Query 021411
Match_columns 312
No_of_seqs 219 out of 1235
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 03:45:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021411.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021411hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2hta_A Putative enzyme related 100.0 1.1E-53 3.8E-58 392.8 26.0 277 10-301 29-307 (309)
2 1jov_A HI1317; hypothetical pr 100.0 4.1E-53 1.4E-57 381.8 26.5 259 11-299 10-269 (270)
3 2cir_A Hexose-6-phosphate muta 100.0 1.4E-53 4.8E-58 390.2 22.8 271 21-302 5-290 (297)
4 3k25_A SLR1438 protein; struct 100.0 1.8E-51 6.1E-56 374.7 26.9 262 15-302 3-288 (289)
5 3q1n_A Galactose mutarotase re 100.0 3.3E-44 1.1E-48 327.5 25.6 247 25-301 2-294 (294)
6 3dcd_A Galactose mutarotase re 100.0 4.4E-44 1.5E-48 328.2 25.1 245 25-302 2-293 (307)
7 3os7_A Galactose mutarotase-li 100.0 1.8E-43 6.3E-48 328.9 24.1 259 19-302 14-340 (341)
8 3nre_A Aldose 1-epimerase; str 100.0 4.4E-43 1.5E-47 319.4 25.2 246 22-302 1-290 (291)
9 3mwx_A Aldose 1-epimerase; str 100.0 1.8E-43 6.3E-48 327.1 19.8 261 19-303 10-324 (326)
10 1yga_A Hypothetical 37.9 kDa p 100.0 1.9E-40 6.3E-45 308.9 23.1 264 19-301 6-341 (342)
11 1snz_A Aldose 1-epimerase; mut 100.0 1.8E-38 6.2E-43 295.6 21.0 261 21-302 19-343 (344)
12 1nsx_A Galactose mutarotase; e 100.0 1.3E-36 4.6E-41 283.0 20.0 261 22-304 11-340 (347)
13 1lur_A Aldose 1-epimerase; vit 100.0 1.1E-36 3.6E-41 283.0 18.4 261 20-302 10-337 (339)
14 3imh_A Galactose-1-epimerase; 100.0 3.5E-34 1.2E-38 264.7 24.1 261 22-303 17-332 (338)
15 1z45_A GAL10 bifunctional prot 100.0 4.3E-34 1.5E-38 289.0 21.8 261 20-300 370-698 (699)
16 3ty1_A Hypothetical aldose 1-e 99.9 1.9E-24 6.5E-29 203.2 18.8 257 20-302 45-353 (384)
17 3bs6_A Inner membrane protein 94.8 0.66 2.2E-05 40.9 14.0 124 24-168 4-136 (280)
18 3blc_A Inner membrane protein 94.0 0.66 2.3E-05 41.9 12.4 122 23-167 34-166 (330)
19 3isy_A Bsupi, intracellular pr 77.0 5.6 0.00019 30.3 6.0 33 136-169 6-38 (120)
20 4ep8_B Urease subunit beta; al 74.6 2.7 9.3E-05 30.7 3.4 31 143-176 13-43 (101)
21 4ubp_B Protein (urease (chain 66.4 4.1 0.00014 31.0 2.9 31 143-176 19-49 (126)
22 4ac7_B Urease subunit beta; hy 66.4 4.1 0.00014 31.0 2.9 31 143-176 19-49 (126)
23 1yew_A Particulate methane mon 57.9 10 0.00035 34.3 4.4 28 140-168 256-283 (382)
24 3rfr_A PMOB; membrane, oxidore 54.5 11 0.00037 34.6 4.0 28 140-168 290-317 (419)
25 3qga_A UREA2, fusion of urease 42.4 12 0.0004 31.4 2.1 31 143-176 118-148 (225)
26 1e9y_A Urease subunit alpha; h 38.8 13 0.00043 31.5 1.7 42 132-176 106-148 (238)
27 4fnq_A Alpha-galactosidase AGA 36.8 1.5E+02 0.005 29.5 9.5 58 115-179 129-187 (729)
28 2wnx_A Glycoside hydrolase, fa 31.7 98 0.0034 24.7 6.0 34 148-181 26-60 (170)
29 2yfo_A Alpha-galactosidase-suc 31.5 1.1E+02 0.0039 30.3 7.7 56 116-178 130-186 (720)
30 2ys4_A Hydrocephalus-inducing 30.7 54 0.0019 24.2 4.1 41 138-179 31-71 (122)
31 2kl8_A OR15; structural genomi 30.3 47 0.0016 22.0 3.1 19 137-156 29-47 (85)
32 2xbt_A Cellulosomal scaffoldin 29.1 85 0.0029 24.8 5.2 35 148-182 23-58 (160)
33 4gy7_A Urease; JACK bean, hydr 27.9 42 0.0014 34.1 3.9 31 142-175 143-173 (840)
34 2xn2_A Alpha-galactosidase; hy 25.6 1.2E+02 0.0041 30.2 6.6 56 116-178 134-190 (732)
35 3mi6_A Alpha-galactosidase; NE 25.4 1.7E+02 0.0057 29.3 7.6 47 115-168 130-177 (745)
36 1k1x_A 4-alpha-glucanotransfer 23.0 1.2E+02 0.0042 29.8 6.0 37 20-57 395-433 (659)
37 3zqx_A Cellulose 1,4-beta-cell 21.0 2.2E+02 0.0075 22.0 6.1 39 148-186 16-55 (146)
38 2e6j_A Hydin protein; PAPD, st 20.4 2.2E+02 0.0077 20.0 5.8 22 148-169 25-46 (112)
No 1
>2hta_A Putative enzyme related to aldose 1-epimerase; carbohydrate, MU YEAD, GALM, sugar phosphate, isomerase; 1.90A {Salmonella typhimurium} PDB: 2htb_A
Probab=100.00 E-value=1.1e-53 Score=392.80 Aligned_cols=277 Identities=27% Similarity=0.450 Sum_probs=240.9
Q ss_pred cccceEEeecCCCceEEEEeCCCCCEEEEEccCcEEEEEEeCCCeeEEEeCCCCccCCCCcccccceEEcCcCCCCC--C
Q 021411 10 YRAAIEIAKDWNGIDQVVLRSPHGPSAKVSLYGGQITSWRNEKGEELLFTSSKAIFKPPKAIRGGISTCFPQFGNCG--S 87 (312)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~L~n~~g~~a~v~~~Ga~l~s~~~~~g~evL~~~~~~~~~~~~~irgG~p~lfP~~gr~~--~ 87 (312)
....+++.. .++++.++|+|+. ++|+|..+||+|+||+.++|+|+||.++.+.|...+++|||+|+||||+||+. +
T Consensus 29 ~~~~~~~~~-~~~~~~~~L~n~~-~~a~I~~~GA~l~s~~~~~g~evL~~~~~~~~~~~~~~~GG~pil~P~~gRi~~g~ 106 (309)
T 2hta_A 29 LTPVLSRRQ-LDDLDLIVVDHPQ-VKASFALQGAHLLSWKPVGEEEVLWLSNNTPFKTGVALRGGVPICWPWFGPAAQQG 106 (309)
T ss_dssp CSSSEEEEE-ETTEEEEEEEETT-EEEEEETBTTEEEEEEETTSCCCBCBCTTCCCCTTCCCSBSBCEEBSCCSSCSSTT
T ss_pred CCCceEEee-cCCceEEEEeCCC-eEEEEeccCcEEEEEEeCCCCEEEeCCchHhccCCCCeeccceEEEecCCCCCCCC
Confidence 345677776 7899999999997 99999999999999998766899999988888888899999999999999986 5
Q ss_pred CCCceeeecCCcEEecCCCCCCCCCCCCceEEEEEecCCCCCCCcCCceeEEEEEEEEecCCcEEEEEEEEeCCCCceee
Q 021411 88 PELHGFARNKLWIIDDNPPPMPPNDSDGKTCVDLLLKPSEEDPKCWPYSFEYRLRVMLAADGGLTLISRVRNINGKPFNF 167 (312)
Q Consensus 88 ~~~HGfar~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~ty~L~~~~~L~i~~~v~N~~~~~~pf 167 (312)
+++|||+|++.|++++.+. +++..+|+|+|.++++++++|||+|+++++|+| +++|+|+|+++| +|||
T Consensus 107 ~~~HGfar~~~W~v~~~~~------~~~~~~v~l~l~s~~~~~~gyP~~~~l~vty~L--~~~L~i~~~~~N----~~~~ 174 (309)
T 2hta_A 107 LPSHGFARNLPWALKAHNE------DDNGVMLTFELQSSEATRKYWPHDFTLLARFKV--GKTCEIELEAHG----EFAT 174 (309)
T ss_dssp CCTTBSGGGSBCEEEEEEE------CSSCEEEEEEEECCHHHHHHSCCCCEEEEEEEE--SSSEEEEEEEES----SEEE
T ss_pred CCCccCcCCCceEEEeEec------CCCceEEEEEeCCChHHhhcCCCceEEEEEEEE--CCceEEEEEEEC----CeEe
Confidence 7999999999999986541 122378999998776678999999999999999 489999999998 8999
Q ss_pred eeeccceeecCCcCeeEEEcCCCCceeeccccccceeecCceeeecCCcceEecCCCCeEEEEeCCCCcEEEEEeeCCCC
Q 021411 168 SFAYHTYLLVSDISEVRIEGLETLDYLDNLRQRERFTEQGDAVTIESEMDRVYLRSPNVIAVLDHERKRTFVLRKEGLSD 247 (312)
Q Consensus 168 ~~g~HpYF~~~~~~~~~~~~l~~~~~~d~l~~~~~~~~~~~~~~~~~~~D~~y~~~~~~~~l~d~~~~~~i~i~~~~~~~ 247 (312)
++|+||||+++++.++.+.++ +..|+|.+++++.....+..++|..++|++|.+....++|.++.++++|+|.++++|.
T Consensus 175 ~~g~H~YFnl~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~df~~~~D~~~~~~~~~~~l~~~~~g~~l~v~~~~~p~ 253 (309)
T 2hta_A 175 TSALHSYFNVGDIANVKVSGL-GDRFIDKVNDAKEGVLTDGIQTFPDRTDRVYLNPEACSVIHDATLNRTIDVVHHHHLN 253 (309)
T ss_dssp EEEECCEEECSCGGGCEEECC-CSEEEETTTTTEEEECSSSCEECSSCEEEEESSCCSEEEEEETTTTEEEEEEEESCSE
T ss_pred hhcCCceEecCCccceEEECC-CCceEeccCCcccccccCCceecCCccCcEEeCCCCCEEEEeCCCCcEEEEEECCCCc
Confidence 999999999998777888877 6778887776554323456788888999999865567889999999999999988999
Q ss_pred EEEeCCccccccccCCCCCCCCCceEEecceeeCCCeEeCCCCEEEEEEEEEEE
Q 021411 248 VVVWNPWEKRSKSMVDFGDEEYKQMLCVDAAAVEKPITLKPGEEWTGRLQLLVV 301 (312)
Q Consensus 248 ~vvw~P~~~~~~~~~d~~~~~~~~~vCvEP~~~~~~~~L~pGe~~~~~~~i~~~ 301 (312)
+|||||+.+.++.|.|+.+++|++|||||||++.+.++|+|||+++.+++|++.
T Consensus 254 ~~vwtp~~~~~~~~~d~~~~~~~~~vClEp~~~~~~~~L~PGe~~~~~~~~~~~ 307 (309)
T 2hta_A 254 VVGWNPGPALSVSMGDMPDDGYKTFVCVETVYATAPQQATEEKPSRLAQTICVA 307 (309)
T ss_dssp EEEEECHHHHHHHCTTSCTTGGGGEEEEEEEEEEEEEEEBTTBCEEEEEEEEEE
T ss_pred EEEECCCcccccccccCCccccccEEEECeeecCCCEEECCCCeEEEEEEEEEe
Confidence 999999766677788998888999999999998788999999999999999985
No 2
>1jov_A HI1317; hypothetical protein, structure 2 function project, S2F, structural genomics, unknown function; 1.57A {Haemophilus influenzae} SCOP: b.30.5.7
Probab=100.00 E-value=4.1e-53 Score=381.76 Aligned_cols=259 Identities=27% Similarity=0.471 Sum_probs=221.8
Q ss_pred ccceEEeecCCCceEEEEeCCCCCEEEEEccCcEEEEEEeC-CCeeEEEeCCCCccCCCCcccccceEEcCcCCCCCCCC
Q 021411 11 RAAIEIAKDWNGIDQVVLRSPHGPSAKVSLYGGQITSWRNE-KGEELLFTSSKAIFKPPKAIRGGISTCFPQFGNCGSPE 89 (312)
Q Consensus 11 ~~~~~~~~~~~~~~~~~L~n~~g~~a~v~~~Ga~l~s~~~~-~g~evL~~~~~~~~~~~~~irgG~p~lfP~~gr~~~~~ 89 (312)
...+++.. .++++.++|+|+. .+|+|+++||+|+||+.+ +|+|+||+++++.|+..+++|||+|+|||||||+. ++
T Consensus 10 ~~~~~~~~-~~~~~~~~l~~~~-~~a~i~~~Ga~l~s~~~~~~g~e~Lw~~~~~~~~~~~~irGGiPvlfP~~gr~~-~~ 86 (270)
T 1jov_A 10 TPELHLVQ-HNDIPVLHLKHAV-GTAKISLQGAQLISWKPQNAKQDVLWLSEVEPFKNGNAIRGGVPICYPWFGGVK-QP 86 (270)
T ss_dssp ETTEEEEE-ETTEEEEEEEETT-EEEEEETBTTEEEEEEETTCSSCSBCBCTTCCCCTTSCCSBSCCEEBSSCGGGS-SS
T ss_pred CCceEEee-eCCceEEEEeCCC-cEEEEECCCCEEEEEEECCCCceEEEECcHHhcCCCCCccCccEEEEeccCCCC-CC
Confidence 45666654 7999999999998 799999999999999986 57999999999999999999999999999999974 79
Q ss_pred CceeeecCCcEEecCCCCCCCCCCCCceEEEEEecCCCCCCCcCCceeEEEEEEEEecCCcEEEEEEEEeCCCCceeeee
Q 021411 90 LHGFARNKLWIIDDNPPPMPPNDSDGKTCVDLLLKPSEEDPKCWPYSFEYRLRVMLAADGGLTLISRVRNINGKPFNFSF 169 (312)
Q Consensus 90 ~HGfar~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~ty~L~~~~~L~i~~~v~N~~~~~~pf~~ 169 (312)
+|||||+++|+|++.+. +++...++|.|.+++ +.|+++++|+|. |+++++|+|+|++ ||++
T Consensus 87 ~HGfaR~~~W~v~~~~~------~~~~v~l~~~l~~~~-------~~f~l~~~~~L~----l~~~~~v~N~g~~--p~~~ 147 (270)
T 1jov_A 87 AHGTARIRLWQLSHYYI------SVHKVRLEFELFSDL-------NIIEAKVSMVFT----DKCHLTFTHYGEE--SAQA 147 (270)
T ss_dssp TTBSGGGSBCEEEEEEE------ETTEEEEEEEEECTT-------SCEEEEEEEEES----SSEEEEEEECCSS--CEEE
T ss_pred CCceecCCCcEEeeecc------CCCcEEEEEEECCCc-------cccEEEEEEEEC----CeEEEEEEeCCch--hHhh
Confidence 99999999999987641 133567888887643 358999999995 7889999999985 6899
Q ss_pred eccceeecCCcCeeEEEcCCCCceeeccccccceeecCceeeecCCcceEecCCCCeEEEEeCCCCcEEEEEeeCCCCEE
Q 021411 170 AYHTYLLVSDISEVRIEGLETLDYLDNLRQRERFTEQGDAVTIESEMDRVYLRSPNVIAVLDHERKRTFVLRKEGLSDVV 249 (312)
Q Consensus 170 g~HpYF~~~~~~~~~~~~l~~~~~~d~l~~~~~~~~~~~~~~~~~~~D~~y~~~~~~~~l~d~~~~~~i~i~~~~~~~~v 249 (312)
|+||||+++++.+++|.++.+ .|+|+++..... ..+.+.+.+++|++|.++++.++|.|+..+++|+|..++++++|
T Consensus 148 g~HpyF~v~d~~~~~v~g~~~-~~~d~l~~~~~~--~~~~~~~~~~~D~vy~~~~~~~~i~d~~~~~~i~v~~~~~~~~v 224 (270)
T 1jov_A 148 ALHTYFNIGDINQVEVQGLPE-TCFNSLNQQQEN--VPSPRHISENVDCIYSAENMQNQILDKSFNRTIALHHHNASQFV 224 (270)
T ss_dssp EECCEEECSCGGGEEEESCCS-EEEETTTTEEEE--CCSSBCCSSCEEEEEECSSSEEEEEETTTTEEEEEEEESCSEEE
T ss_pred hcccceecCCcceEEEECCCC-cceeccCCcccc--cCCcccCCCCccceeCCCCCCEEEEECCCCcEEEEEEcCCCeEE
Confidence 999999999888899999854 789987754332 34567788899999998877889999999999999999999999
