BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021415
(312 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 154 bits (388), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 101/285 (35%), Positives = 147/285 (51%), Gaps = 6/285 (2%)
Query: 3 ELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQ---EFIDEVCFLASI 59
+L AT NF K LIG G FG+VYKG+L+DG VA+K+R +Q EF E+ L+
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
+H +LV+L+G+C E N LIY+Y+ NG++ HLYG S + + ++ RL I
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYG-SDLPTMSMSWEQRLEICIGAARG 151
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
++H+D K+ N+L+DE+F+ K+ D G+ D V ++
Sbjct: 152 LHYLHTRA--IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYID 209
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKIL 239
E R +EKSDVYSFGV L E++ R A E S + L +I+
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV 269
Query: 240 DERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
D L E + +F V+CL SSE RPSM DV+ +L+ L
Sbjct: 270 DPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL 314
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 151/288 (52%), Gaps = 12/288 (4%)
Query: 3 ELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQ---EFIDEVCFLASI 59
+L AT NF K LIG G FG+VYKG+L+DG VA+K+R +Q EF E+ L+
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
+H +LV+L+G+C E N LIY+Y+ NG++ HLYG S + + ++ RL I
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYG-SDLPTMSMSWEQRLEICIGAARG 151
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNF---LGRTDVAGPSSQVTADEI 176
++H+D K+ N+L+DE+F+ K+ D G+ LG+T + V
Sbjct: 152 LHYLHTRA--IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLX---XVVKGTLG 206
Query: 177 FLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLL 236
++ E R +EKSDVYSFGV L E++ R A E S + L
Sbjct: 207 YIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLE 266
Query: 237 KILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
+I+D L E + +F V+CL SSE RPSM DV+ +L+ L
Sbjct: 267 QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL 314
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 140 bits (354), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 147/288 (51%), Gaps = 9/288 (3%)
Query: 1 MEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKK----RPGAPTQEFIDEVCFL 56
+ EL +A+ NFS+KN++G G FG+VYKG L DG LVA+K+ R +F EV +
Sbjct: 30 LRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMI 89
Query: 57 ASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXX-X 115
+ HRNL+ L G+C + L+Y Y+ NGSV+ L + S+ L++ R I
Sbjct: 90 SMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPE-SQPPLDWPKRQRIALGS 148
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
P+++H+D K AN+L+DE+F A V D GL + D + V
Sbjct: 149 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-VRGTI 207
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREA--XXXXXXXXXXXXVELVQNSRDFS 233
+A E + SEK+DV+ +GV LLEL++G+ A ++ V+
Sbjct: 208 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 267
Query: 234 NLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELD 281
L ++D L + +E +E+ IQ+ + C S RP MS+VV L+
Sbjct: 268 KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 140 bits (353), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 147/288 (51%), Gaps = 9/288 (3%)
Query: 1 MEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQ----EFIDEVCFL 56
+ EL +A+ NF +KN++G G FG+VYKG L DG LVA+K+ TQ +F EV +
Sbjct: 22 LRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMI 81
Query: 57 ASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXX-X 115
+ HRNL+ L G+C + L+Y Y+ NGSV+ L + S+ L++ R I
Sbjct: 82 SMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPE-SQPPLDWPKRQRIALGS 140
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
P+++H+D K AN+L+DE+F A V D GL + D + V
Sbjct: 141 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-VRGXI 199
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREA--XXXXXXXXXXXXVELVQNSRDFS 233
+A E + SEK+DV+ +GV LLEL++G+ A ++ V+
Sbjct: 200 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 259
Query: 234 NLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELD 281
L ++D L + +E +E+ IQ+ + C S RP MS+VV L+
Sbjct: 260 KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 105/221 (47%), Gaps = 19/221 (8%)
Query: 3 ELSLATKNFSDK------NLIGEGKFGEVYKGLLQDGMLVAIKKRPGAP-------TQEF 49
EL T NF ++ N +GEG FG VYKG + + VA+KK Q+F
Sbjct: 19 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQF 77
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
E+ +A QH NLV LLG+ + + L+Y Y+PNGS+ L L + R
Sbjct: 78 DQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSWHMR 135
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSS 169
I +H+D K+AN+L+DE F AK++D GL + S
Sbjct: 136 CKIAQGAANGINFLHEN--HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXS 193
Query: 170 QVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREA 210
++ ++A E + KSD+YSFGV LLE+++G A
Sbjct: 194 RIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPA 233
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 104/221 (47%), Gaps = 19/221 (8%)
Query: 3 ELSLATKNFSDK------NLIGEGKFGEVYKGLLQDGMLVAIKKRPGAP-------TQEF 49
EL T NF ++ N +GEG FG VYKG + + VA+KK Q+F
Sbjct: 13 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQF 71
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
E+ +A QH NLV LLG+ + + L+Y Y+PNGS+ L L + R
Sbjct: 72 DQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSWHMR 129
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSS 169
I +H+D K+AN+L+DE F AK++D GL +
Sbjct: 130 CKIAQGAANGINFLHEN--HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXX 187
Query: 170 QVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREA 210
++ ++A E + KSD+YSFGV LLE+++G A
Sbjct: 188 RIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPA 227
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 104/221 (47%), Gaps = 19/221 (8%)
Query: 3 ELSLATKNFSDK------NLIGEGKFGEVYKGLLQDGMLVAIKKRPGAP-------TQEF 49
EL T NF ++ N +GEG FG VYKG + + VA+KK Q+F
Sbjct: 19 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQF 77
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
E+ +A QH NLV LLG+ + + L+Y Y+PNGS+ L L + R
Sbjct: 78 DQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSWHMR 135
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSS 169
I +H+D K+AN+L+DE F AK++D GL +
Sbjct: 136 CKIAQGAANGINFLHEN--HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXX 193
Query: 170 QVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREA 210
++ ++A E + KSD+YSFGV LLE+++G A
Sbjct: 194 RIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPA 233
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 101/221 (45%), Gaps = 19/221 (8%)
Query: 3 ELSLATKNFSDK------NLIGEGKFGEVYKGLLQDGMLVAIKKRPGAP-------TQEF 49
EL T NF ++ N GEG FG VYKG + + VA+KK Q+F
Sbjct: 10 ELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQF 68
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
E+ A QH NLV LLG+ + + L+Y Y PNGS+ L L + R
Sbjct: 69 DQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL--SCLDGTPPLSWHXR 126
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSS 169
I +H+D K+AN+L+DE F AK++D GL + S
Sbjct: 127 CKIAQGAANGINFLHEN--HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXS 184
Query: 170 QVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREA 210
++ + A E + KSD+YSFGV LLE+++G A
Sbjct: 185 RIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPA 224
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 108/217 (49%), Gaps = 24/217 (11%)
Query: 2 EELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIK---------KRPGAPTQEFIDE 52
+++ + + + K IG G FG V++ G VA+K +R EF+ E
Sbjct: 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAER----VNEFLRE 84
Query: 53 VCFLASIQHRNLVTLLG-YCQENNLQFLIYEYIPNGSVS--IHLYGPSQVSRQKLEFKHR 109
V + ++H N+V +G Q NL ++ EY+ GS+ +H G +R++L+ + R
Sbjct: 85 VAIMKRLRHPNIVLFMGAVTQPPNLS-IVTEYLSRGSLYRLLHKSG----AREQLDERRR 139
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSS 169
LS+ P +VH++ K+ N+LVD+ + KV D GL T ++ S+
Sbjct: 140 LSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSA 199
Query: 170 QVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
T + ++A EV +EKSDVYSFGV L EL +
Sbjct: 200 AGTPE--WMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 118/267 (44%), Gaps = 26/267 (9%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPTQE-FIDEVCFLASIQHRNLVTLLGYCQEN 74
IG G+FG V+ G + VAIK R GA ++E FI+E + + H LV L G C E
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKD 134
L++E++ +G +S +L Q+ F + V+H+D
Sbjct: 75 APICLVFEFMEHGCLSDYL------RTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRD 128
Query: 135 FKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS-EVKEFRRFSEKSD 193
N LV E+ + KV+D G+ F+ D SS T + AS EV F R+S KSD
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 194 VYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLWSTFTNEGME 253
V+SFGV + E+ S E VE D S ++ RL ST
Sbjct: 187 VWSFGVLMWEVFS--EGKIPYENRSNSEVVE------DISTGFRLYKPRLASTHV----- 233
Query: 254 EFIQLIVRCLDPSSERRPSMSDVVTEL 280
Q++ C E RP+ S ++ +L
Sbjct: 234 --YQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 103/210 (49%), Gaps = 11/210 (5%)
Query: 1 MEELSLATKNFSDKNLIGEGKFGEVYKGLLQD-GMLVAIK--KRPGAPTQEFIDEVCFLA 57
+++ + + + K+ +G G+FGEVY+G+ + + VA+K K +EF+ E +
Sbjct: 3 LDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 62
Query: 58 SIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXX 117
I+H NLV LLG C ++I E++ G++ +L + +RQ E + +
Sbjct: 63 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQ--EVSAVVLLYMATQ 117
Query: 118 XXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFL-GRTDVAGPSSQVTADEI 176
+H+D N LV E+ + KVAD GL + G T A ++
Sbjct: 118 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK-- 175
Query: 177 FLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
+ A E + +FS KSDV++FGV L E+ +
Sbjct: 176 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 118/267 (44%), Gaps = 26/267 (9%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPTQE-FIDEVCFLASIQHRNLVTLLGYCQEN 74
IG G+FG V+ G + VAIK R GA ++E FI+E + + H LV L G C E
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 72
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKD 134
L++E++ +G +S +L Q+ F + V+H+D
Sbjct: 73 APICLVFEFMEHGCLSDYL------RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD 126
Query: 135 FKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS-EVKEFRRFSEKSD 193
N LV E+ + KV+D G+ F+ D SS T + AS EV F R+S KSD
Sbjct: 127 LAARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 184
Query: 194 VYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLWSTFTNEGME 253
V+SFGV + E+ S E VE D S ++ RL ST
Sbjct: 185 VWSFGVLMWEVFS--EGKIPYENRSNSEVVE------DISTGFRLYKPRLASTHV----- 231
Query: 254 EFIQLIVRCLDPSSERRPSMSDVVTEL 280
Q++ C E RP+ S ++ +L
Sbjct: 232 --YQIMNHCWKERPEDRPAFSRLLRQL 256
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 118/267 (44%), Gaps = 26/267 (9%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPTQE-FIDEVCFLASIQHRNLVTLLGYCQEN 74
IG G+FG V+ G + VAIK R GA ++E FI+E + + H LV L G C E
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKD 134
L++E++ +G +S +L Q+ F + V+H+D
Sbjct: 75 APICLVFEFMEHGCLSDYL------RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD 128
Query: 135 FKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS-EVKEFRRFSEKSD 193
N LV E+ + KV+D G+ F+ D SS T + AS EV F R+S KSD
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 194 VYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLWSTFTNEGME 253
V+SFGV + E+ S E VE D S ++ RL ST
Sbjct: 187 VWSFGVLMWEVFS--EGKIPYENRSNSEVVE------DISTGFRLYKPRLASTHV----- 233
Query: 254 EFIQLIVRCLDPSSERRPSMSDVVTEL 280
Q++ C E RP+ S ++ +L
Sbjct: 234 --YQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 11/210 (5%)
Query: 1 MEELSLATKNFSDKNLIGEGKFGEVYKGLLQD-GMLVAIK--KRPGAPTQEFIDEVCFLA 57
M++ + + + K+ +G G++GEVY G+ + + VA+K K +EF+ E +
Sbjct: 24 MDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 83
Query: 58 SIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXX 117
I+H NLV LLG C +++ EY+P G++ +L + +R+ E + +
Sbjct: 84 EIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL---RECNRE--EVTAVVLLYMATQ 138
Query: 118 XXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFL-GRTDVAGPSSQVTADEI 176
+H+D N LV E+ + KVAD GL + G T A ++
Sbjct: 139 ISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIK-- 196
Query: 177 FLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
+ A E + FS KSDV++FGV L E+ +
Sbjct: 197 WTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 118/267 (44%), Gaps = 26/267 (9%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPTQE-FIDEVCFLASIQHRNLVTLLGYCQEN 74
IG G+FG V+ G + VAIK R GA ++E FI+E + + H LV L G C E
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 77
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKD 134
L++E++ +G +S +L Q+ F + V+H+D
Sbjct: 78 APICLVFEFMEHGCLSDYL------RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD 131
Query: 135 FKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS-EVKEFRRFSEKSD 193
N LV E+ + KV+D G+ F+ D SS T + AS EV F R+S KSD
Sbjct: 132 LAARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 189
Query: 194 VYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLWSTFTNEGME 253
V+SFGV + E+ S E VE D S ++ RL ST
Sbjct: 190 VWSFGVLMWEVFS--EGKIPYENRSNSEVVE------DISTGFRLYKPRLASTHV----- 236
Query: 254 EFIQLIVRCLDPSSERRPSMSDVVTEL 280
Q++ C E RP+ S ++ +L
Sbjct: 237 --YQIMNHCWRERPEDRPAFSRLLRQL 261
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 129/295 (43%), Gaps = 41/295 (13%)
Query: 14 KNLIGEGKFGEVYKGLLQDG-----MLVAIKKRPGAPTQ----EFIDEVCFLASIQHRNL 64
+ +IG G+FGEVYKG+L+ + VAIK T+ +F+ E + H N+
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI 108
Query: 65 VTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQK-LEFKHRLSIXXXXXXXXXXX 123
+ L G + +I EY+ NG++ L R+K EF +
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFL-------REKDGEFSVLQLVGMLRGIAAGMK 161
Query: 124 XXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI---FLAS 180
VH+D N+LV+ + + KV+D GL L D + + +I + A
Sbjct: 162 YLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVL--EDDPEATYTTSGGKIPIRWTAP 219
Query: 181 EVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSN--LLKI 238
E +R+F+ SDV+SFG+ + E+++ E + + SN ++K
Sbjct: 220 EAISYRKFTSASDVWSFGIVMWEVMTYGE-----------------RPYWELSNHEVMKA 262
Query: 239 LDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLDKEMNLTTV 293
+++ + QL+++C RRP +D+V+ LD+ + +L T+
Sbjct: 263 INDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSLKTL 317
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 103/210 (49%), Gaps = 11/210 (5%)
Query: 1 MEELSLATKNFSDKNLIGEGKFGEVYKGLLQD-GMLVAIK--KRPGAPTQEFIDEVCFLA 57
+++ + + + K+ +G G++GEVY+G+ + + VA+K K +EF+ E +
Sbjct: 3 LDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 62
Query: 58 SIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXX 117
I+H NLV LLG C ++I E++ G++ +L + +RQ E + +
Sbjct: 63 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL---RECNRQ--EVSAVVLLYMATQ 117
Query: 118 XXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFL-GRTDVAGPSSQVTADEI 176
+H+D N LV E+ + KVAD GL + G T A ++
Sbjct: 118 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK-- 175
Query: 177 FLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
+ A E + +FS KSDV++FGV L E+ +
Sbjct: 176 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 105/217 (48%), Gaps = 24/217 (11%)
Query: 2 EELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIK---------KRPGAPTQEFIDE 52
+++ + + + K IG G FG V++ G VA+K +R EF+ E
Sbjct: 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAER----VNEFLRE 84
Query: 53 VCFLASIQHRNLVTLLG-YCQENNLQFLIYEYIPNGSVS--IHLYGPSQVSRQKLEFKHR 109
V + ++H N+V +G Q NL ++ EY+ GS+ +H G +R++L+ + R
Sbjct: 85 VAIMKRLRHPNIVLFMGAVTQPPNLS-IVTEYLSRGSLYRLLHKSG----AREQLDERRR 139
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSS 169
LS+ P +VH+D K+ N+LVD+ + KV D GL + +
Sbjct: 140 LSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXA 199
Query: 170 QVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
T + ++A EV +EKSDVYSFGV L EL +
Sbjct: 200 AGTPE--WMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 14 KNLIGEGKFGEVYKGLLQD-GMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGY 70
K+ +G G++GEVY+G+ + + VA+K K +EF+ E + I+H NLV LLG
Sbjct: 19 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 71 CQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV 130
C ++I E++ G++ +L + +RQ E + +
Sbjct: 79 CTREPPFYIIIEFMTYGNLLDYL---RECNRQ--EVNAVVLLYMATQISSAMEYLEKKNF 133
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLRNFL-GRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
+H+D N LV E+ + KVAD GL + G T A ++ + A E + +FS
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK--WTAPESLAYNKFS 191
Query: 190 EKSDVYSFGVFLLELVS 206
KSDV++FGV L E+ +
Sbjct: 192 IKSDVWAFGVLLWEIAT 208
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 14 KNLIGEGKFGEVYKGLLQD-GMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGY 70
K+ +G G++GEVY+G+ + + VA+K K +EF+ E + I+H NLV LLG
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 71 CQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV 130
C ++I E++ G++ +L + +RQ E + +
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYL---RECNRQ--EVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLRNFL-GRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
+H+D N LV E+ + KVAD GL + G T A ++ + A E + +FS
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK--WTAPESLAYNKFS 195
Query: 190 EKSDVYSFGVFLLELVS 206
KSDV++FGV L E+ +
Sbjct: 196 IKSDVWAFGVLLWEIAT 212
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 14 KNLIGEGKFGEVYKGLLQD-GMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGY 70
K+ +G G++GEVY+G+ + + VA+K K +EF+ E + I+H NLV LLG
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 71 CQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV 130
C ++I E++ G++ +L + +RQ E + +
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYL---RECNRQ--EVSAVVLLYMATQISSAMEYLEKKNF 137
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLRNFL-GRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
+H+D N LV E+ + KVAD GL + G T A ++ + A E + +FS
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK--WTAPESLAYNKFS 195
Query: 190 EKSDVYSFGVFLLELVS 206
KSDV++FGV L E+ +
Sbjct: 196 IKSDVWAFGVLLWEIAT 212
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 14 KNLIGEGKFGEVYKGLLQD-GMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGY 70
K+ +G G++GEVY+G+ + + VA+K K +EF+ E + I+H NLV LLG
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 71 CQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV 130
C ++I E++ G++ +L + +RQ E + +
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYL---RECNRQ--EVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLRNFL-GRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
+H+D N LV E+ + KVAD GL + G T A ++ + A E + +FS
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK--WTAPESLAYNKFS 190
Query: 190 EKSDVYSFGVFLLELVS 206
KSDV++FGV L E+ +
Sbjct: 191 IKSDVWAFGVLLWEIAT 207
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 14 KNLIGEGKFGEVYKGLLQD-GMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGY 70
K+ +G G++GEVY+G+ + + VA+K K +EF+ E + I+H NLV LLG
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 71 CQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV 130
C ++I E++ G++ +L + +RQ E + +
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYL---RECNRQ--EVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLRNFL-GRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
+H+D N LV E+ + KVAD GL + G T A ++ + A E + +FS
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK--WTAPESLAYNKFS 190
Query: 190 EKSDVYSFGVFLLELVS 206
KSDV++FGV L E+ +
Sbjct: 191 IKSDVWAFGVLLWEIAT 207
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 14 KNLIGEGKFGEVYKGLLQD-GMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGY 70
K+ +G G++GEVY+G+ + + VA+K K +EF+ E + I+H NLV LLG
Sbjct: 19 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 71 CQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV 130
C ++I E++ G++ +L + +RQ E + +
Sbjct: 79 CTREPPFYIITEFMTYGNLLDYL---RECNRQ--EVNAVVLLYMATQISSAMEYLEKKNF 133
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLRNFL-GRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
+H+D N LV E+ + KVAD GL + G T A ++ + A E + +FS
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK--WTAPESLAYNKFS 191
Query: 190 EKSDVYSFGVFLLELVS 206
KSDV++FGV L E+ +
Sbjct: 192 IKSDVWAFGVLLWEIAT 208
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 14 KNLIGEGKFGEVYKGLLQD-GMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGY 70
K+ +G G++GEVY+G+ + + VA+K K +EF+ E + I+H NLV LLG
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 71 CQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV 130
C ++I E++ G++ +L + +RQ E + +
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYL---RECNRQ--EVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLRNFL-GRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
+H+D N LV E+ + KVAD GL + G T A ++ + A E + +FS
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK--WTAPESLAYNKFS 195
Query: 190 EKSDVYSFGVFLLELVS 206
KSDV++FGV L E+ +
Sbjct: 196 IKSDVWAFGVLLWEIAT 212
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 14 KNLIGEGKFGEVYKGLLQD-GMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGY 70
K+ +G G++GEVY+G+ + + VA+K K +EF+ E + I+H NLV LLG
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 71 CQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV 130
C ++I E++ G++ +L + +RQ E + +
Sbjct: 83 CTREPPFYIIIEFMTYGNLLDYL---RECNRQ--EVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLRNFL-GRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
+H+D N LV E+ + KVAD GL + G T A ++ + A E + +FS
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK--WTAPESLAYNKFS 195
Query: 190 EKSDVYSFGVFLLELVS 206
KSDV++FGV L E+ +
Sbjct: 196 IKSDVWAFGVLLWEIAT 212
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 14 KNLIGEGKFGEVYKGLLQD-GMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGY 70
K+ +G G++GEVY+G+ + + VA+K K +EF+ E + I+H NLV LLG
Sbjct: 20 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 71 CQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV 130
C ++I E++ G++ +L + +RQ E + +
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYL---RECNRQ--EVNAVVLLYMATQISSAMEYLEKKNF 134
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLRNFL-GRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
+H+D N LV E+ + KVAD GL + G T A ++ + A E + +FS
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK--WTAPESLAYNKFS 192
Query: 190 EKSDVYSFGVFLLELVS 206
KSDV++FGV L E+ +
Sbjct: 193 IKSDVWAFGVLLWEIAT 209
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 14 KNLIGEGKFGEVYKGLLQD-GMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGY 70
K+ +G G++GEVY+G+ + + VA+K K +EF+ E + I+H NLV LLG
Sbjct: 20 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 71 CQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV 130
C ++I E++ G++ +L + +RQ E + +
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYL---RECNRQ--EVNAVVLLYMATQISSAMEYLEKKNF 134
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLRNFL-GRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
+H+D N LV E+ + KVAD GL + G T A ++ + A E + +FS
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK--WTAPESLAYNKFS 192
Query: 190 EKSDVYSFGVFLLELVS 206
KSDV++FGV L E+ +
Sbjct: 193 IKSDVWAFGVLLWEIAT 209
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 103/210 (49%), Gaps = 11/210 (5%)
Query: 1 MEELSLATKNFSDKNLIGEGKFGEVYKGLLQD-GMLVAIK--KRPGAPTQEFIDEVCFLA 57
+++ + + + K+ +G G++GEVY+G+ + + VA+K K +EF+ E +
Sbjct: 3 LDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 62
Query: 58 SIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXX 117
I+H NLV LLG C ++I E++ G++ +L + +RQ E + +
Sbjct: 63 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQ--EVSAVVLLYMATQ 117
Query: 118 XXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFL-GRTDVAGPSSQVTADEI 176
+H+D N LV E+ + KVAD GL + G T A ++
Sbjct: 118 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIK-- 175
Query: 177 FLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
+ A E + +FS KSDV++FGV L E+ +
Sbjct: 176 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 14 KNLIGEGKFGEVYKGLLQD-GMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGY 70
K+ +G G++GEVY+G+ + + VA+K K +EF+ E + I+H NLV LLG
Sbjct: 20 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 71 CQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV 130
C ++I E++ G++ +L + +RQ E + +
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYL---RECNRQ--EVNAVVLLYMATQISSAMEYLEKKNF 134
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLRNFL-GRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
+H+D N LV E+ + KVAD GL + G T A ++ + A E + +FS
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK--WTAPESLAYNKFS 192
Query: 190 EKSDVYSFGVFLLELVS 206
KSDV++FGV L E+ +
Sbjct: 193 IKSDVWAFGVLLWEIAT 209
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 14 KNLIGEGKFGEVYKGLLQD-GMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGY 70
K+ +G G++GEVY+G+ + + VA+K K +EF+ E + I+H NLV LLG
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 71 CQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV 130
C ++I E++ G++ +L + +RQ E + +
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYL---RECNRQ--EVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLRNFL-GRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
+H+D N LV E+ + KVAD GL + G T A ++ + A E + +FS
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK--WTAPESLAYNKFS 190
Query: 190 EKSDVYSFGVFLLELVS 206
KSDV++FGV L E+ +
Sbjct: 191 IKSDVWAFGVLLWEIAT 207
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 14 KNLIGEGKFGEVYKGLLQD-GMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGY 70
K+ +G G++GEVY+G+ + + VA+K K +EF+ E + I+H NLV LLG
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 71 CQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV 130
C ++I E++ G++ +L + +RQ E + +
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYL---RECNRQ--EVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLRNFL-GRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
+H+D N LV E+ + KVAD GL + G T A ++ + A E + +FS
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK--WTAPESLAYNKFS 195
Query: 190 EKSDVYSFGVFLLELVS 206
KSDV++FGV L E+ +
Sbjct: 196 IKSDVWAFGVLLWEIAT 212
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 14 KNLIGEGKFGEVYKGLLQD-GMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGY 70
K+ +G G++GEVY+G+ + + VA+K K +EF+ E + I+H NLV LLG
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 71 CQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV 130
C ++I E++ G++ +L + +RQ E + +
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYL---RECNRQ--EVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLRNFL-GRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
+H+D N LV E+ + KVAD GL + G T A ++ + A E + +FS
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK--WTAPESLAYNKFS 190
Query: 190 EKSDVYSFGVFLLELVS 206
KSDV++FGV L E+ +
Sbjct: 191 IKSDVWAFGVLLWEIAT 207
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 14 KNLIGEGKFGEVYKGLLQD-GMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGY 70
K+ +G G++GEVY+G+ + + VA+K K +EF+ E + I+H NLV LLG
Sbjct: 31 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 90
Query: 71 CQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV 130
C ++I E++ G++ +L + +RQ E + +
Sbjct: 91 CTREPPFYIITEFMTYGNLLDYL---RECNRQ--EVNAVVLLYMATQISSAMEYLEKKNF 145
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLRNFL-GRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
+H+D N LV E+ + KVAD GL + G T A ++ + A E + +FS
Sbjct: 146 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK--WTAPESLAYNKFS 203
Query: 190 EKSDVYSFGVFLLELVS 206
KSDV++FGV L E+ +
Sbjct: 204 IKSDVWAFGVLLWEIAT 220
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 14 KNLIGEGKFGEVYKGLLQD-GMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGY 70
K+ +G G++GEVY+G+ + + VA+K K +EF+ E + I+H NLV LLG
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 71 CQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV 130
C ++I E++ G++ +L + +RQ E + +
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYL---RECNRQ--EVNAVVLLYMATQISSAMEYLEKKNF 132
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLRNFL-GRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
+H+D N LV E+ + KVAD GL + G T A ++ + A E + +FS
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK--WTAPESLAYNKFS 190
Query: 190 EKSDVYSFGVFLLELVS 206
KSDV++FGV L E+ +
Sbjct: 191 IKSDVWAFGVLLWEIAT 207
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 14 KNLIGEGKFGEVYKGLLQD-GMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGY 70
K+ +G G++GEVY+G+ + + VA+K K +EF+ E + I+H NLV LLG
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 71 CQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV 130
C ++I E++ G++ +L + +RQ E + +
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYL---RECNRQ--EVNAVVLLYMATQISSAMEYLEKKNF 132
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLRNFL-GRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
+H+D N LV E+ + KVAD GL + G T A ++ + A E + +FS
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK--WTAPESLAYNKFS 190
Query: 190 EKSDVYSFGVFLLELVS 206
KSDV++FGV L E+ +
Sbjct: 191 IKSDVWAFGVLLWEIAT 207
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 14 KNLIGEGKFGEVYKGLLQD-GMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGY 70
K+ +G G++GEVY+G+ + + VA+K K +EF+ E + I+H NLV LLG
Sbjct: 22 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 81
Query: 71 CQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV 130
C ++I E++ G++ +L + +RQ E + +
Sbjct: 82 CTREPPFYIITEFMTYGNLLDYL---RECNRQ--EVNAVVLLYMATQISSAMEYLEKKNF 136
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLRNFL-GRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
+H+D N LV E+ + KVAD GL + G T A ++ + A E + +FS
Sbjct: 137 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK--WTAPESLAYNKFS 194
Query: 190 EKSDVYSFGVFLLELVS 206
KSDV++FGV L E+ +
Sbjct: 195 IKSDVWAFGVLLWEIAT 211
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 117/267 (43%), Gaps = 26/267 (9%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPTQE-FIDEVCFLASIQHRNLVTLLGYCQEN 74
IG G+FG V+ G + VAIK R GA ++E FI+E + + H LV L G C E
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 75
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKD 134
L+ E++ +G +S +L Q+ F + V+H+D
Sbjct: 76 APICLVTEFMEHGCLSDYL------RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD 129
Query: 135 FKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS-EVKEFRRFSEKSD 193
N LV E+ + KV+D G+ F+ D SS T + AS EV F R+S KSD
Sbjct: 130 LAARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 187
Query: 194 VYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLWSTFTNEGME 253
V+SFGV + E+ S E VE D S ++ RL ST
Sbjct: 188 VWSFGVLMWEVFS--EGKIPYENRSNSEVVE------DISTGFRLYKPRLASTHV----- 234
Query: 254 EFIQLIVRCLDPSSERRPSMSDVVTEL 280
Q++ C E RP+ S ++ +L
Sbjct: 235 --YQIMNHCWRERPEDRPAFSRLLRQL 259
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 114/267 (42%), Gaps = 26/267 (9%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGYCQEN 74
IG G+FG V+ G + VAIK K +FI+E + + H LV L G C E
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQ 94
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKD 134
L++E++ +G +S +L Q+ F + V+H+D
Sbjct: 95 APICLVFEFMEHGCLSDYL------RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD 148
Query: 135 FKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS-EVKEFRRFSEKSD 193
N LV E+ + KV+D G+ F+ D SS T + AS EV F R+S KSD
Sbjct: 149 LAARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 206
Query: 194 VYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLWSTFTNEGME 253
V+SFGV + E+ S E VE D S ++ RL ST
Sbjct: 207 VWSFGVLMWEVFS--EGKIPYENRSNSEVVE------DISTGFRLYKPRLASTHV----- 253
Query: 254 EFIQLIVRCLDPSSERRPSMSDVVTEL 280
Q++ C E RP+ S ++ +L
Sbjct: 254 --YQIMNHCWKERPEDRPAFSRLLRQL 278
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 14 KNLIGEGKFGEVYKGLLQD-GMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGY 70
K+ +G G++GEVY+G+ + + VA+K K +EF+ E + I+H NLV LLG
Sbjct: 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 71 CQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV 130
C ++I E++ G++ +L + +RQ E + +
Sbjct: 285 CTREPPFYIITEFMTYGNLLDYL---RECNRQ--EVSAVVLLYMATQISSAMEYLEKKNF 339
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLRNFL-GRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
+H++ N LV E+ + KVAD GL + G T A ++ + A E + +FS
Sbjct: 340 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK--WTAPESLAYNKFS 397
Query: 190 EKSDVYSFGVFLLELVS 206
KSDV++FGV L E+ +
Sbjct: 398 IKSDVWAFGVLLWEIAT 414
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 14 KNLIGEGKFGEVYKGLLQD-GMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGY 70
K+ +G G++GEVY+G+ + + VA+K K +EF+ E + I+H NLV LLG
Sbjct: 222 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 281
Query: 71 CQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV 130
C ++I E++ G++ +L + +RQ E + +
Sbjct: 282 CTREPPFYIITEFMTYGNLLDYL---RECNRQ--EVNAVVLLYMATQISSAMEYLEKKNF 336
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLRNFL-GRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
+H++ N LV E+ + KVAD GL + G T A ++ + A E + +FS
Sbjct: 337 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK--WTAPESLAYNKFS 394
Query: 190 EKSDVYSFGVFLLELVS 206
KSDV++FGV L E+ +
Sbjct: 395 IKSDVWAFGVLLWEIAT 411
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 119/275 (43%), Gaps = 32/275 (11%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKKRPGAPT----QEFIDEVCFLASIQHRNLVTLLGYCQ 72
IG G FG VYKG + V + APT Q F +EV L +H N++ +GY
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVT-APTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 78
Query: 73 ENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVH 132
+ L ++ ++ S+ HL+ S K E K + I ++H
Sbjct: 79 KPQLA-IVTQWCEGSSLYHHLHA----SETKFEMKKLIDIARQTARGMDYLHAKS--IIH 131
Query: 133 KDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEV---KEFRRFS 189
+D K+ N+ + ED K+ D GL R + Q++ +++A EV ++ +S
Sbjct: 132 RDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 191
Query: 190 EKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQN---SRDFSNLLKILDERLWST 246
+SDVY+FG+ L EL++G+ +E+V S D S + +R+
Sbjct: 192 FQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRM--- 246
Query: 247 FTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELD 281
+L+ CL + RPS ++ E++
Sbjct: 247 ---------KRLMAECLKKKRDERPSFPRILAEIE 272
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 14 KNLIGEGKFGEVYKGLLQD-GMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGY 70
K+ +G G++GEVY+G+ + + VA+K K +EF+ E + I+H NLV LLG
Sbjct: 264 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 323
Query: 71 CQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV 130
C ++I E++ G++ +L + +RQ E + +
Sbjct: 324 CTREPPFYIITEFMTYGNLLDYL---RECNRQ--EVNAVVLLYMATQISSAMEYLEKKNF 378
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLRNFL-GRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
+H++ N LV E+ + KVAD GL + G T A ++ + A E + +FS
Sbjct: 379 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK--WTAPESLAYNKFS 436
Query: 190 EKSDVYSFGVFLLELVS 206
KSDV++FGV L E+ +
Sbjct: 437 IKSDVWAFGVLLWEIAT 453
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 93/198 (46%), Gaps = 15/198 (7%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKKRPGAPT----QEFIDEVCFLASIQHRNLVTLLGYCQ 72
IG G FG VYKG + V I K PT Q F +EV L +H N++ +GY
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVD-PTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT 102
Query: 73 ENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVH 132
++NL ++ ++ S+ HL+ Q+ +F+ I ++H
Sbjct: 103 KDNLA-IVTQWCEGSSLYKHLH------VQETKFQMFQLIDIARQTAQGMDYLHAKNIIH 155
Query: 133 KDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEV---KEFRRFS 189
+D K+ N+ + E K+ D GL R + Q T +++A EV ++ FS
Sbjct: 156 RDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFS 215
Query: 190 EKSDVYSFGVFLLELVSG 207
+SDVYS+G+ L EL++G
Sbjct: 216 FQSDVYSYGIVLYELMTG 233
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 119/275 (43%), Gaps = 32/275 (11%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKKRPGAPT----QEFIDEVCFLASIQHRNLVTLLGYCQ 72
IG G FG VYKG + V + APT Q F +EV L +H N++ +GY
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVT-APTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 90
Query: 73 ENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVH 132
+ L ++ ++ S+ HL+ S K E K + I ++H
Sbjct: 91 KPQLA-IVTQWCEGSSLYHHLH----ASETKFEMKKLIDIARQTARGMDYLHAKS--IIH 143
Query: 133 KDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEV---KEFRRFS 189
+D K+ N+ + ED K+ D GL R + Q++ +++A EV ++ +S
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 203
Query: 190 EKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQN---SRDFSNLLKILDERLWST 246
+SDVY+FG+ L EL++G+ +E+V S D S + +R+
Sbjct: 204 FQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRM--- 258
Query: 247 FTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELD 281
+L+ CL + RPS ++ E++
Sbjct: 259 ---------KRLMAECLKKKRDERPSFPRILAEIE 284
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 118/275 (42%), Gaps = 32/275 (11%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKKRPGAPT----QEFIDEVCFLASIQHRNLVTLLGYCQ 72
IG G FG VYKG + V + APT Q F +EV L +H N++ +GY
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVT-APTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 90
Query: 73 ENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVH 132
L ++ ++ S+ HL+ S K E K + I ++H
Sbjct: 91 APQLA-IVTQWCEGSSLYHHLH----ASETKFEMKKLIDIARQTARGMDYLHAKS--IIH 143
Query: 133 KDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEV---KEFRRFS 189
+D K+ N+ + ED K+ D GL R + Q++ +++A EV ++ +S
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 203
Query: 190 EKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQN---SRDFSNLLKILDERLWST 246
+SDVY+FG+ L EL++G+ +E+V S D S + +R+
Sbjct: 204 FQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRM--- 258
Query: 247 FTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELD 281
+L+ CL + RPS ++ E++
Sbjct: 259 ---------KRLMAECLKKKRDERPSFPRILAEIE 284
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 96/207 (46%), Gaps = 28/207 (13%)
Query: 15 NLIGEGKFGEVYKGL-LQDG----MLVAIK-----KRPGAPTQEFIDEVCFLASIQHRNL 64
++G G FG VYKG+ + +G + VAIK P A EF+DE +AS+ H +L
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKA-NVEFMDEALIMASMDHPHL 102
Query: 65 VTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXX 124
V LLG C +Q L+ + +P+G + V K +L +
Sbjct: 103 VRLLGVCLSPTIQ-LVTQLMPHGCLL------EYVHEHKDNIGSQLLLNWCVQIAKGMMY 155
Query: 125 XXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE-----IFLA 179
R+VH+D NVLV K+ D GL L G + AD ++A
Sbjct: 156 LEERRLVHRDLAARNVLVKSPNHVKITDFGLARLL-----EGDEKEYNADGGKMPIKWMA 210
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVS 206
E +R+F+ +SDV+S+GV + EL++
Sbjct: 211 LECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 15/195 (7%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPTQE-FIDEVCFLASIQHRNLVTLLGYCQEN 74
+G+G FGEV+ G VAIK +PG + E F+ E + I+H LV L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSEE 85
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV--VH 132
+ +++ EY+ GS+ L G ++ RL R+ VH
Sbjct: 86 PI-YIVTEYMSKGSLLDFLKG-------EMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 133 KDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI-FLASEVKEFRRFSEK 191
+D + AN+LV E+ + KVAD GL + + + Q I + A E + RF+ K
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYT--ARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 192 SDVYSFGVFLLELVS 206
SDV+SFG+ L EL +
Sbjct: 196 SDVWSFGILLTELTT 210
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 96/206 (46%), Gaps = 28/206 (13%)
Query: 16 LIGEGKFGEVYKGL-LQDG----MLVAIK-----KRPGAPTQEFIDEVCFLASIQHRNLV 65
++G G FG VYKG+ + +G + VAIK P A EF+DE +AS+ H +LV
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKA-NVEFMDEALIMASMDHPHLV 80
Query: 66 TLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
LLG C +Q L+ + +P+G + V K +L +
Sbjct: 81 RLLGVCLSPTIQ-LVTQLMPHGCLL------EYVHEHKDNIGSQLLLNWCVQIAKGMMYL 133
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE-----IFLAS 180
R+VH+D NVLV K+ D GL L G + AD ++A
Sbjct: 134 EERRLVHRDLAARNVLVKSPNHVKITDFGLARLL-----EGDEKEYNADGGKMPIKWMAL 188
Query: 181 EVKEFRRFSEKSDVYSFGVFLLELVS 206
E +R+F+ +SDV+S+GV + EL++
Sbjct: 189 ECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 94/201 (46%), Gaps = 26/201 (12%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGA-PTQEFIDEVCFLASIQHRNLVTLLGYCQEN 74
+G G+FGEV+ G + VA+K +PG Q F++E + ++QH LV L
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTRE 80
Query: 75 NLQFLIYEYIPNGSVSIHLY---GPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVV 131
++I EY+ GS+ L G + + ++F +++ +
Sbjct: 81 EPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIA--------EGMAYIERKNYI 132
Query: 132 HKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE------IFLASEVKEF 185
H+D + ANVLV E + K+AD GL + ++ TA E + A E F
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVI-------EDNEYTAREGAKFPIKWTAPEAINF 185
Query: 186 RRFSEKSDVYSFGVFLLELVS 206
F+ KSDV+SFG+ L E+V+
Sbjct: 186 GCFTIKSDVWSFGILLYEIVT 206
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 15/195 (7%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPTQE-FIDEVCFLASIQHRNLVTLLGYCQEN 74
+G+G FGEV+ G VAIK +PG + E F+ E + ++H LV L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV--VH 132
+ +++ EY+ GS+ L G ++ RL R+ VH
Sbjct: 86 PI-YIVIEYMSKGSLLDFLKG-------EMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 133 KDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI-FLASEVKEFRRFSEK 191
+D + AN+LV E+ + KVAD GL + D + Q I + A E + RF+ K
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLI--EDNEXTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 192 SDVYSFGVFLLELVS 206
SDV+SFG+ L EL +
Sbjct: 196 SDVWSFGILLTELTT 210
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 91/193 (47%), Gaps = 11/193 (5%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPTQE-FIDEVCFLASIQHRNLVTLLGYCQEN 74
+G+G FGEV+ G VAIK +PG + E F+ E + ++H LV L E
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 82
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKD 134
+ +++ EY+ GS+ L G + + L + + VH+D
Sbjct: 83 PI-YIVTEYMNKGSLLDFLKGETG---KYLRLPQLVDMSAQIASGMAYVERM--NYVHRD 136
Query: 135 FKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI-FLASEVKEFRRFSEKSD 193
+ AN+LV E+ + KVAD GL + D + Q I + A E + RF+ KSD
Sbjct: 137 LRAANILVGENLVCKVADFGLARLI--EDNEWTARQGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 194 VYSFGVFLLELVS 206
V+SFG+ L EL +
Sbjct: 195 VWSFGILLTELTT 207
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 17 IGEGKFGEVY----KGLL--QDGMLVAIKKRPGA---PTQEFIDEVCFLASIQHRNLVTL 67
+GEG FG+V+ LL QD MLVA+K A Q+F E L +QH+++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 68 LGYCQENNLQFLIYEYIPNGSVSIHL--YGPSQ--------VSRQKLEFKHRLSIXXXXX 117
G C E +++EY+ +G ++ L +GP V+ L L++
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 118 XXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIF 177
VH+D T N LV + + K+ D G+ + TD + +
Sbjct: 146 AGMVYLAGL--HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRW 203
Query: 178 LASEVKEFRRFSEKSDVYSFGVFLLELVS 206
+ E +R+F+ +SDV+SFGV L E+ +
Sbjct: 204 MPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 92/212 (43%), Gaps = 15/212 (7%)
Query: 10 NFSDKNLIGEGKFGEVYKGLL------QDGMLVAIKKRPGA---PTQEFIDEVCFLASIQ 60
N K +GEG FG+V+ QD +LVA+K A ++F E L ++Q
Sbjct: 14 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ 73
Query: 61 HRNLVTLLGYCQENNLQFLIYEYIPNGSVS--IHLYGPSQV----SRQKLEFKHRLSIXX 114
H ++V G C E + +++EY+ +G ++ + +GP V E +
Sbjct: 74 HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHI 133
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTAD 174
VH+D T N LV E+ + K+ D G+ + TD
Sbjct: 134 AQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 193
Query: 175 EIFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++ E +R+F+ +SDV+S GV L E+ +
Sbjct: 194 IRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 17 IGEGKFGEVY----KGLL--QDGMLVAIKKRPGA---PTQEFIDEVCFLASIQHRNLVTL 67
+GEG FG+V+ LL QD MLVA+K A Q+F E L +QH+++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 68 LGYCQENNLQFLIYEYIPNGSVSIHL--YGPSQ--------VSRQKLEFKHRLSIXXXXX 117
G C E +++EY+ +G ++ L +GP V+ L L++
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 118 XXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIF 177
VH+D T N LV + + K+ D G+ + TD + +
Sbjct: 140 AGMVYLAGL--HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRW 197
Query: 178 LASEVKEFRRFSEKSDVYSFGVFLLELVS 206
+ E +R+F+ +SDV+SFGV L E+ +
Sbjct: 198 MPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 91/193 (47%), Gaps = 11/193 (5%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPTQE-FIDEVCFLASIQHRNLVTLLGYCQEN 74
+G+G FGEV+ G VAIK +PG + E F+ E + ++H LV L E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 251
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKD 134
+ +++ EY+ GS+ L G + + L + + VH+D
Sbjct: 252 PI-YIVTEYMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVERM--NYVHRD 305
Query: 135 FKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI-FLASEVKEFRRFSEKSD 193
+ AN+LV E+ + KVAD GL + D + Q I + A E + RF+ KSD
Sbjct: 306 LRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 194 VYSFGVFLLELVS 206
V+SFG+ L EL +
Sbjct: 364 VWSFGILLTELTT 376
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 11/193 (5%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPTQE-FIDEVCFLASIQHRNLVTLLGYCQEN 74
+G+G FGEV+ G VAIK +PG + E F+ E + ++H LV L E
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 78
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKD 134
+ +++ EY+ GS+ L G + + L + + VH+D
Sbjct: 79 PI-YIVTEYMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVERM--NYVHRD 132
Query: 135 FKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI-FLASEVKEFRRFSEKSD 193
+ AN+LV E+ + KVAD GL + + + Q I + A E + RF+ KSD
Sbjct: 133 LRAANILVGENLVCKVADFGLARLIEDNEYT--ARQGAKFPIKWTAPEAALYGRFTIKSD 190
Query: 194 VYSFGVFLLELVS 206
V+SFG+ L EL +
Sbjct: 191 VWSFGILLTELTT 203
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 91/193 (47%), Gaps = 11/193 (5%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPTQE-FIDEVCFLASIQHRNLVTLLGYCQEN 74
+G+G FGEV+ G VAIK +PG + E F+ E + ++H LV L E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 251
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKD 134
+ +++ EY+ GS+ L G + + L + + VH+D
Sbjct: 252 PI-YIVTEYMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVERM--NYVHRD 305
Query: 135 FKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI-FLASEVKEFRRFSEKSD 193
+ AN+LV E+ + KVAD GL + D + Q I + A E + RF+ KSD
Sbjct: 306 LRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 194 VYSFGVFLLELVS 206
V+SFG+ L EL +
Sbjct: 364 VWSFGILLTELTT 376
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 17 IGEGKFGEVY----KGLL--QDGMLVAIKKRPGA---PTQEFIDEVCFLASIQHRNLVTL 67
+GEG FG+V+ LL QD MLVA+K A Q+F E L +QH+++V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 68 LGYCQENNLQFLIYEYIPNGSVSIHL--YGPSQ--------VSRQKLEFKHRLSIXXXXX 117
G C E +++EY+ +G ++ L +GP V+ L L++
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 118 XXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIF 177
VH+D T N LV + + K+ D G+ + TD + +
Sbjct: 169 AGMVYLAGL--HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRW 226
Query: 178 LASEVKEFRRFSEKSDVYSFGVFLLELVS 206
+ E +R+F+ +SDV+SFGV L E+ +
Sbjct: 227 MPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 14 KNLIGEGKFGEVYKGLL------QDGMLVAIK--KRPG-APTQEFIDEVCFLASIQHRNL 64
K +GEG FG+V+ +D MLVA+K K P A ++F E L ++QH ++
Sbjct: 20 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 79
Query: 65 VTLLGYCQENNLQFLIYEYIPNGSVS--IHLYGP-------SQVSRQKLEFKHRLSIXXX 115
V G C + + +++EY+ +G ++ + +GP Q + K E +
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
VH+D T N LV + + K+ D G+ + TD
Sbjct: 140 SQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 199
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++ E +R+F+ +SDV+SFGV L E+ +
Sbjct: 200 RWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 92/195 (47%), Gaps = 15/195 (7%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPTQE-FIDEVCFLASIQHRNLVTLLGYCQEN 74
+G+G FGEV+ G VAIK +PG + E F+ E + ++H LV L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV--VH 132
+ +++ EY+ GS+ L G ++ RL R+ VH
Sbjct: 86 PI-YIVCEYMSKGSLLDFLKG-------EMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 133 KDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI-FLASEVKEFRRFSEK 191
+D + AN+LV E+ + KVAD GL + + + Q I + A E + RF+ K
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYT--ARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 192 SDVYSFGVFLLELVS 206
SDV+SFG+ L EL +
Sbjct: 196 SDVWSFGILLTELTT 210
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 92/195 (47%), Gaps = 15/195 (7%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPTQE-FIDEVCFLASIQHRNLVTLLGYCQEN 74
+G+G FGEV+ G VAIK +PG + E F+ E + ++H LV L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV--VH 132
+ +++ EY+ GS+ L G ++ RL R+ VH
Sbjct: 86 PI-YIVTEYMSKGSLLDFLKG-------EMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 133 KDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI-FLASEVKEFRRFSEK 191
+D + AN+LV E+ + KVAD GL + + + Q I + A E + RF+ K
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYT--ARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 192 SDVYSFGVFLLELVS 206
SDV+SFG+ L EL +
Sbjct: 196 SDVWSFGILLTELTT 210
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 92/195 (47%), Gaps = 15/195 (7%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPTQE-FIDEVCFLASIQHRNLVTLLGYCQEN 74
+G+G FGEV+ G VAIK +PG + E F+ E + ++H LV L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV--VH 132
+ +++ EY+ GS+ L G ++ RL R+ VH
Sbjct: 86 PI-YIVIEYMSKGSLLDFLKG-------EMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 133 KDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI-FLASEVKEFRRFSEK 191
+D + AN+LV E+ + KVAD GL + + + Q I + A E + RF+ K
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYT--ARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 192 SDVYSFGVFLLELVS 206
SDV+SFG+ L EL +
Sbjct: 196 SDVWSFGILLTELTT 210
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 92/195 (47%), Gaps = 15/195 (7%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPTQE-FIDEVCFLASIQHRNLVTLLGYCQEN 74
+G+G FGEV+ G VAIK +PG + E F+ E + ++H LV L E
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 74
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV--VH 132
+ +++ EY+ GS+ L G ++ RL R+ VH
Sbjct: 75 PI-YIVTEYMSKGSLLDFLKG-------EMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 126
Query: 133 KDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI-FLASEVKEFRRFSEK 191
+D + AN+LV E+ + KVAD GL + + + Q I + A E + RF+ K
Sbjct: 127 RDLRAANILVGENLVCKVADFGLARLIEDNEYT--ARQGAKFPIKWTAPEAALYGRFTIK 184
Query: 192 SDVYSFGVFLLELVS 206
SDV+SFG+ L EL +
Sbjct: 185 SDVWSFGILLTELTT 199
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 92/195 (47%), Gaps = 15/195 (7%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPTQE-FIDEVCFLASIQHRNLVTLLGYCQEN 74
+G+G FGEV+ G VAIK +PG + E F+ E + ++H LV L E
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 76
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV--VH 132
+ +++ EY+ GS+ L G ++ RL R+ VH
Sbjct: 77 PI-YIVTEYMSKGSLLDFLKG-------EMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 128
Query: 133 KDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI-FLASEVKEFRRFSEK 191
+D + AN+LV E+ + KVAD GL + + + Q I + A E + RF+ K
Sbjct: 129 RDLRAANILVGENLVCKVADFGLARLIEDNEYT--ARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 192 SDVYSFGVFLLELVS 206
SDV+SFG+ L EL +
Sbjct: 187 SDVWSFGILLTELTT 201
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPT----QEFIDEVCFLASIQHRNLVTLLGYC 71
IG G FG VYKG VA+K APT Q F +EV L +H N++ +GY
Sbjct: 18 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 72 QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVV 131
+ L ++ ++ S+ HL+ + K E + I ++
Sbjct: 76 TKPQLA-IVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLHAKS--II 128
Query: 132 HKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEV---KEFRRF 188
H+D K+ N+ + ED K+ D GL R + Q++ +++A EV ++ +
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 188
Query: 189 SEKSDVYSFGVFLLELVSGR 208
S +SDVY+FG+ L EL++G+
Sbjct: 189 SFQSDVYAFGIVLYELMTGQ 208
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 11/193 (5%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPTQE-FIDEVCFLASIQHRNLVTLLGYCQEN 74
+G+G FGEV+ G VAIK +PG + E F+ E + ++H LV L E
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 334
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKD 134
+ +++ EY+ GS+ L G + + L + + VH+D
Sbjct: 335 PI-YIVTEYMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVERM--NYVHRD 388
Query: 135 FKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI-FLASEVKEFRRFSEKSD 193
+ AN+LV E+ + KVAD GL + + + Q I + A E + RF+ KSD
Sbjct: 389 LRAANILVGENLVCKVADFGLARLIEDNEYT--ARQGAKFPIKWTAPEAALYGRFTIKSD 446
Query: 194 VYSFGVFLLELVS 206
V+SFG+ L EL +
Sbjct: 447 VWSFGILLTELTT 459
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 91/193 (47%), Gaps = 11/193 (5%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPTQE-FIDEVCFLASIQHRNLVTLLGYCQEN 74
+G+G FGEV+ G VAIK +PG + E F+ E + ++H LV L E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 251
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKD 134
+ +++ EY+ GS+ L G + + L + + VH+D
Sbjct: 252 PI-YIVGEYMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVERM--NYVHRD 305
Query: 135 FKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI-FLASEVKEFRRFSEKSD 193
+ AN+LV E+ + KVAD GL + D + Q I + A E + RF+ KSD
Sbjct: 306 LRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 194 VYSFGVFLLELVS 206
V+SFG+ L EL +
Sbjct: 364 VWSFGILLTELTT 376
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPT----QEFIDEVCFLASIQHRNLVTLLGYC 71
IG G FG VYKG VA+K APT Q F +EV L +H N++ +GY
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 72 QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVV 131
+ L ++ ++ S+ HL+ + K E + I ++
Sbjct: 79 TKPQLA-IVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLHAKS--II 131
Query: 132 HKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEV---KEFRRF 188
H+D K+ N+ + ED K+ D GL R + Q++ +++A EV ++ +
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 189 SEKSDVYSFGVFLLELVSGR 208
S +SDVY+FG+ L EL++G+
Sbjct: 192 SFQSDVYAFGIVLYELMTGQ 211
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPT----QEFIDEVCFLASIQHRNLVTLLGYC 71
IG G FG VYKG VA+K APT Q F +EV L +H N++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 72 QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVV 131
+ L ++ ++ S+ HL+ + K E + I ++
Sbjct: 74 TKPQLA-IVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLHAKS--II 126
Query: 132 HKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEV---KEFRRF 188
H+D K+ N+ + ED K+ D GL R + Q++ +++A EV ++ +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 189 SEKSDVYSFGVFLLELVSGR 208
S +SDVY+FG+ L EL++G+
Sbjct: 187 SFQSDVYAFGIVLYELMTGQ 206
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPT----QEFIDEVCFLASIQHRNLVTLLGYC 71
IG G FG VYKG VA+K APT Q F +EV L +H N++ +GY
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 72 QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVV 131
+ L ++ ++ S+ HL+ + K E + I ++
Sbjct: 102 TKPQLA-IVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLHAKS--II 154
Query: 132 HKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEV---KEFRRF 188
H+D K+ N+ + ED K+ D GL R + Q++ +++A EV ++ +
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 189 SEKSDVYSFGVFLLELVSGR 208
S +SDVY+FG+ L EL++G+
Sbjct: 215 SFQSDVYAFGIVLYELMTGQ 234
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPT----QEFIDEVCFLASIQHRNLVTLLGYC 71
IG G FG VYKG VA+K APT Q F +EV L +H N++ +GY
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 72 QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVV 131
+ L ++ ++ S+ HL+ + K E + I ++
Sbjct: 79 TKPQLA-IVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLHAKS--II 131
Query: 132 HKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEV---KEFRRF 188
H+D K+ N+ + ED K+ D GL R + Q++ +++A EV ++ +
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 189 SEKSDVYSFGVFLLELVSGR 208
S +SDVY+FG+ L EL++G+
Sbjct: 192 SFQSDVYAFGIVLYELMTGQ 211
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 11/193 (5%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPTQE-FIDEVCFLASIQHRNLVTLLGYCQEN 74
+G+G FGEV+ G VAIK +PG + E F+ E + ++H LV L E
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 82
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKD 134
+ +++ EY+ GS+ L G + + L + + VH+D
Sbjct: 83 PI-YIVTEYMNKGSLLDFLKGETG---KYLRLPQLVDMSAQIASGMAYVERM--NYVHRD 136
Query: 135 FKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI-FLASEVKEFRRFSEKSD 193
+ AN+LV E+ + KVAD GL + + + Q I + A E + RF+ KSD
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNEYT--ARQGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 194 VYSFGVFLLELVS 206
V+SFG+ L EL +
Sbjct: 195 VWSFGILLTELTT 207
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPT----QEFIDEVCFLASIQHRNLVTLLGYC 71
IG G FG VYKG VA+K APT Q F +EV L +H N++ +GY
Sbjct: 43 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 72 QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVV 131
+ L ++ ++ S+ HL+ + K E + I ++
Sbjct: 101 TKPQLA-IVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLHAKS--II 153
Query: 132 HKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEV---KEFRRF 188
H+D K+ N+ + ED K+ D GL R + Q++ +++A EV ++ +
Sbjct: 154 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 213
Query: 189 SEKSDVYSFGVFLLELVSGR 208
S +SDVY+FG+ L EL++G+
Sbjct: 214 SFQSDVYAFGIVLYELMTGQ 233
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 111/265 (41%), Gaps = 38/265 (14%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGYCQEN 74
+G G+FGEV+ G VA+K K+ F+ E + +QH+ LV L +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 85
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKD 134
+ ++I EY+ NGS+ L PS + KL L + +H+D
Sbjct: 86 PI-YIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER--NYIHRD 139
Query: 135 FKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE------IFLASEVKEFRRF 188
+ AN+LV + K+AD GL + ++ TA E + A E + F
Sbjct: 140 LRAANILVSDTLSCKIADFGLARLIE-------DNEYTAREGAKFPIKWTAPEAINYGTF 192
Query: 189 SEKSDVYSFGVFLLELVS-GREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLWSTF 247
+ KSDV+SFG+ L E+V+ GR E++QN +++
Sbjct: 193 TIKSDVWSFGILLTEIVTHGR------IPYPGMTNPEVIQNLERGYRMVR---------- 236
Query: 248 TNEGMEEFIQLIVRCLDPSSERRPS 272
+ EE QL+ C E RP+
Sbjct: 237 PDNCPEELYQLMRLCWKERPEDRPT 261
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 111/265 (41%), Gaps = 38/265 (14%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGYCQEN 74
+G G+FGEV+ G VA+K K+ F+ E + +QH+ LV L +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 88
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKD 134
+ ++I EY+ NGS+ L PS + KL L + +H+D
Sbjct: 89 PI-YIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER--NYIHRD 142
Query: 135 FKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE------IFLASEVKEFRRF 188
+ AN+LV + K+AD GL + ++ TA E + A E + F
Sbjct: 143 LRAANILVSDTLSCKIADFGLARLIE-------DNEXTAREGAKFPIKWTAPEAINYGTF 195
Query: 189 SEKSDVYSFGVFLLELVS-GREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLWSTF 247
+ KSDV+SFG+ L E+V+ GR E++QN +++
Sbjct: 196 TIKSDVWSFGILLTEIVTHGR------IPYPGMTNPEVIQNLERGYRMVR---------- 239
Query: 248 TNEGMEEFIQLIVRCLDPSSERRPS 272
+ EE QL+ C E RP+
Sbjct: 240 PDNCPEELYQLMRLCWKERPEDRPT 264
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 111/265 (41%), Gaps = 38/265 (14%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGYCQEN 74
+G G+FGEV+ G VA+K K+ F+ E + +QH+ LV L +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 86
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKD 134
+ ++I EY+ NGS+ L PS + KL L + +H+D
Sbjct: 87 PI-YIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER--NYIHRD 140
Query: 135 FKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE------IFLASEVKEFRRF 188
+ AN+LV + K+AD GL + ++ TA E + A E + F
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIE-------DNEYTAREGAKFPIKWTAPEAINYGTF 193
Query: 189 SEKSDVYSFGVFLLELVS-GREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLWSTF 247
+ KSDV+SFG+ L E+V+ GR E++QN +++
Sbjct: 194 TIKSDVWSFGILLTEIVTHGR------IPYPGMTNPEVIQNLERGYRMVR---------- 237
Query: 248 TNEGMEEFIQLIVRCLDPSSERRPS 272
+ EE QL+ C E RP+
Sbjct: 238 PDNCPEELYQLMRLCWKERPEDRPT 262
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 111/265 (41%), Gaps = 38/265 (14%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGYCQEN 74
+G G+FGEV+ G VA+K K+ F+ E + +QH+ LV L +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 89
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKD 134
+ ++I EY+ NGS+ L PS + KL L + +H+D
Sbjct: 90 PI-YIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER--NYIHRD 143
Query: 135 FKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE------IFLASEVKEFRRF 188
+ AN+LV + K+AD GL + ++ TA E + A E + F
Sbjct: 144 LRAANILVSDTLSCKIADFGLARLIE-------DNEXTAREGAKFPIKWTAPEAINYGTF 196
Query: 189 SEKSDVYSFGVFLLELVS-GREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLWSTF 247
+ KSDV+SFG+ L E+V+ GR E++QN +++
Sbjct: 197 TIKSDVWSFGILLTEIVTHGR------IPYPGMTNPEVIQNLERGYRMVR---------- 240
Query: 248 TNEGMEEFIQLIVRCLDPSSERRPS 272
+ EE QL+ C E RP+
Sbjct: 241 PDNCPEELYQLMRLCWKERPEDRPT 265
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 111/265 (41%), Gaps = 38/265 (14%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGYCQEN 74
+G G+FGEV+ G VA+K K+ F+ E + +QH+ LV L +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 90
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKD 134
+ ++I EY+ NGS+ L PS + KL L + +H+D
Sbjct: 91 PI-YIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER--NYIHRD 144
Query: 135 FKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE------IFLASEVKEFRRF 188
+ AN+LV + K+AD GL + ++ TA E + A E + F
Sbjct: 145 LRAANILVSDTLSCKIADFGLARLIE-------DNEYTAREGAKFPIKWTAPEAINYGTF 197
Query: 189 SEKSDVYSFGVFLLELVS-GREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLWSTF 247
+ KSDV+SFG+ L E+V+ GR E++QN +++
Sbjct: 198 TIKSDVWSFGILLTEIVTHGR------IPYPGMTNPEVIQNLERGYRMVR---------- 241
Query: 248 TNEGMEEFIQLIVRCLDPSSERRPS 272
+ EE QL+ C E RP+
Sbjct: 242 PDNCPEELYQLMRLCWKERPEDRPT 266
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 111/265 (41%), Gaps = 38/265 (14%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGYCQEN 74
+G G+FGEV+ G VA+K K+ F+ E + +QH+ LV L +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 82
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKD 134
+ ++I EY+ NGS+ L PS + KL L + +H+D
Sbjct: 83 PI-YIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER--NYIHRD 136
Query: 135 FKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE------IFLASEVKEFRRF 188
+ AN+LV + K+AD GL + ++ TA E + A E + F
Sbjct: 137 LRAANILVSDTLSCKIADFGLARLIE-------DNEXTAREGAKFPIKWTAPEAINYGTF 189
Query: 189 SEKSDVYSFGVFLLELVS-GREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLWSTF 247
+ KSDV+SFG+ L E+V+ GR E++QN +++
Sbjct: 190 TIKSDVWSFGILLTEIVTHGR------IPYPGMTNPEVIQNLERGYRMVR---------- 233
Query: 248 TNEGMEEFIQLIVRCLDPSSERRPS 272
+ EE QL+ C E RP+
Sbjct: 234 PDNCPEELYQLMRLCWKERPEDRPT 258
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 111/265 (41%), Gaps = 38/265 (14%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGYCQEN 74
+G G+FGEV+ G VA+K K+ F+ E + +QH+ LV L +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKD 134
+ ++I EY+ NGS+ L PS + KL L + +H+D
Sbjct: 81 PI-YIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER--NYIHRD 134
Query: 135 FKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE------IFLASEVKEFRRF 188
+ AN+LV + K+AD GL + ++ TA E + A E + F
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIE-------DNEXTAREGAKFPIKWTAPEAINYGTF 187
Query: 189 SEKSDVYSFGVFLLELVS-GREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLWSTF 247
+ KSDV+SFG+ L E+V+ GR E++QN +++
Sbjct: 188 TIKSDVWSFGILLTEIVTHGR------IPYPGMTNPEVIQNLERGYRMVR---------- 231
Query: 248 TNEGMEEFIQLIVRCLDPSSERRPS 272
+ EE QL+ C E RP+
Sbjct: 232 PDNCPEELYQLMRLCWKERPEDRPT 256
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 111/265 (41%), Gaps = 38/265 (14%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGYCQEN 74
+G G+FGEV+ G VA+K K+ F+ E + +QH+ LV L +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKD 134
+ ++I EY+ NGS+ L PS + KL L + +H+D
Sbjct: 81 PI-YIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER--NYIHRD 134
Query: 135 FKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE------IFLASEVKEFRRF 188
+ AN+LV + K+AD GL + ++ TA E + A E + F
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLI-------EDNEXTAREGAKFPIKWTAPEAINYGTF 187
Query: 189 SEKSDVYSFGVFLLELVS-GREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLWSTF 247
+ KSDV+SFG+ L E+V+ GR E++QN +++
Sbjct: 188 TIKSDVWSFGILLTEIVTHGR------IPYPGMTNPEVIQNLERGYRMVR---------- 231
Query: 248 TNEGMEEFIQLIVRCLDPSSERRPS 272
+ EE QL+ C E RP+
Sbjct: 232 PDNCPEELYQLMRLCWKERPEDRPT 256
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 111/265 (41%), Gaps = 38/265 (14%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGYCQEN 74
+G G+FGEV+ G VA+K K+ F+ E + +QH+ LV L +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKD 134
+ ++I EY+ NGS+ L PS + KL L + +H+D
Sbjct: 81 PI-YIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER--NYIHRD 134
Query: 135 FKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE------IFLASEVKEFRRF 188
+ AN+LV + K+AD GL + ++ TA E + A E + F
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLI-------EDNEYTAREGAKFPIKWTAPEAINYGTF 187
Query: 189 SEKSDVYSFGVFLLELVS-GREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLWSTF 247
+ KSDV+SFG+ L E+V+ GR E++QN +++
Sbjct: 188 TIKSDVWSFGILLTEIVTHGR------IPYPGMTNPEVIQNLERGYRMVR---------- 231
Query: 248 TNEGMEEFIQLIVRCLDPSSERRPS 272
+ EE QL+ C E RP+
Sbjct: 232 PDNCPEELYQLMRLCWKERPEDRPT 256
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 111/265 (41%), Gaps = 38/265 (14%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGYCQEN 74
+G G+FGEV+ G VA+K K+ F+ E + +QH+ LV L +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 86
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKD 134
+ ++I EY+ NGS+ L PS + KL L + +H+D
Sbjct: 87 PI-YIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER--NYIHRD 140
Query: 135 FKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE------IFLASEVKEFRRF 188
+ AN+LV + K+AD GL + ++ TA E + A E + F
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIE-------DNEXTAREGAKFPIKWTAPEAINYGTF 193
Query: 189 SEKSDVYSFGVFLLELVS-GREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLWSTF 247
+ KSDV+SFG+ L E+V+ GR E++QN +++
Sbjct: 194 TIKSDVWSFGILLTEIVTHGR------IPYPGMTNPEVIQNLERGYRMVR---------- 237
Query: 248 TNEGMEEFIQLIVRCLDPSSERRPS 272
+ EE QL+ C E RP+
Sbjct: 238 PDNCPEELYQLMRLCWKERPEDRPT 262
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 111/265 (41%), Gaps = 38/265 (14%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGYCQEN 74
+G G+FGEV+ G VA+K K+ F+ E + +QH+ LV L +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 81
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKD 134
+ ++I EY+ NGS+ L PS + KL L + +H+D
Sbjct: 82 PI-YIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER--NYIHRD 135
Query: 135 FKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE------IFLASEVKEFRRF 188
+ AN+LV + K+AD GL + ++ TA E + A E + F
Sbjct: 136 LRAANILVSDTLSCKIADFGLARLI-------EDNEXTAREGAKFPIKWTAPEAINYGTF 188
Query: 189 SEKSDVYSFGVFLLELVS-GREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLWSTF 247
+ KSDV+SFG+ L E+V+ GR E++QN +++
Sbjct: 189 TIKSDVWSFGILLTEIVTHGR------IPYPGMTNPEVIQNLERGYRMVR---------- 232
Query: 248 TNEGMEEFIQLIVRCLDPSSERRPS 272
+ EE QL+ C E RP+
Sbjct: 233 PDNCPEELYQLMRLCWKERPEDRPT 257
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 17/200 (8%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPT----QEFIDEVCFLASIQHRNLVTLLGYC 71
IG G FG VYKG VA+K APT Q F +EV L +H N++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 72 QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVV 131
L ++ ++ S+ HL+ + K E + I ++
Sbjct: 74 TAPQLA-IVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLHAKS--II 126
Query: 132 HKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEV---KEFRRF 188
H+D K+ N+ + ED K+ D GL R + Q++ +++A EV ++ +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 189 SEKSDVYSFGVFLLELVSGR 208
S +SDVY+FG+ L EL++G+
Sbjct: 187 SFQSDVYAFGIVLYELMTGQ 206
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 90/193 (46%), Gaps = 11/193 (5%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPTQE-FIDEVCFLASIQHRNLVTLLGYCQEN 74
+G+G FGEV+ G VAIK +PG + E F+ E + ++H LV L E
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 75
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKD 134
+ ++ EY+ GS+ L G + + L + + VH+D
Sbjct: 76 PIX-IVTEYMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVERM--NYVHRD 129
Query: 135 FKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI-FLASEVKEFRRFSEKSD 193
+ AN+LV E+ + KVAD GL + D + Q I + A E + RF+ KSD
Sbjct: 130 LRAANILVGENLVCKVADFGLARLI--EDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 187
Query: 194 VYSFGVFLLELVS 206
V+SFG+ L EL +
Sbjct: 188 VWSFGILLTELTT 200
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 91/195 (46%), Gaps = 15/195 (7%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPTQE-FIDEVCFLASIQHRNLVTLLGYCQEN 74
+G+G FGEV+ G VAIK +PG + E F+ E + ++H LV L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV--VH 132
+ +++ EY+ GS+ L G ++ RL R+ VH
Sbjct: 86 PI-YIVTEYMSKGSLLDFLKG-------EMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 133 KDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI-FLASEVKEFRRFSEK 191
+D AN+LV E+ + KVAD GL + + + Q I + A E + RF+ K
Sbjct: 138 RDLAAANILVGENLVCKVADFGLARLIEDNEYT--ARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 192 SDVYSFGVFLLELVS 206
SDV+SFG+ L EL +
Sbjct: 196 SDVWSFGILLTELTT 210
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 111/265 (41%), Gaps = 38/265 (14%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGYCQEN 74
+G G+FGEV+ G VA+K K+ F+ E + +QH+ LV L +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 75
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKD 134
+ ++I EY+ NGS+ L PS + KL L + +H+D
Sbjct: 76 PI-YIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER--NYIHRD 129
Query: 135 FKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE------IFLASEVKEFRRF 188
+ AN+LV + K+AD GL + ++ TA E + A E + F
Sbjct: 130 LRAANILVSDTLSCKIADFGLARLI-------EDNEYTAREGAKFPIKWTAPEAINYGTF 182
Query: 189 SEKSDVYSFGVFLLELVS-GREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLWSTF 247
+ KSDV+SFG+ L E+V+ GR E++QN +++
Sbjct: 183 TIKSDVWSFGILLTEIVTHGR------IPYPGMTNPEVIQNLERGYRMVR---------- 226
Query: 248 TNEGMEEFIQLIVRCLDPSSERRPS 272
+ EE QL+ C E RP+
Sbjct: 227 PDNCPEELYQLMRLCWKERPEDRPT 251
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 15/195 (7%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPTQE-FIDEVCFLASIQHRNLVTLLGYCQEN 74
+G+G FGEV+ G VAIK +PG + E F+ E + ++H LV L E
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 252
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV--VH 132
+ +++ EY+ GS+ L G ++ RL R+ VH
Sbjct: 253 PI-YIVTEYMSKGSLLDFLKG-------EMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 304
Query: 133 KDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI-FLASEVKEFRRFSEK 191
+D + AN+LV E+ + KVAD GL + D + Q I + A E + RF+ K
Sbjct: 305 RDLRAANILVGENLVCKVADFGLGRLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIK 362
Query: 192 SDVYSFGVFLLELVS 206
SDV+SFG+ L EL +
Sbjct: 363 SDVWSFGILLTELTT 377
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPT----QEFIDEVCFLASIQHRNLVTLLGYC 71
IG G FG VYKG VA+K APT Q F +EV L +H N++ +GY
Sbjct: 36 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 72 QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVV 131
+ L ++ ++ S+ HL+ + K E + I ++
Sbjct: 94 TKPQLA-IVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLHAKS--II 146
Query: 132 HKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEV---KEFRRF 188
H+D K+ N+ + ED K+ D GL R + Q++ +++A EV ++ +
Sbjct: 147 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 206
Query: 189 SEKSDVYSFGVFLLELVSGR 208
S +SDVY+FG+ L EL++G+
Sbjct: 207 SFQSDVYAFGIVLYELMTGQ 226
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPT----QEFIDEVCFLASIQHRNLVTLLGYC 71
IG G FG VYKG VA+K APT Q F +EV L +H N++ +GY
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 72 QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVV 131
+ L ++ ++ S+ HL+ + K E + I ++
Sbjct: 102 TKPQLA-IVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLHAKS--II 154
Query: 132 HKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEV---KEFRRF 188
H+D K+ N+ + ED K+ D GL R + Q++ +++A EV ++ +
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 189 SEKSDVYSFGVFLLELVSGR 208
S +SDVY+FG+ L EL++G+
Sbjct: 215 SFQSDVYAFGIVLYELMTGQ 234
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 91/195 (46%), Gaps = 15/195 (7%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPTQE-FIDEVCFLASIQHRNLVTLLGYCQEN 74
+G+G FGEV+ G VAIK +PG + E F+ E + ++H LV L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV--VH 132
+ +++ EY+ G + L G ++ RL R+ VH
Sbjct: 86 PI-YIVMEYMSKGCLLDFLKG-------EMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 133 KDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI-FLASEVKEFRRFSEK 191
+D + AN+LV E+ + KVAD GL + + + Q I + A E + RF+ K
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYT--ARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 192 SDVYSFGVFLLELVS 206
SDV+SFG+ L EL +
Sbjct: 196 SDVWSFGILLTELTT 210
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPT----QEFIDEVCFLASIQHRNLVTLLGYC 71
IG G FG VYKG VA+K APT Q F +EV L +H N++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 72 QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVV 131
+ L ++ ++ S+ HL+ + K E + I ++
Sbjct: 74 TKPQLA-IVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLHAKS--II 126
Query: 132 HKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEV---KEFRRF 188
H+D K+ N+ + ED K+ D GL R + Q++ +++A EV ++ +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 189 SEKSDVYSFGVFLLELVSGR 208
S +SDVY+FG+ L EL++G+
Sbjct: 187 SFQSDVYAFGIVLYELMTGQ 206
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 91/195 (46%), Gaps = 15/195 (7%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPTQE-FIDEVCFLASIQHRNLVTLLGYCQEN 74
+G+G FGEV+ G VAIK +PG + E F+ E + ++H LV L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV--VH 132
+ +++ EY+ G + L G ++ RL R+ VH
Sbjct: 86 PI-YIVTEYMSKGCLLDFLKG-------EMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 133 KDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI-FLASEVKEFRRFSEK 191
+D + AN+LV E+ + KVAD GL + + + Q I + A E + RF+ K
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYT--ARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 192 SDVYSFGVFLLELVS 206
SDV+SFG+ L EL +
Sbjct: 196 SDVWSFGILLTELTT 210
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 11/193 (5%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPTQE-FIDEVCFLASIQHRNLVTLLGYCQEN 74
+G G+FGEV+ G VAIK +PG + E F++E + ++H LV L E
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSEE 76
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKD 134
+ +++ EY+ GS+ L + L+ + + + +H+D
Sbjct: 77 PI-YIVTEYMNKGSLLDFL---KDGEGRALKLPNLVDMAAQVAAGMAYIERM--NYIHRD 130
Query: 135 FKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI-FLASEVKEFRRFSEKSD 193
++AN+LV I K+AD GL + D + Q I + A E + RF+ KSD
Sbjct: 131 LRSANILVGNGLICKIADFGLARLI--EDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 188
Query: 194 VYSFGVFLLELVS 206
V+SFG+ L ELV+
Sbjct: 189 VWSFGILLTELVT 201
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 122/292 (41%), Gaps = 41/292 (14%)
Query: 17 IGEGKFGEVY--------KGLLQDGMLVAIKKRPGAPTQ----EFIDEVCFLASI-QHRN 63
+GEG FG+V K ++ + VA+K T+ + + E+ + I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHL-----------YGPSQVSRQKLEFKHRLSI 112
++TLLG C ++ ++I EY G++ +L Y ++V +++ FK +S
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 113 XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT 172
+ +H+D NVLV E+ + K+AD GL + D ++
Sbjct: 163 TYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 173 ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDF 232
++A E R ++ +SDV+SFGV + E+ + VE
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT------LGGSPYPGIPVE-------- 266
Query: 233 SNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
L K+L E E ++ C +RP+ +V +LDR L
Sbjct: 267 -ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 116/282 (41%), Gaps = 19/282 (6%)
Query: 17 IGEGKFGEV---YKGLLQD--GMLVAIKKRPGAPTQEFID---EVCFLASIQHRNLVTLL 68
+G+G FG V LQD G +VA+KK + + D E+ L S+QH N+V
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 69 GYCQ---ENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
G C NL+ LI EY+P GS+ +L + K H +
Sbjct: 109 GVCYSAGRRNLK-LIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL 161
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFL-ASEVKE 184
R +H+D T N+LV+ + K+ D GL L + + IF A E
Sbjct: 162 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 221
Query: 185 FRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLW 244
+FS SDV+SFGV L EL + E Q +L+++L
Sbjct: 222 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 281
Query: 245 STFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLDK 286
+ +E ++ C + + +RPS D+ +D+ D+
Sbjct: 282 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 90/194 (46%), Gaps = 17/194 (8%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPTQEFIDEVCFLASIQHRNLVTLLGY-CQEN 74
IG+G+FG+V G + G VA+K + A Q F+ E + ++H NLV LLG +E
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEK 87
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKD 134
+++ EY+ GS+ +L SR + + VH+D
Sbjct: 88 GGLYIVTEYMAKGSLVDYLR-----SRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD 142
Query: 135 FKTANVLVDEDFIAKVADAGLRNFLGRTDVAG--PSSQVTADEIFLASEVKEFRRFSEKS 192
