----hh------------H---HHHH----HHHHHhc-CCCCEEEEeccCCC
Confidence 4566777888888888888876 31 11 1 1111 1222222 68999999999876
No 160
>COG1570 XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair]
Probab=58.61 E-value=21 Score=33.96 Aligned_cols=17 Identities=6% Similarity=0.094 Sum_probs=14.8
Q ss_pred HHHHHHhhCCCcEEEEE
Q 021410 76 SFIYLLGTHLKPHVAIL 92 (312)
Q Consensus 76 ~~~~~l~~~~kp~Iaav 92 (312)
.+.+++..+++|+|++|
T Consensus 216 ~vaRAi~~s~iPvISAV 232 (440)
T COG1570 216 IVARAIAASRIPVISAV 232 (440)
T ss_pred HHHHHHHhCCCCeEeec
Confidence 56788999999999987
No 161
>PRK07938 enoyl-CoA hydratase; Provisional
Probab=57.82 E-value=38 Score=29.60 Aligned_cols=131 Identities=11% Similarity=0.014 Sum_probs=74.0
Q ss_pred ccceecccceeecCC-CeEEEeCceeEecCCCcccccCC-CchH-----HHhhhcChHH-HHHHHhcCCCCCHHHHHHcC
Q 021410 93 NGVTMGGGAGVSIPG-TFRVACGKTVFATPETLIGFHPD-AGAS-----FYLSHLPGHL-GEFLALTGAKLNGAEMMACG 164 (312)
Q Consensus 93 ~G~a~GgG~~lal~~-D~~ia~~~a~f~~pe~~~G~~p~-~g~~-----~~l~r~~g~~-a~~l~ltg~~i~a~eA~~~G 164 (312)
-|..+...|.+..++ |-+++.+.+++|++.... .+|. .|.. .+..+.+... |.++.+--+.++.++..+.
T Consensus 108 gG~~Lal~cD~ria~~~a~f~~pe~~~G~~g~~~-~l~~~vg~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~- 185 (249)
T PRK07938 108 GGIGLVGNADVIVASDDATFGLPEVDRGALGAAT-HLQRLVPQHLMRALFFTAATITAAELHHFGSVEEVVPRDQLDEA- 185 (249)
T ss_pred hHHHHHHhCCEEEEeCCCEeeCccceecCchhHH-HHHHhcCHHHHHHHHHhCCcCCHHHHHHCCCccEEeCHHHHHHH-
Confidence 344455556655555 567777888888763221 2221 1221 1234455556 8888888888876654432
Q ss_pred ccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCC-cchhhhHHHHHHhhcC-CCCHHHHHHHHHccc
Q 021410 165 LATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRIDIVDKCFG-LDTVEEIIDSLESEA 238 (312)
Q Consensus 165 lv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~ 238 (312)
..+.++.+ +..+|.+++..|+.++...... .............++. .+..+++-++++|+.
T Consensus 186 ----------a~~~a~~l---a~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~~~d~~eg~~af~ekr~ 248 (249)
T PRK07938 186 ----------ALEVARKI---AAKDTRVIRAAKEALNGIDPQDVERSYRWEQGFTFELNLAGVSDEHRDAFVEKRK 248 (249)
T ss_pred ----------HHHHHHHH---HhCCHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhcCccHHHHHHHHHhcCC
Confidence 23345554 4568889999999886543322 2222223345566675 455566666777763
No 162
>PRK05864 enoyl-CoA hydratase; Provisional
Probab=56.92 E-value=41 Score=29.89 Aligned_cols=134 Identities=10% Similarity=0.089 Sum_probs=76.7
Q ss_pred ccceecccceeecCC-CeEEEeCceeEecCCCcccc---cCCC-chH-----HHhhhcChHH-HHHHHhcCCCCCHHHHH
Q 021410 93 NGVTMGGGAGVSIPG-TFRVACGKTVFATPETLIGF---HPDA-GAS-----FYLSHLPGHL-GEFLALTGAKLNGAEMM 161 (312)
Q Consensus 93 ~G~a~GgG~~lal~~-D~~ia~~~a~f~~pe~~~G~---~p~~-g~~-----~~l~r~~g~~-a~~l~ltg~~i~a~eA~ 161 (312)
-|..+...|.+..++ |-+++.+...+|++....|. +|.. |.. .+..+.+... |.++.+-.+.++.++..
T Consensus 123 gG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~l~~~vG~~~A~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~ 202 (276)
T PRK05864 123 GGLCLALAADIRVASSSAYFRAAGINNGLTASELGLSYLLPRAIGSSRAFEIMLTGRDVDAEEAERIGLVSRQVPDEQLL 202 (276)
T ss_pred hHHHHHHhCCEEEeeCCCEecCcccccCCCCCCcchheehHhhhCHHHHHHHHHcCCccCHHHHHHcCCcceeeCHHHHH
Confidence 366667777777665 46788888999988655553 3432 211 1233444555 77777777777766643
Q ss_pred HcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCC-Ccchhhh-HHH--HHHhhc-CCCCHHHHHHHHHc
Q 021410 162 ACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYP-DKNSVIH-RID--IVDKCF-GLDTVEEIIDSLES 236 (312)
Q Consensus 162 ~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~--~~~~~~-~~~~~~~~~~~l~~ 236 (312)
+ +..+.++.+ +..+|.++..+|+.+...... ....... ... .+. ++ +.+..+++.++++|
T Consensus 203 ~-----------~a~~~a~~l---a~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~-~~~~~d~~e~~~af~~k 267 (276)
T PRK05864 203 D-----------TCYAIAARM---AGFSRPGIELTKRTLWSGLDAASLEAHMQAEGLGQLFV-RLLTANFEEAVAARAEK 267 (276)
T ss_pred H-----------HHHHHHHHH---HhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHH-hccChhHHHHHHHHhcc
Confidence 3 233445555 456788888888887643221 1111111 111 122 34 45666777777888
Q ss_pred ccCCC
Q 021410 237 EASLI 241 (312)
Q Consensus 237 ~~~~~ 241 (312)
+.+.+
T Consensus 268 r~p~~ 272 (276)
T PRK05864 268 RPPVF 272 (276)
T ss_pred CCCCC
Confidence 76543
No 163
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=53.77 E-value=4.3 Score=25.39 Aligned_cols=20 Identities=30% Similarity=0.341 Sum_probs=16.6
Q ss_pred hcCCCCCHHHHHHcCcccee
Q 021410 150 LTGAKLNGAEMMACGLATHY 169 (312)
Q Consensus 150 ltg~~i~a~eA~~~Glv~~v 169 (312)
-||++++-++|.+.||+|.-
T Consensus 17 ~tg~~lsv~~A~~~glId~~ 36 (45)
T PF00681_consen 17 ETGERLSVEEAIQRGLIDSD 36 (45)
T ss_dssp TTTEEEEHHHHHHTTSS-HH
T ss_pred CCCeEEcHHHHHHCCCcCHH
Confidence 47899999999999999753
No 164
>PRK05980 enoyl-CoA hydratase; Provisional
Probab=52.73 E-value=51 Score=28.96 Aligned_cols=133 Identities=14% Similarity=0.177 Sum_probs=76.4
Q ss_pred ccceecccceeecCC-CeEEEeCceeEecCCCcccc--cCC-CchH-----HHhhhcChHH-HHHHHhcCCCCCHHHHHH
Q 021410 93 NGVTMGGGAGVSIPG-TFRVACGKTVFATPETLIGF--HPD-AGAS-----FYLSHLPGHL-GEFLALTGAKLNGAEMMA 162 (312)
Q Consensus 93 ~G~a~GgG~~lal~~-D~~ia~~~a~f~~pe~~~G~--~p~-~g~~-----~~l~r~~g~~-a~~l~ltg~~i~a~eA~~ 162 (312)
-|..+...|.+..++ +-++..+...+|++-...|. +|. .|.. .+..+.+... |.++.+--+.++.++..+
T Consensus 114 gG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~ 193 (260)
T PRK05980 114 GGCEITEAVHLAIASERALFAKPEIRLGMPPTFGGTQRLPRLAGRKRALELLLTGDAFSAERALEIGLVNAVVPHEELLP 193 (260)
T ss_pred hhhHHhHhCCEEEecCCCEecCcccccCCCCCchHhhHHHhhcCHHHHHHHHHcCCccCHHHHHHcCCCCcccCHHHHHH
Confidence 344445555655555 46777888888886432222 222 1211 1223444555 888888888887766544
Q ss_pred cCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCC-cchhhhHHHHHHhhcC-CCCHHHHHHHHHcccC
Q 021410 163 CGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRIDIVDKCFG-LDTVEEIIDSLESEAS 239 (312)
Q Consensus 163 ~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~ 239 (312)
+..+.++.+ +..+|.++...|+.++...... ..........+..++. .+..+.+.++++|+.+
T Consensus 194 -----------~a~~~a~~l---a~~~p~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~af~~kr~p 258 (260)
T PRK05980 194 -----------AARALARRI---IRHSPVAVAAILTAVTRGLNLSIAEGLLIESEQFARMAGSADLREGLAAWIERRRP 258 (260)
T ss_pred -----------HHHHHHHHH---HhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcChhHHHHHHHHhccCCC
Confidence 233445554 4467888888888876543322 2223334456677775 5556667667777754
No 165
>PLN00125 Succinyl-CoA ligase [GDP-forming] subunit alpha
Probab=50.84 E-value=40 Score=30.61 Aligned_cols=53 Identities=21% Similarity=0.301 Sum_probs=31.1
Q ss_pred HHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEccce
Q 021410 20 KLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVT 96 (312)
Q Consensus 20 ~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a 96 (312)
++.+.|+.+.+||++++|++...+ .|.+++. ..+|.+ .. ...||||+..-|..
T Consensus 192 ~~~d~L~yl~~Dp~T~~I~ly~E~----~G~~~~d------------~~~f~~-------aa-~~~KPVV~lk~Grs 244 (300)
T PLN00125 192 NFVDCLEKFVKDPQTEGIILIGEI----GGTAEED------------AAAFIK-------ES-GTEKPVVAFIAGLT 244 (300)
T ss_pred CHHHHHHHHhhCCCCcEEEEEecc----CCchHHH------------HHHHHH-------Hh-cCCCCEEEEEecCC
Confidence 355667777777888888777752 1222221 112222 11 23899999988875
No 166
>PRK06494 enoyl-CoA hydratase; Provisional
Probab=49.38 E-value=74 Score=27.94 Aligned_cols=134 Identities=12% Similarity=0.090 Sum_probs=75.6
Q ss_pred ccceecccceeecCC-CeEEEeCceeEecCCCcccc--cCC-Cc--hH---HHhhhcChHH-HHHHHhcCCCCCHHHHHH
Q 021410 93 NGVTMGGGAGVSIPG-TFRVACGKTVFATPETLIGF--HPD-AG--AS---FYLSHLPGHL-GEFLALTGAKLNGAEMMA 162 (312)
Q Consensus 93 ~G~a~GgG~~lal~~-D~~ia~~~a~f~~pe~~~G~--~p~-~g--~~---~~l~r~~g~~-a~~l~ltg~~i~a~eA~~ 162 (312)
-|..+...|.+..++ |-++..+.+++|++-.--|. +|. .| -+ .+..+.+... |.++.+--+.++.++..+
T Consensus 108 gG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~lll~g~~~~a~eA~~~GLv~~vv~~~~l~~ 187 (259)
T PRK06494 108 GGFELALACDLIVAAENATFALPEPRVGLAALAGGLHRLPRQIGLKRAMGMILTGRRVTAREGLELGFVNEVVPAGELLA 187 (259)
T ss_pred HHHHHHHhCCEEEEeCCCEEeCcccccCCCCCchHHHHHHHHcCHHHHHHHHHcCCcCCHHHHHHcCCCcEecCHhHHHH
Confidence 344445555555554 56788888899985432222 221 12 11 2233445555 788877777777766554
Q ss_pred cCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcch-hhhH--HHHHHhhcCC-CCHHHHHHHHHccc
Q 021410 163 CGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHR--IDIVDKCFGL-DTVEEIIDSLESEA 238 (312)
Q Consensus 163 ~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~-~~~~~~~~~l~~~~ 238 (312)
...+.++.+ +..+|.++...|+.++......... .... ......+++. +..+++.++++|+.
T Consensus 188 -----------~a~~~a~~l---a~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~d~~eg~~af~~kr~ 253 (259)
T PRK06494 188 -----------AAERWADDI---LACSPLSIRASKQAVYRGLEVSLEEAITAQRDYPAVEARRASQDYIEGPKAFAEKRP 253 (259)
T ss_pred -----------HHHHHHHHH---HhcCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHccCC
Confidence 233455654 4568889998888887543322222 2222 2345667764 45566666677765
Q ss_pred CC
Q 021410 239 SL 240 (312)
Q Consensus 239 ~~ 240 (312)
+.
T Consensus 254 p~ 255 (259)
T PRK06494 254 PR 255 (259)
T ss_pred CC
Confidence 44
No 167
>PRK06091 membrane protein FdrA; Validated
Probab=47.15 E-value=62 Score=31.94 Aligned_cols=52 Identities=17% Similarity=0.169 Sum_probs=30.9
Q ss_pred HHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEcccee
Q 021410 21 LNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTM 97 (312)
Q Consensus 21 L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~ 97 (312)
+.+.++.+.+||++++|++.+..+ .+... + +++.....+.||||+..-|..-
T Consensus 240 ~~D~L~~L~~DP~TkvIvly~kpp-------------------aE~v~---~---~fl~aar~~~KPVVvlk~Grs~ 291 (555)
T PRK06091 240 ALTALEMLSADEKSEVIAFVSKPP-------------------AEAVR---L---KIINAMKATGKPVVALFLGYTP 291 (555)
T ss_pred HHHHHHHHhhCCCCcEEEEEEecC-------------------chHHH---H---HHHHHHhhCCCCEEEEEecCCc
Confidence 445566667777777777766431 01111 1 3334444569999999988654
No 168
>PRK00286 xseA exodeoxyribonuclease VII large subunit; Reviewed
Probab=46.86 E-value=31 Score=33.04 Aligned_cols=17 Identities=6% Similarity=0.151 Sum_probs=14.8
Q ss_pred HHHHHHhhCCCcEEEEE
Q 021410 76 SFIYLLGTHLKPHVAIL 92 (312)
Q Consensus 76 ~~~~~l~~~~kp~Iaav 92 (312)
.+.+++..+|.|||++|
T Consensus 215 ~v~~ai~~~~~Pvis~I 231 (438)
T PRK00286 215 AVARAIAASRIPVISAV 231 (438)
T ss_pred HHHHHHHcCCCCEEEec
Confidence 56788999999999976
No 169
>TIGR01929 menB naphthoate synthase (dihydroxynaphthoic acid synthetase). This model represents an enzyme, naphthoate synthase (dihydroxynaphthoic acid synthetase), which is involved in the fifth step of the menaquinone biosynthesis pathway. Together with o-succinylbenzoate-CoA ligase (menE: TIGR01923), this enzyme takes 2-succinylbenzoate and converts it into 1,4-di-hydroxy-2-naphthoate. Included above the trusted cutoff are two enzymes from Arabadopsis thaliana and one from Staphylococcus aureus which are identified as putative enoyl-CoA hydratase/isomerases. These enzymes group with the naphthoate synthases when building a tree and when doing BLAST searches.
Probab=46.70 E-value=48 Score=29.18 Aligned_cols=130 Identities=10% Similarity=-0.039 Sum_probs=70.1
Q ss_pred ecccceeecCC-CeEEEeCceeEecCCCcccc--cCCC-ch-----HHHhhhcChHH-HHHHHhcCCCCCHHHHHHcCcc
Q 021410 97 MGGGAGVSIPG-TFRVACGKTVFATPETLIGF--HPDA-GA-----SFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLA 166 (312)
Q Consensus 97 ~GgG~~lal~~-D~~ia~~~a~f~~pe~~~G~--~p~~-g~-----~~~l~r~~g~~-a~~l~ltg~~i~a~eA~~~Glv 166 (312)
+...|.+..++ +-+++.+.+++|+.-...|. +|.. |. ..+..+.+... +.++.+--+.++.++....
T Consensus 115 lalacD~~ia~~~a~f~~pe~~~G~~p~~~~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~--- 191 (259)
T TIGR01929 115 LHVVCDLTIAAENARFGQTGPKVGSFDGGYGSSYLARIVGQKKAREIWFLCRQYDAEQALDMGLVNTVVPLADLEKE--- 191 (259)
T ss_pred HHHhCCEEEecCCCEecCcccccccCCCccHHHHHHHHhHHHHHHHHHHhCCccCHHHHHHcCCcccccCHHHHHHH---
Confidence 33344444443 45677777777764322221 2221 11 11223344555 7888788888876665432
Q ss_pred ceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcC-CCCHHHHHHHHHcccCC
Q 021410 167 THYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFG-LDTVEEIIDSLESEASL 240 (312)
Q Consensus 167 ~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~ 240 (312)
..+.++.+ +..+|.+++..|+.+.................+..++. .+..+.+.++++|+.+.