Q ss_pred EeCCccccccccCCCCCCCCCceEEecceeeCCCeEeCCCCEEEEEEEEE
Q 021411 250 VWNPWEKRSKSMVDFGDEEYKQMLCVDAAAVEKPITLKPGEEWTGRLQLL 299 (312)
Q Consensus 250 vw~P~~~~~~~~~d~~~~~~~~~vCvEP~~~~~~~~L~pGe~~~~~~~i~ 299 (312)
|||||. +.|+||++++|++||||||+.+ .+.|+|||+++.+++|+
T Consensus 225 vWnP~~---~~~~d~~~~~~~~fvCvEp~~~--~~~L~PGe~~~~~~~i~ 269 (270)
T 1jov_A 225 LWNPWH---KKTSGMSETGYQKMLCLETARI--HHLLEFGESLSVEISLK 269 (270)
T ss_dssp EEECTT---SCCTTCCTTGGGGEEEEEEEEE--EEEECTTCEEEEEEEEC
T ss_pred EECCCc---ccccccccccCccEEEeCcccc--ceEECCCCEEEEEEEEE
Confidence 999974 4589999999999999999764 57899999998888774
No 3
>2cir_A Hexose-6-phosphate mutarotase; hypothetical protein, isomerase; HET: BG6; 1.60A {Saccharomyces cerevisiae} PDB: 2ciq_A* 2cis_A*
Probab=100.00 E-value=1.4e-53 Score=390.16 Aligned_cols=271 Identities=32% Similarity=0.584 Sum_probs=232.3
Q ss_pred CCceEEEEeCCCCC--EEEEEccCcEEEEEEeCCCeeEEEeCCCCccCCCCcccccceEEcCcCCCCC------CCCCce
Q 021411 21 NGIDQVVLRSPHGP--SAKVSLYGGQITSWRNEKGEELLFTSSKAIFKPPKAIRGGISTCFPQFGNCG------SPELHG 92 (312)
Q Consensus 21 ~~~~~~~L~n~~g~--~a~v~~~Ga~l~s~~~~~g~evL~~~~~~~~~~~~~irgG~p~lfP~~gr~~------~~~~HG 92 (312)
++++.++|+|+++. +++|..+||+|+||+. .|+|+||.++.+.|...+++|||+|+||||+||+. ++++||
T Consensus 5 ~~~~~~~L~n~~~~~~~~~i~~~Ga~l~s~~~-~G~~vl~~~~~~~~~~~~~~~GGip~l~P~~gr~~~~~~~y~l~~HG 83 (297)
T 2cir_A 5 ETDKEVVLTHPADETTSVHILKYGATVYSWKL-KSEEQLWLSTAAKLDGSKPVRGGIPLVFPVFGKNSTDEHLSKLPQHG 83 (297)
T ss_dssp ECSSEEEEEETTEEEEEEEEETBTTEEEEEEE-TTEECBCBCTTCCCSSSSCCSBSBCEEBSCSSCCSSSTTGGGSCTTB
T ss_pred cCCCEEEEeCCCCceeEEEEECCCcEEEEEEe-CCeEEEecCcHHHhcCCCCccCCCCEEEEecCCCCCCcccCCCCCcc
Confidence 46789999999855 7999999999999998 48899999988888888999999999999999986 689999
Q ss_pred eeecCCcEEecCCCCCCCCCCCCceEEEEEecC---CCCCCCcCCceeEEEEEEEEecCCcEEEEEEEEeCC-CCceeee
Q 021411 93 FARNKLWIIDDNPPPMPPNDSDGKTCVDLLLKP---SEEDPKCWPYSFEYRLRVMLAADGGLTLISRVRNIN-GKPFNFS 168 (312)
Q Consensus 93 far~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~---~~~~~~~~P~~f~l~~ty~L~~~~~L~i~~~v~N~~-~~~~pf~ 168 (312)
|+|++.|++++.+. ++..+++|.|.+ +++++++|||+|+++++|+|. +++|+|+|+++|++ +++|||+
T Consensus 84 far~~~W~v~~~~~-------~~~~~v~l~l~s~~~~~~~~~g~P~~~~~~vty~L~-~~~L~i~~~~~N~~~d~~~~~~ 155 (297)
T 2cir_A 84 LARNSTWEFLGQTK-------ENPPTVQFGLKPEIANPELTKLWPMDYLLILTVELG-SDYLKTAIEVENTSSSKELKFN 155 (297)
T ss_dssp SGGGSBCEEEEEEE-------ETTEEEEEEECGGGSCHHHHHHSCCCCEEEEEEEEC-SSEEEEEEEEECCCSSCCEEEE
T ss_pred ccCCCceEEEeecc-------CCceEEEEEecCCCCCHHHHhhCCCcEEEEEEEEEc-CCEEEEEEEEEcCCCCcceEEe
Confidence 99999999976530 123679999987 677889999999999999999 79999999999999 9999999
Q ss_pred eeccceeecCCcCeeEEEcCCCCceeeccccccceeecCceeeecCCcceEecCCC--CeEEEEeCCCCcEEEEEeeCCC
Q 021411 169 FAYHTYLLVSDISEVRIEGLETLDYLDNLRQRERFTEQGDAVTIESEMDRVYLRSP--NVIAVLDHERKRTFVLRKEGLS 246 (312)
Q Consensus 169 ~g~HpYF~~~~~~~~~~~~l~~~~~~d~l~~~~~~~~~~~~~~~~~~~D~~y~~~~--~~~~l~d~~~~~~i~i~~~~~~ 246 (312)
+|+||||+++++.++.+.|+.+..++|.... .......+.+.+..++|++|.... ..++|.++ ++++|+|.++++|
T Consensus 156 ~~~H~YFnl~~~~~~~~~gv~~~~~~d~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~l~~~-~g~~l~v~~~~~p 233 (297)
T 2cir_A 156 WLFHTYFRIEDIEGTMVSNLAGMKLYDQLLK-ESYVDKHPVVTFNQETDVIYQNVSAERAIQIVDK-GVQIHTLKRYNLP 233 (297)
T ss_dssp EEECCEEECSCGGGEEEESCTTCEEEETTTT-EEEECCSSSBCCSSCEEEEECCCCTTCCEEEEET-TEEEEEEEEESCC
T ss_pred eecCceEeCCCccceEEecCCCCccEeccCC-ccccccCCccccCCccceEEeCCCCCccEEEEcC-CCCEEEEEecCCC
Confidence 9999999999877788888877668887543 222223456777778999997654 56889899 9999999998899
Q ss_pred CEEEeCCccccccccCCC-CCCCCCceEEecceeeCCCeEeCCCCEEEEEEEEEEEe
Q 021411 247 DVVVWNPWEKRSKSMVDF-GDEEYKQMLCVDAAAVEKPITLKPGEEWTGRLQLLVVP 302 (312)
Q Consensus 247 ~~vvw~P~~~~~~~~~d~-~~~~~~~~vCvEP~~~~~~~~L~pGe~~~~~~~i~~~~ 302 (312)
++|||||+.++++.|.|+ ++++|++|||||||+..+.++|+|||+++.+++|++..
T Consensus 234 ~~~v~t~~~~~~~~~~~~~~~~~~~~~vClEp~~~~~~~~L~pGe~~~~~~~~~~~~ 290 (297)
T 2cir_A 234 DTVVWNPWIEKSQGMADFEPKTGYQQMICIEPGHVHDFISLAPGKKWNAYQLLCKEE 290 (297)
T ss_dssp EEEEEECHHHHHHHCTTCCSTTGGGGEEEEEEEEEEEEEEECTTCEEEEEEEEECC-
T ss_pred cEEEECcchhhccccccCCCccccccEEEECceECCCCEEECCCCeEEEEEEEEEEe
Confidence 999999975556677787 67788999999999977889999999999999999864
No 4
>3k25_A SLR1438 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, SGR112, P73504_SYNY3; 2.55A {Synechocystis SP}
Probab=100.00 E-value=1.8e-51 Score=374.70 Aligned_cols=262 Identities=20% Similarity=0.363 Sum_probs=221.1
Q ss_pred EEeecCCCceEEEEeCCC-CCEEEEE-ccCcEEEEEEeCCCeeEEEeCCCCccCCCCcccccceEEcCcCCCCC------
Q 021411 15 EIAKDWNGIDQVVLRSPH-GPSAKVS-LYGGQITSWRNEKGEELLFTSSKAIFKPPKAIRGGISTCFPQFGNCG------ 86 (312)
Q Consensus 15 ~~~~~~~~~~~~~L~n~~-g~~a~v~-~~Ga~l~s~~~~~g~evL~~~~~~~~~~~~~irgG~p~lfP~~gr~~------ 86 (312)
.+.+..++++.|+|+|++ |.+++|. .+||+|+||+. +|+|+||.++.++++..+++|||+|+||||+||+.
T Consensus 3 ~~~~~~~~~~~~~l~n~~~g~~~~v~~~~Ga~l~s~~~-~g~~~l~~~~~~~~~~~~~~~gg~Pvl~P~~gri~~g~~~~ 81 (289)
T 3k25_A 3 NISFTPDRPLTYHLEDDQSLARLSLVPGRGGLVTEWTV-QGQPILYFDRERFQDPSLSVRGGIPILFPICGNLPQDQFNH 81 (289)
T ss_dssp EEEEECCBCCEEEEEETTTTEEEEEEGGGTSEEEEEEE-TTEECBCBCTTGGGSTTSCCCBSBCEEBSCSSCCGGGEEEE
T ss_pred ceeeccCCceEEEEECCCCCeEEEeehhcCCEEEEEEe-CCEEEEecChhhccCcccccCCCCCEEECCCCCCCCCEEEE
Confidence 456667899999999975 7999998 99999999998 58999998877777777789999999999999983
Q ss_pred -----CCCCceeeecCCcEEecCCCCCCCCCCCCceEEEEEecCCCCCCCcCCceeEEEEEEEEecCCcEEEEEEEEeCC
Q 021411 87 -----SPELHGFARNKLWIIDDNPPPMPPNDSDGKTCVDLLLKPSEEDPKCWPYSFEYRLRVMLAADGGLTLISRVRNIN 161 (312)
Q Consensus 87 -----~~~~HGfar~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~ty~L~~~~~L~i~~~v~N~~ 161 (312)
++++|||+|++.|++++.+ +++..+|+|+|.++++++++|||+|+++++|+|. +++|+++++++|++
T Consensus 82 ~g~~y~l~~HGf~r~~~W~~~~~~-------~~~~~~v~l~l~~~~~~~~~~P~~~~~~~~y~L~-~~~L~i~~~~~N~~ 153 (289)
T 3k25_A 82 AGKSYRLKQHGFARDLPWEVIGQQ-------TQDNARLDLRLSHNDATLEAFPFAFELVFSYQLQ-GHSLRIEQRIANLG 153 (289)
T ss_dssp TTEEEECCTTBSGGGSCCEEEEEE-------CSSSEEEEEEEECCHHHHTTSCSCEEEEEEEEEE-TTEEEEEEEEEECS
T ss_pred CCEEeecCCCCCcccCCeEEEEec-------CCCCcEEEEEEecChhHHhcCCceEEEEEEEEEe-CCEEEEEEEEEcCC
Confidence 5899999999999998654 2346789999987766789999999999999999 89999999999999
Q ss_pred CCceeeeeeccceeecCCcCeeEEEcCCCCceeeccccccceeecCceeeec-CCcceEecCCC-CeEEEEeCCCCcEEE
Q 021411 162 GKPFNFSFAYHTYLLVSDISEVRIEGLETLDYLDNLRQRERFTEQGDAVTIE-SEMDRVYLRSP-NVIAVLDHERKRTFV 239 (312)
Q Consensus 162 ~~~~pf~~g~HpYF~~~~~~~~~~~~l~~~~~~d~l~~~~~~~~~~~~~~~~-~~~D~~y~~~~-~~~~l~d~~~~~~i~ 239 (312)
+++|||++|+||||++++..++++.++. ..|+|....... ...+.+.+. ..+|++|.+.+ ..++|.++..+++|+
T Consensus 154 ~~~~~~~~~~H~yF~~~~~~~~~~~~~~-~~~~d~~~~~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~l~~~~~~~~i~ 230 (289)
T 3k25_A 154 DQRMPFSLGFHPYFFCREKLGITLAIPA-NDYLDQKTGDCH--GYDGQLNLTSPELDLAFTQISQPRAHFIDPDRNLKIE 230 (289)
T ss_dssp SSCEEECCEECCEEECSCCTTCEEECSC-SEEEETTTCCEE--ECCSCCCTTSSEEEEEECCCSSSEEEEEETTTTEEEE
T ss_pred CCcceeEEecCcEEccCCcceEEEEcCc-ccccccccCccc--ccCCcccCCchhhceEeecCCCCeEEEEECCCCCEEE
Confidence 9999999999999999998889998764 467776432221 122334443 57899998763 578899999999999
Q ss_pred EEeeC-CCCEEEeCCccccccccCCCCCCCCCceEEecceee--------CCCeEeCCCCEEEEEEEEEEEe
Q 021411 240 LRKEG-LSDVVVWNPWEKRSKSMVDFGDEEYKQMLCVDAAAV--------EKPITLKPGEEWTGRLQLLVVP 302 (312)
Q Consensus 240 i~~~~-~~~~vvw~P~~~~~~~~~d~~~~~~~~~vCvEP~~~--------~~~~~L~pGe~~~~~~~i~~~~ 302 (312)
|..++ ++++|||||. +++|||||||++ .+.++|+|||+++++++|+++.
T Consensus 231 v~~~~~~~~~vvw~~~--------------~~~fvCvEP~~~~~da~n~~~~~~~L~PGe~~~~~~~i~v~~ 288 (289)
T 3k25_A 231 VSFSELYQTLVLWTVA--------------GKDYLCLEPWSGPRNALNSGEQLAWVEPYSSRSAWVNFQVST 288 (289)
T ss_dssp EEECTTCCEEEEEEES--------------SSCEEEEEEESSCTTHHHHCTTCEEECTTEEEEEEEEEEEEC
T ss_pred EEeCCCCcEEEEEecC--------------CCCEEEEccccCCCCcccCCCCcEEECCCCeEEEEEEEEEEe
Confidence 99876 8999999974 258999999996 2689999999999999999864
No 5
>3q1n_A Galactose mutarotase related enzyme; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.61A {Lactobacillus casei}
Probab=100.00 E-value=3.3e-44 Score=327.46 Aligned_cols=247 Identities=19% Similarity=0.343 Sum_probs=192.9
Q ss_pred EEEEeCCCCCEEEEEccCcEEEEEEeC-CCeeEEEeCCCCccCCCCcccccceEEcCcCCCCC-----------CCCCce
Q 021411 25 QVVLRSPHGPSAKVSLYGGQITSWRNE-KGEELLFTSSKAIFKPPKAIRGGISTCFPQFGNCG-----------SPELHG 92 (312)
Q Consensus 25 ~~~L~n~~g~~a~v~~~Ga~l~s~~~~-~g~evL~~~~~~~~~~~~~irgG~p~lfP~~gr~~-----------~~~~HG 92 (312)
+++|+|+. ++|+|..+||+|+||+.+ +|+|+||..++++|.. +.|+||||+||+. ++++||
T Consensus 2 ~~~l~n~~-~~~~i~~~Ga~l~s~~~~~~g~e~l~~~~~~~~~~------~~p~l~P~~~Ri~~g~~~~~G~~y~l~~HG 74 (294)
T 3q1n_A 2 MITIENSK-FKAGIAERGAELQSLVNKADNYEYVWTGDKTFWNR------HAPILFPSIGKSNQDQYRLGAKTYPMSQHG 74 (294)
T ss_dssp EEEEECSS-EEEEEETBTTEEEEEEETTTTEECBCCCCTTTCSC------SCCEEBSCCSCCGGGEEEETTEEEECCTTB
T ss_pred EEEEECCC-EEEEEEccCcEEEEEEeCCCCCEEEEcCChhhccC------CCCEEEeccCCcCCCEEEECCcEEccCCCC
Confidence 68999997 999999999999999985 5899999988877753 5799999999983 689999
Q ss_pred eeecCCcEEecCCCCCCCCCCCCceEEEEEecCCCCCCCcCCceeEEEEEEEEecCCcEEEEEEEEeCCCCceeeeeecc
Q 021411 93 FARNKLWIIDDNPPPMPPNDSDGKTCVDLLLKPSEEDPKCWPYSFEYRLRVMLAADGGLTLISRVRNINGKPFNFSFAYH 172 (312)
Q Consensus 93 far~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~ty~L~~~~~L~i~~~v~N~~~~~~pf~~g~H 172 (312)
|+|++.|++++.+ ..+|+|++.++++++++|||+|+++++|+|. +++|+|+++|+|+++++|||++|+|
T Consensus 75 f~r~~~w~~~~~~----------~~~v~l~l~~~~~~~~~yP~~~~~~v~y~L~-~~~L~i~~~~~N~~~~~~p~~~~~H 143 (294)
T 3q1n_A 75 FARDYDFDVSDKS----------DSAVTFTQHQNAETLKKFPFEYTLAVTYMLT-DGGLSVHYTVTNDDSKSMPFALGFH 143 (294)
T ss_dssp SGGGSBCEEESCC----------SSEEEEEEECCHHHHHHSCCCEEEEEEEEEE-TTEEEEEEEEEECSSSCEEECEEEC
T ss_pred CccCcceEEEEcc----------CCEEEEEEEcCcchhhcCCeEEEEEEEEEEe-CCEEEEEEEEEcCCCCceeeeEecC
Confidence 9999999998765 4579999987766678999999999999999 8999999999999999999999999
Q ss_pred ceeecCC-----cCe--eEEEcCC-CCcee--e--ccccccceee---cCceeeecC-Ccce-E--ecCC-CCeEEEEeC
Q 021411 173 TYLLVSD-----ISE--VRIEGLE-TLDYL--D--NLRQRERFTE---QGDAVTIES-EMDR-V--YLRS-PNVIAVLDH 232 (312)
Q Consensus 173 pYF~~~~-----~~~--~~~~~l~-~~~~~--d--~l~~~~~~~~---~~~~~~~~~-~~D~-~--y~~~-~~~~~l~d~ 232 (312)