NVLV ED +AKV+D GL T G P + A E ++FS KS
Sbjct: 143 LAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK-------WTAPEALREKKFSTKS 195
Query: 193 DVYSFGVFLLELVS 206
DV+SFG+ L E+ S
Sbjct: 196 DVWSFGILLWEIYS 209
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 19/197 (9%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGYCQEN 74
+G G+FG V G + VAIK K EFI+E + ++ H LV L G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 76
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLS----IXXXXXXXXXXXXXXXPRV 130
F+I EY+ NG + +L E +HR + +
Sbjct: 77 RPIFIITEYMANGCLLNYL----------REMRHRFQTQQLLEMCKDVCEAMEYLESKQF 126
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI-FLASEVKEFRRFS 189
+H+D N LV++ + KV+D GL ++ D SS+ + + + EV + +FS
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSRGSKFPVRWSPPEVLMYSKFS 184
Query: 190 EKSDVYSFGVFLLELVS 206
KSD+++FGV + E+ S
Sbjct: 185 SKSDIWAFGVLMWEIYS 201
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 88/197 (44%), Gaps = 19/197 (9%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGYCQEN 74
+G G+FG V G + VAIK K EFI+E + ++ H LV L G C +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 91
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLS----IXXXXXXXXXXXXXXXPRV 130
F+I EY+ NG + +L E +HR + +
Sbjct: 92 RPIFIITEYMANGCLLNYL----------REMRHRFQTQQLLEMCKDVCEAMEYLESKQF 141
Query: 131 VHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
+H+D N LV++ + KV+D GL R L + + S+ + EV + +FS
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVR--WSPPEVLMYSKFS 199
Query: 190 EKSDVYSFGVFLLELVS 206
KSD+++FGV + E+ S
Sbjct: 200 SKSDIWAFGVLMWEIYS 216
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 95/201 (47%), Gaps = 26/201 (12%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGA-PTQEFIDEVCFLASIQHRNLVTLLGYCQEN 74
+G G+FGEV+ G + VA+K +PG Q F++E + ++QH LV L +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKE 79
Query: 75 NLQFLIYEYIPNGSVSIHLY---GPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVV 131
++I E++ GS+ L G + + ++F +++ +
Sbjct: 80 EPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIA--------EGMAYIERKNYI 131
Query: 132 HKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE------IFLASEVKEF 185
H+D + ANVLV E + K+AD GL + ++ TA E + A E F
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVI-------EDNEYTAREGAKFPIKWTAPEAINF 184
Query: 186 RRFSEKSDVYSFGVFLLELVS 206
F+ KS+V+SFG+ L E+V+
Sbjct: 185 GCFTIKSNVWSFGILLYEIVT 205
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 90/194 (46%), Gaps = 17/194 (8%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPTQEFIDEVCFLASIQHRNLVTLLGY-CQEN 74
IG+G+FG+V G + G VA+K + A Q F+ E + ++H NLV LLG +E
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEK 72
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKD 134
+++ EY+ GS+ +L SR + + VH+D
Sbjct: 73 GGLYIVTEYMAKGSLVDYLR-----SRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD 127
Query: 135 FKTANVLVDEDFIAKVADAGLRNFLGRTDVAG--PSSQVTADEIFLASEVKEFRRFSEKS 192
NVLV ED +AKV+D GL T G P + A E ++FS KS
Sbjct: 128 LAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK-------WTAPEALREKKFSTKS 180
Query: 193 DVYSFGVFLLELVS 206
DV+SFG+ L E+ S
Sbjct: 181 DVWSFGILLWEIYS 194
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 90/194 (46%), Gaps = 17/194 (8%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPTQEFIDEVCFLASIQHRNLVTLLGY-CQEN 74
IG+G+FG+V G + G VA+K + A Q F+ E + ++H NLV LLG +E
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEK 259
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKD 134
+++ EY+ GS+ +L SR + + VH+D
Sbjct: 260 GGLYIVTEYMAKGSLVDYLR-----SRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD 314
Query: 135 FKTANVLVDEDFIAKVADAGLRNFLGRTDVAG--PSSQVTADEIFLASEVKEFRRFSEKS 192
NVLV ED +AKV+D GL T G P + A E ++FS KS
Sbjct: 315 LAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK-------WTAPEALREKKFSTKS 367
Query: 193 DVYSFGVFLLELVS 206
DV+SFG+ L E+ S
Sbjct: 368 DVWSFGILLWEIYS 381
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 115/281 (40%), Gaps = 19/281 (6%)
Query: 17 IGEGKFGEV---YKGLLQD--GMLVAIKKRPGAPTQEFID---EVCFLASIQHRNLVTLL 68
+G+G FG V LQD G +VA+KK + + D E+ L S+QH N+V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 69 GYCQ---ENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
G C NL+ LI EY+P GS+ +L + K H +
Sbjct: 96 GVCYSAGRRNLK-LIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL 148
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFL-ASEVKE 184
R +H+D T N+LV+ + K+ D GL L + + IF A E
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 185 FRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLW 244
+FS SDV+SFGV L EL + E Q +L+++L
Sbjct: 209 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 268
Query: 245 STFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLD 285
+ +E ++ C + + +RPS D+ +D+ D
Sbjct: 269 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 309
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 115/281 (40%), Gaps = 19/281 (6%)
Query: 17 IGEGKFGEV---YKGLLQD--GMLVAIKKRPGAPTQEFID---EVCFLASIQHRNLVTLL 68
+G+G FG V LQD G +VA+KK + + D E+ L S+QH N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 69 GYCQ---ENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
G C NL+ LI EY+P GS+ +L + K H +
Sbjct: 78 GVCYSAGRRNLK-LIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL 130
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFL-ASEVKE 184
R +H+D T N+LV+ + K+ D GL L + + IF A E
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 185 FRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLW 244
+FS SDV+SFGV L EL + E Q +L+++L
Sbjct: 191 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 250
Query: 245 STFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLD 285
+ +E ++ C + + +RPS D+ +D+ D
Sbjct: 251 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 116/282 (41%), Gaps = 19/282 (6%)
Query: 17 IGEGKFGEV---YKGLLQD--GMLVAIKKRPGAPTQEFID---EVCFLASIQHRNLVTLL 68
+G+G FG V LQD G +VA+KK + + D E+ L S+QH N+V
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 69 GYCQ---ENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
G C NL+ LI EY+P GS+ +L + K H +
Sbjct: 76 GVCYSAGRRNLK-LIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL 128
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFL-ASEVKE 184
R +H+D T N+LV+ + K+ D GL L + + IF A E
Sbjct: 129 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 188
Query: 185 FRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLW 244
+FS SDV+SFGV L EL + E Q +L+++L
Sbjct: 189 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 248
Query: 245 STFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLDK 286
+ +E ++ C + + +RPS D+ +D+ D+
Sbjct: 249 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 290
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 115/281 (40%), Gaps = 19/281 (6%)
Query: 17 IGEGKFGEV---YKGLLQD--GMLVAIKKRPGAPTQEFID---EVCFLASIQHRNLVTLL 68
+G+G FG V LQD G +VA+KK + + D E+ L S+QH N+V
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 69 GYCQ---ENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
G C NL+ LI EY+P GS+ +L + K H +
Sbjct: 85 GVCYSAGRRNLK-LIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL 137
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFL-ASEVKE 184
R +H+D T N+LV+ + K+ D GL L + + IF A E
Sbjct: 138 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 197
Query: 185 FRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLW 244
+FS SDV+SFGV L EL + E Q +L+++L
Sbjct: 198 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 257
Query: 245 STFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLD 285
+ +E ++ C + + +RPS D+ +D+ D
Sbjct: 258 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 298
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 115/281 (40%), Gaps = 19/281 (6%)
Query: 17 IGEGKFGEV---YKGLLQD--GMLVAIKKRPGAPTQEFID---EVCFLASIQHRNLVTLL 68
+G+G FG V LQD G +VA+KK + + D E+ L S+QH N+V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 69 GYCQ---ENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
G C NL+ LI EY+P GS+ +L + K H +
Sbjct: 96 GVCYSAGRRNLK-LIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL 148
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFL-ASEVKE 184
R +H+D T N+LV+ + K+ D GL L + + IF A E
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 185 FRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLW 244
+FS SDV+SFGV L EL + E Q +L+++L
Sbjct: 209 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 268
Query: 245 STFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLD 285
+ +E ++ C + + +RPS D+ +D+ D
Sbjct: 269 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 309
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 121/292 (41%), Gaps = 41/292 (14%)
Query: 17 IGEGKFGEVY--------KGLLQDGMLVAIKKRPGAPTQE----FIDEVCFLASI-QHRN 63
+GEG FG+V K ++ + VA+K T+E + E+ + I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHL-----------YGPSQVSRQKLEFKHRLSI 112
++ LLG C ++ ++I EY G++ +L Y ++V +++ FK +S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 113 XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT 172
+ +H+D NVLV E+ + K+AD GL + D ++
Sbjct: 163 TYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 173 ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDF 232
++A E R ++ +SDV+SFGV + E+ + VE
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT------LGGSPYPGIPVE-------- 266
Query: 233 SNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
L K+L E E ++ C +RP+ +V +LDR L
Sbjct: 267 -ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 115/281 (40%), Gaps = 19/281 (6%)
Query: 17 IGEGKFGEV---YKGLLQD--GMLVAIKKRPGAPTQEFID---EVCFLASIQHRNLVTLL 68
+G+G FG V LQD G +VA+KK + + D E+ L S+QH N+V
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 69 GYCQ---ENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
G C NL+ LI EY+P GS+ +L + K H +
Sbjct: 83 GVCYSAGRRNLK-LIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL 135
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFL-ASEVKE 184
R +H+D T N+LV+ + K+ D GL L + + IF A E
Sbjct: 136 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 195
Query: 185 FRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLW 244
+FS SDV+SFGV L EL + E Q +L+++L
Sbjct: 196 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 255
Query: 245 STFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLD 285
+ +E ++ C + + +RPS D+ +D+ D
Sbjct: 256 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 296
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 115/281 (40%), Gaps = 19/281 (6%)
Query: 17 IGEGKFGEV---YKGLLQD--GMLVAIKKRPGAPTQEFID---EVCFLASIQHRNLVTLL 68
+G+G FG V LQD G +VA+KK + + D E+ L S+QH N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 69 GYCQ---ENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
G C NL+ LI EY+P GS+ +L + K H +
Sbjct: 81 GVCYSAGRRNLK-LIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL 133
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFL-ASEVKE 184
R +H+D T N+LV+ + K+ D GL L + + IF A E
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 185 FRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLW 244
+FS SDV+SFGV L EL + E Q +L+++L
Sbjct: 194 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 253
Query: 245 STFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLD 285
+ +E ++ C + + +RPS D+ +D+ D
Sbjct: 254 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 294
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 115/281 (40%), Gaps = 19/281 (6%)
Query: 17 IGEGKFGEV---YKGLLQD--GMLVAIKKRPGAPTQEFID---EVCFLASIQHRNLVTLL 68
+G+G FG V LQD G +VA+KK + + D E+ L S+QH N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 69 GYCQ---ENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
G C NL+ LI EY+P GS+ +L + K H +
Sbjct: 78 GVCYSAGRRNLK-LIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL 130
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFL-ASEVKE 184
R +H+D T N+LV+ + K+ D GL L + + IF A E
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 185 FRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLW 244
+FS SDV+SFGV L EL + E Q +L+++L
Sbjct: 191 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 250
Query: 245 STFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLD 285
+ +E ++ C + + +RPS D+ +D+ D
Sbjct: 251 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 111/265 (41%), Gaps = 38/265 (14%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGYCQEN 74
+G G+FGEV+ G VA+K K+ F+ E + +QH+ LV L +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 76
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKD 134
+ ++I EY+ NGS+ L PS + KL L + +H++
Sbjct: 77 PI-YIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER--NYIHRN 130
Query: 135 FKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE------IFLASEVKEFRRF 188
+ AN+LV + K+AD GL + ++ TA E + A E + F
Sbjct: 131 LRAANILVSDTLSCKIADFGLARLI-------EDNEYTAREGAKFPIKWTAPEAINYGTF 183
Query: 189 SEKSDVYSFGVFLLELVS-GREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLWSTF 247
+ KSDV+SFG+ L E+V+ GR E++QN +++
Sbjct: 184 TIKSDVWSFGILLTEIVTHGR------IPYPGMTNPEVIQNLERGYRMVR---------- 227
Query: 248 TNEGMEEFIQLIVRCLDPSSERRPS 272
+ EE QL+ C E RP+
Sbjct: 228 PDNCPEELYQLMRLCWKERPEDRPT 252
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 115/281 (40%), Gaps = 19/281 (6%)
Query: 17 IGEGKFGEV---YKGLLQD--GMLVAIKKRPGAPTQEFID---EVCFLASIQHRNLVTLL 68
+G+G FG V LQD G +VA+KK + + D E+ L S+QH N+V
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 69 GYCQ---ENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
G C NL+ LI EY+P GS+ +L + K H +
Sbjct: 82 GVCYSAGRRNLK-LIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL 134
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFL-ASEVKE 184
R +H+D T N+LV+ + K+ D GL L + + IF A E
Sbjct: 135 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 194
Query: 185 FRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLW 244
+FS SDV+SFGV L EL + E Q +L+++L
Sbjct: 195 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 254
Query: 245 STFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLD 285
+ +E ++ C + + +RPS D+ +D+ D
Sbjct: 255 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 295
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 120/292 (41%), Gaps = 41/292 (14%)
Query: 17 IGEGKFGEVYK----GLLQDG----MLVAIKKRPGAPTQ----EFIDEVCFLASI-QHRN 63
+GEG FG+V GL +D VA+K T+ + I E+ + I +H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHL-----------YGPSQVSRQKLEFKHRLSI 112
++ LLG C ++ ++I EY G++ +L Y PS ++L K +S
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 113 XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT 172
+ +H+D NVLV ED + K+AD GL + D ++
Sbjct: 197 AYQVARGMEYLASK--KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 254
Query: 173 ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDF 232
++A E R ++ +SDV+SFGV L E+ + VE
Sbjct: 255 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------LGGSPYPGVPVE-------- 300
Query: 233 SNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
L K+L E + E ++ C +RP+ +V +LDR +
Sbjct: 301 -ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 351
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 115/281 (40%), Gaps = 19/281 (6%)
Query: 17 IGEGKFGEV---YKGLLQD--GMLVAIKKRPGAPTQEFID---EVCFLASIQHRNLVTLL 68
+G+G FG V LQD G +VA+KK + + D E+ L S+QH N+V
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 69 GYCQ---ENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
G C NL+ LI EY+P GS+ +L + K H +
Sbjct: 84 GVCYSAGRRNLK-LIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL 136
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFL-ASEVKE 184
R +H+D T N+LV+ + K+ D GL L + + IF A E
Sbjct: 137 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 196
Query: 185 FRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLW 244
+FS SDV+SFGV L EL + E Q +L+++L
Sbjct: 197 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 256
Query: 245 STFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLD 285
+ +E ++ C + + +RPS D+ +D+ D
Sbjct: 257 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 297
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 120/292 (41%), Gaps = 41/292 (14%)
Query: 17 IGEGKFGEVYK----GLLQDG----MLVAIKKRPGAPTQ----EFIDEVCFLASI-QHRN 63
+GEG FG+V GL +D VA+K T+ + I E+ + I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHL-----------YGPSQVSRQKLEFKHRLSI 112
++ LLG C ++ ++I EY G++ +L Y PS ++L K +S
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 113 XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT 172
+ +H+D NVLV ED + K+AD GL + D ++
Sbjct: 156 AYQVARGMEYLASK--KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 213
Query: 173 ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDF 232
++A E R ++ +SDV+SFGV L E+ + VE
Sbjct: 214 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------LGGSPYPGVPVE-------- 259
Query: 233 SNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
L K+L E + E ++ C +RP+ +V +LDR +
Sbjct: 260 -ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 310
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 120/292 (41%), Gaps = 41/292 (14%)
Query: 17 IGEGKFGEVYK----GLLQDG----MLVAIKKRPGAPTQ----EFIDEVCFLASI-QHRN 63
+GEG FG+V GL +D VA+K T+ + I E+ + I +H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHL-----------YGPSQVSRQKLEFKHRLSI 112
++ LLG C ++ ++I EY G++ +L Y PS ++L K +S
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 113 XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT 172
+ +H+D NVLV ED + K+AD GL + D ++
Sbjct: 148 AYQVARGMEYLASK--KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 205
Query: 173 ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDF 232
++A E R ++ +SDV+SFGV L E+ + VE
Sbjct: 206 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------LGGSPYPGVPVE-------- 251
Query: 233 SNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
L K+L E + E ++ C +RP+ +V +LDR +
Sbjct: 252 -ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 302
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 120/292 (41%), Gaps = 41/292 (14%)
Query: 17 IGEGKFGEVYK----GLLQDG----MLVAIKKRPGAPTQ----EFIDEVCFLASI-QHRN 63
+GEG FG+V GL +D VA+K T+ + I E+ + I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHL-----------YGPSQVSRQKLEFKHRLSI 112
++ LLG C ++ ++I EY G++ +L Y PS ++L K +S
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 113 XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT 172
+ +H+D NVLV ED + K+AD GL + D ++
Sbjct: 156 AYQVARGMEYLASK--KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 213
Query: 173 ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDF 232
++A E R ++ +SDV+SFGV L E+ + VE
Sbjct: 214 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------LGGSPYPGVPVE-------- 259
Query: 233 SNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
L K+L E + E ++ C +RP+ +V +LDR +
Sbjct: 260 -ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 310
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 115/281 (40%), Gaps = 19/281 (6%)
Query: 17 IGEGKFGEV---YKGLLQD--GMLVAIKKRPGAPTQEFID---EVCFLASIQHRNLVTLL 68
+G+G FG V LQD G +VA+KK + + D E+ L S+QH N+V
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 69 GYCQ---ENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
G C NL+ LI EY+P GS+ +L + K H +
Sbjct: 77 GVCYSAGRRNLK-LIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL 129
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFL-ASEVKE 184
R +H+D T N+LV+ + K+ D GL L + + IF A E
Sbjct: 130 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 189
Query: 185 FRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLW 244
+FS SDV+SFGV L EL + E Q +L+++L
Sbjct: 190 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 249
Query: 245 STFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLD 285
+ +E ++ C + + +RPS D+ +D+ D
Sbjct: 250 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 290
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 120/292 (41%), Gaps = 41/292 (14%)
Query: 17 IGEGKFGEVYK----GLLQDG----MLVAIKKRPGAPTQ----EFIDEVCFLASI-QHRN 63
+GEG FG+V GL +D VA+K T+ + I E+ + I +H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHL-----------YGPSQVSRQKLEFKHRLSI 112
++ LLG C ++ ++I EY G++ +L Y PS ++L K +S
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 113 XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT 172
+ +H+D NVLV ED + K+AD GL + D ++
Sbjct: 145 AYQVARGMEYLASK--KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 202
Query: 173 ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDF 232
++A E R ++ +SDV+SFGV L E+ + VE
Sbjct: 203 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------LGGSPYPGVPVE-------- 248
Query: 233 SNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
L K+L E + E ++ C +RP+ +V +LDR +
Sbjct: 249 -ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 299
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 120/292 (41%), Gaps = 41/292 (14%)
Query: 17 IGEGKFGEVYK----GLLQDG----MLVAIKKRPGAPTQ----EFIDEVCFLASI-QHRN 63
+GEG FG+V GL +D VA+K T+ + I E+ + I +H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHL-----------YGPSQVSRQKLEFKHRLSI 112
++ LLG C ++ ++I EY G++ +L Y PS ++L K +S
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 113 XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT 172
+ +H+D NVLV ED + K+AD GL + D ++
Sbjct: 149 AYQVARGMEYLASK--KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 206
Query: 173 ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDF 232
++A E R ++ +SDV+SFGV L E+ + VE
Sbjct: 207 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------LGGSPYPGVPVE-------- 252
Query: 233 SNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
L K+L E + E ++ C +RP+ +V +LDR +
Sbjct: 253 -ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 303
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 120/292 (41%), Gaps = 41/292 (14%)
Query: 17 IGEGKFGEVYK----GLLQDG----MLVAIKKRPGAPTQ----EFIDEVCFLASI-QHRN 63
+GEG FG+V GL +D VA+K T+ + I E+ + I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHL-----------YGPSQVSRQKLEFKHRLSI 112
++ LLG C ++ ++I EY G++ +L Y PS ++L K +S
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 113 XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT 172
+ +H+D NVLV ED + K+AD GL + D ++
Sbjct: 156 AYQVARGMEYLASK--KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 213
Query: 173 ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDF 232
++A E R ++ +SDV+SFGV L E+ + VE
Sbjct: 214 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------LGGSPYPGVPVE-------- 259
Query: 233 SNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
L K+L E + E ++ C +RP+ +V +LDR +
Sbjct: 260 -ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 310
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 120/292 (41%), Gaps = 41/292 (14%)
Query: 17 IGEGKFGEVYK----GLLQDG----MLVAIKKRPGAPTQ----EFIDEVCFLASI-QHRN 63
+GEG FG+V GL +D VA+K T+ + I E+ + I +H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHL-----------YGPSQVSRQKLEFKHRLSI 112
++ LLG C ++ ++I EY G++ +L Y PS ++L K +S
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 113 XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT 172
+ +H+D NVLV ED + K+AD GL + D ++
Sbjct: 141 AYQVARGMEYLASK--KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 198
Query: 173 ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDF 232
++A E R ++ +SDV+SFGV L E+ + VE
Sbjct: 199 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------LGGSPYPGVPVE-------- 244
Query: 233 SNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
L K+L E + E ++ C +RP+ +V +LDR +
Sbjct: 245 -ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 295
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 87/199 (43%), Gaps = 23/199 (11%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGYCQEN 74
+G G+FG V G + VAIK K EFI+E + ++ H LV L G C +
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 75
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLS----IXXXXXXXXXXXXXXXPRV 130
F+I EY+ NG + +L E +HR + +
Sbjct: 76 RPIFIITEYMANGCLLNYL----------REMRHRFQTQQLLEMCKDVCEAMEYLESKQF 125
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLRNFL---GRTDVAGPSSQVTADEIFLASEVKEFRR 187
+H+D N LV++ + KV+D GL ++ T G V + EV + +
Sbjct: 126 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR----WSPPEVLMYSK 181
Query: 188 FSEKSDVYSFGVFLLELVS 206
FS KSD+++FGV + E+ S
Sbjct: 182 FSSKSDIWAFGVLMWEIYS 200
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 87/199 (43%), Gaps = 23/199 (11%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGYCQEN 74
+G G+FG V G + VAIK K EFI+E + ++ H LV L G C +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 71
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLS----IXXXXXXXXXXXXXXXPRV 130
F+I EY+ NG + +L E +HR + +
Sbjct: 72 RPIFIITEYMANGCLLNYL----------REMRHRFQTQQLLEMCKDVCEAMEYLESKQF 121
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLRNFL---GRTDVAGPSSQVTADEIFLASEVKEFRR 187
+H+D N LV++ + KV+D GL ++ T G V + EV + +
Sbjct: 122 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR----WSPPEVLMYSK 177
Query: 188 FSEKSDVYSFGVFLLELVS 206
FS KSD+++FGV + E+ S
Sbjct: 178 FSSKSDIWAFGVLMWEIYS 196
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 87/199 (43%), Gaps = 23/199 (11%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGYCQEN 74
+G G+FG V G + VAIK K EFI+E + ++ H LV L G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 76
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLS----IXXXXXXXXXXXXXXXPRV 130
F+I EY+ NG + +L E +HR + +
Sbjct: 77 RPIFIITEYMANGCLLNYL----------REMRHRFQTQQLLEMCKDVCEAMEYLESKQF 126
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLRNFL---GRTDVAGPSSQVTADEIFLASEVKEFRR 187
+H+D N LV++ + KV+D GL ++ T G V + EV + +
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR----WSPPEVLMYSK 182
Query: 188 FSEKSDVYSFGVFLLELVS 206
FS KSD+++FGV + E+ S
Sbjct: 183 FSSKSDIWAFGVLMWEIYS 201
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 87/199 (43%), Gaps = 23/199 (11%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGYCQEN 74
+G G+FG V G + VAIK K EFI+E + ++ H LV L G C +
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 82
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLS----IXXXXXXXXXXXXXXXPRV 130
F+I EY+ NG + +L E +HR + +
Sbjct: 83 RPIFIITEYMANGCLLNYL----------REMRHRFQTQQLLEMCKDVCEAMEYLESKQF 132
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLRNFL---GRTDVAGPSSQVTADEIFLASEVKEFRR 187
+H+D N LV++ + KV+D GL ++ T G V + EV + +
Sbjct: 133 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR----WSPPEVLMYSK 188
Query: 188 FSEKSDVYSFGVFLLELVS 206
FS KSD+++FGV + E+ S
Sbjct: 189 FSSKSDIWAFGVLMWEIYS 207
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 87/199 (43%), Gaps = 23/199 (11%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGYCQEN 74
+G G+FG V G + VAIK K EFI+E + ++ H LV L G C +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 91
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLS----IXXXXXXXXXXXXXXXPRV 130
F+I EY+ NG + +L E +HR + +
Sbjct: 92 RPIFIITEYMANGCLLNYL----------REMRHRFQTQQLLEMCKDVCEAMEYLESKQF 141
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLRNFL---GRTDVAGPSSQVTADEIFLASEVKEFRR 187
+H+D N LV++ + KV+D GL ++ T G V + EV + +
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR----WSPPEVLMYSK 197
Query: 188 FSEKSDVYSFGVFLLELVS 206
FS KSD+++FGV + E+ S
Sbjct: 198 FSSKSDIWAFGVLMWEIYS 216
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 120/283 (42%), Gaps = 34/283 (12%)
Query: 14 KNLIGEGKFGEVYKGLLQ----DGMLVAIKKRPGAPTQ----EFIDEVCFLASIQHRNLV 65
+ +IG G+FGEV G L+ + VAIK T+ +F+ E + H N++
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 66 TLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
L G ++ +I E++ NGS+ S + + +F +
Sbjct: 98 HLEGVVTKSTPVMIITEFMENGSLD------SFLRQNDGQFTVIQLVGMLRGIAAGMKYL 151
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPS-SQVTADEI---FLASE 181
VH+D N+LV+ + + KV+D GL FL D + P+ + +I + A E
Sbjct: 152 ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFL-EDDTSDPTYTSALGGKIPIRWTAPE 210
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDE 241
++R+F+ SDV+S+G+ + E++S E ++D N ++ D
Sbjct: 211 AIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD------------MTNQDVINAIE-QDY 257
Query: 242 RLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
RL + QL++ C RP +V LD+ +
Sbjct: 258 RLPPPM--DCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMI 298
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 86/204 (42%), Gaps = 19/204 (9%)
Query: 14 KNLIGEGKFGEVYKGLL----QDGMLVAIKKRPGAPTQ----EFIDEVCFLASIQHRNLV 65
+ +IG G GEV G L Q + VAIK T+ +F+ E + H N++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 66 TLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
L G L ++ EY+ NGS+ L +F +
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFL------RTHDGQFTIMQLVGMLRGVGAGMRYL 167
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI---FLASEV 182
VH+D NVLVD + + KV+D GL L D + T +I + A E
Sbjct: 168 SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL--EDDPDAAXTTTGGKIPIRWTAPEA 225
Query: 183 KEFRRFSEKSDVYSFGVFLLELVS 206
FR FS SDV+SFGV + E+++
Sbjct: 226 IAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 110/265 (41%), Gaps = 38/265 (14%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGYCQEN 74
+G G+ GEV+ G VA+K K+ F+ E + +QH+ LV L +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKD 134
+ ++I EY+ NGS+ L PS + KL L + +H+D
Sbjct: 81 PI-YIITEYMENGSLVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEER--NYIHRD 134
Query: 135 FKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE------IFLASEVKEFRRF 188
+ AN+LV + K+AD GL + ++ TA E + A E + F
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIE-------DAEXTAREGAKFPIKWTAPEAINYGTF 187
Query: 189 SEKSDVYSFGVFLLELVS-GREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLWSTF 247
+ KSDV+SFG+ L E+V+ GR E++QN +++
Sbjct: 188 TIKSDVWSFGILLTEIVTHGR------IPYPGMTNPEVIQNLERGYRMVR---------- 231
Query: 248 TNEGMEEFIQLIVRCLDPSSERRPS 272
+ EE QL+ C E RP+
Sbjct: 232 PDNCPEELYQLMRLCWKERPEDRPT 256
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 117/276 (42%), Gaps = 32/276 (11%)
Query: 16 LIGEGKFGEVYKGLLQDG----MLVAIKK----RPGAPTQEFIDEVCFLASIQHRNLVTL 67
+IG G FG VY G L D + A+K +F+ E + H N+++L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 68 LGYC-QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXX 126
LG C + ++ Y+ +G + + + K L +
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---- 153
Query: 127 XPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRT-DVAGPSSQVTADEIFLASEVKE 184
+ VH+D N ++DE F KVAD GL R+ L + D + ++A E +
Sbjct: 154 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 185 FRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLW 244
++F+ KSDV+SFGV L EL++ R A V L+Q R LL+
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRR----LLQ------- 259
Query: 245 STFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTEL 280
+ +++++C P +E RPS S++V+ +
Sbjct: 260 ---PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 292
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 122/304 (40%), Gaps = 56/304 (18%)
Query: 16 LIGEGKFGEVYKGLLQDG----MLVAIKKRPGAPTQ----EFIDEVCFLASIQHRNLVTL 67
+IG G+FGEV +G L+ VAIK G T+ EF+ E + +H N++ L
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 68 LGYCQENNLQFLIYEYIPNGSVS------------IHLYGPSQVSRQKLEFKHRLSIXXX 115
G + ++ E++ NG++ I L G + + + +S
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMS---- 138
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
VH+D N+LV+ + + KV+D GL FL + +
Sbjct: 139 --------------YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGK 184
Query: 176 I---FLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDF 232
I + A E FR+F+ SD +S+G+ + E++S E +++D
Sbjct: 185 IPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWD------------MSNQDV 232
Query: 233 SNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLDKEMNLTT 292
N ++ D RL + QL++ C RP VV+ LD+ + +L
Sbjct: 233 INAIE-QDYRL--PPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIRNPASLKI 289
Query: 293 VMGE 296
V E
Sbjct: 290 VARE 293
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 86/204 (42%), Gaps = 19/204 (9%)
Query: 14 KNLIGEGKFGEVYKGLL----QDGMLVAIKKRPGAPTQ----EFIDEVCFLASIQHRNLV 65
+ +IG G GEV G L Q + VAIK T+ +F+ E + H N++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 66 TLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
L G L ++ EY+ NGS+ L +F +
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFL------RTHDGQFTIMQLVGMLRGVGAGMRYL 167
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI---FLASEV 182
VH+D NVLVD + + KV+D GL L D + T +I + A E
Sbjct: 168 SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL--EDDPDAAYTTTGGKIPIRWTAPEA 225
Query: 183 KEFRRFSEKSDVYSFGVFLLELVS 206
FR FS SDV+SFGV + E+++
Sbjct: 226 IAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 121/292 (41%), Gaps = 41/292 (14%)
Query: 17 IGEGKFGEVY--------KGLLQDGMLVAIKKRPGAPTQ----EFIDEVCFLASI-QHRN 63
+GEG FG+V K ++ + VA+K T+ + + E+ + I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHL-----------YGPSQVSRQKLEFKHRLSI 112
++ LLG C ++ ++I EY G++ +L Y ++V +++ FK +S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 113 XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT 172
+ +H+D NVLV E+ + K+AD GL + D ++
Sbjct: 163 TYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGR 220
Query: 173 ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDF 232
++A E R ++ +SDV+SFGV + E+ + VE
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT------LGGSPYPGIPVE-------- 266
Query: 233 SNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
L K+L E E ++ C +RP+ +V +LDR L
Sbjct: 267 -ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 121/292 (41%), Gaps = 41/292 (14%)
Query: 17 IGEGKFGEVY--------KGLLQDGMLVAIKKRPGAPTQ----EFIDEVCFLASI-QHRN 63
+GEG FG+V K ++ + VA+K T+ + + E+ + I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHL-----------YGPSQVSRQKLEFKHRLSI 112
++ LLG C ++ ++I EY G++ +L Y ++V +++ FK +S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 113 XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT 172
+ +H+D NVLV E+ + K+AD GL + D ++
Sbjct: 163 TYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGR 220
Query: 173 ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDF 232
++A E R ++ +SDV+SFGV + E+ + VE
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT------LGGSPYPGIPVE-------- 266
Query: 233 SNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
L K+L E E ++ C +RP+ +V +LDR L
Sbjct: 267 -ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 122/304 (40%), Gaps = 56/304 (18%)
Query: 16 LIGEGKFGEVYKGLLQDG----MLVAIKKRPGAPTQ----EFIDEVCFLASIQHRNLVTL 67
+IG G+FGEV +G L+ VAIK G T+ EF+ E + +H N++ L
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 80
Query: 68 LGYCQENNLQFLIYEYIPNGSVS------------IHLYGPSQVSRQKLEFKHRLSIXXX 115
G + ++ E++ NG++ I L G + + + +S
Sbjct: 81 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMS---- 136
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
VH+D N+LV+ + + KV+D GL FL + +
Sbjct: 137 --------------YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGK 182
Query: 176 I---FLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDF 232
I + A E FR+F+ SD +S+G+ + E++S E +++D
Sbjct: 183 IPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWD------------MSNQDV 230
Query: 233 SNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLDKEMNLTT 292
N ++ D RL + QL++ C RP VV+ LD+ + +L
Sbjct: 231 INAIE-QDYRL--PPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIRNPASLKI 287
Query: 293 VMGE 296
V E
Sbjct: 288 VARE 291
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 115/281 (40%), Gaps = 19/281 (6%)
Query: 17 IGEGKFGEV---YKGLLQD--GMLVAIKKRPGAPTQEFID---EVCFLASIQHRNLVTLL 68
+G+G FG V LQD G +VA+KK + + D E+ L S+QH N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 69 GYCQ---ENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
G C NL+ LI EY+P GS+ +L + K H +
Sbjct: 78 GVCYSAGRRNLK-LIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL 130
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFL-ASEVKE 184
R +H+D T N+LV+ + K+ D GL L + + IF A E
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLT 190
Query: 185 FRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLW 244
+FS SDV+SFGV L EL + E Q +L+++L
Sbjct: 191 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 250
Query: 245 STFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLD 285
+ +E ++ C + + +RPS D+ +D+ D
Sbjct: 251 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 118/281 (41%), Gaps = 19/281 (6%)
Query: 17 IGEGKFGEV---YKGLLQD--GMLVAIKKRPGAPTQEFID---EVCFLASIQHRNLVTLL 68
+G+G FG V LQD G +VA+KK + + D E+ L S+QH N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 69 GYCQ---ENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
G C NL+ LI EY+P GS+ +L Q ++++ H +
Sbjct: 81 GVCYSAGRRNLK-LIMEYLPYGSLRDYL----QAHAERID--HIKLLQYTSQICKGMEYL 133
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFL-ASEVKE 184
R +H+D T N+LV+ + K+ D GL L + + IF A E
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 185 FRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLW 244
+FS SDV+SFGV L EL + E Q +L+++L
Sbjct: 194 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 253
Query: 245 STFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLD 285
+ +E ++ C + + +RPS D+ +D+ D
Sbjct: 254 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 294
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 120/292 (41%), Gaps = 41/292 (14%)
Query: 17 IGEGKFGEVYK----GLLQDG----MLVAIKKRPGAPTQ----EFIDEVCFLASI-QHRN 63
+GEG FG+V GL +D VA+K T+ + I E+ + I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHL-----------YGPSQVSRQKLEFKHRLSI 112
++ LLG C ++ ++I EY G++ +L + PS ++L K +S
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 113 XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT 172
+ +H+D NVLV ED + K+AD GL + D ++
Sbjct: 156 AYQVARGMEYLASK--KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGR 213
Query: 173 ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDF 232
++A E R ++ +SDV+SFGV L E+ + VE
Sbjct: 214 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------LGGSPYPGVPVE-------- 259
Query: 233 SNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
L K+L E + E ++ C +RP+ +V +LDR +
Sbjct: 260 -ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 310
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 123/299 (41%), Gaps = 34/299 (11%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGLLQ----DGMLVAIKKRPGAPTQ----EFIDEVCFLA 57
L N S ++G G+FGEV G L+ + VAIK T+ +F+ E +
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 58 SIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXX 117
H N++ L G ++ ++ EY+ NGS+ S + + +F +
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD------SFLRKHDAQFTVIQLVGMLRG 155
Query: 118 XXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI- 176
VH+D N+L++ + + KV+D GL L A +++ I
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 177 FLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSN-- 234
+ + E +R+F+ SDV+S+G+ L E++S E + + SN
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE-----------------RPYWEMSNQD 258
Query: 235 LLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLDKEMNLTTV 293
++K +DE + QL++ C RP +V+ LD+ + +L +
Sbjct: 259 VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKII 317
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 123/299 (41%), Gaps = 34/299 (11%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGLLQ----DGMLVAIKKRPGAPTQ----EFIDEVCFLA 57
L N S ++G G+FGEV G L+ + VAIK T+ +F+ E +
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 58 SIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXX 117
H N++ L G ++ ++ EY+ NGS+ S + + +F +
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD------SFLRKHDAQFTVIQLVGMLRG 155
Query: 118 XXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI- 176
VH+D N+L++ + + KV+D GL L A +++ I
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 177 FLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSN-- 234
+ + E +R+F+ SDV+S+G+ L E++S E + + SN
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE-----------------RPYWEMSNQD 258
Query: 235 LLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLDKEMNLTTV 293
++K +DE + QL++ C RP +V+ LD+ + +L +
Sbjct: 259 VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKII 317
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPTQEFIDEVCFLASIQHRNLVTLLGY-CQEN 74
IG+G+FG+V G + G VA+K + A Q F+ E + ++H NLV LLG +E
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEK 78
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKD 134
+++ EY+ GS+ +L SR + + VH+D
Sbjct: 79 GGLYIVTEYMAKGSLVDYLR-----SRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD 133
Query: 135 FKTANVLVDEDFIAKVADAGLRNFLGRT-DVAGPSSQVTADEIFLASEVKEFRRFSEKSD 193
NVLV ED +AKV+D GL T D + TA E + FS KSD
Sbjct: 134 LAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREAA------FSTKSD 187
Query: 194 VYSFGVFLLELVS 206
V+SFG+ L E+ S
Sbjct: 188 VWSFGILLWEIYS 200
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 121/292 (41%), Gaps = 41/292 (14%)
Query: 17 IGEGKFGEVY--------KGLLQDGMLVAIKKRPGAPTQ----EFIDEVCFLASI-QHRN 63
+GEG FG+V K ++ + VA+K T+ + + E+ + I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHL-----------YGPSQVSRQKLEFKHRLSI 112
++ LLG C ++ ++I EY G++ +L Y ++V +++ FK +S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 113 XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT 172
+ +H+D NVLV E+ + K+AD GL + D ++
Sbjct: 163 TYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGR 220
Query: 173 ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDF 232
++A E R ++ +SDV+SFGV + E+ + VE
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT------LGGSPYPGIPVE-------- 266
Query: 233 SNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
L K+L E E ++ C +RP+ +V +LDR L
Sbjct: 267 -ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 123/299 (41%), Gaps = 34/299 (11%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGLLQ----DGMLVAIKKRPGAPTQ----EFIDEVCFLA 57
L N S ++G G+FGEV G L+ + VAIK T+ +F+ E +
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 58 SIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXX 117
H N++ L G ++ ++ EY+ NGS+ S + + +F +
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD------SFLRKHDAQFTVIQLVGMLRG 155
Query: 118 XXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI- 176
VH+D N+L++ + + KV+D GL L A +++ I
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 177 FLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSN-- 234
+ + E +R+F+ SDV+S+G+ L E++S E + + SN
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE-----------------RPYWEMSNQD 258
Query: 235 LLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLDKEMNLTTV 293
++K +DE + QL++ C RP +V+ LD+ + +L +
Sbjct: 259 VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKII 317
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 123/299 (41%), Gaps = 34/299 (11%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGLLQ----DGMLVAIKKRPGAPTQ----EFIDEVCFLA 57
L N S ++G G+FGEV G L+ + VAIK T+ +F+ E +
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 58 SIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXX 117
H N++ L G ++ ++ EY+ NGS+ S + + +F +
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD------SFLRKHDAQFTVIQLVGMLRG 155
Query: 118 XXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI- 176
VH+D N+L++ + + KV+D GL L A +++ I
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 177 FLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSN-- 234
+ + E +R+F+ SDV+S+G+ L E++S E + + SN
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE-----------------RPYWEMSNQD 258
Query: 235 LLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLDKEMNLTTV 293
++K +DE + QL++ C RP +V+ LD+ + +L +
Sbjct: 259 VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKII 317
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 123/299 (41%), Gaps = 34/299 (11%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGLLQ----DGMLVAIKKRPGAPTQ----EFIDEVCFLA 57
L N S ++G G+FGEV G L+ + VAIK T+ +F+ E +
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 58 SIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXX 117
H N++ L G ++ ++ EY+ NGS+ S + + +F +
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD------SFLRKHDAQFTVIQLVGMLRG 155
Query: 118 XXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI- 176
VH+D N+L++ + + KV+D GL L A +++ I
Sbjct: 156 IASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 177 FLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSN-- 234
+ + E +R+F+ SDV+S+G+ L E++S E + + SN
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE-----------------RPYWEMSNQD 258
Query: 235 LLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLDKEMNLTTV 293
++K +DE + QL++ C RP +V+ LD+ + +L +
Sbjct: 259 VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKII 317
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 126/305 (41%), Gaps = 65/305 (21%)
Query: 14 KNLIGEGKFGEVYKGLLQ-DG--MLVAIKKRPGAPTQE----FIDEVCFLASI-QHRNLV 65
+++IGEG FG+V K ++ DG M AIK+ +++ F E+ L + H N++
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 66 TLLGYCQENNLQFLIYEYIPNGSV----------------SIHLYGPSQVSRQKLEFKHR 109
LLG C+ +L EY P+G++ +I S +S Q+L
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL----- 144
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL--------RNFLGR 161
+ + +H+D N+LV E+++AK+AD GL + +GR
Sbjct: 145 --LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGR 202
Query: 162 TDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXX 221
V ++A E + ++ SDV+S+GV L E+VS
Sbjct: 203 LPVR-----------WMAIESLNYSVYTTNSDVWSYGVLLWEIVS-----LGGTPYCGMT 246
Query: 222 XVELVQNSRDFSNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELD 281
EL + L K L+ +E L+ +C RPS + ++ L+
Sbjct: 247 CAELYEKLPQGYRLEKPLNCD----------DEVYDLMRQCWREKPYERPSFAQILVSLN 296
Query: 282 RTLDK 286
R L++
Sbjct: 297 RMLEE 301
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 123/299 (41%), Gaps = 34/299 (11%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGLLQ----DGMLVAIKKRPGAPTQ----EFIDEVCFLA 57
L N S ++G G+FGEV G L+ + VAIK T+ +F+ E +
Sbjct: 40 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 99
Query: 58 SIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXX 117
H N++ L G ++ ++ EY+ NGS+ S + + +F +
Sbjct: 100 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD------SFLRKHDAQFTVIQLVGMLRG 153
Query: 118 XXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI- 176
VH+D N+L++ + + KV+D GL L A +++ I
Sbjct: 154 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 213
Query: 177 FLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSN-- 234
+ + E +R+F+ SDV+S+G+ L E++S E + + SN
Sbjct: 214 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE-----------------RPYWEMSNQD 256
Query: 235 LLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLDKEMNLTTV 293
++K +DE + QL++ C RP +V+ LD+ + +L +
Sbjct: 257 VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKII 315
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 123/299 (41%), Gaps = 34/299 (11%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGLLQ----DGMLVAIKKRPGAPTQ----EFIDEVCFLA 57
L N S ++G G+FGEV G L+ + VAIK T+ +F+ E +
Sbjct: 30 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 89
Query: 58 SIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXX 117
H N++ L G ++ ++ EY+ NGS+ S + + +F +
Sbjct: 90 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD------SFLRKHDAQFTVIQLVGMLRG 143
Query: 118 XXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI- 176
VH+D N+L++ + + KV+D GL L A +++ I
Sbjct: 144 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 203
Query: 177 FLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSN-- 234
+ + E +R+F+ SDV+S+G+ L E++S E + + SN
Sbjct: 204 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE-----------------RPYWEMSNQD 246
Query: 235 LLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLDKEMNLTTV 293
++K +DE + QL++ C RP +V+ LD+ + +L +
Sbjct: 247 VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKII 305
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 115/281 (40%), Gaps = 19/281 (6%)
Query: 17 IGEGKFGEV---YKGLLQD--GMLVAIKKRPGAPTQEFID---EVCFLASIQHRNLVTLL 68
+G+G FG V LQD G +VA+KK + + D E+ L S+QH N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 69 GYCQ---ENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
G C NL+ LI E++P GS+ +L + K H +
Sbjct: 81 GVCYSAGRRNLK-LIMEFLPYGSLREYL------QKHKERIDHIKLLQYTSQICKGMEYL 133
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFL-ASEVKE 184
R +H+D T N+LV+ + K+ D GL L + + IF A E
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 185 FRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLW 244
+FS SDV+SFGV L EL + E Q +L+++L
Sbjct: 194 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 253
Query: 245 STFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLD 285
+ +E ++ C + + +RPS D+ +D+ D
Sbjct: 254 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 294
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 123/299 (41%), Gaps = 34/299 (11%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGLLQ----DGMLVAIKKRPGAPTQ----EFIDEVCFLA 57
L N S ++G G+FGEV G L+ + VAIK T+ +F+ E +
Sbjct: 13 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 72
Query: 58 SIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXX 117
H N++ L G ++ ++ EY+ NGS+ S + + +F +
Sbjct: 73 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD------SFLRKHDAQFTVIQLVGMLRG 126
Query: 118 XXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI- 176
VH+D N+L++ + + KV+D GL L A +++ I
Sbjct: 127 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 186
Query: 177 FLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSN-- 234
+ + E +R+F+ SDV+S+G+ L E++S E + + SN
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE-----------------RPYWEMSNQD 229
Query: 235 LLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLDKEMNLTTV 293
++K +DE + QL++ C RP +V+ LD+ + +L +
Sbjct: 230 VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKII 288
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 123/299 (41%), Gaps = 34/299 (11%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGLLQ----DGMLVAIKKRPGAPTQ----EFIDEVCFLA 57
L N S ++G G+FGEV G L+ + VAIK T+ +F+ E +
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 58 SIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXX 117
H N++ L G ++ ++ EY+ NGS+ S + + +F +
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD------SFLRKHDAQFTVIQLVGMLRG 155
Query: 118 XXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI- 176
VH+D N+L++ + + KV+D GL L A +++ I
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIR 215
Query: 177 FLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSN-- 234
+ + E +R+F+ SDV+S+G+ L E++S E + + SN
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE-----------------RPYWEMSNQD 258
Query: 235 LLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLDKEMNLTTV 293
++K +DE + QL++ C RP +V+ LD+ + +L +
Sbjct: 259 VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKII 317
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 121/292 (41%), Gaps = 41/292 (14%)
Query: 17 IGEGKFGEVY--------KGLLQDGMLVAIKKRPGAPTQ----EFIDEVCFLASI-QHRN 63
+GEG FG+V K ++ + VA+K T+ + + E+ + I +H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHL-----------YGPSQVSRQKLEFKHRLSI 112
++ LLG C ++ ++I EY G++ +L Y ++V +++ FK +S
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 113 XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT 172
+ +H+D NVLV E+ + K+AD GL + D ++
Sbjct: 155 TYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 212
Query: 173 ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDF 232
++A E R ++ +SDV+SFGV + E+ + VE
Sbjct: 213 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT------LGGSPYPGIPVE-------- 258
Query: 233 SNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
L K+L E E ++ C +RP+ +V +LDR L
Sbjct: 259 -ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 309
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 121/292 (41%), Gaps = 41/292 (14%)
Query: 17 IGEGKFGEVY--------KGLLQDGMLVAIKKRPGAPTQ----EFIDEVCFLASI-QHRN 63
+GEG FG+V K ++ + VA+K T+ + + E+ + I +H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHL-----------YGPSQVSRQKLEFKHRLSI 112
++ LLG C ++ ++I EY G++ +L Y ++V +++ FK +S
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 113 XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT 172
+ +H+D NVLV E+ + K+AD GL + D ++
Sbjct: 152 TYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 209
Query: 173 ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDF 232
++A E R ++ +SDV+SFGV + E+ + VE
Sbjct: 210 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT------LGGSPYPGIPVE-------- 255
Query: 233 SNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
L K+L E E ++ C +RP+ +V +LDR L
Sbjct: 256 -ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 306
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 121/292 (41%), Gaps = 41/292 (14%)
Query: 17 IGEGKFGEVY--------KGLLQDGMLVAIKKRPGAPTQ----EFIDEVCFLASI-QHRN 63
+GEG FG+V K ++ + VA+K T+ + + E+ + I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHL-----------YGPSQVSRQKLEFKHRLSI 112
++ LLG C ++ ++I EY G++ +L Y ++V +++ FK +S
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 113 XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT 172
+ +H+D NVLV E+ + K+AD GL + D ++
Sbjct: 163 TYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 173 ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDF 232
++A E R ++ +SDV+SFGV + E+ + VE
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT------LGGSPYPGIPVE-------- 266
Query: 233 SNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
L K+L E E ++ C +RP+ +V +LDR L
Sbjct: 267 -ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 121/292 (41%), Gaps = 41/292 (14%)
Query: 17 IGEGKFGEVY--------KGLLQDGMLVAIKKRPGAPTQ----EFIDEVCFLASI-QHRN 63
+GEG FG+V K ++ + VA+K T+ + + E+ + I +H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHL-----------YGPSQVSRQKLEFKHRLSI 112
++ LLG C ++ ++I EY G++ +L Y ++V +++ FK +S
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 113 XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT 172
+ +H+D NVLV E+ + K+AD GL + D ++
Sbjct: 209 TYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 266
Query: 173 ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDF 232
++A E R ++ +SDV+SFGV + E+ + VE
Sbjct: 267 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT------LGGSPYPGIPVE-------- 312
Query: 233 SNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
L K+L E E ++ C +RP+ +V +LDR L
Sbjct: 313 -ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 126/305 (41%), Gaps = 65/305 (21%)
Query: 14 KNLIGEGKFGEVYKGLLQ-DG--MLVAIKKRPGAPTQE----FIDEVCFLASI-QHRNLV 65
+++IGEG FG+V K ++ DG M AIK+ +++ F E+ L + H N++
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 66 TLLGYCQENNLQFLIYEYIPNGSV----------------SIHLYGPSQVSRQKLEFKHR 109
LLG C+ +L EY P+G++ +I S +S Q+L
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL----- 134
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL--------RNFLGR 161
+ + +H+D N+LV E+++AK+AD GL + +GR
Sbjct: 135 --LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGR 192
Query: 162 TDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXX 221
V ++A E + ++ SDV+S+GV L E+VS
Sbjct: 193 LPVR-----------WMAIESLNYSVYTTNSDVWSYGVLLWEIVS-----LGGTPYCGMT 236
Query: 222 XVELVQNSRDFSNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELD 281
EL + L K L+ +E L+ +C RPS + ++ L+
Sbjct: 237 CAELYEKLPQGYRLEKPLN----------CDDEVYDLMRQCWREKPYERPSFAQILVSLN 286
Query: 282 RTLDK 286
R L++
Sbjct: 287 RMLEE 291
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 116/276 (42%), Gaps = 32/276 (11%)
Query: 16 LIGEGKFGEVYKGLLQDG----MLVAIKK----RPGAPTQEFIDEVCFLASIQHRNLVTL 67
+IG G FG VY G L D + A+K +F+ E + H N+++L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 68 LGYC-QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXX 126
LG C + ++ Y+ +G + + + K L +
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---- 151
Query: 127 XPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTAD--EIFLASEVKE 184
+ VH+D N ++DE F KVAD GL + + ++ A ++A E +
Sbjct: 152 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQ 209
Query: 185 FRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLW 244
++F+ KSDV+SFGV L EL++ R A V L+Q R LL+
Sbjct: 210 TQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRR----LLQ------- 257
Query: 245 STFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTEL 280
+ +++++C P +E RPS S++V+ +
Sbjct: 258 ---PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 290
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 121/292 (41%), Gaps = 41/292 (14%)
Query: 17 IGEGKFGEVY--------KGLLQDGMLVAIKKRPGAPTQ----EFIDEVCFLASI-QHRN 63
+GEG FG+V K ++ + VA+K T+ + + E+ + I +H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHL-----------YGPSQVSRQKLEFKHRLSI 112
++ LLG C ++ ++I EY G++ +L Y ++V +++ FK +S
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 113 XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT 172
+ +H+D NVLV E+ + K+AD GL + D ++
Sbjct: 150 TYQLARGMEYLASQ--KCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 207
Query: 173 ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDF 232
++A E R ++ +SDV+SFGV + E+ + VE
Sbjct: 208 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT------LGGSPYPGIPVE-------- 253
Query: 233 SNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
L K+L E E ++ C +RP+ +V +LDR L
Sbjct: 254 -ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 304
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 123/299 (41%), Gaps = 34/299 (11%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGLLQ----DGMLVAIKKRPGAPTQ----EFIDEVCFLA 57
L N S ++G G+FGEV G L+ + VAIK T+ +F+ E +
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 58 SIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXX 117
H N++ L G ++ ++ EY+ NGS+ S + + +F +
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD------SFLRKHDAQFTVIQLVGMLRG 155
Query: 118 XXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI- 176
VH+D N+L++ + + KV+D GL L A +++ I
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIR 215
Query: 177 FLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSN-- 234
+ + E +R+F+ SDV+S+G+ L E++S E + + SN
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE-----------------RPYWEMSNQD 258
Query: 235 LLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLDKEMNLTTV 293
++K +DE + QL++ C RP +V+ LD+ + +L +
Sbjct: 259 VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKII 317
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 115/281 (40%), Gaps = 19/281 (6%)
Query: 17 IGEGKFGEV---YKGLLQD--GMLVAIKKRPGAPTQEFID---EVCFLASIQHRNLVTLL 68
+G+G FG V LQD G +VA+KK + + D E+ L S+QH N+V
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 69 GYCQ---ENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
G C NL+ LI EY+P GS+ +L + K H +
Sbjct: 79 GVCYSAGRRNLK-LIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL 131
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFL-ASEVKE 184
R +H++ T N+LV+ + K+ D GL L + + IF A E
Sbjct: 132 GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLT 191
Query: 185 FRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLW 244
+FS SDV+SFGV L EL + E Q +L+++L
Sbjct: 192 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 251
Query: 245 STFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLD 285
+ +E ++ C + + +RPS D+ +D+ D
Sbjct: 252 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 292
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 121/292 (41%), Gaps = 41/292 (14%)
Query: 17 IGEGKFGEVY--------KGLLQDGMLVAIKKRPGAPTQ----EFIDEVCFLASI-QHRN 63
+GEG FG+V K ++ + VA+K T+ + + E+ + I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHL-----------YGPSQVSRQKLEFKHRLSI 112
++ LLG C ++ ++I EY G++ +L Y ++V +++ FK +S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 113 XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT 172
+ +H+D NVLV E+ + ++AD GL + D ++
Sbjct: 163 TYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGR 220
Query: 173 ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDF 232
++A E R ++ +SDV+SFGV + E+ + VE
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT------LGGSPYPGIPVE-------- 266
Query: 233 SNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
L K+L E E ++ C +RP+ +V +LDR L
Sbjct: 267 -ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 116/276 (42%), Gaps = 32/276 (11%)
Query: 16 LIGEGKFGEVYKGLLQDG----MLVAIKK----RPGAPTQEFIDEVCFLASIQHRNLVTL 67
+IG G FG VY G L D + A+K +F+ E + H N+++L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 68 LGYC-QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXX 126
LG C + ++ Y+ +G + + + K L +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---- 152
Query: 127 XPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTAD--EIFLASEVKE 184
+ VH+D N ++DE F KVAD GL + + ++ A ++A E +
Sbjct: 153 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 185 FRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLW 244
++F+ KSDV+SFGV L EL++ R A V L+Q R LL+
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRR----LLQ------- 258
Query: 245 STFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTEL 280
+ +++++C P +E RPS S++V+ +
Sbjct: 259 ---PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 291
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 116/276 (42%), Gaps = 32/276 (11%)
Query: 16 LIGEGKFGEVYKGLLQDG----MLVAIKK----RPGAPTQEFIDEVCFLASIQHRNLVTL 67
+IG G FG VY G L D + A+K +F+ E + H N+++L
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 68 LGYC-QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXX 126
LG C + ++ Y+ +G + + + K L +
Sbjct: 115 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---- 170
Query: 127 XPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI--FLASEVKE 184
+ VH+D N ++DE F KVAD GL + + ++ A ++A E +
Sbjct: 171 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 228
Query: 185 FRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLW 244
++F+ KSDV+SFGV L EL++ R A V L+Q R L
Sbjct: 229 TQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRR-----------LLQ 276
Query: 245 STFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTEL 280
+ + + E ++++C P +E RPS S++V+ +
Sbjct: 277 PEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRI 309
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 116/276 (42%), Gaps = 32/276 (11%)
Query: 16 LIGEGKFGEVYKGLLQDG----MLVAIKK----RPGAPTQEFIDEVCFLASIQHRNLVTL 67
+IG G FG VY G L D + A+K +F+ E + H N+++L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 68 LGYC-QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXX 126
LG C + ++ Y+ +G + + + K L +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---- 152
Query: 127 XPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRT-DVAGPSSQVTADEIFLASEVKE 184
+ VH+D N ++DE F KVAD GL R+ + D + ++A E +
Sbjct: 153 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 185 FRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLW 244
++F+ KSDV+SFGV L EL++ R A V L+Q R LL+
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRR----LLQ------- 258
Query: 245 STFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTEL 280
+ +++++C P +E RPS S++V+ +
Sbjct: 259 ---PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 291
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 116/276 (42%), Gaps = 32/276 (11%)
Query: 16 LIGEGKFGEVYKGLLQDG----MLVAIKK----RPGAPTQEFIDEVCFLASIQHRNLVTL 67
+IG G FG VY G L D + A+K +F+ E + H N+++L
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 68 LGYC-QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXX 126
LG C + ++ Y+ +G + + + K L +
Sbjct: 94 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---- 149
Query: 127 XPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTAD--EIFLASEVKE 184
+ VH+D N ++DE F KVAD GL + + ++ A ++A E +
Sbjct: 150 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 207
Query: 185 FRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLW 244
++F+ KSDV+SFGV L EL++ R A V L+Q R LL+
Sbjct: 208 TQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRR----LLQ------- 255
Query: 245 STFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTEL 280
+ +++++C P +E RPS S++V+ +
Sbjct: 256 ---PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 288
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 116/276 (42%), Gaps = 32/276 (11%)
Query: 16 LIGEGKFGEVYKGLLQDG----MLVAIKK----RPGAPTQEFIDEVCFLASIQHRNLVTL 67
+IG G FG VY G L D + A+K +F+ E + H N+++L
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 68 LGYC-QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXX 126
LG C + ++ Y+ +G + + + K L +
Sbjct: 116 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---- 171
Query: 127 XPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI--FLASEVKE 184
+ VH+D N ++DE F KVAD GL + + ++ A ++A E +
Sbjct: 172 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 229
Query: 185 FRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLW 244
++F+ KSDV+SFGV L EL++ R A V L+Q R L
Sbjct: 230 TQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRR-----------LLQ 277
Query: 245 STFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTEL 280
+ + + E ++++C P +E RPS S++V+ +
Sbjct: 278 PEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRI 310
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 116/276 (42%), Gaps = 32/276 (11%)
Query: 16 LIGEGKFGEVYKGLLQDG----MLVAIKK----RPGAPTQEFIDEVCFLASIQHRNLVTL 67
+IG G FG VY G L D + A+K +F+ E + H N+++L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 68 LGYC-QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXX 126
LG C + ++ Y+ +G + + + K L +
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---- 151
Query: 127 XPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTAD--EIFLASEVKE 184
+ VH+D N ++DE F KVAD GL + + ++ A ++A E +
Sbjct: 152 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 209
Query: 185 FRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLW 244
++F+ KSDV+SFGV L EL++ R A V L+Q R L
Sbjct: 210 TQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRR-----------LLQ 257
Query: 245 STFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTEL 280
+ + + E ++++C P +E RPS S++V+ +
Sbjct: 258 PEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRI 290
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 116/276 (42%), Gaps = 32/276 (11%)
Query: 16 LIGEGKFGEVYKGLLQDG----MLVAIKK----RPGAPTQEFIDEVCFLASIQHRNLVTL 67
+IG G FG VY G L D + A+K +F+ E + H N+++L
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 68 LGYC-QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXX 126
LG C + ++ Y+ +G + + + K L +
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---- 157
Query: 127 XPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRT-DVAGPSSQVTADEIFLASEVKE 184
+ VH+D N ++DE F KVAD GL R+ + D + ++A E +
Sbjct: 158 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 215
Query: 185 FRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLW 244
++F+ KSDV+SFGV L EL++ R A V L+Q R L
Sbjct: 216 TQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRR-----------LLQ 263
Query: 245 STFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTEL 280
+ + + E ++++C P +E RPS S++V+ +
Sbjct: 264 PEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRI 296
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 116/276 (42%), Gaps = 32/276 (11%)
Query: 16 LIGEGKFGEVYKGLLQDG----MLVAIKK----RPGAPTQEFIDEVCFLASIQHRNLVTL 67
+IG G FG VY G L D + A+K +F+ E + H N+++L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 68 LGYC-QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXX 126
LG C + ++ Y+ +G + + + K L +
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---- 150
Query: 127 XPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTAD--EIFLASEVKE 184
+ VH+D N ++DE F KVAD GL + + ++ A ++A E +
Sbjct: 151 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 208
Query: 185 FRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLW 244
++F+ KSDV+SFGV L EL++ R A V L+Q R LL+
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRR----LLQ------- 256
Query: 245 STFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTEL 280
+ +++++C P +E RPS S++V+ +
Sbjct: 257 ---PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 289
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 116/276 (42%), Gaps = 32/276 (11%)
Query: 16 LIGEGKFGEVYKGLLQDG----MLVAIKK----RPGAPTQEFIDEVCFLASIQHRNLVTL 67
+IG G FG VY G L D + A+K +F+ E + H N+++L
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 68 LGYC-QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXX 126
LG C + ++ Y+ +G + + + K L +
Sbjct: 92 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---- 147
Query: 127 XPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTAD--EIFLASEVKE 184
+ VH+D N ++DE F KVAD GL + + ++ A ++A E +
Sbjct: 148 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 205
Query: 185 FRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLW 244
++F+ KSDV+SFGV L EL++ R A V L+Q R LL+
Sbjct: 206 TQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRR----LLQ------- 253
Query: 245 STFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTEL 280
+ +++++C P +E RPS S++V+ +
Sbjct: 254 ---PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 286
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 116/276 (42%), Gaps = 32/276 (11%)
Query: 16 LIGEGKFGEVYKGLLQDG----MLVAIKK----RPGAPTQEFIDEVCFLASIQHRNLVTL 67
+IG G FG VY G L D + A+K +F+ E + H N+++L
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 68 LGYC-QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXX 126
LG C + ++ Y+ +G + + + K L +
Sbjct: 89 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---- 144
Query: 127 XPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI--FLASEVKE 184
+ VH+D N ++DE F KVAD GL + + ++ A ++A E +
Sbjct: 145 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 202
Query: 185 FRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLW 244
++F+ KSDV+SFGV L EL++ R A V L+Q R LL+
Sbjct: 203 TQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRR----LLQ------- 250
Query: 245 STFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTEL 280
+ +++++C P +E RPS S++V+ +
Sbjct: 251 ---PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 283
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 116/276 (42%), Gaps = 32/276 (11%)
Query: 16 LIGEGKFGEVYKGLLQDG----MLVAIKK----RPGAPTQEFIDEVCFLASIQHRNLVTL 67
+IG G FG VY G L D + A+K +F+ E + H N+++L
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 68 LGYC-QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXX 126
LG C + ++ Y+ +G + + + K L +
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---- 211
Query: 127 XPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRT-DVAGPSSQVTADEIFLASEVKE 184
+ VH+D N ++DE F KVAD GL R+ + D + ++A E +
Sbjct: 212 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 269
Query: 185 FRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLW 244
++F+ KSDV+SFGV L EL++ R A V L+Q R L
Sbjct: 270 TQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRR-----------LLQ 317
Query: 245 STFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTEL 280
+ + + E ++++C P +E RPS S++V+ +
Sbjct: 318 PEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRI 350
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 116/276 (42%), Gaps = 32/276 (11%)
Query: 16 LIGEGKFGEVYKGLLQDG----MLVAIKK----RPGAPTQEFIDEVCFLASIQHRNLVTL 67
+IG G FG VY G L D + A+K +F+ E + H N+++L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 68 LGYC-QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXX 126
LG C + ++ Y+ +G + + + K L +
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---- 150
Query: 127 XPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRT-DVAGPSSQVTADEIFLASEVKE 184
+ VH+D N ++DE F KVAD GL R+ + D + ++A E +
Sbjct: 151 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 208
Query: 185 FRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLW 244
++F+ KSDV+SFGV L EL++ R A V L+Q R LL+
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRR----LLQ------- 256
Query: 245 STFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTEL 280
+ +++++C P +E RPS S++V+ +
Sbjct: 257 ---PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 289
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 116/276 (42%), Gaps = 32/276 (11%)
Query: 16 LIGEGKFGEVYKGLLQDG----MLVAIKK----RPGAPTQEFIDEVCFLASIQHRNLVTL 67
+IG G FG VY G L D + A+K +F+ E + H N+++L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 68 LGYC-QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXX 126
LG C + ++ Y+ +G + + + K L +
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---- 153
Query: 127 XPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRT-DVAGPSSQVTADEIFLASEVKE 184
+ VH+D N ++DE F KVAD GL R+ + D + ++A E +
Sbjct: 154 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 185 FRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLW 244
++F+ KSDV+SFGV L EL++ R A V L+Q R LL+
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRR----LLQ------- 259
Query: 245 STFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTEL 280
+ +++++C P +E RPS S++V+ +
Sbjct: 260 ---PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 292
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 116/276 (42%), Gaps = 32/276 (11%)
Query: 16 LIGEGKFGEVYKGLLQDG----MLVAIKK----RPGAPTQEFIDEVCFLASIQHRNLVTL 67
+IG G FG VY G L D + A+K +F+ E + H N+++L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 68 LGYC-QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXX 126
LG C + ++ Y+ +G + + + K L +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---- 152
Query: 127 XPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRT-DVAGPSSQVTADEIFLASEVKE 184
+ VH+D N ++DE F KVAD GL R+ + D + ++A E +
Sbjct: 153 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 185 FRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLW 244
++F+ KSDV+SFGV L EL++ R A V L+Q R LL+
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRR----LLQ------- 258
Query: 245 STFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTEL 280
+ +++++C P +E RPS S++V+ +
Sbjct: 259 ---PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 291
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 116/276 (42%), Gaps = 32/276 (11%)
Query: 16 LIGEGKFGEVYKGLLQDG----MLVAIKK----RPGAPTQEFIDEVCFLASIQHRNLVTL 67
+IG G FG VY G L D + A+K +F+ E + H N+++L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 68 LGYC-QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXX 126
LG C + ++ Y+ +G + + + K L +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---- 152
Query: 127 XPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTAD--EIFLASEVKE 184
+ VH+D N ++DE F KVAD GL + + ++ A ++A E +
Sbjct: 153 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 185 FRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLW 244
++F+ KSDV+SFGV L EL++ R A V L+Q R LL+
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRR----LLQ------- 258
Query: 245 STFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTEL 280
+ +++++C P +E RPS S++V+ +
Sbjct: 259 ---PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 291
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 111/275 (40%), Gaps = 27/275 (9%)
Query: 10 NFSDKNLIGEGKFGEVYKG-LLQDGMLVAIKK------RPGAPTQEFIDEVCFLASIQHR 62
NF + IG G+F EVY+ L DG+ VA+KK + I E+ L + H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 63 NLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXX 122
N++ E+N ++ E G +S + +QK R
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMI---KHFKKQKRLIPERTVWKYFVQLCSAL 149
Query: 123 XXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEV 182
RV+H+D K ANV + + K+ D GL F A S + +++ E
Sbjct: 150 EHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGTPYYMSPER 207
Query: 183 KEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDER 242
++ KSD++S G L E+ + + + + +L K +++
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEMAALQSP--------------FYGDKMNLYSLCKKIEQC 253
Query: 243 LWSTFTNEGM-EEFIQLIVRCLDPSSERRPSMSDV 276
+ ++ EE QL+ C++P E+RP ++ V
Sbjct: 254 DYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYV 288
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 113/278 (40%), Gaps = 30/278 (10%)
Query: 16 LIGEGKFGEVYKGLLQ----DGMLVAIKKRPGAPTQ----EFIDEVCFLASIQHRNLVTL 67
+IG G+FGEV G L+ + VAIK T+ +F+ E + H N++ L
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 68 LGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXX 127
G ++ ++ EY+ NGS+ L + +F +
Sbjct: 89 EGVVTKSKPVMIVTEYMENGSLDTFL------KKNDGQFTVIQLVGMLRGISAGMKYLSD 142
Query: 128 PRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI-FLASEVKEFR 186
VH+D N+L++ + + KV+D GL L A +++ I + A E FR
Sbjct: 143 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFR 202
Query: 187 RFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLWST 246
+F+ SDV+S+G+ + E+VS E +++K ++E
Sbjct: 203 KFTSASDVWSYGIVMWEVVSYGERPYWEMTN---------------QDVIKAVEEGYRLP 247
Query: 247 FTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
+ QL++ C RP ++V LD+ +
Sbjct: 248 SPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKLI 285
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 125/304 (41%), Gaps = 46/304 (15%)
Query: 1 MEELSLATKNFSDKNLIGEGKFGEVYKGLL------QDGMLVAIK----KRPGAPTQEFI 50
++E+SL+ F ++ +GE +FG+VYKG L + VAIK K G +EF
Sbjct: 20 LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 77
Query: 51 DEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVS---------- 100
E A +QH N+V LLG ++ +I+ Y +G + L S S
Sbjct: 78 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 137
Query: 101 -RQKLE---FKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLR 156
+ LE F H ++ VVHKD T NVLV + K++D GL
Sbjct: 138 VKSALEPPDFVHLVA-----QIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLF 192
Query: 157 NFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXX 216
+ D ++A E + +FS SD++S+GV L E+ S
Sbjct: 193 REVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS--YGLQPYCG 250
Query: 217 XXXXXXVELVQNSRDFSNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDV 276
VE+++N + +L D+ + L++ C + RRP D+
Sbjct: 251 YSNQDVVEMIRNRQ----VLPCPDDCPAWVYA---------LMIECWNEFPSRRPRFKDI 297
Query: 277 VTEL 280
+ L
Sbjct: 298 HSRL 301
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 125/304 (41%), Gaps = 46/304 (15%)
Query: 1 MEELSLATKNFSDKNLIGEGKFGEVYKGLL------QDGMLVAIK----KRPGAPTQEFI 50
++E+SL+ F ++ +GE +FG+VYKG L + VAIK K G +EF
Sbjct: 3 LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 60
Query: 51 DEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVS---------- 100