T Consensus 192 --------a~~~a~~l---a~~~~~a~~~~K~~l~~~~~~~~~~~~~e~~~~~~~~~~~d~~egi~af~~kr~p~ 255 (259)
T TIGR01929 192 --------TVRWCREI---LQKSPMAIRMLKAALNADCDGQAGLQELAGNATMLFYMTEEGQEGRNAFLEKRQPD 255 (259)
T ss_pred --------HHHHHHHH---HhCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHhcCccHHHHHHHHhccCCCC
Confidence 33445554 45688888888888765432211111122345566665 55566677778887554
No 170
>PLN02921 naphthoate synthase
Probab=44.78 E-value=70 Score=29.35 Aligned_cols=90 Identities=12% Similarity=0.044 Sum_probs=55.7
Q ss_pred hhhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhh-H
Q 021410 137 LSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIH-R 214 (312)
Q Consensus 137 l~r~~g~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 214 (312)
..+.+... |.++.|--+.++.++... +..+.++.+ +..+|.+++..|+.+...... ...... .
T Consensus 228 tG~~~~A~eA~~~GLV~~vv~~~~l~~-----------~a~~~a~~l---a~~~p~al~~~K~~l~~~~~~-~~~~~~~~ 292 (327)
T PLN02921 228 LARFYTASEALKMGLVNTVVPLDELEG-----------ETVKWCREI---LRNSPTAIRVLKSALNAADDG-HAGLQELG 292 (327)
T ss_pred cCCcCCHHHHHHCCCceEEeCHHHHHH-----------HHHHHHHHH---HccCHHHHHHHHHHHHHhhcc-hhHHHHHH
Confidence 44555656 888888888888776544 233455655 456888898888887654322 122222 2
Q ss_pred HHHHHhhcC-CCCHHHHHHHHHcccCCC
Q 021410 215 IDIVDKCFG-LDTVEEIIDSLESEASLI 241 (312)
Q Consensus 215 ~~~~~~~~~-~~~~~~~~~~l~~~~~~~ 241 (312)
.+....++. .+..+++.++++|+.+.+
T Consensus 293 ~~~~~~~~~s~d~~egi~Af~ekr~p~f 320 (327)
T PLN02921 293 GNATLLFYGSEEGNEGRTAYLEGRAPDF 320 (327)
T ss_pred HHHHHHHhcCHHHHHHHHHHhccCCCCC
Confidence 245566664 556677777788886654
No 171
>PRK12478 enoyl-CoA hydratase; Provisional
Probab=44.29 E-value=39 Score=30.50 Aligned_cols=90 Identities=8% Similarity=-0.117 Sum_probs=58.5
Q ss_pred hhhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccC-C-Ccchhhh
Q 021410 137 LSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVY-P-DKNSVIH 213 (312)
Q Consensus 137 l~r~~g~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~ 213 (312)
..+.++.. |.++.|--+.+..++.... ..+.+..+ +..+|.+++..|+.++.... . .......
T Consensus 176 tg~~i~A~eA~~~GLV~~vv~~~~l~~~-----------a~~~a~~l---a~~~p~a~~~~K~~l~~~~~~~~l~~~~~~ 241 (298)
T PRK12478 176 TGRPLTGVQAAEAELINEAVPFERLEAR-----------VAEVATEL---ARIPLSQLQAQKLIVNQAYENMGLASTQTL 241 (298)
T ss_pred cCCccCHHHHHHcCCcceecCHHHHHHH-----------HHHHHHHH---HhCCHHHHHHHHHHHHHHHHhcchhHHHHH
Confidence 33555656 8888888888887775542 34455666 35688999999988875422 1 2233344
Q ss_pred HHHHHHhhcCCCCH---------HHHHHHHHcccCC
Q 021410 214 RIDIVDKCFGLDTV---------EEIIDSLESEASL 240 (312)
Q Consensus 214 ~~~~~~~~~~~~~~---------~~~~~~l~~~~~~ 240 (312)
.......++..++. +++-++++||.+.
T Consensus 242 e~~~~~~~~~s~d~~e~~~~~~~egv~Af~ekR~p~ 277 (298)
T PRK12478 242 GGILDGLMRNTPDALEFIRTAETQGVRAAVERRDGP 277 (298)
T ss_pred HHHHHHHHhcChhHHHHHHHHHHHHHHHHHHhcCCc
Confidence 45566777765555 4778889998654
No 172
>PRK05617 3-hydroxyisobutyryl-CoA hydrolase; Provisional
Probab=43.83 E-value=72 Score=29.44 Aligned_cols=155 Identities=12% Similarity=0.062 Sum_probs=81.2
Q ss_pred CCCcEEEEEccceecccceeecCC-CeEEEeCceeEecCCCccc--ccCCCchH-----HHhhhcChHH-HHHHHhcCCC
Q 021410 84 HLKPHVAILNGVTMGGGAGVSIPG-TFRVACGKTVFATPETLIG--FHPDAGAS-----FYLSHLPGHL-GEFLALTGAK 154 (312)
Q Consensus 84 ~~kp~Iaav~G~a~GgG~~lal~~-D~~ia~~~a~f~~pe~~~G--~~p~~g~~-----~~l~r~~g~~-a~~l~ltg~~ 154 (312)
..-+.++. |..+...|.+..++ |-+++.+.+.+|++-..-| .+|-.++. .+..+.++.. |.++.+--+.
T Consensus 107 VnG~a~Gg--G~~LalacD~ria~~~a~f~~pe~~lGl~P~~g~~~~L~r~~g~~a~~llltG~~i~A~eA~~~GLv~~v 184 (342)
T PRK05617 107 MDGIVMGG--GVGISAHGSHRIVTERTKMAMPETGIGFFPDVGGTYFLSRAPGALGTYLALTGARISAADALYAGLADHF 184 (342)
T ss_pred EcCEEEcc--HhHHhhhCCEEEEcCCCEeeCCccccCcCCCccceeEehhcccHHHHHHHHcCCCCCHHHHHHcCCccee
Confidence 34444443 55555666666655 5677778888888432222 12322221 1122344545 7777777777
Q ss_pred CCHHHHHHc------------------------------------CccceecCCCChhH-----------HHHHH-hhhh
Q 021410 155 LNGAEMMAC------------------------------------GLATHYSVSEKLPL-----------IEEEL-GKLV 186 (312)
Q Consensus 155 i~a~eA~~~------------------------------------Glv~~vv~~~~l~~-----------~~~~~-~~~~ 186 (312)
++.++.... ..+++++....+.. .+..+ .++.
T Consensus 185 v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~a~~~a~~i~ 264 (342)
T PRK05617 185 VPSADLPALLDALISLRWDSGADVVDAALAAFATPAPASELAAQRAWIDECFAGDTVEDIIAALEADGGEFAAKTADTLR 264 (342)
T ss_pred cCHHHHHHHHHHHHhcCCccchhHHHHHHHHhccCCCcchhHHHHHHHHHHhCCCCHHHHHHHHHhccHHHHHHHHHHHH
Confidence 777665432 11122222212111 13333 6778
Q ss_pred cCCHHHHHHHHHHhccccCCC-cchhhhHHHHHHhhcCCC-CHHHHHHHH-Hc-ccCC
Q 021410 187 TDDPSVIEACLEKYSDLVYPD-KNSVIHRIDIVDKCFGLD-TVEEIIDSL-ES-EASL 240 (312)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~l-~~-~~~~ 240 (312)
..+|.+++..|+.+....... .............++..+ ..+++-+++ +| +.++
T Consensus 265 ~~sp~a~~~~k~~l~~~~~~~l~~~~~~e~~~~~~~~~~~d~~egv~afl~ek~r~p~ 322 (342)
T PRK05617 265 SRSPTSLKVTLEQLRRARGLTLEECLRRELRLALAMLRSPDFVEGVRAVLIDKDRNPK 322 (342)
T ss_pred hCCcHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhCCchhhccceEEEcCCCCCC
Confidence 889999999999887653322 222333445566777544 445555554 55 5443
No 173
>PLN02600 enoyl-CoA hydratase
Probab=43.14 E-value=46 Score=29.13 Aligned_cols=120 Identities=13% Similarity=0.097 Sum_probs=67.6
Q ss_pred CeEEEeCceeEecCCCcccc--cCC-Cch-----HHHhhhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHH
Q 021410 108 TFRVACGKTVFATPETLIGF--HPD-AGA-----SFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLI 178 (312)
Q Consensus 108 D~~ia~~~a~f~~pe~~~G~--~p~-~g~-----~~~l~r~~g~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~ 178 (312)
|-+++.+...++++-.--|. +|. .|. ..+..+.+... +.++.+--+.++.++... +..+.
T Consensus 118 ~a~f~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~~~~-----------~a~~~ 186 (251)
T PLN02600 118 EAVFGLPETGLAIIPGAGGTQRLPRLVGRSRAKELIFTGRRIGAREAASMGLVNYCVPAGEAYE-----------KALEL 186 (251)
T ss_pred CCEEeCcccccCcCCCchHHHHHHHHhCHHHHHHHHHhCCccCHHHHHHcCCCcEeeChhHHHH-----------HHHHH
Confidence 44566666677764322221 221 111 11233445555 777777777777766544 23334
Q ss_pred HHHHhhhhcCCHHHHHHHHHHhccccCCCc-chhhhHHHHHHhhcC-CCCHHHHHHHHHcccCCC
Q 021410 179 EEELGKLVTDDPSVIEACLEKYSDLVYPDK-NSVIHRIDIVDKCFG-LDTVEEIIDSLESEASLI 241 (312)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~ 241 (312)
++.+ +..+|.+++.+|+.++....... .........+..++. .+..+++.++++|+.+.+
T Consensus 187 a~~l---a~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~d~~eg~~af~ekr~p~~ 248 (251)
T PLN02600 187 AQEI---NQKGPLAIKMAKKAINEGSEVDMASGLEIEEECYEQVLKTKDRLEGLAAFAEKRKPVY 248 (251)
T ss_pred HHHH---HhCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhcCCCCCC
Confidence 5544 55788899999998875433222 222334456677775 556677777788886543
No 174
>PRK08150 enoyl-CoA hydratase; Provisional
Probab=42.99 E-value=40 Score=29.63 Aligned_cols=122 Identities=13% Similarity=0.059 Sum_probs=66.5
Q ss_pred CeEEEeCceeEecCCCcccc--cCC-Cch--H---HHhhhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHH
Q 021410 108 TFRVACGKTVFATPETLIGF--HPD-AGA--S---FYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLI 178 (312)
Q Consensus 108 D~~ia~~~a~f~~pe~~~G~--~p~-~g~--~---~~l~r~~g~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~ 178 (312)
+-+++.+...+|++-..-|. +|. .|. + .+..+.+... |.++.+--+.+..++..+. ..+.
T Consensus 122 ~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~-----------a~~~ 190 (255)
T PRK08150 122 STYFALPEGQRGIFVGGGGSVRVPRLIGVARMTDMMLTGRVYDAQEGERLGLAQYLVPAGEALDK-----------AMEL 190 (255)
T ss_pred CCEEeccccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHHHHHcCCccEeeCchHHHHH-----------HHHH
Confidence 34566677777765432221 121 121 1 1222344545 7777777777776654332 2334
Q ss_pred HHHHhhhhcCCHHHHHHHHHHhccccCCC-cchhhhHHHHHHhhcC-CCCHHHHHHHHHcccCCCCc
Q 021410 179 EEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRIDIVDKCFG-LDTVEEIIDSLESEASLIND 243 (312)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~ 243 (312)
++.+ +..+|.+++..|+.++...... .............+++ .+..+++.++++|+.+.+.+
T Consensus 191 a~~l---a~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~d~~eg~~af~~kr~p~~~~ 254 (255)
T PRK08150 191 ARRI---AQNAPLTNFAVLNALPRIADMSADDGLFVESLMAAVAQSAPEAKERLRAFLEKKAAKVKP 254 (255)
T ss_pred HHHH---HhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhccCCCCCCC
Confidence 5554 4457888888888876543222 1222223344556665 55567777778888766543
No 175
>PRK07468 enoyl-CoA hydratase; Provisional
Probab=41.85 E-value=48 Score=29.21 Aligned_cols=89 Identities=13% Similarity=0.084 Sum_probs=54.2
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCC-cchhhhHHH
Q 021410 139 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRID 216 (312)
Q Consensus 139 r~~g~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 216 (312)
+.+... |.++.+-.+.+..++..+ ...+.++.+ +..+|.++...|+.++...... .........
T Consensus 168 ~~~~a~eA~~~Glv~~v~~~~~l~~-----------~~~~~a~~l---~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~ 233 (262)
T PRK07468 168 RLFDAEEAVRLGLLSRVVPAERLDA-----------AVEAEVTPY---LSCAPGAVAAAKALVRALGAPIDEAVIDATIE 233 (262)
T ss_pred CccCHHHHHHcCCcceecCHHHHHH-----------HHHHHHHHH---HhcCHHHHHHHHHHHHhhhccChHHHHHHHHH
Confidence 455555 888888888877655432 233445555 3457888888888876543222 222333455
Q ss_pred HHHhhcC-CCCHHHHHHHHHcccCCC
Q 021410 217 IVDKCFG-LDTVEEIIDSLESEASLI 241 (312)
Q Consensus 217 ~~~~~~~-~~~~~~~~~~l~~~~~~~ 241 (312)
.+..++. .+..+.+.++++|+.+.+
T Consensus 234 ~~~~~~~s~d~~e~~~af~~kr~~~~ 259 (262)
T PRK07468 234 ALADTWETEEAREGIAAFFDKRAPAW 259 (262)
T ss_pred HHHHHhcCHHHHHHHHHHHcCCCCCC
Confidence 6777776 455566767788876543
No 176
>PRK08258 enoyl-CoA hydratase; Provisional
Probab=40.11 E-value=51 Score=29.31 Aligned_cols=89 Identities=8% Similarity=0.021 Sum_probs=53.6
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCC-cchhhhHHH
Q 021410 139 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRID 216 (312)
Q Consensus 139 r~~g~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 216 (312)
+.+... |.++.+--+.++.++... ...+.+..+ +..+|.+++..|+.++...... .........
T Consensus 183 ~~~~a~eA~~~Glv~~vv~~~~l~~-----------~a~~~a~~l---a~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~ 248 (277)
T PRK08258 183 RSMSAEEGERWGFFNRLVEPEELLA-----------EAQALARRL---AAGPTFAHGMTKTMLHQEWDMGLEEAIEAEAQ 248 (277)
T ss_pred CCCCHHHHHHcCCCcEecCHHHHHH-----------HHHHHHHHH---HhCCHHHHHHHHHHHHhhccCCHHHHHHHHHH
Confidence 344444 777777777776655432 133445544 4568889999999887653322 222333445
Q ss_pred HHHhhcCC-CCHHHHHHHHHcccCCC
Q 021410 217 IVDKCFGL-DTVEEIIDSLESEASLI 241 (312)
Q Consensus 217 ~~~~~~~~-~~~~~~~~~l~~~~~~~ 241 (312)
.+..++.. +..+++.++++|+.+.+
T Consensus 249 ~~~~~~~s~d~~eg~~af~ekr~p~~ 274 (277)
T PRK08258 249 AQAICMQTEDFRRAYEAFVAKRKPVF 274 (277)
T ss_pred HHHHHhcCchHHHHHHHHhcCCCCCC
Confidence 67777764 55566667788876543
No 177
>PRK09076 enoyl-CoA hydratase; Provisional
Probab=39.44 E-value=57 Score=28.65 Aligned_cols=130 Identities=13% Similarity=0.098 Sum_probs=71.2
Q ss_pred cccceeecC-CCeEEEeCceeEecCCCcccc--cCC-Cch--H---HHhhhcChHH-HHHHHhcCCCCCHHHHHHcCccc
Q 021410 98 GGGAGVSIP-GTFRVACGKTVFATPETLIGF--HPD-AGA--S---FYLSHLPGHL-GEFLALTGAKLNGAEMMACGLAT 167 (312)
Q Consensus 98 GgG~~lal~-~D~~ia~~~a~f~~pe~~~G~--~p~-~g~--~---~~l~r~~g~~-a~~l~ltg~~i~a~eA~~~Glv~ 167 (312)
...|.+..+ .+-++..+..++|++-...|. +|. .|. + .+..+.+... |.++.+--+.++.++..+
T Consensus 114 alacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~----- 188 (258)
T PRK09076 114 ALACDIRIAEEQAQMALPEASVGLLPCAGGTQNLPWLVGEGWAKRMILCGERVDAATALRIGLVEEVVEKGEARE----- 188 (258)
T ss_pred HHhCCEEEecCCCEeeCcccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHHHHHCCCCceecCchhHHH-----
Confidence 333443333 445677777777774322111 221 111 1 1223445555 777777777777665433
Q ss_pred eecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCC-cchhhhHHHHHHhhcC-CCCHHHHHHHHHcccCCC
Q 021410 168 HYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRIDIVDKCFG-LDTVEEIIDSLESEASLI 241 (312)
Q Consensus 168 ~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~ 241 (312)
+..+.++.+ +..+|.+++..|+.++...... ..........+..++. .+..+.+.++++|+.+.+
T Consensus 189 ------~a~~~a~~l---~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~eg~~af~~kr~p~~ 255 (258)
T PRK09076 189 ------AALALAQKV---ANQSPSAVAACKTLIQAARNGPRAAALALERELFVDLFDTEDQREGVNAFLEKRAPQW 255 (258)
T ss_pred ------HHHHHHHHH---HhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCchHHHHHHHHhcCCCCCC
Confidence 233445544 4568888988888876543222 2223334456777776 455566666788876554
No 178
>PRK07854 enoyl-CoA hydratase; Provisional
Probab=39.08 E-value=56 Score=28.44 Aligned_cols=54 Identities=13% Similarity=0.160 Sum_probs=32.5
Q ss_pred hcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcC-CCCHHHHHHHHHcccCC
Q 021410 186 VTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFG-LDTVEEIIDSLESEASL 240 (312)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~ 240 (312)
+..+|.++...|+.+... ................++. .+..+.+.++++|+.+.