|||+++. ..+ +.+..-. ...++ | .+++++.... ....+.+.. .+|+ . +... ...++|.++
T Consensus 144 ~yFnl~~~~~~~~~d~~l~~~a~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~l~~~~fd~d~~~~~~~~~~~~~l~~~ 223 (294)
T 3q1n_A 144 PAFNVGLKADGSFDDYDLTVEPLNSPLQRFGIGPVPFRNGDVEDIPGAEGNRLPLTHDLLDGGLVILANSEIAKATLASP 223 (294)
T ss_dssp CEEECCBCTTSSBCSCEEEEECCSSCCEEEEESSTTSEEEEEEECTTCBTTEEECCHHHHTTCCEEECCTTCCEEEEECT
T ss_pred cEEEcCCCCCCcccCEEEEEcCCcccceEEeeCCCCcCCCcccccccCCCceecCCHHHhcCCeEEEcCCCccEEEEEeC
Confidence 9999983 123 4554321 11132 2 2343332111 122344432 3553 3 3333 346889998
Q ss_pred CCCcEEEEEeeCCCCEEEeCCccccccccCCCCCCCCCceEEecceee--------------CCCeEeCCCCEEEEEEEE
Q 021411 233 ERKRTFVLRKEGLSDVVVWNPWEKRSKSMVDFGDEEYKQMLCVDAAAV--------------EKPITLKPGEEWTGRLQL 298 (312)
Q Consensus 233 ~~~~~i~i~~~~~~~~vvw~P~~~~~~~~~d~~~~~~~~~vCvEP~~~--------------~~~~~L~pGe~~~~~~~i 298 (312)
.+++.|+|..+++|+++||+|... .++|||||||++ .+.++|+|||+++.+++|
T Consensus 224 ~~g~~l~v~~~~~p~l~iwt~~~~------------~~~~vciEP~tg~~Da~n~~~~~~~k~g~~~L~pGe~~~~~~~I 291 (294)
T 3q1n_A 224 HHDHSITLDISDFPYLTIWSPEHK------------KAPFIAVEPFDGLPDQAGEPTDWYTKLGNTTLSAGANKQLALKV 291 (294)
T ss_dssp TCSCCEEEECTTCSEEEEECCTTS------------CCSEEEEEEEESCCCBSSSCCBTTTCTTCEEECTTCEEEEEEEE
T ss_pred CCCcEEEEEECCCCEEEEECcCCC------------CCCEEEEeCcCCCCCCCCCCCchhccCCCEEECCCCEEEEEEEE
Confidence 899999999878999999998421 158999999985 147999999999999999
Q ss_pred EEE
Q 021411 299 LVV 301 (312)
Q Consensus 299 ~~~ 301 (312)
+++
T Consensus 292 ~i~ 294 (294)
T 3q1n_A 292 ELH 294 (294)
T ss_dssp EEC
T ss_pred EEC
Confidence 874
No 6
>3dcd_A Galactose mutarotase related enzyme; Q5FKD7 LAR33 NESG X-RAY, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Lactobacillus acidophilus}
Probab=100.00 E-value=4.4e-44 Score=328.22 Aligned_cols=245 Identities=19% Similarity=0.292 Sum_probs=191.8
Q ss_pred EEEEeCCCCCEEEEEccCcEEEEEEeC-CCeeEEEeCCCCccCCCCcccccceEEcCcCCCCC-----------CCCCce
Q 021411 25 QVVLRSPHGPSAKVSLYGGQITSWRNE-KGEELLFTSSKAIFKPPKAIRGGISTCFPQFGNCG-----------SPELHG 92 (312)
Q Consensus 25 ~~~L~n~~g~~a~v~~~Ga~l~s~~~~-~g~evL~~~~~~~~~~~~~irgG~p~lfP~~gr~~-----------~~~~HG 92 (312)
+++|+|+. ++|+|..+||+|+||+.+ +|+|+||..++++|.. |+|+||||+||+. ++++||
T Consensus 2 ~~~l~n~~-~~~~i~~~GA~l~s~~~~~~~~e~l~~~~~~~~~~------~~pil~P~~nRi~~g~~~~~G~~y~l~~HG 74 (307)
T 3dcd_A 2 DYTIENNM-IKVVISDHGAEIQSVKSAHTDEEFMWQANPEIWGR------HAPVLFPIVGRLKNDEYTYKGKTYHLGQHG 74 (307)
T ss_dssp EEEEECSS-EEEEEETBTTEEEEEEETTTCCBCBCCCCTTTCCC------SSCEEBSCSSCCGGGEEEETTEEEECCTTB
T ss_pred EEEEECCC-EEEEEEccCcEEEEEEECCCCcEEEECCChhhcCC------CCcEEEeecCccCCCeEEECCEEEecCCCC
Confidence 58999998 999999999999999975 5799999988777753 6899999999983 589999
Q ss_pred eeecCCcEEecCCCCCCCCCCCCceEEEEEecCCCCCCCcCCceeEEEEEEEEecCCcEEEEEEEEeCCCCceeeeeecc
Q 021411 93 FARNKLWIIDDNPPPMPPNDSDGKTCVDLLLKPSEEDPKCWPYSFEYRLRVMLAADGGLTLISRVRNINGKPFNFSFAYH 172 (312)
Q Consensus 93 far~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~ty~L~~~~~L~i~~~v~N~~~~~~pf~~g~H 172 (312)
|+|++.|++++.+ ..+|+|++.++++++++|||+|+++++|+|. +++|+|+++|+|+|+++|||++|+|
T Consensus 75 f~r~~~w~v~~~~----------~~~v~l~l~~~~~~~~~yP~~~~~~v~y~L~-~~~L~i~~~v~N~g~~~~p~~~g~H 143 (307)
T 3dcd_A 75 FARNADFEVENHT----------KESITFLLKDNEETRKVYPFKFEFRVNYNLM-NNLLEENFSVVNKSDETMIFGVGGH 143 (307)
T ss_dssp SGGGSBCEEEEEE----------TTEEEEEEECCHHHHHHSCCCEEEEEEEEEE-TTEEEEEEEEEECSSSCEEECEEEC
T ss_pred CccCcEEEEEEec----------CCEEEEEEecCcchhhhCCCceEEEEEEEEe-CCEEEEEEEEECCCCCcEeEEEEcC
Confidence 9999999998765 4579999987666788999999999999999 8999999999999999999999999
Q ss_pred ceeecCCc-----Ce--eEEEcCCCCceee--ccccccc------eeecCceeeecC-Ccce---EecCCC--CeEEEEe
Q 021411 173 TYLLVSDI-----SE--VRIEGLETLDYLD--NLRQRER------FTEQGDAVTIES-EMDR---VYLRSP--NVIAVLD 231 (312)
Q Consensus 173 pYF~~~~~-----~~--~~~~~l~~~~~~d--~l~~~~~------~~~~~~~~~~~~-~~D~---~y~~~~--~~~~l~d 231 (312)
|||+++.. .+ +.+..- .+++ .++++.. .......+.+.. .+|+ +|.... ..++|.+
T Consensus 144 pyF~~~~~~~~~~~d~~L~~~a~---~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~fd~da~~~~~~~~~~~v~l~~ 220 (307)
T 3dcd_A 144 PGFNLPTDHGENKEDFYFDMHPS---VTRVRIPLKDASLDWNNRSLAPTDSLIALSDDLFKDDALIYELRGNDNKVSLRT 220 (307)
T ss_dssp CEEECCCTTSCCGGGEEEEEESC---CCEEECCEETTEECGGGCEEECTTSCEECCSGGGTTSCEEEECCSSCEEEEEEE
T ss_pred cEEEcCCCCCCccccEEEEEcCC---CceeeeecCCcccccccccccccCCcccCCHHHcCCceEEEcCCCCceEEEEEe
Confidence 99999842 23 444421 1221 1122111 001122334433 3442 344443 4688989
Q ss_pred CCCCcEEEEEeeCCCCEEEeCCccccccccCCCCCCCCCceEEecceee--------------CCCeEeCCCCEEEEEEE
Q 021411 232 HERKRTFVLRKEGLSDVVVWNPWEKRSKSMVDFGDEEYKQMLCVDAAAV--------------EKPITLKPGEEWTGRLQ 297 (312)
Q Consensus 232 ~~~~~~i~i~~~~~~~~vvw~P~~~~~~~~~d~~~~~~~~~vCvEP~~~--------------~~~~~L~pGe~~~~~~~ 297 (312)
+.+++.|+|..+++|+++||+|... .++|||||||++ .+.++|+|||+++.+++
T Consensus 221 ~~~g~~v~v~~~~fp~l~iwt~~~~------------~~~fvciEP~tg~~Da~n~~~~~~~k~gl~~L~PGe~~~~~~~ 288 (307)
T 3dcd_A 221 DKNKFHVNVWTRDAPFVGIWSQYPK------------TDNYVCIEPWWGIADRDDADGDLEHKYGMNHLKPGKEFQAGFS 288 (307)
T ss_dssp TTSSCEEEEEEETCSEEEEECCSSS------------CCSEEEEEEEESCCCBTTCCSBGGGCTTCEEECTTCEEEEEEE
T ss_pred CCCCcEEEEEECCCCEEEEECcCCC------------CCCEEEEccccCCCCCCCCCCchhccCCCEEECCCCEEEEEEE
Confidence 9899999999988999999998311 158999999985 14799999999999999
Q ss_pred EEEEe
Q 021411 298 LLVVP 302 (312)
Q Consensus 298 i~~~~ 302 (312)
|++..
T Consensus 289 i~~~~ 293 (307)
T 3dcd_A 289 MTYHS 293 (307)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 99875
No 7
>3os7_A Galactose mutarotase-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: PG4 TLA; 1.80A {Clostridium acetobutylicum}
Probab=100.00 E-value=1.8e-43 Score=328.86 Aligned_cols=259 Identities=20% Similarity=0.347 Sum_probs=201.3
Q ss_pred cCCCceEEEEeCCCCCEEEEE-ccCcEEEEEEeCC-CeeEEEeCCC-----CccCCCCcccccceEEcCcCCCCC-----
Q 021411 19 DWNGIDQVVLRSPHGPSAKVS-LYGGQITSWRNEK-GEELLFTSSK-----AIFKPPKAIRGGISTCFPQFGNCG----- 86 (312)
Q Consensus 19 ~~~~~~~~~L~n~~g~~a~v~-~~Ga~l~s~~~~~-g~evL~~~~~-----~~~~~~~~irgG~p~lfP~~gr~~----- 86 (312)
..+|++.++|+|+. ++|+|. .+||+|+||+.++ |+|+||..+. .++ .+++++|+||||| +||+.
T Consensus 14 ~~~g~~~~~L~n~~-~~~~i~p~~Ga~l~s~~~~~~g~~~l~~~~~~~~~~~y~--~~~~~~G~pv~~p-~nRi~~g~f~ 89 (341)
T 3os7_A 14 IWSEHKCIRFAAGG-YEALIIPDVGGNVVELKDTNKGVTILRTPKKDLKFEDFK--NRPQVYGLPVLFP-PNRIDDGTFK 89 (341)
T ss_dssp ETTTEEEEEEEETT-EEEEEETTTTTEEEEEEETTTTEECBCCCCTTCCHHHHH--HSGGGSSCCEESS-CSEEETTEEE
T ss_pred EECCEEEEEEeCCC-EEEEEchhcCCEEEEEEeCCCCCeEEEcCCcccchhhhh--hCCcccceeEeCC-CCcccCCEEE
Confidence 48999999999997 999999 9999999999863 7999998875 344 4678999999999 58862
Q ss_pred ------CC---------CCceeeecCCcEEecCCCCCCCCCCCCceEE--EEEecCCCCCCCcCCceeEEEEEEEEecCC
Q 021411 87 ------SP---------ELHGFARNKLWIIDDNPPPMPPNDSDGKTCV--DLLLKPSEEDPKCWPYSFEYRLRVMLAADG 149 (312)
Q Consensus 87 ------~~---------~~HGfar~~~W~v~~~~~~~~~~~~~~~~~v--~l~l~~~~~~~~~~P~~f~l~~ty~L~~~~ 149 (312)
++ ++|||+|++.|+++..+. +++..+| +|.+.+.++++++|||+|+++++|+|. ++
T Consensus 90 ~~G~~y~l~~N~~~~~~~lHG~~~~~~W~v~~~~~------~~~~~~v~~~~~~~d~~~~~~g~P~~~~~~v~y~L~-~~ 162 (341)
T 3os7_A 90 LGDKTYKFPINEAKNNNYIHGFIKNSKWTVHKKKI------DQDKALVEVVFDFTKENEAYKYFSHEFQFKLSYELS-SK 162 (341)
T ss_dssp ETTEEEECCCSBTTTTEEESCSGGGSCCEEEEEEE------ETTEEEEEEEEEECTTSTTTTTSCCCEEEEEEEEEE-TT
T ss_pred ECCEEEEccCCCCCCCcCccCCcccCcEEEEEeec------CCCccEEEEEEEeCCCcchhhcCCceEEEEEEEEEe-CC
Confidence 23 379999999999987641 1223444 566666667788999999999999999 78
Q ss_pred cEEEEEEEEeCCCCceeeeeeccceeecCC-----cCeeEEEcCCCCcee--e--ccccccceee--------cCceeee
Q 021411 150 GLTLISRVRNINGKPFNFSFAYHTYLLVSD-----ISEVRIEGLETLDYL--D--NLRQRERFTE--------QGDAVTI 212 (312)
Q Consensus 150 ~L~i~~~v~N~~~~~~pf~~g~HpYF~~~~-----~~~~~~~~l~~~~~~--d--~l~~~~~~~~--------~~~~~~~ 212 (312)
+|+|+++++|+++++|||++|+||||+++. +.+..+.. .+..|+ | .+|+++.... ....+..
T Consensus 163 ~L~i~~~~~N~~~~~~p~~~~~H~yF~l~~~~~~~~~~~~l~~-~a~~~~~~d~~~iPtG~~~~v~~~~~df~~~~~~~~ 241 (341)
T 3os7_A 163 GLKQTTSVVNLSSEEMPLSVGYHSAFNVPFIEGSEDSNCRVKI-SIDKFWKQDSRNLPTGESFAPTGEQKEYLENGVAVA 241 (341)
T ss_dssp EEEEEEEEEECSSSCEEECCEECCEEESSCBTTCCGGGEEEEE-CEEEEEEECTTSCEEEEEECCCGGGGGGGTTCBCTT
T ss_pred eEEEEEEEEeCCCCcEEEEEecCceeecCCCCCCCcccEEEEE-eCCcEEecCcccCCCCccccCCCccchhhcCCcccC
Confidence 999999999999999999999999999983 44445542 233443 2 3555432100 1122333
Q ss_pred cCCcceEecCC----C----CeEEEEeCCCCcEEEEEe-eCCCCEEEeCCccccccccCCCCCCCCCceEEecceee---
Q 021411 213 ESEMDRVYLRS----P----NVIAVLDHERKRTFVLRK-EGLSDVVVWNPWEKRSKSMVDFGDEEYKQMLCVDAAAV--- 280 (312)
Q Consensus 213 ~~~~D~~y~~~----~----~~~~l~d~~~~~~i~i~~-~~~~~~vvw~P~~~~~~~~~d~~~~~~~~~vCvEP~~~--- 280 (312)
..++|++|... . ..++|.++.++++|+|.+ +++|+++||+|+. +++|||||||++
T Consensus 242 ~~~~D~~f~~~~~~~~g~~~~~~~l~~~~~g~~l~v~~~~~~p~~~vwt~~~-------------~~~~vclEP~~~~pD 308 (341)
T 3os7_A 242 SHPIESLFSLKDIDVNGKTFRGACIEDASKNTRVVYEMSSEYKYLVIWNDMG-------------DKKYACIEPQTSIIN 308 (341)
T ss_dssp SSCCEEEEEECCEEETTEEECEEEEEEGGGTEEEEEEECTTCCEEEEECGGG-------------CSSEEEEEEESSCTT
T ss_pred CcchhhhccccccccCCCcceEEEEEeCCCCeEEEEEeCCCCCEEEEEcCCC-------------CCCEEEECCccCCCC
Confidence 45799999754 2 358888998999999998 4799999999863 258999999974
Q ss_pred --C--------CCeEeCCCCEEEEEEEEEEEe
Q 021411 281 --E--------KPITLKPGEEWTGRLQLLVVP 302 (312)
Q Consensus 281 --~--------~~~~L~pGe~~~~~~~i~~~~ 302 (312)
+ +.++|+|||+++.+++|+++.
T Consensus 309 a~n~~~~~~~~g~~~L~PGe~~~~~~~i~v~~ 340 (341)
T 3os7_A 309 SPNVKLDRSVSGFKTLKPNESWSGVCKLYIEN 340 (341)
T ss_dssp GGGCSSCHHHHCCEEECTTCEEEEEEEEEEEE
T ss_pred ccCCCCcccccCceEECCCCEEEEEEEEEEEe
Confidence 1 479999999999999999875
No 8
>3nre_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.59A {Escherichia coli}
Probab=100.00 E-value=4.4e-43 Score=319.37 Aligned_cols=246 Identities=16% Similarity=0.176 Sum_probs=198.1
Q ss_pred CceEEEEeCCCCCEEEEEcc-CcEEEEEEeCCCeeEEEeCCCCccCCCCcccccceEEcCcCCCCC--------------
Q 021411 22 GIDQVVLRSPHGPSAKVSLY-GGQITSWRNEKGEELLFTSSKAIFKPPKAIRGGISTCFPQFGNCG-------------- 86 (312)
Q Consensus 22 ~~~~~~L~n~~g~~a~v~~~-Ga~l~s~~~~~g~evL~~~~~~~~~~~~~irgG~p~lfP~~gr~~-------------- 86 (312)
|++.++|+|+. ++|+|..+ ||+|+|| . +|+|+||..++. .+++++|.|+||||+||+.