E A +QH N+V LLG ++ +I+ Y +G + L S S
Sbjct: 61 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 120
Query: 101 -RQKLE---FKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLR 156
+ LE F H ++ VVHKD T NVLV + K++D GL
Sbjct: 121 VKSALEPPDFVHLVA-----QIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLF 175
Query: 157 NFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXX 216
+ D ++A E + +FS SD++S+GV L E+ S
Sbjct: 176 REVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS--YGLQPYCG 233
Query: 217 XXXXXXVELVQNSRDFSNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDV 276
VE+++N + +L D+ + L++ C + RRP D+
Sbjct: 234 YSNQDVVEMIRNRQ----VLPCPDDCPAWVYA---------LMIECWNEFPSRRPRFKDI 280
Query: 277 VTEL 280
+ L
Sbjct: 281 HSRL 284
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 113/268 (42%), Gaps = 36/268 (13%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPTQE-FIDEVCFLASIQHRNLVTLLGYCQEN 74
+G G+FGEV+ VA+K +PG+ + E F+ E + ++QH LV L +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKE 249
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKD 134
+ ++I E++ GS+ + + S+Q L +L I +H+D
Sbjct: 250 PI-YIITEFMAKGSL-LDFLKSDEGSKQPLP---KL-IDFSAQIAEGMAFIEQRNYIHRD 303
Query: 135 FKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDV 194
+ AN+LV + K+AD GL + + + A E F F+ KSDV
Sbjct: 304 LRAANILVSASLVCKIADFGLARVGAKFPIK-----------WTAPEAINFGSFTIKSDV 352
Query: 195 YSFGVFLLELVS-GREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLWSTFTNEGME 253
+SFG+ L+E+V+ GR + +++ L+ E
Sbjct: 353 WSFGILLMEIVTYGR----------------IPYPGMSNPEVIRALERGYRMPRPENCPE 396
Query: 254 EFIQLIVRCLDPSSERRPSMSDVVTELD 281
E +++RC E RP+ + + LD
Sbjct: 397 ELYNIMMRCWKNRPEERPTFEYIQSVLD 424
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 118/277 (42%), Gaps = 44/277 (15%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPTQE-FIDEVCFLASIQHRNLVTLLGYCQEN 74
+G G+FGEV+ VA+K +PG+ + E F+ E + ++QH LV L +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKE 82
Query: 75 NLQFLIYEYIPNGSVSIHLY---GPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVV 131
+ ++I E++ GS+ L G Q + ++F +++ +
Sbjct: 83 PI-YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIA--------EGMAFIEQRNYI 133
Query: 132 HKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE------IFLASEVKEF 185
H+D + AN+LV + K+AD GL + ++ TA E + A E F
Sbjct: 134 HRDLRAANILVSASLVCKIADFGLARVIE-------DNEYTAREGAKFPIKWTAPEAINF 186
Query: 186 RRFSEKSDVYSFGVFLLELVS-GREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLW 244
F+ KSDV+SFG+ L+E+V+ GR + +++ L+
Sbjct: 187 GSFTIKSDVWSFGILLMEIVTYGR----------------IPYPGMSNPEVIRALERGYR 230
Query: 245 STFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELD 281
EE +++RC E RP+ + + LD
Sbjct: 231 MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 267
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 119/283 (42%), Gaps = 34/283 (12%)
Query: 14 KNLIGEGKFGEVYKGLLQ----DGMLVAIKKRPGAPTQ----EFIDEVCFLASIQHRNLV 65
+ +IG G+FGEV G L+ + VAIK T+ +F+ E + H N++
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 66 TLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
L G ++ +I E++ NGS+ S + + +F +
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLD------SFLRQNDGQFTVIQLVGMLRGIAAGMKYL 125
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPS-SQVTADEI---FLASE 181
VH+ N+LV+ + + KV+D GL FL D + P+ + +I + A E
Sbjct: 126 ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFL-EDDTSDPTYTSALGGKIPIRWTAPE 184
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDE 241
++R+F+ SDV+S+G+ + E++S E ++D N ++ D
Sbjct: 185 AIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD------------MTNQDVINAIE-QDY 231
Query: 242 RLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
RL + QL++ C RP +V LD+ +
Sbjct: 232 RLPPPM--DCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMI 272
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 84/197 (42%), Gaps = 15/197 (7%)
Query: 17 IGEGKFGEVYKGLLQ-DGMLVAIKK----RPGAPTQEFIDEVCFLASIQHRNLVTLLGYC 71
IG G FGEV+ G L+ D LVA+K P +F+ E L H N+V L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 72 QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVV 131
+ +++ E + G L + +L K L + +
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFL----RTEGARLRVKTLLQMVGDAAAGMEYLESKC--CI 235
Query: 132 HKDFKTANVLVDEDFIAKVADAGL--RNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
H+D N LV E + K++D G+ G +G QV + A E + R+S
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVK--WTAPEALNYGRYS 293
Query: 190 EKSDVYSFGVFLLELVS 206
+SDV+SFG+ L E S
Sbjct: 294 SESDVWSFGILLWETFS 310
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 120/292 (41%), Gaps = 41/292 (14%)
Query: 17 IGEGKFGEVY--------KGLLQDGMLVAIKKRPGAPTQ----EFIDEVCFLASI-QHRN 63
+GEG FG+V K ++ + VA+K T+ + + E+ + I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHL-----------YGPSQVSRQKLEFKHRLSI 112
++ LLG C ++ ++I Y G++ +L Y ++V +++ FK +S
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 113 XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT 172
+ +H+D NVLV E+ + K+AD GL + D ++
Sbjct: 163 TYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 173 ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDF 232
++A E R ++ +SDV+SFGV + E+ + VE
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT------LGGSPYPGIPVE-------- 266
Query: 233 SNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
L K+L E E ++ C +RP+ +V +LDR L
Sbjct: 267 -ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 117/274 (42%), Gaps = 38/274 (13%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK-RPGAPTQE-FIDEVCFLASIQHRNLVTLLGYCQEN 74
+G G+FGEV+ VA+K +PG+ + E F+ E + ++QH LV L +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKE 255
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKD 134
+ ++I E++ GS+ + + S+Q L +L I +H+D
Sbjct: 256 PI-YIITEFMAKGSL-LDFLKSDEGSKQPLP---KL-IDFSAQIAEGMAFIEQRNYIHRD 309
Query: 135 FKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE------IFLASEVKEFRRF 188
+ AN+LV + K+AD GL + ++ TA E + A E F F
Sbjct: 310 LRAANILVSASLVCKIADFGLARVI-------EDNEYTAREGAKFPIKWTAPEAINFGSF 362
Query: 189 SEKSDVYSFGVFLLELVS-GREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLWSTF 247
+ KSDV+SFG+ L+E+V+ GR + +++ L+
Sbjct: 363 TIKSDVWSFGILLMEIVTYGR----------------IPYPGMSNPEVIRALERGYRMPR 406
Query: 248 TNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELD 281
EE +++RC E RP+ + + LD
Sbjct: 407 PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 440
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 126/305 (41%), Gaps = 65/305 (21%)
Query: 14 KNLIGEGKFGEVYKGLLQ-DG--MLVAIKKRPGAPTQE----FIDEVCFLASI-QHRNLV 65
+++IGEG FG+V K ++ DG M AIK+ +++ F E+ L + H N++
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 66 TLLGYCQENNLQFLIYEYIPNGSV----------------SIHLYGPSQVSRQKLEFKHR 109
LLG C+ +L EY P+G++ +I S +S Q+L
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL----- 141
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL--------RNFLGR 161
+ + +H++ N+LV E+++AK+AD GL + +GR
Sbjct: 142 --LHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGR 199
Query: 162 TDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXX 221
V ++A E + ++ SDV+S+GV L E+VS
Sbjct: 200 LPVR-----------WMAIESLNYSVYTTNSDVWSYGVLLWEIVS-----LGGTPYCGMT 243
Query: 222 XVELVQNSRDFSNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELD 281
EL + L K L+ +E L+ +C RPS + ++ L+
Sbjct: 244 CAELYEKLPQGYRLEKPLN----------CDDEVYDLMRQCWREKPYERPSFAQILVSLN 293
Query: 282 RTLDK 286
R L++
Sbjct: 294 RMLEE 298
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 34/206 (16%)
Query: 17 IGEGKFGEVYKGLLQD-GMLVAIKKRP-GAPTQEFIDEVCFLASIQHRNLVTLLGYCQEN 74
+GEG +G VYK + ++ G +VAIK+ P + QE I E+ + ++V G +N
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKN 96
Query: 75 NLQFLIYEYIPNGSVS--IHLYGPS----------QVSRQKLEFKHRLSIXXXXXXXXXX 122
+++ EY GSVS I L + Q + + LE+ H +
Sbjct: 97 TDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM------------ 144
Query: 123 XXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEV 182
R +H+D K N+L++ + AK+AD G+ L TD + V ++A EV
Sbjct: 145 ------RKIHRDIKAGNILLNTEGHAKLADFGVAGQL--TDXMAKRNXVIGTPFWMAPEV 196
Query: 183 KEFRRFSEKSDVYSFGVFLLELVSGR 208
+ ++ +D++S G+ +E+ G+
Sbjct: 197 IQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 120/292 (41%), Gaps = 41/292 (14%)
Query: 17 IGEGKFGEVY--------KGLLQDGMLVAIKKRPGAPTQ----EFIDEVCFLASI-QHRN 63
+GEG FG+V K ++ + VA+K T+ + + E+ + I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHL-----------YGPSQVSRQKLEFKHRLSI 112
++ LLG C ++ ++I Y G++ +L Y ++V +++ FK +S
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 113 XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT 172
+ +H+D NVLV E+ + K+AD GL + D ++
Sbjct: 163 TYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 173 ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDF 232
++A E R ++ +SDV+SFGV + E+ + VE
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT------LGGSPYPGIPVE-------- 266
Query: 233 SNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
L K+L E E ++ C +RP+ +V +LDR L
Sbjct: 267 -ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 84/197 (42%), Gaps = 15/197 (7%)
Query: 17 IGEGKFGEVYKGLLQ-DGMLVAIKK----RPGAPTQEFIDEVCFLASIQHRNLVTLLGYC 71
IG G FGEV+ G L+ D LVA+K P +F+ E L H N+V L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 72 QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVV 131
+ +++ E + G L + +L K L + +
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFL----RTEGARLRVKTLLQMVGDAAAGMEYLESKC--CI 235
Query: 132 HKDFKTANVLVDEDFIAKVADAGL--RNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
H+D N LV E + K++D G+ G +G QV + A E + R+S
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVK--WTAPEALNYGRYS 293
Query: 190 EKSDVYSFGVFLLELVS 206
+SDV+SFG+ L E S
Sbjct: 294 SESDVWSFGILLWETFS 310
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 15/195 (7%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIK--KRPGAPTQEFIDEVCFLASIQHRNLVTLLGYCQEN 74
+G G+FG V G + VA+K K EF E + + H LV G C +
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKE 75
Query: 75 NLQFLIYEYIPNGSVSIHL--YGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVH 132
+++ EYI NG + +L +G Q LE + + + +H
Sbjct: 76 YPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVC--------EGMAFLESHQFIH 127
Query: 133 KDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEK 191
+D N LVD D KV+D G+ R L V+ ++ + A EV + ++S K
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVK--WSAPEVFHYFKYSSK 185
Query: 192 SDVYSFGVFLLELVS 206
SDV++FG+ + E+ S
Sbjct: 186 SDVWAFGILMWEVFS 200
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 122/299 (40%), Gaps = 34/299 (11%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGLLQ----DGMLVAIKKRPGAPTQ----EFIDEVCFLA 57
L N S ++G G+FGEV G L+ + VAIK T+ +F+ E +
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 58 SIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXX 117
H N++ L G ++ ++ E + NGS+ S + + +F +
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD------SFLRKHDAQFTVIQLVGMLRG 155
Query: 118 XXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI- 176
VH+D N+L++ + + KV+D GL L A +++ I
Sbjct: 156 IASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 177 FLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSN-- 234
+ + E +R+F+ SDV+S+G+ L E++S E + + SN
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE-----------------RPYWEMSNQD 258
Query: 235 LLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLDKEMNLTTV 293
++K +DE + QL++ C RP +V+ LD+ + +L +
Sbjct: 259 VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKII 317
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 122/299 (40%), Gaps = 34/299 (11%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGLLQ----DGMLVAIKKRPGAPTQ----EFIDEVCFLA 57
L N S ++G G+FGEV G L+ + VAIK T+ +F+ E +
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 58 SIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXX 117
H N++ L G ++ ++ E + NGS+ S + + +F +
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD------SFLRKHDAQFTVIQLVGMLRG 155
Query: 118 XXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI- 176
VH+D N+L++ + + KV+D GL L A +++ I
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 177 FLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSN-- 234
+ + E +R+F+ SDV+S+G+ L E++S E + + SN
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE-----------------RPYWEMSNQD 258
Query: 235 LLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLDKEMNLTTV 293
++K +DE + QL++ C RP +V+ LD+ + +L +
Sbjct: 259 VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKII 317
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 122/299 (40%), Gaps = 34/299 (11%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGLLQ----DGMLVAIKKRPGAPTQ----EFIDEVCFLA 57
L N S ++G G+FGEV G L+ + VAIK T+ +F+ E +
Sbjct: 13 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 72
Query: 58 SIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXX 117
H N++ L G ++ ++ E + NGS+ S + + +F +
Sbjct: 73 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD------SFLRKHDAQFTVIQLVGMLRG 126
Query: 118 XXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI- 176
VH+D N+L++ + + KV+D GL L A +++ I
Sbjct: 127 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 186
Query: 177 FLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSN-- 234
+ + E +R+F+ SDV+S+G+ L E++S E + + SN
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE-----------------RPYWEMSNQD 229
Query: 235 LLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLDKEMNLTTV 293
++K +DE + QL++ C RP +V+ LD+ + +L +
Sbjct: 230 VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKII 288
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 16/197 (8%)
Query: 17 IGEGKFGEVYKGLLQD----GMLVAIKKRPGAPT----QEFIDEVCFLASIQHRNLVTLL 68
IGEG+FG+V++G+ M VAIK + ++F+ E + H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 69 GYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
G EN + ++I E G + L QV + L+ I
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFL----QVRKYSLDLASL--ILYAYQLSTALAYLESK 130
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRF 188
R VH+D NVLV + K+ D GL ++ + S + ++A E FRRF
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESINFRRF 189
Query: 189 SEKSDVYSFGVFLLELV 205
+ SDV+ FGV + E++
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 127/294 (43%), Gaps = 42/294 (14%)
Query: 5 SLATKNFSDKNLIGEGKFGEVYKG-LLQDGMLVAIKKRPGAPT----------QEFIDEV 53
+LA + IG+G FG V+KG L++D +VAIK + QEF EV
Sbjct: 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREV 74
Query: 54 CFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIX 113
++++ H N+V L G +N ++ E++P G + L + + ++ + L I
Sbjct: 75 FIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIA 132
Query: 114 XXXXXXXXXXXXXXPRVVHKDFKTANVLV---DED--FIAKVADAGL--RNFLGRTDVAG 166
P +VH+D ++ N+ + DE+ AKVAD GL ++ + + G
Sbjct: 133 LGIEYMQNQN----PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLG 188
Query: 167 PSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELV 226
+ Q A E A E ++EK+D YSF + L +++G E
Sbjct: 189 -NFQWMAPETIGAEE----ESYTEKADTYSFAMILYTILTGEGPFD-----------EYS 232
Query: 227 QNSRDFSNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTEL 280
F N+++ +E L T + +I C ++RP S +V EL
Sbjct: 233 YGKIKFINMIR--EEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 16/197 (8%)
Query: 17 IGEGKFGEVYKGLLQD----GMLVAIKKRPGAPT----QEFIDEVCFLASIQHRNLVTLL 68
IGEG+FG+V++G+ M VAIK + ++F+ E + H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 69 GYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
G EN + ++I E G + L QV + L+ I
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFL----QVRKFSLDLASL--ILYAYQLSTALAYLESK 130
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRF 188
R VH+D NVLV + K+ D GL ++ +S+ ++A E FRRF
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTXXKASKGKLPIKWMAPESINFRRF 189
Query: 189 SEKSDVYSFGVFLLELV 205
+ SDV+ FGV + E++
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 122/278 (43%), Gaps = 33/278 (11%)
Query: 12 SDKNLIGEGKFGEVYKGL-LQDGMLVAIKKRP---GAPTQEFIDEVCFLASIQHRNLVTL 67
D+ ++G+G +G VY G L + + +AIK+ P +Q +E+ ++H+N+V
Sbjct: 11 GDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQY 70
Query: 68 LGYCQENNLQFLIYEYIPNGSVSIHL---YGPSQVSRQKLEFKHRLSIXXXXXXXXXXXX 124
LG EN + E +P GS+S L +GP + + Q + F + +
Sbjct: 71 LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN--- 127
Query: 125 XXXPRVVHKDFKTANVLVDE-DFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEV- 182
++VH+D K NVL++ + K++D G L + + T ++A E+
Sbjct: 128 ----QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPC--TETFTGTLQYMAPEII 181
Query: 183 -KEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDE 241
K R + + +D++S G ++E+ +G+ + + + K+
Sbjct: 182 DKGPRGYGKAADIWSLGCTIIEMATGKPP--------------FYELGEPQAAMFKVGMF 227
Query: 242 RLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTE 279
++ E I++C +P ++R +D++ +
Sbjct: 228 KVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVD 265
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 114/282 (40%), Gaps = 34/282 (12%)
Query: 14 KNLIGEGKFGEVYKGLLQ----DGMLVAIKKRPGAPT----QEFIDEVCFLASIQHRNLV 65
+ +IG G+FGEV G L+ + VAIK T ++F+ E + H N++
Sbjct: 34 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 93
Query: 66 TLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
L G + +I EY+ NGS+ L + F +
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSLDAFL------RKNDGRFTVIQLVGMLRGIGSGMKYL 147
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI-FLASEVKE 184
VH+D N+LV+ + + KV+D G+ L A +++ I + A E
Sbjct: 148 SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 207
Query: 185 FRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSN--LLKILDER 242
+R+F+ SDV+S+G+ + E++S E + D SN ++K ++E
Sbjct: 208 YRKFTSASDVWSYGIVMWEVMSYGE-----------------RPYWDMSNQDVIKAIEEG 250
Query: 243 LWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
+ QL++ C RP +V LD+ +
Sbjct: 251 YRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLI 292
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 122/278 (43%), Gaps = 33/278 (11%)
Query: 12 SDKNLIGEGKFGEVYKGL-LQDGMLVAIKKRP---GAPTQEFIDEVCFLASIQHRNLVTL 67
D+ ++G+G +G VY G L + + +AIK+ P +Q +E+ ++H+N+V
Sbjct: 25 GDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQY 84
Query: 68 LGYCQENNLQFLIYEYIPNGSVSIHL---YGPSQVSRQKLEFKHRLSIXXXXXXXXXXXX 124
LG EN + E +P GS+S L +GP + + Q + F + +
Sbjct: 85 LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN--- 141
Query: 125 XXXPRVVHKDFKTANVLVDE-DFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEV- 182
++VH+D K NVL++ + K++D G L + + T ++A E+
Sbjct: 142 ----QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPC--TETFTGTLQYMAPEII 195
Query: 183 -KEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDE 241
K R + + +D++S G ++E+ +G+ + + + K+
Sbjct: 196 DKGPRGYGKAADIWSLGCTIIEMATGKPP--------------FYELGEPQAAMFKVGMF 241
Query: 242 RLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTE 279
++ E I++C +P ++R +D++ +
Sbjct: 242 KVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVD 279
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 114/282 (40%), Gaps = 34/282 (12%)
Query: 14 KNLIGEGKFGEVYKGLLQ----DGMLVAIKKRPGAPT----QEFIDEVCFLASIQHRNLV 65
+ +IG G+FGEV G L+ + VAIK T ++F+ E + H N++
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 66 TLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
L G + +I EY+ NGS+ L + F +
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFL------RKNDGRFTVIQLVGMLRGIGSGMKYL 132
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI-FLASEVKE 184
VH+D N+LV+ + + KV+D G+ L A +++ I + A E
Sbjct: 133 SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 192
Query: 185 FRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSN--LLKILDER 242
+R+F+ SDV+S+G+ + E++S E + D SN ++K ++E
Sbjct: 193 YRKFTSASDVWSYGIVMWEVMSYGE-----------------RPYWDMSNQDVIKAIEEG 235
Query: 243 LWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
+ QL++ C RP +V LD+ +
Sbjct: 236 YRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLI 277
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 114/282 (40%), Gaps = 34/282 (12%)
Query: 14 KNLIGEGKFGEVYKGLLQ----DGMLVAIKKRPGAPT----QEFIDEVCFLASIQHRNLV 65
+ +IG G+FGEV G L+ + VAIK T ++F+ E + H N++
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 66 TLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
L G + +I EY+ NGS+ L + F +
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFL------RKNDGRFTVIQLVGMLRGIGSGMKYL 126
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI-FLASEVKE 184
VH+D N+LV+ + + KV+D G+ L A +++ I + A E
Sbjct: 127 SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 186
Query: 185 FRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSN--LLKILDER 242
+R+F+ SDV+S+G+ + E++S E + D SN ++K ++E
Sbjct: 187 YRKFTSASDVWSYGIVMWEVMSYGE-----------------RPYWDMSNQDVIKAIEEG 229
Query: 243 LWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
+ QL++ C RP +V LD+ +
Sbjct: 230 YRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLI 271
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 133/310 (42%), Gaps = 40/310 (12%)
Query: 15 NLIGEGKFGEVYKGL-LQDG----MLVAIK-----KRPGAPTQEFIDEVCFLASIQHRNL 64
++G G FG VYKG+ + DG + VAIK P A +E +DE +A + +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKA-NKEILDEAYVMAGVGSPYV 81
Query: 65 VTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXX 124
LLG C + +Q L+ + +P G + H+ + +R +L + L+
Sbjct: 82 SRLLGICLTSTVQ-LVTQLMPYGCLLDHV----RENRGRLGSQDLLNWCMQIAKGMSYLE 136
Query: 125 XXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFL--GRTDVAGPSSQVTADEIFLASEV 182
R+VH+D NVLV K+ D GL L T+ +V + L S +
Sbjct: 137 DV--RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESIL 194
Query: 183 KEFRRFSEKSDVYSFGVFLLELVS-GREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDE 241
+ RRF+ +SDV+S+GV + EL++ G + +R+ +LL+ E
Sbjct: 195 R--RRFTHQSDVWSYGVTVWELMTFGAKPYDGI-------------PAREIPDLLE-KGE 238
Query: 242 RLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLDKEMNLTTVMGEGT-PT 300
RL + ++V+C SE RP ++V+E R + E P
Sbjct: 239 RLPQPPIC--TIDVYMIMVKCWMIDSECRPRFRELVSEFSRMARDPQRFVVIQNEDLGPA 296
Query: 301 VTLGSHLFRA 310
L S +R+
Sbjct: 297 SPLDSTFYRS 306
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 16/197 (8%)
Query: 17 IGEGKFGEVYKGLLQD----GMLVAIKKRPGAPT----QEFIDEVCFLASIQHRNLVTLL 68
IGEG+FG+V++G+ + VAIK + ++F+ E + H ++V L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 69 GYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
G EN + ++I E G + L QV + L+ I
Sbjct: 106 GVITENPV-WIIMELCTLGELRSFL----QVRKYSLDLASL--ILYAYQLSTALAYLESK 158
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRF 188
R VH+D NVLV + K+ D GL ++ + S + ++A E FRRF
Sbjct: 159 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESINFRRF 217
Query: 189 SEKSDVYSFGVFLLELV 205
+ SDV+ FGV + E++
Sbjct: 218 TSASDVWMFGVCMWEIL 234
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGL-LQDG----MLVAIKK-----RPGAPTQEFIDEVCF 55
L F ++G G FG VYKGL + +G + VAIK+ P A +E +DE
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYV 73
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
+AS+ + ++ LLG C + +Q LI + +P G + + V K + +
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDY------VREHKDNIGSQYLLNWC 126
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
R+VH+D NVLV K+ D GL LG + +
Sbjct: 127 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++A E R ++ +SDV+S+GV + EL++
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 96/201 (47%), Gaps = 16/201 (7%)
Query: 15 NLIGEGKFGEVYKGL-LQDG-------MLVAIKKRPGAPT-QEFIDEVCFLASIQHRNLV 65
++G G FG V+KG+ + +G + I+ + G + Q D + + S+ H ++V
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 66 TLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
LLG C ++LQ L+ +Y+P GS+ H V + + +L +
Sbjct: 79 RLLGLCPGSSLQ-LVTQYLPLGSLLDH------VRQHRGALGPQLLLNWGVQIAKGMYYL 131
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEF 185
+VH++ NVL+ +VAD G+ + L D S+ ++A E F
Sbjct: 132 EEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHF 191
Query: 186 RRFSEKSDVYSFGVFLLELVS 206
+++ +SDV+S+GV + EL++
Sbjct: 192 GKYTHQSDVWSYGVTVWELMT 212
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 16/197 (8%)
Query: 17 IGEGKFGEVYKGLLQD----GMLVAIKKRPGAPT----QEFIDEVCFLASIQHRNLVTLL 68
IGEG+FG+V++G+ M VAIK + ++F+ E + H ++V L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 69 GYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
G EN + ++I E G + L QV + L+ I
Sbjct: 458 GVITENPV-WIIMELCTLGELRSFL----QVRKFSLDLASL--ILYAYQLSTALAYLESK 510
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRF 188
R VH+D NVLV + K+ D GL ++ + S + ++A E FRRF
Sbjct: 511 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESINFRRF 569
Query: 189 SEKSDVYSFGVFLLELV 205
+ SDV+ FGV + E++
Sbjct: 570 TSASDVWMFGVCMWEIL 586
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGL-LQDG----MLVAIKK-----RPGAPTQEFIDEVCF 55
L F ++G G FG VYKGL + +G + VAIK+ P A +E +DE
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYV 72
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
+AS+ + ++ LLG C + +Q LI + +P G + + V K + +
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDY------VREHKDNIGSQYLLNWC 125
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
R+VH+D NVLV K+ D GL LG + +
Sbjct: 126 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 185
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++A E R ++ +SDV+S+GV + EL++
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGL-LQDG----MLVAIKK-----RPGAPTQEFIDEVCF 55
L F ++G G FG VYKGL + +G + VAIK+ P A +E +DE
Sbjct: 16 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYV 74
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
+AS+ + ++ LLG C + +Q LI + +P G + + V K + +
Sbjct: 75 MASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDY------VREHKDNIGSQYLLNWC 127
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
R+VH+D NVLV K+ D GL LG + +
Sbjct: 128 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 187
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++A E R ++ +SDV+S+GV + EL++
Sbjct: 188 KWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 16/197 (8%)
Query: 17 IGEGKFGEVYKGLLQD----GMLVAIKKRPGAPT----QEFIDEVCFLASIQHRNLVTLL 68
IGEG+FG+V++G+ + VAIK + ++F+ E + H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 69 GYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
G EN + ++I E G + L QV + L+ I
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFL----QVRKYSLDLASL--ILYAYQLSTALAYLESK 130
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRF 188
R VH+D NVLV + K+ D GL ++ + S + ++A E FRRF
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESINFRRF 189
Query: 189 SEKSDVYSFGVFLLELV 205
+ SDV+ FGV + E++
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGL-LQDG----MLVAIKK-----RPGAPTQEFIDEVCF 55
L F ++G G FG VYKGL + +G + VAIK+ P A +E +DE
Sbjct: 13 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYV 71
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
+AS+ + ++ LLG C + +Q LI + +P G + + V K + +
Sbjct: 72 MASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDY------VREHKDNIGSQYLLNWC 124
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
R+VH+D NVLV K+ D GL LG + +
Sbjct: 125 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 184
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++A E R ++ +SDV+S+GV + EL++
Sbjct: 185 KWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 96/201 (47%), Gaps = 16/201 (7%)
Query: 15 NLIGEGKFGEVYKGL-LQDG-------MLVAIKKRPGAPT-QEFIDEVCFLASIQHRNLV 65
++G G FG V+KG+ + +G + I+ + G + Q D + + S+ H ++V
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 66 TLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
LLG C ++LQ L+ +Y+P GS+ H V + + +L +
Sbjct: 97 RLLGLCPGSSLQ-LVTQYLPLGSLLDH------VRQHRGALGPQLLLNWGVQIAKGMYYL 149
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEF 185
+VH++ NVL+ +VAD G+ + L D S+ ++A E F
Sbjct: 150 EEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHF 209
Query: 186 RRFSEKSDVYSFGVFLLELVS 206
+++ +SDV+S+GV + EL++
Sbjct: 210 GKYTHQSDVWSYGVTVWELMT 230
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGL-LQDG----MLVAIKK-----RPGAPTQEFIDEVCF 55
L F ++G G FG VYKGL + +G + VAIK+ P A +E +DE
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYV 70
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
+AS+ + ++ LLG C + +Q LI + +P G + + V K + +
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDY------VREHKDNIGSQYLLNWC 123
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
R+VH+D NVLV K+ D GL LG + +
Sbjct: 124 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++A E R ++ +SDV+S+GV + EL++
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 16/197 (8%)
Query: 17 IGEGKFGEVYKGLLQD----GMLVAIKKRPGAPT----QEFIDEVCFLASIQHRNLVTLL 68
IGEG+FG+V++G+ + VAIK + ++F+ E + H ++V L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 69 GYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
G EN + ++I E G + L QV + L+ I
Sbjct: 81 GVITENPV-WIIMELCTLGELRSFL----QVRKYSLDLASL--ILYAYQLSTALAYLESK 133
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRF 188
R VH+D NVLV + K+ D GL ++ + S + ++A E FRRF
Sbjct: 134 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESINFRRF 192
Query: 189 SEKSDVYSFGVFLLELV 205
+ SDV+ FGV + E++
Sbjct: 193 TSASDVWMFGVCMWEIL 209
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 16/197 (8%)
Query: 17 IGEGKFGEVYKGLLQD----GMLVAIKKRPGAPT----QEFIDEVCFLASIQHRNLVTLL 68
IGEG+FG+V++G+ + VAIK + ++F+ E + H ++V L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 69 GYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
G EN + ++I E G + L QV + L+ I
Sbjct: 83 GVITENPV-WIIMELCTLGELRSFL----QVRKYSLDLASL--ILYAYQLSTALAYLESK 135
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRF 188
R VH+D NVLV + K+ D GL ++ + S + ++A E FRRF
Sbjct: 136 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESINFRRF 194
Query: 189 SEKSDVYSFGVFLLELV 205
+ SDV+ FGV + E++
Sbjct: 195 TSASDVWMFGVCMWEIL 211
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 16/197 (8%)
Query: 17 IGEGKFGEVYKGLLQD----GMLVAIKKRPGAPT----QEFIDEVCFLASIQHRNLVTLL 68
IGEG+FG+V++G+ + VAIK + ++F+ E + H ++V L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 69 GYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
G EN + ++I E G + L QV + L+ I
Sbjct: 75 GVITENPV-WIIMELCTLGELRSFL----QVRKYSLDLASL--ILYAYQLSTALAYLESK 127
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRF 188
R VH+D NVLV + K+ D GL ++ + S + ++A E FRRF
Sbjct: 128 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESINFRRF 186
Query: 189 SEKSDVYSFGVFLLELV 205
+ SDV+ FGV + E++
Sbjct: 187 TSASDVWMFGVCMWEIL 203
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGL-LQDG----MLVAIKK-----RPGAPTQEFIDEVCF 55
L F ++G G FG VYKGL + +G + VAIK+ P A +E +DE
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYV 72
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
+AS+ + ++ LLG C + +Q LI + +P G + + V K + +
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDY------VREHKDNIGSQYLLNWC 125
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
R+VH+D NVLV K+ D GL LG + +
Sbjct: 126 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 185
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++A E R ++ +SDV+S+GV + EL++
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 93/217 (42%), Gaps = 27/217 (12%)
Query: 17 IGEGKFGEVYK----GLL--QDGMLVAIK---KRPGAPTQ-EFIDEVCFLASIQHRNLVT 66
IGEG FG V++ GLL + +VA+K + A Q +F E +A + N+V
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 67 LLGYCQENNLQFLIYEYIPNGSV-----SIHLYGPSQVSRQKLEFKHRLS---------- 111
LLG C L++EY+ G + S+ + +S L + R+S
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 112 --IXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSS 169
+ + VH+D T N LV E+ + K+AD GL + D
Sbjct: 175 EQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADG 234
Query: 170 QVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++ E + R++ +SDV+++GV L E+ S
Sbjct: 235 NDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGL-LQDG----MLVAIKK-----RPGAPTQEFIDEVCF 55
L F ++G G FG VYKGL + +G + VAIK+ P A +E +DE
Sbjct: 13 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYV 71
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
+AS+ + ++ LLG C + +Q LI + +P G + + V K + +
Sbjct: 72 MASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDY------VREHKDNIGSQYLLNWC 124
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
R+VH+D NVLV K+ D GL LG + +
Sbjct: 125 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 184
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++A E R ++ +SDV+S+GV + EL++
Sbjct: 185 KWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 16/197 (8%)
Query: 17 IGEGKFGEVYKGLLQD----GMLVAIKKRPGAPT----QEFIDEVCFLASIQHRNLVTLL 68
IGEG+FG+V++G+ + VAIK + ++F+ E + H ++V L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 69 GYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
G EN + ++I E G + L QV + L+ I
Sbjct: 80 GVITENPV-WIIMELCTLGELRSFL----QVRKYSLDLASL--ILYAYQLSTALAYLESK 132
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRF 188
R VH+D NVLV + K+ D GL ++ + S + ++A E FRRF
Sbjct: 133 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESINFRRF 191
Query: 189 SEKSDVYSFGVFLLELV 205
+ SDV+ FGV + E++
Sbjct: 192 TSASDVWMFGVCMWEIL 208
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGL-LQDG----MLVAIKK-----RPGAPTQEFIDEVCF 55
L F ++G G FG VYKGL + +G + VAIK+ P A +E +DE
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYV 73
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
+AS+ + ++ LLG C + +Q LI + +P G + + V K + +
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDY------VREHKDNIGSQYLLNWC 126
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
R+VH+D NVLV K+ D GL LG + +
Sbjct: 127 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++A E R ++ +SDV+S+GV + EL++
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGL-LQDG----MLVAIKK-----RPGAPTQEFIDEVCF 55
L F ++G G FG VYKGL + +G + VAIK+ P A +E +DE
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYV 73
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
+AS+ + ++ LLG C + +Q LI + +P G + + V K + +
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDY------VREHKDNIGSQYLLNWC 126
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
R+VH+D NVLV K+ D GL LG + +
Sbjct: 127 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++A E R ++ +SDV+S+GV + EL++
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGL-LQDG----MLVAIKK-----RPGAPTQEFIDEVCF 55
L F ++G G FG VYKGL + +G + VAIK+ P A +E +DE
Sbjct: 22 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYV 80
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
+AS+ + ++ LLG C + +Q LI + +P G + + V K + +
Sbjct: 81 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDY------VREHKDNIGSQYLLNWC 133
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
R+VH+D NVLV K+ D GL LG + +
Sbjct: 134 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 193
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++A E R ++ +SDV+S+GV + EL++
Sbjct: 194 KWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGL-LQDG----MLVAIKK-----RPGAPTQEFIDEVCF 55
L F ++G G FG VYKGL + +G + VAIK+ P A +E +DE
Sbjct: 19 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYV 77
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
+AS+ + ++ LLG C + +Q LI + +P G + + V K + +
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDY------VREHKDNIGSQYLLNWC 130
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
R+VH+D NVLV K+ D GL LG + +
Sbjct: 131 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 190
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++A E R ++ +SDV+S+GV + EL++
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGL-LQDG----MLVAIKK-----RPGAPTQEFIDEVCF 55
L F ++G G FG VYKGL + +G + VAIK+ P A +E +DE
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYV 70
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
+AS+ + ++ LLG C + +Q LI + +P G + V K + +
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL------DYVREHKDNIGSQYLLNWC 123
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
R+VH+D NVLV K+ D GL LG + +
Sbjct: 124 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++A E R ++ +SDV+S+GV + EL++
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGL-LQDG----MLVAIKK-----RPGAPTQEFIDEVCF 55
L F ++G G FG VYKGL + +G + VAIK+ P A +E +DE
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYV 70
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
+AS+ + ++ LLG C + +Q LI + +P G + + V K + +
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDY------VREHKDNIGSQYLLNWC 123
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
R+VH+D NVLV K+ D GL LG + +
Sbjct: 124 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++A E R ++ +SDV+S+GV + EL++
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGL-LQDG----MLVAIKK-----RPGAPTQEFIDEVCF 55
L F ++G G FG VYKGL + +G + VAIK+ P A +E +DE
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYV 73
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
+AS+ + ++ LLG C + +Q LI + +P G + + V K + +
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDY------VREHKDNIGSQYLLNWC 126
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
R+VH+D NVLV K+ D GL LG + +
Sbjct: 127 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++A E R ++ +SDV+S+GV + EL++
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGL-LQDG----MLVAIKK-----RPGAPTQEFIDEVCF 55
L F ++G G FG VYKGL + +G + VAIK+ P A +E +DE
Sbjct: 9 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYV 67
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
+AS+ + ++ LLG C + +Q LI + +P G + V K + +
Sbjct: 68 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL------DYVREHKDNIGSQYLLNWC 120
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
R+VH+D NVLV K+ D GL LG + +
Sbjct: 121 VQIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 180
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++A E R ++ +SDV+S+GV + EL++
Sbjct: 181 KWMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGL-LQDG----MLVAIKK-----RPGAPTQEFIDEVCF 55
L F ++G G FG VYKGL + +G + VAIK+ P A +E +DE
Sbjct: 6 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYV 64
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
+AS+ + ++ LLG C + +Q LI + +P G + V K + +
Sbjct: 65 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLL------DYVREHKDNIGSQYLLNWC 117
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
R+VH+D NVLV K+ D GL LG + +
Sbjct: 118 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 177
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++A E R ++ +SDV+S+GV + EL++
Sbjct: 178 KWMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 124/300 (41%), Gaps = 54/300 (18%)
Query: 5 SLATKNFSDKNLIGEGKFGEVYKG-LLQDGMLVAIKKRPGAPT----------QEFIDEV 53
+LA + IG+G FG V+KG L++D +VAIK + QEF EV
Sbjct: 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREV 74
Query: 54 CFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIX 113
++++ H N+V L G +N ++ E++P G + L + + ++ + L I
Sbjct: 75 FIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIA 132
Query: 114 XXXXXXXXXXXXXXPRVVHKDFKTANVLV---DED--FIAKVADAG--------LRNFLG 160
P +VH+D ++ N+ + DE+ AKVAD G + LG
Sbjct: 133 LGIEYMQNQN----PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLG 188
Query: 161 RTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXX 220
P + + A+E ++EK+D YSF + L +++G
Sbjct: 189 NFQWMAPET-IGAEE----------ESYTEKADTYSFAMILYTILTGEGPFD-------- 229
Query: 221 XXVELVQNSRDFSNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTEL 280
E F N+++ +E L T + +I C ++RP S +V EL
Sbjct: 230 ---EYSYGKIKFINMIR--EEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGL-LQDG----MLVAIKK-----RPGAPTQEFIDEVCF 55
L F ++G G FG VYKGL + +G + VAIK+ P A +E +DE
Sbjct: 37 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYV 95
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
+AS+ + ++ LLG C + +Q LI + +P G + + V K + +
Sbjct: 96 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDY------VREHKDNIGSQYLLNWC 148
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
R+VH+D NVLV K+ D GL LG + +
Sbjct: 149 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 208
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++A E R ++ +SDV+S+GV + EL++
Sbjct: 209 KWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGL-LQDG----MLVAIKK-----RPGAPTQEFIDEVCF 55
L F ++G G FG VYKGL + +G + VAIK+ P A +E +DE
Sbjct: 18 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYV 76
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
+AS+ + ++ LLG C + +Q LI + +P G + + V K + +
Sbjct: 77 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDY------VREHKDNIGSQYLLNWC 129
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
R+VH+D NVLV K+ D GL LG + +
Sbjct: 130 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 189
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++A E R ++ +SDV+S+GV + EL++
Sbjct: 190 KWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 111/282 (39%), Gaps = 43/282 (15%)
Query: 7 ATKNFSDKNLIGEGKFGEVY-------KGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
A ++F +G+GKFG VY K +L +L + + EV + +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXX 118
+H N++ L GY + +LI EY P G+V L QKL +F + +
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--------QKLSKFDEQRTATYITEL 116
Query: 119 XXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT---ADE 175
RV+H+D K N+L+ K+AD G V PSS+ T
Sbjct: 117 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRTTLCGTL 169
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNL 235
+L E+ E R EK D++S GV E + G+ + V+ +
Sbjct: 170 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 223
Query: 236 LKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
+ F EG + LI R L + +RP + +V+
Sbjct: 224 --------FPDFVTEGARD---LISRLLKHNPSQRPMLREVL 254
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 87/197 (44%), Gaps = 16/197 (8%)
Query: 17 IGEGKFGEVYKGLLQD----GMLVAIKKRPGAPT----QEFIDEVCFLASIQHRNLVTLL 68
IGEG+FG+V++G+ M VAIK + ++F+ E + H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 69 GYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
G EN + ++I E G + L QV + L+ I
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFL----QVRKFSLDLASL--ILYAYQLSTALAYLESK 130
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRF 188
R VH+D NVLV K+ D GL ++ + S + ++A E FRRF
Sbjct: 131 RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESINFRRF 189
Query: 189 SEKSDVYSFGVFLLELV 205
+ SDV+ FGV + E++
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGL-LQDG----MLVAIKK-----RPGAPTQEFIDEVCF 55
L F ++G G FG VYKGL + +G + VAIK+ P A +E +DE
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYV 70
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
+AS+ + ++ LLG C + +Q LI + +P G + + V K + +
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDY------VREHKDNIGSQYLLNWC 123
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
R+VH+D NVLV K+ D GL LG + +
Sbjct: 124 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++A E R ++ +SDV+S+GV + EL++
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 111/282 (39%), Gaps = 43/282 (15%)
Query: 7 ATKNFSDKNLIGEGKFGEVY-------KGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
A ++F +G+GKFG VY K +L +L + + EV + +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXX 118
+H N++ L GY + +LI EY P G+V L QKL +F + +
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--------QKLSKFDEQRTATYITEL 121
Query: 119 XXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT---ADE 175
RV+H+D K N+L+ K+AD G V PSS+ T
Sbjct: 122 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRTTLCGTL 174
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNL 235
+L E+ E R EK D++S GV E + G+ + V+ +
Sbjct: 175 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 228
Query: 236 LKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
+ F EG + LI R L + +RP + +V+
Sbjct: 229 --------FPDFVTEGARD---LISRLLKHNPSQRPMLREVL 259
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 111/274 (40%), Gaps = 31/274 (11%)
Query: 9 KNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKK-RPGAPTQEFIDEVCFLASIQHRNLVTL 67
K + ++G G FG V K + VAIK+ + + FI E+ L+ + H N+V L
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKL 67
Query: 68 LGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXX 127
G C N L+ EY GS+ L+G + H +S
Sbjct: 68 YGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTA--AHAMSWCLQCSQGVAYLHSMQ 123
Query: 128 PR-VVHKDFKTANVL-VDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEF 185
P+ ++H+D K N+L V + K+ D G D+ + ++A EV E
Sbjct: 124 PKALIHRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAPEVFEG 178
Query: 186 RRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRD--FSNLLKILDERL 243
+SEK DV+S+G+ L E+++ R+ + +R NL K ++
Sbjct: 179 SNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIE--- 235
Query: 244 WSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
L+ RC +RPSM ++V
Sbjct: 236 -------------SLMTRCWSKDPSQRPSMEEIV 256
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 111/282 (39%), Gaps = 43/282 (15%)
Query: 7 ATKNFSDKNLIGEGKFGEVY-------KGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
A ++F +G+GKFG VY K +L +L + + EV + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXX 118
+H N++ L GY + +LI EY P G+V L QKL +F + +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--------QKLSKFDEQRTATYITEL 117
Query: 119 XXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT---ADE 175
RV+H+D K N+L+ K+AD G V PSS+ T
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRTXLCGTL 170
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNL 235
+L E+ E R EK D++S GV E + G+ + V+ +
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 224
Query: 236 LKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
+ F EG + LI R L + +RP + +V+
Sbjct: 225 --------FPDFVTEGARD---LISRLLKHNPSQRPMLREVL 255
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 109/282 (38%), Gaps = 43/282 (15%)
Query: 7 ATKNFSDKNLIGEGKFGEVY-------KGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
A ++F +G+GKFG VY K +L +L + + EV + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXX 118
+H N++ L GY + +LI EY P G V L QKL +F + +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL--------QKLSKFDEQRTATYITEL 122
Query: 119 XXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT---ADE 175
RV+H+D K N+L+ K+AD G V PSS+ T
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRTTLCGTL 175
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNL 235
+L E+ E R EK D++S GV E + G+ + V
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--------- 226
Query: 236 LKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
E + F EG + LI R L + +RP + +V+
Sbjct: 227 -----EFTFPDFVTEGARD---LISRLLKHNPSQRPMLREVL 260
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 111/282 (39%), Gaps = 43/282 (15%)
Query: 7 ATKNFSDKNLIGEGKFGEVY-------KGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
A ++F +G+GKFG VY K +L +L + + EV + +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXX 118
+H N++ L GY + +LI EY P G+V L QKL +F + +
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--------QKLSKFDEQRTATYITEL 114
Query: 119 XXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT---ADE 175
RV+H+D K N+L+ K+AD G V PSS+ T
Sbjct: 115 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRTTLCGTL 167
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNL 235
+L E+ E R EK D++S GV E + G+ + V+ +
Sbjct: 168 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 221
Query: 236 LKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
+ F EG + LI R L + +RP + +V+
Sbjct: 222 --------FPDFVTEGARD---LISRLLKHNPSQRPMLREVL 252
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 95/213 (44%), Gaps = 18/213 (8%)
Query: 3 ELSLATKNFSDKNLIGEGKFGEVYKGLLQD----GMLVAIKKRPGAPT----QEFIDEVC 54
+ +A ++ ++GEG FGEVY+G+ + + VA+K T ++F+ E
Sbjct: 6 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV 65
Query: 55 FLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXX 114
+ ++ H ++V L+G +E ++I E P G + +L R K K +
Sbjct: 66 IMKNLDHPHIVKLIGIIEEEP-TWIIMELYPYGELGHYL------ERNKNSLKVLTLVLY 118
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTAD 174
VH+D N+LV K+ D GL ++ D S VT
Sbjct: 119 SLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKAS--VTRL 176
Query: 175 EI-FLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
I +++ E FRRF+ SDV+ F V + E++S
Sbjct: 177 PIKWMSPESINFRRFTTASDVWMFAVCMWEILS 209
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 111/274 (40%), Gaps = 31/274 (11%)
Query: 9 KNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKK-RPGAPTQEFIDEVCFLASIQHRNLVTL 67
K + ++G G FG V K + VAIK+ + + FI E+ L+ + H N+V L
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKL 66
Query: 68 LGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXX 127
G C N L+ EY GS+ L+G + H +S
Sbjct: 67 YGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTA--AHAMSWCLQCSQGVAYLHSMQ 122
Query: 128 PR-VVHKDFKTANVL-VDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEF 185
P+ ++H+D K N+L V + K+ D G D+ + ++A EV E
Sbjct: 123 PKALIHRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAPEVFEG 177
Query: 186 RRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRD--FSNLLKILDERL 243
+SEK DV+S+G+ L E+++ R+ + +R NL K ++
Sbjct: 178 SNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIE--- 234
Query: 244 WSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
L+ RC +RPSM ++V
Sbjct: 235 -------------SLMTRCWSKDPSQRPSMEEIV 255
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 111/282 (39%), Gaps = 43/282 (15%)
Query: 7 ATKNFSDKNLIGEGKFGEVY-------KGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
A ++F +G+GKFG VY K +L +L + + EV + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXX 118
+H N++ L GY + +LI EY P G+V L QKL +F + +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--------QKLSKFDEQRTATYITEL 120
Query: 119 XXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT---ADE 175
RV+H+D K N+L+ K+AD G V PSS+ T
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRTTLCGTL 173
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNL 235
+L E+ E R EK D++S GV E + G+ + V+ +
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 227
Query: 236 LKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
+ F EG + LI R L + +RP + +V+
Sbjct: 228 --------FPDFVTEGARD---LISRLLKHNPSQRPMLREVL 258
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 95/213 (44%), Gaps = 18/213 (8%)
Query: 3 ELSLATKNFSDKNLIGEGKFGEVYKGLLQD----GMLVAIKKRPGAPT----QEFIDEVC 54
+ +A ++ ++GEG FGEVY+G+ + + VA+K T ++F+ E
Sbjct: 2 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV 61
Query: 55 FLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXX 114
+ ++ H ++V L+G +E ++I E P G + +L R K K +
Sbjct: 62 IMKNLDHPHIVKLIGIIEEEP-TWIIMELYPYGELGHYL------ERNKNSLKVLTLVLY 114
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTAD 174
VH+D N+LV K+ D GL ++ D S VT
Sbjct: 115 SLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKAS--VTRL 172
Query: 175 EI-FLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
I +++ E FRRF+ SDV+ F V + E++S
Sbjct: 173 PIKWMSPESINFRRFTTASDVWMFAVCMWEILS 205
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 95/213 (44%), Gaps = 18/213 (8%)
Query: 3 ELSLATKNFSDKNLIGEGKFGEVYKGLLQD----GMLVAIKKRPGAPT----QEFIDEVC 54
+ +A ++ ++GEG FGEVY+G+ + + VA+K T ++F+ E
Sbjct: 18 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV 77
Query: 55 FLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXX 114
+ ++ H ++V L+G +E ++I E P G + +L R K K +
Sbjct: 78 IMKNLDHPHIVKLIGIIEEEP-TWIIMELYPYGELGHYL------ERNKNSLKVLTLVLY 130
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTAD 174
VH+D N+LV K+ D GL ++ D S VT
Sbjct: 131 SLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKAS--VTRL 188
Query: 175 EI-FLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
I +++ E FRRF+ SDV+ F V + E++S
Sbjct: 189 PIKWMSPESINFRRFTTASDVWMFAVCMWEILS 221
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 110/282 (39%), Gaps = 43/282 (15%)
Query: 7 ATKNFSDKNLIGEGKFGEVY-------KGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
A ++F +G+GKFG VY K +L +L + + EV + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXX 118
+H N++ L GY + +LI EY P G+V L QKL +F + +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--------QKLSKFDEQRTATYITEL 122
Query: 119 XXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT---ADE 175
RV+H+D K N+L+ K+AD G V PSS+ T
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRTTLCGTL 175
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNL 235
+L E+ E R EK D++S GV E + G+ + V
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--------- 226
Query: 236 LKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
E + F EG + LI R L + +RP + +V+
Sbjct: 227 -----EFTFPDFVTEGARD---LISRLLKHNPSQRPMLREVL 260
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 110/282 (39%), Gaps = 43/282 (15%)
Query: 7 ATKNFSDKNLIGEGKFGEVY-------KGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
A ++F +G+GKFG VY K +L +L + + EV + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXX 118
+H N++ L GY + +LI EY P G+V L QKL +F + +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--------QKLSKFDEQRTATYITEL 122
Query: 119 XXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT---ADE 175
RV+H+D K N+L+ K+AD G V PSS+ T
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRTDLCGTL 175
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNL 235
+L E+ E R EK D++S GV E + G+ + V
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--------- 226
Query: 236 LKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
E + F EG + LI R L + +RP + +V+
Sbjct: 227 -----EFTFPDFVTEGARD---LISRLLKHNPSQRPMLREVL 260
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 126/294 (42%), Gaps = 42/294 (14%)
Query: 5 SLATKNFSDKNLIGEGKFGEVYKG-LLQDGMLVAIKKRPGAPT----------QEFIDEV 53
+LA + IG+G FG V+KG L++D +VAIK + QEF EV
Sbjct: 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREV 74
Query: 54 CFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIX 113
++++ H N+V L G +N ++ E++P G + L + + ++ + L I
Sbjct: 75 FIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIA 132
Query: 114 XXXXXXXXXXXXXXPRVVHKDFKTANVLV---DED--FIAKVADAGL--RNFLGRTDVAG 166
P +VH+D ++ N+ + DE+ AKVAD L ++ + + G
Sbjct: 133 LGIEYMQNQN----PPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLG 188
Query: 167 PSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELV 226
+ Q A E A E ++EK+D YSF + L +++G E
Sbjct: 189 -NFQWMAPETIGAEE----ESYTEKADTYSFAMILYTILTGEGPFD-----------EYS 232
Query: 227 QNSRDFSNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTEL 280
F N+++ +E L T + +I C ++RP S +V EL
Sbjct: 233 YGKIKFINMIR--EEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 111/282 (39%), Gaps = 43/282 (15%)
Query: 7 ATKNFSDKNLIGEGKFGEVY-------KGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
A ++F +G+GKFG VY K +L +L + + EV + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXX 118
+H N++ L GY + +LI EY P G+V L QKL +F + +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--------QKLSKFDEQRTATYITEL 117
Query: 119 XXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT---ADE 175
RV+H+D K N+L+ K+AD G V PSS+ T
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRTDLCGTL 170
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNL 235
+L E+ E R EK D++S GV E + G+ + V+ +
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 224
Query: 236 LKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
+ F EG + LI R L + +RP + +V+
Sbjct: 225 --------FPDFVTEGARD---LISRLLKHNPSQRPMLREVL 255
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 111/282 (39%), Gaps = 43/282 (15%)
Query: 7 ATKNFSDKNLIGEGKFGEVY-------KGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
A ++F +G+GKFG VY K +L +L + + EV + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXX 118
+H N++ L GY + +LI EY P G+V L QKL +F + +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--------QKLSKFDEQRTATYITEL 117
Query: 119 XXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTA---DE 175
RV+H+D K N+L+ K+AD G V PSS+ A
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRAALCGTL 170
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNL 235
+L E+ E R EK D++S GV E + G+ + V+ +
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 224
Query: 236 LKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
+ F EG + LI R L + +RP + +V+
Sbjct: 225 --------FPDFVTEGARD---LISRLLKHNPSQRPMLREVL 255
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 110/282 (39%), Gaps = 43/282 (15%)
Query: 7 ATKNFSDKNLIGEGKFGEVY-------KGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
A ++F +G+GKFG VY K +L +L + + EV + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXX 118
+H N++ L GY + +LI EY P G+V L QKL +F + +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--------QKLSKFDEQRTATYITEL 117
Query: 119 XXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT---ADE 175
RV+H+D K N+L+ K+AD G V PSS+ T
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRTTLCGTL 170
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNL 235
+L E+ E R EK D++S GV E + G+ + V
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--------- 221
Query: 236 LKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
E + F EG + LI R L + +RP + +V+
Sbjct: 222 -----EFTFPDFVTEGARD---LISRLLKHNPSQRPMLREVL 255
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 111/282 (39%), Gaps = 43/282 (15%)
Query: 7 ATKNFSDKNLIGEGKFGEVY-------KGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
A ++F +G+GKFG VY K +L +L + + EV + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXX 118
+H N++ L GY + +LI EY P G+V L QKL +F + +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--------QKLSKFDEQRTATYITEL 117
Query: 119 XXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT---ADE 175
RV+H+D K N+L+ K+AD G V PSS+ T
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRTDLCGTL 170
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNL 235
+L E+ E R EK D++S GV E + G+ + V+ +
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 224
Query: 236 LKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
+ F EG + LI R L + +RP + +V+
Sbjct: 225 --------FPDFVTEGARD---LISRLLKHNPSQRPMLREVL 255
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 111/282 (39%), Gaps = 43/282 (15%)
Query: 7 ATKNFSDKNLIGEGKFGEVY-------KGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
A ++F +G+GKFG VY K +L +L + + EV + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXX 118
+H N++ L GY + +LI EY P G+V L QKL +F + +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--------QKLSKFDEQRTATYITEL 118
Query: 119 XXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT---ADE 175
RV+H+D K N+L+ K+AD G V PSS+ T
Sbjct: 119 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRTDLCGTL 171
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNL 235
+L E+ E R EK D++S GV E + G+ + V+ +
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 225
Query: 236 LKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
+ F EG + LI R L + +RP + +V+
Sbjct: 226 --------FPDFVTEGARD---LISRLLKHNPSQRPMLREVL 256
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 110/282 (39%), Gaps = 43/282 (15%)
Query: 7 ATKNFSDKNLIGEGKFGEVY-------KGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
A ++F +G+GKFG VY K +L +L + + EV + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXX 118
+H N++ L GY + +LI EY P G+V L QKL +F + +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--------QKLSKFDEQRTATYITEL 120
Query: 119 XXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT---ADE 175
RV+H+D K N+L+ K+AD G V PSS+ T
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRTTLCGTL 173
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNL 235
+L E+ E R EK D++S GV E + G+ + V
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--------- 224
Query: 236 LKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
E + F EG + LI R L + +RP + +V+
Sbjct: 225 -----EFTFPDFVTEGARD---LISRLLKHNPSQRPMLREVL 258
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 110/282 (39%), Gaps = 43/282 (15%)
Query: 7 ATKNFSDKNLIGEGKFGEVY-------KGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
A ++F +G+GKFG VY K +L +L + + EV + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXX 118
+H N++ L GY + +LI EY P G+V L QKL +F + +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--------QKLSKFDEQRTATYITEL 117
Query: 119 XXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT---ADE 175
RV+H+D K N+L+ K+AD G V PSS+ T
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRTELCGTL 170
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNL 235
+L E+ E R EK D++S GV E + G+ + V
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--------- 221
Query: 236 LKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
E + F EG + LI R L + +RP + +V+
Sbjct: 222 -----EFTFPDFVTEGARD---LISRLLKHNPSQRPMLREVL 255
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 111/282 (39%), Gaps = 43/282 (15%)
Query: 7 ATKNFSDKNLIGEGKFGEVY-------KGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
A ++F +G+GKFG VY K +L +L + + EV + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXX 118
+H N++ L GY + +LI EY P G+V L QKL +F + +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--------QKLSKFDEQRTATYITEL 117
Query: 119 XXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQ---VTADE 175
RV+H+D K N+L+ K+AD G V PSS+ +
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRXXLCGTL 170
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNL 235
+L E+ E R EK D++S GV E + G+ + V+ +
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 224
Query: 236 LKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
+ F EG + LI R L + +RP + +V+
Sbjct: 225 --------FPDFVTEGARD---LISRLLKHNPSQRPMLREVL 255
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 109/282 (38%), Gaps = 43/282 (15%)
Query: 7 ATKNFSDKNLIGEGKFGEVY-------KGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
A ++F +G+GKFG VY K +L +L + + EV + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXX 118
+H N++ L GY + +LI EY P G V L QKL +F + +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL--------QKLSKFDEQRTATYITEL 122
Query: 119 XXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQ---VTADE 175
RV+H+D K N+L+ K+AD G V PSS+ +
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRXXLXGTL 175
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNL 235
+L E+ E R EK D++S GV E + G+ + V
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--------- 226
Query: 236 LKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
E + F EG + LI R L + +RP + +V+
Sbjct: 227 -----EFTFPDFVTEGARD---LISRLLKHNPSQRPMLREVL 260
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 111/282 (39%), Gaps = 43/282 (15%)
Query: 7 ATKNFSDKNLIGEGKFGEVY-------KGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
A ++F +G+GKFG VY K +L +L + + EV + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXX 118
+H N++ L GY + +LI EY P G+V L QKL +F + +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--------QKLSKFDEQRTATYITEL 120
Query: 119 XXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQ---VTADE 175
RV+H+D K N+L+ K+AD G V PSS+ +
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRDDLCGTL 173
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNL 235
+L E+ E R EK D++S GV E + G+ + V+ +
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 227
Query: 236 LKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
+ F EG + LI R L + +RP + +V+
Sbjct: 228 --------FPDFVTEGARD---LISRLLKHNPSQRPMLREVL 258
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 111/288 (38%), Gaps = 43/288 (14%)
Query: 1 MEELSLATKNFSDKNLIGEGKFGEVY-------KGLLQDGMLVAIKKRPGAPTQEFIDEV 53
M A ++F +G+GKFG VY K +L +L + + EV
Sbjct: 3 MGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 54 CFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSI 112
+ ++H N++ L GY + +LI EY P G+V L QKL +F + +
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--------QKLSKFDEQRTA 114
Query: 113 XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT 172
RV+H+D K N+L+ K+AD G V PSS+
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRA 167
Query: 173 A---DEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNS 229
A +L E+ E R EK D++S GV E + G+ + V
Sbjct: 168 ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--- 224
Query: 230 RDFSNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
E + F EG + LI R L + +RP + +V+
Sbjct: 225 -----------EFTFPDFVTEGARD---LISRLLKHNPSQRPMLREVL 258
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 87/197 (44%), Gaps = 16/197 (8%)
Query: 17 IGEGKFGEVYKGLLQD----GMLVAIKKRPGAPT----QEFIDEVCFLASIQHRNLVTLL 68
IGEG+FG+V++G+ M VAIK + ++F+ E + H ++V L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 69 GYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
G EN + ++I E G + L QV + L+ I
Sbjct: 458 GVITENPV-WIIMELCTLGELRSFL----QVRKFSLDLASL--ILYAYQLSTALAYLESK 510
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRF 188
R VH+D NVLV K+ D GL ++ + S + ++A E FRRF
Sbjct: 511 RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESINFRRF 569
Query: 189 SEKSDVYSFGVFLLELV 205
+ SDV+ FGV + E++
Sbjct: 570 TSASDVWMFGVCMWEIL 586
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 113/281 (40%), Gaps = 42/281 (14%)
Query: 16 LIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQEFID-------EVCFLASIQHRNLVTLL 68
+IG G FG+VY+ G VA+K P ++ E A ++H N++ L
Sbjct: 14 IIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 69 GYC-QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXX 127
G C +E NL L+ E+ G ++ L G R + ++
Sbjct: 73 GVCLKEPNL-CLVMEFARGGPLNRVLSG----KRIPPDILVNWAVQIARGMNYLHDEAIV 127
Query: 128 PRVVHKDFKTANVLVDEDF--------IAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
P ++H+D K++N+L+ + I K+ D GL RT + ++A
Sbjct: 128 P-IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYA----WMA 182
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKIL 239
EV FS+ SDV+S+GV L EL++G V +
Sbjct: 183 PEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAM-------------- 228
Query: 240 DERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTEL 280
+L + E F +L+ C +P RPS ++++ +L
Sbjct: 229 -NKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQL 268
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 111/282 (39%), Gaps = 43/282 (15%)
Query: 7 ATKNFSDKNLIGEGKFGEVY-------KGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
A ++F +G+GKFG VY K +L +L + + EV + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXX 118
+H N++ L GY + +LI EY P G+V L QKL +F + +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--------QKLSKFDEQRTATYITEL 120
Query: 119 XXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQ---VTADE 175
RV+H+D K N+L+ K+AD G V PSS+ +
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRXXLCGTL 173
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNL 235
+L E+ E R EK D++S GV E + G+ + V+ +
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 227
Query: 236 LKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
+ F EG + LI R L + +RP + +V+
Sbjct: 228 --------FPDFVTEGARD---LISRLLKHNPSQRPMLREVL 258
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 109/282 (38%), Gaps = 43/282 (15%)
Query: 7 ATKNFSDKNLIGEGKFGEVY-------KGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
A ++F +G+GKFG VY K +L +L + + EV + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXX 118
+H N++ L GY + +LI EY P G+V L QKL +F + +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--------QKLSKFDEQRTATYITEL 122
Query: 119 XXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT---ADE 175
RV+H+D K N+L+ K+AD G V PSS+ T
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRTTLCGTL 175
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNL 235
+L E E R EK D++S GV E + G+ + V
Sbjct: 176 DYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--------- 226
Query: 236 LKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
E + F EG + LI R L + +RP + +V+
Sbjct: 227 -----EFTFPDFVTEGARD---LISRLLKHNPSQRPXLREVL 260
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 25/204 (12%)
Query: 16 LIGE-GKFGEVYKGLLQDGMLVAIKKRPGAPTQE----FIDEVCFLASIQHRNLVTLL-G 69
+IGE G FG+VYK ++ ++A K ++E ++ E+ LAS H N+V LL
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 70 YCQENNLQFLIYEYIPNGSVS---IHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXX 126
+ ENNL LI E+ G+V + L P S+ ++ K L
Sbjct: 76 FYYENNLWILI-EFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN------- 127
Query: 127 XPRVVHKDFKTANVLVDEDFIAKVADAGL-----RNFLGRTDVAGPSSQVTADEIFLASE 181
+++H+D K N+L D K+AD G+ R + R D + A E+ +
Sbjct: 128 --KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCET 185
Query: 182 VKEFRRFSEKSDVYSFGVFLLELV 205
K+ R + K+DV+S G+ L+E+
Sbjct: 186 SKD-RPYDYKADVWSLGITLIEMA 208
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 90/213 (42%), Gaps = 26/213 (12%)
Query: 7 ATKNFSDKNLIGEGKFGEVY-------KGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
A ++F +G+GKFG VY K +L +L + + EV + +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXX 118
+H N++ L GY + +LI EY P G+V L QKL +F + +
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--------QKLSKFDEQRTATYITEL 134
Query: 119 XXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT---ADE 175
RV+H+D K N+L+ K+AD G V PSS+ T
Sbjct: 135 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRTTLCGTL 187
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
+L E+ E R EK D++S GV E + G+
Sbjct: 188 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 87/209 (41%), Gaps = 24/209 (11%)
Query: 9 KNFSDKNLIGEGKFGEVY-------KGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASIQH 61
++F +G+GKFG VY K +L +L + + EV + ++H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 62 RNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXX 121
N++ L GY + +LI EY P G+V L S+ Q+ +
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQR-------TATYITELANA 124
Query: 122 XXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT---ADEIFL 178
RV+H+D K N+L+ + K+AD G V PSS+ T +L
Sbjct: 125 LSYCHSKRVIHRDIKPENLLLGSNGELKIADFGW-------SVHAPSSRRTTLCGTLDYL 177
Query: 179 ASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
E+ E R EK D++S GV E + G
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 111/282 (39%), Gaps = 43/282 (15%)
Query: 7 ATKNFSDKNLIGEGKFGEVY-------KGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
A ++F +G+GKFG VY K +L +L + + EV + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXX 118
+H N++ L GY + +LI EY P G+V L QKL +F + +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--------QKLSKFDEQRTATYITEL 118
Query: 119 XXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQ---VTADE 175
RV+H+D K N+L+ K+AD G V PSS+ +
Sbjct: 119 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRDTLCGTL 171
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNL 235
+L E+ E R EK D++S GV E + G+ + V+ +
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 225
Query: 236 LKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
+ F EG + LI R L + +RP + +V+
Sbjct: 226 --------FPDFVTEGARD---LISRLLKHNPSQRPMLREVL 256
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 90/213 (42%), Gaps = 26/213 (12%)
Query: 7 ATKNFSDKNLIGEGKFGEVY-------KGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
A ++F +G+GKFG VY K +L +L + + EV + +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXX 118
+H N++ L GY + +LI EY P G+V L QKL +F + +
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--------QKLSKFDEQRTATYITEL 143
Query: 119 XXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT---ADE 175
RV+H+D K N+L+ K+AD G V PSS+ T
Sbjct: 144 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRTTLCGTL 196
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
+L E+ E R EK D++S GV E + G+
Sbjct: 197 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 16/210 (7%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGL-LQDGMLVAIK------KRPGAP--TQEFIDEVCFL 56
L F ++G G FG VYKGL + +G V I + +P +E +DE +
Sbjct: 46 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVM 105
Query: 57 ASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXX 116
AS+ + ++ LLG C + +Q LI + +P G + + V K + +
Sbjct: 106 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDY------VREHKDNIGSQYLLNWCV 158
Query: 117 XXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI 176
R+VH+D NVLV K+ D GL LG + +
Sbjct: 159 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 218
Query: 177 FLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++A E R ++ +SDV+S+GV + EL++
Sbjct: 219 WMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 110/282 (39%), Gaps = 43/282 (15%)
Query: 7 ATKNFSDKNLIGEGKFGEVY-------KGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
A ++F +G+GKFG VY K +L +L + + EV + +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXX 118
+H N++ L GY + +LI EY P G+V L QKL +F + +
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--------QKLSKFDEQRTATYITEL 119
Query: 119 XXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQ---VTADE 175
RV+H+D K N+L+ K+AD G V PSS+ +
Sbjct: 120 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRXXLCGTL 172
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNL 235
+L E+ E R EK D++S GV E + G+ + V
Sbjct: 173 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--------- 223
Query: 236 LKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
E + F EG + LI R L + +RP + +V+
Sbjct: 224 -----EFTFPDFVTEGARD---LISRLLKHNPSQRPMLREVL 257
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 114/284 (40%), Gaps = 38/284 (13%)
Query: 14 KNLIGEGKFGEVYKGLLQ----DGMLVAIKKRPGAPTQ----EFIDEVCFLASIQHRNLV 65
+ +IG G+FGEV G L+ + VAIK T+ +F+ E + H N+V
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 66 TLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
L G ++ E++ NG++ L + +F +
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFL------RKHDGQFTVIQLVGMLRGIAAGMRYL 161
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI---FLASEV 182
VH+D N+LV+ + + KV+D GL + D T +I + A E
Sbjct: 162 ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVI--EDDPEAVYTTTGGKIPVRWTAPEA 219
Query: 183 KEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSN--LLKILD 240
++R+F+ SDV+S+G+ + E++S E + D SN ++K ++
Sbjct: 220 IQYRKFTSASDVWSYGIVMWEVMSYGE-----------------RPYWDMSNQDVIKAIE 262
Query: 241 ERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
E + QL++ C RP +V LD+ +
Sbjct: 263 EGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILDKMI 306
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 112/282 (39%), Gaps = 43/282 (15%)
Query: 7 ATKNFSDKNLIGEGKFGEVY-------KGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
A ++F +G+GKFG VY K +L +L + + EV + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXX 118
+H N++ L GY ++ +LI EY P G+V L QKL +F + +
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL--------QKLSKFDEQRTATYITEL 117
Query: 119 XXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTA---DE 175
+V+H+D K N+L+ K+AD G V PSS+ A
Sbjct: 118 ANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRAALCGTL 170
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNL 235
+L E+ E R EK D++S GV E + G+ + V+ +
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFT------ 224
Query: 236 LKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
+ F EG + LI R L + +RP + +V+
Sbjct: 225 --------FPDFVTEGARD---LISRLLKHNPSQRPMLREVL 255
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 23/201 (11%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQE----FIDEVCFLASIQHRNLVTLL-GYC 71
+G+G FG+VYK ++ ++A K ++E ++ E+ LAS H N+V LL +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 72 QENNLQFLIYEYIPNGSVS---IHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
ENNL LI E+ G+V + L P S+ ++ K L
Sbjct: 105 YENNLWILI-EFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN--------- 154
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLR----NFLGRTDVAGPSSQVTADEIFLASEVKE 184
+++H+D K N+L D K+AD G+ + R D + A E+ + K+
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKD 214
Query: 185 FRRFSEKSDVYSFGVFLLELV 205
R + K+DV+S G+ L+E+
Sbjct: 215 -RPYDYKADVWSLGITLIEMA 234
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 87/209 (41%), Gaps = 24/209 (11%)
Query: 9 KNFSDKNLIGEGKFGEVY-------KGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASIQH 61
++F +G+GKFG VY K +L +L + + EV + ++H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 62 RNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXX 121
N++ L GY + +LI EY P G+V L S+ Q+ +
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQR-------TATYITELANA 124
Query: 122 XXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQ---VTADEIFL 178
RV+H+D K N+L+ + K+AD G V PSS+ + +L
Sbjct: 125 LSYCHSKRVIHRDIKPENLLLGSNGELKIADFGW-------SVHAPSSRRDTLCGTLDYL 177
Query: 179 ASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
E+ E R EK D++S GV E + G
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGL-LQDG----MLVAIKK-----RPGAPTQEFIDEVCF 55
L F ++G G FG VYKGL + +G + VAIK+ P A +E +DE
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYV 72
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
+AS+ + ++ LLG C + +Q LI + +P G + + V K + +
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDY------VREHKDNIGSQYLLNWC 125
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
R+VH+D NVLV K+ D G LG + +
Sbjct: 126 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 185
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++A E R ++ +SDV+S+GV + EL++
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 111/282 (39%), Gaps = 43/282 (15%)
Query: 7 ATKNFSDKNLIGEGKFGEVY-------KGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
A ++F +G+GKFG VY K +L +L + + EV + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXX 118
+H N++ L GY + +LI EY P G+V L QKL +F + +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--------QKLSKFDEQRTATYITEL 120
Query: 119 XXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT---ADE 175
RV+H+D K N+L+ K+A+ G V PSS+ T
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGW-------SVHAPSSRRTTLCGTL 173
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNL 235
+L E+ E R EK D++S GV E + G+ + V+ +
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------ 227
Query: 236 LKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
+ F EG + LI R L + +RP + +V+
Sbjct: 228 --------FPDFVTEGARD---LISRLLKHNPSQRPMLREVL 258
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 23/201 (11%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQE----FIDEVCFLASIQHRNLVTLL-GYC 71
+G+G FG+VYK ++ ++A K ++E ++ E+ LAS H N+V LL +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 72 QENNLQFLIYEYIPNGSVS---IHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
ENNL LI E+ G+V + L P S+ ++ K L
Sbjct: 105 YENNLWILI-EFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN--------- 154