T Consensus 185 ~~~~~~a~~~~K~~l~~~-~~~~~~~~~e~~~~~~~~~~~d~~eg~~af~~kr~p~ 239 (243)
T PRK07854 185 AGLAPLALQHAKRVLNDD-GAIEEAWPAHKELFDKAWASQDAIEAQVARIEKRPPK 239 (243)
T ss_pred HhCCHHHHHHHHHHHHcc-CCHHHHHHHHHHHHHHHhcCchHHHHHHHHhCCCCCC
Confidence 456788888888887654 2112222233455667775 44556666677877554
No 179
>PRK06072 enoyl-CoA hydratase; Provisional
Probab=39.00 E-value=50 Score=28.84 Aligned_cols=65 Identities=12% Similarity=-0.046 Sum_probs=39.7
Q ss_pred ChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCc-chhhhHHHHHHhhcC-CCCHHHHHHHHHcccCCC
Q 021410 174 KLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDK-NSVIHRIDIVDKCFG-LDTVEEIIDSLESEASLI 241 (312)
Q Consensus 174 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~ 241 (312)
+..+.++.+ +..+|.++...|+.++....... .......+....++. .+..+.+.++++|+.+.+
T Consensus 179 ~a~~~a~~l---a~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~~~d~~eg~~af~~kr~p~~ 245 (248)
T PRK06072 179 DAEEMANRI---SNGPFQSYIAAKRMINLVLYNDLEEFLEYESAIQGYLGKTEDFKEGISSFKEKREPKF 245 (248)
T ss_pred HHHHHHHHH---HhCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHhCChhHHHHHHHHhcCCCCCC
Confidence 344566655 45688899999988875433222 222333455667775 455667777788876543
No 180
>PRK07112 polyketide biosynthesis enoyl-CoA hydratase; Validated
Probab=38.53 E-value=52 Score=28.84 Aligned_cols=87 Identities=10% Similarity=-0.051 Sum_probs=46.8
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHH
Q 021410 139 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDI 217 (312)
Q Consensus 139 r~~g~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (312)
+.+... |.++.+-.+.++..+.. +. ++ ++ ++...+|.+++.+|+.+.................
T Consensus 164 ~~~~a~eA~~~Glv~~vv~~~~~~----~~------~~---a~---~l~~~~p~a~~~~K~~~~~~~~~~~~~~~~e~~~ 227 (255)
T PRK07112 164 QPVTAQQAFSWGLVDAYGANSDTL----LR------KH---LL---RLRCLNKAAVARYKSYASTLDDTVAAARPAALAA 227 (255)
T ss_pred CcccHHHHHHcCCCceecCcHHHH----HH------HH---HH---HHHhCCHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 344445 77776666666544421 11 11 22 2355678888888887764322112222223345
Q ss_pred HHhhcC-CCCHHHHHHHHHcccCCC
Q 021410 218 VDKCFG-LDTVEEIIDSLESEASLI 241 (312)
Q Consensus 218 ~~~~~~-~~~~~~~~~~l~~~~~~~ 241 (312)
...++. .+..+++.++++|+.+.+
T Consensus 228 ~~~~~~~~~~~eg~~af~~kr~p~~ 252 (255)
T PRK07112 228 NIEMFADPENLRKIARYVETGKFPW 252 (255)
T ss_pred HHHHHcChHHHHHHHHHHcCCCCCC
Confidence 556665 455666667788875543
No 181
>PRK06142 enoyl-CoA hydratase; Provisional
Probab=37.09 E-value=62 Score=28.65 Aligned_cols=127 Identities=9% Similarity=0.064 Sum_probs=69.0
Q ss_pred cceeecCC-CeEEEeCceeEecCCCccc--ccCC-CchH-----HHhhhcChHH-HHHHHhcCCCCCH-HHHHHcCccce
Q 021410 100 GAGVSIPG-TFRVACGKTVFATPETLIG--FHPD-AGAS-----FYLSHLPGHL-GEFLALTGAKLNG-AEMMACGLATH 168 (312)
Q Consensus 100 G~~lal~~-D~~ia~~~a~f~~pe~~~G--~~p~-~g~~-----~~l~r~~g~~-a~~l~ltg~~i~a-~eA~~~Glv~~ 168 (312)
.|.+..++ +-+++.+.+++|++-..-| .+|. .|.. .+..+.+... |.++.|--+.+.. ++..+
T Consensus 130 acD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l~l~g~~~~a~eA~~~GLv~~vv~~~~~l~~------ 203 (272)
T PRK06142 130 ACDMRYASADAKFSVREVDLGMVADVGSLQRLPRIIGDGHLRELALTGRDIDAAEAEKIGLVNRVYDDADALLA------ 203 (272)
T ss_pred hCCEEEecCCCeecchhhhhCCCCCchHHHHHHHHhCHHHHHHHHHhCCCcCHHHHHHcCCccEecCCHHHHHH------
Confidence 34433333 4456666677776432111 1222 1111 1233455555 8888888788764 55443
Q ss_pred ecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCC-cchhhhHHHHHHhhcC-CCCHHHHHHHHHcccCC
Q 021410 169 YSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRIDIVDKCFG-LDTVEEIIDSLESEASL 240 (312)
Q Consensus 169 vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~ 240 (312)
...+.++.+ +..+|.+++..|+.++...... .............++. .+..+++.++++++.+.
T Consensus 204 -----~a~~~a~~i---a~~~~~a~~~~K~~l~~~~~~~l~~~~~~~~~~~~~~~~~~d~~egv~af~~kr~p~ 269 (272)
T PRK06142 204 -----AAHATAREI---AAKSPLAVRGTKEVLDYMRDHRVADGLRYVATWNAAMLPSKDLTEAIAAHMEKRPPE 269 (272)
T ss_pred -----HHHHHHHHH---HhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCccHHHHHHHHhcCCCCC
Confidence 234455555 3458889999998887543222 2223333455666775 55557777778887554
No 182
>PRK07659 enoyl-CoA hydratase; Provisional
Probab=36.61 E-value=68 Score=28.20 Aligned_cols=88 Identities=13% Similarity=0.027 Sum_probs=50.7
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCc-chhhhHHH
Q 021410 139 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDK-NSVIHRID 216 (312)
Q Consensus 139 r~~g~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 216 (312)
+.++.. +.++.+--+.+ .++..+ ...+.++.+ +..+|.++...|+.++....... ........
T Consensus 167 ~~~~a~eA~~~Glv~~vv-~~~~~~-----------~a~~~a~~l---~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~ 231 (260)
T PRK07659 167 KKLSATEALDLGLIDEVI-GGDFQT-----------AAKQKISEW---LQKPLKAMIETKQIYCELNRSQLEQVLQLEKR 231 (260)
T ss_pred CccCHHHHHHcCChHHHh-hhHHHH-----------HHHHHHHHH---HhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHH
Confidence 445555 66666666665 444322 123345444 45688899999998875433322 22233344
Q ss_pred HHHhhcC-CCCHHHHHHHHHcccCCC
Q 021410 217 IVDKCFG-LDTVEEIIDSLESEASLI 241 (312)
Q Consensus 217 ~~~~~~~-~~~~~~~~~~l~~~~~~~ 241 (312)
....++. .+..+.+.++++|+.+.+
T Consensus 232 ~~~~~~~~~~~~egi~af~~kr~p~~ 257 (260)
T PRK07659 232 AQYAMRQTADHKEGIRAFLEKRLPVF 257 (260)
T ss_pred HHHHHhcCHhHHHHHHHHhcCCCCCC
Confidence 5666775 555677777788876543
No 183
>TIGR03210 badI 2-ketocyclohexanecarboxyl-CoA hydrolase. Members of this protein family are 2-ketocyclohexanecarboxyl-CoA hydrolase, a ring-opening enzyme that acts in catabolism of molecules such as benzoyl-CoA and cyclohexane carboxylate. It converts -ketocyclohexanecarboxyl-CoA to pimelyl-CoA. It is not sensitive to oxygen.
Probab=36.26 E-value=78 Score=27.75 Aligned_cols=89 Identities=10% Similarity=0.046 Sum_probs=52.4
Q ss_pred hhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHH
Q 021410 138 SHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRID 216 (312)
Q Consensus 138 ~r~~g~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (312)
.+.++.. |.++.+--+.++.++..+. ..+.++.+ +..+|.+++..|+.++...............
T Consensus 162 g~~~~a~eA~~~Glv~~vv~~~~l~~~-----------a~~~a~~i---a~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~ 227 (256)
T TIGR03210 162 CRRYTAQEALAMGLVNAVVPHDQLDAE-----------VQKWCDEI---VEKSPTAIAIAKRSFNMDTAHQRGIAGMGMY 227 (256)
T ss_pred CCCcCHHHHHHcCCceeeeCHHHHHHH-----------HHHHHHHH---HhCCHHHHHHHHHHHHHhhcccchHHHHHHH
Confidence 3455556 8888887788877664432 33455555 3457888888888776542211111111234
Q ss_pred HHHhhcC-CCCHHHHHHHHHcccCC
Q 021410 217 IVDKCFG-LDTVEEIIDSLESEASL 240 (312)
Q Consensus 217 ~~~~~~~-~~~~~~~~~~l~~~~~~ 240 (312)
....+++ .+..+++.++++|+.+.
T Consensus 228 ~~~~~~~~~d~~e~~~af~~kr~p~ 252 (256)
T TIGR03210 228 ALKLYYDTAESREGVKAFQEKRKPE 252 (256)
T ss_pred HHHHHccChhHHHHHHHHhccCCCC
Confidence 5566775 55667777778887554
No 184
>PRK06563 enoyl-CoA hydratase; Provisional
Probab=35.97 E-value=70 Score=27.99 Aligned_cols=120 Identities=15% Similarity=0.052 Sum_probs=65.0
Q ss_pred CeEEEeCceeEecCCCcccc--cCC-Cch--H---HHhhhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHH
Q 021410 108 TFRVACGKTVFATPETLIGF--HPD-AGA--S---FYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLI 178 (312)
Q Consensus 108 D~~ia~~~a~f~~pe~~~G~--~p~-~g~--~---~~l~r~~g~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~ 178 (312)
+-++..+...+|++-..-|. +|. .|. + .+..+.++.. |.++.+--+.++.++... +..+.
T Consensus 122 ~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~-----------~a~~~ 190 (255)
T PRK06563 122 NTRFAQLEVQRGILPFGGATLRFPQAAGWGNAMRYLLTGDEFDAQEALRLGLVQEVVPPGEQLE-----------RAIEL 190 (255)
T ss_pred CCEEeChhhhcCCCCCccHHHHHHHHhhHHHHHHHHHcCCCcCHHHHHHcCCCcEeeCHHHHHH-----------HHHHH
Confidence 44566666677764322121 221 121 1 1233455555 778777777777665432 12334
Q ss_pred HHHHhhhhcCCHHHHHHHHHHhccccCCCc-chhhhHHHHHHhhcCC-CCHHHHHHHHHcccCCC
Q 021410 179 EEELGKLVTDDPSVIEACLEKYSDLVYPDK-NSVIHRIDIVDKCFGL-DTVEEIIDSLESEASLI 241 (312)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~ 241 (312)
++.+ +..+|.+++..|+.++....... .........+..+++. +..+.+.++++|+.+.+
T Consensus 191 a~~l---a~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~~~d~~eg~~af~~kr~p~~ 252 (255)
T PRK06563 191 AERI---ARAAPLGVQATLASARAAVREGEAAAAAQLPPELRPLFTSEDAKEGVQAFLERRPARF 252 (255)
T ss_pred HHHH---HhcCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCchHHHHHHHHhcCCCCCC
Confidence 5555 34578888888888765432222 2222334566777764 45566777788876543
No 185
>TIGR03189 dienoyl_CoA_hyt cyclohexa-1,5-dienecarbonyl-CoA hydratase. This enzyme, cyclohexa-1,5-dienecarbonyl-CoA hydratase, also called dienoyl-CoA hydratase, acts on the product of benzoyl-CoA reductase (EC 1.3.99.15). Benzoyl-CoA is a common intermediate in the degradation of many aromatic compounds, and this enzyme is part of an anaerobic pathway for dearomatization and degradation.
Probab=35.38 E-value=78 Score=27.70 Aligned_cols=88 Identities=15% Similarity=0.100 Sum_probs=47.1
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcch-hh-hHH
Q 021410 139 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNS-VI-HRI 215 (312)
Q Consensus 139 r~~g~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~ 215 (312)
+.+... |.++.+--+.++..+. ..+...++.+ +..+|.+++..|+.++......... .. ...
T Consensus 157 ~~~~a~eA~~~Glv~~v~~~~~~------------~a~~~~a~~l---a~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~ 221 (251)
T TIGR03189 157 RSIDGAEGARIGLANAVAEDPEN------------AALAWFDEHP---AKLSASSLRFAVRAARLGMNERVKAKIAEVEA 221 (251)
T ss_pred CCCCHHHHHHCCCcceecCcHHH------------HHHHHHHHHH---HhCCHHHHHHHHHHHHhhhcccHHHHHHHHHH
Confidence 344555 7777666666653221 1122123333 3457788888888776543222221 21 223
Q ss_pred HHHHhhcC-CCCHHHHHHHHHcccCCC
Q 021410 216 DIVDKCFG-LDTVEEIIDSLESEASLI 241 (312)
Q Consensus 216 ~~~~~~~~-~~~~~~~~~~l~~~~~~~ 241 (312)
..+..++. .+..+.+.++++|+.+.+
T Consensus 222 ~~~~~~~~s~d~~eg~~af~ekr~p~~ 248 (251)
T TIGR03189 222 LYLEELMATHDAVEGLNAFLEKRPALW 248 (251)
T ss_pred HHHHHHhCCHhHHHHHHHHHhcCCCCC
Confidence 44566775 455677777788886543
No 186
>PRK06127 enoyl-CoA hydratase; Provisional
Probab=35.26 E-value=60 Score=28.72 Aligned_cols=134 Identities=14% Similarity=0.192 Sum_probs=73.8
Q ss_pred cceecccceeecCC-CeEEEeCceeEecCCCcccc--cCC-Cch--H---HHhhhcChHH-HHHHHhcCCCCCHHHHHHc
Q 021410 94 GVTMGGGAGVSIPG-TFRVACGKTVFATPETLIGF--HPD-AGA--S---FYLSHLPGHL-GEFLALTGAKLNGAEMMAC 163 (312)
Q Consensus 94 G~a~GgG~~lal~~-D~~ia~~~a~f~~pe~~~G~--~p~-~g~--~---~~l~r~~g~~-a~~l~ltg~~i~a~eA~~~ 163 (312)
|..+...|.+.+++ +-+++.+...+|+.-.--|. +|. .|. + .+..+.+... |.++.+--+.++.++...
T Consensus 121 G~~LalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~- 199 (269)
T PRK06127 121 GMGIALACDIRIAAEDSRFGIPAARLGLGYGYDGVKNLVDLVGPSAAKDLFYTARRFDAAEALRIGLVHRVTAADDLET- 199 (269)
T ss_pred HHHHHHhCCEEEeeCCCEeeCchhhhCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCCCEeeCHHHHHH-
Confidence 33444444444443 45677778888874322221 222 111 1 1223345555 788888888887666443
Q ss_pred CccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCC-cchhhhHHHHHHhhcCC-CCHHHHHHHHHcccCCC
Q 021410 164 GLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRIDIVDKCFGL-DTVEEIIDSLESEASLI 241 (312)
Q Consensus 164 Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~ 241 (312)
+..+.++.++ ..+|.+++..|+.+....... ..........+..++.. +..+.+.++++|+.+.+
T Consensus 200 ----------~a~~~a~~l~---~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~d~~e~~~af~ekr~p~~ 266 (269)
T PRK06127 200 ----------ALADYAATIA---GNAPLTLRAAKRAIAELLKDEPERDMAACQALVAACFDSEDYREGRAAFMEKRKPVF 266 (269)
T ss_pred ----------HHHHHHHHHH---hCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhcChHHHHHHHHHhcCCCCCC
Confidence 2334455553 357888888888876543322 22233344567777764 45566666788875543
No 187
>PRK03580 carnitinyl-CoA dehydratase; Provisional
Probab=34.94 E-value=85 Score=27.57 Aligned_cols=121 Identities=13% Similarity=0.058 Sum_probs=64.6
Q ss_pred CCeEEEeCceeEecCCCcccc--cCC-Cch--H---HHhhhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhH
Q 021410 107 GTFRVACGKTVFATPETLIGF--HPD-AGA--S---FYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPL 177 (312)
Q Consensus 107 ~D~~ia~~~a~f~~pe~~~G~--~p~-~g~--~---~~l~r~~g~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~ 177 (312)
.+-+++.+...+|++-...|. +|. .|. + .+..+.+... |.++.+--+.++.++..+ +...