T Consensus 1 g~~~~~l~n~~-~~~~i~~~~Ga~l~s~-~-~g~~vl~~~~~~----~~~~~~~g~~l~p~~nRi~~g~~~~~G~~y~l~ 73 (291)
T 3nre_A 1 GMTIYTLSHGS-LKLDVSDQGGVIEGFW-R-DTTPLLRPGKKS----GVATDASCFPLVPFANRVSGNRFVWQGREYQLQ 73 (291)
T ss_dssp CCCEEEEEETT-EEEEEETBTTEEEEEE-E-TTEESSCCCCCS----SCGGGSSEEEEBSCCSBCGGGEEEETTEEEECC
T ss_pred CccEEEEcCCC-EEEEEEcccCceEEEE-e-CCCEEEECCCcc----cCccccCCcEEEeeCCEecCCEEEECCEEEECC
Confidence 57889999997 99999975 9999999 5 689999987732 4578899999999999983
Q ss_pred ------CCCCceeeecCCcEEecCCCCCCCCCCCCceEEEEEecCCCCCCCcCCceeEEEEEEEEecCCcEEEEEEEEeC
Q 021411 87 ------SPELHGFARNKLWIIDDNPPPMPPNDSDGKTCVDLLLKPSEEDPKCWPYSFEYRLRVMLAADGGLTLISRVRNI 160 (312)
Q Consensus 87 ------~~~~HGfar~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~ty~L~~~~~L~i~~~v~N~ 160 (312)
++++|||+|++.|++++.+ ..+|+|+|.+. + |||+|+++++|+|. +++|+|+++++|+
T Consensus 74 ~N~~~~~~~~HG~~~~~~W~~~~~~----------~~~v~l~l~~~----~-~P~~~~~~v~y~L~-~~~L~i~~~~~N~ 137 (291)
T 3nre_A 74 PNVEWDAHYLHGDGWLGEWQCVSHS----------DDSLCLVYEHR----S-GVYHYRVSQAFHLT-ADTLTVTLSVTNQ 137 (291)
T ss_dssp CCSTTCSSCBSBSGGGSBCEEEEEC----------SSEEEEEEEEE----S-SSCEEEEEEEEEEC-SSEEEEEEEEEEC
T ss_pred CCCCCCCCCCCCchhcceeEEEEcc----------CCEEEEEEeCC----C-CCceEEEEEEEEEe-CCeEEEEEEEEEC
Confidence 3579999999999998765 35688888752 6 99999999999999 8999999999999
Q ss_pred CCCceeeeeeccceeecCCcCeeEEEcCCCCceee----ccccccceeecCceeeec-------CCcceEecCCCCeEEE
Q 021411 161 NGKPFNFSFAYHTYLLVSDISEVRIEGLETLDYLD----NLRQRERFTEQGDAVTIE-------SEMDRVYLRSPNVIAV 229 (312)
Q Consensus 161 ~~~~~pf~~g~HpYF~~~~~~~~~~~~l~~~~~~d----~l~~~~~~~~~~~~~~~~-------~~~D~~y~~~~~~~~l 229 (312)
++++|||++|+||||++++...+.+. +..|++ .+|+++... .+..++|. .++|++|......++|
T Consensus 138 ~~~~~~~~~~~H~YFnl~~~~~l~i~---a~~~~~~d~~~iPtg~~~v-~~t~~df~~~~~l~~~~~D~~f~~~~~~a~l 213 (291)
T 3nre_A 138 GAETLPFGTGWHPYFPLSPQTRIQAQ---ASGYWLEREQWLAGEFCEQ-LPQELDFNQPAPLPRQWVNNGFAGWNGQARI 213 (291)
T ss_dssp SSSCEEECCEEEEEEECCTTCEEEEC---CSEEEEECGGGCEEEEESS-CCGGGCCSSCEECCSSCEEEEEESCCSEEEE
T ss_pred CCCCccceEEcCccEecCCCeEEEEE---CCEEEEcCCCcCCCccccC-CCCcccccCCcCCCCccccceeecCCccEEE
Confidence 99999999999999999886666665 345542 466655321 23445553 3699999887778899
Q ss_pred EeCCCCcEEEEEeeC-CCCEEEeCCccccccccCCCCCCCCC-ceEEecceee-----C-----CCeEeCCCCEEEEEEE
Q 021411 230 LDHERKRTFVLRKEG-LSDVVVWNPWEKRSKSMVDFGDEEYK-QMLCVDAAAV-----E-----KPITLKPGEEWTGRLQ 297 (312)
Q Consensus 230 ~d~~~~~~i~i~~~~-~~~~vvw~P~~~~~~~~~d~~~~~~~-~~vCvEP~~~-----~-----~~~~L~pGe~~~~~~~ 297 (312)
.++.++++|+|.++. ++.+|||||+... +..|+ .+||||||++ + +.++|+|||+++.+++
T Consensus 214 ~~~~~g~~l~v~t~~p~~~~~vyt~~~~~--------~~~~~~~~vclEp~~~~pda~n~~~~~~~~~L~PGe~~~~~~~ 285 (291)
T 3nre_A 214 EQPQEGYAIIMETTPPAPCYFIFVSDPAF--------DKGYAFDFFCLEPMSHAPDDHHRPEGGDLIALAPGESTTSEMS 285 (291)
T ss_dssp EEGGGTEEEEEEEESCCSEEEEEECCTTT--------CTTCCSCEEEEEEESSCTTGGGSGGGTTCEEECTTCEEEEEEE
T ss_pred EECCCCeEEEEEeCCCCceEEEEcCCCCC--------CCCccCCEEEEcCccCCCCCCcCCCCCCCEEECCCCEEEEEEE
Confidence 999999999999863 2248999986211 23455 8999999974 2 4799999999999999
Q ss_pred EEEEe
Q 021411 298 LLVVP 302 (312)
Q Consensus 298 i~~~~ 302 (312)
|++..
T Consensus 286 ~~~~~ 290 (291)
T 3nre_A 286 LRVEW 290 (291)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99875
No 9
>3mwx_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.45A {Bacillus subtilis}
Probab=100.00 E-value=1.8e-43 Score=327.13 Aligned_cols=261 Identities=18% Similarity=0.231 Sum_probs=199.3
Q ss_pred cCCCceEEEEeCCCCCEEEEE-ccCcEEEEEEeC-CCeeEEEeCCCCccCCCCcccccceEEcCcCCCCC----------
Q 021411 19 DWNGIDQVVLRSPHGPSAKVS-LYGGQITSWRNE-KGEELLFTSSKAIFKPPKAIRGGISTCFPQFGNCG---------- 86 (312)
Q Consensus 19 ~~~~~~~~~L~n~~g~~a~v~-~~Ga~l~s~~~~-~g~evL~~~~~~~~~~~~~irgG~p~lfP~~gr~~---------- 86 (312)
..+|++.++|+|+. ++|+|. ++||+|+||+.+ .|+++||.++........++++|+||||| +||+.
T Consensus 10 ~~~g~~~~~L~n~~-~~~~i~p~~GA~l~s~~~~~~g~~~l~~~~~~~~~~~~~~~~G~pv~~p-~nRi~~g~~~~~G~~ 87 (326)
T 3mwx_A 10 TYLGTPAIKAGNEH-LEMIVVPEWGSNVISLVDKTTNVQLLREPETAESFHDTPTLYGIPILFP-PNRISDGTFSFRGRT 87 (326)
T ss_dssp EETTEEEEEEEESS-EEEEEETTTTTEEEEEEETTTTEECBCCCSSHHHHHHCTTSSSCCEEBS-CSEEETTEEEETTEE
T ss_pred EECCeEEEEEECCC-EEEEEchhcCCEEEEEEecCCCceEEccCcChhHhhcCccccCceEcCC-CCcccCCEEEECCEE
Confidence 37899999999998 999999 799999999986 48999998764322223578899999999 69872
Q ss_pred -CCC---------CceeeecCCcEEecCCCCCCCCCCCCceEEEEEe--cCCCCCCCcCCceeEEEEEEEEecCCcEEEE
Q 021411 87 -SPE---------LHGFARNKLWIIDDNPPPMPPNDSDGKTCVDLLL--KPSEEDPKCWPYSFEYRLRVMLAADGGLTLI 154 (312)
Q Consensus 87 -~~~---------~HGfar~~~W~v~~~~~~~~~~~~~~~~~v~l~l--~~~~~~~~~~P~~f~l~~ty~L~~~~~L~i~ 154 (312)
+++ +|||+|++.|+|++.+. +++..+|+|++ .+.++++++|||+|+++++|+|. +++|+|+
T Consensus 88 y~l~~N~~~~~~~lHG~~~~~~W~v~~~~~------~~~~~~v~~~~~~~~~~~~~~g~P~~~~~~v~y~L~-~~~L~i~ 160 (326)
T 3mwx_A 88 YHFDINEKDKHNHLHGFLYHEKWNVVTTKQ------TDEGVIVETEIDLSELPHVQKQFPHHAVVRMTYTIK-ENTLFKH 160 (326)
T ss_dssp EECCCCBTTTTEEESBSCTTSCCEEEEEEE------ESSCEEEEEEEEGGGCHHHHHHSCSCEEEEEEEEEE-TTEEEEE
T ss_pred EEccCCCCCCCccccCCccCCceEEEEeec------cCCceEEEEEEEeCCCCccccCCCceEEEEEEEEEc-CCcEEEE
Confidence 344 69999999999987641 12234555544 44444556999999999999999 8999999
Q ss_pred EEEEeCCCCceeeeeeccceeecCCcCeeEEEcCCCCcee--e--ccccccceee------cCceeeecCCcceEecCC-
Q 021411 155 SRVRNINGKPFNFSFAYHTYLLVSDISEVRIEGLETLDYL--D--NLRQRERFTE------QGDAVTIESEMDRVYLRS- 223 (312)
Q Consensus 155 ~~v~N~~~~~~pf~~g~HpYF~~~~~~~~~~~~l~~~~~~--d--~l~~~~~~~~------~~~~~~~~~~~D~~y~~~- 223 (312)
++++|+++++|||++|+||||+++ +.+..+... +..++ | .+|+++.... ....+.+..++|++|...
T Consensus 161 ~~~~N~~~~~~~~~~~~H~yFnl~-~~~~~l~~~-a~~~~~~d~~~iptg~~~~~~~~~~~~~~~~~~~~~~D~~f~~~~ 238 (326)
T 3mwx_A 161 ATVMNKGKEAFPWGIGYHTTFIFP-AESSLFSLT-ADQQWELDERLLPTGKLMDVPYKEALHEGMDLRHKQLDDVFLSSY 238 (326)
T ss_dssp EEEEECSSSCEEECCEECCCEECC-TTTEEEEES-EEEEEEECTTSCEEEEEEECTTHHHHHHCBCCTTCCCEEEEEESH
T ss_pred EEEEECCCCceeeEEeeccccCCC-CCCEEEEEE-CCcEEEeCCccCCCCccccCcchhhcccCcccCCccccceeeecc
Confidence 999999999999999999999998 555444422 22333 2 2454432100 112233455789999764
Q ss_pred -----CCeEEEEeCCCCcEEEEEe-eCCCCEEEeCCccccccccCCCCCCCCCceEEecceee-------------CCCe
Q 021411 224 -----PNVIAVLDHERKRTFVLRK-EGLSDVVVWNPWEKRSKSMVDFGDEEYKQMLCVDAAAV-------------EKPI 284 (312)
Q Consensus 224 -----~~~~~l~d~~~~~~i~i~~-~~~~~~vvw~P~~~~~~~~~d~~~~~~~~~vCvEP~~~-------------~~~~ 284 (312)
...++|.++.++++|+|.. .++|+++||+|+. +++|||||||++ .+.+
T Consensus 239 ~~~~~~~~~~l~~~~~g~~l~~~~~~~~p~~~vwt~~~-------------~~~~vclEP~~~~~da~n~~~~~~~~g~~ 305 (326)
T 3mwx_A 239 QKRGGENQAVIYHQHAHISIIYKADEQFKHWVVYNADG-------------KQGYLCPEPYTWVTNAVNLDLPSSLTGLQ 305 (326)
T ss_dssp HHHCSCCEEEEEETTTTEEEEEEECTTCCEEEEECTTS-------------CSSEEEEEEESSCTTGGGCCSCHHHHCCE
T ss_pred ccCCCceEEEEEeCCCCEEEEEEeCCCCCEEEEECCCC-------------CCCEEEECCccCCCCccccCCCccccCCe
Confidence 2468899998999999986 5799999999863 257999999984 1468
Q ss_pred EeCCCCEEEEEEEEEEEec
Q 021411 285 TLKPGEEWTGRLQLLVVPS 303 (312)
Q Consensus 285 ~L~pGe~~~~~~~i~~~~~ 303 (312)
+|+|||+++.+++|+++..
T Consensus 306 ~L~PGe~~~~~~~i~~~~~ 324 (326)
T 3mwx_A 306 VLEPGEETTAKSSITIELN 324 (326)
T ss_dssp EECTTCEEEEEEEEEEEEC
T ss_pred EECCCCeEEEEEEEEEEec
Confidence 9999999999999999753
No 10
>1yga_A Hypothetical 37.9 kDa protein in BIO3-HXT17 intergenic region; aldose_1_epimerase, sugar metabolism, predicted, structural genomics; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-40 Score=308.93 Aligned_cols=264 Identities=14% Similarity=0.168 Sum_probs=195.6
Q ss_pred cCCCceEEEEeCCCCCEEEEEccCcEEEEEEeCCCeeEEE-eCCCCccCCCCcccccceEEcCcCCCCC-----------
Q 021411 19 DWNGIDQVVLRSPHGPSAKVSLYGGQITSWRNEKGEELLF-TSSKAIFKPPKAIRGGISTCFPQFGNCG----------- 86 (312)
Q Consensus 19 ~~~~~~~~~L~n~~g~~a~v~~~Ga~l~s~~~~~g~evL~-~~~~~~~~~~~~irgG~p~lfP~~gr~~----------- 86 (312)
+.+++..++|+|+++++|+|..+||+|+||+.+ |+|+|| .++.+.|....+++|+ +++||+||+.
T Consensus 6 ~~~~~~~~~l~n~~~~~~~i~~~GA~l~s~~~~-g~~vl~~~~~~~~y~~~~~~~G~--~l~p~~nRi~~g~f~~~G~~y 82 (342)
T 1yga_A 6 GDNKYGVITIGDEKKFQATIAPLGATLVDLKVN-GQSVVQGYSNVQDYLTDGNMMGA--TVGRYANRIAKGVFSLDDGPH 82 (342)
T ss_dssp -CCTTCCEEEEETTTEEEEEETBTTEEEEEEET-TEECBCCCSSGGGGTTCSSCTTC--EECSBCSEEGGGEEEETTEEE
T ss_pred CCceEEEEEEECCCCEEEEEECCCCEEEEEEEC-CeeEEecCCChHHhccCCCeEcc--EECCCCCceeCCEEEECCEEE
Confidence 456788999999766999999999999999985 799886 4455556555567754 5679999983
Q ss_pred CC-------CCceee---ecCCcEEecCCCCCCCCCCCCceEEEEEecCC--CCCCCcCCceeEEEEEEEEec-CCcEEE
Q 021411 87 SP-------ELHGFA---RNKLWIIDDNPPPMPPNDSDGKTCVDLLLKPS--EEDPKCWPYSFEYRLRVMLAA-DGGLTL 153 (312)
Q Consensus 87 ~~-------~~HGfa---r~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~--~~~~~~~P~~f~l~~ty~L~~-~~~L~i 153 (312)
++ ++|||+ |++.|+++.... ++.+..+|+|+|.+. +++++.|||+|+++++|+|.+ +++|+|
T Consensus 83 ~l~~n~~~~~lHG~~~g~~~~~W~v~~~~~-----~~~~~~~v~l~l~~~~~~~g~~~yP~~~~~~vty~L~~~~~~L~i 157 (342)
T 1yga_A 83 KLTVNNCGNTNHSSISSLNLKQYKASPVEN-----PSKGVYVVEFKLLDDHTQPNPNEFPGDLEVTVKYTLNVAEMTLDM 157 (342)
T ss_dssp ECCCCBTTBEETTGGGCGGGSBCEECCCEE-----EETTEEEEEEEEEECSSSSSCCCSSSEEEEEEEEEEETTTTEEEE
T ss_pred EcCCCCCCcccCCCccccCcceeeeEEeec-----cCCCCCEEEEEEECCcccCCCcCCCeEEEEEEEEEEeCCCCEEEE
Confidence 23 469999 699999976420 000256688888753 344555999999999999982 389999
Q ss_pred EEEEEeCCCCceeeeeeccceeecCC------cCeeEEEcCCCCcee--ec---cccccceeecCceeeec------C--
Q 021411 154 ISRVRNINGKPFNFSFAYHTYLLVSD------ISEVRIEGLETLDYL--DN---LRQRERFTEQGDAVTIE------S-- 214 (312)
Q Consensus 154 ~~~v~N~~~~~~pf~~g~HpYF~~~~------~~~~~~~~l~~~~~~--d~---l~~~~~~~~~~~~~~~~------~-- 214 (312)
+|+++|+++++|||++|+||||+++. +.+..|. +.+..|+ |. +|+++........++|. .
T Consensus 158 ~~~~~N~~d~~~p~~~~~H~YFnl~~~~~~~~i~~~~l~-l~a~~~~~~d~~~~iPtg~~~~v~~~~~df~~~~~l~~~~ 236 (342)
T 1yga_A 158 EYQAQLVRGDATPINMTNHSYFNLNKVKSEKSIRGTEVK-VCSNKSLEVTEGALLPTGKIIERNIATFDSTKPTVLHEDT 236 (342)
T ss_dssp EEEEEEEESSEEECBCEECCCBCTTTTTCTTCCTTEEEE-ESCCEEEEECTTTCCEEEEEEECSCCBTTCSSCEEECSSC
T ss_pred EEEEEeCCCCceEEeeeccceEEcCCCCCCCcccceEEE-EeCCeEEEECCCCCCcCCCeEecCCCcccccCCeecCccc
Confidence 99999999999999999999999982 3455666 5555665 33 55554211122233332 2
Q ss_pred -CcceEecCCC----------------CeEEEEeCCCCcEEEEEeeCCCCEEEeCCccccccccCCCCCCCC--CceEEe
Q 021411 215 -EMDRVYLRSP----------------NVIAVLDHERKRTFVLRKEGLSDVVVWNPWEKRSKSMVDFGDEEY--KQMLCV 275 (312)
Q Consensus 215 -~~D~~y~~~~----------------~~~~l~d~~~~~~i~i~~~~~~~~vvw~P~~~~~~~~~d~~~~~~--~~~vCv 275 (312)
.+|++|.... ..++|.++.+++.|+|.++ +|.+|||||+. | +++| +.||||
T Consensus 237 ~~~D~~f~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~g~~l~v~~~-~p~~~vyt~~~-----~----~~~y~~~~~vcl 306 (342)
T 1yga_A 237 PVFDCTFIIDANKDLKTTDSVSVNKLVPVFKAYHPESHIKFEVSTT-EPTVHLYTGDN-----L----CGKFVPRSGFAV 306 (342)
T ss_dssp CCCEEEEECTTTTTCCSSBCTTTSCCEEEEEEECTTTCCEEEEEES-SSEEEEECCTT-----C----CTTSCTTSCBEE
T ss_pred CCCCcEEEeCCCccccccccccccccceEEEEEeCCCCeEEEEEeC-CCEEEEECCCC-----c----cccCCCCCEEEE
Confidence 6999997542 2577888889999999987 99999999852 1 2234 689999
Q ss_pred cceeeC---------CCeEeCCCCEEEEEEEEEEE
Q 021411 276 DAAAVE---------KPITLKPGEEWTGRLQLLVV 301 (312)
Q Consensus 276 EP~~~~---------~~~~L~pGe~~~~~~~i~~~ 301 (312)
||+... +.++|+|||+++.+++|++.
T Consensus 307 Ep~~~pda~n~~~~~~~~~L~pGe~~~~~~~~~f~ 341 (342)
T 1yga_A 307 QQGRYVDAINRDEWRGCVLLKRGEVYTSKTQYKFD 341 (342)
T ss_dssp EEESCSSGGGCHHHHGGGEEETTCCEEEEEEEEEE
T ss_pred ECCCCCCcccCCCCCCCeEECCCCEEEEEEEEEEE
Confidence 998531 23899999999999999874
No 11
>1snz_A Aldose 1-epimerase; mutarotase, galactosemia, isomerase; 2.20A {Homo sapiens} SCOP: b.30.5.4 PDB: 1so0_A*
Probab=100.00 E-value=1.8e-38 Score=295.59 Aligned_cols=261 Identities=16% Similarity=0.223 Sum_probs=189.9
Q ss_pred CCceEEEEeCCCCCEEEEEccCcEEEEEEeC--CCe--eEEEe-CCCCccCCCCcccccceEEcCcCCCCC---------
Q 021411 21 NGIDQVVLRSPHGPSAKVSLYGGQITSWRNE--KGE--ELLFT-SSKAIFKPPKAIRGGISTCFPQFGNCG--------- 86 (312)
Q Consensus 21 ~~~~~~~L~n~~g~~a~v~~~Ga~l~s~~~~--~g~--evL~~-~~~~~~~~~~~irgG~p~lfP~~gr~~--------- 86 (312)
+++..++|+|+ +++|+|..+||+|+||+.+ +|+ ++||. ++.+.+....+++| . +||||+||+.