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLR----NFLGRTDVAGPSSQVTADEIFLASEVKE 184
+++H+D K N+L D K+AD G+ + R D + A E+ + K+
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKD 214
Query: 185 FRRFSEKSDVYSFGVFLLELV 205
R + K+DV+S G+ L+E+
Sbjct: 215 -RPYDYKADVWSLGITLIEMA 234
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGL-LQDG----MLVAIKK-----RPGAPTQEFIDEVCF 55
L F ++G G FG VYKGL + +G + VAIK+ P A +E +DE
Sbjct: 16 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYV 74
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
+AS+ + ++ LLG C + +Q LI + +P G + + V K + +
Sbjct: 75 MASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDY------VREHKDNIGSQYLLNWC 127
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
R+VH+D NVLV K+ D G LG + +
Sbjct: 128 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 187
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++A E R ++ +SDV+S+GV + EL++
Sbjct: 188 KWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 90/213 (42%), Gaps = 26/213 (12%)
Query: 7 ATKNFSDKNLIGEGKFGEVY-------KGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
A ++F +G+GKFG VY K +L +L + + EV + +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXX 118
+H N++ L GY + +LI EY P G+V L QKL +F + +
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--------QKLSKFDEQRTATYITEL 143
Query: 119 XXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQ---VTADE 175
RV+H+D K N+L+ K+AD G V PSS+ +
Sbjct: 144 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-------SVHAPSSRRDDLCGTL 196
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
+L E+ E R EK D++S GV E + G+
Sbjct: 197 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGL-LQDG----MLVAIKK-----RPGAPTQEFIDEVCF 55
L F ++G G FG VYKGL + +G + VAIK+ P A +E +DE
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYV 72
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
+AS+ + ++ LLG C + +Q LI + +P G + + V K + +
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDY------VREHKDNIGSQYLLNWC 125
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
R+VH+D NVLV K+ D G LG + +
Sbjct: 126 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 185
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++A E R ++ +SDV+S+GV + EL++
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 109/282 (38%), Gaps = 43/282 (15%)
Query: 7 ATKNFSDKNLIGEGKFGEVY-------KGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
A ++F +G+GKFG VY K +L +L + + EV + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXX 118
+H N++ L GY + +LI EY P G+V L QKL +F + +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--------QKLSKFDEQRTATYITEL 118
Query: 119 XXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT---ADE 175
RV+H+D K N+L+ K+AD G PSS+ T
Sbjct: 119 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-------SCHAPSSRRTTLSGTL 171
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNL 235
+L E+ E R EK D++S GV E + G+ + V
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--------- 222
Query: 236 LKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
E + F EG + LI R L + +RP + +V+
Sbjct: 223 -----EFTFPDFVTEGARD---LISRLLKHNPSQRPMLREVL 256
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGL-LQDG----MLVAIKK-----RPGAPTQEFIDEVCF 55
L F ++ G FG VYKGL + +G + VAIK+ P A +E +DE
Sbjct: 19 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYV 77
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
+AS+ + ++ LLG C + +Q LI + +P G + + V K + +
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDY------VREHKDNIGSQYLLNWC 130
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
R+VH+D NVLV K+ D GL LG + +
Sbjct: 131 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 190
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++A E R ++ +SDV+S+GV + EL++
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQE----FIDEVCFLASIQHRNLVTLL-GYC 71
+G+G FG+VYK ++ ++A K ++E ++ E+ LAS H N+V LL +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 72 QENNLQFLIYEYIPNGSVS---IHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
ENNL LI E+ G+V + L P S+ ++ K L
Sbjct: 105 YENNLWILI-EFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN--------- 154
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGL-----RNFLGRTDVAGPSSQVTADEIFLASEVK 183
+++H+D K N+L D K+AD G+ R R G + A E+ + K
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIG-TPYWMAPEVVMCETSK 213
Query: 184 EFRRFSEKSDVYSFGVFLLELV 205
+ R + K+DV+S G+ L+E+
Sbjct: 214 D-RPYDYKADVWSLGITLIEMA 234
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGL-LQDG----MLVAIKK-----RPGAPTQEFIDEVCF 55
L F ++G G FG VYKGL + +G + VAIK+ P A +E +DE
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYV 70
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
+AS+ + ++ LLG C + +Q LI + +P G + + V K + +
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDY------VREHKDNIGSQYLLNWC 123
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
R+VH+D NVLV K+ D G LG + +
Sbjct: 124 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 183
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++A E R ++ +SDV+S+GV + EL++
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGL-LQDG----MLVAIKK-----RPGAPTQEFIDEVCF 55
L F ++G G FG VYKGL + +G + VAIK+ P A +E +DE
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYV 72
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
+AS+ + ++ LLG C + +Q LI + +P G + + V K + +
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDY------VREHKDNIGSQYLLNWC 125
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
R+VH+D NVLV K+ D G LG + +
Sbjct: 126 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 185
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++A E R ++ +SDV+S+GV + EL++
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 86/207 (41%), Gaps = 21/207 (10%)
Query: 10 NFSDKNLIGEGKFGEVYKGL-LQDGMLVAIK---KRPGAPT--QEFIDEVCFLASIQHRN 63
N+ IG+G F +V + G VAIK K PT Q+ EV + + H N
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXX 123
+V L + +LI EY G V +L ++ ++ K R +
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK-- 130
Query: 124 XXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFL---GRTDVAGPSSQVTADEIFLAS 180
R+VH+D K N+L+D D K+AD G N G+ D S A E+F
Sbjct: 131 -----RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGK 185
Query: 181 EVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ + DV+S GV L LVSG
Sbjct: 186 KYD-----GPEVDVWSLGVILYTLVSG 207
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGL-LQDG----MLVAIKK-----RPGAPTQEFIDEVCF 55
L F ++ G FG VYKGL + +G + VAIK+ P A +E +DE
Sbjct: 12 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYV 70
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
+AS+ + ++ LLG C + +Q LI + +P G + + V K + +
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDY------VREHKDNIGSQYLLNWC 123
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
R+VH+D NVLV K+ D GL LG + +
Sbjct: 124 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++A E R ++ +SDV+S+GV + EL++
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGL-LQDG----MLVAIKK-----RPGAPTQEFIDEVCF 55
L F ++G G FG VYKGL + +G + VAIK+ P A +E +DE
Sbjct: 19 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYV 77
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
+AS+ + ++ LLG C + +Q LI + +P G + + V K + +
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDY------VREHKDNIGSQYLLNWC 130
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
R+VH+D NVLV K+ D G LG + +
Sbjct: 131 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 190
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++A E R ++ +SDV+S+GV + EL++
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 110/282 (39%), Gaps = 43/282 (15%)
Query: 7 ATKNFSDKNLIGEGKFGEVY-------KGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
A ++F +G+GKFG VY K +L +L + + EV + +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXX 118
+H N++ L GY + +LI EY P G+V L QKL +F + +
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--------QKLSKFDEQRTATYITEL 119
Query: 119 XXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT---ADE 175
RV+H+D K N+L+ K+A+ G V PSS+ T
Sbjct: 120 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGW-------SVHAPSSRRTTLCGTL 172
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNL 235
+L E+ E R EK D++S GV E + G+ + V
Sbjct: 173 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV--------- 223
Query: 236 LKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
E + F EG + LI R L + +RP + +V+
Sbjct: 224 -----EFTFPDFVTEGARD---LISRLLKHNPSQRPMLREVL 257
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGL-LQDG----MLVAIKK-----RPGAPTQEFIDEVCF 55
L F ++ G FG VYKGL + +G + VAIK+ P A +E +DE
Sbjct: 19 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA-NKEILDEAYV 77
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
+AS+ + ++ LLG C + +Q LI + +P G + + V K + +
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDY------VREHKDNIGSQYLLNWC 130
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
R+VH+D NVLV K+ D GL LG + +
Sbjct: 131 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 190
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++A E R ++ +SDV+S+GV + EL++
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 86/207 (41%), Gaps = 21/207 (10%)
Query: 10 NFSDKNLIGEGKFGEVYKGL-LQDGMLVAIK---KRPGAPT--QEFIDEVCFLASIQHRN 63
N+ IG+G F +V + G VAIK K PT Q+ EV + + H N
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXX 123
+V L + +LI EY G V +L ++ ++ K R +
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK-- 133
Query: 124 XXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFL---GRTDVAGPSSQVTADEIFLAS 180
R+VH+D K N+L+D D K+AD G N G+ D + A E+F
Sbjct: 134 -----RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGK 188
Query: 181 EVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ + DV+S GV L LVSG
Sbjct: 189 KYD-----GPEVDVWSLGVILYTLVSG 210
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 122/308 (39%), Gaps = 47/308 (15%)
Query: 11 FSDKNLI-----GEGKFGEVYKGLL------QDGMLVAIK--KRPGAPTQ--EFIDEVCF 55
F KNL+ GEG+FG+V K VA+K K +P++ + + E
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNV 79
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHL-----YGPSQVSRQKLEFKHRL 110
L + H +++ L G C ++ LI EY GS+ L GP + L
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 111 S------------IXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNF 158
I ++VH+D N+LV E K++D GL
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 159 LGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXX 218
+ D SQ ++A E ++ +SDV+SFGV L E+V+
Sbjct: 200 VYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT-----------L 248
Query: 219 XXXXVELVQNSRDFSNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVT 278
+ R F NLLK R+ + EE +L+++C ++RP +D+
Sbjct: 249 GGNPYPGIPPERLF-NLLKT-GHRM--ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISK 304
Query: 279 ELDRTLDK 286
+L++ + K
Sbjct: 305 DLEKMMVK 312
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 122/308 (39%), Gaps = 47/308 (15%)
Query: 11 FSDKNLI-----GEGKFGEVYKGLL------QDGMLVAIK--KRPGAPTQ--EFIDEVCF 55
F KNL+ GEG+FG+V K VA+K K +P++ + + E
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNV 79
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHL-----YGPSQVSRQKLEFKHRL 110
L + H +++ L G C ++ LI EY GS+ L GP + L
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 111 S------------IXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNF 158
I ++VH+D N+LV E K++D GL
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 159 LGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXX 218
+ D SQ ++A E ++ +SDV+SFGV L E+V+
Sbjct: 200 VYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT-----------L 248
Query: 219 XXXXVELVQNSRDFSNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVT 278
+ R F NLLK R+ + EE +L+++C ++RP +D+
Sbjct: 249 GGNPYPGIPPERLF-NLLKT-GHRM--ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISK 304
Query: 279 ELDRTLDK 286
+L++ + K
Sbjct: 305 DLEKMMVK 312
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 110/274 (40%), Gaps = 38/274 (13%)
Query: 16 LIGEGKFGEVYKGLLQDGMLVAIKK---RPGAPTQE-FIDEVCFLASIQHRNLVTLLGYC 71
++G+G FG+ K ++ V + K R TQ F+ EV + ++H N++ +G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 72 QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVV 131
++ I EYI G+ L G + + + R+S ++
Sbjct: 77 YKDKRLNFITEYIKGGT----LRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM--NII 130
Query: 132 HKDFKTANVLVDEDFIAKVADAGLRNFL--------GRTDVAGPSSQ----VTADEIFLA 179
H+D + N LV E+ VAD GL + G + P + V + ++A
Sbjct: 131 HRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMA 190
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFS-NLLKI 238
E+ R + EK DV+SFG+ L E++ A + + + DF N+
Sbjct: 191 PEMINGRSYDEKVDVFSFGIVLCEIIGRVNADP-----------DYLPRTMDFGLNVRGF 239
Query: 239 LDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPS 272
LD F + VRC D E+RPS
Sbjct: 240 LDRYCPPNCP----PSFFPITVRCCDLDPEKRPS 269
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 121/308 (39%), Gaps = 47/308 (15%)
Query: 11 FSDKNLI-----GEGKFGEVYKGLL------QDGMLVAIK--KRPGAPTQ--EFIDEVCF 55
F KNL+ GEG+FG+V K VA+K K +P++ + + E
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNV 79
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHL-----YGPSQVSRQKLEFKHRL 110
L + H +++ L G C ++ LI EY GS+ L GP + L
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 111 S------------IXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNF 158
I +VH+D N+LV E K++D GL
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 159 LGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXX 218
+ D SQ ++A E ++ +SDV+SFGV L E+V+
Sbjct: 200 VYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT-----------L 248
Query: 219 XXXXVELVQNSRDFSNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVT 278
+ R F NLLK R+ + EE +L+++C ++RP +D+
Sbjct: 249 GGNPYPGIPPERLF-NLLKT-GHRM--ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISK 304
Query: 279 ELDRTLDK 286
+L++ + K
Sbjct: 305 DLEKMMVK 312
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 89/201 (44%), Gaps = 21/201 (10%)
Query: 17 IGEGKFGEVYKGLL---QDGMLVAIK----KRPGAPTQEFIDEVCFLASIQHRNLVTLLG 69
+G G FG V +G+ + + VAIK A T+E + E + + + +V L+G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 70 YCQENNLQFLIYEYIPNGSVSIHLYGPSQ---VSRQKLEFKHRLSIXXXXXXXXXXXXXX 126
CQ L L+ E G + L G + VS E H++S+
Sbjct: 78 VCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVA-ELLHQVSMGMKYLEEK------ 129
Query: 127 XPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI-FLASEVKEF 185
VH+D NVL+ AK++D GL LG D + + + A E F
Sbjct: 130 --NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINF 187
Query: 186 RRFSEKSDVYSFGVFLLELVS 206
R+FS +SDV+S+GV + E +S
Sbjct: 188 RKFSSRSDVWSYGVTMWEALS 208
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 21/222 (9%)
Query: 2 EELSLATKNFSDKNLIGEGKFGEVY----KGLLQDG--MLVAIKKRPGAPTQ----EFID 51
+E +A + + +G+G FG VY KG+++D VAIK A + EF++
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 62
Query: 52 EVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLS 111
E + ++V LLG + +I E + G + +L + R ++E L+
Sbjct: 63 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL----RSLRPEMENNPVLA 118
Query: 112 -------IXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDV 164
I + VH+D N +V EDF K+ D G+ + TD
Sbjct: 119 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDX 178
Query: 165 AGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
+ +++ E + F+ SDV+SFGV L E+ +
Sbjct: 179 XRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 21/222 (9%)
Query: 2 EELSLATKNFSDKNLIGEGKFGEVY----KGLLQDG--MLVAIKKRPGAPTQ----EFID 51
+E +A + + +G+G FG VY KG+++D VAIK A + EF++
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 71
Query: 52 EVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLS 111
E + ++V LLG + +I E + G + +L + R ++E L+
Sbjct: 72 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL----RSLRPEMENNPVLA 127
Query: 112 -------IXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDV 164
I + VH+D N +V EDF K+ D G+ + TD
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDX 187
Query: 165 AGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
+ +++ E + F+ SDV+SFGV L E+ +
Sbjct: 188 XRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 91/206 (44%), Gaps = 18/206 (8%)
Query: 12 SDKNLIGEGKFGEVYKG----LLQDGMLVAIKK----RPGAPTQEFIDEVCFLASIQHRN 63
SD+ +IG+G FG VY G Q+ + AIK + F+ E + + H N
Sbjct: 25 SDR-VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPN 83
Query: 64 LVTLLG-YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXX 122
++ L+G L ++ Y+ +G + + P + K L +
Sbjct: 84 VLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ 143
Query: 123 XXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEI-FLAS 180
+ VH+D N ++DE F KVAD GL R+ L R + + + + A
Sbjct: 144 ------KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTAL 197
Query: 181 EVKEFRRFSEKSDVYSFGVFLLELVS 206
E + RF+ KSDV+SFGV L EL++
Sbjct: 198 ESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 93/202 (46%), Gaps = 23/202 (11%)
Query: 17 IGEGKFGEVYKGLLQDGML---VAIKKRPGAPTQE------FIDEVCFLASIQHRNLVTL 67
+G G VY L +D +L VAIK P ++ F EV + + H+N+V++
Sbjct: 19 LGGGGMSTVY--LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSM 76
Query: 68 LGYCQENNLQFLIYEYI--PNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
+ +E++ +L+ EYI P S I +GP V + F +++
Sbjct: 77 IDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVD-TAINFTNQI--------LDGIKHA 127
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEF 185
R+VH+D K N+L+D + K+ D G+ L T + ++ V + + E +
Sbjct: 128 HDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT-QTNHVLGTVQYFSPEQAKG 186
Query: 186 RRFSEKSDVYSFGVFLLELVSG 207
E +D+YS G+ L E++ G
Sbjct: 187 EATDECTDIYSIGIVLYEMLVG 208
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 89/212 (41%), Gaps = 27/212 (12%)
Query: 15 NLIGEGKFGEVYKGLL--QDG--MLVAIK-----KRPGAPTQEFIDEVCFLASIQHRNLV 65
++GEG+FG V +G L +DG + VA+K +EF+ E + H N++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 66 TLLGYCQENNLQ-----FLIYEYIPNGSVSIHLY------GPSQVSRQKLEFKHRLSIXX 114
LLG C E + Q +I ++ G + +L GP + Q L K + I
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTL-LKFMVDIAL 158
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTAD 174
+H+D N ++ +D VAD GL + D
Sbjct: 159 GMEYLSNR------NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMP 212
Query: 175 EIFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++A E R ++ KSDV++FGV + E+ +
Sbjct: 213 VKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 21/222 (9%)
Query: 2 EELSLATKNFSDKNLIGEGKFGEVY----KGLLQDG--MLVAIKKRPGAPTQ----EFID 51
+E +A + + +G+G FG VY KG+++D VAIK A + EF++
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 52 EVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLS 111
E + ++V LLG + +I E + G + +L + R ++E L+
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL----RSLRPEMENNPVLA 120
Query: 112 -------IXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDV 164
I + VH+D N +V EDF K+ D G+ + TD
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 180
Query: 165 AGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
+ +++ E + F+ SDV+SFGV L E+ +
Sbjct: 181 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 17 IGEGKFGEVYKGL---LQDGMLVAI--KKRPGAPTQEFIDEVCFLASIQHRNLVTLLGYC 71
+GEG +GEV + ++ + V I KR + E+C A + H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 72 QENNLQFLIYEYIPNGSVSIHL---YGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
+E N+Q+L EY G + + G + Q+ F H+L
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHGIG------- 125
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRF 188
+ H+D K N+L+DE K++D GL + +++ ++A E+ + R F
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 189 -SEKSDVYSFGVFLLELVSG 207
+E DV+S G+ L +++G
Sbjct: 185 HAEPVDVWSCGIVLTAMLAG 204
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 21/222 (9%)
Query: 2 EELSLATKNFSDKNLIGEGKFGEVY----KGLLQDG--MLVAIKKRPGAPTQ----EFID 51
+E +A + + +G+G FG VY KG+++D VAIK A + EF++
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 70
Query: 52 EVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLS 111
E + ++V LLG + +I E + G + +L + R ++E L+
Sbjct: 71 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL----RSLRPEMENNPVLA 126
Query: 112 -------IXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDV 164
I + VH+D N +V EDF K+ D G+ + TD
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 186
Query: 165 AGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
+ +++ E + F+ SDV+SFGV L E+ +
Sbjct: 187 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 96/206 (46%), Gaps = 35/206 (16%)
Query: 17 IGEGKFGEVYKGLLQD-GMLVA---IKKRPGAPTQEFIDEVCFLASIQHRNLVTLLGYCQ 72
+G+G FG+VYK ++ G L A I+ + +++I E+ LA+ H +V LLG
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 73 ENNLQFLIYEYIPNGSVSIHLY----GPSQ-----VSRQKLEFKHRLSIXXXXXXXXXXX 123
+ +++ E+ P G+V + G ++ V RQ LE + L
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH------------ 126
Query: 124 XXXXPRVVHKDFKTANVLVDEDFIAKVADAG-----LRNFLGRTDVAGPSSQVTADEIFL 178
R++H+D K NVL+ + ++AD G L+ R G + A E+ +
Sbjct: 127 ---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIG-TPYWMAPEVVM 182
Query: 179 ASEVKEFRRFSEKSDVYSFGVFLLEL 204
+K+ + K+D++S G+ L+E+
Sbjct: 183 CETMKD-TPYDYKADIWSLGITLIEM 207
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 21/222 (9%)
Query: 2 EELSLATKNFSDKNLIGEGKFGEVY----KGLLQDG--MLVAIKKRPGAPTQ----EFID 51
+E +A + + +G+G FG VY KG+++D VAIK A + EF++
Sbjct: 9 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 68
Query: 52 EVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLS 111
E + ++V LLG + +I E + G + +L + R ++E L+
Sbjct: 69 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL----RSLRPEMENNPVLA 124
Query: 112 -------IXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDV 164
I + VH+D N +V EDF K+ D G+ + TD
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 184
Query: 165 AGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
+ +++ E + F+ SDV+SFGV L E+ +
Sbjct: 185 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 21/222 (9%)
Query: 2 EELSLATKNFSDKNLIGEGKFGEVY----KGLLQDG--MLVAIKKRPGAPTQ----EFID 51
+E +A + + +G+G FG VY KG+++D VAIK A + EF++
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 71
Query: 52 EVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLS 111
E + ++V LLG + +I E + G + +L + R ++E L+
Sbjct: 72 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL----RSLRPEMENNPVLA 127
Query: 112 -------IXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDV 164
I + VH+D N +V EDF K+ D G+ + TD
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 187
Query: 165 AGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
+ +++ E + F+ SDV+SFGV L E+ +
Sbjct: 188 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 90/204 (44%), Gaps = 27/204 (13%)
Query: 17 IGEGKFGEVYKGLL---QDGMLVAIK----KRPGAPTQEFIDEVCFLASIQHRNLVTLLG 69
+G G FG V +G+ + + VAIK A T+E + E + + + +V L+G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 70 YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL------EFKHRLSIXXXXXXXXXXX 123
CQ L L+ E G + L G R+++ E H++S+
Sbjct: 404 VCQAEAL-MLVMEMAGGGPLHKFLVG----KREEIPVSNVAELLHQVSMGMKYLEEK--- 455
Query: 124 XXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI-FLASEV 182
VH++ NVL+ AK++D GL LG D + + + A E
Sbjct: 456 -----NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPEC 510
Query: 183 KEFRRFSEKSDVYSFGVFLLELVS 206
FR+FS +SDV+S+GV + E +S
Sbjct: 511 INFRKFSSRSDVWSYGVTMWEALS 534
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 21/222 (9%)
Query: 2 EELSLATKNFSDKNLIGEGKFGEVY----KGLLQDG--MLVAIKKRPGAPTQ----EFID 51
+E +A + + +G+G FG VY KG+++D VAIK A + EF++
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 70
Query: 52 EVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLS 111
E + ++V LLG + +I E + G + +L + R ++E L+
Sbjct: 71 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL----RSLRPEMENNPVLA 126
Query: 112 -------IXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDV 164
I + VH+D N +V EDF K+ D G+ + TD
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 186
Query: 165 AGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
+ +++ E + F+ SDV+SFGV L E+ +
Sbjct: 187 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 93/219 (42%), Gaps = 15/219 (6%)
Query: 2 EELSLATKNFSDKNLIGEGKFGEVY----KGLLQDG--MLVAIKKRPGAPTQ----EFID 51
+E +A + + +G+G FG VY KG+++D VAIK A + EF++
Sbjct: 8 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 67
Query: 52 EVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYG--PSQVSRQKLEFKHR 109
E + ++V LLG + +I E + G + +L P+ + L
Sbjct: 68 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA-PPS 126
Query: 110 LS--IXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGP 167
LS I + VH+D N +V EDF K+ D G+ + TD
Sbjct: 127 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 186
Query: 168 SSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
+ +++ E + F+ SDV+SFGV L E+ +
Sbjct: 187 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 21/222 (9%)
Query: 2 EELSLATKNFSDKNLIGEGKFGEVY----KGLLQDG--MLVAIKKRPGAPTQ----EFID 51
+E +A + + +G+G FG VY KG+++D VAIK A + EF++
Sbjct: 40 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 99
Query: 52 EVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLS 111
E + ++V LLG + +I E + G + +L + R ++E L+
Sbjct: 100 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL----RSLRPEMENNPVLA 155
Query: 112 -------IXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDV 164
I + VH+D N +V EDF K+ D G+ + TD
Sbjct: 156 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 215
Query: 165 AGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
+ +++ E + F+ SDV+SFGV L E+ +
Sbjct: 216 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 120/305 (39%), Gaps = 74/305 (24%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK------RPGAPTQEFIDEVCFLASIQHRNLVTLLGY 70
+GEG +G VYK G +VA+K+ G P+ I E+ L + H N+V+L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTA-IREISLLKELHHPNIVSLIDV 87
Query: 71 CQENNLQFLIYEY---------------IPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
L++E+ + + + I+LY Q+ R
Sbjct: 88 IHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLY---QLLRGVAHCHQH------ 138
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT--- 172
R++H+D K N+L++ D K+AD GL G + VT
Sbjct: 139 -------------RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWY 185
Query: 173 -ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELV---QN 228
A ++ + S +++S D++S G E+++G+ + + N
Sbjct: 186 RAPDVLMGS-----KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPN 240
Query: 229 SRDFSNL----------LKILDERLWST----FTNEGMEEFIQLIVRCLDPSSERRPSMS 274
R++ + ++ +++ WS+ F EG++ ++ C DP+ +R S
Sbjct: 241 PREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNML--CFDPN--KRISAR 296
Query: 275 DVVTE 279
D +
Sbjct: 297 DAMNH 301
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 35/207 (16%)
Query: 17 IGEGKFGEVYKGLLQD-GMLVA---IKKRPGAPTQEFIDEVCFLASIQHRNLVTLLGYCQ 72
+G+G FG+VYK ++ G L A I+ + +++I E+ LA+ H +V LLG
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 73 ENNLQFLIYEYIPNGSVSI-------HLYGP--SQVSRQKLEFKHRLSIXXXXXXXXXXX 123
+ +++ E+ P G+V L P V RQ LE + L
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH------------ 134
Query: 124 XXXXPRVVHKDFKTANVLVDEDFIAKVADAG-----LRNFLGRTDVAGPSSQVTADEIFL 178
R++H+D K NVL+ + ++AD G L+ R G + A E+ +
Sbjct: 135 ---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIG-TPYWMAPEVVM 190
Query: 179 ASEVKEFRRFSEKSDVYSFGVFLLELV 205
+K+ + K+D++S G+ L+E+
Sbjct: 191 CETMKD-TPYDYKADIWSLGITLIEMA 216
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 23/207 (11%)
Query: 9 KNFSDKNLIGEGKFGEVYKGL-LQDGMLVAIKK------RPGAPTQEFIDEVCFLASIQH 61
K FSD IG G FG VY +++ +VAIKK + Q+ I EV FL ++H
Sbjct: 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH 113
Query: 62 RNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXX 121
N + G + +L+ EY GS S L +V ++ L+ ++
Sbjct: 114 PNTIQYRGCYLREHTAWLVMEYC-LGSASDLL----EVHKKPLQEVEIAAVTHGALQGLA 168
Query: 122 XXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASE 181
++H+D K N+L+ E + K+ D G + P++ ++A E
Sbjct: 169 YLHSH--NMIHRDVKAGNILLSEPGLVKLGD------FGSASIMAPANXFVGTPYWMAPE 220
Query: 182 V---KEFRRFSEKSDVYSFGVFLLELV 205
V + ++ K DV+S G+ +EL
Sbjct: 221 VILAMDEGQYDGKVDVWSLGITCIELA 247
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 120/305 (39%), Gaps = 74/305 (24%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK------RPGAPTQEFIDEVCFLASIQHRNLVTLLGY 70
+GEG +G VYK G +VA+K+ G P+ I E+ L + H N+V+L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTA-IREISLLKELHHPNIVSLIDV 87
Query: 71 CQENNLQFLIYEY---------------IPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
L++E+ + + + I+LY Q+ R
Sbjct: 88 IHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLY---QLLRGVAHCHQH------ 138
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT--- 172
R++H+D K N+L++ D K+AD GL G + VT
Sbjct: 139 -------------RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWY 185
Query: 173 -ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELV---QN 228
A ++ + S +++S D++S G E+++G+ + + N
Sbjct: 186 RAPDVLMGS-----KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPN 240
Query: 229 SRDFSNL----------LKILDERLWST----FTNEGMEEFIQLIVRCLDPSSERRPSMS 274
R++ + ++ +++ WS+ F EG++ ++ C DP+ +R S
Sbjct: 241 PREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNML--CFDPN--KRISAR 296
Query: 275 DVVTE 279
D +
Sbjct: 297 DAMNH 301
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 21/222 (9%)
Query: 2 EELSLATKNFSDKNLIGEGKFGEVY----KGLLQDG--MLVAIKKRPGAPTQ----EFID 51
+E +A + + +G+G FG VY KG+++D VAIK A + EF++
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 77
Query: 52 EVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLS 111
E + ++V LLG + +I E + G + +L + R ++E L+
Sbjct: 78 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL----RSLRPEMENNPVLA 133
Query: 112 -------IXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDV 164
I + VH+D N +V EDF K+ D G+ + TD
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 193
Query: 165 AGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
+ +++ E + F+ SDV+SFGV L E+ +
Sbjct: 194 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 93/219 (42%), Gaps = 15/219 (6%)
Query: 2 EELSLATKNFSDKNLIGEGKFGEVY----KGLLQDG--MLVAIKKRPGAPTQ----EFID 51
+E +A + + +G+G FG VY KG+++D VAIK A + EF++
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 77
Query: 52 EVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYG--PSQVSRQKLEFKHR 109
E + ++V LLG + +I E + G + +L P+ + L
Sbjct: 78 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA-PPS 136
Query: 110 LS--IXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGP 167
LS I + VH+D N +V EDF K+ D G+ + TD
Sbjct: 137 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 196
Query: 168 SSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
+ +++ E + F+ SDV+SFGV L E+ +
Sbjct: 197 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 84/207 (40%), Gaps = 21/207 (10%)
Query: 10 NFSDKNLIGEGKFGEVYKGL-LQDGMLVAIK-----KRPGAPTQEFIDEVCFLASIQHRN 63
N+ IG+G F +V + G VA+K + + Q+ EV + + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXX 123
+V L + +L+ EY G V +L ++ ++ K R +
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF- 133
Query: 124 XXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRN---FLGRTDVAGPSSQVTADEIFLAS 180
+VH+D K N+L+D D K+AD G N F + D S A E+F
Sbjct: 134 ------IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGK 187
Query: 181 EVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ + DV+S GV L LVSG
Sbjct: 188 KYD-----GPEVDVWSLGVILYTLVSG 209
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 84/207 (40%), Gaps = 21/207 (10%)
Query: 10 NFSDKNLIGEGKFGEVYKGL-LQDGMLVAIK-----KRPGAPTQEFIDEVCFLASIQHRN 63
N+ IG+G F +V + G VA+K + + Q+ EV + + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXX 123
+V L + +L+ EY G V +L ++ ++ K R +
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF- 133
Query: 124 XXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRN---FLGRTDVAGPSSQVTADEIFLAS 180
+VH+D K N+L+D D K+AD G N F + D S A E+F
Sbjct: 134 ------IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGK 187
Query: 181 EVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ + DV+S GV L LVSG
Sbjct: 188 KYD-----GPEVDVWSLGVILYTLVSG 209
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 85/207 (41%), Gaps = 21/207 (10%)
Query: 10 NFSDKNLIGEGKFGEVYKGL-LQDGMLVAIK---KRPGAPT--QEFIDEVCFLASIQHRN 63
N+ + IG+G F +V + G VA+K K PT Q+ EV + + H N
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXX 123
+V L + +L+ EY G V +L ++ ++ K R +
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKY- 134
Query: 124 XXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFL---GRTDVAGPSSQVTADEIFLAS 180
+VH+D K N+L+D D K+AD G N + D S A E+F
Sbjct: 135 ------IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGK 188
Query: 181 EVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ + DV+S GV L LVSG
Sbjct: 189 KYD-----GPEVDVWSLGVILYTLVSG 210
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 84/211 (39%), Gaps = 21/211 (9%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGL-LQDGMLVAIK-----KRPGAPTQEFIDEVCFLASI 59
L N+ IG+G F +V + G VA+K + + Q+ EV + +
Sbjct: 4 LHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVL 63
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
H N+V L + +L+ EY G V +L + ++ K R +
Sbjct: 64 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCH 123
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRN---FLGRTDVAGPSSQVTADEI 176
+VH+D K N+L+D D K+AD G N F + D S A E+
Sbjct: 124 QKF-------IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPEL 176
Query: 177 FLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
F + + DV+S GV L LVSG
Sbjct: 177 FQGKKYD-----GPEVDVWSLGVILYTLVSG 202
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 23/207 (11%)
Query: 9 KNFSDKNLIGEGKFGEVYKGL-LQDGMLVAIKK------RPGAPTQEFIDEVCFLASIQH 61
K FSD IG G FG VY +++ +VAIKK + Q+ I EV FL ++H
Sbjct: 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH 74
Query: 62 RNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXX 121
N + G + +L+ EY GS S L +V ++ L+ ++
Sbjct: 75 PNTIQYRGCYLREHTAWLVMEYC-LGSASDLL----EVHKKPLQEVEIAAVTHGALQGLA 129
Query: 122 XXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASE 181
++H+D K N+L+ E + K+ D G + P++ ++A E
Sbjct: 130 YLHSH--NMIHRDVKAGNILLSEPGLVKLGD------FGSASIMAPANXFVGTPYWMAPE 181
Query: 182 V---KEFRRFSEKSDVYSFGVFLLELV 205
V + ++ K DV+S G+ +EL
Sbjct: 182 VILAMDEGQYDGKVDVWSLGITCIELA 208
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 90/227 (39%), Gaps = 55/227 (24%)
Query: 9 KNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKK------RPGAPTQEFIDEVCFLASIQH 61
+NF IGEG +G VYK + G +VA+KK G P+ I E+ L + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 61
Query: 62 RNLVTLLGYCQENNLQFLIYEY----------------IPNGSVSIHLYGPSQVSRQKLE 105
N+V LL N +L++E+ IP + +L+ Q L
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ----LLQGLS 117
Query: 106 FKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVA 165
F H RV+H+D K N+L++ + K+AD GL G
Sbjct: 118 FCH------------------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 159
Query: 166 GPSSQVT----ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
VT A EI L + +S D++S G E+V+ R
Sbjct: 160 YTHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 91/229 (39%), Gaps = 55/229 (24%)
Query: 7 ATKNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKK------RPGAPTQEFIDEVCFLASI 59
+ +NF IGEG +G VYK + G +VA+KK G P+ I E+ L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKEL 60
Query: 60 QHRNLVTLLGYCQENNLQFLIYEY----------------IPNGSVSIHLYGPSQVSRQK 103
H N+V LL N +L++E+ IP + +L+ Q
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ----LLQG 116
Query: 104 LEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTD 163
L F H RV+H+D K N+L++ + K+AD GL G
Sbjct: 117 LAFCH------------------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 158
Query: 164 VAGPSSQVT----ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
VT A EI L + +S D++S G E+V+ R
Sbjct: 159 RTYTHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 91/229 (39%), Gaps = 55/229 (24%)
Query: 7 ATKNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKK------RPGAPTQEFIDEVCFLASI 59
+ +NF IGEG +G VYK + G +VA+KK G P+ I E+ L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKEL 62
Query: 60 QHRNLVTLLGYCQENNLQFLIYEY----------------IPNGSVSIHLYGPSQVSRQK 103
H N+V LL N +L++E+ IP + +L+ Q
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQ----LLQG 118
Query: 104 LEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTD 163
L F H RV+H+D K N+L++ + K+AD GL G
Sbjct: 119 LAFCHSH------------------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 160
Query: 164 VAGPSSQVT----ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
VT A EI L + +S D++S G E+V+ R
Sbjct: 161 RTYXHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 91/229 (39%), Gaps = 55/229 (24%)
Query: 7 ATKNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKK------RPGAPTQEFIDEVCFLASI 59
+ +NF IGEG +G VYK + G +VA+KK G P+ I E+ L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKEL 62
Query: 60 QHRNLVTLLGYCQENNLQFLIYEY----------------IPNGSVSIHLYGPSQVSRQK 103
H N+V LL N +L++E+ IP + +L+ Q
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQ----LLQG 118
Query: 104 LEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTD 163
L F H RV+H+D K N+L++ + K+AD GL G
Sbjct: 119 LAFCHSH------------------RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPV 160
Query: 164 VAGPSSQVT----ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
VT A EI L + +S D++S G E+V+ R
Sbjct: 161 RTYXHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 21/222 (9%)
Query: 2 EELSLATKNFSDKNLIGEGKFGEVY----KGLLQDG--MLVAIKKRPGAPTQ----EFID 51
+E +A + + +G+G FG VY KG+++D VAIK A + EF++
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 52 EVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLS 111
E + ++V LLG + +I E + G + +L + R ++E L+
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL----RSLRPEMENNPVLA 120
Query: 112 -------IXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDV 164
I + VH+D N V EDF K+ D G+ + TD
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDY 180
Query: 165 AGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
+ +++ E + F+ SDV+SFGV L E+ +
Sbjct: 181 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 90/227 (39%), Gaps = 55/227 (24%)
Query: 9 KNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKK------RPGAPTQEFIDEVCFLASIQH 61
+NF IGEG +G VYK + G +VA+KK G P+ I E+ L + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 61
Query: 62 RNLVTLLGYCQENNLQFLIYEY----------------IPNGSVSIHLYGPSQVSRQKLE 105
N+V LL N +L++E+ IP + +L+ Q L
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ----LLQGLA 117
Query: 106 FKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVA 165
F H RV+H+D K N+L++ + K+AD GL G
Sbjct: 118 FCH------------------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 159
Query: 166 GPSSQVT----ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
VT A EI L + +S D++S G E+V+ R
Sbjct: 160 YTHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 90/227 (39%), Gaps = 55/227 (24%)
Query: 9 KNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKK------RPGAPTQEFIDEVCFLASIQH 61
+NF IGEG +G VYK + G +VA+KK G P+ I E+ L + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 60
Query: 62 RNLVTLLGYCQENNLQFLIYEY----------------IPNGSVSIHLYGPSQVSRQKLE 105
N+V LL N +L++E+ IP + +L+ Q L
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ----LLQGLA 116
Query: 106 FKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVA 165
F H RV+H+D K N+L++ + K+AD GL G
Sbjct: 117 FCH------------------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 158
Query: 166 GPSSQVT----ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
VT A EI L + +S D++S G E+V+ R
Sbjct: 159 YTHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 91/229 (39%), Gaps = 55/229 (24%)
Query: 7 ATKNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKK------RPGAPTQEFIDEVCFLASI 59
+ +NF IGEG +G VYK + G +VA+KK G P+ I E+ L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKEL 59
Query: 60 QHRNLVTLLGYCQENNLQFLIYEY----------------IPNGSVSIHLYGPSQVSRQK 103
H N+V LL N +L++E+ IP + +L+ Q
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQ----LLQG 115
Query: 104 LEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTD 163
L F H RV+H+D K N+L++ + K+AD GL G
Sbjct: 116 LAFCH------------------SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPV 157
Query: 164 VAGPSSQVT----ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
VT A EI L + +S D++S G E+V+ R
Sbjct: 158 RTYXHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 91/229 (39%), Gaps = 55/229 (24%)
Query: 7 ATKNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKK------RPGAPTQEFIDEVCFLASI 59
+ +NF IGEG +G VYK + G +VA+KK G P+ I E+ L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKEL 59
Query: 60 QHRNLVTLLGYCQENNLQFLIYEY----------------IPNGSVSIHLYGPSQVSRQK 103
H N+V LL N +L++E+ IP + +L+ Q
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ----LLQG 115
Query: 104 LEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTD 163
L F H RV+H+D K N+L++ + K+AD GL G
Sbjct: 116 LAFCH------------------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 157
Query: 164 VAGPSSQVT----ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
VT A EI L + +S D++S G E+V+ R
Sbjct: 158 RTYXHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 91/229 (39%), Gaps = 55/229 (24%)
Query: 7 ATKNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKK------RPGAPTQEFIDEVCFLASI 59
+ +NF IGEG +G VYK + G +VA+KK G P+ I E+ L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKEL 59
Query: 60 QHRNLVTLLGYCQENNLQFLIYEY----------------IPNGSVSIHLYGPSQVSRQK 103
H N+V LL N +L++E+ IP + +L+ Q
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ----LLQG 115
Query: 104 LEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTD 163
L F H RV+H+D K N+L++ + K+AD GL G
Sbjct: 116 LAFCHSH------------------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 157
Query: 164 VAGPSSQVT----ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
VT A EI L + +S D++S G E+V+ R
Sbjct: 158 RTYXHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 91/229 (39%), Gaps = 55/229 (24%)
Query: 7 ATKNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKK------RPGAPTQEFIDEVCFLASI 59
+ +NF IGEG +G VYK + G +VA+KK G P+ I E+ L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKEL 59
Query: 60 QHRNLVTLLGYCQENNLQFLIYEY----------------IPNGSVSIHLYGPSQVSRQK 103
H N+V LL N +L++E+ IP + +L+ Q
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ----LLQG 115
Query: 104 LEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTD 163
L F H RV+H+D K N+L++ + K+AD GL G
Sbjct: 116 LAFCH------------------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 157
Query: 164 VAGPSSQVT----ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
VT A EI L + +S D++S G E+V+ R
Sbjct: 158 RTYXHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 91/229 (39%), Gaps = 55/229 (24%)
Query: 7 ATKNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKK------RPGAPTQEFIDEVCFLASI 59
+ +NF IGEG +G VYK + G +VA+KK G P+ I E+ L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKEL 60
Query: 60 QHRNLVTLLGYCQENNLQFLIYEY----------------IPNGSVSIHLYGPSQVSRQK 103
H N+V LL N +L++E+ IP + +L+ Q
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQ----LLQG 116
Query: 104 LEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTD 163
L F H RV+H+D K N+L++ + K+AD GL G
Sbjct: 117 LAFCH------------------SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPV 158
Query: 164 VAGPSSQVT----ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
VT A EI L + +S D++S G E+V+ R
Sbjct: 159 RTYXHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 91/229 (39%), Gaps = 55/229 (24%)
Query: 7 ATKNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKK------RPGAPTQEFIDEVCFLASI 59
+ +NF IGEG +G VYK + G +VA+KK G P+ I E+ L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKEL 61
Query: 60 QHRNLVTLLGYCQENNLQFLIYEY----------------IPNGSVSIHLYGPSQVSRQK 103
H N+V LL N +L++E+ IP + +L+ Q
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQ----LLQG 117
Query: 104 LEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTD 163
L F H RV+H+D K N+L++ + K+AD GL G
Sbjct: 118 LAFCH------------------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 159
Query: 164 VAGPSSQVT----ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
VT A EI L + +S D++S G E+V+ R
Sbjct: 160 RTYXHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 84/207 (40%), Gaps = 21/207 (10%)
Query: 10 NFSDKNLIGEGKFGEVYKGL-LQDGMLVAIK-----KRPGAPTQEFIDEVCFLASIQHRN 63
N+ IG+G F +V + G VA++ + + Q+ EV + + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXX 123
+V L + +L+ EY G V +L ++ ++ K R +
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF- 133
Query: 124 XXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRN---FLGRTDVAGPSSQVTADEIFLAS 180
+VH+D K N+L+D D K+AD G N F + D S A E+F
Sbjct: 134 ------IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGK 187
Query: 181 EVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ + DV+S GV L LVSG
Sbjct: 188 KYD-----GPEVDVWSLGVILYTLVSG 209
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 91/229 (39%), Gaps = 55/229 (24%)
Query: 7 ATKNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKK------RPGAPTQEFIDEVCFLASI 59
+ +NF IGEG +G VYK + G +VA+KK G P+ I E+ L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKEL 60
Query: 60 QHRNLVTLLGYCQENNLQFLIYEY----------------IPNGSVSIHLYGPSQVSRQK 103
H N+V LL N +L++E+ IP + +L+ Q
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ----LLQG 116
Query: 104 LEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTD 163
L F H RV+H+D K N+L++ + K+AD GL G
Sbjct: 117 LAFCH------------------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 158
Query: 164 VAGPSSQVT----ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
VT A EI L + +S D++S G E+V+ R
Sbjct: 159 RTYXHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 91/229 (39%), Gaps = 55/229 (24%)
Query: 7 ATKNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKK------RPGAPTQEFIDEVCFLASI 59
+ +NF IGEG +G VYK + G +VA+KK G P+ I E+ L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKEL 62
Query: 60 QHRNLVTLLGYCQENNLQFLIYEY----------------IPNGSVSIHLYGPSQVSRQK 103
H N+V LL N +L++E+ IP + +L+ Q
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQ----LLQG 118
Query: 104 LEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTD 163
L F H RV+H+D K N+L++ + K+AD GL G
Sbjct: 119 LAFCHSH------------------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 160
Query: 164 VAGPSSQVT----ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
VT A EI L + +S D++S G E+V+ R
Sbjct: 161 RTYXHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 91/229 (39%), Gaps = 55/229 (24%)
Query: 7 ATKNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKK------RPGAPTQEFIDEVCFLASI 59
+ +NF IGEG +G VYK + G +VA+KK G P+ I E+ L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKEL 62
Query: 60 QHRNLVTLLGYCQENNLQFLIYEY----------------IPNGSVSIHLYGPSQVSRQK 103
H N+V LL N +L++E+ IP + +L+ Q
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ----LLQG 118
Query: 104 LEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTD 163
L F H RV+H+D K N+L++ + K+AD GL G
Sbjct: 119 LAFCHSH------------------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 160
Query: 164 VAGPSSQVT----ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
VT A EI L + +S D++S G E+V+ R
Sbjct: 161 RTYXHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 90/227 (39%), Gaps = 55/227 (24%)
Query: 9 KNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKK------RPGAPTQEFIDEVCFLASIQH 61
+NF IGEG +G VYK + G +VA+KK G P+ I E+ L + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 61
Query: 62 RNLVTLLGYCQENNLQFLIYEY----------------IPNGSVSIHLYGPSQVSRQKLE 105
N+V LL N +L++E+ IP + +L+ Q L
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ----LLQGLA 117
Query: 106 FKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVA 165
F H RV+H+D K N+L++ + K+AD GL G
Sbjct: 118 FCH------------------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV---- 155
Query: 166 GPSSQVTADEIFLASEVKEF----RRFSEKSDVYSFGVFLLELVSGR 208
P T + + L E + +S D++S G E+V+ R
Sbjct: 156 -PVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 91/229 (39%), Gaps = 55/229 (24%)
Query: 7 ATKNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKK------RPGAPTQEFIDEVCFLASI 59
+ +NF IGEG +G VYK + G +VA+KK G P+ I E+ L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKEL 59
Query: 60 QHRNLVTLLGYCQENNLQFLIYEY----------------IPNGSVSIHLYGPSQVSRQK 103
H N+V LL N +L++E+ IP + +L+ Q
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ----LLQG 115
Query: 104 LEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTD 163
L F H RV+H+D K N+L++ + K+AD GL G
Sbjct: 116 LAFCH------------------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 157
Query: 164 VAGPSSQVT----ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
VT A EI L + +S D++S G E+V+ R
Sbjct: 158 RTYXHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 90/227 (39%), Gaps = 55/227 (24%)
Query: 9 KNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKK------RPGAPTQEFIDEVCFLASIQH 61
+NF IGEG +G VYK + G +VA+KK G P+ I E+ L + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 60
Query: 62 RNLVTLLGYCQENNLQFLIYEY----------------IPNGSVSIHLYGPSQVSRQKLE 105
N+V LL N +L++E+ IP + +L+ Q L
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ----LLQGLA 116
Query: 106 FKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVA 165
F H RV+H+D K N+L++ + K+AD GL G
Sbjct: 117 FCH------------------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 158
Query: 166 GPSSQVT----ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
VT A EI L + +S D++S G E+V+ R
Sbjct: 159 YTHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 90/227 (39%), Gaps = 55/227 (24%)
Query: 9 KNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKK------RPGAPTQEFIDEVCFLASIQH 61
+NF IGEG +G VYK + G +VA+KK G P+ I E+ L + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 68
Query: 62 RNLVTLLGYCQENNLQFLIYEY----------------IPNGSVSIHLYGPSQVSRQKLE 105
N+V LL N +L++E+ IP + +L+ Q L
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ----LLQGLA 124
Query: 106 FKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVA 165
F H RV+H+D K N+L++ + K+AD GL G
Sbjct: 125 FCHSH------------------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV---- 162
Query: 166 GPSSQVTADEIFLASEVKEF----RRFSEKSDVYSFGVFLLELVSGR 208
P T + + L E + +S D++S G E+V+ R
Sbjct: 163 -PVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 91/229 (39%), Gaps = 55/229 (24%)
Query: 7 ATKNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKK------RPGAPTQEFIDEVCFLASI 59
+ +NF IGEG +G VYK + G +VA+KK G P+ I E+ L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKEL 61
Query: 60 QHRNLVTLLGYCQENNLQFLIYEY----------------IPNGSVSIHLYGPSQVSRQK 103
H N+V LL N +L++E+ IP + +L+ Q
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ----LLQG 117
Query: 104 LEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTD 163
L F H RV+H+D K N+L++ + K+AD GL G
Sbjct: 118 LAFCHSH------------------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 159
Query: 164 VAGPSSQVT----ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
VT A EI L + +S D++S G E+V+ R
Sbjct: 160 RTYXHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 91/229 (39%), Gaps = 55/229 (24%)
Query: 7 ATKNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKK------RPGAPTQEFIDEVCFLASI 59
+ +NF IGEG +G VYK + G +VA+KK G P+ I E+ L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKEL 62
Query: 60 QHRNLVTLLGYCQENNLQFLIYEY----------------IPNGSVSIHLYGPSQVSRQK 103
H N+V LL N +L++E+ IP + +L+ Q
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ----LLQG 118
Query: 104 LEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTD 163
L F H RV+H+D K N+L++ + K+AD GL G
Sbjct: 119 LAFCHSH------------------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 160
Query: 164 VAGPSSQVT----ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
VT A EI L + +S D++S G E+V+ R
Sbjct: 161 RTYXHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 91/229 (39%), Gaps = 55/229 (24%)
Query: 7 ATKNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKK------RPGAPTQEFIDEVCFLASI 59
+ +NF IGEG +G VYK + G +VA+KK G P+ I E+ L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKEL 61
Query: 60 QHRNLVTLLGYCQENNLQFLIYEY----------------IPNGSVSIHLYGPSQVSRQK 103
H N+V LL N +L++E+ IP + +L+ Q
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ----LLQG 117
Query: 104 LEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTD 163
L F H RV+H+D K N+L++ + K+AD GL G
Sbjct: 118 LAFCHSH------------------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 159
Query: 164 VAGPSSQVT----ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
VT A EI L + +S D++S G E+V+ R
Sbjct: 160 RTYXHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 90/227 (39%), Gaps = 55/227 (24%)
Query: 9 KNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKK------RPGAPTQEFIDEVCFLASIQH 61
+NF IGEG +G VYK + G +VA+KK G P+ I E+ L + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 61
Query: 62 RNLVTLLGYCQENNLQFLIYEY----------------IPNGSVSIHLYGPSQVSRQKLE 105
N+V LL N +L++E+ IP + +L+ Q L
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ----LLQGLA 117
Query: 106 FKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVA 165
F H RV+H+D K N+L++ + K+AD GL G
Sbjct: 118 FCH------------------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 159
Query: 166 GPSSQVT----ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
VT A EI L + +S D++S G E+V+ R
Sbjct: 160 YTHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 90/227 (39%), Gaps = 55/227 (24%)
Query: 9 KNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKK------RPGAPTQEFIDEVCFLASIQH 61
+NF IGEG +G VYK + G +VA+KK G P+ I E+ L + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 60
Query: 62 RNLVTLLGYCQENNLQFLIYEY----------------IPNGSVSIHLYGPSQVSRQKLE 105
N+V LL N +L++E+ IP + +L+ Q L
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ----LLQGLA 116
Query: 106 FKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVA 165
F H RV+H+D K N+L++ + K+AD GL G
Sbjct: 117 FCH------------------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 158
Query: 166 GPSSQVT----ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
VT A EI L + +S D++S G E+V+ R
Sbjct: 159 YXHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 91/229 (39%), Gaps = 55/229 (24%)
Query: 7 ATKNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKK------RPGAPTQEFIDEVCFLASI 59
+ +NF IGEG +G VYK + G +VA+KK G P+ I E+ L +
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKEL 63
Query: 60 QHRNLVTLLGYCQENNLQFLIYEY----------------IPNGSVSIHLYGPSQVSRQK 103
H N+V LL N +L++E+ IP + +L+ Q
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ----LLQG 119
Query: 104 LEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTD 163
L F H RV+H+D K N+L++ + K+AD GL G
Sbjct: 120 LAFCHSH------------------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 161
Query: 164 VAGPSSQVT----ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
VT A EI L + +S D++S G E+V+ R
Sbjct: 162 RTYXHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 84/207 (40%), Gaps = 21/207 (10%)
Query: 10 NFSDKNLIGEGKFGEVYKGL-LQDGMLVAIK-----KRPGAPTQEFIDEVCFLASIQHRN 63
N+ IG+G F +V + G VA+K + + Q+ EV + + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXX 123
+V L + +L+ EY G V +L ++ ++ K R +
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF- 133
Query: 124 XXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRN---FLGRTDVAGPSSQVTADEIFLAS 180
+VH+D K N+L+D D K+AD G N F + D + A E+F
Sbjct: 134 ------IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGK 187
Query: 181 EVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ + DV+S GV L LVSG
Sbjct: 188 KYD-----GPEVDVWSLGVILYTLVSG 209
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 91/229 (39%), Gaps = 55/229 (24%)
Query: 7 ATKNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKK------RPGAPTQEFIDEVCFLASI 59
+ +NF IGEG +G VYK + G +VA+KK G P+ I E+ L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKEL 61
Query: 60 QHRNLVTLLGYCQENNLQFLIYEY----------------IPNGSVSIHLYGPSQVSRQK 103
H N+V LL N +L++E+ IP + +L+ Q
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ----LLQG 117
Query: 104 LEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTD 163
L F H RV+H+D K N+L++ + K+AD GL G
Sbjct: 118 LAFCHSH------------------RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPV 159
Query: 164 VAGPSSQVT----ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
VT A EI L + +S D++S G E+V+ R
Sbjct: 160 RTYXHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 90/227 (39%), Gaps = 55/227 (24%)
Query: 9 KNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKK------RPGAPTQEFIDEVCFLASIQH 61
+NF IGEG +G VYK + G +VA+KK G P+ I E+ L + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 68
Query: 62 RNLVTLLGYCQENNLQFLIYEY----------------IPNGSVSIHLYGPSQVSRQKLE 105
N+V LL N +L++E+ IP + +L+ Q L
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ----LLQGLA 124
Query: 106 FKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVA 165
F H RV+H+D K N+L++ + K+AD GL G
Sbjct: 125 FCHSH------------------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 166
Query: 166 GPSSQVT----ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
VT A EI L + +S D++S G E+V+ R
Sbjct: 167 YTHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 90/227 (39%), Gaps = 55/227 (24%)
Query: 9 KNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKK------RPGAPTQEFIDEVCFLASIQH 61
+NF IGEG +G VYK + G +VA+KK G P+ I E+ L + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 60
Query: 62 RNLVTLLGYCQENNLQFLIYEY----------------IPNGSVSIHLYGPSQVSRQKLE 105
N+V LL N +L++E+ IP + +L+ Q L
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ----LLQGLA 116
Query: 106 FKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVA 165
F H RV+H+D K N+L++ + K+AD GL G
Sbjct: 117 FCH------------------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 158
Query: 166 GPSSQVT----ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
VT A EI L + +S D++S G E+V+ R
Sbjct: 159 YXHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 90/227 (39%), Gaps = 55/227 (24%)
Query: 9 KNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKK------RPGAPTQEFIDEVCFLASIQH 61
+NF IGEG +G VYK + G +VA+KK G P+ I E+ L + H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 65
Query: 62 RNLVTLLGYCQENNLQFLIYEY----------------IPNGSVSIHLYGPSQVSRQKLE 105
N+V LL N +L++E+ IP + +L+ Q L
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ----LLQGLA 121
Query: 106 FKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVA 165
F H RV+H+D K N+L++ + K+AD GL G
Sbjct: 122 FCHSH------------------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 163
Query: 166 GPSSQVT----ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
VT A EI L + +S D++S G E+V+ R
Sbjct: 164 YTHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 90/227 (39%), Gaps = 55/227 (24%)
Query: 9 KNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKK------RPGAPTQEFIDEVCFLASIQH 61
+NF IGEG +G VYK + G +VA+KK G P+ I E+ L + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 60
Query: 62 RNLVTLLGYCQENNLQFLIYEY----------------IPNGSVSIHLYGPSQVSRQKLE 105
N+V LL N +L++E+ IP + +L+ Q L
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQ----LLQGLA 116
Query: 106 FKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVA 165
F H RV+H+D K N+L++ + K+AD GL G
Sbjct: 117 FCH------------------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 158
Query: 166 GPSSQVT----ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
VT A EI L + +S D++S G E+V+ R
Sbjct: 159 YTHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 91/229 (39%), Gaps = 55/229 (24%)
Query: 7 ATKNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKK------RPGAPTQEFIDEVCFLASI 59
+ +NF IGEG +G VYK + G +VA+KK G P+ I E+ L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKEL 60
Query: 60 QHRNLVTLLGYCQENNLQFLIYEY----------------IPNGSVSIHLYGPSQVSRQK 103
H N+V LL N +L++E+ IP + +L+ Q
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ----LLQG 116
Query: 104 LEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTD 163
L F H RV+H+D K N+L++ + K+AD GL G
Sbjct: 117 LAFCH------------------SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPV 158
Query: 164 VAGPSSQVT----ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
VT A EI L + +S D++S G E+V+ R
Sbjct: 159 RTYXHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 32/216 (14%)
Query: 7 ATKNFSDKNLIGEGKFGEVYKGLLQD-GMLVAIKKRPGAPTQEFID-----EVCFLASIQ 60
+ + + + L+GEG +G V K +D G +VAIKK + + + E+ L ++
Sbjct: 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 61 HRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXX 120
H NLV LL C++ +L++E++ + + P+ + Q ++ K+ I
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQ-KYLFQIINGIGFCH 141
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI---- 176
++H+D K N+LV + + K+ D G RT +A P +V DE+
Sbjct: 142 SH------NIIHRDIKPENILVSQSGVVKLCDFG----FART-LAAP-GEVYDDEVATRW 189
Query: 177 -----FLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
L +VK + + DV++ G + E+ G
Sbjct: 190 YRAPELLVGDVK----YGKAVDVWAIGCLVTEMFMG 221
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 91/229 (39%), Gaps = 55/229 (24%)
Query: 7 ATKNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKK------RPGAPTQEFIDEVCFLASI 59
+ +NF IGEG +G VYK + G +VA+KK G P+ I E+ L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKEL 62
Query: 60 QHRNLVTLLGYCQENNLQFLIYEY----------------IPNGSVSIHLYGPSQVSRQK 103
H N+V LL N +L++E+ IP + +L+ Q
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQ----LLQG 118
Query: 104 LEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTD 163
L F H RV+H+D K N+L++ + K+AD GL G
Sbjct: 119 LAFCHSH------------------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 160
Query: 164 VAGPSSQVT----ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
VT A EI L + +S D++S G E+V+ R
Sbjct: 161 RTYXHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 90/227 (39%), Gaps = 55/227 (24%)
Query: 9 KNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKK------RPGAPTQEFIDEVCFLASIQH 61
+NF IGEG +G VYK + G +VA+KK G P+ I E+ L + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA-IREISLLKELNH 62
Query: 62 RNLVTLLGYCQENNLQFLIYEY----------------IPNGSVSIHLYGPSQVSRQKLE 105
N+V LL N +L++E+ IP + +L+ Q L
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ----LLQGLA 118
Query: 106 FKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVA 165
F H RV+H+D K N+L++ + K+AD GL G
Sbjct: 119 FCHSH------------------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 160
Query: 166 GPSSQVT----ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
VT A EI L + +S D++S G E+V+ R
Sbjct: 161 YXHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 17 IGEGKFGEVYKGL---LQDGMLVAI--KKRPGAPTQEFIDEVCFLASIQHRNLVTLLGYC 71
+GEG +GEV + ++ + V I KR + E+C + H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 72 QENNLQFLIYEYIPNGSVSIHL---YGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
+E N+Q+L EY G + + G + Q+ F H+L
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHGIG------- 125
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRF 188
+ H+D K N+L+DE K++D GL + +++ ++A E+ + R F
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 189 -SEKSDVYSFGVFLLELVSG 207
+E DV+S G+ L +++G
Sbjct: 185 HAEPVDVWSCGIVLTAMLAG 204
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 17 IGEGKFGEVYKGL---LQDGMLVAI--KKRPGAPTQEFIDEVCFLASIQHRNLVTLLGYC 71
+GEG +GEV + ++ + V I KR + E+C + H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 72 QENNLQFLIYEYIPNGSVSIHL---YGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
+E N+Q+L EY G + + G + Q+ F H+L
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHGIG------- 124
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRF 188
+ H+D K N+L+DE K++D GL + +++ ++A E+ + R F
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 189 -SEKSDVYSFGVFLLELVSG 207
+E DV+S G+ L +++G
Sbjct: 184 HAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 17 IGEGKFGEV---YKGLLQDGMLVAI--KKRPGAPTQEFIDEVCFLASIQHRNLVTLLGYC 71
+GEG +GEV + ++ + V I KR + E+C + H N+V G+
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 72 QENNLQFLIYEYIPNGSVSIHL---YGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
+E N+Q+L EY G + + G + Q+ F H+L
Sbjct: 73 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHGIG------- 123
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRF 188
+ H+D K N+L+DE K++D GL + +++ ++A E+ + R F
Sbjct: 124 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 182
Query: 189 -SEKSDVYSFGVFLLELVSG 207
+E DV+S G+ L +++G
Sbjct: 183 HAEPVDVWSCGIVLTAMLAG 202
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 17 IGEGKFGEV---YKGLLQDGMLVAI--KKRPGAPTQEFIDEVCFLASIQHRNLVTLLGYC 71
+GEG +GEV + ++ + V I KR + E+C + H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 72 QENNLQFLIYEYIPNGSVSIHL---YGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
+E N+Q+L EY G + + G + Q+ F H+L
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHGIG------- 124
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRF 188
+ H+D K N+L+DE K++D GL + +++ ++A E+ + R F
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 189 -SEKSDVYSFGVFLLELVSG 207
+E DV+S G+ L +++G
Sbjct: 184 HAEPVDVWSCGIVLTAMLAG 203
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 17 IGEGKFGEVYKGL---LQDGMLVAI--KKRPGAPTQEFIDEVCFLASIQHRNLVTLLGYC 71
+GEG +GEV + ++ + V I KR + E+C + H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 72 QENNLQFLIYEYIPNGSVSIHL---YGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
+E N+Q+L EY G + + G + Q+ F H+L
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHGIG------- 125
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRF 188
+ H+D K N+L+DE K++D GL + +++ ++A E+ + R F
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 189 -SEKSDVYSFGVFLLELVSG 207
+E DV+S G+ L +++G
Sbjct: 185 HAEPVDVWSCGIVLTAMLAG 204
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 17 IGEGKFGEVYKGL---LQDGMLVAI--KKRPGAPTQEFIDEVCFLASIQHRNLVTLLGYC 71
+GEG +GEV + ++ + V I KR + E+C + H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 72 QENNLQFLIYEYIPNGSVSIHL---YGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
+E N+Q+L EY G + + G + Q+ F H+L
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHGIG------- 125
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRF 188
+ H+D K N+L+DE K++D GL + +++ ++A E+ + R F
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 189 -SEKSDVYSFGVFLLELVSG 207
+E DV+S G+ L +++G
Sbjct: 185 HAEPVDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 17 IGEGKFGEVYKGL---LQDGMLVAI--KKRPGAPTQEFIDEVCFLASIQHRNLVTLLGYC 71
+GEG +GEV + ++ + V I KR + E+C + H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 72 QENNLQFLIYEYIPNGSVSIHL---YGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
+E N+Q+L EY G + + G + Q+ F H+L
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHGIG------- 125
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRF 188
+ H+D K N+L+DE K++D GL + +++ ++A E+ + R F
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 189 -SEKSDVYSFGVFLLELVSG 207
+E DV+S G+ L +++G
Sbjct: 185 HAEPVDVWSCGIVLTAMLAG 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 17 IGEGKFGEVYKGL---LQDGMLVAI--KKRPGAPTQEFIDEVCFLASIQHRNLVTLLGYC 71
+GEG +GEV + ++ + V I KR + E+C + H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 72 QENNLQFLIYEYIPNGSVSIHL---YGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
+E N+Q+L EY G + + G + Q+ F H+L
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHGIG------- 125
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRF 188
+ H+D K N+L+DE K++D GL + +++ ++A E+ + R F
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 189 -SEKSDVYSFGVFLLELVSG 207
+E DV+S G+ L +++G
Sbjct: 185 HAEPVDVWSCGIVLTAMLAG 204
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 17 IGEGKFGEVYKGL---LQDGMLVAI--KKRPGAPTQEFIDEVCFLASIQHRNLVTLLGYC 71
+GEG +GEV + ++ + V I KR + E+C + H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 72 QENNLQFLIYEYIPNGSVSIHL---YGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
+E N+Q+L EY G + + G + Q+ F H+L
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHGIG------- 124
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRF 188
+ H+D K N+L+DE K++D GL + +++ ++A E+ + R F
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 189 -SEKSDVYSFGVFLLELVSG 207
+E DV+S G+ L +++G
Sbjct: 184 HAEPVDVWSCGIVLTAMLAG 203
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 17 IGEGKFGEVYKGLL-----QDGMLVAIKK-RPGAPTQEFID---EVCFLASIQHRNLVTL 67
+GEG FG+V G VA+K +P + D E+ L ++ H N+V
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 68 LGYCQEN--NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
G C E+ N LI E++P+GS+ +L ++ K+ K +L
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL----PKNKNKINLKQQLKYAVQICKGMDYLGS 132
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE--IFLASEVK 183
+ VH+D NVLV+ + K+ D GL + TD + + D + A E
Sbjct: 133 R--QYVHRDLAARNVLVESEHQVKIGDFGLTKAI-ETDKEXXTVKDDRDSPVFWYAPECL 189
Query: 184 EFRRFSEKSDVYSFGVFLLELVS 206
+F SDV+SFGV L EL++
Sbjct: 190 MQSKFYIASDVWSFGVTLHELLT 212
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 17 IGEGKFGEVYKGLL-----QDGMLVAIKK-RPGAPTQEFID---EVCFLASIQHRNLVTL 67
+GEG FG+V G VA+K +P + D E+ L ++ H N+V
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 68 LGYCQEN--NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
G C E+ N LI E++P+GS+ +L ++ K+ K +L
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYL----PKNKNKINLKQQLKYAVQICKGMDYLGS 144
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE--IFLASEVK 183
+ VH+D NVLV+ + K+ D GL + TD + + D + A E
Sbjct: 145 R--QYVHRDLAARNVLVESEHQVKIGDFGLTKAI-ETDKEXXTVKDDRDSPVFWYAPECL 201
Query: 184 EFRRFSEKSDVYSFGVFLLELVS 206
+F SDV+SFGV L EL++
Sbjct: 202 MQSKFYIASDVWSFGVTLHELLT 224
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 17 IGEGKFGEVYKGL---LQDGMLVAI--KKRPGAPTQEFIDEVCFLASIQHRNLVTLLGYC 71
+GEG +GEV + ++ + V I KR + E+C + H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 72 QENNLQFLIYEYIPNGSVSIHL---YGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
+E N+Q+L EY G + + G + Q+ F H+L
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHGIG------- 124
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRF 188
+ H+D K N+L+DE K++D GL + +++ ++A E+ + R F
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 189 -SEKSDVYSFGVFLLELVSG 207
+E DV+S G+ L +++G
Sbjct: 184 HAEPVDVWSCGIVLTAMLAG 203
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 17 IGEGKFGEVYKGL---LQDGMLVAI--KKRPGAPTQEFIDEVCFLASIQHRNLVTLLGYC 71
+GEG +GEV + ++ + V I KR + E+C + H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 72 QENNLQFLIYEYIPNGSVSIHL---YGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
+E N+Q+L EY G + + G + Q+ F H+L
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHGIG------- 124
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRF 188
+ H+D K N+L+DE K++D GL + +++ ++A E+ + R F
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 189 -SEKSDVYSFGVFLLELVSG 207
+E DV+S G+ L +++G
Sbjct: 184 HAEPVDVWSCGIVLTAMLAG 203
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 17 IGEGKFGEVYKGL---LQDGMLVAI--KKRPGAPTQEFIDEVCFLASIQHRNLVTLLGYC 71
+GEG +GEV + ++ + V I KR + E+C + H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 72 QENNLQFLIYEYIPNGSVSIHL---YGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
+E N+Q+L EY G + + G + Q+ F H+L
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHGIG------- 124
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRF 188
+ H+D K N+L+DE K++D GL + +++ ++A E+ + R F
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 189 -SEKSDVYSFGVFLLELVSG 207
+E DV+S G+ L +++G
Sbjct: 184 HAEPVDVWSCGIVLTAMLAG 203
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 17 IGEGKFGEV---YKGLLQDGMLVAI--KKRPGAPTQEFIDEVCFLASIQHRNLVTLLGYC 71
+GEG +GEV + ++ + V I KR + E+C + H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 72 QENNLQFLIYEYIPNGSVSIHL---YGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
+E N+Q+L EY G + + G + Q+ F H+L
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHGIG------- 125
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRF 188
+ H+D K N+L+DE K++D GL + +++ ++A E+ + R F
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 189 -SEKSDVYSFGVFLLELVSG 207
+E DV+S G+ L +++G
Sbjct: 185 HAEPVDVWSCGIVLTAMLAG 204
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 17 IGEGKFGEV---YKGLLQDGMLVAI--KKRPGAPTQEFIDEVCFLASIQHRNLVTLLGYC 71
+GEG +GEV + ++ + V I KR + E+C + H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 72 QENNLQFLIYEYIPNGSVSIHL---YGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
+E N+Q+L EY G + + G + Q+ F H+L
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHGIG------- 124
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRF 188
+ H+D K N+L+DE K++D GL + +++ ++A E+ + R F
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 189 -SEKSDVYSFGVFLLELVSG 207
+E DV+S G+ L +++G
Sbjct: 184 HAEPVDVWSCGIVLTAMLAG 203
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 119/292 (40%), Gaps = 41/292 (14%)
Query: 17 IGEGKFGEVYKGLLQD-----GMLVAIK--KRPGAPTQE--FIDEVCFLASIQHRNLVTL 67
+GEG FG+V G +VA+K K P + E+ L ++ H +++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 68 LGYCQEN---NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXX 124
G C++ +LQ L+ EY+P GS+ +L S Q L F ++
Sbjct: 99 KGCCEDAGAASLQ-LVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQIC--------EGMAY 149
Query: 125 XXXPRVVHKDFKTANVLVDEDFIAKVADAGLRN--------FLGRTDVAGPSSQVTADEI 176
+H+D NVL+D D + K+ D GL + R D P
Sbjct: 150 LHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPV-------F 202
Query: 177 FLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLL 236
+ A E + +F SDV+SFGV L EL++ ++ + + Q L
Sbjct: 203 WYAPECLKEYKFYYASDVWSFGVTLYELLTHCDS-SQSPPTKFLELIGIAQGQMTVLRLT 261
Query: 237 KILD--ERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLDK 286
++L+ ERL ++ E L+ C + + RP+ +++ L +K
Sbjct: 262 ELLERGERL--PRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEK 311
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 17 IGEGKFGEV---YKGLLQDGMLVAI--KKRPGAPTQEFIDEVCFLASIQHRNLVTLLGYC 71
+GEG +GEV + ++ + V I KR + E+C + H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 72 QENNLQFLIYEYIPNGSVSIHL---YGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
+E N+Q+L EY G + + G + Q+ F H+L
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHGIG------- 124
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRF 188
+ H+D K N+L+DE K++D GL + +++ ++A E+ + R F
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 189 -SEKSDVYSFGVFLLELVSG 207
+E DV+S G+ L +++G
Sbjct: 184 HAEPVDVWSCGIVLTAMLAG 203
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 17 IGEGKFGEV---YKGLLQDGMLVAI--KKRPGAPTQEFIDEVCFLASIQHRNLVTLLGYC 71
+GEG +GEV + ++ + V I KR + E+C + H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 72 QENNLQFLIYEYIPNGSVSIHL---YGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
+E N+Q+L EY G + + G + Q+ F H+L
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHGIG------- 124
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRF 188
+ H+D K N+L+DE K++D GL + +++ ++A E+ + R F
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 189 -SEKSDVYSFGVFLLELVSG 207
+E DV+S G+ L +++G
Sbjct: 184 HAEPVDVWSCGIVLTAMLAG 203
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 84/207 (40%), Gaps = 21/207 (10%)
Query: 10 NFSDKNLIGEGKFGEVYKGL-LQDGMLVAIK-----KRPGAPTQEFIDEVCFLASIQHRN 63
N+ IG+G F +V + G VA++ + + Q+ EV + + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXX 123
+V L + +L+ EY G V +L ++ ++ K R +
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF- 133
Query: 124 XXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRN---FLGRTDVAGPSSQVTADEIFLAS 180
+VH+D K N+L+D D K+AD G N F + D S A E+F
Sbjct: 134 ------IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGK 187
Query: 181 EVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ + DV+S GV L LVSG
Sbjct: 188 KYD-----GPEVDVWSLGVILYTLVSG 209
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 114/281 (40%), Gaps = 28/281 (9%)
Query: 17 IGEGKFGEV----YKGLLQD-GMLVAIKK-RPGAPTQE--FIDEVCFLASIQHRNLVTLL 68
+G+G FG V Y L + G LVA+K+ + P Q+ F E+ L ++ +V
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 69 G--YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXX 126
G Y L+ EY+P+G + L Q R +L+ RL +
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFL----QRHRARLD-ASRLLLYSSQICKGMEYLGS 133
Query: 127 XPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFL-ASEVKEF 185
R VH+D N+LV+ + K+AD GL L + IF A E
Sbjct: 134 R-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSD 192
Query: 186 RRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLK-----ILD 240
FS +SDV+SFGV L EL + + ++ RD L +
Sbjct: 193 NIFSRQSDVWSFGVVLYELFT----YCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEG 248
Query: 241 ERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELD 281
+RL + E +L+ C PS + RPS S + +LD
Sbjct: 249 QRLPAPPACPA--EVHELMKLCWAPSPQDRPSFSALGPQLD 287
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 112/281 (39%), Gaps = 28/281 (9%)
Query: 17 IGEGKFGEV----YKGLLQD-GMLVAIKK-RPGAPTQE--FIDEVCFLASIQHRNLVTLL 68
+G+G FG V Y L + G LVA+K+ + P Q+ F E+ L ++ +V
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 69 G--YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXX 126
G Y L+ EY+P+G + L Q R +L+ L
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFL----QRHRARLDASRLLLYSSQICKGMEYLGSR 130
Query: 127 XPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFL-ASEVKEF 185
R VH+D N+LV+ + K+AD GL L + IF A E
Sbjct: 131 --RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSD 188
Query: 186 RRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLK-----ILD 240
FS +SDV+SFGV L EL + + ++ RD L +
Sbjct: 189 NIFSRQSDVWSFGVVLYELFT----YCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEG 244
Query: 241 ERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELD 281
+RL + E +L+ C PS + RPS S + +LD
Sbjct: 245 QRLPAPPACPA--EVHELMKLCWAPSPQDRPSFSALGPQLD 283
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 35/225 (15%)
Query: 10 NFSDKNLIGEGKFGEVYKGL-LQDGMLVAIKK--RPGAPTQEFIDEVCFLASIQH----- 61
+F + ++G+G FG+V K D AIKK + EV LAS+ H