T Consensus 123 ~~a~f~~pe~~~G~~p~~g~~~~l~~~vg~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~-----------~a~~ 191 (261)
T PRK03580 123 DNASFALPEAKLGIVPDSGGVLRLPKRLPPAIANEMVMTGRRMDAEEALRWGIVNRVVPQAELMD-----------RARE 191 (261)
T ss_pred CCCEEeCcccccCcCCCccHHHHHHHHhCHHHHHHHHHhCCccCHHHHHHcCCCcEecCHhHHHH-----------HHHH
Confidence 356677778888875432221 221 111 1 1222344445 777777777777665433 1223
Q ss_pred HHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhH-H----HHHHhhcC-CCCHHHHHHHHHcccCCC
Q 021410 178 IEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHR-I----DIVDKCFG-LDTVEEIIDSLESEASLI 241 (312)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~-~~~~~~~~~~l~~~~~~~ 241 (312)
.++.+ +..+|.+++..|+.++............. . ..+..++. .+..+++.++++|+.+.+
T Consensus 192 ~a~~l---a~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~d~~e~~~af~ekr~~~~ 258 (261)
T PRK03580 192 LAQQL---VNSAPLAIAALKEIYRETSEMPVEEAYRYIRSGVLKHYPSVLHSEDALEGPRAFAEKRDPVW 258 (261)
T ss_pred HHHHH---HhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHhhhHHHHHHHhcCccHHHHHHHHhcCCCCCC
Confidence 34444 35578888888888765432221111111 1 24566775 455567777788875543
No 188
>PRK07396 dihydroxynaphthoic acid synthetase; Validated
Probab=34.67 E-value=75 Score=28.19 Aligned_cols=130 Identities=8% Similarity=-0.037 Sum_probs=68.6
Q ss_pred ecccceeecCC-CeEEEeCceeEecCCCcccc--cCC-CchH-----HHhhhcChHH-HHHHHhcCCCCCHHHHHHcCcc
Q 021410 97 MGGGAGVSIPG-TFRVACGKTVFATPETLIGF--HPD-AGAS-----FYLSHLPGHL-GEFLALTGAKLNGAEMMACGLA 166 (312)
Q Consensus 97 ~GgG~~lal~~-D~~ia~~~a~f~~pe~~~G~--~p~-~g~~-----~~l~r~~g~~-a~~l~ltg~~i~a~eA~~~Glv 166 (312)
+...|.+..++ |-+++.+..++|+.-...|. +|. .|.. .+..+.++.. |.++.|--+.++.++..+.
T Consensus 125 lalacD~ria~~~a~f~~pe~~~Gl~p~~~~~~~l~~~vG~~~a~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~--- 201 (273)
T PRK07396 125 LHLVCDLTIAADNAIFGQTGPKVGSFDGGYGASYLARIVGQKKAREIWFLCRQYDAQEALDMGLVNTVVPLADLEKE--- 201 (273)
T ss_pred HHHhCCEEEeeCCcEEecccccccccCCchHHHHHHHHhhHHHHHHHHHhCCCcCHHHHHHcCCcCeecCHHHHHHH---
Confidence 33444444433 45566666667654332222 221 1111 1233455555 8888888888877665432
Q ss_pred ceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhh-hHHHHHHhhcC-CCCHHHHHHHHHcccCCC
Q 021410 167 THYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVI-HRIDIVDKCFG-LDTVEEIIDSLESEASLI 241 (312)
Q Consensus 167 ~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~ 241 (312)
....++.+ +..+|.+++.+|+.++..... ..... ........+++ .+..+.+.++++|+.+.+
T Consensus 202 --------a~~~a~~l---a~~~~~a~~~~K~~l~~~~~~-~~~~~~~e~~~~~~~~~~~d~~egi~af~~kr~p~~ 266 (273)
T PRK07396 202 --------TVRWCREM---LQNSPMALRCLKAALNADCDG-QAGLQELAGNATMLFYMTEEAQEGRNAFNEKRQPDF 266 (273)
T ss_pred --------HHHHHHHH---HhCCHHHHHHHHHHHHhhhcc-HHHHHHHHHHHHHHHhcChhHHHHHHHHhCCCCCCC
Confidence 22344544 355788888888877654221 11111 22344556665 455566777788876543
No 189
>PRK07509 enoyl-CoA hydratase; Provisional
Probab=34.02 E-value=71 Score=28.04 Aligned_cols=61 Identities=8% Similarity=0.026 Sum_probs=36.7
Q ss_pred HHHHHHhhhhcCCHHHHHHHHHHhccccCCC-cchhhhHHHHHHhhcC-CCCHHHHHHHHHcccCC
Q 021410 177 LIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRIDIVDKCFG-LDTVEEIIDSLESEASL 240 (312)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~ 240 (312)
+.++.+ +..+|.++...|+.++...... .............++. .+..+++.++++|+.+.
T Consensus 197 ~~a~~l---~~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~d~~e~~~af~ekr~p~ 259 (262)
T PRK07509 197 ALAREI---AQRSPDAIAAAKRLINRSWTASVRALLARESVEQIRLLLGKNQKIAVKAQMKKRAPK 259 (262)
T ss_pred HHHHHH---HhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcChhHHHHHHHHhcCCCCC
Confidence 445555 4557888888888876543222 2222333455666665 56667777788887554
No 190
>PRK08321 naphthoate synthase; Validated
Probab=33.86 E-value=79 Score=28.55 Aligned_cols=134 Identities=10% Similarity=0.043 Sum_probs=75.2
Q ss_pred ccceecccceeecCC--CeEEEeCceeEecCCCccc--ccCC-CchH-----HHhhhcChHH-HHHHHhcCCCCCHHHHH
Q 021410 93 NGVTMGGGAGVSIPG--TFRVACGKTVFATPETLIG--FHPD-AGAS-----FYLSHLPGHL-GEFLALTGAKLNGAEMM 161 (312)
Q Consensus 93 ~G~a~GgG~~lal~~--D~~ia~~~a~f~~pe~~~G--~~p~-~g~~-----~~l~r~~g~~-a~~l~ltg~~i~a~eA~ 161 (312)
-|..+...|.+.+++ |-+++-+.+.+++.-...| .+|. .|.. .+..+.++.. |.++.+--+.+..++..
T Consensus 149 gG~~lalacD~ria~~~~a~f~~pe~~~Gl~p~~~~~~~L~r~vG~~~A~~l~ltG~~~~A~eA~~~GLv~~vv~~~~l~ 228 (302)
T PRK08321 149 GGHSLHVVCDLTLASREHARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRTYSAEEAHDMGAVNAVVPHAELE 228 (302)
T ss_pred HHHHHHHhCCEEEEecCCCEEECCccccccCCCchHHHHHHHHhCHHHHHHHHHcCCccCHHHHHHCCCceEeeCHHHHH
Confidence 455566667777777 4778888888875422212 1222 1211 1223344555 77777777777766544
Q ss_pred HcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcC-CCCHHHHHHHHHcccCC
Q 021410 162 ACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFG-LDTVEEIIDSLESEASL 240 (312)
Q Consensus 162 ~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~ 240 (312)
+ +..+.++.+ +..+|.+++..|+.+....................++. .+..+++.++++|+.+.
T Consensus 229 ~-----------~a~~~a~~l---a~~~~~a~~~~K~~l~~~~~~~~~~~~~e~~~~~~~~~~~d~~egi~af~ekr~p~ 294 (302)
T PRK08321 229 T-----------EALEWAREI---NGKSPTAMRMLKYAFNLTDDGLVGQQLFAGEATRLAYMTDEAQEGRDAFLEKRDPD 294 (302)
T ss_pred H-----------HHHHHHHHH---HhCCHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHhcCHHHHHHHHHHhccCCCC
Confidence 3 123344544 45578888888888765432222222223445666776 45556677778887654
No 191
>PRK05981 enoyl-CoA hydratase; Provisional
Probab=33.77 E-value=67 Score=28.31 Aligned_cols=90 Identities=14% Similarity=0.037 Sum_probs=53.0
Q ss_pred hhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCC-cchhhhHH
Q 021410 138 SHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRI 215 (312)
Q Consensus 138 ~r~~g~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 215 (312)
.+.++.. |.++.+--+.+..++..+ +..+.+..+ +..+|.++...|+.+....... ........
T Consensus 171 g~~~~a~eA~~~Glv~~vv~~~~~~~-----------~a~~~a~~l---~~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~ 236 (266)
T PRK05981 171 GEKLPAETALQWGLVNRVVDDAELMA-----------EAMKLAHEL---ANGPTVALGLIRKLYWDSPENDFEEQLNLER 236 (266)
T ss_pred CCCcCHHHHHHcCCceEeeCHhHHHH-----------HHHHHHHHH---HcCCHHHHHHHHHHHHHhhhcCHHHHHHHHH
Confidence 3445555 777777777777666544 123345554 3457778888888776543222 22233344
Q ss_pred HHHHhhcC-CCCHHHHHHHHHcccCCC
Q 021410 216 DIVDKCFG-LDTVEEIIDSLESEASLI 241 (312)
Q Consensus 216 ~~~~~~~~-~~~~~~~~~~l~~~~~~~ 241 (312)
..+..++. .+..+.+.++++|+.+.+
T Consensus 237 ~~~~~~~~s~d~~e~~~af~~kr~~~~ 263 (266)
T PRK05981 237 EAQRIAGKTEDFKEGVGAFLQKRPAQF 263 (266)
T ss_pred HHHHHHhcChhHHHHHHHHhcCCCCCC
Confidence 55667775 455677777788876543
No 192
>TIGR02280 PaaB1 phenylacetate degradation probable enoyl-CoA hydratase paaB. This family of proteins are found within apparent operons for the degradation of phenylacetic acid. These proteins contain the enoyl-CoA hydratase domain as detected by pfam00378. This activity is consistent with current hypotheses for the degradation pathway which involve the ligation of phenylacetate with coenzyme A (paaF), hydroxylation (paaGHIJK), ring-opening (paaN) and degradation of the resulting fatty acid-like compound to a Krebs cycle intermediate (paaABCDE).
Probab=32.88 E-value=82 Score=27.57 Aligned_cols=90 Identities=9% Similarity=-0.011 Sum_probs=54.1
Q ss_pred hhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCc-chhhhHH
Q 021410 138 SHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDK-NSVIHRI 215 (312)
Q Consensus 138 ~r~~g~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 215 (312)
.+.+... |.++.+--+.++.++..+. ..+.++.+ +..+|.++..+|+.++....... .......
T Consensus 161 g~~~~a~eA~~~Glv~~vv~~~~l~~~-----------a~~~a~~l---a~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~ 226 (256)
T TIGR02280 161 GEKLDARTAASWGLIWQVVDDAALMDE-----------AQALAVHL---AAQPTRGLALTKRAIQAAATNSLDTQLDLER 226 (256)
T ss_pred CCCCCHHHHHHcCCcceeeChHHHHHH-----------HHHHHHHH---HhCCHHHHHHHHHHHHhhhcCCHHHHHHHHH
Confidence 3445555 7787777777777665442 33445555 34578888888888865433222 2222334
Q ss_pred HHHHhhcC-CCCHHHHHHHHHcccCCC
Q 021410 216 DIVDKCFG-LDTVEEIIDSLESEASLI 241 (312)
Q Consensus 216 ~~~~~~~~-~~~~~~~~~~l~~~~~~~ 241 (312)
.....++. .+..+.+.++++|+.+.+
T Consensus 227 ~~~~~~~~~~d~~eg~~af~~kr~p~~ 253 (256)
T TIGR02280 227 DLQRELGRSADYAEGVTAFLDKRNPQF 253 (256)
T ss_pred HHHHHHhcChhHHHHHHHHHcCCCCCC
Confidence 55667775 555566667788876543
No 193
>cd04241 AAK_FomA-like AAK_FomA-like: This CD includes a fosfomycin biosynthetic gene product, FomA, and similar proteins found in a wide range of organisms. Together, the fomA and fomB genes in the fosfomycin biosynthetic gene cluster of Streptomyces wedmorensis confer high-level fosfomycin resistance. FomA and FomB proteins converted fosfomycin to fosfomycin monophosphate and fosfomycin diphosphate in the presence of ATP and a magnesium ion, indicating that FomA and FomB catalyzed phosphorylations of fosfomycin and fosfomycin monophosphate, respectively. FomA and related sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK).
Probab=32.36 E-value=88 Score=27.24 Aligned_cols=39 Identities=8% Similarity=0.124 Sum_probs=29.8
Q ss_pred ecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCc
Q 021410 4 LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRA 45 (312)
Q Consensus 4 ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~ 45 (312)
|..++....++.+.++++.+.+.++. ..++|+++|.|..
T Consensus 11 l~~~~~~~~~~~~~l~~l~~~l~~l~---g~~vvlVhGgg~~ 49 (252)
T cd04241 11 ITDKDRPETIREENLERIARELAEAI---DEKLVLVHGGGSF 49 (252)
T ss_pred EEcCCCCCccCHHHHHHHHHHHHhcc---CCCEEEEECCCcc
Confidence 34444456799999999999998876 5789999986643
No 194
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=32.22 E-value=1.2e+02 Score=27.32 Aligned_cols=23 Identities=26% Similarity=0.520 Sum_probs=18.0
Q ss_pred HHHHHHHHhhcCCCceEEEEEeC
Q 021410 20 KLNKLFKAWENDPNIGFVSMKGS 42 (312)
Q Consensus 20 ~L~~~l~~~~~d~~v~~vvl~g~ 42 (312)
++.+.++.+.+||++++|++...
T Consensus 185 ~~~D~l~~l~~Dp~T~~I~lylE 207 (286)
T TIGR01019 185 SFIDVLEAFEKDPETEAIVMIGE 207 (286)
T ss_pred CHHHHHHHHhhCCCCcEEEEEEe
Confidence 45667778888888888888776
No 195
>PF03464 eRF1_2: eRF1 domain 2; InterPro: IPR005141 This domain is found in the release factor eRF1 which terminates protein biosynthesis by recognizing stop codons at the A site of the ribosome and stimulating peptidyl-tRNA bond hydrolysis at the peptidyl transferase centre. The crystal structure of human eRF1 is known []. The overall shape and dimensions of eRF1 resemble a tRNA molecule with domains 1, 2, and 3 of eRF1 corresponding to the anticodon loop, aminoacyl acceptor stem, and T stem of a tRNA molecule, respectively. The position of the essential GGQ motif at an exposed tip of domain 2 suggests that the Gln residue coordinates a water molecule to mediate the hydrolytic activity at the peptidyl transferase centre. A conserved groove on domain 1, 80 A from the GGQ motif, is proposed to form the codon recognition site []. This domain is also found in other proteins which may also be involved in translation termination ; PDB: 3AGK_A 2VGN_A 2VGM_A 3J16_A 3IZQ 3IR9_A 3OBW_A 3MCA_B 2QI2_A 3E1Y_D ....
Probab=31.98 E-value=93 Score=24.23 Aligned_cols=42 Identities=14% Similarity=0.199 Sum_probs=28.7
Q ss_pred EEecCCCCCCCC--C----------HHHHHHHHHHHHHh--hcCCCceEEEEEeCC
Q 021410 2 AILNRPSALNAL--N----------TNMGAKLNKLFKAW--ENDPNIGFVSMKGSG 43 (312)
Q Consensus 2 itln~p~~~Nal--~----------~~~~~~L~~~l~~~--~~d~~v~~vvl~g~g 43 (312)
|+.+-|.|+..= + ...+.++.+.+.+. ...++++.|||.|.|
T Consensus 28 i~~~ip~K~~~Gg~s~~rf~r~~~~~~f~~~i~~~l~~~f~~~~~~~~~iIiaGPG 83 (133)
T PF03464_consen 28 IESNIPGKHKKGGQSQRRFEREKALEKFFKEIAEALKKYFLVNFDDVKCIIIAGPG 83 (133)
T ss_dssp EE-GHCCCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHCCCHTTTCSEEEEEEST
T ss_pred EEecCCCccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccEEEEECCH
Confidence 556667776542 2 35667777777776 556779999999975
No 196
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=31.93 E-value=1.3e+02 Score=27.15 Aligned_cols=23 Identities=26% Similarity=0.531 Sum_probs=16.8
Q ss_pred HHHHHHHHhhcCCCceEEEEEeC
Q 021410 20 KLNKLFKAWENDPNIGFVSMKGS 42 (312)
Q Consensus 20 ~L~~~l~~~~~d~~v~~vvl~g~ 42 (312)
.+.+.++.+.+||+.++|++...
T Consensus 187 ~~~D~l~~l~~Dp~T~~I~lylE 209 (291)
T PRK05678 187 NFIDVLEAFEEDPETEAIVMIGE 209 (291)
T ss_pred CHHHHHHHHhhCCCCcEEEEEEe
Confidence 35566777778888888888765
No 197
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=30.51 E-value=87 Score=29.62 Aligned_cols=37 Identities=22% Similarity=0.421 Sum_probs=24.1
Q ss_pred eeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHh
Q 021410 46 FCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLG 82 (312)
Q Consensus 46 F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 82 (312)
||.|+||..+......-..+..+.|...+...+..|+
T Consensus 90 yC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~ 126 (429)
T KOG0595|consen 90 YCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLH 126 (429)
T ss_pred eCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 7999999988765433345555666666555555444
No 198
>PRK08139 enoyl-CoA hydratase; Validated
Probab=30.34 E-value=1e+02 Score=27.27 Aligned_cols=89 Identities=11% Similarity=0.066 Sum_probs=53.2
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCC-cchhhhHHH
Q 021410 139 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRID 216 (312)
Q Consensus 139 r~~g~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 216 (312)
+.+... +.++.+--+.+..++..+. ..+.++.+ +..+|.++...|+.++...... .........