T Consensus 19 ~~~~~~~L~n~-~~~~~i~~~GA~l~s~~~~~~~G~~~~vv~g~~~~~~y~~~~~~~G-~-~l~p~~nRi~~g~f~~~G~ 95 (344)
T 1snz_A 19 GTVEKFQLQSD-LLRVDIISWGCTITALEVKDRQGRASDVVLGFAELEGYLQKQPYFG-A-VIGRVANRIAKGTFKVDGK 95 (344)
T ss_dssp EEEEEEEEECS-SCEEEEETBTTEEEEEEEECTTSCEEECBCCCSSHHHHHSSCSCTT-C-EECSBCSEEGGGEEEETTE
T ss_pred cEEEEEEEEcC-CEEEEEecCCcEEEEEEecCCCCCEeeEEECCCChHHHhhCCCcee-e-EecCcCCcccCCEEEECCE
Confidence 34789999999 4999999999999999974 354 88874 33333434455664 3 7999999983
Q ss_pred --CC-------CCceeee---cCCcEEecCCCCCCCCCCCCceEEEEEecCCCCCCCcCCceeEEEEEEEEecCCcEEEE
Q 021411 87 --SP-------ELHGFAR---NKLWIIDDNPPPMPPNDSDGKTCVDLLLKPSEEDPKCWPYSFEYRLRVMLAADGGLTLI 154 (312)
Q Consensus 87 --~~-------~~HGfar---~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~ty~L~~~~~L~i~ 154 (312)
++ ++|||+| ++.|++++.+ .+|+|+|.+.+ ++++|||+|+++++|+|+ +++|+|+
T Consensus 96 ~y~L~~N~~~~~lHG~~~g~~~~~W~v~~~~-----------~~v~l~l~~~~-~~~gyP~~~~~~vty~L~-~~~L~i~ 162 (344)
T 1snz_A 96 EYHLAINKEPNSLHGGVRGFDKVLWTPRVLS-----------NGVQFSRISPD-GEEGYPGELKVWVTYTLD-GGELIVN 162 (344)
T ss_dssp EEECCCTBTTBEETTSSSCGGGSBCEEEEET-----------TEEEEEEEECT-TGGGCCSCEEEEEEEEEE-TTEEEEE
T ss_pred EEECCCCCCCcccCCCccccccceeeEEEeC-----------CEEEEEEECCC-cCCCCCEEEEEEEEEEEc-CCEEEEE
Confidence 23 4999995 8999997532 24778887644 678999999999999999 6799999
Q ss_pred EEEEeCCCCceeeeeeccceeecCC-----cCeeEEEcCCCCcee----eccccccceeecCceeeecC-----------
Q 021411 155 SRVRNINGKPFNFSFAYHTYLLVSD-----ISEVRIEGLETLDYL----DNLRQRERFTEQGDAVTIES----------- 214 (312)
Q Consensus 155 ~~v~N~~~~~~pf~~g~HpYF~~~~-----~~~~~~~~l~~~~~~----d~l~~~~~~~~~~~~~~~~~----------- 214 (312)
|+++| +++|||++|+||||+++. +.+..+. +.+..|+ +.+|+++.....+..++|..
T Consensus 163 ~~a~~--d~~~p~~~~~H~YFnl~~~~~~~i~~~~L~-i~a~~~~~~d~~~iPtg~~~~v~~t~~df~~~~~l~~~~~~~ 239 (344)
T 1snz_A 163 YRAQA--SQATPVNLTNHSYFNLAGQASPNINDHEVT-IEADTYLPVDETLIPTGEVAPVQGTAFDLRKPVELGKHLQDF 239 (344)
T ss_dssp EEEEE--SSCEECBCEECCCBCTTCTTCSCCTTCEEE-ECEEEECCBCTTSCBCSCCEECTTSTTCCSSCEEHHHHHHHT
T ss_pred EEEEe--CCceEEeccccceEecCCCCCCcccCEEEE-EECCeEEEeCCCCcccCceecCCCCcccccCCcCcChhhccc
Confidence 99987 899999999999999984 3343444 3333444 23555542211223344432
Q ss_pred ---CcceEecCCC-----CeEEEEeCCCCcEEEEEeeCCCCEEEeCCccccccccCCCCCCCC--CceEEecceeeC---
Q 021411 215 ---EMDRVYLRSP-----NVIAVLDHERKRTFVLRKEGLSDVVVWNPWEKRSKSMVDFGDEEY--KQMLCVDAAAVE--- 281 (312)
Q Consensus 215 ---~~D~~y~~~~-----~~~~l~d~~~~~~i~i~~~~~~~~vvw~P~~~~~~~~~d~~~~~~--~~~vCvEP~~~~--- 281 (312)
++|++|.... ..++|.++.+++.|+|.++ +|.+|||||..-. ..+.++.+..| +.|||||||...
T Consensus 240 ~~~g~D~~f~~~~~~~~~~~a~l~~~~sg~~l~v~t~-~p~~~vyt~~~~~-~~~~~~~~~~y~~~~~vclEp~~~pda~ 317 (344)
T 1snz_A 240 HLNGFDHNFCLKGSKEKHFCARVHHAASGRVLEVYTT-QPGVQFYTGNFLD-GTLKGKNGAVYPKHSGFCLETQNWPDAV 317 (344)
T ss_dssp TCCCCEEEEEECCCSSCEEEEEEEETTTTEEEEEEES-SSEEEEECCTTCE-EEEECGGGCEEETTSCBEEEEESCTTGG
T ss_pred ccCCCCeEEEccCCCCCceEEEEEeCCCCcEEEEEeC-CCeEEEECCCCCC-ccccCCCCcccCCCCEEEEeCcCCCCcc
Confidence 4899996532 2578889999999999987 9999999983111 01222222233 589999999641
Q ss_pred -----CCeEeCCCCEEEEEEEEEEEe
Q 021411 282 -----KPITLKPGEEWTGRLQLLVVP 302 (312)
Q Consensus 282 -----~~~~L~pGe~~~~~~~i~~~~ 302 (312)
+.++|+|||+++.+++|++..
T Consensus 318 n~~~~~~~~L~pGe~~~~~~~~~f~~ 343 (344)
T 1snz_A 318 NQPRFPPVLLRPGEEYDHTTWFKFSV 343 (344)
T ss_dssp GCTTSCCCEECTTSCEEEEEEEEEEE
T ss_pred cCCCCCCeEECCCCEEEEEEEEEEEe
Confidence 368999999999999999863
No 12
>1nsx_A Galactose mutarotase; epimerase, galactose metabolism, isomerase; HET: GAL; 1.75A {Lactococcus lactis} SCOP: b.30.5.4 PDB: 1nsz_A* 1mmu_A* 1l7k_A* 1l7j_A* 1mmx_A* 1mmy_A* 1mmz_A* 1mn0_A* 1ns0_A* 1ns4_A* 1ns8_A* 1nsr_A* 1nsu_A* 1nsv_A* 1ns7_A* 1ns2_A* 1nsm_A* 1nss_A*
Probab=100.00 E-value=1.3e-36 Score=283.01 Aligned_cols=261 Identities=14% Similarity=0.239 Sum_probs=188.0
Q ss_pred CceEEEEeCCCCCEEEEEccCcEEEEEEeCCCeeEEEeCC-CCccCCCCcccccceEEcCcCCCCC-----------CCC
Q 021411 22 GIDQVVLRSPHGPSAKVSLYGGQITSWRNEKGEELLFTSS-KAIFKPPKAIRGGISTCFPQFGNCG-----------SPE 89 (312)
Q Consensus 22 ~~~~~~L~n~~g~~a~v~~~Ga~l~s~~~~~g~evL~~~~-~~~~~~~~~irgG~p~lfP~~gr~~-----------~~~ 89 (312)
.+..++|+|++|++|+|..+||.|+||+. +|+++||..+ .+.|....+.+| ++|+||.||+. +++
T Consensus 11 ~~~~~tL~n~~~~~v~i~~~GA~l~sl~~-~G~~vvlg~~~~~~y~~~~~~~G--~~lgp~anRI~~g~f~~~G~~y~L~ 87 (347)
T 1nsx_A 11 GSDLISLTNKAGVTISFTNLGARIVDWQK-DGKHLILGFDSAKEYLEKDAYPG--ATVGPTAGRIKDGLVKISGKDYILN 87 (347)
T ss_dssp TEEEEEEECTTSCEEEEETBTTEEEEEEE-TTEESBCCCSSHHHHHHTCSCTT--CEECSBCSEEGGGEEEETTEEEECC
T ss_pred eeEEEEEECCCceEEEEEccCcEEEEEEE-CCeEEEEeCCCHHHHhhCCCeEe--eEEcccCCcccCCEEEECCEEEEcc
Confidence 67899999986699999999999999994 6888888644 345543445554 79999999983 344
Q ss_pred -------Cceee---ecCCcEEecCCCCCCCCCCCCceEEEEEecCCCCCCCcCCceeEEEEEEEEecCCcEEEEEEEEe
Q 021411 90 -------LHGFA---RNKLWIIDDNPPPMPPNDSDGKTCVDLLLKPSEEDPKCWPYSFEYRLRVMLAADGGLTLISRVRN 159 (312)
Q Consensus 90 -------~HGfa---r~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~ty~L~~~~~L~i~~~v~N 159 (312)
+||++ |++.|+++..+. +...+|+|++.+. +++++|||+|+++++|+|+++++|+|+++++
T Consensus 88 ~N~~~n~lHGg~~g~~~~~W~v~~~~~-------~~~~~v~l~l~s~-d~~~gyPg~~~~~vtY~L~~~~~L~i~~~a~- 158 (347)
T 1nsx_A 88 QNEGPQTLHGGEESIHTKLWTYEVTDL-------GAEVQVKFSLVSN-DGTNGYPGKIEMSVTHSFDDDNKWKIHYEAI- 158 (347)
T ss_dssp CCBTTBEETTSTTCGGGSBCEEEEEEC-------SSEEEEEEEEEEC-TTGGGCCSCEEEEEEEEEETTSEEEEEEEEE-
T ss_pred CCCCCcccCCCCcccccceEEEEEccC-------CcceEEEEEEECC-CccCCCCeEEEEEEEEEECCCCeEEEEEEEE-
Confidence 99998 999999986541 1123789999865 5789999999999999998458999999996
Q ss_pred CCCCceeeeeeccceeecCC-----cCeeEEEcCCCCcee--e--c-cccccceeecCceeeec----------------
Q 021411 160 INGKPFNFSFAYHTYLLVSD-----ISEVRIEGLETLDYL--D--N-LRQRERFTEQGDAVTIE---------------- 213 (312)
Q Consensus 160 ~~~~~~pf~~g~HpYF~~~~-----~~~~~~~~l~~~~~~--d--~-l~~~~~~~~~~~~~~~~---------------- 213 (312)
++++|||++|+||||+++. +.+..+. +....|+ | . +|+++.....+..++|.
T Consensus 159 -~d~~tp~nlg~HpYFnl~g~~~~~i~~~~L~-i~a~~~~~~d~~~~iPtG~~~~v~gt~~df~~~~~l~~~~~~~~~~~ 236 (347)
T 1nsx_A 159 -SDKDTVFNPTGNVYFNLNGDASESVENHGLR-LAASRFVPLKDQTEIVRGDIVDIKNTDLDFRQEKQLSNAFNSNMEQV 236 (347)
T ss_dssp -ESSCEECBCEECCEECTTSSTTSCGGGSEEE-ECEEEECCBCSTTCCBCSCCEECTTSTTCCSSCEEHHHHHHCCCHHH
T ss_pred -cCCCeEEeeeccceEecCCCCCCceeceEEE-EECCeEEEECCCCcCcCCCeEecCCCcccccCCcccchhhccchhhh
Confidence 8999999999999999984 2332332 1122332 3 3 66654211111112221
Q ss_pred ---CCcceEecCCC-----CeEEEEeCCCCcEEEEEeeCCCCEEEeCCccccccccCC---CCCCC--CCceEEecceee
Q 021411 214 ---SEMDRVYLRSP-----NVIAVLDHERKRTFVLRKEGLSDVVVWNPWEKRSKSMVD---FGDEE--YKQMLCVDAAAV 280 (312)
Q Consensus 214 ---~~~D~~y~~~~-----~~~~l~d~~~~~~i~i~~~~~~~~vvw~P~~~~~~~~~d---~~~~~--~~~~vCvEP~~~ 280 (312)
+++|++|.... ..++|.+ +++.|+|.++ +|.++||++..- .+ ..+.. .+.+||||||+.
T Consensus 237 ~~~~g~D~~f~l~~~~~~~~~a~l~~--sg~~l~v~t~-~p~lqvyt~~~~-----~~g~~~~g~~~~~~~~vclEpq~~ 308 (347)
T 1nsx_A 237 QLVKGIDHPFLLDQLGLDKEQARLTL--DDTSISVFTD-QPSIVIFTANFG-----DLGTLYHEKKQVHHGGITFECQVS 308 (347)
T ss_dssp HHHTSCEEEEEESSCBTTSCCEEEEE--TTEEEEEEES-SSEEEEECCCCT-----TCCCEETTEECCTTCCEECEEESC
T ss_pred cccCCCCEEEEecCCCCceEEEEEEe--CCCEEEEEeC-CCEEEEECCCCC-----ccccccCCcccCCcCEEEEeccCC
Confidence 25899996432 3477776 7899999986 999999997411 00 00111 245699999995
Q ss_pred C--------CCeEeCCCCEEEEEEEEEEEecC
Q 021411 281 E--------KPITLKPGEEWTGRLQLLVVPSS 304 (312)
Q Consensus 281 ~--------~~~~L~pGe~~~~~~~i~~~~~~ 304 (312)
. +.++|+|||+++.++++++...+
T Consensus 309 pDa~n~~~~~~~~L~pGe~~~~~~~~~f~~~~ 340 (347)
T 1nsx_A 309 PGSEQIPELGDISLKAGEKYQATTIYSLHTKL 340 (347)
T ss_dssp TTTTTCGGGCCCEECTTCEEEEEEEEEEEECC
T ss_pred CCccCCCCCCCeEECCCCEEEEEEEEEEEecc
Confidence 1 46899999999999999987543
No 13
>1lur_A Aldose 1-epimerase; vitamin B12, methyltransferase, structural genomics, structure-based function assignment, decarboxylase, PSI; 1.85A {Caenorhabditis elegans} SCOP: b.30.5.4
Probab=100.00 E-value=1.1e-36 Score=283.03 Aligned_cols=261 Identities=12% Similarity=0.172 Sum_probs=186.8
Q ss_pred CCCceEEEEeCCCCCEEEEEccCcEEEEEEeC--CC--eeEEEeCCC-C-ccCCCCcccccceEEcCcCCCCC-------
Q 021411 20 WNGIDQVVLRSPHGPSAKVSLYGGQITSWRNE--KG--EELLFTSSK-A-IFKPPKAIRGGISTCFPQFGNCG------- 86 (312)
Q Consensus 20 ~~~~~~~~L~n~~g~~a~v~~~Ga~l~s~~~~--~g--~evL~~~~~-~-~~~~~~~irgG~p~lfP~~gr~~------- 86 (312)
...+..++|.++ +++|+|..+||.|+||+.+ +| +|+||..+. + ++. ..+++| ++++||.||+.
T Consensus 10 ~~~~~~~~L~~~-~~~~~i~~~GA~l~sl~~~d~~G~~~dvvl~~~~~~~y~~-~~~~~G--~~lgp~anRI~~g~f~~~ 85 (339)
T 1lur_A 10 MASGFIEIANKQ-GLTATLLPFGATLAKLTFPDKNGKNQDLVLGFDTIDEFEK-DAASIG--KTVGRVANRIKNSTLHFD 85 (339)
T ss_dssp -CCCCEEEECSS-SCEEEEETBTTEEEEEEEECTTSCEEECBCCCSSHHHHHH-CSSCTT--CEECSBCSEEGGGEEEET
T ss_pred cceeEEEEEeCC-CEEEEEecCCcEEEEEEEECCCCCEeEEEEcCCChHHhcc-CCCccc--cEecCcCCeecCCEEEEC
Confidence 456788999544 5999999999999999983 46 799987643 3 444 334553 56889999983
Q ss_pred ----CCC-------Cceee---ecCCcEEecCCCCCCCCCCCCceEEEEEecCCCCCCCcCCceeEEEEEEEEecCCcEE
Q 021411 87 ----SPE-------LHGFA---RNKLWIIDDNPPPMPPNDSDGKTCVDLLLKPSEEDPKCWPYSFEYRLRVMLAADGGLT 152 (312)
Q Consensus 87 ----~~~-------~HGfa---r~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~ty~L~~~~~L~ 152 (312)
+++ +|||+ +++.|++++.+ ..+|+|++.+.+ +.++|||+|+++++|+|+++++|+
T Consensus 86 G~~y~L~~N~~~n~lHGg~~g~~~~~W~v~~~~----------~~~v~l~l~s~d-~~~gyPg~~~~~vtY~L~~~~~L~ 154 (339)
T 1lur_A 86 GKQYTMTPNNGPHYLHGGPNGLGYRKWEVVRHA----------PESVSFSVRANE-QDDGLPGDAKIDVTYTVNDRNQLI 154 (339)
T ss_dssp TEEEECCCSBTTBEETTCTTSGGGSBCEEEEEE----------TTEEEEEEEEEH-HHHSSSSEEEEEEEEEECTTSEEE
T ss_pred CEEEECCCCCCCcccCCCCcccccceeeEEEcc----------CCEEEEEEECCC-cCCCCCeEEEEEEEEEECCCCeEE
Confidence 344 99999 58999998654 346888887544 568999999999999998458999
Q ss_pred EEEEEEeCCCCceeeeeeccceeecCC---cCeeEEEcCCCCcee--e--ccccccceeecC------ceeeecC-----
Q 021411 153 LISRVRNINGKPFNFSFAYHTYLLVSD---ISEVRIEGLETLDYL--D--NLRQRERFTEQG------DAVTIES----- 214 (312)
Q Consensus 153 i~~~v~N~~~~~~pf~~g~HpYF~~~~---~~~~~~~~l~~~~~~--d--~l~~~~~~~~~~------~~~~~~~----- 214 (312)
|++++ +++++|||++|+||||+++. +.+..+. +.+..|+ | .+|+++.....+ ....+..