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVR 66
Query: 62 --------RNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIX 113
RN V + ++ + F+ EY NG++ L +++Q+ E+ RL
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTL-YDLIHSENLNQQRDEY-WRL--- 121
Query: 114 XXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRT---------DV 164
++H+D K N+ +DE K+ D GL + R+ ++
Sbjct: 122 -FRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 165 AGPSSQVTA---DEIFLASEVKEFR-RFSEKSDVYSFGVFLLELV 205
G S +T+ +++A+EV + ++EK D+YS G+ E++
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 113/281 (40%), Gaps = 28/281 (9%)
Query: 17 IGEGKFGEV----YKGLLQD-GMLVAIKK-RPGAPTQE--FIDEVCFLASIQHRNLVTLL 68
+G+G FG V Y L + G LVA+K+ + P Q+ F E+ L ++ +V
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 69 G--YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXX 126
G Y L+ EY+P+G + L Q R +L+ L
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFL----QRHRARLDASRLLLYSSQICKGMEYLGSR 133
Query: 127 XPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFL-ASEVKEF 185
R VH+D N+LV+ + K+AD GL L + IF A E
Sbjct: 134 --RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSD 191
Query: 186 RRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLK-----ILD 240
FS +SDV+SFGV L EL + + ++ + RD L +
Sbjct: 192 NIFSRQSDVWSFGVVLYELFT----YCDKSCSPSAEFLRMMGSERDVPALSRLLELLEEG 247
Query: 241 ERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELD 281
+RL + E +L+ C PS + RPS S + +LD
Sbjct: 248 QRLPAPPACPA--EVHELMKLCWAPSPQDRPSFSALGPQLD 286
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 89/227 (39%), Gaps = 55/227 (24%)
Query: 9 KNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKK------RPGAPTQEFIDEVCFLASIQH 61
+NF IGEG +G VYK + G +VA+ K G P+ I E+ L + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTA-IREISLLKELNH 61
Query: 62 RNLVTLLGYCQENNLQFLIYEY----------------IPNGSVSIHLYGPSQVSRQKLE 105
N+V LL N +L++E+ IP + +L+ Q L
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ----LLQGLA 117
Query: 106 FKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVA 165
F H RV+H+D K N+L++ + K+AD GL G
Sbjct: 118 FCH------------------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 159
Query: 166 GPSSQVT----ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
VT A EI L + +S D++S G E+V+ R
Sbjct: 160 YTHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 89/227 (39%), Gaps = 55/227 (24%)
Query: 9 KNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKK------RPGAPTQEFIDEVCFLASIQH 61
+NF IGEG +G VYK + G +VA+ K G P+ I E+ L + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTA-IREISLLKELNH 60
Query: 62 RNLVTLLGYCQENNLQFLIYEY----------------IPNGSVSIHLYGPSQVSRQKLE 105
N+V LL N +L++E+ IP + +L+ Q L
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ----LLQGLA 116
Query: 106 FKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVA 165
F H RV+H+D K N+L++ + K+AD GL G
Sbjct: 117 FCH------------------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 158
Query: 166 GPSSQVT----ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
VT A EI L + +S D++S G E+V+ R
Sbjct: 159 YTHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 119/292 (40%), Gaps = 41/292 (14%)
Query: 17 IGEGKFGEVYKGLLQD-----GMLVAIK--KRPGAPTQE--FIDEVCFLASIQHRNLVTL 67
+GEG FG+V G +VA+K K P + E+ L ++ H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 68 LGYCQ---ENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXX 124
G C+ E +LQ L+ EY+P GS+ +L S Q L F ++
Sbjct: 82 KGCCEDQGEKSLQ-LVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQIC--------EGMAY 132
Query: 125 XXXPRVVHKDFKTANVLVDEDFIAKVADAGLRN--------FLGRTDVAGPSSQVTADEI 176
+H++ NVL+D D + K+ D GL + R D P
Sbjct: 133 LHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV-------F 185
Query: 177 FLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLL 236
+ A E + +F SDV+SFGV L EL++ ++ + + Q L
Sbjct: 186 WYAPECLKEYKFYYASDVWSFGVTLYELLTHCDS-SQSPPTKFLELIGIAQGQMTVLRLT 244
Query: 237 KILD--ERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLDK 286
++L+ ERL ++ E L+ C + + RP+ +++ L +K
Sbjct: 245 ELLERGERL--PRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEK 294
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 85/207 (41%), Gaps = 22/207 (10%)
Query: 11 FSDKNLIGEGKFGEVYKGLLQ------DGMLVAIKKRPGAPT--QEFIDEVCFLASIQHR 62
DK L G G FG V KG Q + +K P E + E + + +
Sbjct: 14 LEDKEL-GSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNP 72
Query: 63 NLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVS-RQKLEFKHRLSIXXXXXXXXX 121
+V ++G C+ + L+ E G ++ +L V + +E H++S+
Sbjct: 73 YIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES- 130
Query: 122 XXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI--FLA 179
VH+D NVL+ AK++D GL L R D +Q + A
Sbjct: 131 -------NFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENXYKAQTHGKWPVKWYA 182
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVS 206
E + +FS KSDV+SFGV + E S
Sbjct: 183 PECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQ----------EFIDEVCFLASIQHRNLVT 66
+G+G FG VY+G +D + + R T EF++E + ++V
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 67 LLGYCQENNLQFLIYEYIPNGSVSIHLY-----GPSQVSRQKLEFKHRLSIXXXXXXXXX 121
LLG + ++ E + +G + +L + R + + +
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 122 XXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASE 181
+ VH+D N +V DF K+ D G+ + TD + ++A E
Sbjct: 142 YLNAK--KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPE 199
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVS 206
+ F+ SD++SFGV L E+ S
Sbjct: 200 SLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 112/281 (39%), Gaps = 28/281 (9%)
Query: 17 IGEGKFGEV----YKGLLQD-GMLVAIKK-RPGAPTQE--FIDEVCFLASIQHRNLVTLL 68
+G+G FG V Y L + G LVA+K+ + P Q+ F E+ L ++ +V
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 69 G--YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXX 126
G Y L+ EY+P+G + L Q R +L+ L
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFL----QRHRARLDASRLLLYSSQICKGMEYLGSR 146
Query: 127 XPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFL-ASEVKEF 185
R VH+D N+LV+ + K+AD GL L + IF A E
Sbjct: 147 --RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSD 204
Query: 186 RRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLK-----ILD 240
FS +SDV+SFGV L EL + + ++ RD L +
Sbjct: 205 NIFSRQSDVWSFGVVLYELFT----YCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEG 260
Query: 241 ERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELD 281
+RL + E +L+ C PS + RPS S + +LD
Sbjct: 261 QRLPAPPACPA--EVHELMKLCWAPSPQDRPSFSALGPQLD 299
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQ----------EFIDEVCFLASIQHRNLVT 66
+G+G FG VY+G +D + + R T EF++E + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 67 LLGYCQENNLQFLIYEYIPNGSVSIHLY-----GPSQVSRQKLEFKHRLSIXXXXXXXXX 121
LLG + ++ E + +G + +L + R + + +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 122 XXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASE 181
+ VH+D N +V DF K+ D G+ + TD + ++A E
Sbjct: 145 YLNAK--KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPE 202
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVS 206
+ F+ SD++SFGV L E+ S
Sbjct: 203 SLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 119/292 (40%), Gaps = 41/292 (14%)
Query: 17 IGEGKFGEVYKGLLQD-----GMLVAIK--KRPGAPTQE--FIDEVCFLASIQHRNLVTL 67
+GEG FG+V G +VA+K K P + E+ L ++ H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 68 LGYCQ---ENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXX 124
G C+ E +LQ L+ EY+P GS+ +L S Q L F ++
Sbjct: 82 KGCCEDQGEKSLQ-LVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQIC--------EGMAY 132
Query: 125 XXXPRVVHKDFKTANVLVDEDFIAKVADAGLRN--------FLGRTDVAGPSSQVTADEI 176
+H++ NVL+D D + K+ D GL + R D P
Sbjct: 133 LHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV-------F 185
Query: 177 FLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLL 236
+ A E + +F SDV+SFGV L EL++ ++ + + Q L
Sbjct: 186 WYAPECLKEYKFYYASDVWSFGVTLYELLTHCDS-SQSPPTKFLELIGIAQGQMTVLRLT 244
Query: 237 KILD--ERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLDK 286
++L+ ERL ++ E L+ C + + RP+ +++ L +K
Sbjct: 245 ELLERGERL--PRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEK 294
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 85/207 (41%), Gaps = 22/207 (10%)
Query: 11 FSDKNLIGEGKFGEVYKGLLQ------DGMLVAIKKRPGAPT--QEFIDEVCFLASIQHR 62
DK L G G FG V KG Q + +K P E + E + + +
Sbjct: 20 LEDKEL-GSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNP 78
Query: 63 NLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVS-RQKLEFKHRLSIXXXXXXXXX 121
+V ++G C+ + L+ E G ++ +L V + +E H++S+
Sbjct: 79 YIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES- 136
Query: 122 XXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI--FLA 179
VH+D NVL+ AK++D GL L R D +Q + A
Sbjct: 137 -------NFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHGKWPVKWYA 188
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVS 206
E + +FS KSDV+SFGV + E S
Sbjct: 189 PECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQ----------EFIDEVCFLASIQHRNLVT 66
+G+G FG VY+G +D + + R T EF++E + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 67 LLGYCQENNLQFLIYEYIPNGSVSIHLY-----GPSQVSRQKLEFKHRLSIXXXXXXXXX 121
LLG + ++ E + +G + +L + R + + +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 122 XXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASE 181
+ VH+D N +V DF K+ D G+ + TD + ++A E
Sbjct: 145 YLNAK--KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPE 202
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVS 206
+ F+ SD++SFGV L E+ S
Sbjct: 203 SLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 19/200 (9%)
Query: 17 IGEGKFGEV---YKGLLQDGMLVAI--KKRPGAPTQEFIDEVCFLASIQHRNLVTLLGYC 71
+GEG GEV + ++ + V I KR + E+C + H N+V G+
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 72 QENNLQFLIYEYIPNGSVSIHL---YGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
+E N+Q+L EY G + + G + Q+ F H+L
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHGIG------- 124
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRF 188
+ H+D K N+L+DE K++D GL + +++ ++A E+ + R F
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 189 -SEKSDVYSFGVFLLELVSG 207
+E DV+S G+ L +++G
Sbjct: 184 HAEPVDVWSCGIVLTAMLAG 203
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 85/207 (41%), Gaps = 22/207 (10%)
Query: 11 FSDKNLIGEGKFGEVYKGLLQ------DGMLVAIKKRPGAPT--QEFIDEVCFLASIQHR 62
DK L G G FG V KG Q + +K P E + E + + +
Sbjct: 8 LEDKEL-GSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNP 66
Query: 63 NLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVS-RQKLEFKHRLSIXXXXXXXXX 121
+V ++G C+ + L+ E G ++ +L V + +E H++S+
Sbjct: 67 YIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES- 124
Query: 122 XXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI--FLA 179
VH+D NVL+ AK++D GL L R D +Q + A
Sbjct: 125 -------NFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHGKWPVKWYA 176
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVS 206
E + +FS KSDV+SFGV + E S
Sbjct: 177 PECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 85/207 (41%), Gaps = 22/207 (10%)
Query: 11 FSDKNLIGEGKFGEVYKGLLQ------DGMLVAIKKRPGAPT--QEFIDEVCFLASIQHR 62
DK L G G FG V KG Q + +K P E + E + + +
Sbjct: 30 LEDKEL-GSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNP 88
Query: 63 NLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVS-RQKLEFKHRLSIXXXXXXXXX 121
+V ++G C+ + L+ E G ++ +L V + +E H++S+
Sbjct: 89 YIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES- 146
Query: 122 XXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI--FLA 179
VH+D NVL+ AK++D GL L R D +Q + A
Sbjct: 147 -------NFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHGKWPVKWYA 198
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVS 206
E + +FS KSDV+SFGV + E S
Sbjct: 199 PECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 85/207 (41%), Gaps = 22/207 (10%)
Query: 11 FSDKNLIGEGKFGEVYKGLLQ------DGMLVAIKKRPGAPT--QEFIDEVCFLASIQHR 62
DK L G G FG V KG Q + +K P E + E + + +
Sbjct: 30 LEDKEL-GSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNP 88
Query: 63 NLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVS-RQKLEFKHRLSIXXXXXXXXX 121
+V ++G C+ + L+ E G ++ +L V + +E H++S+
Sbjct: 89 YIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES- 146
Query: 122 XXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI--FLA 179
VH+D NVL+ AK++D GL L R D +Q + A
Sbjct: 147 -------NFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHGKWPVKWYA 198
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVS 206
E + +FS KSDV+SFGV + E S
Sbjct: 199 PECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 85/205 (41%), Gaps = 22/205 (10%)
Query: 13 DKNLIGEGKFGEVYKGLLQ------DGMLVAIKKRPGAPT--QEFIDEVCFLASIQHRNL 64
DK L G G FG V KG Q + +K P E + E + + + +
Sbjct: 12 DKEL-GSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70
Query: 65 VTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVS-RQKLEFKHRLSIXXXXXXXXXXX 123
V ++G C+ + L+ E G ++ +L V + +E H++S+
Sbjct: 71 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES--- 126
Query: 124 XXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI--FLASE 181
VH+D NVL+ AK++D GL L R D +Q + A E
Sbjct: 127 -----NFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHGKWPVKWYAPE 180
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVS 206
+ +FS KSDV+SFGV + E S
Sbjct: 181 CINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 85/205 (41%), Gaps = 22/205 (10%)
Query: 13 DKNLIGEGKFGEVYKGLLQ------DGMLVAIKKRPGAPT--QEFIDEVCFLASIQHRNL 64
DK L G G FG V KG Q + +K P E + E + + + +
Sbjct: 16 DKEL-GSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 65 VTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVS-RQKLEFKHRLSIXXXXXXXXXXX 123
V ++G C+ + L+ E G ++ +L V + +E H++S+
Sbjct: 75 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES--- 130
Query: 124 XXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI--FLASE 181
VH+D NVL+ AK++D GL L R D +Q + A E
Sbjct: 131 -----NFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHGKWPVKWYAPE 184
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVS 206
+ +FS KSDV+SFGV + E S
Sbjct: 185 CINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 85/207 (41%), Gaps = 22/207 (10%)
Query: 11 FSDKNLIGEGKFGEVYKGLLQ------DGMLVAIKKRPGAPT--QEFIDEVCFLASIQHR 62
DK L G G FG V KG Q + +K P E + E + + +
Sbjct: 28 LEDKEL-GSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNP 86
Query: 63 NLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVS-RQKLEFKHRLSIXXXXXXXXX 121
+V ++G C+ + L+ E G ++ +L V + +E H++S+
Sbjct: 87 YIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES- 144
Query: 122 XXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI--FLA 179
VH+D NVL+ AK++D GL L R D +Q + A
Sbjct: 145 -------NFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHGKWPVKWYA 196
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVS 206
E + +FS KSDV+SFGV + E S
Sbjct: 197 PECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 85/205 (41%), Gaps = 22/205 (10%)
Query: 13 DKNLIGEGKFGEVYKGLLQ------DGMLVAIKKRPGAPT--QEFIDEVCFLASIQHRNL 64
DK L G G FG V KG Q + +K P E + E + + + +
Sbjct: 374 DKEL-GSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 432
Query: 65 VTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXXXXXXX 123
V ++G C+ + L+ E G ++ +L V + + E H++S+
Sbjct: 433 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES--- 488
Query: 124 XXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI--FLASE 181
VH+D NVL+ AK++D GL L R D +Q + A E
Sbjct: 489 -----NFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHGKWPVKWYAPE 542
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVS 206
+ +FS KSDV+SFGV + E S
Sbjct: 543 CINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 85/205 (41%), Gaps = 22/205 (10%)
Query: 13 DKNLIGEGKFGEVYKGLLQ------DGMLVAIKKRPGAPT--QEFIDEVCFLASIQHRNL 64
DK L G G FG V KG Q + +K P E + E + + + +
Sbjct: 375 DKEL-GSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 433
Query: 65 VTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXXXXXXX 123
V ++G C+ + L+ E G ++ +L V + + E H++S+
Sbjct: 434 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES--- 489
Query: 124 XXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI--FLASE 181
VH+D NVL+ AK++D GL L R D +Q + A E
Sbjct: 490 -----NFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHGKWPVKWYAPE 543
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVS 206
+ +FS KSDV+SFGV + E S
Sbjct: 544 CINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 80/200 (40%), Gaps = 21/200 (10%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIK-----KRPGAPTQEFIDEVCFLASIQHRNLVTLLGY 70
IG+G F +V + G VA+K + + Q+ EV + H N+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 71 CQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV 130
+ +L+ EY G V +L + ++ K R + +
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKF-------I 134
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLRN---FLGRTDVAGPSSQVTADEIFLASEVKEFRR 187
VH+D K N+L+D D K+AD G N F + D + A E+F +
Sbjct: 135 VHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYD---- 190
Query: 188 FSEKSDVYSFGVFLLELVSG 207
+ DV+S GV L LVSG
Sbjct: 191 -GPEVDVWSLGVILYTLVSG 209
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 79/205 (38%), Gaps = 30/205 (14%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKK------RPGAPTQEFIDEVCFLASIQHRNLVTLLG 69
+GEG +GEVYK + VAIK+ G P I EV L +QHRN++ L
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTA-IREVSLLKELQHRNIIELKS 100
Query: 70 YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPR 129
N+ LI+EY N P R F ++L R
Sbjct: 101 VIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQL--------INGVNFCHSRR 152
Query: 130 VVHKDFKTANVLV-----DEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKE 184
+H+D K N+L+ E + K+ D GL G P Q T + I L E
Sbjct: 153 CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGI-----PIRQFTHEIITLWYRPPE 207
Query: 185 F----RRFSEKSDVYSFGVFLLELV 205
R +S D++S E++
Sbjct: 208 ILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 15/202 (7%)
Query: 11 FSDKNLIGEGKFGEVYKGLLQDGM-LVAIK----KRPGAPTQEFIDEVCFLASIQHRNLV 65
F+ + IG+G FGEVYKG+ +VAIK + ++ E+ L+ +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 66 TLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
G ++ ++I EY+ GS ++ L P + + R +
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGS-ALDLLKPGPLEETYIATILREILKGLDYLHSE---- 135
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEF 185
R +H+D K ANVL+ E K+AD G+ L TD + ++A EV +
Sbjct: 136 ---RKIHRDIKAANVLLSEQGDVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVIKQ 190
Query: 186 RRFSEKSDVYSFGVFLLELVSG 207
+ K+D++S G+ +EL G
Sbjct: 191 SAYDFKADIWSLGITAIELAKG 212
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 127/309 (41%), Gaps = 35/309 (11%)
Query: 1 MEELSLATKNFSDKNLIGEGKFGEVYKGLL--QDGMLVAIKKR-------PGAPTQEFID 51
+E++ + + F+ ++G+G+FG V + L +DG V + + + +EF+
Sbjct: 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR 74
Query: 52 EVCFLASIQHRNLVTLLGYCQENN------LQFLIYEYIPNGSVSIHLYGPSQVSRQKLE 105
E + H ++ L+G + + +I ++ +G + L S++
Sbjct: 75 EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLA-SRIGENPFN 133
Query: 106 FKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL--RNFLGRTD 163
+ + +H+D N ++ ED VAD GL + + G
Sbjct: 134 LPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYY 193
Query: 164 VAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXV 223
G +S++ +LA E ++ SDV++FGV + E+++ +
Sbjct: 194 RQGCASKLPVK--WLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAG--------- 242
Query: 224 ELVQNSRDFSNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRT 283
++N+ ++ L I RL E MEE L+ +C ++RPS + + EL+
Sbjct: 243 --IENAEIYNYL--IGGNRL--KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENI 296
Query: 284 LDKEMNLTT 292
L L+T
Sbjct: 297 LGHLSVLST 305
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQ----------EFIDEVCFLASIQHRNLVT 66
+G+G FG VY+G +D + + R T EF++E + ++V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 67 LLGYCQENNLQFLIYEYIPNGSVSIHLY-----GPSQVSRQKLEFKHRLSIXXXXXXXXX 121
LLG + ++ E + +G + +L + R + + +
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 122 XXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASE 181
+ VH+D N +V DF K+ D G+ + TD + ++A E
Sbjct: 144 YLNAK--KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPE 201
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVS 206
+ F+ SD++SFGV L E+ S
Sbjct: 202 SLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 16 LIGEGKFGEVYKGL-LQDGMLVAIK--KRPGAPTQEFIDEVCFLASI-QHRNLVTLLGYC 71
L+G G +G+VYKG ++ G L AIK G +E E+ L HRN+ T G
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAF 90
Query: 72 QENNLQ------FLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
+ N +L+ E+ GSV+ L ++ + K E+ +
Sbjct: 91 IKKNPPGMDDQLWLVMEFCGAGSVT-DLIKNTKGNTLKEEWIAYIC----REILRGLSHL 145
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEV--- 182
+V+H+D K NVL+ E+ K+ D G+ L RT G + ++A EV
Sbjct: 146 HQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT--VGRRNTFIGTPYWMAPEVIAC 203
Query: 183 --KEFRRFSEKSDVYSFGVFLLELVSG 207
+ KSD++S G+ +E+ G
Sbjct: 204 DENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQ----------EFIDEVCFLASIQHRNLVT 66
+G+G FG VY+G +D + + R T EF++E + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 67 LLGYCQENNLQFLIYEYIPNGSVSIHLY-----GPSQVSRQKLEFKHRLSIXXXXXXXXX 121
LLG + ++ E + +G + +L + R + + +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 122 XXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASE 181
+ VH+D N +V DF K+ D G+ + TD + ++A E
Sbjct: 145 YLNAK--KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPE 202
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVS 206
+ F+ SD++SFGV L E+ S
Sbjct: 203 SLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 3 ELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQEFIDE--VCFLASIQ 60
E SL N LIG G++G VYKG L D VA+K A Q FI+E + + ++
Sbjct: 7 EPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRVPLME 65
Query: 61 HRNLVTLL----GYCQENNLQF-LIYEYIPNGSVS--IHLYGPSQVSRQKLEFKHRLSIX 113
H N+ + + +++ L+ EY PNGS+ + L+ VS +L +
Sbjct: 66 HDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGL- 124
Query: 114 XXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTA 173
P + H+D + NVLV D ++D GL L + P + A
Sbjct: 125 AYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNA 184
Query: 174 --DEI----FLASEV-------KEFRRFSEKSDVYSFGVFLLEL 204
E+ ++A EV ++ ++ D+Y+ G+ E+
Sbjct: 185 AISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 22/214 (10%)
Query: 7 ATKNFSDKNLIGEGKFGEVYKGLLQD-GMLVAIKK-----RPGAPTQEFIDEVCFLASIQ 60
++ F +G G + VYKGL + G+ VA+K+ G P+ I E+ + ++
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTA-IREISLMKELK 61
Query: 61 HRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQ-VSRQKLEFKHRLSIXXXXXXX 119
H N+V L N L++E++ N + Y S+ V + L
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDN---DLKKYMDSRTVGNTPRGLELNLVKYFQWQLL 118
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT-----AD 174
+++H+D K N+L+++ K+ D GL G V SS+V A
Sbjct: 119 QGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG-IPVNTFSSEVVTLWYRAP 177
Query: 175 EIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
++ + S R +S D++S G L E+++G+
Sbjct: 178 DVLMGS-----RTYSTSIDIWSCGCILAEMITGK 206
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 94/222 (42%), Gaps = 31/222 (13%)
Query: 5 SLAT------KNFSDKNLIGEGKFGEVYKG-LLQDGMLVAIKK------RPGAPTQEFID 51
SLAT ++F NL+G+G F VY+ + G+ VAIK Q +
Sbjct: 1 SLATCIGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQN 60
Query: 52 EVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQ--VSRQKLEFKHR 109
EV ++H +++ L Y +++N +L+ E NG ++ +L + + F H+
Sbjct: 61 EVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQ 120
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSS 169
+ ++H+D +N+L+ + K+AD GL T + P
Sbjct: 121 IITGMLYLHSHG--------ILHRDLTLSNLLLTRNMNIKIADFGL-----ATQLKMPHE 167
Query: 170 Q---VTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
+ + +++ E+ +SDV+S G L+ GR
Sbjct: 168 KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGR 209
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 90/204 (44%), Gaps = 21/204 (10%)
Query: 17 IGEGKFGEVYKGLL----QDGMLVAIK-----KRPGAPTQEFIDEVCFLASIQHRNLVTL 67
IGEG FG K +L +DG IK + +E EV LA+++H N+V
Sbjct: 32 IGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQY 88
Query: 68 LGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQK-LEFKHRLSIXXXXXXXXXXXXXX 126
+EN +++ +Y G + +++ QK + F+ +
Sbjct: 89 RESFEENGSLYIVMDYCEGGDLF------KRINAQKGVLFQEDQILDWFVQICLALKHVH 142
Query: 127 XPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFR 186
+++H+D K+ N+ + +D ++ D G+ L T + +L+ E+ E +
Sbjct: 143 DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST--VELARACIGTPYYLSPEICENK 200
Query: 187 RFSEKSDVYSFGVFLLELVSGREA 210
++ KSD+++ G L EL + + A
Sbjct: 201 PYNNKSDIWALGCVLYELCTLKHA 224
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 97/225 (43%), Gaps = 35/225 (15%)
Query: 10 NFSDKNLIGEGKFGEVYKGL-LQDGMLVAIKK--RPGAPTQEFIDEVCFLASIQH----- 61
+F + ++G+G FG+V K D AIKK + EV LAS+ H
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVR 66
Query: 62 --------RNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIX 113
RN V + ++ + F+ EY N ++ L +++Q+ E+ RL
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTL-YDLIHSENLNQQRDEY-WRL--- 121
Query: 114 XXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRT---------DV 164
++H+D K N+ +DE K+ D GL + R+ ++
Sbjct: 122 -FRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 165 AGPSSQVTA---DEIFLASEVKEFR-RFSEKSDVYSFGVFLLELV 205
G S +T+ +++A+EV + ++EK D+YS G+ E++
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 36/214 (16%)
Query: 9 KNFSDKNLIGEGKFGEVYKGL-LQDGMLVAIKKR--PGAPTQEFI-DEVCFLASIQHRNL 64
K ++ IG+G G VY + + G VAI++ P +E I +E+ + ++ N+
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 65 VTLLGYCQENNLQFLIYEYIPNGS----VSIHLYGPSQVSR------QKLEFKHRLSIXX 114
V L + +++ EY+ GS V+ Q++ Q LEF H
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH------ 133
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGR-TDVAGPSSQVTA 173
+V+H+D K+ N+L+ D K+ D G F + T S++
Sbjct: 134 ------------SNQVIHRDIKSDNILLGMDGSVKLTDFG---FCAQITPEQSKRSEMVG 178
Query: 174 DEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
++A EV + + K D++S G+ +E++ G
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 19/200 (9%)
Query: 17 IGEGKFGEV---YKGLLQDGMLVAI--KKRPGAPTQEFIDEVCFLASIQHRNLVTLLGYC 71
+GEG +GEV + ++ + V I KR + E+ + H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 72 QENNLQFLIYEYIPNGSVSIHL---YGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
+E N+Q+L EY G + + G + Q+ F H+L
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHGIG------- 124
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRF 188
+ H+D K N+L+DE K++D GL + +++ ++A E+ + R F
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 189 -SEKSDVYSFGVFLLELVSG 207
+E DV+S G+ L +++G
Sbjct: 184 HAEPVDVWSCGIVLTAMLAG 203
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 19/200 (9%)
Query: 17 IGEGKFGEVYKGL---LQDGMLVAI--KKRPGAPTQEFIDEVCFLASIQHRNLVTLLGYC 71
+GEG +GEV + ++ + V I KR + E+ + H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 72 QENNLQFLIYEYIPNGSVSIHL---YGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
+E N+Q+L EY G + + G + Q+ F H+L
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHGIG------- 125
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRF 188
+ H+D K N+L+DE K++D GL + +++ ++A E+ + R F
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 184
Query: 189 -SEKSDVYSFGVFLLELVSG 207
+E DV+S G+ L +++G
Sbjct: 185 HAEPVDVWSCGIVLTAMLAG 204
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 15/202 (7%)
Query: 11 FSDKNLIGEGKFGEVYKGL-LQDGMLVAIK----KRPGAPTQEFIDEVCFLASIQHRNLV 65
F+ IG+G FGEV+KG+ + +VAIK + ++ E+ L+ +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 66 TLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
G ++ ++I EY+ GS ++ L P + ++ R +
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGS-ALDLLEPGPLDETQIATILREILKGLDYLHSE---- 143
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEF 185
+ +H+D K ANVL+ E K+AD G+ L TD + ++A EV +
Sbjct: 144 ---KKIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNTFVGTPFWMAPEVIKQ 198
Query: 186 RRFSEKSDVYSFGVFLLELVSG 207
+ K+D++S G+ +EL G
Sbjct: 199 SAYDSKADIWSLGITAIELARG 220
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 120/295 (40%), Gaps = 47/295 (15%)
Query: 17 IGEGKFGEVYKGLLQD-----GMLVAIKK-RPGAPTQ---EFIDEVCFLASIQHRNLVTL 67
+GEG FG+V G +VA+K + G Q + E+ L ++ H ++V
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 68 LGYCQ---ENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXX 124
G C+ E ++Q L+ EY+P GS+ +L Q L F ++
Sbjct: 77 KGCCEDQGEKSVQ-LVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQIC--------EGMAY 127
Query: 125 XXXPRVVHKDFKTANVLVDEDFIAKVADAGLRN--------FLGRTDVAGPSSQVTADEI 176
+H+ NVL+D D + K+ D GL + R D P
Sbjct: 128 LHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV-------F 180
Query: 177 FLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLL 236
+ A E + +F SDV+SFGV L EL++ ++ EL+ +++ +L
Sbjct: 181 WYAPECLKECKFYYASDVWSFGVTLYELLTYCDS----NQSPHTKFTELIGHTQGQMTVL 236
Query: 237 KILD-----ERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLDK 286
++ + ERL + E L+ C + + RP+ ++V L +K
Sbjct: 237 RLTELLERGERL--PRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQEK 289
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 15/202 (7%)
Query: 11 FSDKNLIGEGKFGEVYKGL-LQDGMLVAIK----KRPGAPTQEFIDEVCFLASIQHRNLV 65
F+ IG+G FGEV+KG+ + +VAIK + ++ E+ L+ +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 66 TLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
G ++ ++I EY+ GS ++ L P + ++ R +
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGS-ALDLLEPGPLDETQIATILREILKGLDYLHSE---- 138
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEF 185
+ +H+D K ANVL+ E K+AD G+ L TD + ++A EV +
Sbjct: 139 ---KKIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVIKQ 193
Query: 186 RRFSEKSDVYSFGVFLLELVSG 207
+ K+D++S G+ +EL G
Sbjct: 194 SAYDSKADIWSLGITAIELARG 215
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 120/295 (40%), Gaps = 47/295 (15%)
Query: 17 IGEGKFGEVYKGLLQD-----GMLVAIKK-RPGAPTQ---EFIDEVCFLASIQHRNLVTL 67
+GEG FG+V G +VA+K + G Q + E+ L ++ H ++V
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 68 LGYCQ---ENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXX 124
G C+ E ++Q L+ EY+P GS+ +L Q L F ++
Sbjct: 76 KGCCEDQGEKSVQ-LVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQIC--------EGMAY 126
Query: 125 XXXPRVVHKDFKTANVLVDEDFIAKVADAGLRN--------FLGRTDVAGPSSQVTADEI 176
+H+ NVL+D D + K+ D GL + R D P
Sbjct: 127 LHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV-------F 179
Query: 177 FLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLL 236
+ A E + +F SDV+SFGV L EL++ ++ EL+ +++ +L
Sbjct: 180 WYAPECLKECKFYYASDVWSFGVTLYELLTYCDS----NQSPHTKFTELIGHTQGQMTVL 235
Query: 237 KILD-----ERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLDK 286
++ + ERL + E L+ C + + RP+ ++V L +K
Sbjct: 236 RLTELLERGERL--PRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQEK 288
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 15/202 (7%)
Query: 11 FSDKNLIGEGKFGEVYKGL-LQDGMLVAIK----KRPGAPTQEFIDEVCFLASIQHRNLV 65
F+ IG+G FGEV+KG+ + +VAIK + ++ E+ L+ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 66 TLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
G ++ ++I EY+ GS ++ L P + ++ R +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGS-ALDLLEPGPLDETQIATILREILKGLDYLHSE---- 123
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEF 185
+ +H+D K ANVL+ E K+AD G+ L TD + ++A EV +
Sbjct: 124 ---KKIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNTFVGTPFWMAPEVIKQ 178
Query: 186 RRFSEKSDVYSFGVFLLELVSG 207
+ K+D++S G+ +EL G
Sbjct: 179 SAYDSKADIWSLGITAIELARG 200
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 19/200 (9%)
Query: 17 IGEGKFGEV---YKGLLQDGMLVAI--KKRPGAPTQEFIDEVCFLASIQHRNLVTLLGYC 71
+GEG +GEV + ++ + V I KR + E+ + H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 72 QENNLQFLIYEYIPNGSVSIHL---YGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
+E N+Q+L EY G + + G + Q+ F H+L
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR--FFHQLMAGVVYLHGIG------- 124
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRF 188
+ H+D K N+L+DE K++D GL + +++ ++A E+ + R F
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 189 -SEKSDVYSFGVFLLELVSG 207
+E DV+S G+ L +++G
Sbjct: 184 HAEPVDVWSCGIVLTAMLAG 203
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQ----------EFIDEVCFLASIQHRNLVT 66
+G+G FG VY+G +D + + R T EF++E + ++V
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 67 LLGYCQENNLQFLIYEYIPNGSVSIHLY-----GPSQVSRQKLEFKHRLSIXXXXXXXXX 121
LLG + ++ E + +G + +L + R + + +
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 122 XXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASE 181
+ VH++ N +V DF K+ D G+ + TD + ++A E
Sbjct: 146 YLNAK--KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPE 203
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVS 206
+ F+ SD++SFGV L E+ S
Sbjct: 204 SLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 15/202 (7%)
Query: 11 FSDKNLIGEGKFGEVYKGL-LQDGMLVAIK----KRPGAPTQEFIDEVCFLASIQHRNLV 65
F+ IG+G FGEV+KG+ + +VAIK + ++ E+ L+ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 66 TLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
G ++ ++I EY+ GS ++ L P + ++ R +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGS-ALDLLEPGPLDETQIATILREILKGLDYLHSE---- 123
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEF 185
+ +H+D K ANVL+ E K+AD G+ L TD + ++A EV +
Sbjct: 124 ---KKIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVIKQ 178
Query: 186 RRFSEKSDVYSFGVFLLELVSG 207
+ K+D++S G+ +EL G
Sbjct: 179 SAYDSKADIWSLGITAIELARG 200
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQ----------EFIDEVCFLASIQHRNLVT 66
+G+G FG VY+G +D + + R T EF++E + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 67 LLGYCQENNLQFLIYEYIPNGSVSIHLY-----GPSQVSRQKLEFKHRLSIXXXXXXXXX 121
LLG + ++ E + +G + +L + R + + +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 122 XXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASE 181
+ VH++ N +V DF K+ D G+ + TD + ++A E
Sbjct: 145 YLNAK--KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPE 202
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVS 206
+ F+ SD++SFGV L E+ S
Sbjct: 203 SLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 92/214 (42%), Gaps = 36/214 (16%)
Query: 9 KNFSDKNLIGEGKFGEVYKGL-LQDGMLVAIKKR--PGAPTQEFI-DEVCFLASIQHRNL 64
K ++ IG+G G VY + + G VAI++ P +E I +E+ + ++ N+
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 80
Query: 65 VTLLGYCQENNLQFLIYEYIPNGS----VSIHLYGPSQVSR------QKLEFKHRLSIXX 114
V L + +++ EY+ GS V+ Q++ Q LEF H
Sbjct: 81 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH------ 134
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGR-TDVAGPSSQVTA 173
+V+H+D K+ N+L+ D K+ D G F + T S +
Sbjct: 135 ------------SNQVIHRDIKSDNILLGMDGSVKLTDFG---FCAQITPEQSKRSXMVG 179
Query: 174 DEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
++A EV + + K D++S G+ +E++ G
Sbjct: 180 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 213
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 92/234 (39%), Gaps = 38/234 (16%)
Query: 2 EELSLATKNFSDKNLIGEGKFGEVYKGLL-----QDGML-VAIKK-RPGAPTQE---FID 51
E+ N +G G FG+V + +D +L VA+K + A E +
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 52 EVCFLASI-QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHL-----------YGPSQV 99
E+ ++ + QH N+V LLG C +I EY G + L Y PS
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHN 158
Query: 100 SRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL---- 155
++L + L +H+D NVL+ +AK+ D GL
Sbjct: 159 PEEQLSSRDLLHFSSQVAQGMAFLASK--NCIHRDVAARNVLLTNGHVAKIGDFGLARDI 216
Query: 156 ---RNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
N++ + + P + + IF ++ +SDV+S+G+ L E+ S
Sbjct: 217 MNDSNYIVKGNARLPVKWMAPESIFDCV-------YTVQSDVWSYGILLWEIFS 263
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 92/214 (42%), Gaps = 36/214 (16%)
Query: 9 KNFSDKNLIGEGKFGEVYKGL-LQDGMLVAIKKR--PGAPTQEFI-DEVCFLASIQHRNL 64
K ++ IG+G G VY + + G VAI++ P +E I +E+ + ++ N+
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 65 VTLLGYCQENNLQFLIYEYIPNGS----VSIHLYGPSQVSR------QKLEFKHRLSIXX 114
V L + +++ EY+ GS V+ Q++ Q LEF H
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH------ 133
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGR-TDVAGPSSQVTA 173
+V+H+D K+ N+L+ D K+ D G F + T S +
Sbjct: 134 ------------SNQVIHRDIKSDNILLGMDGSVKLTDFG---FCAQITPEQSKRSXMVG 178
Query: 174 DEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
++A EV + + K D++S G+ +E++ G
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 92/214 (42%), Gaps = 36/214 (16%)
Query: 9 KNFSDKNLIGEGKFGEVYKGL-LQDGMLVAIKKR--PGAPTQEFI-DEVCFLASIQHRNL 64
K ++ IG+G G VY + + G VAI++ P +E I +E+ + ++ N+
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 65 VTLLGYCQENNLQFLIYEYIPNGS----VSIHLYGPSQVSR------QKLEFKHRLSIXX 114
V L + +++ EY+ GS V+ Q++ Q LEF H
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH------ 133
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGR-TDVAGPSSQVTA 173
+V+H+D K+ N+L+ D K+ D G F + T S +
Sbjct: 134 ------------SNQVIHRDIKSDNILLGMDGSVKLTDFG---FCAQITPEQSKRSTMVG 178
Query: 174 DEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
++A EV + + K D++S G+ +E++ G
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 23/206 (11%)
Query: 11 FSDKNLIGEGKFGEVYKGL-LQDGMLVAIK----KRPGAPTQEFIDEVCFLASIQHRNLV 65
F+ IG+G FGEV+KG+ + +VAIK + ++ E+ L+ +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 66 TLLGYCQENNLQFLIYEYIPNGS-VSIHLYGPS---QVSRQKLEFKHRLSIXXXXXXXXX 121
G + + ++I EY+ GS + + GP Q++ E L
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSE----- 139
Query: 122 XXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASE 181
+ +H+D K ANVL+ E K+AD G+ L TD + ++A E
Sbjct: 140 -------KKIHRDIKAANVLLSEQGDVKLADFGVAGQL--TDTQIKRNTFVGTPFWMAPE 190
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVSG 207
V + + K+D++S G+ +EL G
Sbjct: 191 VIQQSAYDSKADIWSLGITAIELAKG 216
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 120/297 (40%), Gaps = 51/297 (17%)
Query: 17 IGEGKFGEVYK----GLLQDGML--VAIKK-RPGAPTQE---FIDEVCFLASIQHR-NLV 65
+G G FG+V + G+ + VA+K + GA E + E+ L I H N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 66 TLLGYC-QENNLQFLIYEYIPNGSVSIHL------YGPSQVSRQKLEFKHRLS----IXX 114
LLG C + +I E+ G++S +L + P +V+ + L +K L+ I
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDL-YKDFLTLEHLICY 190
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLR-------NFLGRTDVAGP 167
+ +H+D N+L+ E + K+ D GL +++ + D P
Sbjct: 191 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 250
Query: 168 SSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQ 227
+ + IF R ++ +SDV+SFGV L E+ S V+
Sbjct: 251 LKWMAPETIF-------DRVYTIQSDVWSFGVLLWEIFS-----------LGASPYPGVK 292
Query: 228 NSRDFSNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
+F LK +T E Q ++ C +RP+ S++V L L
Sbjct: 293 IDEEFCRRLKEGTRMRAPDYTT---PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 346
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 112/289 (38%), Gaps = 37/289 (12%)
Query: 17 IGEGKFGEVYK----GLLQDGML--VAIKK-RPGAPTQE---FIDEVCFLASIQHR-NLV 65
+G G FG+V + G+ + VA+K + GA E + E+ L I H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 66 TLLGYCQENNLQFL-IYEYIPNGSVSIHL---------YGPSQVSRQKLEFKHRLSIXXX 115
LLG C + + I E+ G++S +L Y P + + L +H +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
+ +H+D N+L+ E + K+ D GL + +
Sbjct: 157 VAKGMEFLASR--KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNL 235
++A E R ++ +SDV+SFGV L E+ S V+ +F
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-----------LGASPYPGVKIDEEFCRR 263
Query: 236 LKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
LK +T E Q ++ C +RP+ S++V L L
Sbjct: 264 LKEGTRMRAPDYTT---PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 49/223 (21%)
Query: 8 TKNFSDKNLIGEGKFGEVYKGLLQD-GMLVAIKKRPGAPTQEFID--------EVCFLAS 58
K + + +GEG+F VYK ++ +VAIKK E D E+ L
Sbjct: 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQE 68
Query: 59 IQHRNLVTLL-GYCQENNLQFLIYEY--------IPNGSVSI---HLYGPSQVSRQKLEF 106
+ H N++ LL + ++N+ L++++ I + S+ + H+ ++ Q LE+
Sbjct: 69 LSHPNIIGLLDAFGHKSNIS-LVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEY 127
Query: 107 KHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAG 166
H+ I +H+D K N+L+DE+ + K+AD GL G + A
Sbjct: 128 LHQHWI------------------LHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAY 169
Query: 167 PSSQVT----ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELV 205
VT A E+ + R + D+++ G L EL+
Sbjct: 170 XHQVVTRWYRAPELLFGA-----RMYGVGVDMWAVGCILAELL 207
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 80/205 (39%), Gaps = 17/205 (8%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQ----------EFIDEVCFLASIQHRNLVT 66
+G+G FG VY+G +D + + R T EF++E + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 67 LLGYCQENNLQFLIYEYIPNGSVSIHLY-----GPSQVSRQKLEFKHRLSIXXXXXXXXX 121
LLG + ++ E + +G + +L + R + + +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 122 XXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASE 181
+ VH+D N +V DF K+ D G+ + T + ++A E
Sbjct: 145 YLNAK--KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPE 202
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVS 206
+ F+ SD++SFGV L E+ S
Sbjct: 203 SLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 120/297 (40%), Gaps = 51/297 (17%)
Query: 17 IGEGKFGEVYK----GLLQDGML--VAIKK-RPGAPTQE---FIDEVCFLASI-QHRNLV 65
+G G FG+V + G+ + VA+K + GA E + E+ L I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 66 TLLGYC-QENNLQFLIYEYIPNGSVSIHL------YGPSQVSRQKLEFKHRLS----IXX 114
LLG C + +I E+ G++S +L + P +V+ + L +K L+ I
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDL-YKDFLTLEHLICY 153
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLR-------NFLGRTDVAGP 167
+ +H+D N+L+ E + K+ D GL +++ + D P
Sbjct: 154 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 213
Query: 168 SSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQ 227
+ + IF R ++ +SDV+SFGV L E+ S V+
Sbjct: 214 LKWMAPETIF-------DRVYTIQSDVWSFGVLLWEIFS-----------LGASPYPGVK 255
Query: 228 NSRDFSNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
+F LK +T E Q ++ C +RP+ S++V L L
Sbjct: 256 IDEEFCRRLKEGTRMRAPDYTT---PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 78/174 (44%), Gaps = 17/174 (9%)
Query: 41 RPGAPTQEFIDEVCFLASIQHRNLVTLLGYCQENNLQ--FLIYEYIPNGSV-SIHLYGPS 97
+P P ++ E+ L + H N+V L+ + N ++++E + G V + P
Sbjct: 75 QPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPL 134
Query: 98 QVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRN 157
+ + F+ + +++H+D K +N+LV ED K+AD G+ N
Sbjct: 135 SEDQARFYFQDLIK---------GIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSN 185
Query: 158 FLGRTDVAGPSSQVTADEIFLASE-VKEFRR-FSEKS-DVYSFGVFLLELVSGR 208
+D S F+A E + E R+ FS K+ DV++ GV L V G+
Sbjct: 186 EFKGSDAL--LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 25/203 (12%)
Query: 17 IGEGKFGEVYKGLLQDGMLVA------IKKRPGAPTQE---FIDEVCFLASIQHRNLVTL 67
+G G +GEV L +D + A IKK T +DEV L + H N++ L
Sbjct: 12 LGSGAYGEVL--LCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 69
Query: 68 LGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXX 127
+ ++ +L+ E G + + + RQK F +
Sbjct: 70 YEFFEDKRNYYLVMEVYRGGELFDEI-----ILRQK--FSEVDAAVIMKQVLSGTTYLHK 122
Query: 128 PRVVHKDFKTANVLVD---EDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKE 184
+VH+D K N+L++ D + K+ D GL +V G + ++A EV
Sbjct: 123 HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGKMKERLGTAYYIAPEVLR 179
Query: 185 FRRFSEKSDVYSFGVFLLELVSG 207
+++ EK DV+S GV L L+ G
Sbjct: 180 -KKYDEKCDVWSCGVILYILLCG 201
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 120/297 (40%), Gaps = 51/297 (17%)
Query: 17 IGEGKFGEVYK----GLLQDGML--VAIKK-RPGAPTQE---FIDEVCFLASIQHR-NLV 65
+G G FG+V + G+ + VA+K + GA E + E+ L I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 66 TLLGYCQENNLQFL-IYEYIPNGSVSIHL------YGPSQVSRQKLEFKHRLS----IXX 114
LLG C + + I E+ G++S +L + P +V+ + L +K L+ I
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDL-YKDFLTLEHLICY 144
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLR-------NFLGRTDVAGP 167
+ +H+D N+L+ E + K+ D GL +++ + D P
Sbjct: 145 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 204
Query: 168 SSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQ 227
+ + IF R ++ +SDV+SFGV L E+ S V+
Sbjct: 205 LKWMAPETIF-------DRVYTIQSDVWSFGVLLWEIFS-----------LGASPYPGVK 246
Query: 228 NSRDFSNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
+F LK +T E Q ++ C +RP+ S++V L L
Sbjct: 247 IDEEFCRRLKEGTRMRAPDYTT---PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 300
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 110/302 (36%), Gaps = 50/302 (16%)
Query: 17 IGEGKFGEVYK----GLLQD--GMLVAIKK-RPGAPTQE---FIDEVCFLASI-QHRNLV 65
+G G FG+V + GL++ M VA+K +P A E + E+ L+ + H N+V
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 66 TLLGYCQENNLQFLIYEYIPNG-----------SVSIHLYGPSQVSRQKLEFKHRLSIXX 114
LLG C +I EY G S P+ + +L +
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-------RNFLGRTDVAGP 167
+H+D N+L+ I K+ D GL N++ + + P
Sbjct: 151 SYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 210
Query: 168 SSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQ 227
+ + IF ++ +SDV+S+G+FL EL S +
Sbjct: 211 VKWMAPESIFNCV-------YTFESDVWSYGIFLWELFSLGSSPYPGMPVD--------- 254
Query: 228 NSRDFSNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLDKE 287
S K++ E E ++ C D +RP+ +V +++ + +
Sbjct: 255 -----SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309
Query: 288 MN 289
N
Sbjct: 310 TN 311
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 120/297 (40%), Gaps = 51/297 (17%)
Query: 17 IGEGKFGEVYK----GLLQDGML--VAIKK-RPGAPTQE---FIDEVCFLASIQHR-NLV 65
+G G FG+V + G+ + VA+K + GA E + E+ L I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 66 TLLGYCQENNLQFL-IYEYIPNGSVSIHL------YGPSQVSRQKLEFKHRLS----IXX 114
LLG C + + I E+ G++S +L + P +V+ + L +K L+ I
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDL-YKDFLTLEHLICY 144
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLR-------NFLGRTDVAGP 167
+ +H+D N+L+ E + K+ D GL +++ + D P
Sbjct: 145 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 204
Query: 168 SSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQ 227
+ + IF R ++ +SDV+SFGV L E+ S V+
Sbjct: 205 LKWMAPETIF-------DRVYTIQSDVWSFGVLLWEIFS-----------LGASPYPGVK 246
Query: 228 NSRDFSNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
+F LK +T E Q ++ C +RP+ S++V L L
Sbjct: 247 IDEEFCRRLKEGTRMRAPDYTT---PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 300
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 110/302 (36%), Gaps = 50/302 (16%)
Query: 17 IGEGKFGEVYK----GLLQD--GMLVAIKK-RPGAPTQE---FIDEVCFLASI-QHRNLV 65
+G G FG+V + GL++ M VA+K +P A E + E+ L+ + H N+V
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 66 TLLGYCQENNLQFLIYEYIPNG-----------SVSIHLYGPSQVSRQKLEFKHRLSIXX 114
LLG C +I EY G S P+ + +L +
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-------RNFLGRTDVAGP 167
+H+D N+L+ I K+ D GL N++ + + P
Sbjct: 167 SYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 226
Query: 168 SSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQ 227
+ + IF ++ +SDV+S+G+FL EL S +
Sbjct: 227 VKWMAPESIFNCV-------YTFESDVWSYGIFLWELFSLGSSPYPGMPVD--------- 270
Query: 228 NSRDFSNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLDKE 287
S K++ E E ++ C D +RP+ +V +++ + +
Sbjct: 271 -----SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 325
Query: 288 MN 289
N
Sbjct: 326 TN 327
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 110/302 (36%), Gaps = 50/302 (16%)
Query: 17 IGEGKFGEVYK----GLLQD--GMLVAIKK-RPGAPTQE---FIDEVCFLASI-QHRNLV 65
+G G FG+V + GL++ M VA+K +P A E + E+ L+ + H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 66 TLLGYCQENNLQFLIYEYIPNG-----------SVSIHLYGPSQVSRQKLEFKHRLSIXX 114
LLG C +I EY G S P+ + +L +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-------RNFLGRTDVAGP 167
+H+D N+L+ I K+ D GL N++ + + P
Sbjct: 174 SYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLP 233
Query: 168 SSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQ 227
+ + IF ++ +SDV+S+G+FL EL S +
Sbjct: 234 VKWMAPESIFNCV-------YTFESDVWSYGIFLWELFSLGSSPYPGMPVD--------- 277
Query: 228 NSRDFSNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLDKE 287
S K++ E E ++ C D +RP+ +V +++ + +
Sbjct: 278 -----SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 332
Query: 288 MN 289
N
Sbjct: 333 TN 334
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 110/302 (36%), Gaps = 50/302 (16%)
Query: 17 IGEGKFGEVYK----GLLQD--GMLVAIKK-RPGAPTQE---FIDEVCFLASI-QHRNLV 65
+G G FG+V + GL++ M VA+K +P A E + E+ L+ + H N+V
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 66 TLLGYCQENNLQFLIYEYIPNG-----------SVSIHLYGPSQVSRQKLEFKHRLSIXX 114
LLG C +I EY G S P+ + +L +
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-------RNFLGRTDVAGP 167
+H+D N+L+ I K+ D GL N++ + + P
Sbjct: 169 SYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 228
Query: 168 SSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQ 227
+ + IF ++ +SDV+S+G+FL EL S +
Sbjct: 229 VKWMAPESIFNCV-------YTFESDVWSYGIFLWELFSLGSSPYPGMPVD--------- 272
Query: 228 NSRDFSNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLDKE 287
S K++ E E ++ C D +RP+ +V +++ + +
Sbjct: 273 -----SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 327
Query: 288 MN 289
N
Sbjct: 328 TN 329
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 110/302 (36%), Gaps = 50/302 (16%)
Query: 17 IGEGKFGEVYK----GLLQD--GMLVAIKK-RPGAPTQE---FIDEVCFLASI-QHRNLV 65
+G G FG+V + GL++ M VA+K +P A E + E+ L+ + H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 66 TLLGYCQENNLQFLIYEYIPNG-----------SVSIHLYGPSQVSRQKLEFKHRLSIXX 114
LLG C +I EY G S P+ + +L +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-------RNFLGRTDVAGP 167
+H+D N+L+ I K+ D GL N++ + + P
Sbjct: 174 SYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 233
Query: 168 SSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQ 227
+ + IF ++ +SDV+S+G+FL EL S +
Sbjct: 234 VKWMAPESIFNCV-------YTFESDVWSYGIFLWELFSLGSSPYPGMPVD--------- 277
Query: 228 NSRDFSNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLDKE 287
S K++ E E ++ C D +RP+ +V +++ + +
Sbjct: 278 -----SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 332
Query: 288 MN 289
N
Sbjct: 333 TN 334
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 36/214 (16%)
Query: 9 KNFSDKNLIGEGKFGEVYKGL-LQDGMLVAIKKR--PGAPTQEFI-DEVCFLASIQHRNL 64
K ++ IG+G G VY + + G VAI++ P +E I +E+ + ++ N+
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 80
Query: 65 VTLLGYCQENNLQFLIYEYIPNGS----VSIHLYGPSQVSR------QKLEFKHRLSIXX 114
V L + +++ EY+ GS V+ Q++ Q LEF H
Sbjct: 81 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH------ 134
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGR-TDVAGPSSQVTA 173
+V+H++ K+ N+L+ D K+ D G F + T S +
Sbjct: 135 ------------SNQVIHRNIKSDNILLGMDGSVKLTDFG---FCAQITPEQSKRSTMVG 179
Query: 174 DEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
++A EV + + K D++S G+ +E++ G
Sbjct: 180 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 213
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 25/203 (12%)
Query: 17 IGEGKFGEVYKGLLQDGMLVA------IKKRPGAPTQE---FIDEVCFLASIQHRNLVTL 67
+G G +GEV L +D + A IKK T +DEV L + H N++ L
Sbjct: 29 LGSGAYGEVL--LCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 86
Query: 68 LGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXX 127
+ ++ +L+ E G + + + RQK F +
Sbjct: 87 YEFFEDKRNYYLVMEVYRGGELFDEI-----ILRQK--FSEVDAAVIMKQVLSGTTYLHK 139
Query: 128 PRVVHKDFKTANVLVD---EDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKE 184
+VH+D K N+L++ D + K+ D GL +V G + ++A EV
Sbjct: 140 HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGKMKERLGTAYYIAPEVLR 196
Query: 185 FRRFSEKSDVYSFGVFLLELVSG 207
+++ EK DV+S GV L L+ G
Sbjct: 197 -KKYDEKCDVWSCGVILYILLCG 218
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 84/202 (41%), Gaps = 26/202 (12%)
Query: 17 IGEGKFGEVYKGLLQDG-MLVAIK-------KRPGAPTQEFIDEVCFLASIQHRNLVTLL 68
+G+GKFG VY + +VA+K ++ G Q E+ A + H N++ L
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQ-LRREIEIQAHLHHPNILRLY 89
Query: 69 GYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
Y + +LI EY P G LY Q S F + +
Sbjct: 90 NYFYDRRRIYLILEYAPRGE----LYKELQKS---CTFDEQRTATIMEELADALMYCHGK 142
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNF---LGRTDVAGPSSQVTADEIFLASEVKEF 185
+V+H+D K N+L+ K+AD G L R + G T D +L E+ E
Sbjct: 143 KVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCG-----TLD--YLPPEMIEG 195
Query: 186 RRFSEKSDVYSFGVFLLELVSG 207
R +EK D++ GV EL+ G
Sbjct: 196 RMHNEKVDLWCIGVLCYELLVG 217
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 121/306 (39%), Gaps = 55/306 (17%)
Query: 9 KNFSDKNLIGEGKFGEVYK----GLLQDG--MLVAIK----KRPGAPTQEFIDEVCFLAS 58
+N ++G G FG+V G+ + G + VA+K K + + + E+ +
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 59 I-QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGP-SQVSRQKLEFKH--RLS--- 111
+ H N+V LLG C + +LI+EY G + +L + S ++E+++ RL
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 112 ----------IXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL------ 155
+ VH+D NVLV + K+ D GL
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMS 224
Query: 156 -RNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXX 214
N++ R + P + + +F ++ KSDV+S+G+ L E+ S
Sbjct: 225 DSNYVVRGNARLPVKWMAPESLFEGI-------YTIKSDVWSYGILLWEIFS-LGVNPYP 276
Query: 215 XXXXXXXXVELVQNSRDFSNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMS 274
+L+QN +D+ ++T EE ++ C S +RPS
Sbjct: 277 GIPVDANFYKLIQNGFK-------MDQPFYAT------EEIYIIMQSCWAFDSRKRPSFP 323
Query: 275 DVVTEL 280
++ + L
Sbjct: 324 NLTSFL 329
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 13/152 (8%)
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLRNFLGR-TDVAGPSSQVT--ADEIFLASEVKE-FR 186
+H+D K N+L+ ED ++AD G+ FL D+ + T ++A EV E R
Sbjct: 138 IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVR 197
Query: 187 RFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNL-LKILDERLWS 245
+ K+D++SFG+ +EL +G A + +QN D +L + D+ +
Sbjct: 198 GYDFKADIWSFGITAIELATG--AAPYHKYPPMKVLMLTLQN--DPPSLETGVQDKEMLK 253
Query: 246 TFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
+ + F ++I CL E+RP+ ++++
Sbjct: 254 KYG----KSFRKMISLCLQKDPEKRPTAAELL 281
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 91/228 (39%), Gaps = 32/228 (14%)
Query: 2 EELSLATKNFSDKNLIGEGKFGEVYKGLL-----QDGML-VAIKK-RPGAPTQE---FID 51
E+ N +G G FG+V + +D +L VA+K + A E +
Sbjct: 31 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 90
Query: 52 EVCFLASI-QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQK-----LE 105
E+ ++ + QH N+V LLG C +I EY G + L ++ K LE
Sbjct: 91 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLE 150
Query: 106 FKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-------RNF 158
+ L +H+D NVL+ +AK+ D GL N+
Sbjct: 151 LRDLLHFSSQVAQGMAFLASK--NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 208
Query: 159 LGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
+ + + P + + IF ++ +SDV+S+G+ L E+ S
Sbjct: 209 IVKGNARLPVKWMAPESIFDCV-------YTVQSDVWSYGILLWEIFS 249
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 115/298 (38%), Gaps = 53/298 (17%)
Query: 17 IGEGKFGEVYK----GLLQDGML--VAIKK-RPGAPTQE---FIDEVCFLASIQHR-NLV 65
+G G FG+V + G+ + VA+K + GA E + E+ L I H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 66 TLLGYCQENNLQFL-IYEYIPNGSVSIHLY-----------GPSQVSRQKLEFKHRLSIX 113
LLG C + + I E+ G++S +L P + + L +H +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 114 XXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLR-------NFLGRTDVAG 166
+ +H+D N+L+ E + K+ D GL +++ + D
Sbjct: 157 FQVAKGMEFLASR--KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 214
Query: 167 PSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELV 226
P + + IF R ++ +SDV+SFGV L E+ S V
Sbjct: 215 PLKWMAPETIF-------DRVYTIQSDVWSFGVLLWEIFS-----------LGASPYPGV 256
Query: 227 QNSRDFSNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
+ +F LK +T E Q ++ C +RP+ S++V L L
Sbjct: 257 KIDEEFCRRLKEGTRMRAPDYTT---PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 311
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 116/290 (40%), Gaps = 37/290 (12%)
Query: 17 IGEGKFGEVYK----GLLQDGML--VAIKK-RPGAPTQE---FIDEVCFLASIQHR-NLV 65
+G G FG+V + G+ + VA+K + GA E + E+ L I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 66 TLLGYCQENNLQFL-IYEYIPNGSVSIHL------YGPSQVSRQKLEFKHRLS----IXX 114
LLG C + + I E+ G++S +L + P +V+ + L +K L+ I
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDL-YKDFLTLEHLICY 144
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTAD 174
+ +H+D N+L+ E + K+ D GL + +
Sbjct: 145 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 204
Query: 175 EIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSN 234
++A E R ++ +SDV+SFGV L E+ S V+ +F
Sbjct: 205 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-----------LGASPYPGVKIDEEFCR 253
Query: 235 LLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
LK +T E Q ++ C +RP+ S++V L L
Sbjct: 254 RLKEGTRMRAPDYTT---PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 300
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 89/204 (43%), Gaps = 18/204 (8%)
Query: 5 SLATKNFSDKNLIGEGKFGEVYK-GLLQDGMLVAIKKRPGAPTQEFIDEVCFLASIQHRN 63
+L T +F +LI G Y +L+ ++V +K+ + DE L+ + H
Sbjct: 13 TLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQ-----VEHTNDERLMLSIVTHPF 67
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXX 123
++ + G Q+ F+I +YI G + L R+ F + ++
Sbjct: 68 IIRMWGTFQDAQQIFMIMDYIEGGELFSLL-------RKSQRFPNPVAKFYAAEVCLALE 120
Query: 124 XXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVK 183
++++D K N+L+D++ K+ D G + V + + ++A EV
Sbjct: 121 YLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKY-----VPDVTYXLCGTPDYIAPEVV 175
Query: 184 EFRRFSEKSDVYSFGVFLLELVSG 207
+ +++ D +SFG+ + E+++G
Sbjct: 176 STKPYNKSIDWWSFGILIYEMLAG 199
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 91/228 (39%), Gaps = 32/228 (14%)
Query: 2 EELSLATKNFSDKNLIGEGKFGEVYKGLL-----QDGML-VAIKK-RPGAPTQE---FID 51
E+ N +G G FG+V + +D +L VA+K + A E +
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 52 EVCFLASI-QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQK-----LE 105
E+ ++ + QH N+V LLG C +I EY G + L ++ K LE
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLE 158
Query: 106 FKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-------RNF 158
+ L +H+D NVL+ +AK+ D GL N+
Sbjct: 159 LRDLLHFSSQVAQGMAFLASK--NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 216
Query: 159 LGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
+ + + P + + IF ++ +SDV+S+G+ L E+ S
Sbjct: 217 IVKGNARLPVKWMAPESIFDCV-------YTVQSDVWSYGILLWEIFS 257
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 115/288 (39%), Gaps = 40/288 (13%)
Query: 10 NFSDKNLIGEGKFGEVYKGLLQDGMLVA----IKKRPGAPTQEFIDEVCFLASIQHRNLV 65
NF K + E GE++KG Q +V ++ +++F +E L H N++
Sbjct: 13 NFLTK--LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVL 70
Query: 66 TLLGYCQENNLQF--LIYEYIPNGSVSIHLY-GPSQVSRQKLEFKHRLSIXXXXXXXXXX 122
+LG CQ LI ++P GS+ L+ G + V Q K L +
Sbjct: 71 PVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDM----ARGMAF 126
Query: 123 XXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLR-NFLGRTDVAGPSSQVTADEIFLASE 181
P + + +V++DED A+++ A ++ +F + P+ A E
Sbjct: 127 LHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPA--WVAPEALQKKP 184
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNL---LKI 238
RR +D++SF V L ELV+ RE D SN+ +K+
Sbjct: 185 EDTNRR---SADMWSFAVLLWELVT-REVPFA-----------------DLSNMEIGMKV 223
Query: 239 LDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTLDK 286
E L T +L+ C++ +RP +V L++ DK
Sbjct: 224 ALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQDK 271
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 87/215 (40%), Gaps = 21/215 (9%)
Query: 9 KNFSDKNLIGEGKFGEVYKGLLQ------DGMLVAIKKRPGAPTQE----FIDEVCFLAS 58
KN + +G G FGEVY+G + + VA+K P +++ F+ E ++
Sbjct: 31 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 59 IQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLY----GPSQVSRQKLEFKHRLSIXX 114
+ H+N+V +G ++ +F++ E + G + L PSQ S L L +
Sbjct: 91 LNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS--SLAMLDLLHVAR 148
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLV---DEDFIAKVADAGLRNFLGRTDVAGPSSQV 171
+H+D N L+ +AK+ D G+ + R
Sbjct: 149 DIACGCQYLEEN--HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 206
Query: 172 TADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++ E F+ K+D +SFGV L E+ S
Sbjct: 207 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 13/152 (8%)
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLRNFLGR-TDVAGPSSQVT--ADEIFLASEVKE-FR 186
+H+D K N+L+ ED ++AD G+ FL D+ + T ++A EV E R
Sbjct: 143 IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVR 202
Query: 187 RFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNL-LKILDERLWS 245
+ K+D++SFG+ +EL +G A + +QN D +L + D+ +
Sbjct: 203 GYDFKADIWSFGITAIELATG--AAPYHKYPPMKVLMLTLQN--DPPSLETGVQDKEMLK 258
Query: 246 TFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
+ + F ++I CL E+RP+ ++++
Sbjct: 259 KYG----KSFRKMISLCLQKDPEKRPTAAELL 286
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 116/290 (40%), Gaps = 37/290 (12%)
Query: 17 IGEGKFGEVYK----GLLQDGML--VAIKK-RPGAPTQE---FIDEVCFLASIQHR-NLV 65
+G G FG+V + G+ + VA+K + GA E + E+ L I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 66 TLLGYC-QENNLQFLIYEYIPNGSVSIHL------YGPSQVSRQKLEFKHRLS----IXX 114
LLG C + +I E+ G++S +L + P +V+ + L +K L+ I
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDL-YKDFLTLEHLICY 153
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTAD 174
+ +H+D N+L+ E + K+ D GL + +
Sbjct: 154 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 175 EIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSN 234
++A E R ++ +SDV+SFGV L E+ S V+ +F
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-----------LGASPYPGVKIDEEFCR 262
Query: 235 LLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
LK +T E Q ++ C +RP+ S++V L L
Sbjct: 263 RLKEGTRMRAPDYTT---PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 116/290 (40%), Gaps = 37/290 (12%)
Query: 17 IGEGKFGEVYK----GLLQDGML--VAIKK-RPGAPTQE---FIDEVCFLASIQHR-NLV 65
+G G FG+V + G+ + VA+K + GA E + E+ L I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 66 TLLGYCQENNLQFL-IYEYIPNGSVSIHL------YGPSQVSRQKLEFKHRLS----IXX 114
LLG C + + I E+ G++S +L + P +V+ + L +K L+ I
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDL-YKDFLTLEHLICY 144
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTAD 174
+ +H+D N+L+ E + K+ D GL + +
Sbjct: 145 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 204
Query: 175 EIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSN 234
++A E R ++ +SDV+SFGV L E+ S V+ +F
Sbjct: 205 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-----------LGASPYPGVKIDEEFCR 253
Query: 235 LLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
LK +T E Q ++ C +RP+ S++V L L
Sbjct: 254 RLKEGTRMRAPDYTT---PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 300
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 87/215 (40%), Gaps = 21/215 (9%)
Query: 9 KNFSDKNLIGEGKFGEVYKGLLQ------DGMLVAIKKRPGAPTQE----FIDEVCFLAS 58
KN + +G G FGEVY+G + + VA+K P +++ F+ E ++
Sbjct: 45 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 104
Query: 59 IQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYG----PSQVSRQKLEFKHRLSIXX 114
+ H+N+V +G ++ +F++ E + G + L PSQ S L L +
Sbjct: 105 LNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS--SLAMLDLLHVAR 162
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLV---DEDFIAKVADAGLRNFLGRTDVAGPSSQV 171
+H+D N L+ +AK+ D G+ + R
Sbjct: 163 DIACGCQYLEEN--HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 220
Query: 172 TADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++ E F+ K+D +SFGV L E+ S
Sbjct: 221 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 93/239 (38%), Gaps = 41/239 (17%)
Query: 2 EELSLATKNFSDKNLIGEGKFGEVYKGLL-----QDGML-VAIKK-RPGAPTQE---FID 51
E+ N +G G FG+V + +D +L VA+K + A E +
Sbjct: 24 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 83
Query: 52 EVCFLASI-QHRNLVTLLGYCQENNLQFLIYEYIPNGSV-------SIHLYGPSQVSRQK 103
E+ ++ + QH N+V LLG C +I EY G + + + GPS Q
Sbjct: 84 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQD 143
Query: 104 LE---------FKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAG 154
E + R + +H+D NVL+ +AK+ D G
Sbjct: 144 PEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFG 203
Query: 155 L-------RNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
L N++ + + P + + IF ++ +SDV+S+G+ L E+ S
Sbjct: 204 LARDIMNDSNYIVKGNARLPVKWMAPESIFDCV-------YTVQSDVWSYGILLWEIFS 255
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 117/294 (39%), Gaps = 45/294 (15%)
Query: 17 IGEGKFGEVYK----GLLQDGML--VAIKK-RPGAPTQE---FIDEVCFLASI-QHRNLV 65
+G G FG+V + G+ + VA+K + GA E + E+ L I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 66 TLLGYC-QENNLQFLIYEYIPNGSVSIHL------YGPSQVSRQKLEFKHRLS----IXX 114
LLG C + +I E+ G++S +L + P +V+ + L +K L+ I
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDL-YKDFLTLEHLICY 153
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTAD 174
+ +H+D N+L+ E + K+ D G L R P D
Sbjct: 154 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFG----LARDIYKDPDXVRKGD 209
Query: 175 E----IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSR 230
++A E R ++ +SDV+SFGV L E+ S V+
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-----------LGASPYPGVKIDE 258
Query: 231 DFSNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
+F LK +T E Q ++ C +RP+ S++V L L
Sbjct: 259 EFCRRLKEGTRMRAPDYTT---PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 19/205 (9%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI--QHRNLVTLL-----G 69
IG+G++GEV+ G + G VA+K + E ++ +H N++ + G
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKG 103
Query: 70 YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPR 129
L +LI +Y NGS+ +L + ++ L+ + P
Sbjct: 104 TGSWTQL-YLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA 162
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLR-NFLGRTD-VAGPSSQVTADEIFLASEV----- 182
+ H+D K+ N+LV ++ +AD GL F+ T+ V P + + ++ EV
Sbjct: 163 IAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESL 222
Query: 183 --KEFRRFSEKSDVYSFGVFLLELV 205
F+ + +D+YSFG+ L E+
Sbjct: 223 NRNHFQSYI-MADMYSFGLILWEVA 246
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 29/208 (13%)
Query: 20 GKFGEVYKGLLQDGMLVAIKKRPGAPTQEFIDEVCFLAS--IQHRNLVTLLGYCQE-NNL 76
G+FG V+K L + VA+K P Q + E ++ ++H NL+ + + +NL
Sbjct: 26 GRFGCVWKAQLMND-FVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGSNL 84
Query: 77 Q---FLIYEYIPNGSVSIHLYGP----------SQVSRQKLEFKHRLSIXXXXXXXXXXX 123
+ +LI + GS++ +L G ++ + L + H
Sbjct: 85 EVELWLITAFHDKGSLTDYLKGNIITWNELCHVAETMSRGLSYLHE-------DVPWCRG 137
Query: 124 XXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVK 183
P + H+DFK+ NVL+ D A +AD GL G + ++A EV
Sbjct: 138 EGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVL 197
Query: 184 E----FRRFS-EKSDVYSFGVFLLELVS 206
E F+R + + D+Y+ G+ L ELVS
Sbjct: 198 EGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 86/215 (40%), Gaps = 21/215 (9%)
Query: 9 KNFSDKNLIGEGKFGEVYKGLLQ------DGMLVAIKKRPGAPTQE----FIDEVCFLAS 58
KN + +G G FGEVY+G + + VA+K P +++ F+ E ++
Sbjct: 31 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 59 IQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYG----PSQVSRQKLEFKHRLSIXX 114
H+N+V +G ++ +F++ E + G + L PSQ S L L +
Sbjct: 91 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS--SLAMLDLLHVAR 148
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLV---DEDFIAKVADAGLRNFLGRTDVAGPSSQV 171
+H+D N L+ +AK+ D G+ + R
Sbjct: 149 DIACGCQYLEEN--HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCA 206
Query: 172 TADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++ E F+ K+D +SFGV L E+ S
Sbjct: 207 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 86/215 (40%), Gaps = 21/215 (9%)
Query: 9 KNFSDKNLIGEGKFGEVYKGLLQ------DGMLVAIKKRPGAPTQE----FIDEVCFLAS 58
KN + +G G FGEVY+G + + VA+K P +++ F+ E ++
Sbjct: 47 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 106
Query: 59 IQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYG----PSQVSRQKLEFKHRLSIXX 114
H+N+V +G ++ +F++ E + G + L PSQ S L L +
Sbjct: 107 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS--SLAMLDLLHVAR 164
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLV---DEDFIAKVADAGLRNFLGRTDVAGPSSQV 171
+H+D N L+ +AK+ D G+ + R
Sbjct: 165 DIACGCQYLEEN--HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 222
Query: 172 TADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++ E F+ K+D +SFGV L E+ S
Sbjct: 223 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 90/230 (39%), Gaps = 32/230 (13%)
Query: 2 EELSLATKNFSDKNLIGEGKFGEVYKGLL-----QDGML-VAIKK-RPGAPTQE---FID 51
E+ N +G G FG+V + +D +L VA+K + A E +
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 52 EVCFLASI-QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEF---- 106
E+ ++ + QH N+V LLG C +I EY G + L S+V F
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIAN 158
Query: 107 ---KHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-------R 156
R + +H+D NVL+ +AK+ D GL
Sbjct: 159 STLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 218
Query: 157 NFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
N++ + + P + + IF ++ +SDV+S+G+ L E+ S
Sbjct: 219 NYIVKGNARLPVKWMAPESIFDCV-------YTVQSDVWSYGILLWEIFS 261
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 86/215 (40%), Gaps = 21/215 (9%)
Query: 9 KNFSDKNLIGEGKFGEVYKGLLQ------DGMLVAIKKRPGAPTQE----FIDEVCFLAS 58
KN + +G G FGEVY+G + + VA+K P +++ F+ E ++
Sbjct: 31 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 59 IQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLY----GPSQVSRQKLEFKHRLSIXX 114
H+N+V +G ++ +F++ E + G + L PSQ S L L +
Sbjct: 91 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS--SLAMLDLLHVAR 148
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLV---DEDFIAKVADAGLRNFLGRTDVAGPSSQV 171
+H+D N L+ +AK+ D G+ + R
Sbjct: 149 DIACGCQYLEEN--HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 206
Query: 172 TADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++ E F+ K+D +SFGV L E+ S
Sbjct: 207 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 86/215 (40%), Gaps = 21/215 (9%)
Query: 9 KNFSDKNLIGEGKFGEVYKGLLQ------DGMLVAIKKRPGAPTQE----FIDEVCFLAS 58
KN + +G G FGEVY+G + + VA+K P +++ F+ E ++
Sbjct: 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 89
Query: 59 IQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLY----GPSQVSRQKLEFKHRLSIXX 114
H+N+V +G ++ +F++ E + G + L PSQ S L L +
Sbjct: 90 FNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPS--SLAMLDLLHVAR 147
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLV---DEDFIAKVADAGLRNFLGRTDVAGPSSQV 171
+H+D N L+ +AK+ D G+ + R
Sbjct: 148 DIACGCQYLEEN--HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 205
Query: 172 TADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++ E F+ K+D +SFGV L E+ S
Sbjct: 206 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 90/230 (39%), Gaps = 32/230 (13%)
Query: 2 EELSLATKNFSDKNLIGEGKFGEVYKGLL-----QDGML-VAIKK-RPGAPTQE---FID 51
E+ N +G G FG+V + +D +L VA+K + A E +
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 52 EVCFLASI-QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEF---- 106
E+ ++ + QH N+V LLG C +I EY G + L S+V F
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIAN 158
Query: 107 ---KHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-------R 156
R + +H+D NVL+ +AK+ D GL
Sbjct: 159 STASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 218
Query: 157 NFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
N++ + + P + + IF ++ +SDV+S+G+ L E+ S
Sbjct: 219 NYIVKGNARLPVKWMAPESIFDCV-------YTVQSDVWSYGILLWEIFS 261
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 86/215 (40%), Gaps = 21/215 (9%)
Query: 9 KNFSDKNLIGEGKFGEVYKGLLQ------DGMLVAIKKRPGAPTQE----FIDEVCFLAS 58
KN + +G G FGEVY+G + + VA+K P +++ F+ E ++
Sbjct: 37 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 96
Query: 59 IQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLY----GPSQVSRQKLEFKHRLSIXX 114
H+N+V +G ++ +F++ E + G + L PSQ S L L +
Sbjct: 97 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS--SLAMLDLLHVAR 154
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLV---DEDFIAKVADAGLRNFLGRTDVAGPSSQV 171
+H+D N L+ +AK+ D G+ + R
Sbjct: 155 DIACGCQYLEEN--HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 212
Query: 172 TADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++ E F+ K+D +SFGV L E+ S
Sbjct: 213 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 86/215 (40%), Gaps = 21/215 (9%)
Query: 9 KNFSDKNLIGEGKFGEVYKGLLQ------DGMLVAIKKRPGAPTQE----FIDEVCFLAS 58
KN + +G G FGEVY+G + + VA+K P +++ F+ E ++
Sbjct: 57 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 116
Query: 59 IQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLY----GPSQVSRQKLEFKHRLSIXX 114
H+N+V +G ++ +F++ E + G + L PSQ S L L +
Sbjct: 117 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS--SLAMLDLLHVAR 174
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLV---DEDFIAKVADAGLRNFLGRTDVAGPSSQV 171
+H+D N L+ +AK+ D G+ + R
Sbjct: 175 DIACGCQYLEEN--HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 232
Query: 172 TADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++ E F+ K+D +SFGV L E+ S
Sbjct: 233 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 86/215 (40%), Gaps = 21/215 (9%)
Query: 9 KNFSDKNLIGEGKFGEVYKGLLQ------DGMLVAIKKRPGAPTQE----FIDEVCFLAS 58
KN + +G G FGEVY+G + + VA+K P +++ F+ E ++
Sbjct: 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 89
Query: 59 IQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYG----PSQVSRQKLEFKHRLSIXX 114
H+N+V +G ++ +F++ E + G + L PSQ S L L +
Sbjct: 90 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS--SLAMLDLLHVAR 147
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLV---DEDFIAKVADAGLRNFLGRTDVAGPSSQV 171
+H+D N L+ +AK+ D G+ + R
Sbjct: 148 DIACGCQYLEEN--HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 205
Query: 172 TADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++ E F+ K+D +SFGV L E+ S
Sbjct: 206 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 92/206 (44%), Gaps = 21/206 (10%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI--QHRNLVTLLGYCQEN 74
IG+G+FGEV++G + G VA+K + + E ++ +H N++ + ++
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 95
Query: 75 NLQF----LIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV 130
N + L+ +Y +GS+ +L + ++ + P +
Sbjct: 96 NGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI 155
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLR----NFLGRTDVAGPSSQVTADEIFLASEV---- 182
H+D K+ N+LV ++ +AD GL + D+A P+ +V ++A EV
Sbjct: 156 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA-PNHRVGTKR-YMAPEVLDDS 213
Query: 183 ---KEFRRFSEKSDVYSFGVFLLELV 205
K F F +++D+Y+ G+ E+
Sbjct: 214 INMKHFESF-KRADIYAMGLVFWEIA 238
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 111/290 (38%), Gaps = 38/290 (13%)
Query: 17 IGEGKFGEVYK----GLLQDGML--VAIKK-RPGAPTQE---FIDEVCFLASIQHR-NLV 65
+G G FG+V + G+ + VA+K + GA E + E+ L I H N+V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 66 TLLGYCQENNLQFL-IYEYIPNGSVSIHLYG----------PSQVSRQKLEFKHRLSIXX 114
LLG C + + I E+ G++S +L P + + L +H +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTAD 174
+ +H+D N+L+ E + K+ D GL + +
Sbjct: 156 QVAKGMEFLASR--KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 175 EIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSN 234
++A E R ++ +SDV+SFGV L E+ S V+ +F
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-----------LGASPYPGVKIDEEFCR 262
Query: 235 LLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
LK +T E Q ++ C +RP+ S++V L L
Sbjct: 263 RLKEGTRMRAPDYTT---PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 83/204 (40%), Gaps = 29/204 (14%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK------RPGAPTQEFIDEVCFLASIQHRNLVTLLGY 70
IGEG +G VYK G A+KK G P+ I E+ L ++H N+V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT-IREISILKELKHSNIVKLYDV 68
Query: 71 CQENNLQFLIYEYIPNGS---VSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXX 127
L++E++ + + G V+ + + I
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR--------- 119
Query: 128 PRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEF-- 185
RV+H+D K N+L++ + K+AD GL G P + T + + L +
Sbjct: 120 -RVLHRDLKPQNLLINREGELKIADFGLARAFGI-----PVRKYTHEVVTLWYRAPDVLM 173
Query: 186 --RRFSEKSDVYSFGVFLLELVSG 207
+++S D++S G E+V+G
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 92/216 (42%), Gaps = 21/216 (9%)
Query: 3 ELSLATKNFSDKNLIGEGKFGEVY----KGLLQDGMLVAIKKRPGAPTQE----FIDEVC 54
++ L ++F ++G+G FG+V+ K Q + A+KK + +++
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 55 FLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXX 114
+ +H L + Q F + EY+ G + H+ + + F I
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILG 131
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL--RNFLGRTDVAGPSSQVT 172
+V++D K N+L+D+D K+AD G+ N LG +++
Sbjct: 132 LQFLHSKG-------IVYRDLKLDNILLDKDGHIKIADFGMCKENMLG----DAKTNEFC 180
Query: 173 ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
++A E+ ++++ D +SFGV L E++ G+
Sbjct: 181 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 86/215 (40%), Gaps = 21/215 (9%)
Query: 9 KNFSDKNLIGEGKFGEVYKGLLQ------DGMLVAIKKRPGAPTQE----FIDEVCFLAS 58
KN + +G G FGEVY+G + + VA+K P +++ F+ E ++
Sbjct: 48 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 107
Query: 59 IQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYG----PSQVSRQKLEFKHRLSIXX 114
H+N+V +G ++ +F++ E + G + L PSQ S L L +
Sbjct: 108 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS--SLAMLDLLHVAR 165
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLV---DEDFIAKVADAGLRNFLGRTDVAGPSSQV 171
+H+D N L+ +AK+ D G+ + R
Sbjct: 166 DIACGCQYLEEN--HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCA 223
Query: 172 TADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++ E F+ K+D +SFGV L E+ S
Sbjct: 224 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 86/215 (40%), Gaps = 21/215 (9%)
Query: 9 KNFSDKNLIGEGKFGEVYKGLLQ------DGMLVAIKKRPGAPTQE----FIDEVCFLAS 58
KN + +G G FGEVY+G + + VA+K P +++ F+ E ++
Sbjct: 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 130
Query: 59 IQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYG----PSQVSRQKLEFKHRLSIXX 114