T Consensus 172 ~~~~a~eA~~~GLv~~vv~~~~l~~~-----------a~~~a~~l---a~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~ 237 (266)
T PRK08139 172 EFIDAATAREWGLVNRVVPADALDAA-----------VARLAAVI---AAKSPAAVRIGKEAFYRQAEMPLADAYAYAGD 237 (266)
T ss_pred CccCHHHHHHcCCccEeeChhHHHHH-----------HHHHHHHH---HhCCHHHHHHHHHHHHHhccCCHHHHHHHHHH
Confidence 444555 7777777777776554332 23345555 3457888999998887553322 222333344
Q ss_pred HHHhhcC-CCCHHHHHHHHHcccCCC
Q 021410 217 IVDKCFG-LDTVEEIIDSLESEASLI 241 (312)
Q Consensus 217 ~~~~~~~-~~~~~~~~~~l~~~~~~~ 241 (312)
.+..++. .+..+++.++++|+.+.+
T Consensus 238 ~~~~~~~~~d~~eg~~af~~kr~p~~ 263 (266)
T PRK08139 238 VMAENMMAEDAEEGIDAFLEKRPPEW 263 (266)
T ss_pred HHHHHhcCchHHHHHHHHhcCCCCCC
Confidence 5666775 555667777788875543
No 199
>PRK05674 gamma-carboxygeranoyl-CoA hydratase; Validated
Probab=30.02 E-value=98 Score=27.31 Aligned_cols=131 Identities=11% Similarity=0.077 Sum_probs=70.0
Q ss_pred ecccceeecCC-CeEEEeCceeEecCCCccc-ccC-CCchH-----HHhhhcChHH-HHHHHhcCCCCCHHHHHHcCccc
Q 021410 97 MGGGAGVSIPG-TFRVACGKTVFATPETLIG-FHP-DAGAS-----FYLSHLPGHL-GEFLALTGAKLNGAEMMACGLAT 167 (312)
Q Consensus 97 ~GgG~~lal~~-D~~ia~~~a~f~~pe~~~G-~~p-~~g~~-----~~l~r~~g~~-a~~l~ltg~~i~a~eA~~~Glv~ 167 (312)
+...+.+..++ |-+++.+.+++|++-.-.+ .+| -.|.. .+..+.+... |.++.+-.+.+..++..+.
T Consensus 119 lal~~D~~ia~~~a~f~~pe~~~Gi~p~~~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~---- 194 (265)
T PRK05674 119 LISCCDMAIGADDAQFCLSEVRIGLAPAVISPFVVKAIGERAARRYALTAERFDGRRARELGLLAESYPAAELEAQ---- 194 (265)
T ss_pred HhhhcCEEEEeCCCEEeCcccccCCCcchhHHHHHHHhCHHHHHHHHHhCcccCHHHHHHCCCcceecCHHHHHHH----
Confidence 33344444443 4567777777777532111 111 12211 1222344555 7787777777776654432
Q ss_pred eecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcch-hhh-HHHHHHhhcC-CCCHHHHHHHHHcccCCC
Q 021410 168 HYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNS-VIH-RIDIVDKCFG-LDTVEEIIDSLESEASLI 241 (312)
Q Consensus 168 ~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~-~~~~~~~~~~l~~~~~~~ 241 (312)
..+.+..+ +..+|.+++..|+.++......... ... ....+..++. .+..+++.++++|+.+.+
T Consensus 195 -------a~~~a~~l---a~~~p~a~~~~K~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~e~~~af~~kr~p~~ 261 (265)
T PRK05674 195 -------VEAWIANL---LLNSPQALRASKDLLREVGDGELSPALRRYCENAIARIRVSAEGQEGLRAFLEKRTPAW 261 (265)
T ss_pred -------HHHHHHHH---HhcCHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhcCHHHHHHHHHHHccCCCCC
Confidence 23345554 4458889998888877654332222 222 2244566665 455677777788875543
No 200
>PRK05862 enoyl-CoA hydratase; Provisional
Probab=29.78 E-value=91 Score=27.31 Aligned_cols=88 Identities=8% Similarity=0.068 Sum_probs=52.0
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCC-cchhhhHHH
Q 021410 139 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRID 216 (312)
Q Consensus 139 r~~g~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 216 (312)
+.+... |.++.+--+.++.++..+. ....++.+ +..+|.++..+|+.++...... .........
T Consensus 163 ~~~~a~eA~~~Glv~~vv~~~~l~~~-----------a~~~a~~l---~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~ 228 (257)
T PRK05862 163 RMMDAAEAERAGLVSRVVPADKLLDE-----------ALAAATTI---ASFSLPAVMMAKEAVNRAYETTLAEGLLFERR 228 (257)
T ss_pred CccCHHHHHHcCCCCEeeCHhHHHHH-----------HHHHHHHH---HhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 344555 7777777777776654421 22345544 3457888888888876543222 222333445
Q ss_pred HHHhhcC-CCCHHHHHHHHHcccCC
Q 021410 217 IVDKCFG-LDTVEEIIDSLESEASL 240 (312)
Q Consensus 217 ~~~~~~~-~~~~~~~~~~l~~~~~~ 240 (312)
.+..++. .+..+.+.++++|+.+.
T Consensus 229 ~~~~~~~s~~~~e~i~af~~kr~p~ 253 (257)
T PRK05862 229 LFHSLFATEDQKEGMAAFVEKRKPV 253 (257)
T ss_pred HHHHHhcChhHHHHHHHHhccCCCC
Confidence 5667775 45556676678877554
No 201
>PRK07327 enoyl-CoA hydratase; Provisional
Probab=29.40 E-value=1.1e+02 Score=26.95 Aligned_cols=131 Identities=15% Similarity=0.107 Sum_probs=64.5
Q ss_pred ecccceeecCC-CeEEEeCceeEecCCCccc--ccCC-Cch--H---HHhhhcChHH-HHHHHhcCCCCCHHHHHHcCcc
Q 021410 97 MGGGAGVSIPG-TFRVACGKTVFATPETLIG--FHPD-AGA--S---FYLSHLPGHL-GEFLALTGAKLNGAEMMACGLA 166 (312)
Q Consensus 97 ~GgG~~lal~~-D~~ia~~~a~f~~pe~~~G--~~p~-~g~--~---~~l~r~~g~~-a~~l~ltg~~i~a~eA~~~Glv 166 (312)
+...|.+..++ |-++..+.+++|++-..-| .+|. .|. + .+..+.+... |.++.+--+.++.++..+.
T Consensus 124 lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~--- 200 (268)
T PRK07327 124 AALLADISIAAKDARIIDGHTRLGVAAGDHAAIVWPLLCGMAKAKYYLLLCEPVSGEEAERIGLVSLAVDDDELLPK--- 200 (268)
T ss_pred HHHhCCEEEecCCCEEeCcccccCCCCCcchhhHHHHHhCHHHHHHHHHcCCccCHHHHHHcCCcceecCHHHHHHH---
Confidence 33444444433 3556666677777533222 1222 111 1 1222334444 7777676677766654432
Q ss_pred ceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcC-CCCHHHHHHHHHcccCCC
Q 021410 167 THYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFG-LDTVEEIIDSLESEASLI 241 (312)
Q Consensus 167 ~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~ 241 (312)
..+.++.+ +..+|.+++..|+.++...................++. .+..+.+.++++|+.+.+
T Consensus 201 --------a~~~a~~l---a~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~eg~~af~ekr~p~~ 265 (268)
T PRK07327 201 --------ALEVAERL---AAGSQTAIRWTKYALNNWLRMAGPTFDTSLALEFMGFSGPDVREGLASLREKRAPDF 265 (268)
T ss_pred --------HHHHHHHH---HcCCHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHccChhHHHHHHHHHhcCCCCC
Confidence 23345544 45578888888887764321111112222222223554 455667777788876554
No 202
>PRK07799 enoyl-CoA hydratase; Provisional
Probab=28.69 E-value=1.1e+02 Score=26.80 Aligned_cols=130 Identities=11% Similarity=0.027 Sum_probs=70.2
Q ss_pred ecccceeecCC-CeEEEeCceeEecCCCcccc--cCC-Cch-----HHHhhhcChHH-HHHHHhcCCCCCHHHHHHcCcc
Q 021410 97 MGGGAGVSIPG-TFRVACGKTVFATPETLIGF--HPD-AGA-----SFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLA 166 (312)
Q Consensus 97 ~GgG~~lal~~-D~~ia~~~a~f~~pe~~~G~--~p~-~g~-----~~~l~r~~g~~-a~~l~ltg~~i~a~eA~~~Glv 166 (312)
+...|.+..++ +-+++.+.+.+|++-.--|. +|. .|. ..+..+.+... |.++.+--+.++.++..+
T Consensus 118 lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~---- 193 (263)
T PRK07799 118 ILQGTDIRVAGESAKFGISEAKWSLFPMGGSAVRLVRQIPYTVACDLLLTGRHITAAEAKEIGLIGHVVPDGQALD---- 193 (263)
T ss_pred HHHhCCEEEecCCCEecCcccccCcCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccEecCcchHHH----
Confidence 33344444333 55677777788774322111 221 221 12233445555 788877777777655332
Q ss_pred ceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCC-cchhhhHHHHHHhhcC-CCCHHHHHHHHHcccCC
Q 021410 167 THYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRIDIVDKCFG-LDTVEEIIDSLESEASL 240 (312)
Q Consensus 167 ~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~ 240 (312)
+ ....++.+ ...+|.++..+|+.++...... ..........+..++. .+..+.+-++++++.+.
T Consensus 194 -~------a~~~a~~~---~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~~~~~~egi~af~~~r~p~ 259 (263)
T PRK07799 194 -K------ALELAELI---NANGPLAVQAILRTIRETEGMHENEAFKIDTKIGIPVFLSEDAKEGPRAFAEKRAPN 259 (263)
T ss_pred -H------HHHHHHHH---HhcChHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCccHHHHHHHHHccCCCC
Confidence 1 12334444 5568888998888887543322 2223334455667776 45556666678877554
No 203
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=28.62 E-value=25 Score=30.38 Aligned_cols=87 Identities=15% Similarity=0.175 Sum_probs=52.3
Q ss_pred CCCcEEEEEccceecccceeecCCCeE-----EEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCC--
Q 021410 84 HLKPHVAILNGVTMGGGAGVSIPGTFR-----VACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLN-- 156 (312)
Q Consensus 84 ~~kp~Iaav~G~a~GgG~~lal~~D~~-----ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~-- 156 (312)
++|--| .+-|..+||...+.++++.+ +.-|++..+.|+..+-++-+.++.+ ++++.-.. ...+=+.|.
T Consensus 146 ~dktki-vlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v~p~~~k~-i~~lc~kn---~~~S~~ki~~~ 220 (300)
T KOG4391|consen 146 LDKTKI-VLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLVFPFPMKY-IPLLCYKN---KWLSYRKIGQC 220 (300)
T ss_pred CCcceE-EEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhheeccchhhH-HHHHHHHh---hhcchhhhccc
Confidence 444433 36799999999999999875 4568899999998877654443322 33332221 111112222
Q ss_pred -HHHHHHcCccceecCCCCh
Q 021410 157 -GAEMMACGLATHYSVSEKL 175 (312)
Q Consensus 157 -a~eA~~~Glv~~vv~~~~l 175 (312)
-.-..-.||-|++||+-..
T Consensus 221 ~~P~LFiSGlkDelVPP~~M 240 (300)
T KOG4391|consen 221 RMPFLFISGLKDELVPPVMM 240 (300)
T ss_pred cCceEEeecCccccCCcHHH
Confidence 0112236889999998654
No 204
>smart00463 SMR Small MutS-related domain.
Probab=28.29 E-value=1.3e+02 Score=20.93 Aligned_cols=31 Identities=16% Similarity=0.194 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHhhcCCC-ceEEEEEeCCCc
Q 021410 15 TNMGAKLNKLFKAWENDPN-IGFVSMKGSGRA 45 (312)
Q Consensus 15 ~~~~~~L~~~l~~~~~d~~-v~~vvl~g~g~~ 45 (312)
.+.+..|.+.++.+..... -.+.||+|.|.+
T Consensus 12 ~eA~~~l~~~l~~~~~~~~~~~~~II~G~G~~ 43 (80)
T smart00463 12 EEALTALDKFLNNARLKGLEQKLVIITGKGKH 43 (80)
T ss_pred HHHHHHHHHHHHHHHHcCCCceEEEEEcccCC
Confidence 4677888888888887765 579999999854
No 205
>PLN02664 enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase
Probab=28.02 E-value=1e+02 Score=27.39 Aligned_cols=118 Identities=11% Similarity=0.051 Sum_probs=64.0
Q ss_pred CeEEEeCceeEecCCCccc---ccCC-Cch-----HHHhhhcChHH-HHHHHhcCCCCCH-HHHHHcCccceecCCCChh
Q 021410 108 TFRVACGKTVFATPETLIG---FHPD-AGA-----SFYLSHLPGHL-GEFLALTGAKLNG-AEMMACGLATHYSVSEKLP 176 (312)
Q Consensus 108 D~~ia~~~a~f~~pe~~~G---~~p~-~g~-----~~~l~r~~g~~-a~~l~ltg~~i~a-~eA~~~Glv~~vv~~~~l~ 176 (312)
|-+++.+.+++|++-. .| .+|. .|. ..+..+.+... |.++.+-.+.++. ++.. +...
T Consensus 141 ~a~f~~pe~~~Gl~p~-~g~~~~l~~~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~~l~-----------~~~~ 208 (275)
T PLN02664 141 DAFFSVKEVDLAITAD-LGTLQRLPSIVGYGNAMELALTGRRFSGSEAKELGLVSRVFGSKEDLD-----------EGVR 208 (275)
T ss_pred CCEeccHHHhhCCCCC-ccHHHHHHHHhCHHHHHHHHHhCCCCCHHHHHHcCCCceeeCChhHHH-----------HHHH
Confidence 3556666667776432 22 1222 121 12233445555 7888777777763 4322 1233
Q ss_pred HHHHHHhhhhcCCHHHHHHHHHHhccccCCCc-chhhhHHHHHHhhcC-CCCHHHHHHHHHcccCC
Q 021410 177 LIEEELGKLVTDDPSVIEACLEKYSDLVYPDK-NSVIHRIDIVDKCFG-LDTVEEIIDSLESEASL 240 (312)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~ 240 (312)
..++.+ +..+|.+++..|+.++....... ............++. .+..+++.++++|+.+.
T Consensus 209 ~~a~~i---a~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~d~~eg~~af~ekr~p~ 271 (275)
T PLN02664 209 LIAEGI---AAKSPLAVTGTKAVLLRSRELSVEQGLDYVATWNSAMLVSDDLNEAVSAQIQKRKPV 271 (275)
T ss_pred HHHHHH---HhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccChhHHHHHHHHhccCCCC
Confidence 445544 45688899988888765432222 222223344556665 55567777778887554
No 206
>PRK05995 enoyl-CoA hydratase; Provisional
Probab=27.86 E-value=1.1e+02 Score=26.92 Aligned_cols=89 Identities=12% Similarity=0.050 Sum_probs=52.9
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCC-cch-hhhHH
Q 021410 139 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNS-VIHRI 215 (312)
Q Consensus 139 r~~g~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~ 215 (312)
+.+... |.++.+-.+.++.++... +..+.++.++ ..+|.++...|+.++...... ... .....
T Consensus 167 ~~~~a~eA~~~Glv~~vv~~~~l~~-----------~a~~~a~~la---~~~~~a~~~~K~~l~~~~~~~~~~~~~~~e~ 232 (262)
T PRK05995 167 ERFDAAEALRLGLVHEVVPAEALDA-----------KVDELLAALV---ANSPQAVRAGKRLVRDVAGRPIDAALIADTA 232 (262)
T ss_pred CccCHHHHHHcCCCCeecCHHHHHH-----------HHHHHHHHHH---hCCHHHHHHHHHHHHhhhcCChhhHHHHHHH
Confidence 445555 777777777777666543 2334556553 467888888888876542222 222 22233
Q ss_pred HHHHhhcC-CCCHHHHHHHHHcccCCC
Q 021410 216 DIVDKCFG-LDTVEEIIDSLESEASLI 241 (312)
Q Consensus 216 ~~~~~~~~-~~~~~~~~~~l~~~~~~~ 241 (312)
..+..++. .+..+.+.++++|+.+.+
T Consensus 233 ~~~~~~~~~~d~~e~~~af~~kr~p~~ 259 (262)
T PRK05995 233 SRIALIRATEEAREGVAAFLEKRKPAW 259 (262)
T ss_pred HHHHHHhcCHHHHHHHHHHhcCCCCCC
Confidence 45566665 455677777788876543
No 207
>PRK05809 3-hydroxybutyryl-CoA dehydratase; Validated
Probab=27.59 E-value=94 Score=27.25 Aligned_cols=120 Identities=12% Similarity=0.199 Sum_probs=66.8
Q ss_pred CeEEEeCceeEecCCCcccc--cCC-Cc--hHH---HhhhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHH
Q 021410 108 TFRVACGKTVFATPETLIGF--HPD-AG--ASF---YLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLI 178 (312)
Q Consensus 108 D~~ia~~~a~f~~pe~~~G~--~p~-~g--~~~---~l~r~~g~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~ 178 (312)
+-+++.+...+|++-.-.|. +|. .| .+. +..+.+... +.++.+--+.++.++..+ ...+.