T Consensus 155 i~~~a--~~d~~tp~~lg~HpYFnl~~~~~i~~~~L~-i~a~~~~~~d~~~iPtg~~~~v~~t~~Df~~~~~l~~~~~~~ 231 (339)
T 1lur_A 155 IEHHA--TCDTPGLLALTNHAYWNLDGSDTVAEHFLE-MEADEFVEVDDTFCPTGAIRSVTDTGFDFRSGKQLKESGKDA 231 (339)
T ss_dssp EEEEE--ECSSCEECBCEECCEECSSCCSCSTTCEEE-ECEEEEEEECTTSCEEEEEEECTTSTTCCTTCEETTCSCCCS
T ss_pred EEEEE--eCCCCeEEeeeccceEECCCCCcccCEEEE-EECCEEEEeCCCCccCCCEEccCCCcccccCceecCchhccc
Confidence 99999 68999999999999999985 3443443 2333443 2 345543211111 1222222
Q ss_pred ----CcceEecCC---C-----CeEEEEeCCCCcEEEEEeeCCCCEEEeCCccccccccCCCCCCC--CCceEEecceee
Q 021411 215 ----EMDRVYLRS---P-----NVIAVLDHERKRTFVLRKEGLSDVVVWNPWEKRSKSMVDFGDEE--YKQMLCVDAAAV 280 (312)
Q Consensus 215 ----~~D~~y~~~---~-----~~~~l~d~~~~~~i~i~~~~~~~~vvw~P~~~~~~~~~d~~~~~--~~~~vCvEP~~~ 280 (312)
++|++|... . ..++|.++.+++.|+|.++ +|.++||||+.- . .....+.. .+.|||||||+.
T Consensus 232 ~~~~~~D~~f~~~~~~~~~~~~~~a~l~~~~sg~~l~v~t~-~p~~~vyt~~~~-~--~~g~~g~~y~~~~~vclEp~~~ 307 (339)
T 1lur_A 232 EELLDLDNDLVITKKTPPSTPSTYLRFWSEKSGIELSITTS-YPVIHLYASKFL-D--CKGKKGEHYKANKALAIEPQFH 307 (339)
T ss_dssp SCCCCCEEEEEECCCCC----CCCEEEECTTTCEEEEEEES-SSEEEEECCTTC-C--EECGGGCEECTTCCEEEEEESC
T ss_pred ccCCCCccEEEeCCCCCCcccceEEEEEECCCCcEEEEEeC-CCEEEEECCCCc-c--ccCCCCcccCCCCEEEEeccCC
Confidence 789999642 2 3578889999999999986 999999998521 0 00000111 246999999985
Q ss_pred C--------CCeEeCCCCEEEEEEEEEEEe
Q 021411 281 E--------KPITLKPGEEWTGRLQLLVVP 302 (312)
Q Consensus 281 ~--------~~~~L~pGe~~~~~~~i~~~~ 302 (312)
. +.++|+|||+++.+++|++..
T Consensus 308 pDa~n~~~~~~~~L~pGe~~~~~~~~~f~~ 337 (339)
T 1lur_A 308 SAAPNFDHFPDVSLRPGDHYCQEIVYTFSH 337 (339)
T ss_dssp TTGGGCTTSCCCEECTTCCEEEEEEEEEEE
T ss_pred CCccCCCCCCCeEECCCCEEEEEEEEEEEE
Confidence 1 358999999999999999864
No 14
>3imh_A Galactose-1-epimerase; structural genomics, PSI-2, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.76A {Lactobacillus acidophilus}
Probab=100.00 E-value=3.5e-34 Score=264.74 Aligned_cols=261 Identities=16% Similarity=0.237 Sum_probs=186.0
Q ss_pred CceEEEEeCCCCCEEEEEccCcEEEEEEeCCCeeEEEeCC-CCccCCCCcccccceEEcCcCCCCC-----------CC-
Q 021411 22 GIDQVVLRSPHGPSAKVSLYGGQITSWRNEKGEELLFTSS-KAIFKPPKAIRGGISTCFPQFGNCG-----------SP- 88 (312)
Q Consensus 22 ~~~~~~L~n~~g~~a~v~~~Ga~l~s~~~~~g~evL~~~~-~~~~~~~~~irgG~p~lfP~~gr~~-----------~~- 88 (312)
.+..++|+|++|++|+|..+||.|+||+.+ ++||+|..+ .+.|....+.. | ++|+||.||+. ++
T Consensus 17 ~v~~~tL~n~~g~~v~i~~~GA~l~sl~~~-~~dvvlg~~~~~~y~~~~~~~-G-~~lgp~anRI~~g~f~~~G~~y~L~ 93 (338)
T 3imh_A 17 DLCEITLENDAGMAVKVLNYGATLEKVLLD-GENMILSLNSPEDYSKERNFL-G-GTVGRIAGRVRAGQWKHGNEIHQLP 93 (338)
T ss_dssp EEEEEEEECSSSEEEEEETBTTEEEEEEET-TEECBCCCSSGGGGGTSCCCT-T-CEECSBCSEEGGGEEEETTEEEECC
T ss_pred EEEEEEEECCCcEEEEEecCCcEEEEEEEC-CEEEEecCCChHHhccCCCeE-e-eEEEeeCCEecCCEEEECCEEEECC
Confidence 367899999978999999999999999985 699998654 23333333444 4 58999999983 33
Q ss_pred ------CCceee--ecCCcEEecCCCCCCCCCCCCceEEEEEecCCCCCCCcCCceeEEEEEEEEecCCcEEEEEEEEeC
Q 021411 89 ------ELHGFA--RNKLWIIDDNPPPMPPNDSDGKTCVDLLLKPSEEDPKCWPYSFEYRLRVMLAADGGLTLISRVRNI 160 (312)
Q Consensus 89 ------~~HGfa--r~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~ty~L~~~~~L~i~~~v~N~ 160 (312)
.+||++ +.+.|++.... +.+..+|+|++.+. ++.++|||+|+++++|+|+++++|+|+++++
T Consensus 94 ~N~g~n~LHGg~g~~~~~W~v~~~~-------~~~~~~v~l~l~s~-d~~~gyPg~~~~~vtY~L~~~~~L~i~~~a~-- 163 (338)
T 3imh_A 94 LNDGDNHIHGGIGTDMHVWDFRPSC-------DSEHARVDLTLFDP-DGNNDYPGNLKLHARYELDNENNLHYLLEAV-- 163 (338)
T ss_dssp CCBTTBEETTSSCGGGSBCEEEEEE-------CSSEEEEEEEEEEC-TTGGGCCSCEEEEEEEEEETTSEEEEEEEEE--
T ss_pred CCCCCcCCCCCCCcCCceEEEEeee-------ecCCCEEEEEEECC-ccccCCCeEEEEEEEEEEecCCeEEEEEEEe--
Confidence 459998 78999994321 12367899999864 5678999999999999999336899999997
Q ss_pred CCCceeeeeeccceeecCC-cCeeEEEcCCCCcee----eccccccceeecCceeeec-------------------CCc
Q 021411 161 NGKPFNFSFAYHTYLLVSD-ISEVRIEGLETLDYL----DNLRQRERFTEQGDAVTIE-------------------SEM 216 (312)
Q Consensus 161 ~~~~~pf~~g~HpYF~~~~-~~~~~~~~l~~~~~~----d~l~~~~~~~~~~~~~~~~-------------------~~~ 216 (312)
++++|||++|+||||+++. +.+..+. +....|+ +.+|+++.....+..++|. .++
T Consensus 164 ~d~~tp~nlg~HpYFnL~g~i~~~~L~-i~a~~~~~~d~~~iPTG~~~~v~gt~~DFr~~~~ig~~~~~~~~q~~~~~g~ 242 (338)
T 3imh_A 164 SDKLTIFNPVNHTYFNLGERAEDLNLQ-MNADYYLPVDEAGLPDRGMAEVAGTAFDFRKTKRIGDALNSDDSQIKLRNGL 242 (338)
T ss_dssp ESSSEECBCEECCEECTTSCGGGCEEE-ECEEEECCBCTTSSBSSCCEECTTSTTCCSSCEEHHHHHTSCCHHHHHHTSC
T ss_pred cCCCeEEEEeeCCEEeCCCCcCCeEEE-EEcCcEEEeCCccCCcCceecCCCCcccCCCCeEcchhhhccchhhcccCCC
Confidence 8999999999999999984 4343332 1222332 2466665321122222221 369
Q ss_pred ceEecCCC--CeEEEEeCCCCcEEEEEeeCCCCEEEeCCccccccccCCCCCCC--CCceEEecceeeC------CCeEe
Q 021411 217 DRVYLRSP--NVIAVLDHERKRTFVLRKEGLSDVVVWNPWEKRSKSMVDFGDEE--YKQMLCVDAAAVE------KPITL 286 (312)
Q Consensus 217 D~~y~~~~--~~~~l~d~~~~~~i~i~~~~~~~~vvw~P~~~~~~~~~d~~~~~--~~~~vCvEP~~~~------~~~~L 286 (312)
|++|.... ..+++.+ ++++|+|.+ +.|.++||++...... . .... .+..||||||+.. ..++|
T Consensus 243 Dh~f~l~~~~~~a~l~~--sg~~l~v~t-~~p~~q~YTgn~l~~~---g-~g~~~~~~~g~clE~q~~P~n~~~f~~~vL 315 (338)
T 3imh_A 243 DHPFILNGNNPAALLSS--NKHRLIVKT-NAPALVLYAGNHFNHT---G-IVNNIGQYDGITFEAQCPPAEGNDLGQITL 315 (338)
T ss_dssp EEEEEECSCSCSEEEEC--SSEEEEEEE-SSSEEEEECCTTCCSB---T-TBTTCCTTSCEECEEESCCCSSSCCGGGEE
T ss_pred CCceeecCCceEEEEEC--CCeEEEEEe-CCCEEEEeCCCCcCCC---C-CCcccCccCEEEEEccCCCCCCCCCCCeEE
Confidence 99997532 2466654 799999987 4899999997422110 0 0111 2458999999862 24899
Q ss_pred CCCCEEEEEEEEEEEec
Q 021411 287 KPGEEWTGRLQLLVVPS 303 (312)
Q Consensus 287 ~pGe~~~~~~~i~~~~~ 303 (312)
+|||+++.++.++++..
T Consensus 316 ~pGe~y~~~t~y~f~~~ 332 (338)
T 3imh_A 316 LPFEKFKRTVDWKFEEG 332 (338)
T ss_dssp CTTCCEEEEEEEEEEEC
T ss_pred CCCCEEEEEEEEEECCc
Confidence 99999999999999864
No 15
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=100.00 E-value=4.3e-34 Score=289.00 Aligned_cols=261 Identities=12% Similarity=0.160 Sum_probs=190.4
Q ss_pred CCCceEEEEeCCCCCEEEEEccCcEEEEEEeCCCeeEEEeCC--CCccCCCCcccccceEEcCcCCCCC-----------
Q 021411 20 WNGIDQVVLRSPHGPSAKVSLYGGQITSWRNEKGEELLFTSS--KAIFKPPKAIRGGISTCFPQFGNCG----------- 86 (312)
Q Consensus 20 ~~~~~~~~L~n~~g~~a~v~~~Ga~l~s~~~~~g~evL~~~~--~~~~~~~~~irgG~p~lfP~~gr~~----------- 86 (312)
......++|+|+++++|+|..+||.|+||+. .|+|++|..+ +.+|....+.. | ++++||.||+.
T Consensus 370 ~~~~~~~~l~n~~~~~~~i~~~Ga~l~s~~~-~g~~~v~~~~~~~~y~~~~~~~~-g-~~l~~~~nRi~~g~f~~~G~~y 446 (699)
T 1z45_A 370 RYDARFVTIGAGTRFQATFANLGASIVDLKV-NGQSVVLGYENEEGYLNPDSAYI-G-ATIGRYANRISKGKFSLCNKDY 446 (699)
T ss_dssp CTTSEEEEESTTSSEEEEEESBTTCEEEEEE-TTEECBCCCSSHHHHTCTTCCCT-T-CEECSBCSEEGGGEEEETTEEE
T ss_pred CcceEEEEEECCCceEEEEEccCeEEEEEee-cCceEEECCCCHHHHhhcCCCcc-c-cccCcccCeecCcEEEECCEEE
Confidence 3457899999995599999999999999998 5889998744 44564333433 3 57899999983
Q ss_pred CCC-------Cceee---ecCCcEEecCCCCCCCCCCCCceEEEEEecCCCCCCCcCCceeEEEEEEEEe-cCCcEEEEE
Q 021411 87 SPE-------LHGFA---RNKLWIIDDNPPPMPPNDSDGKTCVDLLLKPSEEDPKCWPYSFEYRLRVMLA-ADGGLTLIS 155 (312)
Q Consensus 87 ~~~-------~HGfa---r~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~ty~L~-~~~~L~i~~ 155 (312)
+++ +|||+ +++.|++...+. .+++..+++|++.+.++ +++|||+|+++++|+|+ ++++|+|++
T Consensus 447 ~l~~n~~~~~lHG~~~g~~~~~w~~~~~~~-----~~~~~~~~~~~~~~~~~-~~gyP~~~~~~v~y~L~~~~~~L~i~~ 520 (699)
T 1z45_A 447 QLTVNNGVNANHSSIGSFHRKRFLGPIIQN-----PSKDVFTAEYMLIDNEK-DTEFPGDLLVTIQYTVNVAQKSLEIVY 520 (699)
T ss_dssp ECCCCBTTBEETTGGGCGGGSBCEEEEEEE-----EETTEEEEEEEEEECGG-GSSSSSEEEEEEEEEEETTTTEEEEEE
T ss_pred EccCCCCCcccCCCccccceeecceeeecc-----CCCCcceEEEEEECCCc-CCCCCceEEEEEEEEEecCCCEEEEEE
Confidence 344 59999 489999742110 00122579999987655 89999999999999997 579999999
Q ss_pred EEEeCCCCceeeeeeccceeecCC-----cCeeEEEcCCCCcee--e--ccccccceeecCceeee------c---CCcc
Q 021411 156 RVRNINGKPFNFSFAYHTYLLVSD-----ISEVRIEGLETLDYL--D--NLRQRERFTEQGDAVTI------E---SEMD 217 (312)
Q Consensus 156 ~v~N~~~~~~pf~~g~HpYF~~~~-----~~~~~~~~l~~~~~~--d--~l~~~~~~~~~~~~~~~------~---~~~D 217 (312)
+++|+++++|||++|+||||+++. +.+..+. +....|+ | .+|+++.....+..++| . .++|
T Consensus 521 ~~~n~~~~~~p~~~~~H~yFnl~~~~~~~~~~~~l~-~~a~~~~~~d~~~iptg~~~~v~~t~~df~~~~~l~~~~~~~D 599 (699)
T 1z45_A 521 KGKLTAGEATPINLTNHSYFNLNKPYGDTIEGTEIM-VRSKKSVDVDKNMIPTGNIVDREIATFNSTKPTVLGPKNPQFD 599 (699)
T ss_dssp EEEEEESSEEECBCEECCEECTTTTSCSSSTTEEEE-ESCCEEEEECTTSCEEEEEEECSCCBTTSSSCEEECSSCCCCE
T ss_pred EEEecCCCCceecccccceEeecCCCCCCccccEEE-EecCeEEecCCCCCCCCCcccCcCCCcccCCcccccccCCCCC
Confidence 999999999999999999999983 3344443 3344554 2 35555421111112222 1 2789
Q ss_pred eEecCCC---------------CeEEEEeCCCCcEEEEEeeCCCCEEEeCCccccccccCCCCCCCC--CceEEecceee
Q 021411 218 RVYLRSP---------------NVIAVLDHERKRTFVLRKEGLSDVVVWNPWEKRSKSMVDFGDEEY--KQMLCVDAAAV 280 (312)
Q Consensus 218 ~~y~~~~---------------~~~~l~d~~~~~~i~i~~~~~~~~vvw~P~~~~~~~~~d~~~~~~--~~~vCvEP~~~ 280 (312)
++|.... ..++|.++.+++.|+|.+. +|.++||++..- +++| +.+||||||..
T Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~l~v~~~-~p~~~~yt~~~~---------~~~~~~~~~~clEp~~~ 669 (699)
T 1z45_A 600 CCFVVDENAKPSQINTLNNELTLIVKAFHPDSNITLEVLST-EPTYQFYTGDFL---------SAGYEARQGFAIEPGRY 669 (699)
T ss_dssp EEEESCSSCCCCCSBCTTSCCEEEEEEEETTTTEEEEEEES-SSEEEEECCTTC---------CTTCCTTSCEEEEEESC
T ss_pred cceEccCccccccccccccccceeEEEEcCCCCCEEEEEEC-CCEEEEEeCCCC---------CCCCCCCCEEEEecCCC
Confidence 9996542 1377889999999999986 999999997421 1123 57899999953
Q ss_pred ----C-----CCeEeCCCCEEEEEEEEEE
Q 021411 281 ----E-----KPITLKPGEEWTGRLQLLV 300 (312)
Q Consensus 281 ----~-----~~~~L~pGe~~~~~~~i~~ 300 (312)
+ +.++|+|||+++.+++++|
T Consensus 670 pda~n~~~~~~~~~L~pge~~~~~~~~~f 698 (699)
T 1z45_A 670 IDAINQENWKDCVTLKNGETYGSKIVYRF 698 (699)
T ss_dssp SSGGGCTTTGGGGEEETTCEEEEEEEEEE
T ss_pred CCccCcccCCCCcEECCCCEEEEEEEEEE
Confidence 1 2479999999999999987
No 16
>3ty1_A Hypothetical aldose 1-epimerase; supersandwich, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.90A {Klebsiella pneumoniae subsp}
Probab=99.92 E-value=1.9e-24 Score=203.24 Aligned_cols=257 Identities=14% Similarity=0.164 Sum_probs=168.1
Q ss_pred CCCceEEEEeCCCCCEEEEE-ccCcEEEEEEeCCCeeEEEeCCCCccCCCCcc----cccceEE------cC-----cCC
Q 021411 20 WNGIDQVVLRSPHGPSAKVS-LYGGQITSWRNEKGEELLFTSSKAIFKPPKAI----RGGISTC------FP-----QFG 83 (312)
Q Consensus 20 ~~~~~~~~L~n~~g~~a~v~-~~Ga~l~s~~~~~g~evL~~~~~~~~~~~~~i----rgG~p~l------fP-----~~g 83 (312)
..|+..++|+|+.|++++|. ..|+.|.+++. +|+++.|.++...+..+..+ |+|...+ ++ +.|
T Consensus 45 ~~G~~~l~i~ng~gl~~~VlP~rG~dI~~~~~-~g~~l~w~s~~~~~~~P~~~~~~~~~g~~~l~~f~g~~~~cGl~~~G 123 (384)
T 3ty1_A 45 QEGSKILTIHSKDGLTITLSPTRGMNLLRIEG-FGSRMGWDSPVKEVVNPAFINLESRNGLGWLEGFNEMMVRCGYEWTG 123 (384)
T ss_dssp GTTCEEEEEEESSSCEEEEEGGGTTEEEEEEE-TTEEECCCCSCCSCCCGGGCCTTHHHHTGGGGTCCCSEEEEEESCCS
T ss_pred ccCeEEEEEECCCccEEEEecccCCcceeEEE-CCEEeeecCCcccCcCccccccccCCCCchhhcCCeeEeeccCcccC
Confidence 46899999999977999999 79999999998 69999998873333322111 3444332 22 333
Q ss_pred CCC-----CCCCceeeecCC-----cEEecCCCCCCCCCCCCceEEEEEecCCCCCCCcCCceeEEEEEEEEecCCcEEE
Q 021411 84 NCG-----SPELHGFARNKL-----WIIDDNPPPMPPNDSDGKTCVDLLLKPSEEDPKCWPYSFEYRLRVMLAADGGLTL 153 (312)
Q Consensus 84 r~~-----~~~~HGfar~~~-----W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~ty~L~~~~~L~i 153 (312)
.-. .+++||++++.+ |++.+.. ...|+++....+....+|||.++.+++|+|. +++|+|
T Consensus 124 ~P~~~~G~~~~LHG~~~~~pa~~~~~~~~~~~----------~~~i~l~g~~~~~~~~G~~~~l~~~i~~~l~-~~~l~i 192 (384)
T 3ty1_A 124 HPVTADGQIYTLHGKAGNTPASLVEVEVADSA----------PYEIRIRGLVKESTFKKADLQTLTELRYVPG-SNSFSL 192 (384)
T ss_dssp SCEEETTEEECTTCSGGGSCCSEEEEEEESST----------TCCEEEEEEEEEEETTTEEEEEEEEEEECTT-CSEEEE
T ss_pred CCCCcCCccccccccccCCCcceeEEEecCCC----------ceEEEEEEEEEEeeeccCCEEEEEEEEEEeC-CCEEEE
Confidence 221 369999999999 5444321 2334444333333457899999999999998 899999
Q ss_pred EEEEEeCCCCceeeeeeccceeecCCc-CeeEEEcCCCCcee--eccccccc--eeecCceeeecCCcceEe-c----CC
Q 021411 154 ISRVRNINGKPFNFSFAYHTYLLVSDI-SEVRIEGLETLDYL--DNLRQRER--FTEQGDAVTIESEMDRVY-L----RS 223 (312)
Q Consensus 154 ~~~v~N~~~~~~pf~~g~HpYF~~~~~-~~~~~~~l~~~~~~--d~l~~~~~--~~~~~~~~~~~~~~D~~y-~----~~ 223 (312)
+.+|+|.|+++|||.+++||||..+-. .+.++. ++....+ +....... ......+. ..--+.+| . +.
T Consensus 193 ~~~VtN~g~~p~P~~~~~H~nfg~Pll~~g~rl~-~p~~~~~p~~~~~~~~l~~~~~~~~p~--~~~~E~vf~~d~~~d~ 269 (384)
T 3ty1_A 193 HDVLTNHADYPHDYQIIYHSNFGTPILEEGARFL-APISSISPFNDYAKSGLKTWQTYQGPT--KDFDEMVFNIQPLADE 269 (384)
T ss_dssp EEEEEECSSSCEEEEEEEEEEECTTTCCTTCEEE-CCEEEEEESSGGGGGGSTTTTBCCCCC--TTCCCEEEEEEECCCT
T ss_pred EEEEEECCCCCCchheecccccCCCccCCCcEEE-eccceeccccccccccccchhhccCCC--CCCCceEEEEeccccC
Confidence 999999999999999999999998732 234444 1211111 10000000 00000000 00113344 1 12
Q ss_pred CC--eEEEEeCCCCcEEEEEe--eCCCCEEEeCCccccccccCCCCCCCCCceE-Eecceee-----------CCCeEeC
Q 021411 224 PN--VIAVLDHERKRTFVLRK--EGLSDVVVWNPWEKRSKSMVDFGDEEYKQML-CVDAAAV-----------EKPITLK 287 (312)
Q Consensus 224 ~~--~~~l~d~~~~~~i~i~~--~~~~~~vvw~P~~~~~~~~~d~~~~~~~~~v-CvEP~~~-----------~~~~~L~ 287 (312)
.+ .+.|.++..+..+.+.. +.||++++|+.... .+ +.|+ |||||++ .+++.|+
T Consensus 270 ~G~~~~~l~n~~~g~~~~l~f~~~~fP~l~~W~~~~~----------~~-~gyvl~LEP~T~~p~~~~~~~~~g~l~~L~ 338 (384)
T 3ty1_A 270 NHQTLAAVVNKAGDKGASIQFDTRQLPVLTLWKNTDT----------VK-QGYVTGIEPGTSYAYPVTIERKQKRVKQLQ 338 (384)
T ss_dssp TSEEEEEEECSSSSCEEEEEEETTTSCEEEEEEEESC----------TT-TCEEEEEEEESSCSSCHHHHHHTTCCEEEC
T ss_pred CCceEEEEEecCCCcEEEEEEchHHCCHhHhhcccCC----------CC-CccEEEEeCccCCCchhHHHHhCCCeEEEC
Confidence 23 36788887888888876 46899999985210 01 2365 9999997 1589999
Q ss_pred CCCEEEEEEEEEEEe
Q 021411 288 PGEEWTGRLQLLVVP 302 (312)
Q Consensus 288 pGe~~~~~~~i~~~~ 302 (312)
|||+++++++|++..
T Consensus 339 PGes~~~~~~i~v~~ 353 (384)
T 3ty1_A 339 PGASAQFDLTYTLLH 353 (384)
T ss_dssp TTCEEEEEEEEEEEC
T ss_pred CCCEEEEEEEEEEec
Confidence 999999999999864
No 17
>3bs6_A Inner membrane protein OXAA; YIDC/OXA1/ALB3 family, membrane insertion, chaperone, SEC translocon, periplasmic domain, beta supersandwich fold; HET: PG4 PGE 2PE; 1.80A {Escherichia coli}
Probab=94.85 E-value=0.66 Score=40.86 Aligned_cols=124 Identities=11% Similarity=0.148 Sum_probs=69.0
Q ss_pred eEEEEeCCCCCEEEEEccCcEEEEEEeCC-------CeeEEEeCCCCccCCCCcccccceEEcCcCCCCC-CCCCceeee
Q 021411 24 DQVVLRSPHGPSAKVSLYGGQITSWRNEK-------GEELLFTSSKAIFKPPKAIRGGISTCFPQFGNCG-SPELHGFAR 95 (312)
Q Consensus 24 ~~~~L~n~~g~~a~v~~~Ga~l~s~~~~~-------g~evL~~~~~~~~~~~~~irgG~p~lfP~~gr~~-~~~~HGfar 95 (312)
..|+|+++. ++++|+..||.|.++..++ +.++....+.. .. .-++-+-|.+.-+ ..+.|.-
T Consensus 4 ~~i~v~td~-l~~~is~~GG~I~~~~Lk~Y~~~~~~~~pv~Ll~~~~---~~-----~y~a~~gl~~~~g~~~~~~~~-- 72 (280)
T 3bs6_A 4 KLISVKTDV-LDLTINTRGGDVEQALLPAYPKELNSTQPFQLLETSP---QF-----IYQAQSGLTGRDGPDNPANGP-- 72 (280)
T ss_dssp CEEEEECSS-CEEEEETBTTEEEEEEEEEEESSTTCCSEEEEEEEET---TE-----EEEEEEEEESTTCTTSGGGSS--
T ss_pred CEEEEECCc-EEEEEECCCCeEeeeEcCCCcchhcCCCCEEEccCCC---CC-----eeEEEEeeeccCCCCCCCCCC--
Confidence 468999999 9999999999999998631 12322111110 00 0011122334321 1233321
Q ss_pred cCCcEEecCCCCCCCCCCCCceEEEEEecCCCCCCCcCCceeEEEEEEEEec-CCcEEEEEEEEeCCCCceeee
Q 021411 96 NKLWIIDDNPPPMPPNDSDGKTCVDLLLKPSEEDPKCWPYSFEYRLRVMLAA-DGGLTLISRVRNINGKPFNFS 168 (312)
Q Consensus 96 ~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~ty~L~~-~~~L~i~~~v~N~~~~~~pf~ 168 (312)
+..|++....... .+.++...|+|+..... ...++.+|+|.. .-.+.++++|.|.+.+++.+.
T Consensus 73 ~~~f~~~~~~~~l--~~~~~~~~Vtlt~~~~~--------G~~~~ktytf~~~~Y~i~v~~~v~N~s~~~~~~~ 136 (280)
T 3bs6_A 73 RPLYNVEKDAYVL--AEGQNELQVPMTYTDAA--------GNTFTKTFVLKRGDYAVNVNYNVQNAGEKPLEIS 136 (280)
T ss_dssp CCBCBCSCSEEEC--CTTCSEEEEEEEEECTT--------CCEEEEEEEEETTCCEEEEEEEEECCSSSCEEEE
T ss_pred ceeEEecCCceec--cCCCceeEEEEEEECCC--------CeEEEEEEEEcCCceEEEEEEEEEcCCCCceeEe
Confidence 2567654211000 00123467888776322 368899999972 345888888989998765443
No 18
>3blc_A Inner membrane protein OXAA; YIDC, membrane assembly facilitator, chaperone, periplasmic inner membrane, transmembrane; 2.50A {Escherichia coli K12}
Probab=94.02 E-value=0.66 Score=41.90 Aligned_cols=122 Identities=13% Similarity=0.184 Sum_probs=67.2
Q ss_pred ceEEEEeCCCCCEEEEEccCcEEEEEEeCC-------CeeE-EEeCCCCccCCCCcccccceEEcCcCCCCC-CCCCcee
Q 021411 23 IDQVVLRSPHGPSAKVSLYGGQITSWRNEK-------GEEL-LFTSSKAIFKPPKAIRGGISTCFPQFGNCG-SPELHGF 93 (312)
Q Consensus 23 ~~~~~L~n~~g~~a~v~~~Ga~l~s~~~~~-------g~ev-L~~~~~~~~~~~~~irgG~p~lfP~~gr~~-~~~~HGf 93 (312)
-..|+|+|+. ++++|+..||.|.++..++ +.++ |...... . .-+.-+=|.+.-+ ..+.|+-
T Consensus 34 ~~~i~V~td~-l~~~is~~GG~I~~~~Lk~Y~~~~~~~~pv~Ll~~~~~----~-----~y~a~~gl~~~~g~~~~~~~~ 103 (330)
T 3blc_A 34 GKLISVKTDV-LDLTINTRGGDVEQALLPAYPKELNSTQPFQLLETSPQ----F-----IYQAQSGLTGRDGPDNPANGP 103 (330)
T ss_dssp CCEEEEECSS-CEEEEETBTCCEEEEEEEEEESSTTCSSEEEEEEECSS----C-----EEEEEEEEESTTCTTSGGGCS
T ss_pred CCEEEEECCc-EEEEEECCCCEEeEEECCCCcccccCCCCeEEecCCCC----c-----eeEeeeeeeccCCCCCCCCCC
Confidence 4679999999 9999999999999998631 1233 2221110 0 0011011333211 1223321
Q ss_pred eecCCcEEecCCCCCCCCCCCCceEEEEEecCCCCCCCcCCceeEEEEEEEEecCC--cEEEEEEEEeCCCCceee
Q 021411 94 ARNKLWIIDDNPPPMPPNDSDGKTCVDLLLKPSEEDPKCWPYSFEYRLRVMLAADG--GLTLISRVRNINGKPFNF 167 (312)
Q Consensus 94 ar~~~W~v~~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~ty~L~~~~--~L~i~~~v~N~~~~~~pf 167 (312)
| ..|++...+.... +.++...|+|+..... ...++.+|+|. ++ .+.++++|.|.+++++..
T Consensus 104 -~-~~f~~~~~~~~L~--~~~~~~~v~lt~~~~~--------G~~v~k~ytf~-~~~Y~i~v~~~v~N~s~~~~~~ 166 (330)
T 3blc_A 104 -R-PLYNVEKDAYVLA--EGQNELQVPMTYTDAA--------GNTFTKTFVLK-RGDYAVNVNYNVQNAGEKPLEI 166 (330)
T ss_dssp -C-CBCBCSCSEEECC--TTCCEEEEEEEEECTT--------SCEEEEEEEEE-TTCCEEEEEEEEECCSSSCEEE
T ss_pred -c-ceeEecCCceecc--CCCceEEEEEEEECCC--------CeEEEEEEEEc-CCceEEEEEEEEEcCCCCccee
Confidence 2 4476432110000 0122466777775322 36889999998 44 577888999999876543
No 19
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=77.03 E-value=5.6 Score=30.27 Aligned_cols=33 Identities=9% Similarity=0.257 Sum_probs=27.4
Q ss_pred eeEEEEEEEEecCCcEEEEEEEEeCCCCceeeee
Q 021411 136 SFEYRLRVMLAADGGLTLISRVRNINGKPFNFSF 169 (312)
Q Consensus 136 ~f~l~~ty~L~~~~~L~i~~~v~N~~~~~~pf~~ 169 (312)
...+++++.-. ++.+.+.++|+|.+++++.+.+
T Consensus 6 ~l~~~v~~~~~-g~~v~~~ltv~N~s~~~v~l~f 38 (120)
T 3isy_A 6 EVVLSIDAIQE-PEQIKFNMSLKNQSERAIEFQF 38 (120)
T ss_dssp SEEEEEEEEEC-SSCEEEEEEEEECSSSCEEEEE
T ss_pred EEEEEEeeccC-CCeEEEEEEEEcCCCCcEEEEe
Confidence 56777777777 8999999999999999876654
No 20
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=74.64 E-value=2.7 Score=30.73 Aligned_cols=31 Identities=23% Similarity=0.269 Sum_probs=24.0
Q ss_pred EEEecCCcEEEEEEEEeCCCCceeeeeeccceee
Q 021411 143 VMLAADGGLTLISRVRNINGKPFNFSFAYHTYLL 176 (312)
Q Consensus 143 y~L~~~~~L~i~~~v~N~~~~~~pf~~g~HpYF~ 176 (312)
+.|. .+.=+++++|+|+||+| ++.|-|-.|.
T Consensus 13 I~lN-~gr~~~~l~V~NtGDRP--IQVGSHyHF~ 43 (101)
T 4ep8_B 13 IALN-TGRATCRVVVENHGDRP--IQVGSHYHFA 43 (101)
T ss_dssp EECS-TTCCEEEEEEEECSSSC--EEEETTSCGG
T ss_pred EEEc-CCCCEEEEEEEeCCCcc--eEEccccChh
Confidence 4666 66778999999999985 5677777774
No 21
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=66.36 E-value=4.1 Score=31.04 Aligned_cols=31 Identities=19% Similarity=0.338 Sum_probs=24.1
Q ss_pred EEEecCCcEEEEEEEEeCCCCceeeeeeccceee
Q 021411 143 VMLAADGGLTLISRVRNINGKPFNFSFAYHTYLL 176 (312)
Q Consensus 143 y~L~~~~~L~i~~~v~N~~~~~~pf~~g~HpYF~ 176 (312)
+.|. ...=+++++|+|+||+| ++.|-|-.|.
T Consensus 19 I~lN-~gr~~~~l~V~NtGDRP--IQVGSHyHF~ 49 (126)
T 4ubp_B 19 IEIN-AGREKTTIRVSNTGDRP--IQVGSHIHFV 49 (126)
T ss_dssp EETT-TTSCEEEEEEEECSSSC--EEEETTSCGG
T ss_pred EEeC-CCCcEEEEEEEeCCCCC--EEEccccchh
Confidence 5676 67778999999999985 5677777663
No 22
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=66.36 E-value=4.1 Score=31.04 Aligned_cols=31 Identities=19% Similarity=0.338 Sum_probs=24.1
Q ss_pred EEEecCCcEEEEEEEEeCCCCceeeeeeccceee
Q 021411 143 VMLAADGGLTLISRVRNINGKPFNFSFAYHTYLL 176 (312)
Q Consensus 143 y~L~~~~~L~i~~~v~N~~~~~~pf~~g~HpYF~ 176 (312)
+.|. ...=+++++|+|+||+| ++.|-|-.|.