H+N+V +G ++ +F++ E + G + L PSQ S L L +
Sbjct: 131 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS--SLAMLDLLHVAR 188
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLV---DEDFIAKVADAGLRNFLGRTDVAGPSSQV 171
+H+D N L+ +AK+ D G+ + R
Sbjct: 189 DIACGCQYLEEN--HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCA 246
Query: 172 TADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++ E F+ K+D +SFGV L E+ S
Sbjct: 247 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 86/215 (40%), Gaps = 21/215 (9%)
Query: 9 KNFSDKNLIGEGKFGEVYKGLLQ------DGMLVAIKKRPGAPTQE----FIDEVCFLAS 58
KN + +G G FGEVY+G + + VA+K P +++ F+ E ++
Sbjct: 22 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 81
Query: 59 IQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLY----GPSQVSRQKLEFKHRLSIXX 114
H+N+V +G ++ +F++ E + G + L PSQ S L L +
Sbjct: 82 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS--SLAMLDLLHVAR 139
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLV---DEDFIAKVADAGLRNFLGRTDVAGPSSQV 171
+H+D N L+ +AK+ D G+ + R
Sbjct: 140 DIACGCQYLEEN--HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 197
Query: 172 TADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++ E F+ K+D +SFGV L E+ S
Sbjct: 198 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 83/204 (40%), Gaps = 29/204 (14%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK------RPGAPTQEFIDEVCFLASIQHRNLVTLLGY 70
IGEG +G VYK G A+KK G P+ I E+ L ++H N+V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT-IREISILKELKHSNIVKLYDV 68
Query: 71 CQENNLQFLIYEYIPNGS---VSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXX 127
L++E++ + + G V+ + + I
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR--------- 119
Query: 128 PRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEF-- 185
RV+H+D K N+L++ + K+AD GL G P + T + + L +
Sbjct: 120 -RVLHRDLKPQNLLINREGELKIADFGLARAFGI-----PVRKYTHEVVTLWYRAPDVLM 173
Query: 186 --RRFSEKSDVYSFGVFLLELVSG 207
+++S D++S G E+V+G
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 86/215 (40%), Gaps = 21/215 (9%)
Query: 9 KNFSDKNLIGEGKFGEVYKGLLQ------DGMLVAIKKRPGAPTQE----FIDEVCFLAS 58
KN + +G G FGEVY+G + + VA+K P +++ F+ E ++
Sbjct: 45 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 104
Query: 59 IQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYG----PSQVSRQKLEFKHRLSIXX 114
H+N+V +G ++ +F++ E + G + L PSQ S L L +
Sbjct: 105 FNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPS--SLAMLDLLHVAR 162
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLV---DEDFIAKVADAGLRNFLGRTDVAGPSSQV 171
+H+D N L+ +AK+ D G+ + R
Sbjct: 163 DIACGCQYLEEN--HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 220
Query: 172 TADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++ E F+ K+D +SFGV L E+ S
Sbjct: 221 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 92/206 (44%), Gaps = 21/206 (10%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI--QHRNLVTLLGYCQEN 74
IG+G+FGEV++G + G VA+K + + E ++ +H N++ + ++
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 108
Query: 75 NLQF----LIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV 130
N + L+ +Y +GS+ +L + ++ + P +
Sbjct: 109 NGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI 168
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLR----NFLGRTDVAGPSSQVTADEIFLASEV---- 182
H+D K+ N+LV ++ +AD GL + D+A P+ +V ++A EV
Sbjct: 169 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA-PNHRVGTKR-YMAPEVLDDS 226
Query: 183 ---KEFRRFSEKSDVYSFGVFLLELV 205
K F F +++D+Y+ G+ E+
Sbjct: 227 INMKHFESF-KRADIYAMGLVFWEIA 251
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 83/204 (40%), Gaps = 29/204 (14%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKK------RPGAPTQEFIDEVCFLASIQHRNLVTLLGY 70
IGEG +G VYK G A+KK G P+ I E+ L ++H N+V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT-IREISILKELKHSNIVKLYDV 68
Query: 71 CQENNLQFLIYEYIPNGS---VSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXX 127
L++E++ + + G V+ + + I
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR--------- 119
Query: 128 PRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEF-- 185
RV+H+D K N+L++ + K+AD GL G P + T + + L +
Sbjct: 120 -RVLHRDLKPQNLLINREGELKIADFGLARAFGI-----PVRKYTHEIVTLWYRAPDVLM 173
Query: 186 --RRFSEKSDVYSFGVFLLELVSG 207
+++S D++S G E+V+G
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 92/206 (44%), Gaps = 21/206 (10%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI--QHRNLVTLLGYCQEN 74
IG+G+FGEV++G + G VA+K + + E ++ +H N++ + ++
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 72
Query: 75 NLQF----LIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV 130
N + L+ +Y +GS+ +L + ++ + P +
Sbjct: 73 NGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI 132
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLR----NFLGRTDVAGPSSQVTADEIFLASEV---- 182
H+D K+ N+LV ++ +AD GL + D+A P+ +V ++A EV
Sbjct: 133 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA-PNHRVGTKR-YMAPEVLDDS 190
Query: 183 ---KEFRRFSEKSDVYSFGVFLLELV 205
K F F +++D+Y+ G+ E+
Sbjct: 191 INMKHFESF-KRADIYAMGLVFWEIA 215
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 3 ELSLATKNFSDKNLIGEGKFGEVY----KGLLQDGMLVAIKKRPGAPTQE----FIDEVC 54
++ L ++F ++G+G FG+V+ K Q + A+KK + +++
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 55 FLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXX 114
+ +H L + Q F + EY+ G + H+ + + F I
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILG 130
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL--RNFLG--RTDVAGPSSQ 170
+V++D K N+L+D+D K+AD G+ N LG +T+ +
Sbjct: 131 LQFLHSKG-------IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPD 183
Query: 171 VTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
A EI L ++++ D +SFGV L E++ G+
Sbjct: 184 YIAPEILLG------QKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 92/206 (44%), Gaps = 21/206 (10%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI--QHRNLVTLLGYCQEN 74
IG+G+FGEV++G + G VA+K + + E ++ +H N++ + ++
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 69
Query: 75 NLQF----LIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV 130
N + L+ +Y +GS+ +L + ++ + P +
Sbjct: 70 NGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI 129
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLR----NFLGRTDVAGPSSQVTADEIFLASEV---- 182
H+D K+ N+LV ++ +AD GL + D+A P+ +V ++A EV
Sbjct: 130 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA-PNHRVGTKR-YMAPEVLDDS 187
Query: 183 ---KEFRRFSEKSDVYSFGVFLLELV 205
K F F +++D+Y+ G+ E+
Sbjct: 188 INMKHFESF-KRADIYAMGLVFWEIA 212
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 92/206 (44%), Gaps = 21/206 (10%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI--QHRNLVTLLGYCQEN 74
IG+G+FGEV++G + G VA+K + + E ++ +H N++ + ++
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 75
Query: 75 NLQF----LIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV 130
N + L+ +Y +GS+ +L + ++ + P +
Sbjct: 76 NGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI 135
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLR----NFLGRTDVAGPSSQVTADEIFLASEV---- 182
H+D K+ N+LV ++ +AD GL + D+A P+ +V ++A EV
Sbjct: 136 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA-PNHRVGTKR-YMAPEVLDDS 193
Query: 183 ---KEFRRFSEKSDVYSFGVFLLELV 205
K F F +++D+Y+ G+ E+
Sbjct: 194 INMKHFESF-KRADIYAMGLVFWEIA 218
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 22/203 (10%)
Query: 17 IGEGKFGEVYKGLLQ----DGMLVAIKK-RPGAPTQ-----EFIDEVCFLASIQHRNLVT 66
+G+G FG V +G + VA+K +P +Q +FI EV + S+ HRNL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 67 LLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXX 126
L G ++ ++ E P GS+ ++ + + F
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLL------DRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 128
Query: 127 XPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTD---VAGPSSQVTADEIFLASEVK 183
R +H+D N+L+ + K+ D GL L + D V +V + A E
Sbjct: 129 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPF--AWCAPESL 186
Query: 184 EFRRFSEKSDVYSFGVFLLELVS 206
+ R FS SD + FGV L E+ +
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 92/206 (44%), Gaps = 21/206 (10%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI--QHRNLVTLLGYCQEN 74
IG+G+FGEV++G + G VA+K + + E ++ +H N++ + ++
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 70
Query: 75 NLQF----LIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV 130
N + L+ +Y +GS+ +L + ++ + P +
Sbjct: 71 NGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI 130
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLR----NFLGRTDVAGPSSQVTADEIFLASEV---- 182
H+D K+ N+LV ++ +AD GL + D+A P+ +V ++A EV
Sbjct: 131 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA-PNHRVGTKR-YMAPEVLDDS 188
Query: 183 ---KEFRRFSEKSDVYSFGVFLLELV 205
K F F +++D+Y+ G+ E+
Sbjct: 189 INMKHFESF-KRADIYAMGLVFWEIA 213
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 22/203 (10%)
Query: 17 IGEGKFGEVYKGLLQ----DGMLVAIKK-RPGAPTQ-----EFIDEVCFLASIQHRNLVT 66
+G+G FG V +G + VA+K +P +Q +FI EV + S+ HRNL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 67 LLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXX 126
L G ++ ++ E P GS+ ++ + + F
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLL------DRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 128
Query: 127 XPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTD---VAGPSSQVTADEIFLASEVK 183
R +H+D N+L+ + K+ D GL L + D V +V + A E
Sbjct: 129 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF--AWCAPESL 186
Query: 184 EFRRFSEKSDVYSFGVFLLELVS 206
+ R FS SD + FGV L E+ +
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 86/215 (40%), Gaps = 21/215 (9%)
Query: 9 KNFSDKNLIGEGKFGEVYKGLLQ------DGMLVAIKKRPGAPTQE----FIDEVCFLAS 58
KN + +G G FGEVY+G + + VA+K P +++ F+ E ++
Sbjct: 45 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISK 104
Query: 59 IQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYG----PSQVSRQKLEFKHRLSIXX 114
H+N+V +G ++ +F++ E + G + L PSQ S L L +
Sbjct: 105 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS--SLAMLDLLHVAR 162
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLV---DEDFIAKVADAGLRNFLGRTDVAGPSSQV 171
+H+D N L+ +AK+ D G+ + R
Sbjct: 163 DIACGCQYLEEN--HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA 220
Query: 172 TADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVS 206
++ E F+ K+D +SFGV L E+ S
Sbjct: 221 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 22/203 (10%)
Query: 17 IGEGKFGEVYKGLLQ----DGMLVAIKK-RPGAPTQ-----EFIDEVCFLASIQHRNLVT 66
+G+G FG V +G + VA+K +P +Q +FI EV + S+ HRNL+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 67 LLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXX 126
L G ++ ++ E P GS+ ++ + + F
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLL------DRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 132
Query: 127 XPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTD---VAGPSSQVTADEIFLASEVK 183
R +H+D N+L+ + K+ D GL L + D V +V + A E
Sbjct: 133 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF--AWCAPESL 190
Query: 184 EFRRFSEKSDVYSFGVFLLELVS 206
+ R FS SD + FGV L E+ +
Sbjct: 191 KTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 22/203 (10%)
Query: 17 IGEGKFGEVYKGLLQ----DGMLVAIKK-RPGAPTQ-----EFIDEVCFLASIQHRNLVT 66
+G+G FG V +G + VA+K +P +Q +FI EV + S+ HRNL+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 67 LLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXX 126
L G ++ ++ E P GS+ ++ + + F
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLL------DRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 132
Query: 127 XPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTD---VAGPSSQVTADEIFLASEVK 183
R +H+D N+L+ + K+ D GL L + D V +V + A E
Sbjct: 133 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF--AWCAPESL 190
Query: 184 EFRRFSEKSDVYSFGVFLLELVS 206
+ R FS SD + FGV L E+ +
Sbjct: 191 KTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 22/203 (10%)
Query: 17 IGEGKFGEVYKGLLQ----DGMLVAIKK-RPGAPTQ-----EFIDEVCFLASIQHRNLVT 66
+G+G FG V +G + VA+K +P +Q +FI EV + S+ HRNL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 67 LLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXX 126
L G ++ ++ E P GS+ ++ + + F
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLL------DRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 128
Query: 127 XPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTD---VAGPSSQVTADEIFLASEVK 183
R +H+D N+L+ + K+ D GL L + D V +V + A E
Sbjct: 129 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF--AWCAPESL 186
Query: 184 EFRRFSEKSDVYSFGVFLLELVS 206
+ R FS SD + FGV L E+ +
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 22/203 (10%)
Query: 17 IGEGKFGEVYKGLLQ----DGMLVAIKK-RPGAPTQ-----EFIDEVCFLASIQHRNLVT 66
+G+G FG V +G + VA+K +P +Q +FI EV + S+ HRNL+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 67 LLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXX 126
L G ++ ++ E P GS+ ++ + + F
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLL------DRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 138
Query: 127 XPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTD---VAGPSSQVTADEIFLASEVK 183
R +H+D N+L+ + K+ D GL L + D V +V + A E
Sbjct: 139 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPF--AWCAPESL 196
Query: 184 EFRRFSEKSDVYSFGVFLLELVS 206
+ R FS SD + FGV L E+ +
Sbjct: 197 KTRTFSHASDTWMFGVTLWEMFT 219
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 22/203 (10%)
Query: 17 IGEGKFGEVYKGLLQ----DGMLVAIKK-RPGAPTQ-----EFIDEVCFLASIQHRNLVT 66
+G+G FG V +G + VA+K +P +Q +FI EV + S+ HRNL+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 67 LLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXX 126
L G ++ ++ E P GS+ ++ + + F
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLL------DRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 138
Query: 127 XPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTD---VAGPSSQVTADEIFLASEVK 183
R +H+D N+L+ + K+ D GL L + D V +V + A E
Sbjct: 139 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF--AWCAPESL 196
Query: 184 EFRRFSEKSDVYSFGVFLLELVS 206
+ R FS SD + FGV L E+ +
Sbjct: 197 KTRTFSHASDTWMFGVTLWEMFT 219
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 81/206 (39%), Gaps = 32/206 (15%)
Query: 17 IGEGKFGEVYKGLLQD-GMLVAIKKRPGAPTQEFID-----EVCFLASIQHRNLVTLLGY 70
IGEG +G V+K +D G +VAIKK + I E+ L ++H NLV LL
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 71 CQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV 130
+ L++EY + + ++ R + L
Sbjct: 71 FRRKRRLHLVFEYCDHTVL-------HELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNC 123
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFR---- 186
+H+D K N+L+ + + K+ D G L GPS DE+ + +R
Sbjct: 124 IHRDVKPENILITKHSVIKLCDFGFARLL-----TGPSDYYD-DEV----ATRWYRSPEL 173
Query: 187 -----RFSEKSDVYSFGVFLLELVSG 207
++ DV++ G EL+SG
Sbjct: 174 LVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 88/220 (40%), Gaps = 44/220 (20%)
Query: 9 KNFSDKNLIGEGKFGEVYKGLLQD---GMLVAIKKRPGAPTQ----EFIDEVCFLASIQH 61
K F K +G G F EV L ++ G L A+K P + +E+ L I+H
Sbjct: 22 KIFEFKETLGTGAFSEVV--LAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKH 79
Query: 62 RNLVTLLGYCQENNLQFLIYEYIPNGS-----VSIHLYGPSQVS---RQKLE---FKHRL 110
N+V L + N +L+ + + G V Y S RQ L+ + HR+
Sbjct: 80 ENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRM 139
Query: 111 SIXXXXXXXXXXXXXXXPRVVHKDFKTANVLV---DEDFIAKVADAGLRNFLGRTDVAGP 167
I VH+D K N+L DE+ ++D GL G+ DV
Sbjct: 140 GI------------------VHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMST 181
Query: 168 SSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ ++A EV + +S+ D +S GV L+ G
Sbjct: 182 ACGTPG---YVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 83/201 (41%), Gaps = 14/201 (6%)
Query: 17 IGEGKFGEVYKGLLQ-DGMLVAIKK-----RPGAPTQEFIDEVCFLASIQHRNLVTLLGY 70
IG G +G K + DG ++ K+ A Q + EV L ++H N+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 71 C--QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
+ N +++ EY G ++ + ++ RQ L+ + L +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTK-ERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 129 ---RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEF 185
V+H+D K ANV +D K+ D GL L + + + +++ E
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDE--DFAKEFVGTPYYMSPEQMNR 190
Query: 186 RRFSEKSDVYSFGVFLLELVS 206
++EKSD++S G L EL +
Sbjct: 191 MSYNEKSDIWSLGCLLYELCA 211
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 28/159 (17%)
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLR-------NFLGRTDVAGPSSQVTADEIFLASE 181
+ +H+D N+L+ E+ + K+ D GL +++ + D P + + IF
Sbjct: 219 KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIF---- 274
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDE 241
+ +S KSDV+S+GV L E+ S VQ DF + L+ E
Sbjct: 275 ---DKIYSTKSDVWSYGVLLWEIFS-----------LGGSPYPGVQMDEDFCSRLR---E 317
Query: 242 RLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTEL 280
+ E Q+++ C + RP +++V +L
Sbjct: 318 GMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 85/218 (38%), Gaps = 26/218 (11%)
Query: 1 MEELSLATKNFSDKNLIGEGKFGEVYKGL-LQDGMLVAIK-------KRPGAPTQEFIDE 52
M + +F +G+GKFG VY Q+ ++A+K ++ G Q E
Sbjct: 7 MPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ-LRRE 65
Query: 53 VCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSI 112
+ + ++H N++ + Y + +L+ E+ P G + L + Q+ S
Sbjct: 66 IEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQR-------SA 118
Query: 113 XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPS---S 169
+V+H+D K N+L+ K+AD G V PS
Sbjct: 119 TFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGW-------SVHAPSLRRR 171
Query: 170 QVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ +L E+ E + EK D++ GV E + G
Sbjct: 172 XMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 18/215 (8%)
Query: 8 TKNFSDKNLIGEGKFGEVYKGLLQD-GMLVAIKKRPGAPTQEF----IDEVCFLASIQHR 62
+ +F K+L+GEG +G V + G +VAIKK F + E+ L +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 63 NLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXX 122
N++T+ + ++ + YI + L+ +S Q L H
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLH--RVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 123 XXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRT--DVAGPSSQ------VTAD 174
V+H+D K +N+L++ + KV D GL + + D + P+ Q A
Sbjct: 128 LHGS--NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVAT 185
Query: 175 EIFLASEVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
+ A EV ++S DV+S G L EL R
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 18/215 (8%)
Query: 8 TKNFSDKNLIGEGKFGEVYKGLLQD-GMLVAIKKRPGAPTQEF----IDEVCFLASIQHR 62
+ +F K+L+GEG +G V + G +VAIKK F + E+ L +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 63 NLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXX 122
N++T+ + ++ + YI + L+ +S Q L H
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLH--RVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 123 XXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRT--DVAGPSSQ------VTAD 174
V+H+D K +N+L++ + KV D GL + + D + P+ Q A
Sbjct: 128 LHGS--NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVAT 185
Query: 175 EIFLASEVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
+ A EV ++S DV+S G L EL R
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 85/218 (38%), Gaps = 26/218 (11%)
Query: 1 MEELSLATKNFSDKNLIGEGKFGEVYKGL-LQDGMLVAIK-------KRPGAPTQEFIDE 52
M + +F +G+GKFG VY Q+ ++A+K ++ G Q E
Sbjct: 6 MPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ-LRRE 64
Query: 53 VCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSI 112
+ + ++H N++ + Y + +L+ E+ P G + L + Q+ S
Sbjct: 65 IEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQR-------SA 117
Query: 113 XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPS---S 169
+V+H+D K N+L+ K+AD G V PS
Sbjct: 118 TFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGW-------SVHAPSLRRR 170
Query: 170 QVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ +L E+ E + EK D++ GV E + G
Sbjct: 171 XMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 18/215 (8%)
Query: 8 TKNFSDKNLIGEGKFGEVYKGLLQD-GMLVAIKKRPGAPTQEF----IDEVCFLASIQHR 62
+ +F K+L+GEG +G V + G +VAIKK F + E+ L +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 63 NLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXX 122
N++T+ + ++ + YI + L+ +S Q L H
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLH--RVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 123 XXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRT--DVAGPSSQ------VTAD 174
V+H+D K +N+L++ + KV D GL + + D + P+ Q A
Sbjct: 128 LHGS--NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVAT 185
Query: 175 EIFLASEVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
+ A EV ++S DV+S G L EL R
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 117/294 (39%), Gaps = 49/294 (16%)
Query: 17 IGEGKFGEVYK----GLLQDGML--VAIKK-RPGAPTQE---FIDEVCFLASI-QHRNLV 65
+G G FG+V + G+ + VA+K + GA E + E+ L I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 66 TLLGYCQENNLQFL-IYEYIPNGSVSIHL------YGPSQ-VSRQKLEFKHRLSIXXXXX 117
LLG C + + I E+ G++S +L + P + + + L +H +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 118 XXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLR-------NFLGRTDVAGPSSQ 170
+ +H+D N+L+ E + K+ D GL +++ + D P
Sbjct: 155 KGMEFLASR--KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 212
Query: 171 VTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSR 230
+ + IF R ++ +SDV+SFGV L E+ S V+
Sbjct: 213 MAPETIF-------DRVYTIQSDVWSFGVLLWEIFS-----------LGASPYPGVKIDE 254
Query: 231 DFSNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
+F LK +T E Q ++ C +RP+ S++V L L
Sbjct: 255 EFCRRLKEGTRMRAPDYTT---PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 305
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 14/84 (16%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFLG-----RTDVAGPSSQVTADEIFLASEVKE 184
VVH+D K NVL+D AK+AD GL N + RT P+ + A EV
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPN--------YAAPEVIS 183
Query: 185 FRRFS-EKSDVYSFGVFLLELVSG 207
R ++ + D++S GV L L+ G
Sbjct: 184 GRLYAGPEVDIWSCGVILYALLCG 207
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 84/201 (41%), Gaps = 14/201 (6%)
Query: 17 IGEGKFGEVYKGLLQ-DGMLVAIKK-----RPGAPTQEFIDEVCFLASIQHRNLVTLLGY 70
IG G +G K + DG ++ K+ A Q + EV L ++H N+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 71 C--QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
+ N +++ EY G ++ + ++ RQ L+ + L +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTK-ERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 129 ---RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEF 185
V+H+D K ANV +D K+ D GL L D + + V +++ E
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH-DTSFAKTFV-GTPYYMSPEQMNR 190
Query: 186 RRFSEKSDVYSFGVFLLELVS 206
++EKSD++S G L EL +
Sbjct: 191 MSYNEKSDIWSLGCLLYELCA 211
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 85/218 (38%), Gaps = 26/218 (11%)
Query: 1 MEELSLATKNFSDKNLIGEGKFGEVYKGL-LQDGMLVAIK-------KRPGAPTQEFIDE 52
M + +F +G+GKFG VY Q+ ++A+K ++ G Q E
Sbjct: 6 MPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ-LRRE 64
Query: 53 VCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSI 112
+ + ++H N++ + Y + +L+ E+ P G + L + Q+ S
Sbjct: 65 IEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQR-------SA 117
Query: 113 XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPS---S 169
+V+H+D K N+L+ K+AD G V PS
Sbjct: 118 TFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGW-------SVHAPSLRRR 170
Query: 170 QVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ +L E+ E + EK D++ GV E + G
Sbjct: 171 XMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 88/218 (40%), Gaps = 18/218 (8%)
Query: 1 MEELSLATKNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKKRPGAPT------QEFIDEV 53
+E + F D ++G G FGEV+ ++ G L A KK Q + E
Sbjct: 177 LEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 54 CFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGS-VSIHLYGPSQVSRQKLEFKHRLSI 112
LA + R +V+L Y E + I NG + H+Y V F+ +I
Sbjct: 237 KILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIY---NVDEDNPGFQEPRAI 292
Query: 113 XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFL--GRTDVAGPSSQ 170
++++D K NVL+D+D +++D GL L G+T G
Sbjct: 293 FYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG---- 348
Query: 171 VTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
F+A E+ + D ++ GV L E+++ R
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 24/200 (12%)
Query: 17 IGEGKFGEVYKGLLQD-GMLVAIKK---RPGAPTQEFIDEVCFLASIQHRNLVTLLGYCQ 72
IGEG G V ++ G LVA+KK R + +EV + QH N+V +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 73 ENNLQFLIYEYIPNGS----VSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
+ +++ E++ G+ V+ Q++ L LS+
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG----------- 136
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQ-VTADEIFLASEVKEFRR 187
V+H+D K+ ++L+ D K++D G F + P + + ++A E+
Sbjct: 137 -VIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELISRLP 192
Query: 188 FSEKSDVYSFGVFLLELVSG 207
+ + D++S G+ ++E+V G
Sbjct: 193 YGPEVDIWSLGIMVIEMVDG 212
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 88/218 (40%), Gaps = 18/218 (8%)
Query: 1 MEELSLATKNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKKRPGAPT------QEFIDEV 53
+E + F D ++G G FGEV+ ++ G L A KK Q + E
Sbjct: 177 LEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 54 CFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGS-VSIHLYGPSQVSRQKLEFKHRLSI 112
LA + R +V+L Y E + I NG + H+Y V F+ +I
Sbjct: 237 KILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIY---NVDEDNPGFQEPRAI 292
Query: 113 XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFL--GRTDVAGPSSQ 170
++++D K NVL+D+D +++D GL L G+T G
Sbjct: 293 FYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG---- 348
Query: 171 VTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
F+A E+ + D ++ GV L E+++ R
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 24/200 (12%)
Query: 17 IGEGKFGEVYKGLLQD-GMLVAIKK---RPGAPTQEFIDEVCFLASIQHRNLVTLLGYCQ 72
IGEG G V ++ G LVA+KK R + +EV + QH N+V +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 73 ENNLQFLIYEYIPNGS----VSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
+ +++ E++ G+ V+ Q++ L LS+
Sbjct: 92 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG----------- 140
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQ-VTADEIFLASEVKEFRR 187
V+H+D K+ ++L+ D K++D G F + P + + ++A E+
Sbjct: 141 -VIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELISRLP 196
Query: 188 FSEKSDVYSFGVFLLELVSG 207
+ + D++S G+ ++E+V G
Sbjct: 197 YGPEVDIWSLGIMVIEMVDG 216
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 24/200 (12%)
Query: 17 IGEGKFGEVYKGLLQD-GMLVAIKK---RPGAPTQEFIDEVCFLASIQHRNLVTLLGYCQ 72
IGEG G V ++ G LVA+KK R + +EV + QH N+V +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 73 ENNLQFLIYEYIPNGS----VSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
+ +++ E++ G+ V+ Q++ L LS+
Sbjct: 97 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG----------- 145
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQ-VTADEIFLASEVKEFRR 187
V+H+D K+ ++L+ D K++D G F + P + + ++A E+
Sbjct: 146 -VIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELISRLP 201
Query: 188 FSEKSDVYSFGVFLLELVSG 207
+ + D++S G+ ++E+V G
Sbjct: 202 YGPEVDIWSLGIMVIEMVDG 221
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 84/201 (41%), Gaps = 14/201 (6%)
Query: 17 IGEGKFGEVYKGLLQ-DGMLVAIKK-----RPGAPTQEFIDEVCFLASIQHRNLVTLLGY 70
IG G +G K + DG ++ K+ A Q + EV L ++H N+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 71 C--QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
+ N +++ EY G ++ + ++ RQ L+ + L +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTK-ERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 129 ---RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEF 185
V+H+D K ANV +D K+ D GL L D + + V +++ E
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH-DTSFAKAFV-GTPYYMSPEQMNR 190
Query: 186 RRFSEKSDVYSFGVFLLELVS 206
++EKSD++S G L EL +
Sbjct: 191 MSYNEKSDIWSLGCLLYELCA 211
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 88/218 (40%), Gaps = 18/218 (8%)
Query: 1 MEELSLATKNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKKRPGAPT------QEFIDEV 53
+E + F D ++G G FGEV+ ++ G L A KK Q + E
Sbjct: 177 LEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 54 CFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGS-VSIHLYGPSQVSRQKLEFKHRLSI 112
LA + R +V+L Y E + I NG + H+Y V F+ +I
Sbjct: 237 KILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIY---NVDEDNPGFQEPRAI 292
Query: 113 XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFL--GRTDVAGPSSQ 170
++++D K NVL+D+D +++D GL L G+T G
Sbjct: 293 FYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG---- 348
Query: 171 VTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
F+A E+ + D ++ GV L E+++ R
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 103/275 (37%), Gaps = 43/275 (15%)
Query: 17 IGEGKFGEVY-------KGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASIQHRNLVTLLG 69
IG+G FG+V K + + K + E+ + ++H LV L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 70 YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPR 129
Q+ F++ + + G + HL +Q + FK R
Sbjct: 83 SFQDEEDMFMVVDLLLGGDLRYHL-------QQNVHFKEETVKLFICELVMALDYLQNQR 135
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFLGR----TDVAGPSSQVTADEIFLASEVKEF 185
++H+D K N+L+DE + D + L R T +AG ++A E+
Sbjct: 136 IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKP-------YMAPEMFSS 188
Query: 186 RR---FSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDER 242
R+ +S D +S GV EL+ GR V + +
Sbjct: 189 RKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTV------------ 236
Query: 243 LWSTFTNEGMEEFIQLIVRCLDPSSERRPS-MSDV 276
T+ + +E + L+ + L+P+ ++R S +SDV
Sbjct: 237 --VTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDV 269
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 24/200 (12%)
Query: 17 IGEGKFGEVYKGLLQD-GMLVAIKK---RPGAPTQEFIDEVCFLASIQHRNLVTLLGYCQ 72
IGEG G V ++ G LVA+KK R + +EV + QH N+V +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 73 ENNLQFLIYEYIPNGS----VSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
+ +++ E++ G+ V+ Q++ L LS+
Sbjct: 99 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG----------- 147
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQ-VTADEIFLASEVKEFRR 187
V+H+D K+ ++L+ D K++D G F + P + + ++A E+
Sbjct: 148 -VIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELISRLP 203
Query: 188 FSEKSDVYSFGVFLLELVSG 207
+ + D++S G+ ++E+V G
Sbjct: 204 YGPEVDIWSLGIMVIEMVDG 223
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 92/223 (41%), Gaps = 51/223 (22%)
Query: 14 KNLIGEGKFGEVYKGLLQD-GMLVAIK--KRPGAPT--QEFIDEVCFLASIQHRNLVTL- 67
K +G G FG V + + QD G VAIK ++ +P + + E+ + + H N+V+
Sbjct: 19 KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAR 78
Query: 68 -----LGYCQENNLQFLIYEYIPNGSVSIHLY----------GP-----SQVSRQKLEFK 107
L N+L L EY G + +L GP S +S L +
Sbjct: 79 EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDIS-SALRYL 137
Query: 108 HRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVD---EDFIAKVADAGLRNFLGRTDV 164
H R++H+D K N+++ + I K+ D G L + ++
Sbjct: 138 HE------------------NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL 179
Query: 165 AGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
++ +LA E+ E ++++ D +SFG E ++G
Sbjct: 180 C---TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 88/218 (40%), Gaps = 18/218 (8%)
Query: 1 MEELSLATKNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKKRPGAPT------QEFIDEV 53
+E + F D ++G G FGEV+ ++ G L A KK Q + E
Sbjct: 177 LEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 54 CFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGS-VSIHLYGPSQVSRQKLEFKHRLSI 112
LA + R +V+L Y E + I NG + H+Y V F+ +I
Sbjct: 237 KILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIY---NVDEDNPGFQEPRAI 292
Query: 113 XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFL--GRTDVAGPSSQ 170
++++D K NVL+D+D +++D GL L G+T G
Sbjct: 293 FYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG---- 348
Query: 171 VTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
F+A E+ + D ++ GV L E+++ R
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 92/223 (41%), Gaps = 51/223 (22%)
Query: 14 KNLIGEGKFGEVYKGLLQD-GMLVAIK--KRPGAPT--QEFIDEVCFLASIQHRNLVTL- 67
K +G G FG V + + QD G VAIK ++ +P + + E+ + + H N+V+
Sbjct: 20 KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAR 79
Query: 68 -----LGYCQENNLQFLIYEYIPNGSVSIHLY----------GP-----SQVSRQKLEFK 107
L N+L L EY G + +L GP S +S L +
Sbjct: 80 EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDIS-SALRYL 138
Query: 108 HRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVD---EDFIAKVADAGLRNFLGRTDV 164
H R++H+D K N+++ + I K+ D G L + ++
Sbjct: 139 HE------------------NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL 180
Query: 165 AGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
++ +LA E+ E ++++ D +SFG E ++G
Sbjct: 181 C---TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 29/210 (13%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI--QHRNLVTLLG---YC 71
+G+G++GEV++GL G VA+K Q + E ++ +H N++ +
Sbjct: 16 VGKGRYGEVWRGLWH-GESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTS 74
Query: 72 QENNLQ-FLIYEYIPNGSVSIHLYGPSQVSRQKLE--FKHRLSIXXXXXXXXXXX----X 124
+ ++ Q +LI Y +GS+ L RQ LE RL++
Sbjct: 75 RNSSTQLWLITHYHEHGSLYDFL------QRQTLEPHLALRLAVSAACGLAHLHVEIFGT 128
Query: 125 XXXPRVVHKDFKTANVLVDEDFIAKVADAGLR--NFLGRTDVAGPSSQVTADEIFLASEV 182
P + H+DFK+ NVLV + +AD GL + G + ++ + ++A EV
Sbjct: 129 QGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEV 188
Query: 183 KE-------FRRFSEKSDVYSFGVFLLELV 205
+ F + + +D+++FG+ L E+
Sbjct: 189 LDEQIRTDCFESY-KWTDIWAFGLVLWEIA 217
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 118/294 (40%), Gaps = 49/294 (16%)
Query: 17 IGEGKFGEVYK----GLLQDGML--VAIKK-RPGAPTQE---FIDEVCFLASIQHR-NLV 65
+G G FG+V + G+ + VA+K + GA E + E+ L I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 66 TLLGYC-QENNLQFLIYEYIPNGSVSIHL------YGPSQ-VSRQKLEFKHRLSIXXXXX 117
LLG C + +I E+ G++S +L + P + + + L +H I
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEH--LIXYSFQ 152
Query: 118 XXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLR-------NFLGRTDVAGPSSQ 170
+ +H+D N+L+ E + K+ D GL +++ + D P
Sbjct: 153 VAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKW 212
Query: 171 VTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSR 230
+ + IF R ++ +SDV+SFGV L E+ S V+
Sbjct: 213 MAPETIF-------DRVYTIQSDVWSFGVLLWEIFS-----------LGASPYPGVKIDE 254
Query: 231 DFSNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
+F LK +T E Q ++ C +RP+ S++V L L
Sbjct: 255 EFXRRLKEGTRMRAPDYTT---PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 305
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 107/276 (38%), Gaps = 35/276 (12%)
Query: 3 ELSLATKN-FSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKKRPGAPTQEF------IDEVC 54
E TKN F ++G+G FGEV ++ G + A KK ++ ++E
Sbjct: 177 ERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQ 236
Query: 55 FLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXX 114
L + R +V+L + + L+ + G + H+Y Q F ++
Sbjct: 237 ILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG-----FPEARAVFY 291
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTAD 174
R+V++D K N+L+D+ +++D GL V P Q
Sbjct: 292 AAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGL-------AVHVPEGQTIKG 344
Query: 175 EI----FLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSR 230
+ ++A EV + R++ D ++ G L E+++G+ VE
Sbjct: 345 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVE------ 398
Query: 231 DFSNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPS 266
L+K + E F+ + QL+ C DP+
Sbjct: 399 ---RLVKEVPEEYSERFSPQARSLCSQLL--CKDPA 429
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 106/271 (39%), Gaps = 35/271 (12%)
Query: 8 TKN-FSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKKRPGAPTQEF------IDEVCFLASI 59
TKN F ++G+G FGEV ++ G + A KK ++ ++E L +
Sbjct: 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV 241
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
R +V+L + + L+ + G + H+Y Q F ++
Sbjct: 242 NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG-----FPEARAVFYAAEIC 296
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI--- 176
R+V++D K N+L+D+ +++D GL V P Q +
Sbjct: 297 CGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGL-------AVHVPEGQTIKGRVGTV 349
Query: 177 -FLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNL 235
++A EV + R++ D ++ G L E+++G+ VE L
Sbjct: 350 GYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVE---------RL 400
Query: 236 LKILDERLWSTFTNEGMEEFIQLIVRCLDPS 266
+K + E F+ + QL+ C DP+
Sbjct: 401 VKEVPEEYSERFSPQARSLCSQLL--CKDPA 429
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 88/218 (40%), Gaps = 55/218 (25%)
Query: 17 IGEGKFGEVYKGL--LQDGMLVAIKK-----RPGAPTQEFIDEVCFLASIQHRNLVTLLG 69
+GEG + VYKG L D LVA+K+ GAP I EV L ++H N+VTL
Sbjct: 10 LGEGTYATVYKGKSKLTDN-LVALKEIRLEHEEGAPCTA-IREVSLLKDLKHANIVTLHD 67
Query: 70 YCQENNLQFLIYEY---------------IPNGSVSIHLYGPSQVSRQKLEFKHRLSIXX 114
L++EY I +V + L+ Q+ R L + HR
Sbjct: 68 IIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLF---QLLR-GLAYCHR----- 118
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT-- 172
+V+H+D K N+L++E K+AD GL + VT
Sbjct: 119 -------------QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLW 165
Query: 173 --ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
+I L S +S + D++ G E+ +GR
Sbjct: 166 YRPPDILLGST-----DYSTQIDMWGVGCIFYEMATGR 198
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 93/225 (41%), Gaps = 35/225 (15%)
Query: 10 NFSDKNLIGEGKFGEVYKGL-LQDGMLVAIKK--RPGAPTQEFIDEVCFLASIQH----- 61
+F + ++G+G FG+V K D AIKK + EV LAS+ H
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVR 66
Query: 62 --------RNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIX 113
RN V ++ + F+ EY N ++ L +++Q+ E+ RL
Sbjct: 67 YYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTL-YDLIHSENLNQQRDEY-WRL--- 121
Query: 114 XXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRT---------DV 164
++H++ K N+ +DE K+ D GL + R+ ++
Sbjct: 122 -FRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 165 AGPSSQVTA---DEIFLASEVKEFR-RFSEKSDVYSFGVFLLELV 205
G S +T+ ++A+EV + ++EK D YS G+ E +
Sbjct: 181 PGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 24/200 (12%)
Query: 17 IGEGKFGEVYKGLLQD-GMLVAIKK---RPGAPTQEFIDEVCFLASIQHRNLVTLLGYCQ 72
IGEG G V ++ G LVA+KK R + +EV + QH N+V +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 73 ENNLQFLIYEYIPNGS----VSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
+ +++ E++ G+ V+ Q++ L LS+
Sbjct: 142 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG----------- 190
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQ-VTADEIFLASEVKEFRR 187
V+H+D K+ ++L+ D K++D G F + P + + ++A E+
Sbjct: 191 -VIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELISRLP 246
Query: 188 FSEKSDVYSFGVFLLELVSG 207
+ + D++S G+ ++E+V G
Sbjct: 247 YGPEVDIWSLGIMVIEMVDG 266
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 89 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ DAGL TD + A + A
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDAGLAR---HTD--DEMTGYVATRWYRAP 191
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 24/200 (12%)
Query: 17 IGEGKFGEVYKGLLQD-GMLVAIKK---RPGAPTQEFIDEVCFLASIQHRNLVTLLGYCQ 72
IGEG G V ++ G LVA+KK R + +EV + QH N+V +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 73 ENNLQFLIYEYIPNGS----VSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
+ +++ E++ G+ V+ Q++ L LS+
Sbjct: 219 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG----------- 267
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQ-VTADEIFLASEVKEFRR 187
V+H+D K+ ++L+ D K++D G F + P + + ++A E+
Sbjct: 268 -VIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELISRLP 323
Query: 188 FSEKSDVYSFGVFLLELVSG 207
+ + D++S G+ ++E+V G
Sbjct: 324 YGPEVDIWSLGIMVIEMVDG 343
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 19/208 (9%)
Query: 9 KNFSDKNLIGEGKFGEV---YKGLLQDGMLVAIKK--RP---GAPTQEFIDEVCFLASIQ 60
K + + IG G G V Y +L+ VAIKK RP + E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVN 81
Query: 61 HRNLVTLLG-YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
H+N++ LL + + +L+ YI + +L SQV ++E H
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL---SQVI--QMELDHERMSYLLYQML 136
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
++H+D K +N++V D K+ D GL G + + P + A
Sbjct: 137 VGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTP---YVVTRYYRA 193
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSG 207
EV + E D++S GV + E++ G
Sbjct: 194 PEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 19/208 (9%)
Query: 9 KNFSDKNLIGEGKFGEV---YKGLLQDGMLVAIKK--RP---GAPTQEFIDEVCFLASIQ 60
K + + IG G G V Y +L+ VAIKK RP + E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVN 81
Query: 61 HRNLVTLLG-YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
H+N++ LL + + +L+ YI + +L SQV ++E H
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL---SQVI--QMELDHERMSYLLYQML 136
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
++H+D K +N++V D K+ D GL G + + P + A
Sbjct: 137 VGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTP---YVVTRYYRA 193
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSG 207
EV + E D++S GV + E++ G
Sbjct: 194 PEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 24/218 (11%)
Query: 2 EELSLATKNFSD----KNLIGEGKFGE----VYKGLLQDGMLVAIKKRPGAPTQEFIDEV 53
E L + FSD K IG G + E V+K + + I K P++E E+
Sbjct: 16 ENLYFQSMVFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEI--EI 73
Query: 54 CFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIX 113
L QH N++TL + +L+ E + G + ++ RQK F R +
Sbjct: 74 -LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELL------DKILRQKF-FSEREASF 125
Query: 114 XXXXXXXXXXXXXXPRVVHKDFKTANVL-VDEDF---IAKVADAGLRNFLGRTDVAGPSS 169
VVH+D K +N+L VDE ++ D G L + +
Sbjct: 126 VLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTP 185
Query: 170 QVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
TA+ F+A EV + + + E D++S G+ L +++G
Sbjct: 186 CYTAN--FVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 14/84 (16%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFLG-----RTDVAGPSSQVTADEIFLASEVKE 184
VVH+D K NVL+D AK+AD GL N + R P+ + A EV
Sbjct: 137 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPN--------YAAPEVIS 188
Query: 185 FRRFS-EKSDVYSFGVFLLELVSG 207
R ++ + D++S GV L L+ G
Sbjct: 189 GRLYAGPEVDIWSSGVILYALLCG 212
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 84/198 (42%), Gaps = 14/198 (7%)
Query: 47 QEFIDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEF 106
+E +E+ L S+ H N++ L ++ +L+ E+ G + + ++R K +
Sbjct: 91 EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQI-----INRHKFDE 145
Query: 107 KHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDED---FIAKVADAGLRNFLGRTD 163
+I +VH+D K N+L++ K+ D GL +F + D
Sbjct: 146 CDAANIMKQILSGICYLHK--HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSK-D 202
Query: 164 VAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXV 223
TA ++A EV + ++++EK DV+S GV + L+ G V
Sbjct: 203 YKLRDRLGTA--YYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKV 259
Query: 224 ELVQNSRDFSNLLKILDE 241
E + DF++ I DE
Sbjct: 260 EKGKYYFDFNDWKNISDE 277
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 111/287 (38%), Gaps = 27/287 (9%)
Query: 20 GKFGEVYKGLLQDGMLVAIKKRPGAPTQEFIDE--VCFLASIQHRNLVTLLGYCQENNLQ 77
G+FG V+K L + VA+K P Q + +E V L ++H N++ +G +
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSV 93
Query: 78 ----FLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLS--IXXXXXXXXXXXXXXXPRVV 131
+LI + GS+S L + ++ + P +
Sbjct: 94 DVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAIS 153
Query: 132 HKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKE----FRR 187
H+D K+ NVL+ + A +AD GL AG + ++A EV E F+R
Sbjct: 154 HRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQR 213
Query: 188 FS-EKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDER---- 242
+ + D+Y+ G+ L EL S A E + ++ +++ +
Sbjct: 214 DAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRP 273
Query: 243 ----LWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDV---VTELDR 282
W + GM + I C D +E R S V +T++ R
Sbjct: 274 VLRDYWQ--KHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 70/159 (44%), Gaps = 14/159 (8%)
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
++E L ++ LV L ++N+ +++ EY+P G + HL + S F
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPS 168
+ ++++D K N+L+D+ KVAD G + GRT +
Sbjct: 149 QIVLTFEYLHSLD-------LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGT 201
Query: 169 SQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A EI L+ + +++ D ++ GV + E+ +G
Sbjct: 202 PEYLAPEIILS------KGYNKAVDWWALGVLIYEMAAG 234
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 85/209 (40%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 95
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 96 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 145
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL A + A + A
Sbjct: 146 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH-----TADEMTGYVATRWYRAP 198
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 22/88 (25%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFL----------GRTDVAGPSSQVTADEIFLA 179
VVH+D K NVL+D AK+AD GL N + G + A P +V + ++
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAP--EVISGRLYAG 189
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSG 207
EV D++S GV L L+ G
Sbjct: 190 PEV----------DIWSCGVILYALLCG 207
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 85/209 (40%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 95
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 96 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 145
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL A + A + A
Sbjct: 146 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH-----TADEMTGYVATRWYRAP 198
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 85/209 (40%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 95
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 96 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 145
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL A + A + A
Sbjct: 146 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH-----TADEMTGYVATRWYRAP 198
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 19/208 (9%)
Query: 9 KNFSDKNLIGEGKFGEV---YKGLLQDGMLVAIKK--RP---GAPTQEFIDEVCFLASIQ 60
K + + IG G G V Y +L+ VAIKK RP + E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 61 HRNLVTLLG-YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
H+N++ LL + + +L+ YI + +L SQV ++E H
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL---SQVI--QMELDHERMSYLLYQML 136
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
++H+D K +N++V D K+ D GL G + + P + A
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP---YVVTRYYRA 193
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSG 207
EV + E D++S G + E++ G
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 65/146 (44%), Gaps = 10/146 (6%)
Query: 64 LVTLLGYC-QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXX 122
+T L C Q + + + EY+ G + H+ QV R FK ++
Sbjct: 82 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI---QQVGR----FKEPHAVFYAAEIAIGL 134
Query: 123 XXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEV 182
++++D K NV++D + K+AD G+ V T D ++A E+
Sbjct: 135 FFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPD--YIAPEI 192
Query: 183 KEFRRFSEKSDVYSFGVFLLELVSGR 208
++ + + D ++FGV L E+++G+
Sbjct: 193 IAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 93/216 (43%), Gaps = 27/216 (12%)
Query: 7 ATKNFSDK----NLIGEGKFGEVY----KGLLQDGMLVAIKKR---PGAPTQEFIDEVCF 55
+T FSD+ ++G+G FGEV K Q+ + I KR + + EV
Sbjct: 20 STAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL 79
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
L + H N++ L + ++ +L+ E G + + +SR++ F +
Sbjct: 80 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI-----ISRKR--FSEVDAARII 132
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
++VH+D K N+L++ +K DA +R +S+ D+
Sbjct: 133 RQVLSGITYMHKNKIVHRDLKPENLLLE----SKSKDANIRIIDFGLSTHFEASKKMKDK 188
Query: 176 I----FLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
I ++A EV + EK DV+S GV L L+SG
Sbjct: 189 IGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 70/159 (44%), Gaps = 14/159 (8%)
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
++E L ++ LV L ++N+ +++ EY+P G + HL + S F
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAA 148
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPS 168
+ ++++D K N+L+D+ KVAD G + GRT +
Sbjct: 149 QIVLTFEYLHSLD-------LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGT 201
Query: 169 SQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A EI L+ + +++ D ++ GV + E+ +G
Sbjct: 202 PEYLAPEIILS------KGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 70/159 (44%), Gaps = 14/159 (8%)
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
++E L ++ LV L ++N+ +++ EY+P G + HL + S F
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAA 148
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPS 168
+ ++++D K N+L+D+ KVAD G + GRT +
Sbjct: 149 QIVLTFEYLHSLD-------LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGT 201
Query: 169 SQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A EI L+ + +++ D ++ GV + E+ +G
Sbjct: 202 PEYLAPEIILS------KGYNKAVDWWALGVLIYEMAAG 234
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 19/208 (9%)
Query: 9 KNFSDKNLIGEGKFGEV---YKGLLQDGMLVAIKK--RP---GAPTQEFIDEVCFLASIQ 60
K + + IG G G V Y +L+ VAIKK RP + E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 61 HRNLVTLLG-YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
H+N++ LL + + +L+ YI + +L SQV ++E H
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL---SQVI--QMELDHERMSYLLYQML 136
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
++H+D K +N++V D K+ D GL G + + P + A
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTP---YVVTRYYRA 193
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSG 207
EV + E D++S G + E++ G
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 89 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDGGLAR---HTD--DEMTGYVATRWYRAP 191
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 25/211 (11%)
Query: 9 KNFSDKNLIGEGKFGEV---YKGLLQDGMLVAIKK--RP---GAPTQEFIDEVCFLASIQ 60
K + + IG G G V Y +L+ VAIKK RP + E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 61 HRNLVTLLG-YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
H+N++ LL + + +L+ YI + L + ++E H
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYI-----VMELMDANLCQVIQMELDHERMSYLLYQML 136
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI--- 176
++H+D K +N++V D K+ D G L RT AG S +T + +
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG----LART--AGTSFMMTPEVVTRY 190
Query: 177 FLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A EV + E D++S G + E++ G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 67/175 (38%), Gaps = 34/175 (19%)
Query: 49 FIDEVCFLASIQHRNLVTLLGYCQENN----LQFLIYEYIPNGSVS--IHLYGPSQVSR- 101
F E A++ H +V + + L +++ EY+ ++ +H GP R
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 102 --------QKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADA 153
Q L F H+ I +H+D K AN+L+ KV D
Sbjct: 119 IEVIADACQALNFSHQNGI------------------IHRDVKPANILISATNAVKVVDF 160
Query: 154 GL-RNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
G+ R + ++ V +L+ E +SDVYS G L E+++G
Sbjct: 161 GIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 24/209 (11%)
Query: 11 FSD----KNLIGEGKFGE----VYKGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASIQHR 62
FSD K IG G + E V+K + + I K P++E E+ L QH
Sbjct: 25 FSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEI--EI-LLRYGQHP 81
Query: 63 NLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXX 122
N++TL + +L+ E + G + ++ RQK F R +
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELL------DKILRQKF-FSEREASFVLHTIGKTV 134
Query: 123 XXXXXPRVVHKDFKTANVL-VDEDF---IAKVADAGLRNFLGRTDVAGPSSQVTADEIFL 178
VVH+D K +N+L VDE ++ D G L + + TA+ F+
Sbjct: 135 EYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTAN--FV 192
Query: 179 ASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
A EV + + + E D++S G+ L +++G
Sbjct: 193 APEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 89 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKXQKLTDDHVQFLIYQILRGL 138
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLAR---HTD--DEMTGYVATRWYRAP 191
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 93/216 (43%), Gaps = 27/216 (12%)
Query: 7 ATKNFSDK----NLIGEGKFGEVY----KGLLQDGMLVAIKKR---PGAPTQEFIDEVCF 55
+T FSD+ ++G+G FGEV K Q+ + I KR + + EV
Sbjct: 26 STAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL 85
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
L + H N++ L + ++ +L+ E G + + +SR++ F +
Sbjct: 86 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI-----ISRKR--FSEVDAARII 138
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
++VH+D K N+L++ +K DA +R +S+ D+
Sbjct: 139 RQVLSGITYMHKNKIVHRDLKPENLLLE----SKSKDANIRIIDFGLSTHFEASKKMKDK 194
Query: 176 I----FLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
I ++A EV + EK DV+S GV L L+SG
Sbjct: 195 IGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 229
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 65/146 (44%), Gaps = 10/146 (6%)
Query: 64 LVTLLGYC-QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXX 122
+T L C Q + + + EY+ G + H+ QV R FK ++
Sbjct: 403 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI---QQVGR----FKEPHAVFYAAEIAIGL 455
Query: 123 XXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEV 182
++++D K NV++D + K+AD G+ V T D ++A E+
Sbjct: 456 FFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPD--YIAPEI 513
Query: 183 KEFRRFSEKSDVYSFGVFLLELVSGR 208
++ + + D ++FGV L E+++G+
Sbjct: 514 IAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 67/175 (38%), Gaps = 34/175 (19%)
Query: 49 FIDEVCFLASIQHRNLVTLLGYCQENN----LQFLIYEYIPNGSVS--IHLYGPSQVSR- 101
F E A++ H +V + + L +++ EY+ ++ +H GP R
Sbjct: 59 FRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 102 --------QKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADA 153
Q L F H+ I +H+D K AN+++ KV D
Sbjct: 119 IEVIADACQALNFSHQNGI------------------IHRDVKPANIMISATNAVKVMDF 160
Query: 154 GL-RNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
G+ R + ++ V +L+ E +SDVYS G L E+++G
Sbjct: 161 GIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 93/216 (43%), Gaps = 27/216 (12%)
Query: 7 ATKNFSDK----NLIGEGKFGEVY----KGLLQDGMLVAIKKR---PGAPTQEFIDEVCF 55
+T FSD+ ++G+G FGEV K Q+ + I KR + + EV
Sbjct: 44 STAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL 103
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
L + H N++ L + ++ +L+ E G + + +SR++ F +
Sbjct: 104 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI-----ISRKR--FSEVDAARII 156
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
++VH+D K N+L++ +K DA +R +S+ D+
Sbjct: 157 RQVLSGITYMHKNKIVHRDLKPENLLLE----SKSKDANIRIIDFGLSTHFEASKKMKDK 212
Query: 176 I----FLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
I ++A EV + EK DV+S GV L L+SG
Sbjct: 213 IGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 247
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 93/216 (43%), Gaps = 27/216 (12%)
Query: 7 ATKNFSDK----NLIGEGKFGEVY----KGLLQDGMLVAIKKR---PGAPTQEFIDEVCF 55
+T FSD+ ++G+G FGEV K Q+ + I KR + + EV
Sbjct: 43 STAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL 102
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
L + H N++ L + ++ +L+ E G + + +SR++ F +
Sbjct: 103 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI-----ISRKR--FSEVDAARII 155
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
++VH+D K N+L++ +K DA +R +S+ D+
Sbjct: 156 RQVLSGITYMHKNKIVHRDLKPENLLLE----SKSKDANIRIIDFGLSTHFEASKKMKDK 211
Query: 176 I----FLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
I ++A EV + EK DV+S GV L L+SG
Sbjct: 212 IGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 246
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
IG G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 93
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 94 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 143
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 144 KYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLAR---HTD--DEMTGYVATRWYRAP 196
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 89 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKXQKLTDDHVQFLIYQILRGL 138
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR---HTD--DEMTGYVATRWYRAP 191
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 19/208 (9%)
Query: 9 KNFSDKNLIGEGKFGEV---YKGLLQDGMLVAIKK--RP---GAPTQEFIDEVCFLASIQ 60
K + + IG G G V Y +L+ VAIKK RP + E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVN 81
Query: 61 HRNLVTLLG-YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
H+N++ LL + + +L+ YI + +L SQV ++E H
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL---SQVI--QMELDHERMSYLLYQML 136
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
++H+D K +N++V D K+ D GL G + + P + A
Sbjct: 137 VGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTP---YVVTRYYRA 193
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSG 207
EV + E D++S G + E++ G
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 65/163 (39%), Gaps = 28/163 (17%)
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLR-------NFLGRTDVAGPSSQVTADEIFLASE 181
+ +H+D N+L+ E + K+ D GL +++ + D P + + IF
Sbjct: 213 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF---- 268
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDE 241
R ++ +SDV+SFGV L E+ S V+ +F LK
Sbjct: 269 ---DRVYTIQSDVWSFGVLLWEIFS-----------LGASPYPGVKIDEEFCRRLKEGTR 314
Query: 242 RLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
+T E Q ++ C +RP+ S++V L L
Sbjct: 315 MRAPDYTT---PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 354
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 65/163 (39%), Gaps = 28/163 (17%)
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLR-------NFLGRTDVAGPSSQVTADEIFLASE 181
+ +H+D N+L+ E + K+ D GL +++ + D P + + IF
Sbjct: 211 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF---- 266
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDE 241
R ++ +SDV+SFGV L E+ S V+ +F LK
Sbjct: 267 ---DRVYTIQSDVWSFGVLLWEIFS-----------LGASPYPGVKIDEEFCRRLKEGTR 312
Query: 242 RLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
+T E Q ++ C +RP+ S++V L L
Sbjct: 313 MRAPDYTT---PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 352
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 69/152 (45%), Gaps = 21/152 (13%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFL----GRTDVAGPSSQVTADEIFLASEVKEF 185
V+H+D K +NVL++ K+ D G+ +L +T AG + + I E+ +
Sbjct: 175 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERI--NPELNQ- 231
Query: 186 RRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLWS 245
+ +S KSD++S G+ ++EL R F L ++++E
Sbjct: 232 KGYSVKSDIWSLGITMIELAILRFPYDSW--------------GTPFQQLKQVVEEPSPQ 277
Query: 246 TFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
++ EF+ +CL +S+ RP+ +++
Sbjct: 278 LPADKFSAEFVDFTSQCLKKNSKERPTYPELM 309
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 65/163 (39%), Gaps = 28/163 (17%)
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLR-------NFLGRTDVAGPSSQVTADEIFLASE 181
+ +H+D N+L+ E + K+ D GL +++ + D P + + IF
Sbjct: 218 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF---- 273
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDE 241
R ++ +SDV+SFGV L E+ S V+ +F LK
Sbjct: 274 ---DRVYTIQSDVWSFGVLLWEIFS-----------LGASPYPGVKIDEEFCRRLKEGTR 319
Query: 242 RLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
+T E Q ++ C +RP+ S++V L L
Sbjct: 320 MRAPDYTT---PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 359
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 65/163 (39%), Gaps = 28/163 (17%)
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLR-------NFLGRTDVAGPSSQVTADEIFLASE 181
+ +H+D N+L+ E + K+ D GL +++ + D P + + IF
Sbjct: 220 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF---- 275
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDE 241
R ++ +SDV+SFGV L E+ S V+ +F LK
Sbjct: 276 ---DRVYTIQSDVWSFGVLLWEIFS-----------LGASPYPGVKIDEEFCRRLKEGTR 321
Query: 242 RLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELDRTL 284
+T E Q ++ C +RP+ S++V L L
Sbjct: 322 MRAPDYTT---PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 361
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 19/208 (9%)
Query: 9 KNFSDKNLIGEGKFGEV---YKGLLQDGMLVAIKK--RP---GAPTQEFIDEVCFLASIQ 60
K + + IG G G V Y +L+ VAIKK RP + E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVN 81
Query: 61 HRNLVTLLG-YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
H+N++ LL + + +L+ YI + +L SQV ++E H
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANL---SQVI--QMELDHERMSYLLYQML 136
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
++H+D K +N++V D K+ D GL G + + P + A
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTP---YVVTRYYRA 193
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSG 207
EV + E D++S G + E++ G
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 69/165 (41%), Gaps = 32/165 (19%)
Query: 56 LASIQHRNLVTLLGYC-QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXX 114
LA + +T L C Q + + + EY+ G + H+ QV + FK ++
Sbjct: 73 LALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHI---QQVGK----FKEPQAVFY 125
Query: 115 XXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-----------RNFLGRTD 163
++++D K NV++D + K+AD G+ R F G D
Sbjct: 126 AAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPD 185
Query: 164 VAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
++A E+ ++ + + D +++GV L E+++G+
Sbjct: 186 -------------YIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 82/208 (39%), Gaps = 19/208 (9%)
Query: 9 KNFSDKNLIGEGKFGEV---YKGLLQDGMLVAIKK--RP---GAPTQEFIDEVCFLASIQ 60
K + + IG G G V Y +L+ VAIKK RP + E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 61 HRNLVTLLG-YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
H+N++ LL + + +L+ YI + L + ++E H
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYI-----VMELMDANLCQVIQMELDHERMSYLLYQML 136
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
++H+D K +N++V D K+ D GL G + + P + A
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP---YVVTRYYRA 193
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSG 207
EV + E D++S G + E++ G
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 89 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDYGLAR---HTD--DEMTGYVATRWYRAP 191
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 89 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDRGLAR---HTD--DEMTGYVATRWYRAP 191
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 92/213 (43%), Gaps = 31/213 (14%)
Query: 16 LIGEGKFGEVYKGL-LQDGMLVAIK---KRPGAPTQEFIDEVCFLASIQ-HRNLVTLLGY 70
L+GEG + +V + LQ+G A+K K+ G EV L Q ++N++ L+ +
Sbjct: 20 LLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEF 79
Query: 71 CQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV 130
+++ +L++E + GS+ H + +QK F R + +
Sbjct: 80 FEDDTRFYLVFEKLQGGSILAH------IQKQK-HFNEREASRVVRDVAAALDFLHTKGI 132
Query: 131 VHKDFKTANVLVDED---FIAKVADAGLRNFLGRTDVAGPSSQVTADEI--------FLA 179
H+D K N+L + K+ D L + + + P +T E+ ++A
Sbjct: 133 AHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTP---ITTPELTTPCGSAEYMA 189
Query: 180 SEVKEF-----RRFSEKSDVYSFGVFLLELVSG 207
EV E + ++ D++S GV L ++SG
Sbjct: 190 PEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 82/208 (39%), Gaps = 19/208 (9%)
Query: 9 KNFSDKNLIGEGKFGEV---YKGLLQDGMLVAIKK--RP---GAPTQEFIDEVCFLASIQ 60
K + + IG G G V Y +L+ VAIKK RP + E+ + +
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 82
Query: 61 HRNLVTLLG-YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
H+N++ LL + + +L+ YI + L + ++E H
Sbjct: 83 HKNIIGLLNVFTPQKSLEEFQDVYI-----VMELMDANLCQVIQMELDHERMSYLLYQML 137
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
++H+D K +N++V D K+ D GL G + + P + A
Sbjct: 138 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP---YVVTRYYRA 194
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSG 207
EV + E D++S G + E++ G
Sbjct: 195 PEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 95/227 (41%), Gaps = 59/227 (25%)
Query: 10 NFSDKNLIGEGKFGEV----YKGLLQDGMLVAIKKRPGAPT--QEFID-EVCFLASIQHR 62
N+ +GEG FG+V + Q L I K+ A + Q I+ E+ +L ++H
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 63 NLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQK-----------LEFKHRLS 111
+++ L + + ++ EY N + ++ ++S Q+ +E+ HR
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR-- 131
Query: 112 IXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFL----------GR 161
++VH+D K N+L+DE K+AD GL N + G
Sbjct: 132 ----------------HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGS 175
Query: 162 TDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
+ A P +V + +++ EV DV+S GV L ++ R
Sbjct: 176 PNYAAP--EVISGKLYAGPEV----------DVWSCGVILYVMLCRR 210
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 82/208 (39%), Gaps = 19/208 (9%)
Query: 9 KNFSDKNLIGEGKFGEV---YKGLLQDGMLVAIKK--RP---GAPTQEFIDEVCFLASIQ 60
K + + IG G G V Y +L+ VAIKK RP + E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 61 HRNLVTLLG-YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
H+N++ LL + + +L+ YI + L + ++E H
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYI-----VMELMDANLCQVIQMELDHERMSYLLYQML 136
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
++H+D K +N++V D K+ D GL G + + P + A
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP---YVVTRYYRA 193
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSG 207
EV + E D++S G + E++ G
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 18/88 (20%)
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLG-----RTDVAGP---SSQVTADEIFLAS 180
++VH+D K N+L+D++ K+AD GL N + +T P + +V +++
Sbjct: 128 KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGP 187
Query: 181 EVKEFRRFSEKSDVYSFGVFLLELVSGR 208
EV DV+S G+ L ++ GR
Sbjct: 188 EV----------DVWSCGIVLYVMLVGR 205
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKL-SKPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 100
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 101 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 150
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 151 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR---HTD--DEMTGYVATRWYRAP 203
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 45/165 (27%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKK------RPGAPTQEFIDEVCFLASIQHRNLVTLLG 69
IG+G FGEV+K + G VA+KK + G P + E+ L ++H N+V L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITA-LREIKILQLLKHENVVNLIE 84
Query: 70 YCQE-----NNLQ---FLIYEYIPN---GSVSIHL--YGPSQVSR------QKLEFKHRL 110
C+ N + +L++++ + G +S L + S++ R L + HR
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR- 143
Query: 111 SIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL 155
+++H+D K ANVL+ D + K+AD GL
Sbjct: 144 -----------------NKILHRDMKAANVLITRDGVLKLADFGL 171
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 93
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 94 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 143
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 144 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR---HTD--DEMTGYVATRWYRAP 196
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 89 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR---HTD--DEMTGYVATRWYRAP 191
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 93
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 94 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 143
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 144 KYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLAR---HTD--DEMTGYVATRWYRAP 196
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 89 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR---HTD--DEMTGYVATRWYRAP 191
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 94
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 95 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 144
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 145 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR---HTD--DEMTGYVATRWYRAP 197
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 111
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 112 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 161
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 162 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR---HTD--DEMTGYVATRWYRAP 214
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 215 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 89 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR---HTD--DEMTGYVATRWYRAP 191
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 73/165 (44%), Gaps = 45/165 (27%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKK------RPGAPTQEFIDEVCFLASIQHRNLVTLLG 69
IG+G FGEV+K + G VA+KK + G P + E+ L ++H N+V L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITA-LREIKILQLLKHENVVNLIE 84
Query: 70 YCQE-----NNLQFLIY------EYIPNGSVSIHL--YGPSQVSR------QKLEFKHRL 110
C+ N + IY E+ G +S L + S++ R L + HR
Sbjct: 85 ICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR- 143
Query: 111 SIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL 155
+++H+D K ANVL+ D + K+AD GL
Sbjct: 144 -----------------NKILHRDMKAANVLITRDGVLKLADFGL 171
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 89 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR---HTD--DEMTGYVATRWYRAP 191
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 84
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 85 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 134
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 135 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR---HTD--DEMTGYVATRWYRAP 187
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 85
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 86 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 135
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 136 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR---HTD--DEMTGYVATRWYRAP 188
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 189 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 89 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKSQKLTDDHVQFLIYQILRGL 138
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGL---CRHTD--DEMTGYVATRWYRAP 191
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 89 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR---HTD--DEMTGYVATRWYRAP 191
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 89 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR---HTD--DEMTGYVATRWYRAP 191
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 95/225 (42%), Gaps = 55/225 (24%)
Query: 10 NFSDKNLIGEGKFGEV----YKGLLQDGMLVAIKKRPGAPT--QEFID-EVCFLASIQHR 62
N+ +GEG FG+V + Q L I K+ A + Q I+ E+ +L ++H
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 63 NLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQK-----------LEFKHRLS 111
+++ L + + ++ EY N + ++ ++S Q+ +E+ HR
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR-- 130
Query: 112 IXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLG-----RTDVAG 166
++VH+D K N+L+DE K+AD GL N + +T
Sbjct: 131 ----------------HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGS 174
Query: 167 P---SSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
P + +V + +++ EV DV+S GV L ++ R
Sbjct: 175 PNYAAPEVISGKLYAGPEV----------DVWSCGVILYVMLCRR 209
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 107
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 108 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 157
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 158 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR---HTD--DEMTGYVATRWYRAP 210
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 211 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 89 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR---HTD--DEMTGXVATRWYRAP 191
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 45/165 (27%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKK------RPGAPTQEFIDEVCFLASIQHRNLVTLLG 69
IG+G FGEV+K + G VA+KK + G P + E+ L ++H N+V L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITA-LREIKILQLLKHENVVNLIE 84
Query: 70 YCQE-----NNLQ---FLIYEYIPN---GSVSIHL--YGPSQVSR------QKLEFKHRL 110
C+ N + +L++++ + G +S L + S++ R L + HR
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR- 143
Query: 111 SIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL 155
+++H+D K ANVL+ D + K+AD GL
Sbjct: 144 -----------------NKILHRDMKAANVLITRDGVLKLADFGL 171
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 67/175 (38%), Gaps = 34/175 (19%)
Query: 49 FIDEVCFLASIQHRNLVTLLGYCQENN----LQFLIYEYIPNGSVS--IHLYGPSQVSR- 101
F E A++ H +V + + L +++ EY+ ++ +H GP R
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 102 --------QKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADA 153
Q L F H+ I +H+D K AN+++ KV D
Sbjct: 119 IEVIADACQALNFSHQNGI------------------IHRDVKPANIMISATNAVKVMDF 160
Query: 154 GL-RNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
G+ R + ++ V +L+ E +SDVYS G L E+++G
Sbjct: 161 GIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 95/225 (42%), Gaps = 55/225 (24%)
Query: 10 NFSDKNLIGEGKFGEV----YKGLLQDGMLVAIKKRPGAPT--QEFID-EVCFLASIQHR 62
N+ +GEG FG+V + Q L I K+ A + Q I+ E+ +L ++H
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 63 NLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQK-----------LEFKHRLS 111
+++ L + + ++ EY N + ++ ++S Q+ +E+ HR
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR-- 121
Query: 112 IXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLG-----RTDVAG 166
++VH+D K N+L+DE K+AD GL N + +T
Sbjct: 122 ----------------HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGS 165
Query: 167 P---SSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
P + +V + +++ EV DV+S GV L ++ R
Sbjct: 166 PNYAAPEVISGKLYAGPEV----------DVWSCGVILYVMLCRR 200
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 108
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 109 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 158
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 159 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR---HTD--DEMTGYVATRWYRAP 211
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 85
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 86 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 135
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 136 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR---HTD--DEMTGYVATRWYRAP 188
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 189 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 95
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 96 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 145
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 146 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR---HTD--DEMTGYVATRWYRAP 198
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 45/165 (27%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKK------RPGAPTQEFIDEVCFLASIQHRNLVTLLG 69
IG+G FGEV+K + G VA+KK + G P + E+ L ++H N+V L+
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITA-LREIKILQLLKHENVVNLIE 83
Query: 70 YCQE-----NNLQ---FLIYEYIPN---GSVSIHL--YGPSQVSR------QKLEFKHRL 110
C+ N + +L++++ + G +S L + S++ R L + HR
Sbjct: 84 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR- 142
Query: 111 SIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL 155
+++H+D K ANVL+ D + K+AD GL
Sbjct: 143 -----------------NKILHRDMKAANVLITRDGVLKLADFGL 170
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 89 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR---HTD--DEMTGYVATRWYRAP 191
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 86
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 87 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 136
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 137 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR---HTD--DEMTGYVATRWYRAP 189
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 190 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 90
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 91 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 140
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 141 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR---HTD--DEMTGYVATRWYRAP 193
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 93
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 94 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 143
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 144 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR---HTD--DEMTGYVATRWYRAP 196
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 87
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 88 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 137
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 138 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR---HTD--DEMTGYVATRWYRAP 190
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 191 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 99
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 100 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 149
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 150 KYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLAR---HTD--DEMTGYVATRWYRAP 202
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 203 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 90
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 91 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 140
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 141 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR---HTD--DEMTGYVATRWYRAP 193
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 67/175 (38%), Gaps = 34/175 (19%)
Query: 49 FIDEVCFLASIQHRNLVTLLGYCQENN----LQFLIYEYIPNGSVS--IHLYGPSQVSR- 101
F E A++ H +V + + L +++ EY+ ++ +H GP R
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 102 --------QKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADA 153
Q L F H+ I +H+D K AN+++ KV D
Sbjct: 119 IEVIADACQALNFSHQNGI------------------IHRDVKPANIMISATNAVKVMDF 160
Query: 154 GL-RNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