T Consensus 127 ~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~-----------~a~~~ 195 (260)
T PRK05809 127 KAKFGQPEVGLGITPGFGGTQRLARIVGPGKAKELIYTGDMINAEEALRIGLVNKVVEPEKLME-----------EAKAL 195 (260)
T ss_pred CCEEeCcccccCCCCCccHHHHHHHHhCHHHHHHHHHhCCCCCHHHHHHcCCCCcccChHHHHH-----------HHHHH
Confidence 34566677777774321111 221 12 111 222334444 777777778777766442 33445
Q ss_pred HHHHhhhhcCCHHHHHHHHHHhccccCCC-cchhhhHHHHHHhhcCC-CCHHHHHHHHHcccCCC
Q 021410 179 EEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRIDIVDKCFGL-DTVEEIIDSLESEASLI 241 (312)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~ 241 (312)
++.+ +..+|.++...|+.++...... ..........+..++.. +..+.+.++++|+.+.+
T Consensus 196 a~~l---a~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~egi~af~~~r~p~~ 257 (260)
T PRK05809 196 ANKI---AANAPIAVKLCKDAINRGMQVDIDTAVAIEAEDFGECFSTEDQTEGMTAFVEKREKNF 257 (260)
T ss_pred HHHH---HhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCCCCC
Confidence 5555 4567889999998887543322 22233344566777764 55566767788875543
No 208
>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain. Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.
Probab=27.55 E-value=1.8e+02 Score=27.93 Aligned_cols=54 Identities=19% Similarity=0.285 Sum_probs=35.3
Q ss_pred HHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEcccee
Q 021410 19 AKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTM 97 (312)
Q Consensus 19 ~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~ 97 (312)
-.+.+.++.+..||++++|++...+ ++ +. .+|. +..++... .||||+..-|..-
T Consensus 189 ~~~~d~l~~l~~D~~t~~I~ly~E~--------~~---------~~---~~f~----~aa~~a~~-~KPVv~~k~Grs~ 242 (447)
T TIGR02717 189 IDESDLLEYLADDPDTKVILLYLEG--------IK---------DG---RKFL----KTAREISK-KKPIVVLKSGTSE 242 (447)
T ss_pred CCHHHHHHHHhhCCCCCEEEEEecC--------CC---------CH---HHHH----HHHHHHcC-CCCEEEEecCCCh
Confidence 3566788888888999999888763 10 11 1222 23333434 8999999998864
No 209
>PLN02888 enoyl-CoA hydratase
Probab=27.43 E-value=1.1e+02 Score=26.96 Aligned_cols=135 Identities=7% Similarity=0.034 Sum_probs=72.0
Q ss_pred ceecccceeecCC-CeEEEeCceeEecCCCccc--ccCC-Cch-----HHHhhhcChHH-HHHHHhcCCCCCHHHHHHcC
Q 021410 95 VTMGGGAGVSIPG-TFRVACGKTVFATPETLIG--FHPD-AGA-----SFYLSHLPGHL-GEFLALTGAKLNGAEMMACG 164 (312)
Q Consensus 95 ~a~GgG~~lal~~-D~~ia~~~a~f~~pe~~~G--~~p~-~g~-----~~~l~r~~g~~-a~~l~ltg~~i~a~eA~~~G 164 (312)
..+...|.+..++ |-++..+..++|++-.--| .+|. .|. ..+..+.+... |.++.+--+.++.++..+.
T Consensus 115 ~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~- 193 (265)
T PLN02888 115 FEIALACDILVASRGAKFIDTHAKFGIFPSWGLSQKLSRIIGANRAREVSLTAMPLTAETAERWGLVNHVVEESELLKK- 193 (265)
T ss_pred HHHHHhCCEEEecCCCEecCccccccCCCCccHhhHHHHHhCHHHHHHHHHhCCccCHHHHHHcCCccEeeChHHHHHH-
Confidence 3334444444444 4455666677776532111 1222 121 11233455555 7888777777776554321
Q ss_pred ccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCc-chhhhHHHHHHhhc---CCCCHHHHHHHHHcccCC
Q 021410 165 LATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDK-NSVIHRIDIVDKCF---GLDTVEEIIDSLESEASL 240 (312)
Q Consensus 165 lv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~ 240 (312)
..+.++.+ +..+|.+++..|+.++....... ............++ +.+..+.+.++++|+.++
T Consensus 194 ----------a~~~a~~l---a~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~d~~e~~~af~ekr~~~ 260 (265)
T PLN02888 194 ----------AREVAEAI---IKNNQGMVLRYKSVINDGLKLDLGHALQLEKERAHDYYNGMTKEQFQKMQEFIAGRSSK 260 (265)
T ss_pred ----------HHHHHHHH---HhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHhcCCCC
Confidence 23344444 56678888888888865433222 22222334445553 456667777888888665
Q ss_pred CCc
Q 021410 241 IND 243 (312)
Q Consensus 241 ~~~ 243 (312)
..+
T Consensus 261 ~~~ 263 (265)
T PLN02888 261 KPS 263 (265)
T ss_pred CCC
Confidence 443
No 210
>PRK13505 formate--tetrahydrofolate ligase; Provisional
Probab=27.37 E-value=1.3e+02 Score=29.82 Aligned_cols=70 Identities=17% Similarity=0.134 Sum_probs=42.2
Q ss_pred CCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEccceecccceee
Q 021410 31 DPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVS 104 (312)
Q Consensus 31 d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~la 104 (312)
.|++-|+|-|-..=-+-.|.+...+. ..+.+....-+..+.+.+..+.++.+|+|.+||-+..---.++.
T Consensus 322 ~P~~~VlVaTvraLK~hgg~~~~~l~----~en~Eal~sGl~NL~RHIenvr~FGvPvVVAINKFd~DTe~Ei~ 391 (557)
T PRK13505 322 KPDAVVIVATVRALKMHGGVAKDDLK----EENVEALKKGFANLERHIENIRKFGVPVVVAINKFVTDTDAEIA 391 (557)
T ss_pred CCCEEEEEeehHHHHHcCCCChhhcc----ccCHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCCCHHHHH
Confidence 45555555544432233455554432 23445555555666777788889999999999987665544443
No 211
>smart00870 Asparaginase Asparaginase, which is found in various plant, animal and bacterial cells, catalyses the deamination of asparagine to yield aspartic acid and an ammonium ion, resulting in a depletion of free circulatory asparagine in plasma PUBMED:3026924. The enzyme is effective in the treatment of human malignant lymphomas, which have a diminished capacity to produce asparagine synthetase: in order to survive, such cells absorb asparagine from blood plasma PUBMED:2407723, PUBMED:3379033 - if Asn levels have been depleted by injection of asparaginase, the lymphoma cells die.
Probab=27.27 E-value=2.5e+02 Score=25.69 Aligned_cols=30 Identities=17% Similarity=-0.010 Sum_probs=21.9
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCceEEEEEe
Q 021410 12 ALNTNMGAKLNKLFKAWENDPNIGFVSMKG 41 (312)
Q Consensus 12 al~~~~~~~L~~~l~~~~~d~~v~~vvl~g 41 (312)
-|+++.+.+|.+.+++.-+++++..+|||-
T Consensus 56 ~~t~~~w~~la~~i~~~~~~~~~dG~VVtH 85 (323)
T smart00870 56 NMTPADWLKLAKRINEALADDGYDGVVVTH 85 (323)
T ss_pred cCCHHHHHHHHHHHHHHhccCCCCEEEEec
Confidence 478999999999988765556666665543
No 212
>PRK09245 enoyl-CoA hydratase; Provisional
Probab=27.12 E-value=1e+02 Score=27.05 Aligned_cols=133 Identities=11% Similarity=0.081 Sum_probs=70.4
Q ss_pred cceecccceeecCC-CeEEEeCceeEecCCCccc--ccCC-CchH-----HHhhhcChHH-HHHHHhcCCCCCHHHHHHc
Q 021410 94 GVTMGGGAGVSIPG-TFRVACGKTVFATPETLIG--FHPD-AGAS-----FYLSHLPGHL-GEFLALTGAKLNGAEMMAC 163 (312)
Q Consensus 94 G~a~GgG~~lal~~-D~~ia~~~a~f~~pe~~~G--~~p~-~g~~-----~~l~r~~g~~-a~~l~ltg~~i~a~eA~~~ 163 (312)
|..+...|.+..++ |-++..+.+++|+.-.--| .+|. .|.. .+..+.+... |.++.+-.+.+..++..+
T Consensus 118 G~~lalacD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~- 196 (266)
T PRK09245 118 GCDLACMCDIRIASETARFAESFVKLGLIPGDGGAWLLPRIIGMARAAEMAFTGDAIDAATALEWGLVSRVVPADQLLP- 196 (266)
T ss_pred HHHHHHhCCEEEecCCCEEcccccccCcCCCcchhhhHHHHhhHHHHHHHHHcCCCcCHHHHHHcCCcceecCHHHHHH-
Confidence 33344445555444 4566667777777422212 1232 1221 1222344445 777777777777666443
Q ss_pred CccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCC-cchhhhHHHHHHhhcC-CCCHHHHHHHHHcccCC
Q 021410 164 GLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRIDIVDKCFG-LDTVEEIIDSLESEASL 240 (312)
Q Consensus 164 Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~ 240 (312)
...+.++.+ +..+|.+++..|+.++...... ........+.+..++. .+..+++.++++|+.+.
T Consensus 197 ----------~a~~~a~~l---~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~d~~eg~~af~~kr~p~ 262 (266)
T PRK09245 197 ----------AARALAERI---AANPPHALRLTKRLLREGQHASLDTLLELSAAYQALAHHTADHREAVDAFLEKRPPV 262 (266)
T ss_pred ----------HHHHHHHHH---HhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCHhHHHHHHHHHcCCCCC
Confidence 123345544 3567888888888876543222 1222223345566665 45556666678887554
No 213
>PRK14053 methyltransferase; Provisional
Probab=27.07 E-value=90 Score=26.03 Aligned_cols=37 Identities=22% Similarity=0.384 Sum_probs=28.9
Q ss_pred HHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHH
Q 021410 21 LNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYH 57 (312)
Q Consensus 21 L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~ 57 (312)
+...+..+-.||++|.+||.|.. +..-+|.-|..+.+
T Consensus 52 IEKvI~NvisNpNIRflilcG~Ev~GHltGqsL~aL~~ 89 (194)
T PRK14053 52 VEKIIVNVISNSNIRYVLLCGGESRGHLAGHSLLAIHA 89 (194)
T ss_pred HHHHHHHhhcCCCceEEEEecCccCCccccHHHHHHHH
Confidence 55667777889999999999986 66777777776653
No 214
>PRK08252 enoyl-CoA hydratase; Provisional
Probab=27.00 E-value=1.2e+02 Score=26.47 Aligned_cols=119 Identities=11% Similarity=0.049 Sum_probs=65.7
Q ss_pred CeEEEeCceeEecCCCcccc--cCC-Cc---hH--HHhhhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHH
Q 021410 108 TFRVACGKTVFATPETLIGF--HPD-AG---AS--FYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLI 178 (312)
Q Consensus 108 D~~ia~~~a~f~~pe~~~G~--~p~-~g---~~--~~l~r~~g~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~ 178 (312)
+-+++.+..++|+.-...|. +|. .| +. .+..+.++.. |.++.+--+.++.++..+ +..+.
T Consensus 121 ~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~-----------~a~~~ 189 (254)
T PRK08252 121 DAKFGLPEVKRGLVAAGGGLLRLPRRIPYHIAMELALTGDMLTAERAHELGLVNRLTEPGQALD-----------AALEL 189 (254)
T ss_pred CCEEeCchhhcCCCCCchHHHHHHHHcCHHHHHHHHHcCCccCHHHHHHcCCcceecCcchHHH-----------HHHHH
Confidence 34566677777774332221 121 11 11 1223345555 778777777777666444 23345
Q ss_pred HHHHhhhhcCCHHHHHHHHHHhccccCCCc-chhhhHHHHHHhhcC-CCCHHHHHHHHHcccCC
Q 021410 179 EEELGKLVTDDPSVIEACLEKYSDLVYPDK-NSVIHRIDIVDKCFG-LDTVEEIIDSLESEASL 240 (312)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~ 240 (312)
++.+ +..+|.++..+|+.++....... .........+..++. .+..+++.++++|+.+.
T Consensus 190 a~~l---~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~~~~~~eg~~af~~kr~p~ 250 (254)
T PRK08252 190 AERI---AANGPLAVAASKRIVVESGDWSEDEMFARQRELIAPVFTSADAKEGATAFAEKRAPV 250 (254)
T ss_pred HHHH---HhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCchHHHHHHHHhcCCCCC
Confidence 5555 45688899999988875433222 222233445666665 55556666778877554
No 215
>PRK07657 enoyl-CoA hydratase; Provisional
Probab=26.97 E-value=1.1e+02 Score=26.95 Aligned_cols=88 Identities=13% Similarity=0.100 Sum_probs=54.4
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCC-cchhhhHHH
Q 021410 139 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRID 216 (312)
Q Consensus 139 r~~g~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 216 (312)
+.+... +.++.+--+.++.++..+ .....++.+ +..+|.++..+|+.++...... .........
T Consensus 166 ~~~~a~eA~~~Glv~~vv~~~~l~~-----------~a~~~a~~l---~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~ 231 (260)
T PRK07657 166 RRISAQEAKEIGLVEFVVPAHLLEE-----------KAIEIAEKI---ASNGPIAVRQAKEAISNGIQVDLHTGLQIEKQ 231 (260)
T ss_pred CCCCHHHHHHcCCCCeecCHHHHHH-----------HHHHHHHHH---HhCCHHHHHHHHHHHHHhccCCHHHHHHHHHH
Confidence 445555 777777777777766543 234455655 4568888999998887543322 222333445
Q ss_pred HHHhhcC-CCCHHHHHHHHHcccCC
Q 021410 217 IVDKCFG-LDTVEEIIDSLESEASL 240 (312)
Q Consensus 217 ~~~~~~~-~~~~~~~~~~l~~~~~~ 240 (312)
.+..++. .+..+.+.++++++.+.
T Consensus 232 ~~~~~~~~~~~~e~~~af~~~r~~~ 256 (260)
T PRK07657 232 AYEGTIPTKDRLEGLQAFKEKRKPM 256 (260)
T ss_pred HHHHHhcCHhHHHHHHHHhcCCCCC
Confidence 5667775 45556666678887554
No 216
>PRK11423 methylmalonyl-CoA decarboxylase; Provisional
Probab=26.69 E-value=1.4e+02 Score=26.21 Aligned_cols=119 Identities=15% Similarity=0.129 Sum_probs=64.4
Q ss_pred CeEEEeCceeEecCCCcccc--cCC-Cc--hH---HHhhhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHH
Q 021410 108 TFRVACGKTVFATPETLIGF--HPD-AG--AS---FYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLI 178 (312)
Q Consensus 108 D~~ia~~~a~f~~pe~~~G~--~p~-~g--~~---~~l~r~~g~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~ 178 (312)
+-+++-+.+++|++-..-|. +|. .| -+ .+..+.+... +.++.+--+.++.++... ...+.
T Consensus 126 ~a~f~~pe~~~Gl~~~~g~~~~l~~~vg~~~a~~l~l~g~~~~a~eA~~~GLv~~vv~~~~l~~-----------~a~~~ 194 (261)
T PRK11423 126 TSTFAMTPANLGVPYNLSGILNFTNDAGFHIVKEMFFTASPITAQRALAVGILNHVVEVEELED-----------FTLQM 194 (261)
T ss_pred CCEecCchhhcCCCCCccHHHHHHHHhHHHHHHHHHHcCCCcCHHHHHHcCCcCcccCHHHHHH-----------HHHHH
Confidence 34566667777776433232 221 11 11 1223344445 777777777777665432 12233
Q ss_pred HHHHhhhhcCCHHHHHHHHHHhccccC--CC-cchhhhHHHHHHhhcC-CCCHHHHHHHHHcccCC
Q 021410 179 EEELGKLVTDDPSVIEACLEKYSDLVY--PD-KNSVIHRIDIVDKCFG-LDTVEEIIDSLESEASL 240 (312)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~ 240 (312)
++.+ +..+|.+++..|+.++.... .. .............+++ .+..+++.++++|+.+.
T Consensus 195 a~~l---~~~~~~a~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~eg~~af~~kr~p~ 257 (261)
T PRK11423 195 AHHI---SEKAPLAIAVIKEQLRVLGEAHPMNPDEFERIQGLRRAVYDSEDYQEGMNAFLEKRKPV 257 (261)
T ss_pred HHHH---HhcCHHHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHhCChhHHHHHHHHhccCCCC
Confidence 4443 45578888888888764322 11 1222233345567775 55667777778887554
No 217
>PF09905 DUF2132: Uncharacterized conserved protein (DUF2132); InterPro: IPR018668 This entry contains proteins that have no known function. ; PDB: 2JVW_A.