T Consensus 19 I~lN-~gr~~~~l~V~NtGDRP--IQVGSHyHF~ 49 (126)
T 4ac7_B 19 IEIN-AGREKTTIRVSNTGDRP--IQVGSHIHFV 49 (126)
T ss_dssp EETT-TTSCEEEEEEEECSSSC--EEEETTSCGG
T ss_pred EEeC-CCCcEEEEEEEeCCCCC--EEEccccchh
Confidence 5676 67778999999999985 5677777663
No 23
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=57.89 E-value=10 Score=34.32 Aligned_cols=28 Identities=7% Similarity=0.179 Sum_probs=24.3
Q ss_pred EEEEEEecCCcEEEEEEEEeCCCCceeee
Q 021411 140 RLRVMLAADGGLTLISRVRNINGKPFNFS 168 (312)
Q Consensus 140 ~~ty~L~~~~~L~i~~~v~N~~~~~~pf~ 168 (312)
..+|++- +.+|+++++|+|.|++|..++
T Consensus 256 ~A~Y~vp-gR~l~~~~~VtN~g~~pvrlg 283 (382)
T 1yew_A 256 DATYRVP-GRAMRMKLTITNHGNSPIRLG 283 (382)
T ss_dssp EEEEESS-CSEEEEEEEEEECSSSCEEEE
T ss_pred ccEEecC-CcEEEEEEEEEcCCCCceEee
Confidence 5679998 999999999999999987543
No 24
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=54.55 E-value=11 Score=34.58 Aligned_cols=28 Identities=18% Similarity=0.203 Sum_probs=24.2
Q ss_pred EEEEEEecCCcEEEEEEEEeCCCCceeee
Q 021411 140 RLRVMLAADGGLTLISRVRNINGKPFNFS 168 (312)
Q Consensus 140 ~~ty~L~~~~~L~i~~~v~N~~~~~~pf~ 168 (312)
..+|++- +.+|+++++|+|.|++|..++
T Consensus 290 ~A~Y~vp-gR~l~~~~~VtN~g~~pvrlg 317 (419)
T 3rfr_A 290 GGVYKVP-GRELTINVKVKNGTSQPVRLG 317 (419)
T ss_dssp EEEEESS-SSEEEEEEEEECCSSSCBEEE
T ss_pred ceEEecC-CcEEEEEEEEecCCCCceEEe
Confidence 5679998 999999999999999987443
No 25
>3qga_A UREA2, fusion of urease beta and gamma subunits; iron metalloenzyme, alpha-beta barrel, hydrolase; HET: FME KCX; 3.00A {Helicobacter mustelae} PDB: 3qgk_A*
Probab=42.42 E-value=12 Score=31.41 Aligned_cols=31 Identities=19% Similarity=0.180 Sum_probs=23.8
Q ss_pred EEEecCCcEEEEEEEEeCCCCceeeeeeccceee
Q 021411 143 VMLAADGGLTLISRVRNINGKPFNFSFAYHTYLL 176 (312)
Q Consensus 143 y~L~~~~~L~i~~~v~N~~~~~~pf~~g~HpYF~ 176 (312)
+.|. .+.=+++++|+|+||+| ++.|-|-.|.
T Consensus 118 I~lN-~gr~~~~l~V~NtGDRP--IQVGSHyHF~ 148 (225)
T 3qga_A 118 IELN-AGKEITELKVTNKGPKS--LHVGSHFHFF 148 (225)
T ss_dssp EETT-TTCCCEEEEEEECSSSC--EEEETTSCGG
T ss_pred eecC-CCCceEEEEEEECCCCc--eeeccccchh
Confidence 5666 56778999999999985 5667777664
No 26
>1e9y_A Urease subunit alpha; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.85.3.1 d.8.1.1 PDB: 1e9z_A*
Probab=38.77 E-value=13 Score=31.48 Aligned_cols=42 Identities=14% Similarity=0.320 Sum_probs=27.9
Q ss_pred cCCceeEEE-EEEEEecCCcEEEEEEEEeCCCCceeeeeeccceee
Q 021411 132 CWPYSFEYR-LRVMLAADGGLTLISRVRNINGKPFNFSFAYHTYLL 176 (312)
Q Consensus 132 ~~P~~f~l~-~ty~L~~~~~L~i~~~v~N~~~~~~pf~~g~HpYF~ 176 (312)
.-|+.+... -.+.|. .+.=+++++|+|+||+| ++.|-|-.|.
T Consensus 106 miPGei~~~~g~I~lN-~gr~~~~l~V~NtGDRP--IQVGSHyHF~ 148 (238)
T 1e9y_A 106 LVPGELFLKNEDITIN-EGKKAVSVKVKNVGDRP--VQIGSHFHFF 148 (238)
T ss_dssp CCTTCEECCSCEEETT-TTCCCCEEEEEECSSSC--EEEETTSCGG
T ss_pred CCCCeEEcCCCCeeeC-CCCCeEEEEEEeCCCCc--eEeccccchH
Confidence 446544331 136676 56668999999999985 5667777664
No 27
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A*
Probab=36.80 E-value=1.5e+02 Score=29.50 Aligned_cols=58 Identities=14% Similarity=0.145 Sum_probs=40.3
Q ss_pred CceEEEEEecCCCCCCCcCCceeEEEEEEEEecC-CcEEEEEEEEeCCCCceeeeeeccceeecCC
Q 021411 115 GKTCVDLLLKPSEEDPKCWPYSFEYRLRVMLAAD-GGLTLISRVRNINGKPFNFSFAYHTYLLVSD 179 (312)
Q Consensus 115 ~~~~v~l~l~~~~~~~~~~P~~f~l~~ty~L~~~-~~L~i~~~v~N~~~~~~pf~~g~HpYF~~~~ 179 (312)
+..++++.|.+.. ..+++++.|++-++ .-++...+|+|+|++++.+.-..-.-+.++.
T Consensus 129 ~~~~l~i~l~D~~-------~~l~v~l~y~~~~~~~vi~~~~~i~N~g~~~v~l~~~~s~~l~~~~ 187 (729)
T 4fnq_A 129 EAETLEIVLGDAL-------IGLEVTLQYTAYEKWNVITRAARFENKGGERLKLLRALSMSVDFPT 187 (729)
T ss_dssp GEEEEEEEEEETT-------TTEEEEEEEEEESSSSEEEEEEEEEECSSSCEEEEEEEEEEEEESC
T ss_pred CceEEEEEEEeCC-------CCeEEEEEEEEECCCCEEEEEEEEEECCCCCEEEeEeeeecCcCCC
Confidence 4566777777532 26789999999622 4578889999999998766554444455554
No 28
>2wnx_A Glycoside hydrolase, family 9; cellulose degradation; 1.31A {Clostridium thermocellum} PDB: 2wo4_A 2wob_A
Probab=31.72 E-value=98 Score=24.72 Aligned_cols=34 Identities=12% Similarity=0.229 Sum_probs=28.2
Q ss_pred CCcEEEEEEEEeCCCCceeee-eeccceeecCCcC
Q 021411 148 DGGLTLISRVRNINGKPFNFS-FAYHTYLLVSDIS 181 (312)
Q Consensus 148 ~~~L~i~~~v~N~~~~~~pf~-~g~HpYF~~~~~~ 181 (312)
.+.+.+.++|+|++..+...+ +.+.=||.++...
T Consensus 26 ~n~i~~~~~I~N~g~~~i~Ls~lkiRYyft~d~~~ 60 (170)
T 2wnx_A 26 KNTIRATINIKNTGTTPVNLSDIKVRYWFTSDGNE 60 (170)
T ss_dssp CCEEEEEEEEEECSSSCEEGGGEEEEEEECCTTCS
T ss_pred CCEEEEEEEEEECCCCceecCcEEEEEEEcCCCCc
Confidence 578999999999999887765 8899999887543
No 29
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A*
Probab=31.50 E-value=1.1e+02 Score=30.33 Aligned_cols=56 Identities=14% Similarity=0.125 Sum_probs=37.9
Q ss_pred ceEEEEEecCCCCCCCcCCceeEEEEEEEEecC-CcEEEEEEEEeCCCCceeeeeeccceeecC
Q 021411 116 KTCVDLLLKPSEEDPKCWPYSFEYRLRVMLAAD-GGLTLISRVRNINGKPFNFSFAYHTYLLVS 178 (312)
Q Consensus 116 ~~~v~l~l~~~~~~~~~~P~~f~l~~ty~L~~~-~~L~i~~~v~N~~~~~~pf~~g~HpYF~~~ 178 (312)
..++++.|.+.. ..+++++.|++.++ .-++...+++|++++++.+.-..=.-+.++
T Consensus 130 ~~~l~i~l~D~~-------~~l~v~l~y~~~~~~~vi~~~~~i~N~g~~~~~l~~~~s~~l~~~ 186 (720)
T 2yfo_A 130 AQTLEIVLADEN-------AQVEVHLLYGVLEENDVITRSVRIKNTGTGQITIEKAAAACLDFV 186 (720)
T ss_dssp EEEEEEEEEETT-------TTEEEEEEEEEETTTTEEEEEEEEEECSSSCEEEEEEEEEEEEES
T ss_pred CcEEEEEEEECC-------CCEEEEEEEEEECCCCEEEEEEEEEECCCCCEEEeeeecccccCC
Confidence 456777777532 26789999999832 468889999999998765554333333343
No 30
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.73 E-value=54 Score=24.24 Aligned_cols=41 Identities=17% Similarity=0.094 Sum_probs=33.1
Q ss_pred EEEEEEEEecCCcEEEEEEEEeCCCCceeeeeeccceeecCC
Q 021411 138 EYRLRVMLAADGGLTLISRVRNINGKPFNFSFAYHTYLLVSD 179 (312)
Q Consensus 138 ~l~~ty~L~~~~~L~i~~~v~N~~~~~~pf~~g~HpYF~~~~ 179 (312)
.+..-+..- +..-+..+.++|.|+.+..|.+-..+.|.+..
T Consensus 31 ~l~fg~~~v-~~~~~~~~~l~N~g~~~~~f~~~~~~~F~i~P 71 (122)
T 2ys4_A 31 KLNFSTCPV-KYSTQKILLVRNIGNKNAVFHIKTCRPFSIEP 71 (122)
T ss_dssp EECCCSEES-SSCEEEEEEEECCSSSCEEEEEECCTTEEEES
T ss_pred eeecCCeec-CCeEEEEEEEEECCCCCEEEEEecCCCeEEEC
Confidence 344455666 68889999999999999999988888888754
No 31
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=30.31 E-value=47 Score=22.03 Aligned_cols=19 Identities=16% Similarity=0.165 Sum_probs=14.7
Q ss_pred eEEEEEEEEecCCcEEEEEE
Q 021411 137 FEYRLRVMLAADGGLTLISR 156 (312)
Q Consensus 137 f~l~~ty~L~~~~~L~i~~~ 156 (312)
|.-+++|+|. ++.|.|.++
T Consensus 29 fagtvtytld-gndleirit 47 (85)
T 2kl8_A 29 FAGTVTYTLD-GNDLEIRIT 47 (85)
T ss_dssp TTCEEEEEEC-SSCEEEEEE
T ss_pred hcceEEEEec-CCeeEEEEe
Confidence 3348999999 898887764
No 32
>2xbt_A Cellulosomal scaffoldin; sugar binding protein; 1.83A {Bacteroides cellulosolvens}
Probab=29.07 E-value=85 Score=24.82 Aligned_cols=35 Identities=9% Similarity=0.240 Sum_probs=28.5
Q ss_pred CCcEEEEEEEEeCCCCceeee-eeccceeecCCcCe
Q 021411 148 DGGLTLISRVRNINGKPFNFS-FAYHTYLLVSDISE 182 (312)
Q Consensus 148 ~~~L~i~~~v~N~~~~~~pf~-~g~HpYF~~~~~~~ 182 (312)
.+.+.+.++|+|++..+.... +-++=||..+....
T Consensus 23 ~n~i~~~~~I~N~g~~~i~Ls~lkiRYyft~d~~~~ 58 (160)
T 2xbt_A 23 SNQIYMNMKLQNTGSSTYDLSKITIRYFYTSDDDKA 58 (160)
T ss_dssp ESSEEEEEEEEECSSCCEEGGGEEEEEEECCSSCCC
T ss_pred CCEEEEEEEEEECCCCceecCcEEEEEEEeCCCCce
Confidence 467999999999999877665 88999998876433
No 33
>4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A*
Probab=27.89 E-value=42 Score=34.12 Aligned_cols=31 Identities=19% Similarity=0.281 Sum_probs=24.1
Q ss_pred EEEEecCCcEEEEEEEEeCCCCceeeeeecccee
Q 021411 142 RVMLAADGGLTLISRVRNINGKPFNFSFAYHTYL 175 (312)
Q Consensus 142 ty~L~~~~~L~i~~~v~N~~~~~~pf~~g~HpYF 175 (312)
.+.|. .+.=+++++|+|+||+|+ +.|-|-.|
T Consensus 143 ~~~~~-~~~~~~~~~v~~~~~r~~--~v~sh~hf 173 (840)
T 4gy7_A 143 CLTLN-IGRKAVILKVTSKGDRPI--QVGSHYHF 173 (840)
T ss_dssp EEECS-CSCEEEEEEEEECCSSCE--EEETTSCG
T ss_pred ceEec-CCCceEEEEEEeCCCCce--Eeccccch
Confidence 45777 677899999999999855 66666655
No 34
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A*
Probab=25.63 E-value=1.2e+02 Score=30.22 Aligned_cols=56 Identities=13% Similarity=0.045 Sum_probs=37.4
Q ss_pred ceEEEEEecCCCCCCCcCCceeEEEEEEEEecC-CcEEEEEEEEeCCCCceeeeeeccceeecC
Q 021411 116 KTCVDLLLKPSEEDPKCWPYSFEYRLRVMLAAD-GGLTLISRVRNINGKPFNFSFAYHTYLLVS 178 (312)
Q Consensus 116 ~~~v~l~l~~~~~~~~~~P~~f~l~~ty~L~~~-~~L~i~~~v~N~~~~~~pf~~g~HpYF~~~ 178 (312)
..++++.|.+.. ..++++++|++.++ .-++...+++|++++++.+.-..=.-+.++
T Consensus 134 ~~~l~i~l~D~~-------~~l~v~l~y~~~~~~~~i~~~~~i~N~g~~~~~l~~~~s~~l~~p 190 (732)
T 2xn2_A 134 AQTLIVTLEDKV-------SKLEYDLLYTIYRDRPVIVRSVQVHNHGEEAVYLEKVASMQMDYV 190 (732)
T ss_dssp EEEEEEEEEETT-------TTEEEEEEEEEETTSSEEEEEEEEEECSSSCEEEEEEEEEEEEES
T ss_pred CcEEEEEEEeCC-------CCEEEEEEEEEECCCCEEEEEEEEEECcCCcEEEeEEeeccccCC
Confidence 345777776532 26789999999832 358888999999998865554333334444
No 35
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis}
Probab=25.38 E-value=1.7e+02 Score=29.29 Aligned_cols=47 Identities=4% Similarity=0.041 Sum_probs=34.1
Q ss_pred CceEEEEEecCCCCCCCcCCceeEEEEEEEEecC-CcEEEEEEEEeCCCCceeee
Q 021411 115 GKTCVDLLLKPSEEDPKCWPYSFEYRLRVMLAAD-GGLTLISRVRNINGKPFNFS 168 (312)
Q Consensus 115 ~~~~v~l~l~~~~~~~~~~P~~f~l~~ty~L~~~-~~L~i~~~v~N~~~~~~pf~ 168 (312)
+..++++.|.+.. ..+++++.|++.++ .-++...+++|.+++++-+.
T Consensus 130 ~~~~l~i~l~D~~-------~~l~v~l~y~~~~~~~vi~~~~~i~N~g~~~v~l~ 177 (745)
T 3mi6_A 130 DAQTLVVSFNDRI-------TGLALDLNYSIFPHQDVIVKSAKFTNPSSEKLVLN 177 (745)
T ss_dssp CCEEEEEEEEETT-------TCCEEEEEEEEEGGGTEEEEEEEEECCSSSCEEEE
T ss_pred CCCEEEEEEEeCC-------CCeEEEEEEEEECCCCEEEEEEEEEECCCCCEEee
Confidence 3567788887532 25688889998733 56777789999999887654
No 36
>1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} SCOP: a.8.3.2 b.30.5.8 c.6.2.2 PDB: 1k1w_A 1k1y_A*
Probab=22.97 E-value=1.2e+02 Score=29.75 Aligned_cols=37 Identities=19% Similarity=0.356 Sum_probs=29.3
Q ss_pred CCCceEEEEeCCCCCEEEEE-ccCcEEEEEEeC-CCeeEE
Q 021411 20 WNGIDQVVLRSPHGPSAKVS-LYGGQITSWRNE-KGEELL 57 (312)
Q Consensus 20 ~~~~~~~~L~n~~g~~a~v~-~~Ga~l~s~~~~-~g~evL 57 (312)
..|...+.++++. +.+.+. ..||.|.++... ...+++
T Consensus 395 ~dg~~e~l~~~~~-~n~~~~~~~Gg~i~e~~~~~~~~n~~ 433 (659)
T 1k1x_A 395 FDGRAEIMVENDG-FIATIKPHYGGSIFELSSKRKAVNYN 433 (659)
T ss_dssp SSSSCEEEEECSS-EEEEEETTTTTEEEEEEETTTTEETT
T ss_pred CCCceeeeeeCCc-eEEEEccCCCCEEEEEeccchhccHh
Confidence 4778889999998 899999 569999999874 345543
No 37
>3zqx_A Cellulose 1,4-beta-cellobiosidase; hydrolase, cellulose binding protein; 1.04A {Clostridium thermocellum} PDB: 2ylk_A
Probab=20.97 E-value=2.2e+02 Score=22.03 Aligned_cols=39 Identities=8% Similarity=0.149 Sum_probs=30.8
Q ss_pred CCcEEEEEEEEeCCCCceeee-eeccceeecCCcCeeEEE
Q 021411 148 DGGLTLISRVRNINGKPFNFS-FAYHTYLLVSDISEVRIE 186 (312)
Q Consensus 148 ~~~L~i~~~v~N~~~~~~pf~-~g~HpYF~~~~~~~~~~~ 186 (312)
.+++...+.|+|++..+.... +.+.=||......++.+.
T Consensus 16 ~n~i~~~~~I~N~g~~~i~Ls~lkiRYyft~d~~~~~~~~ 55 (146)
T 3zqx_A 16 TQEIKGKFNIVNTGNRDYSLKDIVLRYYFTKEHNSQLQFI 55 (146)
T ss_dssp ESCEEEEEEEEECSSCCEEGGGEEEEEECCCCCCSCEEEE
T ss_pred CCEEeEEEEEEECCCceEEcCcEEEEEEEecCCCccEEEE
Confidence 367999999999998887766 888999988765555554
No 38
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.37 E-value=2.2e+02 Score=20.01 Aligned_cols=22 Identities=9% Similarity=-0.020 Sum_probs=19.0
Q ss_pred CCcEEEEEEEEeCCCCceeeee
Q 021411 148 DGGLTLISRVRNINGKPFNFSF 169 (312)
Q Consensus 148 ~~~L~i~~~v~N~~~~~~pf~~ 169 (312)
+...+.+++++|+|+.|+.|.+
T Consensus 25 g~~~~~~~~l~N~g~~p~~~~~ 46 (112)
T 2e6j_A 25 GSAHCYEAILYNKGSIDALFNM 46 (112)
T ss_dssp SCCEEEEEEEEECCSSCEEEEE
T ss_pred CCEEEEEEEEEECCcceEEEEE
Confidence 5678889999999999988876
Done!