G+ R + ++ V +L+ E +SDVYS G L E+++G
Sbjct: 161 GIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 67/175 (38%), Gaps = 34/175 (19%)
Query: 49 FIDEVCFLASIQHRNLVTLLGYCQENN----LQFLIYEYIPNGSVS--IHLYGPSQVSR- 101
F E A++ H +V + + L +++ EY+ ++ +H GP R
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 102 --------QKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADA 153
Q L F H+ I +H+D K AN+++ KV D
Sbjct: 119 IEVIADACQALNFSHQNGI------------------IHRDVKPANIMISATNAVKVMDF 160
Query: 154 GL-RNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
G+ R + ++ V +L+ E +SDVYS G L E+++G
Sbjct: 161 GIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 90
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 91 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 140
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 141 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR---HTD--DEMTGYVATRWYRAP 193
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 99
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 100 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 149
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 150 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR---HTD--DEMTGYVATRWYRAP 202
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 203 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 85/206 (41%), Gaps = 21/206 (10%)
Query: 16 LIGEGKFGEVYKGLLQD-GMLVAIK--------KRPGAPTQEFIDEVCFLASIQHRNLVT 66
+IG+G F V + + ++ G A+K PG T++ E ++H ++V
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 67 LLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXX 126
LL + + ++++E++ + + V R F + ++
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEI-----VKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 127 XP--RVVHKDFKTANVLV---DEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASE 181
++H+D K NVL+ + K+ D G+ LG + + T F+A E
Sbjct: 146 CHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPH--FMAPE 203
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVSG 207
V + + + DV+ GV L L+SG
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 95/225 (42%), Gaps = 55/225 (24%)
Query: 10 NFSDKNLIGEGKFGEV----YKGLLQDGMLVAIKKRPGAPT--QEFID-EVCFLASIQHR 62
N+ +GEG FG+V + Q L I K+ A + Q I+ E+ +L ++H
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 63 NLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQK-----------LEFKHRLS 111
+++ L + + ++ EY N + ++ ++S Q+ +E+ HR
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR-- 125
Query: 112 IXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLG-----RTDVAG 166
++VH+D K N+L+DE K+AD GL N + +T
Sbjct: 126 ----------------HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGS 169
Query: 167 P---SSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
P + +V + +++ EV DV+S GV L ++ R
Sbjct: 170 PNYAAPEVISGKLYAGPEV----------DVWSCGVILYVMLCRR 204
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 100
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 101 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 150
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 151 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR---HTD--DEMTGYVATRWYRAP 203
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 100
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 101 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 150
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 151 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR---HTD--DEMTGYVATRWYRAP 203
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 57/144 (39%), Gaps = 30/144 (20%)
Query: 76 LQFLIYEYIPNGSVS--IHLYGPSQVSR---------QKLEFKHRLSIXXXXXXXXXXXX 124
L +++ EY+ ++ +H GP R Q L F H+ I
Sbjct: 107 LPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGI------------ 154
Query: 125 XXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEVK 183
+H+D K AN+++ KV D G+ R + ++ V +L+ E
Sbjct: 155 ------IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 208
Query: 184 EFRRFSEKSDVYSFGVFLLELVSG 207
+SDVYS G L E+++G
Sbjct: 209 RGDSVDARSDVYSLGCVLYEVLTG 232
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 94
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 95 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 144
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 145 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR---HTD--DEMTGYVATRWYRAP 197
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 85/228 (37%), Gaps = 40/228 (17%)
Query: 1 MEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGM---LVAIKKRPGAPTQEFIDEVCFLA 57
++E + + LIG+G+FG+VY G + L+ I++ + F EV
Sbjct: 25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYR 84
Query: 58 SIQHRNLVTLLGYCQENNLQFLI---------YEYIPNGSVSIHLYGPSQVSRQKLEFKH 108
+H N+V +G C +I Y + + + + + Q++++ ++
Sbjct: 85 QTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMG 144
Query: 109 RLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPS 168
L ++HKD K+ NV D + + D GL + G
Sbjct: 145 YLHAKG---------------ILHKDLKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRRE 188
Query: 169 SQVTADEIFLASEVKEFRR------------FSEKSDVYSFGVFLLEL 204
++ +L E R FS+ SDV++ G EL
Sbjct: 189 DKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 88/213 (41%), Gaps = 28/213 (13%)
Query: 9 KNFSDKNLIGEGKFGEVYKGL-LQDGMLVAIKK--RPGAP---TQEFIDEVCFLASIQHR 62
K + +G G +G V + + G VAIKK RP + E+ L +QH
Sbjct: 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE 101
Query: 63 NLVTLLG-YCQENNLQ--FLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
N++ LL + ++L+ + Y +P + + S +K+++
Sbjct: 102 NVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQY-------LVYQML 154
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT----ADE 175
VVH+D K N+ V+ED K+ D GL D VT A E
Sbjct: 155 KGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYVVTRWYRAPE 211
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
+ L+ + +++ D++S G + E+++G+
Sbjct: 212 VILS-----WMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 82/208 (39%), Gaps = 19/208 (9%)
Query: 9 KNFSDKNLIGEGKFGEV---YKGLLQDGMLVAIKK--RP---GAPTQEFIDEVCFLASIQ 60
K + + IG G G V Y +L+ VAIKK RP + E+ + +
Sbjct: 26 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 83
Query: 61 HRNLVTLLG-YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
H+N++ LL + + +L+ YI + L + ++E H
Sbjct: 84 HKNIIGLLNVFTPQKSLEEFQDVYI-----VMELMDANLCQVIQMELDHERMSYLLYQML 138
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
++H+D K +N++V D K+ D GL G + + P + A
Sbjct: 139 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVP---FVVTRYYRA 195
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSG 207
EV + E D++S G + E++ G
Sbjct: 196 PEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 90
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 91 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 140
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 141 KYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLAR---HTD--DEMTGYVATRWYRAP 193
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 94
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 95 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 144
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 145 KYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLAR---HTD--DEMTGYVATRWYRAP 197
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 93/216 (43%), Gaps = 27/216 (12%)
Query: 7 ATKNFSDK----NLIGEGKFGEVY----KGLLQDGMLVAIKKR---PGAPTQEFIDEVCF 55
+T FSD+ ++G+G FGEV K Q+ + I KR + + EV
Sbjct: 20 STAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL 79
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
L + H N+ L + ++ +L+ E G + + +SR++ F +
Sbjct: 80 LKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEI-----ISRKR--FSEVDAARII 132
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
++VH+D K N+L++ +K DA +R +S+ D+
Sbjct: 133 RQVLSGITYXHKNKIVHRDLKPENLLLE----SKSKDANIRIIDFGLSTHFEASKKXKDK 188
Query: 176 I----FLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
I ++A EV + EK DV+S GV L L+SG
Sbjct: 189 IGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G VA+KK P Q I E+ L ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 89 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL ++AG A + A
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMAG----FVATRWYRAP 191
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 31/96 (32%)
Query: 129 RVVHKDFKTANVLVDE----------------DFIAKVADAGLRNFLGRTDVAGPSSQVT 172
+++H+D K +N+L+D D IAK DAG R ++ + +S+
Sbjct: 146 KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASR-- 203
Query: 173 ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
+ + +SDV+S G+ L EL +GR
Sbjct: 204 -------------QGYDVRSDVWSLGITLYELATGR 226
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 85/211 (40%), Gaps = 17/211 (8%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGLLQD-GMLVAIKKRPGAPTQEFIDEVCFLA------- 57
L NF ++G+G FG+V +++ G L A+K + D C +
Sbjct: 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSL 79
Query: 58 SIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXX 117
+ H L L Q + F + E++ G + H+ Q SR+ E + R
Sbjct: 80 ARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI----QKSRRFDEARARFYAAEIIS 135
Query: 118 XXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIF 177
++++D K NVL+D + K+AD G+ V + T D +
Sbjct: 136 ALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPD--Y 190
Query: 178 LASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
+A E+ + + D ++ GV L E++ G
Sbjct: 191 IAPEILQEMLYGPAVDWWAMGVLLYEMLCGH 221
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G VA+KK P Q I E+ L ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 89 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL ++AG A + A
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMAG----FVATRWYRAP 191
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 81/208 (38%), Gaps = 22/208 (10%)
Query: 9 KNFSDKNLIGEGKFGEVY--KGLLQDGM--LVAIKKRPGAPTQEFIDEVCFLASIQHRNL 64
K F ++G G F EV+ K L + L IKK P +E+ L I+H N+
Sbjct: 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENI 68
Query: 65 VTLLGYCQENNLQFLIYEYIPNGSV--SIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXX 122
VTL + +L+ + + G + I G L + LS
Sbjct: 69 VTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENG-- 126
Query: 123 XXXXXPRVVHKDFKTANVLV---DEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
+VH+D K N+L +E+ + D G L + + G S ++A
Sbjct: 127 -------IVHRDLKPENLLYLTPEENSKIMITDFG----LSKMEQNGIMSTACGTPGYVA 175
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSG 207
EV + +S+ D +S GV L+ G
Sbjct: 176 PEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 8/153 (5%)
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
L + +H L L Q ++ + EY G + HL SR+++ + R
Sbjct: 205 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL------SRERVFSEDRARFYGA 258
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
VV++D K N+++D+D K+ D GL G D A + E
Sbjct: 259 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTFCGTPE 317
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
+LA EV E + D + GV + E++ GR
Sbjct: 318 -YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
++++D K N+L+DE+ K+ D GL D + ++A EV R +
Sbjct: 147 IIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRRGHT 204
Query: 190 EKSDVYSFGVFLLELVSG 207
+ +D +SFGV + E+++G
Sbjct: 205 QSADWWSFGVLMFEMLTG 222
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G VA+KK P Q I E+ L ++H N++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 84
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 85 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 134
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL ++AG A + A
Sbjct: 135 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMAG----FVATRWYRAP 187
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQV-TADEIFLASEVKEFRR 187
RV+H+D K N+ ++ED K+ D GL + + G +V ++A EV +
Sbjct: 161 RVIHRDLKLGNLFLNEDLEVKIGDFGLAT---KVEYDGERKKVLCGTPNYIAPEVLSKKG 217
Query: 188 FSEKSDVYSFGVFLLELVSGR 208
S + DV+S G + L+ G+
Sbjct: 218 HSFEVDVWSIGCIMYTLLVGK 238
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQV-TADEIFLASEVKEFRR 187
RV+H+D K N+ ++ED K+ D GL + + G +V ++A EV +
Sbjct: 135 RVIHRDLKLGNLFLNEDLEVKIGDFGLAT---KVEYDGERKKVLCGTPNYIAPEVLSKKG 191
Query: 188 FSEKSDVYSFGVFLLELVSGR 208
S + DV+S G + L+ G+
Sbjct: 192 HSFEVDVWSIGCIMYTLLVGK 212
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
++++D K N+L+DE+ K+ D GL D + ++A EV R +
Sbjct: 148 IIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRRGHT 205
Query: 190 EKSDVYSFGVFLLELVSG 207
+ +D +SFGV + E+++G
Sbjct: 206 QSADWWSFGVLMFEMLTG 223
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQV-TADEIFLASEVKEFRR 187
RV+H+D K N+ ++ED K+ D GL + + G +V ++A EV +
Sbjct: 159 RVIHRDLKLGNLFLNEDLEVKIGDFGLAT---KVEYDGERKKVLCGTPNYIAPEVLSKKG 215
Query: 188 FSEKSDVYSFGVFLLELVSGR 208
S + DV+S G + L+ G+
Sbjct: 216 HSFEVDVWSIGCIMYTLLVGK 236
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 85/209 (40%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 111
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 112 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 161
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD A + A
Sbjct: 162 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR---HTD--DEMXGYVATRWYRAP 214
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 215 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 83/207 (40%), Gaps = 37/207 (17%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQEFIDE--VCFLASIQHR------------ 62
+G G FG V MLV K+ + +D+ V L I+H
Sbjct: 50 LGTGSFGRV--------MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF 101
Query: 63 -NLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXX 121
LV L ++N+ +++ EY P G + HL + S F +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 122 XXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLAS 180
++++D K N+L+D+ KVAD G + GRT + + A EI L+
Sbjct: 162 D-------LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILS- 213
Query: 181 EVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ +++ D ++ GV + E+ +G
Sbjct: 214 -----KGYNKAVDWWALGVLIYEMAAG 235
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 8/153 (5%)
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
L + +H L L Q ++ + EY G + HL SR+++ + R
Sbjct: 202 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL------SRERVFSEDRARFYGA 255
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
VV++D K N+++D+D K+ D GL G D A + E
Sbjct: 256 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTFCGTPE 314
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
+LA EV E + D + GV + E++ GR
Sbjct: 315 -YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
++++D K N+L+DE+ K+ D GL D + ++A EV R +
Sbjct: 147 IIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRRGHT 204
Query: 190 EKSDVYSFGVFLLELVSG 207
+ +D +SFGV + E+++G
Sbjct: 205 QSADWWSFGVLMFEMLTG 222
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 69/159 (43%), Gaps = 14/159 (8%)
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
++E L ++ LV L ++N+ +++ EY P G + HL + S F
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPS 168
+ ++++D K N+++D+ KV D GL + GRT +
Sbjct: 149 QIVLTFEYLHSLD-------LIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGT 201
Query: 169 SQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A EI L+ + +++ D ++ GV + E+ +G
Sbjct: 202 PEYLAPEIILS------KGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 40/78 (51%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
++H+D K N+L++ED ++ D G L ++ +++ E+ + S
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAS 212
Query: 190 EKSDVYSFGVFLLELVSG 207
+ SD+++ G + +LV+G
Sbjct: 213 KSSDLWALGCIIYQLVAG 230
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 85/204 (41%), Gaps = 18/204 (8%)
Query: 5 SLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASIQHRNL 64
+L T +F L+ + G Y + D V K+ + ++E L ++ L
Sbjct: 69 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQ----IEHTLNEKRILQAVNFPFL 124
Query: 65 VTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXX 124
V L ++N+ +++ EY+P G + HL + S F +
Sbjct: 125 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD-- 182
Query: 125 XXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEVK 183
++++D K N+L+D+ +V D G + GRT + + A EI L+
Sbjct: 183 -----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS---- 233
Query: 184 EFRRFSEKSDVYSFGVFLLELVSG 207
+ +++ D ++ GV + E+ +G
Sbjct: 234 --KGYNKAVDWWALGVLIYEMAAG 255
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 69/159 (43%), Gaps = 14/159 (8%)
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
++E L ++ LV L ++N+ +++ EY+P G + HL + S F
Sbjct: 75 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 134
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPS 168
+ ++++D K N+L+D+ +V D G + GRT +
Sbjct: 135 QIVLTFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGT 187
Query: 169 SQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A EI L+ + +++ D ++ GV + E+ +G
Sbjct: 188 PEYLAPEIILS------KGYNKAVDWWALGVLIYEMAAG 220
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 85/204 (41%), Gaps = 18/204 (8%)
Query: 5 SLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASIQHRNL 64
+L T +F L+ + G Y + D V K+ + ++E L ++ L
Sbjct: 41 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQ----IEHTLNEKRILQAVNFPFL 96
Query: 65 VTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXX 124
V L ++N+ +++ EY+P G + HL + S F +
Sbjct: 97 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD-- 154
Query: 125 XXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEVK 183
++++D K N+L+D+ +V D G + GRT + + A EI L+
Sbjct: 155 -----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS---- 205
Query: 184 EFRRFSEKSDVYSFGVFLLELVSG 207
+ +++ D ++ GV + E+ +G
Sbjct: 206 --KGYNKAVDWWALGVLIYEMAAG 227
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 69/159 (43%), Gaps = 14/159 (8%)
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
++E L ++ LV L ++N+ +++ EY+P G + HL + S F
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPS 168
+ ++++D K N+L+D+ +V D G + GRT +
Sbjct: 150 QIVLTFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGT 202
Query: 169 SQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A EI L+ + +++ D ++ GV + E+ +G
Sbjct: 203 PEYLAPEIILS------KGYNKAVDWWALGVLIYEMAAG 235
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 64/153 (41%), Gaps = 21/153 (13%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFL----GRTDVAGPSSQVTADEIFLASEVKEF 185
V+H+D K +N+L+DE K+ D G+ L + AG ++ + + I K
Sbjct: 146 VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKP- 204
Query: 186 RRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLWS 245
+ ++DV+S G+ L+EL +G+ DF L K+L E
Sbjct: 205 -DYDIRADVWSLGISLVELATGQ--------------FPYKNCKTDFEVLTKVLQEEPPL 249
Query: 246 TFTNEGME-EFIQLIVRCLDPSSERRPSMSDVV 277
+ G +F + CL +RP + ++
Sbjct: 250 LPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLL 282
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 88/213 (41%), Gaps = 28/213 (13%)
Query: 9 KNFSDKNLIGEGKFGEVYKGL-LQDGMLVAIKK--RPGAP---TQEFIDEVCFLASIQHR 62
K + +G G +G V + + G VAIKK RP + E+ L +QH
Sbjct: 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE 83
Query: 63 NLVTLLG-YCQENNLQ--FLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
N++ LL + ++L+ + Y +P + + S +K+++
Sbjct: 84 NVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQY-------LVYQML 136
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT----ADE 175
VVH+D K N+ V+ED K+ D GL D VT A E
Sbjct: 137 KGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYVVTRWYRAPE 193
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
+ L+ + +++ D++S G + E+++G+
Sbjct: 194 VILS-----WMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 69/159 (43%), Gaps = 14/159 (8%)
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
++E L ++ LV L ++N+ +++ EY+P G + HL + S F
Sbjct: 89 LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPS 168
+ ++++D K N+L+D+ +V D G + GRT +
Sbjct: 149 QIVLTFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 169 SQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A EI L+ + +++ D ++ GV + E+ +G
Sbjct: 202 PEYLAPEIILS------KGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 69/159 (43%), Gaps = 14/159 (8%)
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
++E L ++ LV L ++N+ +++ EY+P G + HL + S F
Sbjct: 89 LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPS 168
+ ++++D K N+L+D+ +V D G + GRT +
Sbjct: 149 QIVLTFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 169 SQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A EI L+ + +++ D ++ GV + E+ +G
Sbjct: 202 PEYLAPEIILS------KGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 85/204 (41%), Gaps = 18/204 (8%)
Query: 5 SLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASIQHRNL 64
+L T +F L+ + G Y + D V K+ + ++E L ++ L
Sbjct: 49 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQ----IEHTLNEKRILQAVNFPFL 104
Query: 65 VTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXX 124
V L ++N+ +++ EY+P G + HL + S F +
Sbjct: 105 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD-- 162
Query: 125 XXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEVK 183
++++D K N+L+D+ +V D G + GRT + + A EI L+
Sbjct: 163 -----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS---- 213
Query: 184 EFRRFSEKSDVYSFGVFLLELVSG 207
+ +++ D ++ GV + E+ +G
Sbjct: 214 --KGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 85/204 (41%), Gaps = 18/204 (8%)
Query: 5 SLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASIQHRNL 64
+L T +F L+ + G Y + D V K+ + ++E L ++ L
Sbjct: 49 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQ----IEHTLNEKRILQAVNFPFL 104
Query: 65 VTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXX 124
V L ++N+ +++ EY+P G + HL + S F +
Sbjct: 105 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD-- 162
Query: 125 XXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEVK 183
++++D K N+L+D+ +V D G + GRT + + A EI L+
Sbjct: 163 -----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS---- 213
Query: 184 EFRRFSEKSDVYSFGVFLLELVSG 207
+ +++ D ++ GV + E+ +G
Sbjct: 214 --KGYNKAVDWWALGVLIYEMAAG 235
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 85/204 (41%), Gaps = 18/204 (8%)
Query: 5 SLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASIQHRNL 64
+L T +F L+ + G Y + D V K+ + ++E L ++ L
Sbjct: 49 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQ----IEHTLNEKRILQAVNFPFL 104
Query: 65 VTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXX 124
V L ++N+ +++ EY+P G + HL + S F +
Sbjct: 105 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD-- 162
Query: 125 XXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEVK 183
++++D K N+L+D+ +V D G + GRT + + A EI L+
Sbjct: 163 -----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS---- 213
Query: 184 EFRRFSEKSDVYSFGVFLLELVSG 207
+ +++ D ++ GV + E+ +G
Sbjct: 214 --KGYNKAVDWWALGVLIYEMAAG 235
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 69/159 (43%), Gaps = 14/159 (8%)
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
++E L ++ LV L ++N+ +++ EY+P G + HL + S F
Sbjct: 89 LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPS 168
+ ++++D K N+L+D+ +V D G + GRT +
Sbjct: 149 QIVLTFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 169 SQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A EI L+ + +++ D ++ GV + E+ +G
Sbjct: 202 PEYLAPEIILS------KGYNKAVDWWALGVLIYEMAAG 234
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 85/209 (40%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G VA+KK P Q I E+ L ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 89 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR---HTD--DEMTGYVATRWYRAP 191
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 85/202 (42%), Gaps = 24/202 (11%)
Query: 17 IGEGKFGEVYKGLLQDGM-----LVAIKKRPGAPTQ---EFIDEVCFLASIQHRNLVTLL 68
+G G +GEV L +D + + I ++ T + ++EV L + H N++ L
Sbjct: 45 LGSGAYGEVL--LCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLY 102
Query: 69 GYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
+ ++ +L+ E G + + +++F +
Sbjct: 103 DFFEDKRNYYLVMECYKGGELFDEII-------HRMKFNEVDAAVIIKQVLSGVTYLHKH 155
Query: 129 RVVHKDFKTANVLV---DEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEF 185
+VH+D K N+L+ ++D + K+ D GL + + ++A EV
Sbjct: 156 NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF---ENQKKMKERLGTAYYIAPEVLR- 211
Query: 186 RRFSEKSDVYSFGVFLLELVSG 207
+++ EK DV+S GV L L++G
Sbjct: 212 KKYDEKCDVWSIGVILFILLAG 233
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 95/226 (42%), Gaps = 48/226 (21%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKK-----RPGAPTQEFIDEVCFLASIQ-HRNLVTLLG 69
+G+G +G V+K + + G +VA+KK + Q E+ L + H N+V LL
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 70 YCQENNLQ--FLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXX 127
+ +N + +L+++Y+ +H + + LE H+ +
Sbjct: 77 VLRADNDRDVYLVFDYM---ETDLH----AVIRANILEPVHKQYVVYQLIKVIKYLHSGG 129
Query: 128 PRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAG-------------------- 166
++H+D K +N+L++ + KVAD GL R+F+ V
Sbjct: 130 --LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPIL 187
Query: 167 ----PSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
+ A EI L S ++++ D++S G L E++ G+
Sbjct: 188 TDYVATRWYRAPEILLGST-----KYTKGIDMWSLGCILGEILCGK 228
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 82/209 (39%), Gaps = 19/209 (9%)
Query: 9 KNFSDKNLIGEGKFGEV---YKGLLQDGMLVAIKK--RP---GAPTQEFIDEVCFLASIQ 60
K + + IG G G V Y +L+ VAIKK RP + E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 61 HRNLVTLLG-YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
H+N++ LL + + +L+ YI + L + ++E H
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYI-----VMELMDANLCQVIQMELDHERMSYLLYQML 136
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
++H+D K +N++V D K+ D GL G + + P + A
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPE---VVTRYYRA 193
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
EV + E D++S G + E+V +
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 85/209 (40%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G VA+KK P Q I E+ L ++H N++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 84
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 85 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 134
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 135 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR---HTD--DEMTGYVATRWYRAP 187
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 8/153 (5%)
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
L + +H L L Q ++ + EY G + HL SR+++ + R
Sbjct: 64 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL------SRERVFSEDRARFYGA 117
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
VV++D K N+++D+D K+ D GL G D A E
Sbjct: 118 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPE 176
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
+LA EV E + D + GV + E++ GR
Sbjct: 177 -YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 69/159 (43%), Gaps = 14/159 (8%)
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
++E L ++ LV L ++N+ +++ EY+P G + HL + S F
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPS 168
+ ++++D K N+L+D+ +V D G + GRT +
Sbjct: 150 QIVLTFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 202
Query: 169 SQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A EI L+ + +++ D ++ GV + E+ +G
Sbjct: 203 PEYLAPEIILS------KGYNKAVDWWALGVLIYEMAAG 235
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 69/159 (43%), Gaps = 14/159 (8%)
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
++E L ++ LV L ++N+ +++ EY+P G + HL + S F
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPS 168
+ ++++D K N+L+D+ +V D G + GRT +
Sbjct: 149 QIVLTFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 169 SQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A EI L+ + +++ D ++ GV + E+ +G
Sbjct: 202 PEYLAPEIILS------KGYNKAVDWWALGVLIYEMAAG 234
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 8/153 (5%)
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
L + +H L L Q ++ + EY G + HL SR+++ + R
Sbjct: 63 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL------SRERVFSEDRARFYGA 116
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
VV++D K N+++D+D K+ D GL G D A E
Sbjct: 117 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPE 175
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
+LA EV E + D + GV + E++ GR
Sbjct: 176 -YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 85/209 (40%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G VA+KK P Q I E+ L ++H N++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 94
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 95 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 144
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 145 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR---HTD--DEMTGYVATRWYRAP 197
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 85/209 (40%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G VA+KK P Q I E+ L ++H N++ LL
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 98
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 99 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 148
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 149 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR---HTD--DEMTGYVATRWYRAP 201
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 202 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 69/159 (43%), Gaps = 14/159 (8%)
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
++E L ++ LV L ++N+ +++ EY+P G + HL + S F
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPS 168
+ ++++D K N+L+D+ +V D G + GRT +
Sbjct: 149 QIVLTFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 169 SQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A EI L+ + +++ D ++ GV + E+ +G
Sbjct: 202 PEYLAPEIILS------KGYNKAVDWWALGVLIYEMAAG 234
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 84/209 (40%), Gaps = 22/209 (10%)
Query: 10 NFSDKNLIGEGKFGEV----------YKGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
+F L+G+G FG+V Y + V I K A T + E L +
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT---VTESRVLQNT 62
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
+H L L Q ++ + EY G + HL SR+++ F +
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL------SRERV-FTEERARFYGAEIV 115
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
VV++D K N+++D+D K+ D GL G +D A + E +LA
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPE-YLA 173
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
EV E + D + GV + E++ GR
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 85/209 (40%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G VA+KK P Q I E+ L ++H N++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 108
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 109 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 158
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 159 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR---HTD--DEMTGYVATRWYRAP 211
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 8/153 (5%)
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
L + +H L L Q ++ + EY G + HL SR+++ + R
Sbjct: 62 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL------SRERVFSEDRARFYGA 115
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
VV++D K N+++D+D K+ D GL G D A E
Sbjct: 116 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPE 174
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
+LA EV E + D + GV + E++ GR
Sbjct: 175 -YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 69/159 (43%), Gaps = 14/159 (8%)
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
++E L ++ LV L ++N+ +++ EY+P G + HL + S F
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPS 168
+ ++++D K N+L+D+ +V D G + GRT +
Sbjct: 149 QIVLTFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 169 SQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A EI L+ + +++ D ++ GV + E+ +G
Sbjct: 202 PEYLAPEIILS------KGYNKAVDWWALGVLIYEMAAG 234
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V ++ G+ +A+KK P Q I E+ L ++H N++ LL
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 117
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 118 VFTPATSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 167
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 168 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR---HTD--DEMTGYVATRWYRAP 220
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + ++ D++S G + EL++GR
Sbjct: 221 EIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 85/209 (40%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G VA+KK P Q I E+ L ++H N++ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 107
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 108 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 157
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 158 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR---HTD--DEMTGYVATRWYRAP 210
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 211 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 84/209 (40%), Gaps = 22/209 (10%)
Query: 10 NFSDKNLIGEGKFGEV----------YKGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
+F L+G+G FG+V Y + V I K A T + E L +
Sbjct: 9 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT---VTESRVLQNT 65
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
+H L L Q ++ + EY G + HL SR+++ + R
Sbjct: 66 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL------SRERVFTEERARFYGAEIVS 119
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
VV++D K N+++D+D K+ D GL G +D A + E +LA
Sbjct: 120 ALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPE-YLA 176
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
EV E + D + GV + E++ GR
Sbjct: 177 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 84/209 (40%), Gaps = 22/209 (10%)
Query: 10 NFSDKNLIGEGKFGEV----------YKGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
+F L+G+G FG+V Y + V I K A T + E L +
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT---VTESRVLQNT 62
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
+H L L Q ++ + EY G + HL SR+++ + R
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL------SRERVFTEERARFYGAEIVS 116
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
VV++D K N+++D+D K+ D GL G +D A + E +LA
Sbjct: 117 ALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPE-YLA 173
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
EV E + D + GV + E++ GR
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 81/208 (38%), Gaps = 36/208 (17%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIK----KRPGAPTQEFIDEVCFLASIQHRNLVTLLGYC 71
IG G F +V + G +VAIK G+ E+ L +++H+++ L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 72 QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVV 131
+ N F++ EY P G + ++ ++S ++ R +
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQG-------YA 130
Query: 132 HKDFKTANVLVDEDFIAKVADAG------------LRNFLGRTDVAGPSSQVTADEIFLA 179
H+D K N+L DE K+ D G L+ G A P ++ + +L
Sbjct: 131 HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAP--ELIQGKSYLG 188
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSG 207
SE +DV+S G+ L L+ G
Sbjct: 189 SE----------ADVWSMGILLYVLMCG 206
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 115/297 (38%), Gaps = 53/297 (17%)
Query: 10 NFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKKRPGAPTQEF-----IDEVCFLASIQHRN 63
+F +G G FG V++ + D AIK R P +E + EV LA ++H
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIK-RIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQK-----------LEFKHR-LS 111
+V E N E + S ++LY Q+ R++ +E + R +
Sbjct: 65 IVRYFNAWLEKNTT----EKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVC 120
Query: 112 IXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTD-------- 163
+ ++H+D K +N+ D + KV D GL + + +
Sbjct: 121 LHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP 180
Query: 164 ---VAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXX 220
A + QV +++++ E +S K D++S G+ L EL+
Sbjct: 181 MPAYARHTGQV-GTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL-----------YPFS 228
Query: 221 XXVELVQNSRDFSNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
+E V+ D NL + FT + E++ ++ L PS RP +++
Sbjct: 229 TQMERVRTLTDVRNL------KFPPLFTQKYPCEYV-MVQDMLSPSPMERPEAINII 278
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 88/213 (41%), Gaps = 27/213 (12%)
Query: 10 NFSDKNLIGEGKFGEVYKGLLQD-GMLVAIKKRPGAPTQEFID-EVCFLASIQHRNLVTL 67
+++D +IG G FG VY+ L D G LVAIKK + F + E+ + + H N+V L
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--LQDKRFKNRELQIMRKLDHCNIVRL 90
Query: 68 L------GYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXX 121
G ++ L+ +Y+P +V+R K L +
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPETVY--------RVARHYSRAKQTLPVIYVKLYMYQ 142
Query: 122 XXXXXXP----RVVHKDFKTANVLVDED-FIAKVADAGLRNFLGRTDVAGPSSQVTADEI 176
+ H+D K N+L+D D + K+ D G L R + P+
Sbjct: 143 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE---PNVSXICSRY 199
Query: 177 FLASE-VKEFRRFSEKSDVYSFGVFLLELVSGR 208
+ A E + ++ DV+S G L EL+ G+
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 90/211 (42%), Gaps = 17/211 (8%)
Query: 4 LSLATKNFSDKNLIGEGKFGEVYK------GLLQDGMLVAIKKRPGAPTQEFIDEVCFLA 57
+ L +F + +G G G V+K GL+ L+ ++ +P A + I E+ L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIRNQIIRELQVLH 59
Query: 58 SIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXX 117
+V G + + E++ GS+ L ++ Q L ++SI
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQIL---GKVSIAVIKG 116
Query: 118 XXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIF 177
+++H+D K +N+LV+ K+ D G+ L + ++ +
Sbjct: 117 LTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSY 169
Query: 178 LASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
++ E + +S +SD++S G+ L+E+ GR
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 85/205 (41%), Gaps = 28/205 (13%)
Query: 16 LIGEGKFGEVYKG---LLQDGMLVAIKKRPGAP---TQEFIDEVCFLASIQHRNLVTLLG 69
++G+G FGEV K + Q V + + A T + EV L + H N++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 70 YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPR 129
++++ +++ E G + + + R++ F +
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEI-----IKRKR--FSEHDAARIIKQVFSGITYMHKHN 141
Query: 130 VVHKDFKTANVLVD---EDFIAKVADAGLRNFLGRT----DVAGPSSQVTADEIFLASEV 182
+VH+D K N+L++ +D K+ D GL + D G + + A E+ +
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYI-APEVLRGT-- 198
Query: 183 KEFRRFSEKSDVYSFGVFLLELVSG 207
+ EK DV+S GV L L+SG
Sbjct: 199 -----YDEKCDVWSAGVILYILLSG 218
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 88/213 (41%), Gaps = 27/213 (12%)
Query: 10 NFSDKNLIGEGKFGEVYKGLLQD-GMLVAIKKRPGAPTQEFID-EVCFLASIQHRNLVTL 67
+++D +IG G FG VY+ L D G LVAIKK + F + E+ + + H N+V L
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--LQDKRFKNRELQIMRKLDHCNIVRL 83
Query: 68 L------GYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXX 121
G ++ L+ +Y+P +V+R K L +
Sbjct: 84 RYFFYSSGEKKDEVYLNLVLDYVPETVY--------RVARHYSRAKQTLPVIYVKLYMYQ 135
Query: 122 XXXXXXP----RVVHKDFKTANVLVDED-FIAKVADAGLRNFLGRTDVAGPSSQVTADEI 176
+ H+D K N+L+D D + K+ D G L R + P+
Sbjct: 136 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE---PNVSYICSRY 192
Query: 177 FLASE-VKEFRRFSEKSDVYSFGVFLLELVSGR 208
+ A E + ++ DV+S G L EL+ G+
Sbjct: 193 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 88/213 (41%), Gaps = 27/213 (12%)
Query: 10 NFSDKNLIGEGKFGEVYKGLLQD-GMLVAIKKRPGAPTQEFID-EVCFLASIQHRNLVTL 67
+++D +IG G FG VY+ L D G LVAIKK + F + E+ + + H N+V L
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKNRELQIMRKLDHCNIVRL 91
Query: 68 L------GYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXX 121
G ++ L+ +Y+P +V+R K L +
Sbjct: 92 RYFFYSSGEKKDEVYLNLVLDYVPETVY--------RVARHYSRAKQTLPVIYVKLYMYQ 143
Query: 122 XXXXXXP----RVVHKDFKTANVLVDED-FIAKVADAGLRNFLGRTDVAGPSSQVTADEI 176
+ H+D K N+L+D D + K+ D G L R + P+
Sbjct: 144 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE---PNVSYICSRY 200
Query: 177 FLASE-VKEFRRFSEKSDVYSFGVFLLELVSGR 208
+ A E + ++ DV+S G L EL+ G+
Sbjct: 201 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 90/211 (42%), Gaps = 17/211 (8%)
Query: 4 LSLATKNFSDKNLIGEGKFGEVYK------GLLQDGMLVAIKKRPGAPTQEFIDEVCFLA 57
+ L +F + +G G G V+K GL+ L+ ++ +P A + I E+ L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIRNQIIRELQVLH 59
Query: 58 SIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXX 117
+V G + + E++ GS+ L ++ Q L ++SI
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQIL---GKVSIAVIKG 116
Query: 118 XXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIF 177
+++H+D K +N+LV+ K+ D G+ L + ++ +
Sbjct: 117 LTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSY 169
Query: 178 LASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
++ E + +S +SD++S G+ L+E+ GR
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 88/213 (41%), Gaps = 27/213 (12%)
Query: 10 NFSDKNLIGEGKFGEVYKGLLQD-GMLVAIKKRPGAPTQEFID-EVCFLASIQHRNLVTL 67
+++D +IG G FG VY+ L D G LVAIKK + F + E+ + + H N+V L
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--LQDKRFKNRELQIMRKLDHCNIVRL 82
Query: 68 L------GYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXX 121
G ++ L+ +Y+P +V+R K L +
Sbjct: 83 RYFFYSSGEKKDEVYLNLVLDYVPETVY--------RVARHYSRAKQTLPVIYVKLYMYQ 134
Query: 122 XXXXXXP----RVVHKDFKTANVLVDED-FIAKVADAGLRNFLGRTDVAGPSSQVTADEI 176
+ H+D K N+L+D D + K+ D G L R + P+
Sbjct: 135 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE---PNVSXICSRY 191
Query: 177 FLASE-VKEFRRFSEKSDVYSFGVFLLELVSGR 208
+ A E + ++ DV+S G L EL+ G+
Sbjct: 192 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 90/211 (42%), Gaps = 17/211 (8%)
Query: 4 LSLATKNFSDKNLIGEGKFGEVYK------GLLQDGMLVAIKKRPGAPTQEFIDEVCFLA 57
+ L +F + +G G G V+K GL+ L+ ++ +P A + I E+ L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIRNQIIRELQVLH 59
Query: 58 SIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXX 117
+V G + + E++ GS+ L ++ Q L ++SI
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQIL---GKVSIAVIKG 116
Query: 118 XXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIF 177
+++H+D K +N+LV+ K+ D G+ L + ++ +
Sbjct: 117 LTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSY 169
Query: 178 LASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
++ E + +S +SD++S G+ L+E+ GR
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRF 188
+++H+D K +N+LV+ K+ D G+ L + ++ ++A E + +
Sbjct: 135 QIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSYMAPERLQGTHY 190
Query: 189 SEKSDVYSFGVFLLELVSGR 208
S +SD++S G+ L+EL GR
Sbjct: 191 SVQSDIWSMGLSLVELAVGR 210
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 88/213 (41%), Gaps = 27/213 (12%)
Query: 10 NFSDKNLIGEGKFGEVYKGLLQD-GMLVAIKKRPGAPTQEFID-EVCFLASIQHRNLVTL 67
+++D +IG G FG VY+ L D G LVAIKK + F + E+ + + H N+V L
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKNRELQIMRKLDHCNIVRL 97
Query: 68 L------GYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXX 121
G ++ L+ +Y+P +V+R K L +
Sbjct: 98 RYFFYSSGEKKDEVYLNLVLDYVPETVY--------RVARHYSRAKQTLPVIYVKLYMYQ 149
Query: 122 XXXXXXP----RVVHKDFKTANVLVDED-FIAKVADAGLRNFLGRTDVAGPSSQVTADEI 176
+ H+D K N+L+D D + K+ D G L R + P+
Sbjct: 150 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE---PNVSXICSRY 206
Query: 177 FLASE-VKEFRRFSEKSDVYSFGVFLLELVSGR 208
+ A E + ++ DV+S G L EL+ G+
Sbjct: 207 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 88/213 (41%), Gaps = 27/213 (12%)
Query: 10 NFSDKNLIGEGKFGEVYKGLLQD-GMLVAIKKRPGAPTQEFID-EVCFLASIQHRNLVTL 67
+++D +IG G FG VY+ L D G LVAIKK + F + E+ + + H N+V L
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKNRELQIMRKLDHCNIVRL 79
Query: 68 L------GYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXX 121
G ++ L+ +Y+P +V+R K L +
Sbjct: 80 RYFFYSSGEKKDEVYLNLVLDYVPETVY--------RVARHYSRAKQTLPVIYVKLYMYQ 131
Query: 122 XXXXXXP----RVVHKDFKTANVLVDED-FIAKVADAGLRNFLGRTDVAGPSSQVTADEI 176
+ H+D K N+L+D D + K+ D G L R + P+
Sbjct: 132 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE---PNVSXICSRY 188
Query: 177 FLASE-VKEFRRFSEKSDVYSFGVFLLELVSGR 208
+ A E + ++ DV+S G L EL+ G+
Sbjct: 189 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 27/213 (12%)
Query: 10 NFSDKNLIGEGKFGEVYKGLLQD-GMLVAIKKRPGAPTQEFID-EVCFLASIQHRNLVTL 67
+++D +IG G FG VY+ L D G LVAIKK + F + E+ + + H N+V L
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--LQDKRFKNRELQIMRKLDHCNIVRL 112
Query: 68 L------GYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXX 121
G ++ L+ +Y+P +Y +V+R K L +
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPET-----VY---RVARHYSRAKQTLPVIYVKLYMYQ 164
Query: 122 XXXXXXP----RVVHKDFKTANVLVDED-FIAKVADAGLRNFLGRTDVAGPSSQVTADEI 176
+ H+D K N+L+D D + K+ D G L R + P+
Sbjct: 165 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE---PNVSYICSRY 221
Query: 177 FLASE-VKEFRRFSEKSDVYSFGVFLLELVSGR 208
+ A E + ++ DV+S G L EL+ G+
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 90/211 (42%), Gaps = 17/211 (8%)
Query: 4 LSLATKNFSDKNLIGEGKFGEVYK------GLLQDGMLVAIKKRPGAPTQEFIDEVCFLA 57
+ L +F + +G G G V+K GL+ L+ ++ +P A + I E+ L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIRNQIIRELQVLH 59
Query: 58 SIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXX 117
+V G + + E++ GS+ L ++ Q L ++SI
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQIL---GKVSIAVIKG 116
Query: 118 XXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIF 177
+++H+D K +N+LV+ K+ D G+ L + ++ +
Sbjct: 117 LTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSY 169
Query: 178 LASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
++ E + +S +SD++S G+ L+E+ GR
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 88/213 (41%), Gaps = 27/213 (12%)
Query: 10 NFSDKNLIGEGKFGEVYKGLLQD-GMLVAIKKRPGAPTQEFID-EVCFLASIQHRNLVTL 67
+++D +IG G FG VY+ L D G LVAIKK + F + E+ + + H N+V L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKNRELQIMRKLDHCNIVRL 78
Query: 68 L------GYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXX 121
G ++ L+ +Y+P +V+R K L +
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVY--------RVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 122 XXXXXXP----RVVHKDFKTANVLVDED-FIAKVADAGLRNFLGRTDVAGPSSQVTADEI 176
+ H+D K N+L+D D + K+ D G L R + P+
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE---PNVSXICSRY 187
Query: 177 FLASE-VKEFRRFSEKSDVYSFGVFLLELVSGR 208
+ A E + ++ DV+S G L EL+ G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 27/213 (12%)
Query: 10 NFSDKNLIGEGKFGEVYKGLLQD-GMLVAIKKRPGAPTQEFID-EVCFLASIQHRNLVTL 67
+++D +IG G FG VY+ L D G LVAIKK + F + E+ + + H N+V L
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--LQDKRFKNRELQIMRKLDHCNIVRL 114
Query: 68 L------GYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXX 121
G ++ L+ +Y+P +Y +V+R K L +
Sbjct: 115 RYFFYSSGEKKDEVYLNLVLDYVPET-----VY---RVARHYSRAKQTLPVIYVKLYMYQ 166
Query: 122 XXXXXXP----RVVHKDFKTANVLVDED-FIAKVADAGLRNFLGRTDVAGPSSQVTADEI 176
+ H+D K N+L+D D + K+ D G L R + P+
Sbjct: 167 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE---PNVSYICSRY 223
Query: 177 FLASE-VKEFRRFSEKSDVYSFGVFLLELVSGR 208
+ A E + ++ DV+S G L EL+ G+
Sbjct: 224 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 91/213 (42%), Gaps = 27/213 (12%)
Query: 10 NFSDKNLIGEGKFGEVYKGLLQD-GMLVAIKKRPGAPTQEFID-EVCFLASIQHRNLVTL 67
+++D +IG G FG VY+ L D G LVAIKK + F + E+ + + H N+V L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQG--KAFKNRELQIMRKLDHCNIVRL 78
Query: 68 L------GYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXX 121
G ++ L+ +Y+P +++ +V+R K L +
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVP---ATVY-----RVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 122 XXXXXXP----RVVHKDFKTANVLVDED-FIAKVADAGLRNFLGRTDVAGPSSQVTADEI 176
+ H+D K N+L+D D + K+ D G L R + P+
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE---PNVSXICSRY 187
Query: 177 FLASE-VKEFRRFSEKSDVYSFGVFLLELVSGR 208
+ A E + ++ DV+S G L EL+ G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 88/213 (41%), Gaps = 27/213 (12%)
Query: 10 NFSDKNLIGEGKFGEVYKGLLQD-GMLVAIKKRPGAPTQEFID-EVCFLASIQHRNLVTL 67
+++D +IG G FG VY+ L D G LVAIKK + F + E+ + + H N+V L
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKNRELQIMRKLDHCNIVRL 86
Query: 68 L------GYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXX 121
G ++ L+ +Y+P +V+R K L +
Sbjct: 87 RYFFYSSGEKKDEVYLNLVLDYVPETVY--------RVARHYSRAKQTLPVIYVKLYMYQ 138
Query: 122 XXXXXXP----RVVHKDFKTANVLVDED-FIAKVADAGLRNFLGRTDVAGPSSQVTADEI 176
+ H+D K N+L+D D + K+ D G L R + P+
Sbjct: 139 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE---PNVSXICSRY 195
Query: 177 FLASE-VKEFRRFSEKSDVYSFGVFLLELVSGR 208
+ A E + ++ DV+S G L EL+ G+
Sbjct: 196 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQ-VTADEIFLASEVKEFRR 187
RV+H+D K N+ ++ED K+ D GL + + G + + ++A EV +
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLAT---KVEYDGERKKTLCGTPNYIAPEVLSKKG 193
Query: 188 FSEKSDVYSFGVFLLELVSGR 208
S + DV+S G + L+ G+
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGK 214
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 88/213 (41%), Gaps = 27/213 (12%)
Query: 10 NFSDKNLIGEGKFGEVYKGLLQD-GMLVAIKKRPGAPTQEFID-EVCFLASIQHRNLVTL 67
+++D +IG G FG VY+ L D G LVAIKK + F + E+ + + H N+V L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKNRELQIMRKLDHCNIVRL 78
Query: 68 L------GYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXX 121
G ++ L+ +Y+P +V+R K L +
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVY--------RVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 122 XXXXXXP----RVVHKDFKTANVLVDED-FIAKVADAGLRNFLGRTDVAGPSSQVTADEI 176
+ H+D K N+L+D D + K+ D G L R + P+
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE---PNVSXICSRY 187
Query: 177 FLASE-VKEFRRFSEKSDVYSFGVFLLELVSGR 208
+ A E + ++ DV+S G L EL+ G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 88/213 (41%), Gaps = 27/213 (12%)
Query: 10 NFSDKNLIGEGKFGEVYKGLLQD-GMLVAIKKRPGAPTQEFID-EVCFLASIQHRNLVTL 67
+++D +IG G FG VY+ L D G LVAIKK + F + E+ + + H N+V L
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--LQDKRFKNRELQIMRKLDHCNIVRL 90
Query: 68 L------GYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXX 121
G ++ L+ +Y+P +V+R K L +
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPETVY--------RVARHYSRAKQTLPVIYVKLYMYQ 142
Query: 122 XXXXXXP----RVVHKDFKTANVLVDED-FIAKVADAGLRNFLGRTDVAGPSSQVTADEI 176
+ H+D K N+L+D D + K+ D G L R + P+
Sbjct: 143 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE---PNVSXICSRY 199
Query: 177 FLASE-VKEFRRFSEKSDVYSFGVFLLELVSGR 208
+ A E + ++ DV+S G L EL+ G+
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 27/213 (12%)
Query: 10 NFSDKNLIGEGKFGEVYKGLLQD-GMLVAIKKRPGAPTQEFID-EVCFLASIQHRNLVTL 67
+++D +IG G FG VY+ L D G LVAIKK + F + E+ + + H N+V L
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--LQDKRFKNRELQIMRKLDHCNIVRL 157
Query: 68 L------GYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXX 121
G ++ L+ +Y+P +Y +V+R K L +
Sbjct: 158 RYFFYSSGEKKDEVYLNLVLDYVPET-----VY---RVARHYSRAKQTLPVIYVKLYMYQ 209
Query: 122 XXXXXXP----RVVHKDFKTANVLVDED-FIAKVADAGLRNFLGRTDVAGPSSQVTADEI 176
+ H+D K N+L+D D + K+ D G L R + P+
Sbjct: 210 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE---PNVSYICSRY 266
Query: 177 FLASE-VKEFRRFSEKSDVYSFGVFLLELVSGR 208
+ A E + ++ DV+S G L EL+ G+
Sbjct: 267 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 64/153 (41%), Gaps = 16/153 (10%)
Query: 61 HRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXX 120
H N++ L + N FL+++ + G + +L +K+ + +
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-------TEKVTLSEKETRKIMRALLE 122
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
+VH+D K N+L+D+D K+ D G F + D +V +LA
Sbjct: 123 VICALHKLNIVHRDLKPENILLDDDMNIKLTDFG---FSCQLDPGEKLREVCGTPSYLAP 179
Query: 181 EVKEFRR------FSEKSDVYSFGVFLLELVSG 207
E+ E + ++ D++S GV + L++G
Sbjct: 180 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQ-VTADEIFLASEVKEFRR 187
RV+H+D K N+ ++ED K+ D GL + + G + + ++A EV +
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLAT---KVEYDGERKKTLCGTPNYIAPEVLSKKG 193
Query: 188 FSEKSDVYSFGVFLLELVSGR 208
S + DV+S G + L+ G+
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGK 214
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 82/209 (39%), Gaps = 19/209 (9%)
Query: 9 KNFSDKNLIGEGKFGEV---YKGLLQDGMLVAIKK--RP---GAPTQEFIDEVCFLASIQ 60
K + + IG G G V Y +L+ VAIKK RP + E+ + +
Sbjct: 29 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 86
Query: 61 HRNLVTLLG-YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
H+N++ LL + + +L+ YI + L + ++E H
Sbjct: 87 HKNIIGLLNVFTPQKSLEEFQDVYI-----VMELMDANLCQVIQMELDHERMSYLLYQML 141
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
++H+D K +N++V D K+ D GL G + + P + A
Sbjct: 142 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP---YVVTRYYRA 198
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
EV + E D++S G + E+V +
Sbjct: 199 PEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 90/211 (42%), Gaps = 17/211 (8%)
Query: 4 LSLATKNFSDKNLIGEGKFGEVYK------GLLQDGMLVAIKKRPGAPTQEFIDEVCFLA 57
+ L +F + +G G G V+K GL+ L+ ++ +P A + I E+ L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIRNQIIRELQVLH 59
Query: 58 SIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXX 117
+V G + + E++ GS+ L ++ Q L ++SI
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG---KVSIAVIKG 116
Query: 118 XXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIF 177
+++H+D K +N+LV+ K+ D G+ L + ++ +
Sbjct: 117 LTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSY 169
Query: 178 LASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
++ E + +S +SD++S G+ L+E+ GR
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 88/213 (41%), Gaps = 27/213 (12%)
Query: 10 NFSDKNLIGEGKFGEVYKGLLQD-GMLVAIKKRPGAPTQEFID-EVCFLASIQHRNLVTL 67
+++D +IG G FG VY+ L D G LVAIKK + F + E+ + + H N+V L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKNRELQIMRKLDHCNIVRL 78
Query: 68 L------GYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXX 121
G ++ L+ +Y+P +V+R K L +
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVY--------RVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 122 XXXXXXP----RVVHKDFKTANVLVDED-FIAKVADAGLRNFLGRTDVAGPSSQVTADEI 176
+ H+D K N+L+D D + K+ D G L R + P+
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE---PNVSYICSRY 187
Query: 177 FLASE-VKEFRRFSEKSDVYSFGVFLLELVSGR 208
+ A E + ++ DV+S G L EL+ G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 27/213 (12%)
Query: 10 NFSDKNLIGEGKFGEVYKGLLQD-GMLVAIKKRPGAPTQEFID-EVCFLASIQHRNLVTL 67
+++D +IG G FG VY+ L D G LVAIKK + F + E+ + + H N+V L
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--LQDKRFKNRELQIMRKLDHCNIVRL 116
Query: 68 L------GYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXX 121
G ++ L+ +Y+P +Y +V+R K L +
Sbjct: 117 RYFFYSSGEKKDEVYLNLVLDYVPET-----VY---RVARHYSRAKQTLPVIYVKLYMYQ 168
Query: 122 XXXXXXP----RVVHKDFKTANVLVDED-FIAKVADAGLRNFLGRTDVAGPSSQVTADEI 176
+ H+D K N+L+D D + K+ D G L R + P+
Sbjct: 169 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE---PNVSYICSRY 225
Query: 177 FLASE-VKEFRRFSEKSDVYSFGVFLLELVSGR 208
+ A E + ++ DV+S G L EL+ G+
Sbjct: 226 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 85/209 (40%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 89 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ D GL TD + A + A
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR---HTD--DEMTGYVATRWYRAP 191
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ +++ D++S G + EL++GR
Sbjct: 192 EIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 88/213 (41%), Gaps = 27/213 (12%)
Query: 10 NFSDKNLIGEGKFGEVYKGLLQD-GMLVAIKKRPGAPTQEFID-EVCFLASIQHRNLVTL 67
+++D +IG G FG VY+ L D G LVAIKK + F + E+ + + H N+V L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQG--KAFKNRELQIMRKLDHCNIVRL 78
Query: 68 L------GYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXX 121
G ++ L+ +Y+P +V+R K L +
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVY--------RVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 122 XXXXXXP----RVVHKDFKTANVLVDED-FIAKVADAGLRNFLGRTDVAGPSSQVTADEI 176
+ H+D K N+L+D D + K+ D G L R + P+
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE---PNVSYICSRY 187
Query: 177 FLASE-VKEFRRFSEKSDVYSFGVFLLELVSGR 208
+ A E + ++ DV+S G L EL+ G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 27/213 (12%)
Query: 10 NFSDKNLIGEGKFGEVYKGLLQD-GMLVAIKKRPGAPTQEFID-EVCFLASIQHRNLVTL 67
+++D +IG G FG VY+ L D G LVAIKK + F + E+ + + H N+V L
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--LQDKRFKNRELQIMRKLDHCNIVRL 112
Query: 68 L------GYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXX 121
G ++ L+ +Y+P +Y +V+R K L +
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPET-----VY---RVARHYSRAKQTLPVIYVKLYMYQ 164
Query: 122 XXXXXXP----RVVHKDFKTANVLVDED-FIAKVADAGLRNFLGRTDVAGPSSQVTADEI 176
+ H+D K N+L+D D + K+ D G L R + P+
Sbjct: 165 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE---PNVSXICSRY 221
Query: 177 FLASE-VKEFRRFSEKSDVYSFGVFLLELVSGR 208
+ A E + ++ DV+S G L EL+ G+
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 68/152 (44%), Gaps = 21/152 (13%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFL----GRTDVAGPSSQVTADEIFLASEVKEF 185
V+H+D K +NVL++ K+ D G+ +L + AG + + I E+ +
Sbjct: 131 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERI--NPELNQ- 187
Query: 186 RRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLWS 245
+ +S KSD++S G+ ++EL R F L ++++E
Sbjct: 188 KGYSVKSDIWSLGITMIELAILRFPYDSW--------------GTPFQQLKQVVEEPSPQ 233
Query: 246 TFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
++ EF+ +CL +S+ RP+ +++
Sbjct: 234 LPADKFSAEFVDFTSQCLKKNSKERPTYPELM 265
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 83/209 (39%), Gaps = 22/209 (10%)
Query: 10 NFSDKNLIGEGKFGEV----------YKGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
+F L+G+G FG+V Y + V I K A T + E L +
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT---VTESRVLQNT 62
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
+H L L Q ++ + EY G + HL SR+++ F +
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL------SRERV-FTEERARFYGAEIV 115
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
VV++D K N+++D+D K+ D GL G +D A E +LA
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPE-YLA 173
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
EV E + D + GV + E++ GR
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 80/198 (40%), Gaps = 17/198 (8%)
Query: 17 IGEGKFGEVYKGLLQDGMLVA----IKKRPGAPTQEFIDEVCFLASIQHRNLVTLLGYCQ 72
+ E GE++KG Q +V ++ +++F +E L H N++ +LG CQ
Sbjct: 18 LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQ 77
Query: 73 ENNLQF--LIYEYIPNGSVSIHLY-GPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPR 129
LI + P GS+ L+ G + V Q K L P
Sbjct: 78 SPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDX----ARGXAFLHTLEPL 133
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLR-NFLGRTDVAGPSSQVTADEIFLASEVKEFRRF 188
+ + +V +DED A+++ A ++ +F P+ A E RR
Sbjct: 134 IPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRXYAPA--WVAPEALQKKPEDTNRR- 190
Query: 189 SEKSDVYSFGVFLLELVS 206
+D +SF V L ELV+
Sbjct: 191 --SADXWSFAVLLWELVT 206
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 27/213 (12%)
Query: 10 NFSDKNLIGEGKFGEVYKGLLQD-GMLVAIKKRPGAPTQEFID-EVCFLASIQHRNLVTL 67
+++D +IG G FG VY+ L D G LVAIKK + F + E+ + + H N+V L
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--LQDKRFKNRELQIMRKLDHCNIVRL 106
Query: 68 L------GYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXX 121
G ++ L+ +Y+P +Y +V+R K L +
Sbjct: 107 RYFFYSSGEKKDEVYLNLVLDYVPET-----VY---RVARHYSRAKQTLPVIYVKLYMYQ 158
Query: 122 XXXXXXP----RVVHKDFKTANVLVDED-FIAKVADAGLRNFLGRTDVAGPSSQVTADEI 176
+ H+D K N+L+D D + K+ D G L R + P+
Sbjct: 159 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE---PNVSYICSRY 215
Query: 177 FLASE-VKEFRRFSEKSDVYSFGVFLLELVSGR 208
+ A E + ++ DV+S G L EL+ G+
Sbjct: 216 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQ-VTADEIFLASEVKEFRR 187
RV+H+D K N+ ++ED K+ D GL + + G + + ++A EV +
Sbjct: 141 RVIHRDLKLGNLFLNEDLEVKIGDFGLAT---KVEYDGERKKTLCGTPNYIAPEVLSKKG 197
Query: 188 FSEKSDVYSFGVFLLELVSGR 208
S + DV+S G + L+ G+
Sbjct: 198 HSFEVDVWSIGCIMYTLLVGK 218
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 91/213 (42%), Gaps = 27/213 (12%)
Query: 10 NFSDKNLIGEGKFGEVYKGLLQD-GMLVAIKKRPGAPTQEFID-EVCFLASIQHRNLVTL 67
+++D +IG G FG VY+ L D G LVAIKK + F + E+ + + H N+V L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKNRELQIMRKLDHCNIVRL 78
Query: 68 LGY----CQENNLQF--LIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXX 121
+ ++ ++ + L+ +Y+P +V+R K L +
Sbjct: 79 RYFFYSSGEKKDVVYLNLVLDYVPETVY--------RVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 122 XXXXXXP----RVVHKDFKTANVLVDED-FIAKVADAGLRNFLGRTDVAGPSSQVTADEI 176
+ H+D K N+L+D D + K+ D G L R + P+
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE---PNVSXICSRY 187
Query: 177 FLASE-VKEFRRFSEKSDVYSFGVFLLELVSGR 208
+ A E + ++ DV+S G L EL+ G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 88/209 (42%), Gaps = 17/209 (8%)
Query: 6 LATKNFSDKNLIGEGKFGEVYK------GLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
L +F + +G G G V+K GL+ L+ ++ +P Q I E+ L
Sbjct: 30 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ-IIRELQVLHEC 88
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
+V G + + E++ GS+ L ++ Q L ++SI
Sbjct: 89 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQIL---GKVSIAVIKGLT 145
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
+++H+D K +N+LV+ K+ D G+ L + ++ +++
Sbjct: 146 YLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSYMS 198
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
E + +S +SD++S G+ L+E+ GR
Sbjct: 199 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 88/213 (41%), Gaps = 27/213 (12%)
Query: 10 NFSDKNLIGEGKFGEVYKGLLQD-GMLVAIKKRPGAPTQEFID-EVCFLASIQHRNLVTL 67
+++D +IG G FG VY+ L D G LVAIKK + F + E+ + + H N+V L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQG--KAFKNRELQIMRKLDHCNIVRL 78
Query: 68 L------GYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXX 121
G ++ L+ +Y+P +V+R K L +
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVY--------RVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 122 XXXXXXP----RVVHKDFKTANVLVDED-FIAKVADAGLRNFLGRTDVAGPSSQVTADEI 176
+ H+D K N+L+D D + K+ D G L R + P+
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE---PNVSYICSRY 187
Query: 177 FLASE-VKEFRRFSEKSDVYSFGVFLLELVSGR 208
+ A E + ++ DV+S G L EL+ G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 82/209 (39%), Gaps = 19/209 (9%)
Query: 9 KNFSDKNLIGEGKFGEV---YKGLLQDGMLVAIKK--RP---GAPTQEFIDEVCFLASIQ 60
K + + IG G G V Y +L+ VAIKK RP + E+ + +
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 75
Query: 61 HRNLVTLLG-YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
H+N++ LL + + +L+ YI + L + ++E H
Sbjct: 76 HKNIIGLLNVFTPQKSLEEFQDVYI-----VMELMDANLCQVIQMELDHERMSYLLYQML 130
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
++H+D K +N++V D K+ D GL G + + P + A
Sbjct: 131 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP---YVVTRYYRA 187
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
EV + E D++S G + E+V +
Sbjct: 188 PEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 83/209 (39%), Gaps = 22/209 (10%)
Query: 10 NFSDKNLIGEGKFGEV----------YKGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
+F L+G+G FG+V Y + V I K A T + E L +
Sbjct: 11 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT---VTESRVLQNT 67
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
+H L L Q ++ + EY G + HL SR+++ F +
Sbjct: 68 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL------SRERV-FTEERARFYGAEIV 120
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
VV++D K N+++D+D K+ D GL G +D A E +LA
Sbjct: 121 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPE-YLA 178
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
EV E + D + GV + E++ GR
Sbjct: 179 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 84/204 (41%), Gaps = 18/204 (8%)
Query: 5 SLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASIQHRNL 64
+L T +F L+ + G Y + D V K+ + ++E L ++ L
Sbjct: 49 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQ----IEHTLNEKRILQAVNFPFL 104
Query: 65 VTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXX 124
V L ++N+ +++ EY P G + HL + S F +
Sbjct: 105 VKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD-- 162
Query: 125 XXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEVK 183
++++D K N+++D+ KV D G + GRT + + A EI L+
Sbjct: 163 -----LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS---- 213
Query: 184 EFRRFSEKSDVYSFGVFLLELVSG 207
+ +++ D ++ GV + E+ +G
Sbjct: 214 --KGYNKAVDWWALGVLIYEMAAG 235
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 84/207 (40%), Gaps = 25/207 (12%)
Query: 12 SDKNLIGEGKFGEVYKGL-LQDGMLVA---IKKRPGAPTQEFIDEVCFLASIQHRNLVTL 67
S ++G G+FG+V+K G+ +A IK R +E +E+ + + H NL+ L
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 68 LGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXX 127
+ N L+ EY+ G + ++ + +I
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELF------DRIIDESYNLTELDTILFMKQICEGIRHMHQ 205
Query: 128 PRVVHKDFKTANVL-VDEDFIA-KVADAGL-RNFLGR----TDVAGPSSQVTADEIFLAS 180
++H D K N+L V+ D K+ D GL R + R + P FLA
Sbjct: 206 MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPE--------FLAP 257
Query: 181 EVKEFRRFSEKSDVYSFGVFLLELVSG 207
EV + S +D++S GV L+SG
Sbjct: 258 EVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 20/208 (9%)
Query: 8 TKNFSDKNLIGEGKFGE----VYKGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASIQHRN 63
T + K IG G + ++K + + I K PT+E E+ L QH N
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEI--EI-LLRYGQHPN 77
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXX 123
++TL + +++ E + G + ++ RQK F R +
Sbjct: 78 IITLKDVYDDGKYVYVVTELMKGGELL------DKILRQKF-FSEREASAVLFTITKTVE 130
Query: 124 XXXXPRVVHKDFKTANVL-VDEDFIA---KVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
VVH+D K +N+L VDE ++ D G L + + TA+ F+A
Sbjct: 131 YLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTAN--FVA 188
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSG 207
EV E + + D++S GV L +++G
Sbjct: 189 PEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 85/204 (41%), Gaps = 18/204 (8%)
Query: 5 SLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASIQHRNL 64
+L T +F L+ + G Y + D V K+ + ++E L ++ L
Sbjct: 41 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQ----IEHTLNEKRILQAVNFPFL 96
Query: 65 VTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXX 124
V L ++N+ +++ EY+P G + HL R+ F +
Sbjct: 97 VKLEFSFKDNSNLYMVMEYVPGGEMFSHL-------RRIGRFXEPHARFYAAQIVLTFEY 149
Query: 125 XXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEVK 183
++++D K N+L+D+ +V D G + GRT + + A EI L+
Sbjct: 150 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS---- 205
Query: 184 EFRRFSEKSDVYSFGVFLLELVSG 207
+ +++ D ++ GV + E+ +G
Sbjct: 206 --KGYNKAVDWWALGVLIYEMAAG 227
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 99/238 (41%), Gaps = 18/238 (7%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI--QHRNLVTLLG---YC 71
+G+G++GEV++G Q G VA+K + + E ++ +H N++ +
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTS 103
Query: 72 QENNLQ-FLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV 130
+ ++ Q +LI Y GS+ +L + + L ++ P +
Sbjct: 104 RHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAI 163
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLRNF---------LGRTDVAGPSSQVTADEIFLASE 181
H+D K+ N+LV ++ +AD GL +G G + + + +
Sbjct: 164 AHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQ 223
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKIL 239
V F + ++ D+++FG+ L E V+ R ++V N F ++ K++
Sbjct: 224 VDCFDSY-KRVDIWAFGLVLWE-VARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVV 279
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 82/209 (39%), Gaps = 19/209 (9%)
Query: 9 KNFSDKNLIGEGKFGEV---YKGLLQDGMLVAIKK--RP---GAPTQEFIDEVCFLASIQ 60
K + + IG G G V Y +L+ VAIKK RP + E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 61 HRNLVTLLG-YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
H+N++ LL + + +L+ YI + L + ++E H
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYI-----VMELMDANLCQVIQMELDHERMSYLLYQML 136
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
++H+D K +N++V D K+ D GL G + + P + A
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPE---VVTRYYRA 193
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
EV + E D++S G + E+V +
Sbjct: 194 PEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 68/159 (42%), Gaps = 14/159 (8%)
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
++E L ++ LV L ++N+ +++ EY P G + HL + S F
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPS 168
+ ++++D K N+++D+ KV D G + GRT +
Sbjct: 149 QIVLTFEYLHSLD-------LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGT 201
Query: 169 SQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A EI L+ + +++ D ++ GV + E+ +G
Sbjct: 202 PEYLAPEIILS------KGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G VA+KK P Q I E+ L ++H N++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 108
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 109 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 158
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLA 179
++H+D K +N+ V+ED K+ D GL R+ + A EI L
Sbjct: 159 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATRWYRAPEIML- 215
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
+ +++ D++S G + EL++GR
Sbjct: 216 ----NWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 69/159 (43%), Gaps = 14/159 (8%)
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
++E L ++ LV L ++N+ +++ EY P G + HL + S F
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPS 168
+ ++++D K N+++D+ +V D GL + GRT +
Sbjct: 149 QIVLTFEYLHSLD-------LIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGT 201
Query: 169 SQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A EI L+ + +++ D ++ GV + E+ +G
Sbjct: 202 PEYLAPEIILS------KGYNKAVDWWALGVLIYEMAAG 234
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 89/209 (42%), Gaps = 17/209 (8%)
Query: 6 LATKNFSDKNLIGEGKFGEVYK------GLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
L +F + +G G G V+K GL+ L+ ++ +P A + I E+ L
Sbjct: 22 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIRNQIIRELQVLHEC 80
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
+V G + + E++ GS+ L ++ Q L ++SI
Sbjct: 81 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQIL---GKVSIAVIKGLT 137
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
+++H+D K +N+LV+ K+ D G+ L + ++ +++
Sbjct: 138 YLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSYMS 190
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
E + +S +SD++S G+ L+E+ GR
Sbjct: 191 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 83/209 (39%), Gaps = 22/209 (10%)
Query: 10 NFSDKNLIGEGKFGEV----------YKGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
+F L+G+G FG+V Y + V I K A T + E L +
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT---VTESRVLQNT 62
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
+H L L Q ++ + EY G + HL SR+++ + R
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL------SRERVFTEERARFYGAEIVS 116
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
VV++D K N+++D+D K+ D GL G +D A E +LA
Sbjct: 117 ALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPE-YLA 173
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
EV E + D + GV + E++ GR
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 64/153 (41%), Gaps = 16/153 (10%)
Query: 61 HRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXX 120
H N++ L + N FL+++ + G + +L +K+ + +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-------TEKVTLSEKETRKIMRALLE 135
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
+VH+D K N+L+D+D K+ D G F + D +V +LA
Sbjct: 136 VICALHKLNIVHRDLKPENILLDDDMNIKLTDFG---FSCQLDPGEKLREVCGTPSYLAP 192
Query: 181 EVKEFRR------FSEKSDVYSFGVFLLELVSG 207
E+ E + ++ D++S GV + L++G
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 99/238 (41%), Gaps = 18/238 (7%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI--QHRNLVTLLG---YC 71
+G+G++GEV++G Q G VA+K + + E ++ +H N++ +
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTS 74
Query: 72 QENNLQ-FLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV 130
+ ++ Q +LI Y GS+ +L + + L ++ P +
Sbjct: 75 RHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAI 134
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLRNF---------LGRTDVAGPSSQVTADEIFLASE 181
H+D K+ N+LV ++ +AD GL +G G + + + +
Sbjct: 135 AHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQ 194
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKIL 239
V F + ++ D+++FG+ L E V+ R ++V N F ++ K++
Sbjct: 195 VDCFDSY-KRVDIWAFGLVLWE-VARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVV 250
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 69/159 (43%), Gaps = 14/159 (8%)
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
++E L ++ LV L ++N+ +++ EY+P G + HL R+ F
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-------RRIGRFXEP 141
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPS 168
+ ++++D K N+L+D+ +V D G + GRT +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 169 SQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A EI L+ + +++ D ++ GV + E+ +G
Sbjct: 202 PEYLAPEIILS------KGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 85/205 (41%), Gaps = 28/205 (13%)
Query: 16 LIGEGKFGEVYKG---LLQDGMLVAIKKRPGAP---TQEFIDEVCFLASIQHRNLVTLLG 69
++G+G FGEV K + Q V + + A T + EV L + H N++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 70 YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPR 129
++++ +++ E G + + + R++ F +
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEI-----IKRKR--FSEHDAARIIKQVFSGITYMHKHN 141
Query: 130 VVHKDFKTANVLVD---EDFIAKVADAGLRNFLGRT----DVAGPSSQVTADEIFLASEV 182
+VH+D K N+L++ +D K+ D GL + D G + + A E+ +
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYI-APEVLRGT-- 198
Query: 183 KEFRRFSEKSDVYSFGVFLLELVSG 207
+ EK DV+S GV L L+SG
Sbjct: 199 -----YDEKCDVWSAGVILYILLSG 218
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 89/219 (40%), Gaps = 22/219 (10%)
Query: 1 MEELSLATKNFSDKNLIGEGKFGEVY-------KGLLQDGMLVAIKKRPGAPTQEFIDEV 53
+ +L + +++ +IG G FGEV + + +L + + + F +E
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 54 CFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIX 113
+A +V L Q++ +++ EY+P G + ++L V + F +
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDL-VNLMSNYDVPEKWARFYTAEVVL 184
Query: 114 XXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-----RNFLGRTDVAGPS 168
+H+D K N+L+D+ K+AD G + + R D A +
Sbjct: 185 ALDAIHSMG-------FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGT 237
Query: 169 SQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ E+ + + + + D +S GVFL E++ G
Sbjct: 238 PDYISPEVLKSQGGDGY--YGRECDWWSVGVFLYEMLVG 274
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 69/159 (43%), Gaps = 14/159 (8%)
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
++E L ++ LV L ++N+ +++ EY+P G + HL R+ F
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-------RRIGRFXEP 142
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPS 168
+ ++++D K N+L+D+ +V D G + GRT +
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 202
Query: 169 SQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A EI L+ + +++ D ++ GV + E+ +G
Sbjct: 203 PEYLAPEIILS------KGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 69/159 (43%), Gaps = 14/159 (8%)
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
++E L ++ LV L ++N+ +++ EY+P G + HL R+ F
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-------RRIGRFXEP 141
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPS 168
+ ++++D K N+L+D+ +V D G + GRT +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 169 SQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A EI L+ + +++ D ++ GV + E+ +G
Sbjct: 202 PEYLAPEIILS------KGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 90/209 (43%), Gaps = 17/209 (8%)
Query: 6 LATKNFSDKNLIGEGKFGEVYK------GLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
L +F + +G G G V+K GL+ L+ ++ +P A + I E+ L
Sbjct: 6 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIRNQIIRELQVLHEC 64
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
+V G + + E++ GS+ L ++ Q L ++SI
Sbjct: 65 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG---KVSIAVIKGLT 121
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
+++H+D K +N+LV+ K+ D G+ L + +++ +++
Sbjct: 122 YLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDEMANEFVGTRSYMS 174
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
E + +S +SD++S G+ L+E+ GR
Sbjct: 175 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 39/78 (50%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
++H+D K N+L++ED ++ D G L ++ +++ E+ +
Sbjct: 131 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 190
Query: 190 EKSDVYSFGVFLLELVSG 207
+ SD+++ G + +LV+G
Sbjct: 191 KSSDLWALGCIIYQLVAG 208
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 85/205 (41%), Gaps = 28/205 (13%)
Query: 16 LIGEGKFGEVYKG---LLQDGMLVAIKKRPGAP---TQEFIDEVCFLASIQHRNLVTLLG 69
++G+G FGEV K + Q V + + A T + EV L + H N++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 70 YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPR 129
++++ +++ E G + + + R++ F +
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEI-----IKRKR--FSEHDAARIIKQVFSGITYMHKHN 141
Query: 130 VVHKDFKTANVLVD---EDFIAKVADAGLRNFLGRT----DVAGPSSQVTADEIFLASEV 182
+VH+D K N+L++ +D K+ D GL + D G + + A E+ +
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYI-APEVLRGT-- 198
Query: 183 KEFRRFSEKSDVYSFGVFLLELVSG 207
+ EK DV+S GV L L+SG
Sbjct: 199 -----YDEKCDVWSAGVILYILLSG 218
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 99/238 (41%), Gaps = 18/238 (7%)
Query: 17 IGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI--QHRNLVTLLG---YC 71
+G+G++GEV++G Q G VA+K + + E ++ +H N++ +
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTS 74
Query: 72 QENNLQ-FLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRV 130
+ ++ Q +LI Y GS+ +L + + L ++ P +
Sbjct: 75 RHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAI 134
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLRNF---------LGRTDVAGPSSQVTADEIFLASE 181
H+D K+ N+LV ++ +AD GL +G G + + + +
Sbjct: 135 AHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQ 194
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKIL 239
V F + ++ D+++FG+ L E V+ R ++V N F ++ K++
Sbjct: 195 VDCFDSY-KRVDIWAFGLVLWE-VARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVV 250
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 85/214 (39%), Gaps = 22/214 (10%)