Probab=26.39 E-value=96 Score=20.98 Aligned_cols=29 Identities=21% Similarity=0.513 Sum_probs=21.8
Q ss_pred HhhcC-CCCHHHHHHHHHcccCCCCchHHHHHHHHH
Q 021410 219 DKCFG-LDTVEEIIDSLESEASLINDPWCGSTLRLL 253 (312)
Q Consensus 219 ~~~~~-~~~~~~~~~~l~~~~~~~~~~~a~~~~~~i 253 (312)
-+||. .+++..-+.+|.|. +||++-.+.+
T Consensus 33 i~CF~~~PsikSSLkFLRkT------pWAR~KVE~l 62 (64)
T PF09905_consen 33 INCFKNNPSIKSSLKFLRKT------PWAREKVENL 62 (64)
T ss_dssp SSSTTSS--HHHHHHHHHHS------HHHHHHHHHH
T ss_pred cccCCCCCchHHHHHHHhcC------HhHHHHHHHh
Confidence 47885 78999999999987 8998877654
No 218
>PRK08140 enoyl-CoA hydratase; Provisional
Probab=26.35 E-value=1.3e+02 Score=26.30 Aligned_cols=90 Identities=13% Similarity=0.044 Sum_probs=53.5
Q ss_pred hhhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCC-cchhhhH
Q 021410 137 LSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHR 214 (312)
Q Consensus 137 l~r~~g~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 214 (312)
..+.+... +.++.+--+.++.++... +..+.++.+ +..+|.++...|+.++...... .......
T Consensus 166 ~g~~~~a~eA~~~Glv~~vv~~~~l~~-----------~a~~~a~~i---a~~~~~a~~~~K~~l~~~~~~~~~~~~~~e 231 (262)
T PRK08140 166 LGEKLSAEQAEQWGLIWRVVDDAALAD-----------EAQQLAAHL---ATQPTRGLALIKQAMNASATNTLDAQLDLE 231 (262)
T ss_pred cCCCcCHHHHHHcCCccEeeChHHHHH-----------HHHHHHHHH---HhCCHHHHHHHHHHHHHhhhCCHHHHHHHH
Confidence 33455555 778777777777665432 234455655 3457888888888876543222 2223333
Q ss_pred HHHHHhhcC-CCCHHHHHHHHHcccCC
Q 021410 215 IDIVDKCFG-LDTVEEIIDSLESEASL 240 (312)
Q Consensus 215 ~~~~~~~~~-~~~~~~~~~~l~~~~~~ 240 (312)
...+..++. .+..+.+.++++|+.+.
T Consensus 232 ~~~~~~~~~~~~~~e~~~af~~kr~p~ 258 (262)
T PRK08140 232 RDLQREAGRSADYAEGVSAFLEKRAPR 258 (262)
T ss_pred HHHHHHHhcChhHHHHHHHHhcCCCCC
Confidence 445667775 45556677778887554
No 219
>PRK07658 enoyl-CoA hydratase; Provisional
Probab=26.23 E-value=1e+02 Score=26.89 Aligned_cols=89 Identities=13% Similarity=0.126 Sum_probs=54.2
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCC-cchhhhHHH
Q 021410 139 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRID 216 (312)
Q Consensus 139 r~~g~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 216 (312)
+.+... |.++.+--+.++.++..+ +..+.++.+ +..+|.++...|+.++...... .........
T Consensus 163 ~~~~a~eA~~~Glv~~vv~~~~l~~-----------~a~~~a~~l---~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~ 228 (257)
T PRK07658 163 EPITGAEALKWGLVNGVFPEETLLD-----------DAKKLAKKI---AGKSPATTRAVLELLQTTKSSSYYEGVKREAK 228 (257)
T ss_pred CCcCHHHHHHcCCcCeecChhHHHH-----------HHHHHHHHH---HhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 345555 777777777777666442 344556655 3467888888888876543222 222333455
Q ss_pred HHHhhcC-CCCHHHHHHHHHcccCCC
Q 021410 217 IVDKCFG-LDTVEEIIDSLESEASLI 241 (312)
Q Consensus 217 ~~~~~~~-~~~~~~~~~~l~~~~~~~ 241 (312)
.+..++. .+..+.+.++++|+.+.+
T Consensus 229 ~~~~~~~~~~~~egi~af~~kr~p~~ 254 (257)
T PRK07658 229 IFGEVFTSEDAKEGVQAFLEKRKPSF 254 (257)
T ss_pred HHHHHhCCHHHHHHHHHHHcCCCCCC
Confidence 6677775 455566777788875543
No 220
>PRK06495 enoyl-CoA hydratase; Provisional
Probab=25.45 E-value=1.2e+02 Score=26.66 Aligned_cols=89 Identities=16% Similarity=0.043 Sum_probs=54.0
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCc-chhhhHHH
Q 021410 139 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDK-NSVIHRID 216 (312)
Q Consensus 139 r~~g~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 216 (312)
+.+... |.++.+-.+.++.++..+ ...+.++.+ +..+|.++...|+.+........ ........
T Consensus 163 ~~~~a~eA~~~GLv~~vv~~~~~~~-----------~a~~~a~~l---~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~ 228 (257)
T PRK06495 163 YRVPAAELYRRGVIEACLPPEELMP-----------EAMEIAREI---ASKSPLATRLAKDALNTIENMSLRDGYRYEQD 228 (257)
T ss_pred CeeCHHHHHHcCCcceecCHHHHHH-----------HHHHHHHHH---HhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 455556 888888877777666542 344456655 45688888888888765432222 22223334
Q ss_pred HHHhhcC-CCCHHHHHHHHHcccCCC
Q 021410 217 IVDKCFG-LDTVEEIIDSLESEASLI 241 (312)
Q Consensus 217 ~~~~~~~-~~~~~~~~~~l~~~~~~~ 241 (312)
....++. .+..+++-++++|+.+.+
T Consensus 229 ~~~~~~~s~d~~egi~af~~kr~p~~ 254 (257)
T PRK06495 229 ITAKLAKTEDAKEAQRAFLEKRPPVF 254 (257)
T ss_pred HHHHHhcChHHHHHHHHHhccCCCCC
Confidence 5566665 455566666788876543
No 221
>PF06833 MdcE: Malonate decarboxylase gamma subunit (MdcE); InterPro: IPR009648 This family consists of several bacterial malonate decarboxylase gamma subunit proteins. Malonate decarboxylase of Klebsiella pneumoniae consists of four different subunits and catalyses the conversion of malonate plus H+ to acetate and CO2. The catalysis proceeds via acetyl and malonyl thioester residues with the phosphribosyl-dephospho-CoA prosthetic group of the acyl carrier protein (ACP) subunit. MdcD and E together probably function as malonyl-S-ACP decarboxylase []. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=25.40 E-value=4.6e+02 Score=22.89 Aligned_cols=97 Identities=13% Similarity=0.039 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHhhCCCcEEEEEccceecccc-eeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHH
Q 021410 70 FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGA-GVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFL 148 (312)
Q Consensus 70 ~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~-~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l 148 (312)
++....+.+.......-|||+.|-|.+++||| ...+.+|-.||-+ ++.+-..+-. ++.+..++.=..-.++
T Consensus 90 alAhla~a~a~AR~~GHpvI~Lv~G~A~SGaFLA~GlqA~rl~AL~-------ga~i~vM~~~-s~ARVTk~~ve~Le~l 161 (234)
T PF06833_consen 90 ALAHLAKAYALARLAGHPVIGLVYGKAMSGAFLAHGLQANRLIALP-------GAMIHVMGKP-SAARVTKRPVEELEEL 161 (234)
T ss_pred HHHHHHHHHHHHHHcCCCeEEEEecccccHHHHHHHHHhcchhcCC-------CCeeecCChH-HhHHHhhcCHHHHHHH
Confidence 34444455566667899999999999999986 4667788777655 4444333322 2233333321112333
Q ss_pred HhcCCC--CCHHHHHHcCccceecCCCC
Q 021410 149 ALTGAK--LNGAEMMACGLATHYSVSEK 174 (312)
Q Consensus 149 ~ltg~~--i~a~eA~~~Glv~~vv~~~~ 174 (312)
.-+--+ ++.+--.++|.++++++.+.
T Consensus 162 a~s~PvfA~gi~ny~~lG~l~~l~~~~~ 189 (234)
T PF06833_consen 162 AKSVPVFAPGIENYAKLGALDELWDGDL 189 (234)
T ss_pred hhcCCCcCCCHHHHHHhccHHHHhcccc
Confidence 333333 45566778999999988543
No 222
>PLN02874 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=25.17 E-value=1.5e+02 Score=27.77 Aligned_cols=78 Identities=4% Similarity=-0.158 Sum_probs=43.5
Q ss_pred hCCCcEEEEEccceecccceeecCC-CeEEEeCceeEecCC-Cccc-ccCCCchH---H--HhhhcChHH-HHHHHhcCC
Q 021410 83 THLKPHVAILNGVTMGGGAGVSIPG-TFRVACGKTVFATPE-TLIG-FHPDAGAS---F--YLSHLPGHL-GEFLALTGA 153 (312)
Q Consensus 83 ~~~kp~Iaav~G~a~GgG~~lal~~-D~~ia~~~a~f~~pe-~~~G-~~p~~g~~---~--~l~r~~g~~-a~~l~ltg~ 153 (312)
...=+.++. |..+...|.+..++ +-+++-+.+++|+.- .... ++|-.++. + +..+.++.. |.++.|--+
T Consensus 111 aV~G~a~Gg--G~~LalacD~ria~~~a~f~~pe~~iGl~p~~g~~~~L~rl~g~~a~~l~ltG~~i~a~eA~~~GLv~~ 188 (379)
T PLN02874 111 LVHGLVMGG--GAGLMVPMKFRVVTEKTVFATPEASVGFHTDCGFSYILSRLPGHLGEYLALTGARLNGKEMVACGLATH 188 (379)
T ss_pred EecCeEEec--HHHHHHhCCeEEEeCCeEEeccccccCcCCChhHHHHHHhhhHHHHHHHHHcCCcccHHHHHHcCCccE
Confidence 344555554 66666777776665 468888999999753 2211 12332221 1 222344444 777777667
Q ss_pred CCCHHHHHH
Q 021410 154 KLNGAEMMA 162 (312)
Q Consensus 154 ~i~a~eA~~ 162 (312)
.+..++...
T Consensus 189 vv~~~~l~~ 197 (379)
T PLN02874 189 FVPSEKLPE 197 (379)
T ss_pred EeCHHHHHH
Confidence 776665543
No 223
>KOG1255 consensus Succinyl-CoA synthetase, alpha subunit [Energy production and conversion]
Probab=25.09 E-value=2e+02 Score=25.24 Aligned_cols=56 Identities=27% Similarity=0.484 Sum_probs=34.9
Q ss_pred HHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEccce
Q 021410 20 KLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVT 96 (312)
Q Consensus 20 ~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a 96 (312)
.+.++|+.+-.||..+.||+-|. -|+.- .++..+|.... .-..-+||||+.|-|..
T Consensus 218 ~FID~L~vFl~D~~t~GIiliGE-----IGG~A-----------Ee~AA~flk~~-----nSg~~~kPVvsFIAG~t 273 (329)
T KOG1255|consen 218 NFIDCLEVFLEDPETEGIILIGE-----IGGSA-----------EEEAAEFLKEY-----NSGSTAKPVVSFIAGVT 273 (329)
T ss_pred cHHHHHHHHhcCcccceEEEEec-----cCChh-----------hHHHHHHHHHh-----ccCCCCCceeEEeeccc
Confidence 35677777888999999999986 22211 22233333321 12246899999998764
No 224
>PRK09674 enoyl-CoA hydratase-isomerase; Provisional
Probab=24.81 E-value=1.2e+02 Score=26.41 Aligned_cols=133 Identities=11% Similarity=0.072 Sum_probs=72.6
Q ss_pred cceecccceeecCC-CeEEEeCceeEecCCCcccc--cCC-Cch---H--HHhhhcChHH-HHHHHhcCCCCCHHHHHHc
Q 021410 94 GVTMGGGAGVSIPG-TFRVACGKTVFATPETLIGF--HPD-AGA---S--FYLSHLPGHL-GEFLALTGAKLNGAEMMAC 163 (312)
Q Consensus 94 G~a~GgG~~lal~~-D~~ia~~~a~f~~pe~~~G~--~p~-~g~---~--~~l~r~~g~~-a~~l~ltg~~i~a~eA~~~ 163 (312)
|..+...|.+..++ |-+++.+.+++|+.-.--|. +|. .|. . .+..+.+... +.++.+--+.++.++..+
T Consensus 107 G~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ig~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~~~~- 185 (255)
T PRK09674 107 GCELALLCDIVIAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSLASQMVLTGESITAQQAQQAGLVSEVFPPELTLE- 185 (255)
T ss_pred HHHHHHhCCEEEecCCCEEeCchhhcCCCCCccHHHHHHHHhCHHHHHHHHHcCCccCHHHHHHcCCCcEecChHHHHH-
Confidence 44444445544444 45677777788873221111 221 111 1 1223344545 777777767776665432
Q ss_pred CccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCC-cchhhhHHHHHHhhcCCC-CHHHHHHHHHcccCC
Q 021410 164 GLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRIDIVDKCFGLD-TVEEIIDSLESEASL 240 (312)
Q Consensus 164 Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~ 240 (312)
.....++.+ +..+|.++...|+.++...... ..........+..++..+ ..+.+-++++|+.+.
T Consensus 186 ----------~a~~~a~~l---~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~e~i~af~~kr~p~ 251 (255)
T PRK09674 186 ----------RALQLASKI---ARHSPLALRAAKQALRQSQEVDLQAGLAQERQLFTLLAATEDRHEGISAFLEKRTPD 251 (255)
T ss_pred ----------HHHHHHHHH---HhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhccCCCC
Confidence 344556655 4568899999999887543332 222333445666777654 456666667777554
No 225
>PRK06210 enoyl-CoA hydratase; Provisional
Probab=24.42 E-value=1.4e+02 Score=26.33 Aligned_cols=88 Identities=13% Similarity=0.103 Sum_probs=51.5
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhc-CCHHHHHHHHHHhccccCCC-cchhhhHH
Q 021410 139 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVT-DDPSVIEACLEKYSDLVYPD-KNSVIHRI 215 (312)
Q Consensus 139 r~~g~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 215 (312)
+.+... |.++.+--+.++.++..+ +..+.+..+ +. .+|.++...|+.++...... ........
T Consensus 177 ~~~~a~eA~~~Glv~~vv~~~~l~~-----------~a~~~a~~i---~~~~~p~a~~~~K~~l~~~~~~~l~~~~~~e~ 242 (272)
T PRK06210 177 RTFYAEEALRLGLVNRVVPPDELME-----------RTLAYAEDL---ARNVSPASMAVIKRQLYEDAFQTLAEATARAN 242 (272)
T ss_pred CccCHHHHHHcCCcceecCHHHHHH-----------HHHHHHHHH---HhcCCHHHHHHHHHHHHhcccCCHHHHHHHHH
Confidence 444555 777777777777665433 122344544 33 37888888888887553322 22223334
Q ss_pred HHHHhhcC-CCCHHHHHHHHHcccCC
Q 021410 216 DIVDKCFG-LDTVEEIIDSLESEASL 240 (312)
Q Consensus 216 ~~~~~~~~-~~~~~~~~~~l~~~~~~ 240 (312)
..+..++. .+..+++.++++|+.+.
T Consensus 243 ~~~~~~~~~~~~~egi~af~~kr~p~ 268 (272)
T PRK06210 243 REMHESLQRPDFIEGVASFLEKRPPR 268 (272)
T ss_pred HHHHHHhcCccHHHHHHHHhccCCCC
Confidence 45666665 55566676778887544
No 226
>PRK00964 tetrahydromethanopterin S-methyltransferase subunit A; Provisional
Probab=24.09 E-value=1e+02 Score=26.50 Aligned_cols=36 Identities=25% Similarity=0.443 Sum_probs=26.6
Q ss_pred HHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHH
Q 021410 21 LNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLY 56 (312)
Q Consensus 21 L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~ 56 (312)
+...+..+-.||++|.+||.|.. +..-+|--|..+.
T Consensus 59 IEKvI~NvisNpNIRflilcG~Ev~GH~tGqsl~aL~ 95 (225)
T PRK00964 59 IEKVIANVISNPNIRFLILCGSEVQGHITGQSLKALH 95 (225)
T ss_pred HHHHHHHHhcCCCceEEEEecCccCCccccHHHHHHH
Confidence 56677778889999999999986 5555665555443
No 227
>PF12268 DUF3612: Protein of unknown function (DUF3612); InterPro: IPR022055 This domain family is found in bacteria, and is approximately 180 amino acids in length. The family is found in association with PF01381 from PFAM.
Probab=23.83 E-value=89 Score=25.06 Aligned_cols=24 Identities=25% Similarity=0.494 Sum_probs=19.1
Q ss_pred CceEEEEEeCCCceeccCCchhHH
Q 021410 33 NIGFVSMKGSGRAFCAGGDIVSLY 56 (312)
Q Consensus 33 ~v~~vvl~g~g~~F~aG~Dl~~~~ 56 (312)
++++.=+.|...+.|+|.||+--.
