BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 021411
         (312 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q40784|AAPC_CENCI Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2
           SV=1
          Length = 329

 Score =  412 bits (1058), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 192/299 (64%), Positives = 241/299 (80%), Gaps = 3/299 (1%)

Query: 15  EIAKDWNGIDQVVLRSPHGPSAKVSLYGGQITSWRNEKGEELLFTSSKAIFKPPKAIRGG 74
           E+ K  +G+++VVLR      A++ LYGGQ+TSW+N+ GEELLF SSKAIFKPPKAIRGG
Sbjct: 25  ELVKTPSGLEKVVLRGARNCCAEIYLYGGQVTSWKNDNGEELLFLSSKAIFKPPKAIRGG 84

Query: 75  ISTCFPQFGNCGSPELHGFARNKLWIIDDNPPPMPPNDSDGKTCVDLLLKPSEEDPKCWP 134
           I  C PQFG  G+ E HGFARN+ W ID++PPP+P N +  K  VDL+L+P+EED K WP
Sbjct: 85  IPICLPQFGTHGNLEQHGFARNRFWSIDNDPPPLPVNPAI-KAFVDLILRPAEEDLKIWP 143

Query: 135 YSFEYRLRVMLAADGGLTLISRVRNIN--GKPFNFSFAYHTYLLVSDISEVRIEGLETLD 192
           +SFE+RLRV L   G L+L SR+RN N  G+PF+++FAYHTY  VSDISEVR+EGLET+D
Sbjct: 144 HSFEFRLRVALGPSGDLSLTSRIRNTNTDGRPFSYTFAYHTYFFVSDISEVRVEGLETMD 203

Query: 193 YLDNLRQRERFTEQGDAVTIESEMDRVYLRSPNVIAVLDHERKRTFVLRKEGLSDVVVWN 252
           YLDNL+ +ERFTEQGDA+  ESE+D+VYL +P+ IA++DHE+K+TFV+ KEGL D VVWN
Sbjct: 204 YLDNLKAKERFTEQGDAIVFESEVDKVYLAAPSKIAIIDHEKKKTFVVTKEGLPDAVVWN 263

Query: 253 PWEKRSKSMVDFGDEEYKQMLCVDAAAVEKPITLKPGEEWTGRLQLLVVPSSFCSEQFE 311
           PW+K++K+M DFGD EYK MLCV+ AAVEKPITLKPGEEW GR+ L  VPSS+CS Q +
Sbjct: 264 PWDKKAKAMQDFGDAEYKNMLCVEPAAVEKPITLKPGEEWRGRIALSAVPSSYCSGQLD 322


>sp|Q03161|YMY9_YEAST Glucose-6-phosphate 1-epimerase OS=Saccharomyces cerevisiae (strain
           ATCC 204508 / S288c) GN=YMR099C PE=1 SV=1
          Length = 297

 Score =  129 bits (323), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 93/301 (30%), Positives = 138/301 (45%), Gaps = 31/301 (10%)

Query: 25  QVVLRSPHGPSAKVSL--YGGQITSWRNEKGEELLFTSSKAIFKPPKAIRGGISTCFPQF 82
           +VVL  P   +  V +  YG  + SW+  K EE L+ S+ A     K +RGGI   FP F
Sbjct: 9   EVVLTHPADETTSVHILKYGATVYSWK-LKSEEQLWLSTAAKLDGSKPVRGGIPLVFPVF 67

Query: 83  GNCGSPE------LHGFARNKLWIIDDNPPPMPPNDSDGKTCVDLLLKPSEEDP---KCW 133
           G   + E       HG ARN  W         PP        V   LKP   +P   K W
Sbjct: 68  GKNSTDEHLSKLPQHGLARNSTWEFLGQTKENPP-------TVQFGLKPEIANPELTKLW 120

Query: 134 PYSFEYRLRVMLAADGGLTLISRVRNINGKPFNFSFAYHTYLLVSDISEVRIEGLETLDY 193
           P  +   L V L +D   T I      + K   F++ +HTY  + DI    +  L  +  
Sbjct: 121 PMDYLLILTVELGSDYLKTAIEVENTSSSKELKFNWLFHTYFRIEDIEGTMVSNLAGMKL 180

Query: 194 LDNLRQRERFTEQGDAVTIESEMDRVY--LRSPNVIAVLDHERKRTFVLRKEGLSDVVVW 251
            D L  +E + ++   VT   E D +Y  + +   I ++D +  +   L++  L D VVW
Sbjct: 181 YDQLL-KESYVDKHPVVTFNQETDVIYQNVSAERAIQIVD-KGVQIHTLKRYNLPDTVVW 238

Query: 252 NPWEKRSKSMVDFGDEE-YKQMLCVDAAAVEKPITLKPGEEWTGRLQLLVVPSSFCSEQF 310
           NPW ++S+ M DF  +  Y+QM+C++   V   I+L PG++W    QLL      C E+ 
Sbjct: 239 NPWIEKSQGMADFEPKTGYQQMICIEPGHVHDFISLAPGKKWNA-YQLL------CKEEL 291

Query: 311 E 311
           +
Sbjct: 292 K 292


>sp|P39173|YEAD_ECOLI Putative glucose-6-phosphate 1-epimerase OS=Escherichia coli
           (strain K12) GN=yeaD PE=1 SV=2
          Length = 294

 Score =  108 bits (271), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 113/258 (43%), Gaps = 16/258 (6%)

Query: 23  IDQVVLRSPHGPSAKVSLYGGQITSWRNEKGEELLFTSSKAIFKPPKAIRGGISTCFPQF 82
           +D +V+  P    A  +L G  + SW+    EE+L+ S+   FK   AIRGG+  C+P F
Sbjct: 26  LDLIVVDHPQ-VKASFALQGAHLLSWKPAGEEEVLWLSNNTPFKNGVAIRGGVPVCWPWF 84

Query: 83  GNCGSPEL--HGFARNKLWIIDDNPPPMPPNDSDGKTCVDLLLKPSEEDPKCWPYSFEYR 140
           G      L  HGFARN  W +  +       D+DG   +   L  SEE  K WP+ F   
Sbjct: 85  GPAAQQGLPAHGFARNLPWTLKSH-----HEDADG-VALTFELTQSEETKKFWPHDFTLL 138

Query: 141 LRVMLAADGGLTLISRVRNINGKPFNFSFAYHTYLLVSDISEVRIEGLETLDYLDNLRQR 200
               +     + L S         F  + A HTY  V DI++V + GL    ++D +   
Sbjct: 139 AHFRVGKTCEIDLESH------GEFETTSALHTYFNVGDIAKVSVSGLGD-RFIDKVNDA 191

Query: 201 ERFTEQGDAVTIESEMDRVYLRSPNVIAVLDHERKRTFVLRKEGLSDVVVWNPWEKRSKS 260
           +         T     DRVYL   +   + D    R   +  +   +VV WNP    S S
Sbjct: 192 KENVLTDGIQTFPDRTDRVYLNPQDCSVINDEALNRIIAVGHQHHLNVVGWNPGPALSIS 251

Query: 261 MVDFGDEEYKQMLCVDAA 278
           M D  D+ YK  +CV+ A
Sbjct: 252 MGDMPDDGYKTFVCVETA 269


>sp|P44160|Y1317_HAEIN Putative glucose-6-phosphate 1-epimerase OS=Haemophilus influenzae
           (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_1317
           PE=3 SV=1
          Length = 271

 Score = 75.5 bits (184), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 95/228 (41%), Gaps = 26/228 (11%)

Query: 54  EELLFTSSKAIFKPPKAIRGGISTCFPQFGNCGSPELHGFARNKLWIIDDNPPPMPPNDS 113
           +++L+ S    FK   AIRGG+  C+P FG    P  HG AR +LW +      +     
Sbjct: 53  QDVLWLSEVEPFKNGNAIRGGVPICYPWFGGVKQPA-HGTARIRLWQLSHYYISVHKVRL 111

Query: 114 DGKTCVDLLLKPSEEDPKCWPYSFEYRLRVMLAADGGLTLISRVRNINGKPFNFSFAYHT 173
           + +   DL +              E ++ ++      LT             +   A HT
Sbjct: 112 EFELFSDLNI-------------IEAKVSMVFTDKCHLTFTHYGEE------SAQAALHT 152

Query: 174 YLLVSDISEVRIEGLETLDYLDNLRQRERFTEQGDAVTIESEMDRVYLRSPNVIAVLDHE 233
           Y  + DI++V ++GL    +    +Q+E          I   +D +Y        +LD  
Sbjct: 153 YFNIGDINQVEVQGLPETCFNSLNQQQENVPSPRH---ISENVDCIYSAENMQNQILDKS 209

Query: 234 RKRTFVLRKEGLSDVVVWNPWEKRSKSMVDFGDEEYKQMLCVDAAAVE 281
             RT  L     S  V+WNPW K++  M + G   Y++MLC++ A + 
Sbjct: 210 FNRTIALHHHNASQFVLWNPWHKKTSGMSETG---YQKMLCLETARIH 254


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.319    0.137    0.426 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 125,133,406
Number of Sequences: 539616
Number of extensions: 5420516
Number of successful extensions: 11860
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 11845
Number of HSP's gapped (non-prelim): 12
length of query: 312
length of database: 191,569,459
effective HSP length: 117
effective length of query: 195
effective length of database: 128,434,387
effective search space: 25044705465
effective search space used: 25044705465
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)