T Consensus 79 Si~v~D~Agn~hVLCaGIDLNPAi 102 (178)
T PF12268_consen 79 SIKVKDLAGNNHVLCAGIDLNPAI 102 (178)
T ss_pred ccccccCCCCceeEEecccCCHhH
Confidence 467777788889999999998543
No 228
>PF04208 MtrA: Tetrahydromethanopterin S-methyltransferase, subunit A ; InterPro: IPR013340 This domain is mostly found in N5-methyltetrahydromethanopterin: coenzyme M methyltransferase subunit A (MtrA) in methanogenic archaea. This methyltranferase is a membrane-associated enzyme complex that uses methyl-transfer reaction to drive sodium-ion pump. 5-methyl-5,6,7,8-tetrahydromethanopterin + 2-mercaptoethanesulphonate = 5,6,7,8-tetrahydromethanopterin + 2-(methylthio)ethanesulphonate. Archaea have evolved energy-yielding pathways marked by one-carbon biochemistry featuring novel cofactors and enzymes. This transferase (encoded by subunit A) is involved in the transfer of 'methyl' group from N5-methyltetrahydromethanopterin to coenzyme M. In an accompanying reaction, methane is produced by two-electron reduction of methyl-coenzyme M by another enzyme, methyl-coenzyme M reductase. In some organisms this domain is found at the N-terminal region of what appears to be a fusion of the MtrA and MtrF proteins [, ]. The function of these proteins is unknown, though it is likely that they are involved in C1 metabolism. ; GO: 0008168 methyltransferase activity, 0030269 tetrahydromethanopterin S-methyltransferase activity
Probab=23.82 E-value=95 Score=25.60 Aligned_cols=35 Identities=26% Similarity=0.517 Sum_probs=25.4
Q ss_pred HHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhH
Q 021410 21 LNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSL 55 (312)
Q Consensus 21 L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~ 55 (312)
+...+..+-.||++|.+||.|.. +..-+|.-|..+
T Consensus 55 IEKvI~NvisNpnIRflilcG~Ev~GH~~Gqsl~aL 90 (176)
T PF04208_consen 55 IEKVIANVISNPNIRFLILCGSEVKGHLTGQSLLAL 90 (176)
T ss_pred HHHHHHHHhcCCCceEEEEecCccCCCcchHHHHHH
Confidence 55667788889999999999975 545555544444
No 229
>TIGR01111 mtrA N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit A. coenzyme M methyltransferase subunit A in methanogenic archaea. This methyltranferase is a membrane-associated enzyme complex that uses methyl-transfer reaction to drive sodium-ion pump. Archaea have evolved energy-yielding pathways marked by one-carbon biochemistry featuring novel cofactors and enzymes. This transferase (encoded by subunit A) is involved in the transfer of 'methyl' group from N5-methyltetrahydromethanopterin to coenzyme M. In an accompanying reaction, methane is produced by two-electron reduction of methyl-coenzyme M by another enzyme, methyl-coenzyme M reductase.
Probab=23.75 E-value=1.1e+02 Score=26.42 Aligned_cols=36 Identities=25% Similarity=0.425 Sum_probs=27.1
Q ss_pred HHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHH
Q 021410 21 LNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLY 56 (312)
Q Consensus 21 L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~ 56 (312)
+...+..+-.||++|.+|+.|.. +..-+|.-|..+.
T Consensus 59 IEKvIaNvisNpNIRflilcG~Ev~GHltGqsL~aLh 95 (238)
T TIGR01111 59 IEKVVANIISNPNIRFLILCGSEVQGHITGQSFKALH 95 (238)
T ss_pred HHHHHHHHhcCCCceEEEEecCcccCccccHHHHHHH
Confidence 55667778889999999999986 5666666665544
No 230
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=23.41 E-value=5.2e+02 Score=23.48 Aligned_cols=110 Identities=15% Similarity=0.053 Sum_probs=58.3
Q ss_pred CCCCCCHHHHHHHHHHH-HHhhcCCCceEEEEEeCC-CceeccCCc-hhHHHh----hccC--------ChHHHHHHHHH
Q 021410 9 ALNALNTNMGAKLNKLF-KAWENDPNIGFVSMKGSG-RAFCAGGDI-VSLYHF----MNQG--------KLEECKDFFRT 73 (312)
Q Consensus 9 ~~Nal~~~~~~~L~~~l-~~~~~d~~v~~vvl~g~g-~~F~aG~Dl-~~~~~~----~~~~--------~~~~~~~~~~~ 73 (312)
..|.++++-+.+-...+ .++...+.-++.||-|.. +.|--+-+. ..+... .... ...........
T Consensus 121 a~~~i~~~~l~~a~~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~~~~~vttSRRTp~~~~~~ 200 (311)
T PF06258_consen 121 APNRITPERLAEAAAAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYGGSLLVTTSRRTPPEAEAA 200 (311)
T ss_pred CCCcCCHHHHHHHHHhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCCCeEEEEcCCCCcHHHHHH
Confidence 35889998888766665 455666666667666653 666544441 111111 0000 00011111111
Q ss_pred HHHHHHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCC
Q 021410 74 LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123 (312)
Q Consensus 74 ~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~ 123 (312)
+ ...+. +.|-+-..+|.--+-=.++...||.+++|+++.=.+.|+
T Consensus 201 L---~~~~~--~~~~~~~~~~~~~nPy~~~La~ad~i~VT~DSvSMvsEA 245 (311)
T PF06258_consen 201 L---RELLK--DNPGVYIWDGTGENPYLGFLAAADAIVVTEDSVSMVSEA 245 (311)
T ss_pred H---HHhhc--CCCceEEecCCCCCcHHHHHHhCCEEEEcCccHHHHHHH
Confidence 1 11111 234443446555555577888999999999886666664
No 231
>PRK06144 enoyl-CoA hydratase; Provisional
Probab=23.38 E-value=1.4e+02 Score=26.15 Aligned_cols=86 Identities=19% Similarity=0.166 Sum_probs=51.2
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHH
Q 021410 139 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDI 217 (312)
Q Consensus 139 r~~g~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (312)
+.+... |.++.+--+.++.++..+ +..+.++.+ +..+|.++...|+.++..... .+......
T Consensus 172 ~~~~a~eA~~~Glv~~vv~~~~l~~-----------~a~~~a~~i---~~~~~~a~~~~K~~l~~~~~~---~l~~~~~~ 234 (262)
T PRK06144 172 RLLEAEEALAAGLVNEVVEDAALDA-----------RADALAELL---AAHAPLTLRATKEALRRLRRE---GLPDGDDL 234 (262)
T ss_pred CCcCHHHHHHcCCcCeecCHHHHHH-----------HHHHHHHHH---HhCCHHHHHHHHHHHHHhhhc---CHHHHHHH
Confidence 445555 788888888887765332 233445555 345788888888877643221 22223445
Q ss_pred HHhhcCC-CCHHHHHHHHHcccCCC
Q 021410 218 VDKCFGL-DTVEEIIDSLESEASLI 241 (312)
Q Consensus 218 ~~~~~~~-~~~~~~~~~l~~~~~~~ 241 (312)
+..++.. +..+.+.++++|+.+.+
T Consensus 235 ~~~~~~~~~~~e~~~af~~kr~p~~ 259 (262)
T PRK06144 235 IRMCYMSEDFREGVEAFLEKRPPKW 259 (262)
T ss_pred HHHHhcChHHHHHHHHHhcCCCCCC
Confidence 6677764 45566666788875543
No 232
>PRK14558 pyrH uridylate kinase; Provisional
Probab=22.87 E-value=3.6e+02 Score=23.10 Aligned_cols=34 Identities=12% Similarity=0.070 Sum_probs=27.1
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCc
Q 021410 11 NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRA 45 (312)
Q Consensus 11 Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~ 45 (312)
-.++.+.+..+.+.+.++... ..++||++|.|..
T Consensus 18 ~~~~~~~i~~la~~i~~~~~~-g~~viiV~GgGs~ 51 (231)
T PRK14558 18 KGFDPERVNYLVNEIKSVVEY-GFKIGIVIGAGNL 51 (231)
T ss_pred CCcCHHHHHHHHHHHHHHHHC-CCeEEEEECccHH
Confidence 358999999999999987643 4789999987653
No 233
>COG0528 PyrH Uridylate kinase [Nucleotide transport and metabolism]
Probab=22.48 E-value=1.5e+02 Score=25.79 Aligned_cols=36 Identities=8% Similarity=0.109 Sum_probs=30.4
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCce
Q 021410 10 LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAF 46 (312)
Q Consensus 10 ~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F 46 (312)
.+.+|++.+..+...+.++... .+++-|+.|.|+.|
T Consensus 22 ~~gid~~~i~~~a~~i~~~~~~-g~eV~iVvGGGni~ 57 (238)
T COG0528 22 GFGIDPEVLDRIANEIKELVDL-GVEVAVVVGGGNIA 57 (238)
T ss_pred CCCCCHHHHHHHHHHHHHHHhc-CcEEEEEECCCHHH
Confidence 4679999999999999999865 68998888887655
No 234
>COG0252 AnsB L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D [Amino acid transport and metabolism / Translation, ribosomal structure and biogenesis]
Probab=22.38 E-value=3.9e+02 Score=24.88 Aligned_cols=31 Identities=10% Similarity=0.084 Sum_probs=25.1
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCceEEEEEe
Q 021410 11 NALNTNMGAKLNKLFKAWENDPNIGFVSMKG 41 (312)
Q Consensus 11 Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g 41 (312)
..|+++.+.+|.+.+.+.-.++++..||||-
T Consensus 78 ~~m~~~~w~~la~~I~~~~~~~~~dGvVItH 108 (351)
T COG0252 78 SDMTPEDWLRLAEAINEALDDGDVDGVVITH 108 (351)
T ss_pred ccCCHHHHHHHHHHHHHHhccCCCCeEEEeC
Confidence 5589999999999999988887766666653
No 235
>PF01713 Smr: Smr domain; InterPro: IPR002625 This family includes the Smr (Small MutS Related) proteins, and the C-terminal region of the MutS2 protein. It has been suggested that this domain interacts with the MutS1 (P23909 from SWISSPROT) protein in the case of Smr proteins and with the N-terminal MutS related region of MutS2, P94545 from SWISSPROT [].; PDB: 3QD7_X 2D9I_A 3FAU_A 2VKC_A 2ZQE_A.
Probab=21.67 E-value=1.5e+02 Score=20.66 Aligned_cols=35 Identities=11% Similarity=0.097 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHhhcCCCceEEEEEeCCCceecc
Q 021410 15 TNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAG 49 (312)
Q Consensus 15 ~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG 49 (312)
.+....|.+.++.+.....-.+.||||.|.+=..|
T Consensus 9 ~eA~~~l~~~l~~~~~~~~~~~~II~G~G~hS~~g 43 (83)
T PF01713_consen 9 EEALRALEEFLDEARQRGIRELRIITGKGNHSKGG 43 (83)
T ss_dssp HHHHHHHHHHHHHHHHTTHSEEEEE--STCTCCTS
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEEeccCCCCCCC
Confidence 45677888888888877778899999998443333
No 236
>KOG3179 consensus Predicted glutamine synthetase [Nucleotide transport and metabolism]
Probab=21.58 E-value=1.9e+02 Score=24.76 Aligned_cols=43 Identities=28% Similarity=0.221 Sum_probs=28.6
Q ss_pred ceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEccc
Q 021410 34 IGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGV 95 (312)
Q Consensus 34 v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~ 95 (312)
...+||||+. ++|+ |..++. .+..+...+..+.|+++..+-||
T Consensus 60 y~gfvIsGS~~dAf~---d~dWI~----------------KLcs~~kkld~mkkkvlGICFGH 103 (245)
T KOG3179|consen 60 YDGFVISGSKHDAFS---DADWIK----------------KLCSFVKKLDFMKKKVLGICFGH 103 (245)
T ss_pred hceEEEeCCcccccc---cchHHH----------------HHHHHHHHHHhhccceEEEeccH
Confidence 5688888886 7776 554443 33445556666778888776665
No 237
>TIGR02153 gatD_arch glutamyl-tRNA(Gln) amidotransferase, subunit D. This peptide is found only in the Archaea. It is part of a heterodimer, with GatE (TIGR00134), that acts as an amidotransferase on misacylated Glu-tRNA(Gln) to produce Gln-tRNA(Gln). The analogous amidotransferase found in bacteria is the GatABC system, although GatABC homologs in the Archaea appear to act instead on Asp-tRNA(Asn).
Probab=21.33 E-value=3.5e+02 Score=25.70 Aligned_cols=32 Identities=13% Similarity=0.145 Sum_probs=21.8
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCceEEEEEeC
Q 021410 11 NALNTNMGAKLNKLFKAWENDPNIGFVSMKGS 42 (312)
Q Consensus 11 Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~ 42 (312)
.-|+++.|..|.+.+.+.-.+..-.+||..|.
T Consensus 118 ~~mtp~~w~~La~~I~~~~~~~~dGvVVtHGT 149 (404)
T TIGR02153 118 ENMKPEYWIKIAEAVAKALKEGADGVVVAHGT 149 (404)
T ss_pred hhCCHHHHHHHHHHHHHHhhcCCCcEEEecCC
Confidence 34789999999999977655433345555554
No 238
>COG4637 Predicted ATPase [General function prediction only]
Probab=21.15 E-value=1.9e+02 Score=26.74 Aligned_cols=38 Identities=16% Similarity=0.339 Sum_probs=31.2
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeC
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGS 42 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~ 42 (312)
+|.+|-|+ |.+-++++.+|...+.++.... .++|.|-+
T Consensus 293 ll~ldEPE--~sLHP~lL~~La~~~~sAak~s--Qv~VsTHS 330 (373)
T COG4637 293 LLLLDEPE--TSLHPDLLPALAELMRSAAKRS--QVIVSTHS 330 (373)
T ss_pred eeEecCcc--cccCHhHHHHHHHHHHHhhccc--eEEEEeCC
Confidence 46789998 9999999999999999998764 56666654
No 239
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=20.91 E-value=2e+02 Score=24.56 Aligned_cols=38 Identities=21% Similarity=0.385 Sum_probs=28.1
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEE
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMK 40 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~ 40 (312)
++.||.|- +.+|......+.+.+.++.+.....+|+++
T Consensus 151 llllDEP~--~gLD~~~~~~l~~~l~~~~~~~~~tiii~s 188 (232)
T cd03300 151 VLLLDEPL--GALDLKLRKDMQLELKRLQKELGITFVFVT 188 (232)
T ss_pred EEEEcCCc--ccCCHHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 36688885 899999999999999988764334444443
No 240
>PF14532 Sigma54_activ_2: Sigma-54 interaction domain; PDB: 3CO5_B 3N70_H.
Probab=20.64 E-value=2e+02 Score=22.17 Aligned_cols=44 Identities=20% Similarity=0.295 Sum_probs=29.9
Q ss_pred CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHH
Q 021410 1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLY 56 (312)
Q Consensus 1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~ 56 (312)
|+.|++.+. ++.+....|.+.++..+ +.++|+|. +++.|+..+.
T Consensus 72 tL~l~~i~~---L~~~~Q~~L~~~l~~~~-~~~~RlI~--------ss~~~l~~l~ 115 (138)
T PF14532_consen 72 TLYLKNIDR---LSPEAQRRLLDLLKRQE-RSNVRLIA--------SSSQDLEELV 115 (138)
T ss_dssp EEEEECGCC---S-HHHHHHHHHHHHHCT-TTTSEEEE--------EECC-CCCHH
T ss_pred EEEECChHH---CCHHHHHHHHHHHHhcC-CCCeEEEE--------EeCCCHHHHh
Confidence 356777665 89999999999998865 55688874 4556665543
No 241
>PRK08260 enoyl-CoA hydratase; Provisional
Probab=20.56 E-value=2.1e+02 Score=25.65 Aligned_cols=90 Identities=9% Similarity=-0.021 Sum_probs=52.2
Q ss_pred hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhc-CCHHHHHHHHHHhccccCC--CcchhhhH
Q 021410 139 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVT-DDPSVIEACLEKYSDLVYP--DKNSVIHR 214 (312)
Q Consensus 139 r~~g~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 214 (312)
+.+... |.++.+--+.++.++.... ..+.++.+ +. .+|.++...|+.++..... ........
T Consensus 182 ~~~~a~eA~~~GLv~~vv~~~~l~~~-----------a~~~a~~i---~~~~~~~a~~~~K~~l~~~~~~~~~~~~~~~e 247 (296)
T PRK08260 182 RVFDAQEALDGGLVRSVHPPDELLPA-----------ARALAREI---ADNTSPVSVALTRQMMWRMAGADHPMEAHRVD 247 (296)
T ss_pred CccCHHHHHHCCCceeecCHHHHHHH-----------HHHHHHHH---HhcCChHHHHHHHHHHHhcccCCCcHHHHHHH
Confidence 344545 7888887787776665332 23345444 33 3678888888887654321 11122223
Q ss_pred HHHHHhhcC-CCCHHHHHHHHHcccCCCC
Q 021410 215 IDIVDKCFG-LDTVEEIIDSLESEASLIN 242 (312)
Q Consensus 215 ~~~~~~~~~-~~~~~~~~~~l~~~~~~~~ 242 (312)
...+..++. .+..+.+.++++++.+.+.
T Consensus 248 ~~~~~~~~~~~d~~egi~af~~kr~p~f~ 276 (296)
T PRK08260 248 SRAIYSRGRSGDGKEGVSSFLEKRPAVFP 276 (296)
T ss_pred HHHHHHHccChhHHHHHHHHhcCCCCCCC
Confidence 345566665 5556777777888865543
No 242
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=20.51 E-value=2.4e+02 Score=22.57 Aligned_cols=36 Identities=22% Similarity=0.319 Sum_probs=27.1
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEe
Q 021410 2 AILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKG 41 (312)
Q Consensus 2 itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g 41 (312)
+.+|.|- +.+|.+....+.+.+.++.++ .. .||+++
T Consensus 104 lllDEP~--~~LD~~~~~~l~~~l~~~~~~-~~-tiii~s 139 (163)
T cd03216 104 LILDEPT--AALTPAEVERLFKVIRRLRAQ-GV-AVIFIS 139 (163)
T ss_pred EEEECCC--cCCCHHHHHHHHHHHHHHHHC-CC-EEEEEe
Confidence 5678884 899999999999999988644 33 444444
Done!