Query: 5 SLATKNFSDKNLIGEGKFGEVYK-GLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI---- 59
S ++F + +G G +GEV+K +DG L A+K R +P + D LA +
Sbjct: 53 SFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVK-RSMSPFRGPKDRARKLAEVGSHE 111
Query: 60 ---QHRNLVTLLGYCQENNLQFLIYEYI-PNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
QH V L +E + +L E P+ +G S Q + +
Sbjct: 112 KVGQHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALA 171
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
+VH D K AN+ + K+ D GL LG AG D
Sbjct: 172 HLHSQG--------LVHLDVKPANIFLGPRGRCKLGDFGLLVELG---TAGAGEVQEGDP 220
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGRE 209
++A E+ + + +DV+S G+ +LE+ E
Sbjct: 221 RYMAPELLQ-GSYGTAADVFSLGLTILEVACNME 253
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 83/209 (39%), Gaps = 22/209 (10%)
Query: 10 NFSDKNLIGEGKFGEV----------YKGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
+F L+G+G FG+V Y + V I K A T + E L +
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT---VTESRVLQNT 62
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
+H L L Q ++ + EY G + HL SR+++ + R
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL------SRERVFTEERARFYGAEIVS 116
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
VV++D K N+++D+D K+ D GL G +D A E +LA
Sbjct: 117 ALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPE-YLA 173
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
EV E + D + GV + E++ GR
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVK-EFRRF 188
++H+D K +N+ V+ED K+ D GL TD + A + A E+ + +
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLAR---HTD--DEMTGYVATRWYRAPEIMLNWMHY 196
Query: 189 SEKSDVYSFGVFLLELVSGR 208
++ D++S G + EL++GR
Sbjct: 197 NQTVDIWSVGCIMAELLTGR 216
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 39/78 (50%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
++H+D K N+L++ED ++ D G L ++ +++ E+ +
Sbjct: 130 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 189
Query: 190 EKSDVYSFGVFLLELVSG 207
+ SD+++ G + +LV+G
Sbjct: 190 KSSDLWALGCIIYQLVAG 207
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 81/209 (38%), Gaps = 19/209 (9%)
Query: 9 KNFSDKNLIGEGKFGEV---YKGLLQDGMLVAIKK--RP---GAPTQEFIDEVCFLASIQ 60
K + + IG G G V Y +L VAIKK RP + E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVN 81
Query: 61 HRNLVTLLG-YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
H+N+++LL + + L E + + + L + ++E H
Sbjct: 82 HKNIISLLNVFTPQKTL-----EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQML 136
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
++H+D K +N++V D K+ D GL G + + P + A
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTP---YVVTRYYRA 193
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
EV + E D++S G + E+V +
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 39/78 (50%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
++H+D K N+L++ED ++ D G L ++ +++ E+ +
Sbjct: 154 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAC 213
Query: 190 EKSDVYSFGVFLLELVSG 207
+ SD+++ G + +LV+G
Sbjct: 214 KSSDLWALGCIIYQLVAG 231
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 39/78 (50%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
++H+D K N+L++ED ++ D G L ++ +++ E+ +
Sbjct: 128 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 187
Query: 190 EKSDVYSFGVFLLELVSG 207
+ SD+++ G + +LV+G
Sbjct: 188 KSSDLWALGCIIYQLVAG 205
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 39/78 (50%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
++H+D K N+L++ED ++ D G L ++ +++ E+ +
Sbjct: 129 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 188
Query: 190 EKSDVYSFGVFLLELVSG 207
+ SD+++ G + +LV+G
Sbjct: 189 KSSDLWALGCIIYQLVAG 206
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 89/219 (40%), Gaps = 22/219 (10%)
Query: 1 MEELSLATKNFSDKNLIGEGKFGEVY-------KGLLQDGMLVAIKKRPGAPTQEFIDEV 53
+ +L + +++ +IG G FGEV + + +L + + + F +E
Sbjct: 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 120
Query: 54 CFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIX 113
+A +V L Q++ +++ EY+P G + ++L V + F +
Sbjct: 121 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDL-VNLMSNYDVPEKWARFYTAEVVL 179
Query: 114 XXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-----RNFLGRTDVAGPS 168
+H+D K N+L+D+ K+AD G + + R D A +
Sbjct: 180 ALDAIHSMG-------FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGT 232
Query: 169 SQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ E+ + + + + D +S GVFL E++ G
Sbjct: 233 PDYISPEVLKSQGGDGY--YGRECDWWSVGVFLYEMLVG 269
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 89/219 (40%), Gaps = 22/219 (10%)
Query: 1 MEELSLATKNFSDKNLIGEGKFGEVY-------KGLLQDGMLVAIKKRPGAPTQEFIDEV 53
+ +L + +++ +IG G FGEV + + +L + + + F +E
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 54 CFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIX 113
+A +V L Q++ +++ EY+P G + ++L V + F +
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDL-VNLMSNYDVPEKWARFYTAEVVL 184
Query: 114 XXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-----RNFLGRTDVAGPS 168
+H+D K N+L+D+ K+AD G + + R D A +
Sbjct: 185 ALDAIHSMG-------FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGT 237
Query: 169 SQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ E+ + + + + D +S GVFL E++ G
Sbjct: 238 PDYISPEVLKSQGGDGY--YGRECDWWSVGVFLYEMLVG 274
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 82/205 (40%), Gaps = 11/205 (5%)
Query: 11 FSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKKRPGAPTQEF----IDEVCFLASIQHRNLV 65
++ IGEG +G V VAIKK Q + + E+ L +H N++
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 66 TLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
+ + + L+ + YI + LY + Q+L H
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDLY--KLLKSQQLSNDHICYFLYQILRGLKYIHS 162
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLG-RTDVAGPSSQVTADEIFLASEVK- 183
V+H+D K +N+L++ K+ D GL D G ++ A + A E+
Sbjct: 163 A--NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIML 220
Query: 184 EFRRFSEKSDVYSFGVFLLELVSGR 208
+ +++ D++S G L E++S R
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 39/78 (50%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
++H+D K N+L++ED ++ D G L ++ +++ E+ +
Sbjct: 158 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 217
Query: 190 EKSDVYSFGVFLLELVSG 207
+ SD+++ G + +LV+G
Sbjct: 218 KSSDLWALGCIIYQLVAG 235
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 39/78 (50%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
++H+D K N+L++ED ++ D G L ++ +++ E+ +
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAC 209
Query: 190 EKSDVYSFGVFLLELVSG 207
+ SD+++ G + +LV+G
Sbjct: 210 KSSDLWALGCIIYQLVAG 227
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 39/78 (50%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
++H+D K N+L++ED ++ D G L ++ +++ E+ +
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 210
Query: 190 EKSDVYSFGVFLLELVSG 207
+ SD+++ G + +LV+G
Sbjct: 211 KSSDLWALGCIIYQLVAG 228
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 39/78 (50%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
++H+D K N+L++ED ++ D G L ++ +++ E+ +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 190 EKSDVYSFGVFLLELVSG 207
+ SD+++ G + +LV+G
Sbjct: 213 KSSDLWALGCIIYQLVAG 230
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 39/78 (50%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
++H+D K N+L++ED ++ D G L ++ +++ E+ +
Sbjct: 154 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 213
Query: 190 EKSDVYSFGVFLLELVSG 207
+ SD+++ G + +LV+G
Sbjct: 214 KSSDLWALGCIIYQLVAG 231
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 79/212 (37%), Gaps = 27/212 (12%)
Query: 9 KNFSDKNLIGEGKFGEVYKGL-LQDGMLVAIKK--RP---GAPTQEFIDEVCFLASIQHR 62
K + IG G G V G+ VA+KK RP + E+ L + H+
Sbjct: 22 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHK 81
Query: 63 NLVTLLG-YCQENNLQ-----FLIYEYI-PNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
N+++LL + + L+ +L+ E + N IH+ E H
Sbjct: 82 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHM-----------ELDHERMSYLL 130
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
++H+D K +N++V D K+ D GL + P
Sbjct: 131 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTP---YVVTR 187
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A EV + E D++S G + ELV G
Sbjct: 188 YYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 39/78 (50%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
++H+D K N+L++ED ++ D G L ++ +++ E+ +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 190 EKSDVYSFGVFLLELVSG 207
+ SD+++ G + +LV+G
Sbjct: 213 KSSDLWALGCIIYQLVAG 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 39/78 (50%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
++H+D K N+L++ED ++ D G L ++ +++ E+ +
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 210
Query: 190 EKSDVYSFGVFLLELVSG 207
+ SD+++ G + +LV+G
Sbjct: 211 KSSDLWALGCIIYQLVAG 228
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 39/78 (50%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
++H+D K N+L++ED ++ D G L ++ +++ E+ +
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 210
Query: 190 EKSDVYSFGVFLLELVSG 207
+ SD+++ G + +LV+G
Sbjct: 211 KSSDLWALGCIIYQLVAG 228
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 39/78 (50%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
++H+D K N+L++ED ++ D G L ++ +++ E+ +
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSAC 210
Query: 190 EKSDVYSFGVFLLELVSG 207
+ SD+++ G + +LV+G
Sbjct: 211 KSSDLWALGCIIYQLVAG 228
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 39/78 (50%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
++H+D K N+L++ED ++ D G L ++ +++ E+ +
Sbjct: 156 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 215
Query: 190 EKSDVYSFGVFLLELVSG 207
+ SD+++ G + +LV+G
Sbjct: 216 KSSDLWALGCIIYQLVAG 233
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 81/209 (38%), Gaps = 19/209 (9%)
Query: 9 KNFSDKNLIGEGKFGEV---YKGLLQDGMLVAIKK--RP---GAPTQEFIDEVCFLASIQ 60
K + + IG G G V Y +L VAIKK RP + E+ + +
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 75
Query: 61 HRNLVTLLG-YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
H+N+++LL + + L E + + + L + ++E H
Sbjct: 76 HKNIISLLNVFTPQKTL-----EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQML 130
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
++H+D K +N++V D K+ D GL G + + P + A
Sbjct: 131 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP---YVVTRYYRA 187
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
EV + E D++S G + E+V +
Sbjct: 188 PEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 81/209 (38%), Gaps = 19/209 (9%)
Query: 9 KNFSDKNLIGEGKFGEV---YKGLLQDGMLVAIKK--RP---GAPTQEFIDEVCFLASIQ 60
K + + IG G G V Y +L VAIKK RP + E+ + +
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 74
Query: 61 HRNLVTLLG-YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
H+N+++LL + + L E + + + L + ++E H
Sbjct: 75 HKNIISLLNVFTPQKTL-----EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQML 129
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
++H+D K +N++V D K+ D GL G + + P + A
Sbjct: 130 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP---YVVTRYYRA 186
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
EV + E D++S G + E+V +
Sbjct: 187 PEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 39/78 (50%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
++H+D K N+L++ED ++ D G L ++ +++ E+ +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 190 EKSDVYSFGVFLLELVSG 207
+ SD+++ G + +LV+G
Sbjct: 213 KSSDLWALGCIIYQLVAG 230
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 39/78 (50%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
++H+D K N+L++ED ++ D G L ++ +++ E+ +
Sbjct: 135 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 194
Query: 190 EKSDVYSFGVFLLELVSG 207
+ SD+++ G + +LV+G
Sbjct: 195 KSSDLWALGCIIYQLVAG 212
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 39/78 (50%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
++H+D K N+L++ED ++ D G L ++ +++ E+ +
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 209
Query: 190 EKSDVYSFGVFLLELVSG 207
+ SD+++ G + +LV+G
Sbjct: 210 KSSDLWALGCIIYQLVAG 227
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 89/209 (42%), Gaps = 17/209 (8%)
Query: 6 LATKNFSDKNLIGEGKFGEVYK------GLLQDGMLVAIKKRPGAPTQEFIDEVCFLASI 59
L +F + +G G G V+K GL+ L+ ++ +P A + I E+ L
Sbjct: 65 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIRNQIIRELQVLHEC 123
Query: 60 QHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
+V G + + E++ GS+ L ++ Q L ++SI
Sbjct: 124 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQIL---GKVSIAVIKGLT 180
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
+++H+D K +N+LV+ K+ D G+ L + ++ +++
Sbjct: 181 YLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSYMS 233
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
E + +S +SD++S G+ L+E+ GR
Sbjct: 234 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 81/209 (38%), Gaps = 19/209 (9%)
Query: 9 KNFSDKNLIGEGKFGEV---YKGLLQDGMLVAIKK--RP---GAPTQEFIDEVCFLASIQ 60
K + + IG G G V Y +L VAIKK RP + E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 61 HRNLVTLLG-YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
H+N+++LL + + L E + + + L + ++E H
Sbjct: 82 HKNIISLLNVFTPQKTL-----EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQML 136
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
++H+D K +N++V D K+ D GL G + + P + A
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP---YVVTRYYRA 193
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
EV + E D++S G + E+V +
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 91/215 (42%), Gaps = 20/215 (9%)
Query: 4 LSLATKNFSDKNLIGEGKFGEVY-------KGLLQDGMLVAIKKRPGAPTQEFIDEVCFL 56
L + +++ +IG G FGEV + + +L + + + F +E +
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIM 129
Query: 57 ASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXX 116
A +V L Q++ +++ EY+P G + ++L V + +F +
Sbjct: 130 AFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDL-VNLMSNYDVPEKWAKFYTAEVVLALD 188
Query: 117 XXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI 176
++H+D K N+L+D+ K+AD G + T + + V +
Sbjct: 189 AIHSMG-------LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPD- 240
Query: 177 FLASEVKEFR----RFSEKSDVYSFGVFLLELVSG 207
+++ EV + + + + D +S GVFL E++ G
Sbjct: 241 YISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 77/208 (37%), Gaps = 35/208 (16%)
Query: 17 IGEGKFGEVYKGL------------LQDGMLVAIKKRPGAPTQEFIDEVCFLASIQHRNL 64
IG G F VYKGL LQD L ++ Q F +E L +QH N+
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSER------QRFKEEAEXLKGLQHPNI 87
Query: 65 VTLLGYCQE----NNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXXX 119
V + L+ E +G++ +L R K+ + K S
Sbjct: 88 VRFYDSWESTVKGKKCIVLVTELXTSGTLKTYL------KRFKVXKIKVLRSWCRQILKG 141
Query: 120 XXXXXXXXPRVVHKDFKTANVLVD-EDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFL 178
P ++H+D K N+ + K+ D GL L R A V F
Sbjct: 142 LQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT-LKRASFA---KAVIGTPEFX 197
Query: 179 ASEVKEFRRFSEKSDVYSFGVFLLELVS 206
A E E ++ E DVY+FG LE +
Sbjct: 198 APEXYE-EKYDESVDVYAFGXCXLEXAT 224
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 81/209 (38%), Gaps = 19/209 (9%)
Query: 9 KNFSDKNLIGEGKFGEV---YKGLLQDGMLVAIKK--RP---GAPTQEFIDEVCFLASIQ 60
K + + IG G G V Y +L VAIKK RP + E+ + +
Sbjct: 23 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 80
Query: 61 HRNLVTLLG-YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
H+N+++LL + + L E + + + L + ++E H
Sbjct: 81 HKNIISLLNVFTPQKTL-----EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQML 135
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
++H+D K +N++V D K+ D GL G + + P + A
Sbjct: 136 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP---YVVTRYYRA 192
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
EV + E D++S G + E+V +
Sbjct: 193 PEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 85/209 (40%), Gaps = 35/209 (16%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G+ VA+KK P Q I E+ L ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 89 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
++H+D K +N+ V+ED K+ GL TD + A + A
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILGFGLAR---HTD--DEMTGYVATRWYRAP 191
Query: 181 EVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 81/209 (38%), Gaps = 19/209 (9%)
Query: 9 KNFSDKNLIGEGKFGEV---YKGLLQDGMLVAIKK--RP---GAPTQEFIDEVCFLASIQ 60
K + + IG G G V Y +L VAIKK RP + E+ + +
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 75
Query: 61 HRNLVTLLG-YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
H+N+++LL + + L E + + + L + ++E H
Sbjct: 76 HKNIISLLNVFTPQKTL-----EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQML 130
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
++H+D K +N++V D K+ D GL G + + P + A
Sbjct: 131 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP---YVVTRYYRA 187
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
EV + E D++S G + E+V +
Sbjct: 188 PEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 39/78 (50%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
++H+D K N+L++ED ++ D G L ++ +++ E+ +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 190 EKSDVYSFGVFLLELVSG 207
+ SD+++ G + +LV+G
Sbjct: 213 KSSDLWALGCIIYQLVAG 230
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 81/209 (38%), Gaps = 19/209 (9%)
Query: 9 KNFSDKNLIGEGKFGEV---YKGLLQDGMLVAIKK--RP---GAPTQEFIDEVCFLASIQ 60
K + + IG G G V Y +L VAIKK RP + E+ + +
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 82
Query: 61 HRNLVTLLG-YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
H+N+++LL + + L E + + + L + ++E H
Sbjct: 83 HKNIISLLNVFTPQKTL-----EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQML 137
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
++H+D K +N++V D K+ D GL G + + P + A
Sbjct: 138 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP---YVVTRYYRA 194
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
EV + E D++S G + E+V +
Sbjct: 195 PEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 81/209 (38%), Gaps = 19/209 (9%)
Query: 9 KNFSDKNLIGEGKFGEV---YKGLLQDGMLVAIKK--RP---GAPTQEFIDEVCFLASIQ 60
K + + IG G G V Y +L VAIKK RP + E+ + +
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 82
Query: 61 HRNLVTLLG-YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
H+N+++LL + + L E + + + L + ++E H
Sbjct: 83 HKNIISLLNVFTPQKTL-----EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQML 137
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
++H+D K +N++V D K+ D GL G + + P + A
Sbjct: 138 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP---YVVTRYYRA 194
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
EV + E D++S G + E+V +
Sbjct: 195 PEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 81/209 (38%), Gaps = 19/209 (9%)
Query: 9 KNFSDKNLIGEGKFGEV---YKGLLQDGMLVAIKK--RP---GAPTQEFIDEVCFLASIQ 60
K + + IG G G V Y +L VAIKK RP + E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 61 HRNLVTLLG-YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
H+N+++LL + + L E + + + L + ++E H
Sbjct: 82 HKNIISLLNVFTPQKTL-----EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQML 136
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
++H+D K +N++V D K+ D GL G + + P + A
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP---YVVTRYYRA 193
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
EV + E D++S G + E+V +
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 63/153 (41%), Gaps = 16/153 (10%)
Query: 61 HRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXX 120
H N++ L + N FL+++ + G + +L +K+ + +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-------TEKVTLSEKETRKIMRALLE 135
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
+VH+D K N+L+D+D K+ D G F + D V +LA
Sbjct: 136 VICALHKLNIVHRDLKPENILLDDDMNIKLTDFG---FSCQLDPGEKLRSVCGTPSYLAP 192
Query: 181 EVKEFRR------FSEKSDVYSFGVFLLELVSG 207
E+ E + ++ D++S GV + L++G
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 88/214 (41%), Gaps = 21/214 (9%)
Query: 5 SLATKNFSDKNLIGEGKFGEVY-KGLLQDGMLVAIK--KRPGAPTQEFIDEV-----CFL 56
SL ++F +IG G + +V L + + A+K K+ E ID V F
Sbjct: 16 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE 75
Query: 57 ASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEF-KHRLSIXXX 115
+ H LV L Q + F + EY+ G + H+ ++ + F +S+
Sbjct: 76 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALN 135
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTAD 174
++++D K NVL+D + K+ D G+ + L D +S
Sbjct: 136 YLHERG--------IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---TSXFCGT 184
Query: 175 EIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
++A E+ + D ++ GV + E+++GR
Sbjct: 185 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 218
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 81/209 (38%), Gaps = 19/209 (9%)
Query: 9 KNFSDKNLIGEGKFGEV---YKGLLQDGMLVAIKK--RP---GAPTQEFIDEVCFLASIQ 60
K + + IG G G V Y +L VAIKK RP + E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVN 81
Query: 61 HRNLVTLLG-YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
H+N+++LL + + L E + + + L + ++E H
Sbjct: 82 HKNIISLLNVFTPQKTL-----EEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQML 136
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
++H+D K +N++V D K+ D GL G + + P + A
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTP---YVVTRYYRA 193
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
EV + E D++S G + E+V +
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 81/209 (38%), Gaps = 19/209 (9%)
Query: 9 KNFSDKNLIGEGKFGEV---YKGLLQDGMLVAIKK--RP---GAPTQEFIDEVCFLASIQ 60
K + + IG G G V Y +L VAIKK RP + E+ + +
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 119
Query: 61 HRNLVTLLG-YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
H+N+++LL + + L+ Y+ + L + ++E H
Sbjct: 120 HKNIISLLNVFTPQKTLEEFQDVYL-----VMELMDANLCQVIQMELDHERMSYLLYQML 174
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
++H+D K +N++V D K+ D GL G + + P + A
Sbjct: 175 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP---YVVTRYYRA 231
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
EV + E D++S G + E+V +
Sbjct: 232 PEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 88/214 (41%), Gaps = 21/214 (9%)
Query: 5 SLATKNFSDKNLIGEGKFGEVY-KGLLQDGMLVAIK--KRPGAPTQEFIDEV-----CFL 56
SL ++F +IG G + +V L + + A+K K+ E ID V F
Sbjct: 1 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE 60
Query: 57 ASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEF-KHRLSIXXX 115
+ H LV L Q + F + EY+ G + H+ ++ + F +S+
Sbjct: 61 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALN 120
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTAD 174
++++D K NVL+D + K+ D G+ + L D +S
Sbjct: 121 YLHERG--------IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---TSXFCGT 169
Query: 175 EIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
++A E+ + D ++ GV + E+++GR
Sbjct: 170 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 203
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 82/209 (39%), Gaps = 19/209 (9%)
Query: 9 KNFSDKNLIGEGKFGEV---YKGLLQDGMLVAIKK--RP---GAPTQEFIDEVCFLASIQ 60
K + + IG G G V Y +L VAIKK RP + E+ + +
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 74
Query: 61 HRNLVTLLG-YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
H+N+++LL + + L E + + + L + ++E H
Sbjct: 75 HKNIISLLNVFTPQKTL-----EEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQML 129
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
++H+D K +N++V D K+ D GL G + + P + A
Sbjct: 130 XGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTP---YVVTRYYRA 186
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
EV + E D++S G + E+V +
Sbjct: 187 PEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 39/78 (50%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
++H+D K N+L++ED ++ D G L ++ +++ E+ +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAX 212
Query: 190 EKSDVYSFGVFLLELVSG 207
+ SD+++ G + +LV+G
Sbjct: 213 KSSDLWALGCIIYQLVAG 230
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 82/209 (39%), Gaps = 19/209 (9%)
Query: 9 KNFSDKNLIGEGKFGEV---YKGLLQDGMLVAIKK--RP---GAPTQEFIDEVCFLASIQ 60
K + + IG G G V Y +L VAIKK RP + E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 61 HRNLVTLLG-YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
H+N+++LL + + L E + + + L + ++E H
Sbjct: 82 HKNIISLLNVFTPQKTL-----EEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQML 136
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
++H+D K +N++V D K+ D GL G + + P + A
Sbjct: 137 XGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTP---YVVTRYYRA 193
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
EV + E D++S G + E+V +
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEV-KEFRRF 188
++H+D K N+ V+ED K+ D GL + D VT + A EV + R+
Sbjct: 149 IIHRDLKPGNLAVNEDCELKILDFGLAR---QADSEMXGXVVT--RWYRAPEVILNWMRY 203
Query: 189 SEKSDVYSFGVFLLELVSGR 208
++ D++S G + E+++G+
Sbjct: 204 TQTVDIWSVGCIMAEMITGK 223
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
++H+D K +N++V D K+ D GL G + + P + A EV +
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP---YVVTRYYRAPEVILGMGYK 241
Query: 190 EKSDVYSFGVFLLELVSGR 208
E D++S G + E+V +
Sbjct: 242 ENVDIWSVGCIMGEMVRHK 260
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 12/85 (14%)
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRN---FLG--RTDVAGPSSQVTADEIFLASEVK 183
RV+H+D K N+ +++D K+ D GL F G + D+ G + ++A EV
Sbjct: 146 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPN-------YIAPEVL 198
Query: 184 EFRRFSEKSDVYSFGVFLLELVSGR 208
+ S + D++S G L L+ G+
Sbjct: 199 CKKGHSFEVDIWSLGCILYTLLVGK 223
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 68/159 (42%), Gaps = 14/159 (8%)
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
++E L ++ LV L ++N+ +++ EY P G + HL R+ F
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL-------RRIGRFXEP 141
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPS 168
+ ++++D K N+++D+ KV D G + GRT +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGT 201
Query: 169 SQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A EI L+ + +++ D ++ GV + E+ +G
Sbjct: 202 PEYLAPEIILS------KGYNKAVDWWALGVLIYEMAAG 234
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 82/209 (39%), Gaps = 19/209 (9%)
Query: 9 KNFSDKNLIGEGKFGEV---YKGLLQDGMLVAIKK--RP---GAPTQEFIDEVCFLASIQ 60
K + + IG G G V Y +L VAIKK RP + E+ + +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVN 81
Query: 61 HRNLVTLLG-YCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXX 119
H+N+++LL + + L E + + + L + ++E H
Sbjct: 82 HKNIISLLNVFTPQKTL-----EEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQML 136
Query: 120 XXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
++H+D K +N++V D K+ D GL G + + P + A
Sbjct: 137 XGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTP---YVVTRYYRA 193
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
EV + E D++S G + E+V +
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 12/85 (14%)
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRN---FLG--RTDVAGPSSQVTADEIFLASEVK 183
RV+H+D K N+ +++D K+ D GL F G + D+ G + ++A EV
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPN-------YIAPEVL 214
Query: 184 EFRRFSEKSDVYSFGVFLLELVSGR 208
+ S + D++S G L L+ G+
Sbjct: 215 CKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 119/297 (40%), Gaps = 55/297 (18%)
Query: 8 TKNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIK--KRPGAPT---QEFIDEVCFLASI-Q 60
T F + IG G+FG V+K + + DG + AIK K+P A + Q + EV A + Q
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 61 HRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXX 120
H ++V E++ + EY GS++ + S+ R FK
Sbjct: 70 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI---SENYRIMSYFKEAELKDLLLQVGR 126
Query: 121 XXXXXXXPRVVHKDFKTANVLV-------------DEDFIA------KVADAGLRNFLGR 161
+VH D K +N+ + DED A K+ D G
Sbjct: 127 GLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLG-----HV 181
Query: 162 TDVAGPSSQVTADEIFLASEV-KEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXX 220
T ++ P + D FLA+EV +E K+D+++ + ++ +G E
Sbjct: 182 TRISSPQVE-EGDSRFLANEVLQENYTHLPKADIFALALTVV-CAAGAEP---------- 229
Query: 221 XXVELVQNSRDFSNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
L +N + + + R+ + +EF +L+ + P ERRPS +V
Sbjct: 230 ----LPRNGDQWHEIRQGRLPRIPQVLS----QEFTELLKVMIHPDPERRPSAMALV 278
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 82/215 (38%), Gaps = 44/215 (20%)
Query: 14 KNLIGEGKFGEVYKGLLQDG---MLVAIK----KRPGAPTQEFIDEVCFLASIQHRNLVT 66
++++G G F EV L +D LVAIK K +E+ L I+H N+V
Sbjct: 23 RDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 67 LLGYCQENNLQFLIYEYIPNGS-----VSIHLYGPSQVSR------QKLEFKHRLSIXXX 115
L + +LI + + G V Y SR +++ H L I
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI--- 137
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVL---VDEDFIAKVADAGLRNFLGRTDVAGPSSQVT 172
VH+D K N+L +DED ++D GL D S
Sbjct: 138 ---------------VHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTAC 179
Query: 173 ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
++A EV + +S+ D +S GV L+ G
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 84/204 (41%), Gaps = 18/204 (8%)
Query: 5 SLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASIQHRNL 64
+L T +F L+ + G Y + D V K+ + ++E L ++ L
Sbjct: 35 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQ----IEHTLNEKRILQAVNFPFL 90
Query: 65 VTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXX 124
V L ++N+ +++ EY+ G + HL + S F +
Sbjct: 91 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD-- 148
Query: 125 XXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEVK 183
++++D K N+L+DE +V D G + GRT + + A EI L+
Sbjct: 149 -----LIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS---- 199
Query: 184 EFRRFSEKSDVYSFGVFLLELVSG 207
+ +++ D ++ GV + E+ +G
Sbjct: 200 --KGYNKAVDWWALGVLIYEMAAG 221
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 119/297 (40%), Gaps = 55/297 (18%)
Query: 8 TKNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIK--KRPGAPT---QEFIDEVCFLASI-Q 60
T F + IG G+FG V+K + + DG + AIK K+P A + Q + EV A + Q
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 61 HRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXX 120
H ++V E++ + EY GS++ + S+ R FK
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI---SENYRIMSYFKEAELKDLLLQVGR 124
Query: 121 XXXXXXXPRVVHKDFKTANVLV-------------DEDFIA------KVADAGLRNFLGR 161
+VH D K +N+ + DED A K+ D G
Sbjct: 125 GLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLG-----HV 179
Query: 162 TDVAGPSSQVTADEIFLASEV-KEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXX 220
T ++ P + D FLA+EV +E K+D+++ + ++ +G E
Sbjct: 180 TRISSPQVE-EGDSRFLANEVLQENYTHLPKADIFALALTVV-CAAGAEP---------- 227
Query: 221 XXVELVQNSRDFSNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
L +N + + + R+ + +EF +L+ + P ERRPS +V
Sbjct: 228 ----LPRNGDQWHEIRQGRLPRIPQVLS----QEFTELLKVMIHPDPERRPSAMALV 276
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 68/159 (42%), Gaps = 14/159 (8%)
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
++E L ++ LV L ++N+ +++ EY P G + HL + S F
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPS 168
+ ++++D K N+++D+ +V D G + GRT +
Sbjct: 149 QIVLTFEYLHSLD-------LIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 169 SQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A EI L+ + +++ D ++ GV + E+ +G
Sbjct: 202 PEYLAPEIILS------KGYNKAVDWWALGVLIYEMAAG 234
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFS 189
++++D K N+L+DE+ K+ D GL D + ++A EV + S
Sbjct: 151 IIYRDLKPENILLDEEGHIKLTDFGLSK--EAIDHEKKAYSFCGTVEYMAPEVVNRQGHS 208
Query: 190 EKSDVYSFGVFLLELVSG 207
+D +S+GV + E+++G
Sbjct: 209 HSADWWSYGVLMFEMLTG 226
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 119/297 (40%), Gaps = 55/297 (18%)
Query: 8 TKNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIK--KRPGAPT---QEFIDEVCFLASI-Q 60
T F + IG G+FG V+K + + DG + AIK K+P A + Q + EV A + Q
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 61 HRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXX 120
H ++V E++ + EY GS++ + S+ R FK
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI---SENYRIMSYFKEAELKDLLLQVGR 124
Query: 121 XXXXXXXPRVVHKDFKTANVLV-------------DEDFIA------KVADAGLRNFLGR 161
+VH D K +N+ + DED A K+ D G
Sbjct: 125 GLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLG-----HV 179
Query: 162 TDVAGPSSQVTADEIFLASEV-KEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXX 220
T ++ P + D FLA+EV +E K+D+++ + ++ +G E
Sbjct: 180 TRISSPQVE-EGDSRFLANEVLQENYTHLPKADIFALALTVV-CAAGAEP---------- 227
Query: 221 XXVELVQNSRDFSNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
L +N + + + R+ + +EF +L+ + P ERRPS +V
Sbjct: 228 ----LPRNGDQWHEIRQGRLPRIPQVLS----QEFTELLKVMIHPDPERRPSAMALV 276
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 87/207 (42%), Gaps = 15/207 (7%)
Query: 11 FSDKNLIGEGKFGEV---YKGLLQDGMLVAIKKRPGAPTQEF----IDEVCFLASIQHRN 63
+++ + IGEG +G V Y L + + VAIKK Q + + E+ L +H N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXX 123
++ + + ++ + YI + LY + Q L H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY--KLLKTQHLSNDHICYFLYQILRGLKYI 144
Query: 124 XXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEV 182
V+H+D K +N+L++ K+ D GL R D G ++ A + A E+
Sbjct: 145 HSA--NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 183 K-EFRRFSEKSDVYSFGVFLLELVSGR 208
+ +++ D++S G L E++S R
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 87/207 (42%), Gaps = 15/207 (7%)
Query: 11 FSDKNLIGEGKFGEV---YKGLLQDGMLVAIKKRPGAPTQEF----IDEVCFLASIQHRN 63
+++ + IGEG +G V Y L + + VAIKK Q + + E+ L +H N
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 80
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXX 123
++ + + ++ + YI + LY + Q L H
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY--KLLKTQHLSNDHICYFLYQILRGLKYI 138
Query: 124 XXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEV 182
V+H+D K +N+L++ K+ D GL R D G ++ A + A E+
Sbjct: 139 HSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 196
Query: 183 K-EFRRFSEKSDVYSFGVFLLELVSGR 208
+ +++ D++S G L E++S R
Sbjct: 197 MLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 67/159 (42%), Gaps = 14/159 (8%)
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
++E L ++ L L ++N+ +++ EY P G + HL + S F
Sbjct: 90 LNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPS 168
+ ++++D K N+++D+ KV D G + GRT +
Sbjct: 150 QIVLTFEYLHSLD-------LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGT 202
Query: 169 SQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A EI L+ + +++ D ++ GV + E+ +G
Sbjct: 203 PEYLAPEIILS------KGYNKAVDWWALGVLIYEMAAG 235
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 119/297 (40%), Gaps = 55/297 (18%)
Query: 8 TKNFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIK--KRPGAPT---QEFIDEVCFLASI-Q 60
T F + IG G+FG V+K + + DG + AIK K+P A + Q + EV A + Q
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 65
Query: 61 HRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXX 120
H ++V E++ + EY GS++ + S+ R FK
Sbjct: 66 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI---SENYRIMSYFKEAELKDLLLQVGR 122
Query: 121 XXXXXXXPRVVHKDFKTANVLV-------------DEDFIA------KVADAGLRNFLGR 161
+VH D K +N+ + DED A K+ D G
Sbjct: 123 GLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLG-----HV 177
Query: 162 TDVAGPSSQVTADEIFLASEV-KEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXX 220
T ++ P + D FLA+EV +E K+D+++ + ++ +G E
Sbjct: 178 TRISSPQVE-EGDSRFLANEVLQENYTHLPKADIFALALTVV-XAAGAEP---------- 225
Query: 221 XXVELVQNSRDFSNLLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
L +N + + + R+ + +EF +L+ + P ERRPS +V
Sbjct: 226 ----LPRNGDQWHEIRQGRLPRIPQVLS----QEFTELLKVMIHPDPERRPSAMALV 274
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 93/215 (43%), Gaps = 31/215 (14%)
Query: 14 KNLIGEGKFGEVYKGL----LQDGMLVAIKKRPGAPTQEFIDEVCFLASIQ-HRNLVTLL 68
++++GEG V + Q+ + I+K+PG EV L Q HRN++ L+
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 69 GYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
+ +E + +L++E + GS+ H++ ++ F +
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIH-------KRRHFNELEASVVVQDVASALDFLHNK 130
Query: 129 RVVHKDFKTANVLVDED---FIAKVADAGLRNFLGRTDVAGPSSQVTADEI--------F 177
+ H+D K N+L + K+ D GL + + + G S ++ E+ +
Sbjct: 131 GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGI---KLNGDCSPISTPELLTPCGSAEY 187
Query: 178 LASEV-----KEFRRFSEKSDVYSFGVFLLELVSG 207
+A EV +E + ++ D++S GV L L+SG
Sbjct: 188 MAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 86/205 (41%), Gaps = 11/205 (5%)
Query: 11 FSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKKRPGAPTQEF----IDEVCFLASIQHRNLV 65
+++ + IGEG +G V + + VAIKK Q + + E+ L + +H N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 66 TLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
+ + ++ + YI + LY + Q L H
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLY--KLLKTQHLSNDHICYFLYQILRGLKYIHS 144
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEVK- 183
V+H+D K +N+L++ K+ D GL R D G ++ A + A E+
Sbjct: 145 A--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 184 EFRRFSEKSDVYSFGVFLLELVSGR 208
+ +++ D++S G L E++S R
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 87/215 (40%), Gaps = 50/215 (23%)
Query: 17 IGEGKFGEVYKGLLQDGM-LVAIKK------RPGAPTQEFIDEVCFLASIQHRNLVTLLG 69
IGEG +G V+K ++ +VA+K+ G P+ + E+C L ++H+N+V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSA-LREICLLKELKHKNIVRLHD 68
Query: 70 YCQENNLQFLIYEYIP----------NGSVSIHLYGPSQVSRQK-LEFKHRLSIXXXXXX 118
+ L++E+ NG + + K L F H +
Sbjct: 69 VLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN------- 121
Query: 119 XXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT------ 172
V+H+D K N+L++ + K+AD GL G V S++V
Sbjct: 122 -----------VLHRDLKPQNLLINRNGELKLADFGLARAFG-IPVRCYSAEVVTLWYRP 169
Query: 173 ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
D +F A + +S D++S G EL +
Sbjct: 170 PDVLFGA------KLYSTSIDMWSAGCIFAELANA 198
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 67/159 (42%), Gaps = 14/159 (8%)
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
++E L ++ L L ++N+ +++ EY P G + HL + S F
Sbjct: 90 LNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPS 168
+ ++++D K N+++D+ KV D G + GRT +
Sbjct: 150 QIVLTFEYLHSLD-------LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGT 202
Query: 169 SQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A EI L+ + +++ D ++ GV + E+ +G
Sbjct: 203 PEYLAPEIILS------KGYNKAVDWWALGVLIYEMAAG 235
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 87/207 (42%), Gaps = 15/207 (7%)
Query: 11 FSDKNLIGEGKFGEV---YKGLLQDGMLVAIKKRPGAPTQEF----IDEVCFLASIQHRN 63
+++ + IGEG +G V Y L + + VAIKK Q + + E+ L +H N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHEN 86
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXX 123
++ + + ++ + YI + LY + Q L H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY--KLLKTQHLSNDHICYFLYQILRGLKYI 144
Query: 124 XXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEV 182
V+H+D K +N+L++ K+ D GL R D G ++ A + A E+
Sbjct: 145 HSA--NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 183 K-EFRRFSEKSDVYSFGVFLLELVSGR 208
+ +++ D++S G L E++S R
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 87/207 (42%), Gaps = 15/207 (7%)
Query: 11 FSDKNLIGEGKFGEV---YKGLLQDGMLVAIKKRPGAPTQEF----IDEVCFLASIQHRN 63
+++ + IGEG +G V Y L + + VAIKK Q + + E+ L +H N
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 87
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXX 123
++ + + ++ + YI + LY + Q L H
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY--KLLKTQHLSNDHICYFLYQILRGLKYI 145
Query: 124 XXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEV 182
V+H+D K +N+L++ K+ D GL R D G ++ A + A E+
Sbjct: 146 HSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 203
Query: 183 K-EFRRFSEKSDVYSFGVFLLELVSGR 208
+ +++ D++S G L E++S R
Sbjct: 204 MLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 87/207 (42%), Gaps = 15/207 (7%)
Query: 11 FSDKNLIGEGKFGEV---YKGLLQDGMLVAIKKRPGAPTQEF----IDEVCFLASIQHRN 63
+++ + IGEG +G V Y L + + VAIKK Q + + E+ L +H N
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 80
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXX 123
++ + + ++ + YI + LY + Q L H
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY--KLLKTQHLSNDHICYFLYQILRGLKYI 138
Query: 124 XXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEV 182
V+H+D K +N+L++ K+ D GL R D G ++ A + A E+
Sbjct: 139 HSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 196
Query: 183 K-EFRRFSEKSDVYSFGVFLLELVSGR 208
+ +++ D++S G L E++S R
Sbjct: 197 MLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 87/207 (42%), Gaps = 15/207 (7%)
Query: 11 FSDKNLIGEGKFGEV---YKGLLQDGMLVAIKKRPGAPTQEF----IDEVCFLASIQHRN 63
+++ + IGEG +G V Y L + + VAIKK Q + + E+ L +H N
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 88
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXX 123
++ + + ++ + YI + LY + Q L H
Sbjct: 89 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY--KLLKTQHLSNDHICYFLYQILRGLKYI 146
Query: 124 XXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEV 182
V+H+D K +N+L++ K+ D GL R D G ++ A + A E+
Sbjct: 147 HSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 204
Query: 183 K-EFRRFSEKSDVYSFGVFLLELVSGR 208
+ +++ D++S G L E++S R
Sbjct: 205 MLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 87/207 (42%), Gaps = 15/207 (7%)
Query: 11 FSDKNLIGEGKFGEV---YKGLLQDGMLVAIKKRPGAPTQEF----IDEVCFLASIQHRN 63
+++ + IGEG +G V Y L + + VAIKK Q + + E+ L +H N
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 79
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXX 123
++ + + ++ + YI + LY + Q L H
Sbjct: 80 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY--KLLKTQHLSNDHICYFLYQILRGLKYI 137
Query: 124 XXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEV 182
V+H+D K +N+L++ K+ D GL R D G ++ A + A E+
Sbjct: 138 HSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 195
Query: 183 K-EFRRFSEKSDVYSFGVFLLELVSGR 208
+ +++ D++S G L E++S R
Sbjct: 196 MLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 87/207 (42%), Gaps = 15/207 (7%)
Query: 11 FSDKNLIGEGKFGEV---YKGLLQDGMLVAIKKRPGAPTQEF----IDEVCFLASIQHRN 63
+++ + IGEG +G V Y L + + VAIKK Q + + E+ L +H N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXX 123
++ + + ++ + YI + LY + Q L H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY--KLLKTQHLSNDHICYFLYQILRGLKYI 144
Query: 124 XXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEV 182
V+H+D K +N+L++ K+ D GL R D G ++ A + A E+
Sbjct: 145 HSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 183 K-EFRRFSEKSDVYSFGVFLLELVSGR 208
+ +++ D++S G L E++S R
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 86/214 (40%), Gaps = 21/214 (9%)
Query: 5 SLATKNFSDKNLIGEGKFGEVYKGLLQDG---MLVAIKKRPGAPTQEFIDEV-----CFL 56
SL ++F +IG G + +V L+ + + K+ E ID V F
Sbjct: 48 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFE 107
Query: 57 ASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEF-KHRLSIXXX 115
+ H LV L Q + F + EY+ G + H+ ++ + F +S+
Sbjct: 108 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALN 167
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTAD 174
++++D K NVL+D + K+ D G+ + L D +S
Sbjct: 168 YLHERG--------IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---TSTFCGT 216
Query: 175 EIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
++A E+ + D ++ GV + E+++GR
Sbjct: 217 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 250
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/287 (18%), Positives = 110/287 (38%), Gaps = 53/287 (18%)
Query: 17 IGEGKFGEVYKGLLQDG-----------MLVAIKKRPGAPTQEFIDEVCFLASIQHRNLV 65
+G+G F +++KG+ ++ +L + K ++ F + ++ + H++LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 66 TLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSR--QKLEFKHRLSIXXXXXXXXXXX 123
G C + L+ E++ GS+ +L KLE +L+
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENT-- 133
Query: 124 XXXXPRVVHKDFKTANVLV--DED-------FIAKVADAGLRNFLGRTDVAGPSSQVTAD 174
++H + N+L+ +ED FI K++D G+ + D+
Sbjct: 134 ------LIHGNVCAKNILLIREEDRKTGNPPFI-KLSDPGISITVLPKDILQERIPWVPP 186
Query: 175 EIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSN 234
E ++ + + +D +SFG L E+ SG + ++ D
Sbjct: 187 EC-----IENPKNLNLATDKWSFGTTLWEICSGGDKPL---------------SALDSQR 226
Query: 235 LLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELD 281
L+ ++R E LI C+D + RPS ++ +L+
Sbjct: 227 KLQFYEDR--HQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLN 271
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 81/215 (37%), Gaps = 22/215 (10%)
Query: 4 LSLATKNFSDKNLIGEGKFGEVYKGLLQD-GMLVAIK-------KRPGAPTQEFIDEVCF 55
+ L +FS +IG G FGEVY D G + A+K K T + +
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 242
Query: 56 -LASIQHRNLVTLLGYC--QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSI 112
L S + + Y + L F++ + + G + HL S + F I
Sbjct: 243 SLVSTGDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAEII 301
Query: 113 XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT 172
VV++D K AN+L+DE +++D GL + P + V
Sbjct: 302 LGLEHMHNRF-------VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---PHASVG 351
Query: 173 ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+++ + +D +S G L +L+ G
Sbjct: 352 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 113/278 (40%), Gaps = 41/278 (14%)
Query: 14 KNLIGEGKFGEVY-----KGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASIQHRNLVTLL 68
K +G G FG+V+ L+ + K R P ++ E+ L S+ H N++ +
Sbjct: 27 KRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIF 86
Query: 69 GYCQENNLQFLIYEYIPNGS-----VSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXX 123
++ + +++ E G VS G + E ++
Sbjct: 87 EVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQM--------MNALA 138
Query: 124 XXXXPRVVHKDFKTANVLVDE---DFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLAS 180
VVHKD K N+L + K+ D GL L ++D ++ TA +++A
Sbjct: 139 YFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAE-LFKSDEHSTNAAGTA--LYMAP 195
Query: 181 EVKEFRR-FSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKIL 239
EV F+R + K D++S GV + L++G +E VQ + +
Sbjct: 196 EV--FKRDVTFKCDIWSAGVVMYFLLTG-------CLPFTGTSLEEVQQKATYKEPNYAV 246
Query: 240 DERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
+ R T + ++ Q++ + DP ERRPS + V+
Sbjct: 247 ECR---PLTPQAVDLLKQMLTK--DP--ERRPSAAQVL 277
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 68/159 (42%), Gaps = 14/159 (8%)
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
++E L ++ LV L ++N+ +++ EY+ G + HL + S F
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPS 168
+ ++++D K N+L+D+ +V D G + GRT +
Sbjct: 149 QIVLTFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGT 201
Query: 169 SQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A EI L+ + +++ D ++ GV + E+ +G
Sbjct: 202 PEYLAPEIILS------KGYNKAVDWWALGVLIYEMAAG 234
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 81/215 (37%), Gaps = 22/215 (10%)
Query: 4 LSLATKNFSDKNLIGEGKFGEVYKGLLQD-GMLVAIK-------KRPGAPTQEFIDEVCF 55
+ L +FS +IG G FGEVY D G + A+K K T + +
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 56 -LASIQHRNLVTLLGYC--QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSI 112
L S + + Y + L F++ + + G + HL S + F I
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAEII 302
Query: 113 XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT 172
VV++D K AN+L+DE +++D GL + P + V
Sbjct: 303 LGLEHMHNRF-------VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---PHASVG 352
Query: 173 ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+++ + +D +S G L +L+ G
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 81/215 (37%), Gaps = 22/215 (10%)
Query: 4 LSLATKNFSDKNLIGEGKFGEVYKGLLQD-GMLVAIK-------KRPGAPTQEFIDEVCF 55
+ L +FS +IG G FGEVY D G + A+K K T + +
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 56 -LASIQHRNLVTLLGYC--QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSI 112
L S + + Y + L F++ + + G + HL S + F I
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAEII 302
Query: 113 XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT 172
VV++D K AN+L+DE +++D GL + P + V
Sbjct: 303 LGLEHMHNRF-------VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---PHASVG 352
Query: 173 ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+++ + +D +S G L +L+ G
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 81/215 (37%), Gaps = 22/215 (10%)
Query: 4 LSLATKNFSDKNLIGEGKFGEVYKGLLQD-GMLVAIK-------KRPGAPTQEFIDEVCF 55
+ L +FS +IG G FGEVY D G + A+K K T + +
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 56 -LASIQHRNLVTLLGYC--QENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSI 112
L S + + Y + L F++ + + G + HL S + F I
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAEII 302
Query: 113 XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT 172
VV++D K AN+L+DE +++D GL + P + V
Sbjct: 303 LGLEHMHNRF-------VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---PHASVG 352
Query: 173 ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+++ + +D +S G L +L+ G
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 28/216 (12%)
Query: 2 EELSLATKNFSDKNLIGEGKFGEVYKGLLQD---GMLVAIKKRPGAPTQEF-IDEVCFLA 57
EE+ AT +G G FGEV++ ++D G A+KK + F +E+ A
Sbjct: 90 EEVHWATHQLR----LGRGSFGEVHR--MEDKQTGFQCAVKK---VRLEVFRAEELMACA 140
Query: 58 SIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXX 117
+ +V L G +E + E + GS+ Q+ +++ ++
Sbjct: 141 GLTSPRIVPLYGAVREGPWVNIFMELLEGGSLG-------QLVKEQGCLPEDRALYYLGQ 193
Query: 118 XXXXXXXXXXPRVVHKDFKTANVLVDEDFI-AKVADAG-----LRNFLGRTDVAGPSSQV 171
R++H D K NVL+ D A + D G + LG++ + G +
Sbjct: 194 ALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTG--DYI 251
Query: 172 TADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
E +A EV R K DV+S +L +++G
Sbjct: 252 PGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 86/210 (40%), Gaps = 37/210 (17%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEFID------EVCFLASIQHRNLVTLLG 69
+G G +G V + G VA+KK P Q I E+ L ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 70 Y------CQENNLQFLIYEYIPNGSVSIHLYGP---SQVSRQKLEFKHRLSIXXXXXXXX 120
+E N +L+ HL G + V QKL H +
Sbjct: 89 VFTPARSLEEFNDVYLV----------THLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGR-TDVAGPSSQVTADEIFLA 179
++H+D K +N+ V+ED K+ D +L R TD + A + A
Sbjct: 139 KYIHSAD--IIHRDLKPSNLAVNEDCELKILDF----YLARHTD--DEMTGYVATRWYRA 190
Query: 180 SEVK-EFRRFSEKSDVYSFGVFLLELVSGR 208
E+ + +++ D++S G + EL++GR
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/287 (18%), Positives = 110/287 (38%), Gaps = 53/287 (18%)
Query: 17 IGEGKFGEVYKGLLQDG-----------MLVAIKKRPGAPTQEFIDEVCFLASIQHRNLV 65
+G+G F +++KG+ ++ +L + K ++ F + ++ + H++LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 66 TLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSR--QKLEFKHRLSIXXXXXXXXXXX 123
G C + L+ E++ GS+ +L KLE +L+
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWAMHFLEENT-- 133
Query: 124 XXXXPRVVHKDFKTANVLV--DED-------FIAKVADAGLRNFLGRTDVAGPSSQVTAD 174
++H + N+L+ +ED FI K++D G+ + D+
Sbjct: 134 ------LIHGNVCAKNILLIREEDRKTGNPPFI-KLSDPGISITVLPKDILQERIPWVPP 186
Query: 175 EIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSN 234
E ++ + + +D +SFG L E+ SG + ++ D
Sbjct: 187 EC-----IENPKNLNLATDKWSFGTTLWEICSGGDKPL---------------SALDSQR 226
Query: 235 LLKILDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVVTELD 281
L+ ++R E LI C+D + RPS ++ +L+
Sbjct: 227 KLQFYEDR--HQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLN 271
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 95/221 (42%), Gaps = 23/221 (10%)
Query: 1 MEELSLATKNFSDKNLIGEGKFGEVYKGLLQDG-MLVAIK--------KRPGAPTQEFID 51
++++ L ++F +IG G FGEV L++ + A+K KR A T F +
Sbjct: 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKR--AETACFRE 123
Query: 52 EVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLS 111
E L + + + TL Q++N +L+ +Y G + L S+ + ++
Sbjct: 124 ERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLL------SKFEDRLPEEMA 177
Query: 112 IXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAG-----LRNFLGRTDVAG 166
VH+D K N+L+D + ++AD G + + ++ VA
Sbjct: 178 RFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAV 237
Query: 167 PSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ + EI A E + R+ + D +S GV + E++ G
Sbjct: 238 GTPDYISPEILQAMEGGK-GRYGPECDWWSLGVCMYEMLYG 277
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 66/159 (41%), Gaps = 30/159 (18%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTD-----------VAGPSSQVTADEIFL 178
++H+D K +N+ D + KV D GL + + + A QV ++++
Sbjct: 185 LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQV-GTKLYM 243
Query: 179 ASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKI 238
+ E +S K D++S G+ L EL+ +E V+ D NL
Sbjct: 244 SPEQIHGNNYSHKVDIFSLGLILFELLYS-----------FSTQMERVRIITDVRNLKFP 292
Query: 239 LDERLWSTFTNEGMEEFIQLIVRCLDPSSERRPSMSDVV 277
L FT + +E + ++ L PS RP +D++
Sbjct: 293 L------LFTQKYPQEHM-MVQDMLSPSPTERPEATDII 324
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 86/205 (41%), Gaps = 11/205 (5%)
Query: 11 FSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKKRPGAPTQEF----IDEVCFLASIQHRNLV 65
+++ + IGEG +G V + + VAIKK Q + + E+ L + +H N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 66 TLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
+ + ++ + YI + LY + Q L H
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLY--KLLKTQHLSNDHICYFLYQILRGLKYIHS 144
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEVK- 183
V+H+D K +N+L++ K+ D GL R D G ++ A + A E+
Sbjct: 145 A--NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 184 EFRRFSEKSDVYSFGVFLLELVSGR 208
+ +++ D++S G L E++S R
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 81/199 (40%), Gaps = 20/199 (10%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEF-IDEVCFLASIQHRNLVTLLGYCQEN 74
+G G FGEV++ Q G A+KK + F ++E+ A + +V L G +E
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKK---VRLEVFRVEELVACAGLSSPRIVPLYGAVREG 122
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKD 134
+ E + GS+ Q+ +Q ++ R++H D
Sbjct: 123 PWVNIFMELLEGGSLG-------QLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGD 175
Query: 135 FKTANVLVDEDFI-AKVADAGLR-----NFLGRTDVAGPSSQVTADEIFLASEVKEFRRF 188
K NVL+ D A + D G + LG++ + G + E +A EV +
Sbjct: 176 VKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTG--DYIPGTETHMAPEVVMGKPC 233
Query: 189 SEKSDVYSFGVFLLELVSG 207
K D++S +L +++G
Sbjct: 234 DAKVDIWSSCCMMLHMLNG 252
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 87/207 (42%), Gaps = 15/207 (7%)
Query: 11 FSDKNLIGEGKFGEV---YKGLLQDGMLVAIKKRPGAPTQEF----IDEVCFLASIQHRN 63
+++ + IGEG +G V Y L + + VAIKK Q + + E+ L +H N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXX 123
++ + + ++ + YI + LY + Q L H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY--KLLKCQHLSNDHICYFLYQILRGLKYI 144
Query: 124 XXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEV 182
V+H+D K +N+L++ K+ D GL R D G ++ A + A E+
Sbjct: 145 HSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 183 K-EFRRFSEKSDVYSFGVFLLELVSGR 208
+ +++ D++S G L E++S R
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 84/208 (40%), Gaps = 20/208 (9%)
Query: 8 TKNFSDKNLIGEGKFGE----VYKGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASIQHRN 63
T + K IG G + ++K + + I K PT+E E+ L QH N
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEI--EI-LLRYGQHPN 77
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXX 123
++TL + +++ E G + ++ RQK F R +
Sbjct: 78 IITLKDVYDDGKYVYVVTELXKGGELL------DKILRQKF-FSEREASAVLFTITKTVE 130
Query: 124 XXXXPRVVHKDFKTANVL-VDEDFIA---KVADAGLRNFLGRTDVAGPSSQVTADEIFLA 179
VVH+D K +N+L VDE ++ D G L + + TA+ F+A
Sbjct: 131 YLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTAN--FVA 188
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSG 207
EV E + + D++S GV L ++G
Sbjct: 189 PEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 84/215 (39%), Gaps = 44/215 (20%)
Query: 14 KNLIGEGKFGEVYKGLLQDG---MLVAIK--KRPGAPTQE--FIDEVCFLASIQHRNLVT 66
++++G G F EV L +D LVAIK + +E +E+ L I+H N+V
Sbjct: 23 RDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 67 LLGYCQENNLQFLIYEYIPNGS-----VSIHLYGPSQVSR------QKLEFKHRLSIXXX 115
L + +LI + + G V Y SR +++ H L I
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI--- 137
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVL---VDEDFIAKVADAGLRNFLGRTDVAGPSSQVT 172
VH+D K N+L +DED ++D GL D S
Sbjct: 138 ---------------VHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTAC 179
Query: 173 ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
++A EV + +S+ D +S GV L+ G
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQ-VTADEIFLASEVKEFRRF 188
V+H+D K+ ++L+ D K++D G F + P + + ++A EV +
Sbjct: 162 VIHRDIKSDSILLTSDGRIKLSDFG---FCAQVSKEVPKRKXLVGTPYWMAPEVISRLPY 218
Query: 189 SEKSDVYSFGVFLLELVSG 207
+ D++S G+ ++E++ G
Sbjct: 219 GTEVDIWSLGIMVIEMIDG 237
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQ-VTADEIFLASEVKEFRR 187
RV+H+D K N+ +++D K+ D GL + + G + + ++A EV +
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLAT---KIEFDGERKKXLCGTPNYIAPEVLCKKG 218
Query: 188 FSEKSDVYSFGVFLLELVSGR 208
S + D++S G L L+ G+
Sbjct: 219 HSFEVDIWSLGCILYTLLVGK 239
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 64/150 (42%), Gaps = 19/150 (12%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFL---GRTDVAGPSSQVTADEIFLASEVKEFR 186
V+H+D K +NVL++ K D G+ +L D+ A E + E+ + +
Sbjct: 158 VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPE-RINPELNQ-K 215
Query: 187 RFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQNSRDFSNLLKILDERLWST 246
+S KSD++S G+ +EL R F L ++++E
Sbjct: 216 GYSVKSDIWSLGITXIELAILRFPYDSW--------------GTPFQQLKQVVEEPSPQL 261
Query: 247 FTNEGMEEFIQLIVRCLDPSSERRPSMSDV 276
++ EF+ +CL +S+ RP+ ++
Sbjct: 262 PADKFSAEFVDFTSQCLKKNSKERPTYPEL 291
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 11/205 (5%)
Query: 11 FSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKKRPGAPTQEF----IDEVCFLASIQHRNLV 65
+++ + IGEG +G V + + VAIKK Q + + E+ L +H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 66 TLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
+ + ++ + YI + LY + Q L H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLY--KLLKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEVK- 183
V+H+D K +N+L++ K+ D GL R D G ++ A + A E+
Sbjct: 143 A--NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 184 EFRRFSEKSDVYSFGVFLLELVSGR 208
+ +++ D++S G L E++S R
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 11/205 (5%)
Query: 11 FSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKKRPGAPTQEF----IDEVCFLASIQHRNLV 65
+++ + IGEG +G V + + VAIKK Q + + E+ L +H N++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 66 TLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
+ + ++ + YI + LY + Q L H
Sbjct: 105 GINDIIRAPTIEQMKDVYIVQDLMETDLY--KLLKTQHLSNDHICYFLYQILRGLKYIHS 162
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEVK- 183
V+H+D K +N+L++ K+ D GL R D G ++ A + A E+
Sbjct: 163 A--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 184 EFRRFSEKSDVYSFGVFLLELVSGR 208
+ +++ D++S G L E++S R
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 11/205 (5%)
Query: 11 FSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKKRPGAPTQEF----IDEVCFLASIQHRNLV 65
+++ + IGEG +G V + + VAIKK Q + + E+ L +H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 66 TLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
+ + ++ + YI + LY + Q L H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLY--KLLKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEVK- 183
V+H+D K +N+L++ K+ D GL R D G ++ A + A E+
Sbjct: 143 A--NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 184 EFRRFSEKSDVYSFGVFLLELVSGR 208
+ +++ D++S G L E++S R
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 11/205 (5%)
Query: 11 FSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKKRPGAPTQEF----IDEVCFLASIQHRNLV 65
+++ + IGEG +G V + + VAIKK Q + + E+ L +H N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 86
Query: 66 TLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
+ + ++ + YI + LY + Q L H
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLY--KLLKTQHLSNDHICYFLYQILRGLKYIHS 144
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEVK- 183
V+H+D K +N+L++ K+ D GL R D G ++ A + A E+
Sbjct: 145 A--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 184 EFRRFSEKSDVYSFGVFLLELVSGR 208
+ +++ D++S G L E++S R
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 11/205 (5%)
Query: 11 FSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKKRPGAPTQEF----IDEVCFLASIQHRNLV 65
+++ + IGEG +G V + + VAIKK Q + + E+ L +H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 66 TLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
+ + ++ + YI + LY + Q L H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLY--KLLKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEVK- 183
V+H+D K +N+L++ K+ D GL R D G ++ A + A E+
Sbjct: 143 A--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 184 EFRRFSEKSDVYSFGVFLLELVSGR 208
+ +++ D++S G L E++S R
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVK-EFRRF 188
++H+D K +NV V+ED ++ D GL ++ G A + A E+ + +
Sbjct: 144 IIHRDLKPSNVAVNEDCELRILDFGLAR-QADEEMTG----YVATRWYRAPEIMLNWMHY 198
Query: 189 SEKSDVYSFGVFLLELVSGR 208
++ D++S G + EL+ G+
Sbjct: 199 NQTVDIWSVGCIMAELLQGK 218
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 84/215 (39%), Gaps = 44/215 (20%)
Query: 14 KNLIGEGKFGEVYKGLLQDG---MLVAIK--KRPGAPTQE--FIDEVCFLASIQHRNLVT 66
++++G G F EV L +D LVAIK + +E +E+ L I+H N+V
Sbjct: 23 RDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 67 LLGYCQENNLQFLIYEYIPNGS-----VSIHLYGPSQVSR------QKLEFKHRLSIXXX 115
L + +LI + + G V Y SR +++ H L I
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI--- 137
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVL---VDEDFIAKVADAGLRNFLGRTDVAGPSSQVT 172
VH+D K N+L +DED ++D GL D S
Sbjct: 138 ---------------VHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTAC 179
Query: 173 ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
++A EV + +S+ D +S GV L+ G
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQ-VTADEIFLASEVKEFRRF 188
V+H+D K+ ++L+ D K++D G F + P + + ++A EV +
Sbjct: 162 VIHRDIKSDSILLTLDGRVKLSDFG---FCAQISKDVPKRKXLVGTPYWMAPEVISRSLY 218
Query: 189 SEKSDVYSFGVFLLELVSG 207
+ + D++S G+ ++E+V G
Sbjct: 219 ATEVDIWSLGIMVIEMVDG 237
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 68/159 (42%), Gaps = 14/159 (8%)
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
++E L ++ LV L ++N+ +++ EY+ G + HL + S F
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPS 168
+ ++++D K N+L+D+ +V D G + GRT +
Sbjct: 149 QIVLTFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 169 SQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A EI L+ + +++ D ++ GV + E+ +G
Sbjct: 202 PEALAPEIILS------KGYNKAVDWWALGVLIYEMAAG 234
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 81/199 (40%), Gaps = 20/199 (10%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEF-IDEVCFLASIQHRNLVTLLGYCQEN 74
+G G FGEV++ Q G A+KK + F ++E+ A + +V L G +E
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKK---VRLEVFRVEELVACAGLSSPRIVPLYGAVREG 138
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKD 134
+ E + GS+ Q+ +Q ++ R++H D
Sbjct: 139 PWVNIFMELLEGGSLG-------QLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGD 191
Query: 135 FKTANVLVDEDFI-AKVADAGLR-----NFLGRTDVAGPSSQVTADEIFLASEVKEFRRF 188
K NVL+ D A + D G + LG++ + G + E +A EV +
Sbjct: 192 VKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTG--DYIPGTETHMAPEVVMGKPC 249
Query: 189 SEKSDVYSFGVFLLELVSG 207
K D++S +L +++G
Sbjct: 250 DAKVDIWSSCCMMLHMLNG 268
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 87/213 (40%), Gaps = 21/213 (9%)
Query: 6 LATKNFSDKNLIGEGKFGEVY-KGLLQDGMLVAIK--KRPGAPTQEFIDEV-----CFLA 57
L ++F +IG G + +V L + + A+K K+ E ID V F
Sbjct: 6 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 65
Query: 58 SIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEF-KHRLSIXXXX 116
+ H LV L Q + F + EY+ G + H+ ++ + F +S+
Sbjct: 66 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY 125
Query: 117 XXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADE 175
++++D K NVL+D + K+ D G+ + L D +S
Sbjct: 126 LHERG--------IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---TSXFCGTP 174
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
++A E+ + D ++ GV + E+++GR
Sbjct: 175 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 207
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQ-VTADEIFLASEVKEFRR 187
RV+H+D K N+ +++D K+ D GL + + G + + ++A EV +
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLAT---KIEFDGERKKTLCGTPNYIAPEVLCKKG 218
Query: 188 FSEKSDVYSFGVFLLELVSGR 208
S + D++S G L L+ G+
Sbjct: 219 HSFEVDIWSLGCILYTLLVGK 239
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 79/212 (37%), Gaps = 27/212 (12%)
Query: 9 KNFSDKNLIGEGKFGEVYKGL-LQDGMLVAIKK--RP---GAPTQEFIDEVCFLASIQHR 62
K + IG G G V G+ VA+KK RP + E+ L + H+
Sbjct: 24 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHK 83
Query: 63 NLVTLLG-YCQENNLQ-----FLIYEYI-PNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
N+++LL + + L+ +L+ E + N IH+ E H
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHM-----------ELDHERMSYLL 132
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
++H+D K +N++V D K+ D GL + P
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTP---YVVTR 189
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A EV ++ D++S G + ELV G
Sbjct: 190 YYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 11/205 (5%)
Query: 11 FSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKKRPGAPTQEF----IDEVCFLASIQHRNLV 65
+++ + IGEG +G V + + VAIKK Q + + E+ L +H N++
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 92
Query: 66 TLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
+ + ++ + YI + LY + Q L H
Sbjct: 93 GINDIIRAPTIEQMKDVYIVQDLMETDLY--KLLKTQHLSNDHICYFLYQILRGLKYIHS 150
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEVK- 183
V+H+D K +N+L++ K+ D GL R D G ++ A + A E+
Sbjct: 151 A--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 208
Query: 184 EFRRFSEKSDVYSFGVFLLELVSGR 208
+ +++ D++S G L E++S R
Sbjct: 209 NSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 11/205 (5%)
Query: 11 FSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKKRPGAPTQEF----IDEVCFLASIQHRNLV 65
+++ + IGEG +G V + + VAIKK Q + + E+ L +H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 66 TLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
+ + ++ + YI + LY + Q L H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLY--KLLKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEVK- 183
V+H+D K +N+L++ K+ D GL R D G ++ A + A E+
Sbjct: 143 A--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 184 EFRRFSEKSDVYSFGVFLLELVSGR 208
+ +++ D++S G L E++S R
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 99/254 (38%), Gaps = 69/254 (27%)
Query: 17 IGEGKFGEVYKG--LLQDGMLVAIKK------RPGAPTQEFIDEVCFL---ASIQHRNLV 65
IGEG +G+V+K L G VA+K+ G P I EV L + +H N+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLST-IREVAVLRHLETFEHPNVV 77
Query: 66 TLLGYC------QENNLQFLIYEYIPNGSVSIHLYG------PSQVSR-------QKLEF 106
L C +E L L++E++ + ++ +L P++ + + L+F
Sbjct: 78 RLFDVCTVSRTDRETKLT-LVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 107 KHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAG 166
H RVVH+D K N+LV K+AD GL +A
Sbjct: 136 LH------------------SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS-FQMAL 176
Query: 167 PSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELV 226
S VT + A EV ++ D++S G E+ + L
Sbjct: 177 TSVVVTL--WYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK---------------PLF 219
Query: 227 QNSRDFSNLLKILD 240
+ S D L KILD
Sbjct: 220 RGSSDVDQLGKILD 233
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 68/159 (42%), Gaps = 14/159 (8%)
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
++E L ++ LV L ++N+ +++ EY+ G + HL + S F
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPS 168
+ ++++D K N+L+D+ +V D G + GRT +
Sbjct: 149 QIVLTFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGT 201
Query: 169 SQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A EI L+ + +++ D ++ GV + E+ +G
Sbjct: 202 PEYLAPEIILS------KGYNKAVDWWALGVLIYEMAAG 234
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 86/207 (41%), Gaps = 15/207 (7%)
Query: 11 FSDKNLIGEGKFGEV---YKGLLQDGMLVAIKKRPGAPTQEF----IDEVCFLASIQHRN 63
+++ + IGEG +G V Y L + + VAIKK Q + + E+ L +H N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXX 123
++ + + ++ + YI + LY + Q L H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY--KLLKTQHLSNDHICYFLYQILRGLKYI 144
Query: 124 XXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEV 182
V+H+D K +N+L++ K+ D GL R D G + A + A E+
Sbjct: 145 HSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEI 202
Query: 183 K-EFRRFSEKSDVYSFGVFLLELVSGR 208
+ +++ D++S G L E++S R
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 86/207 (41%), Gaps = 15/207 (7%)
Query: 11 FSDKNLIGEGKFGEV---YKGLLQDGMLVAIKKRPGAPTQEF----IDEVCFLASIQHRN 63
+++ + IGEG +G V Y L + + VAIKK Q + + E+ L +H N
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 87
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXX 123
++ + + ++ + YI + LY + Q L H
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY--KLLKTQHLSNDHICYFLYQILRGLKYI 145
Query: 124 XXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEV 182
V+H+D K +N+L++ K+ D GL R D G + A + A E+
Sbjct: 146 HSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEI 203
Query: 183 K-EFRRFSEKSDVYSFGVFLLELVSGR 208
+ +++ D++S G L E++S R
Sbjct: 204 MLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 84/203 (41%), Gaps = 16/203 (7%)
Query: 5 SLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASIQHRNL 64
+L T +F L+ + G Y + D V K+ + ++E L ++ L
Sbjct: 69 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQ----IEHTLNEKRILQAVNFPFL 124
Query: 65 VTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXX 124
V L ++N+ +++ EY+ G + HL + S F +
Sbjct: 125 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD-- 182
Query: 125 XXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKE 184
++++D K N+L+D+ +V D G F R V G + + +LA E+
Sbjct: 183 -----LIYRDLKPENLLIDQQGYIQVTDFG---FAKR--VKGATWTLCGTPEYLAPEIIL 232
Query: 185 FRRFSEKSDVYSFGVFLLELVSG 207
+ +++ D ++ GV + E+ +G
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAG 255
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 84/215 (39%), Gaps = 44/215 (20%)
Query: 14 KNLIGEGKFGEVYKGLLQDG---MLVAIK--KRPGAPTQE--FIDEVCFLASIQHRNLVT 66
++++G G F EV L +D LVAIK + +E +E+ L I+H N+V
Sbjct: 23 RDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 67 LLGYCQENNLQFLIYEYIPNGS-----VSIHLYGPSQVSR------QKLEFKHRLSIXXX 115
L + +LI + + G V Y SR +++ H L I
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI--- 137
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVL---VDEDFIAKVADAGLRNFLGRTDVAGPSSQVT 172
VH+D K N+L +DED ++D GL D S
Sbjct: 138 ---------------VHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTAC 179
Query: 173 ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
++A EV + +S+ D +S GV L+ G
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 67/159 (42%), Gaps = 14/159 (8%)
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
++E L ++ L L ++N+ +++ EY P G + HL R+ F
Sbjct: 90 LNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL-------RRIGRFXEP 142
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPS 168
+ ++++D K N+++D+ KV D G + GRT +
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGT 202
Query: 169 SQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A EI L+ + +++ D ++ GV + E+ +G
Sbjct: 203 PEYLAPEIILS------KGYNKAVDWWALGVLIYEMAAG 235
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 84/204 (41%), Gaps = 18/204 (8%)
Query: 5 SLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASIQHRNL 64
+L T +F L+ + G Y + D V K+ + ++E L ++ L
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQ----IEHTLNEKRILQAVNFPFL 103
Query: 65 VTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXX 124
V L ++N+ +++ EY+ G + HL + S F +
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD-- 161
Query: 125 XXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEVK 183
++++D K N+L+D+ +V D G + GRT + + A EI L+
Sbjct: 162 -----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS---- 212
Query: 184 EFRRFSEKSDVYSFGVFLLELVSG 207
+ +++ D ++ GV + E+ +G
Sbjct: 213 --KGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 68/159 (42%), Gaps = 14/159 (8%)
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
++E L ++ LV L ++N+ +++ EY+ G + HL + S F
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPS 168
+ ++++D K N+L+D+ +V D G + GRT +
Sbjct: 150 QIVLTFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 202
Query: 169 SQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A EI L+ + +++ D ++ GV + E+ +G
Sbjct: 203 PEYLAPEIILS------KGYNKAVDWWALGVLIYEMAAG 235
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 84/204 (41%), Gaps = 18/204 (8%)
Query: 5 SLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASIQHRNL 64
+L T +F L+ + G Y + D V K+ + ++E L ++ L
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQ----IEHTLNEKRILQAVNFPFL 103
Query: 65 VTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXX 124
V L ++N+ +++ EY+ G + HL + S F +
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD-- 161
Query: 125 XXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEVK 183
++++D K N+L+D+ +V D G + GRT + + A EI L+
Sbjct: 162 -----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS---- 212
Query: 184 EFRRFSEKSDVYSFGVFLLELVSG 207
+ +++ D ++ GV + E+ +G
Sbjct: 213 --KGYNKAVDWWALGVLIYEMAAG 234
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 15/207 (7%)
Query: 11 FSDKNLIGEGKFGEV---YKGLLQDGMLVAIKKRPGAPTQEF----IDEVCFLASIQHRN 63
+++ + IGEG +G V Y L + + VAI+K Q + + E+ L +H N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 64 LVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXX 123
++ + + ++ + YI + LY + Q L H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLY--KLLKTQHLSNDHICYFLYQILRGLKYI 144
Query: 124 XXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEV 182
V+H+D K +N+L++ K+ D GL R D G ++ A + A E+
Sbjct: 145 HSA--NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 183 K-EFRRFSEKSDVYSFGVFLLELVSGR 208
+ +++ D++S G L E++S R
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 68/159 (42%), Gaps = 14/159 (8%)
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
++E L ++ LV L ++N+ +++ EY+ G + HL + S F
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPS 168
+ ++++D K N+L+D+ +V D G + GRT +
Sbjct: 149 QIVLTFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 169 SQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A EI L+ + +++ D ++ GV + E+ +G
Sbjct: 202 PEYLAPEIILS------KGYNKAVDWWALGVLIYEMAAG 234
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 99/254 (38%), Gaps = 69/254 (27%)
Query: 17 IGEGKFGEVYKG--LLQDGMLVAIKK------RPGAPTQEFIDEVCFL---ASIQHRNLV 65
IGEG +G+V+K L G VA+K+ G P I EV L + +H N+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLST-IREVAVLRHLETFEHPNVV 77
Query: 66 TLLGYC------QENNLQFLIYEYIPNGSVSIHLYG------PSQVSR-------QKLEF 106
L C +E L L++E++ + ++ +L P++ + + L+F
Sbjct: 78 RLFDVCTVSRTDRETKLT-LVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 107 KHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAG 166
H RVVH+D K N+LV K+AD GL +A
Sbjct: 136 LH------------------SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS-FQMAL 176
Query: 167 PSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELV 226
S VT + A EV ++ D++S G E+ + L
Sbjct: 177 TSVVVTL--WYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK---------------PLF 219
Query: 227 QNSRDFSNLLKILD 240
+ S D L KILD
Sbjct: 220 RGSSDVDQLGKILD 233
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVK-EFRRF 188
++H+D K +NV V+ED ++ D GL ++ G A + A E+ + +
Sbjct: 152 IIHRDLKPSNVAVNEDSELRILDFGLAR-QADEEMTG----YVATRWYRAPEIMLNWMHY 206
Query: 189 SEKSDVYSFGVFLLELVSGR 208
++ D++S G + EL+ G+
Sbjct: 207 NQTVDIWSVGCIMAELLQGK 226
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 68/159 (42%), Gaps = 14/159 (8%)
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
++E L ++ LV L ++N+ +++ EY+ G + HL + S F
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPS 168
+ ++++D K N+L+D+ +V D G + GRT +
Sbjct: 149 QIVLTFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 169 SQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A EI L+ + +++ D ++ GV + E+ +G
Sbjct: 202 PEYLAPEIILS------KGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 99/254 (38%), Gaps = 69/254 (27%)
Query: 17 IGEGKFGEVYKG--LLQDGMLVAIKK------RPGAPTQEFIDEVCFL---ASIQHRNLV 65
IGEG +G+V+K L G VA+K+ G P I EV L + +H N+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLST-IREVAVLRHLETFEHPNVV 77
Query: 66 TLLGYC------QENNLQFLIYEYIPNGSVSIHLYG------PSQVSR-------QKLEF 106
L C +E L L++E++ + ++ +L P++ + + L+F
Sbjct: 78 RLFDVCTVSRTDRETKLT-LVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 107 KHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAG 166
H RVVH+D K N+LV K+AD GL +A
Sbjct: 136 LH------------------SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS-FQMAL 176
Query: 167 PSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELV 226
S VT + A EV ++ D++S G E+ + L
Sbjct: 177 TSVVVTL--WYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK---------------PLF 219
Query: 227 QNSRDFSNLLKILD 240
+ S D L KILD
Sbjct: 220 RGSSDVDQLGKILD 233
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVK-EFRRF 188
++H+D K +NV V+ED ++ D GL ++ G A + A E+ + +
Sbjct: 152 IIHRDLKPSNVAVNEDSELRILDFGLAR-QADEEMTG----YVATRWYRAPEIMLNWMHY 206
Query: 189 SEKSDVYSFGVFLLELVSGR 208
++ D++S G + EL+ G+
Sbjct: 207 NQTVDIWSVGCIMAELLQGK 226
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 68/159 (42%), Gaps = 14/159 (8%)
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
++E L ++ LV L ++N+ +++ EY+ G + HL + S F
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPS 168
+ ++++D K N+L+D+ +V D G + GRT +
Sbjct: 149 QIVLTFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 169 SQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A EI L+ + +++ D ++ GV + E+ +G
Sbjct: 202 PEYLAPEIILS------KGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 68/159 (42%), Gaps = 14/159 (8%)
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
++E L ++ LV L ++N+ +++ EY+ G + HL + S F
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPS 168
+ ++++D K N+L+D+ +V D G + GRT +
Sbjct: 149 QIVLTFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 169 SQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A EI L+ + +++ D ++ GV + E+ +G
Sbjct: 202 PEYLAPEIILS------KGYNKAVDWWALGVLIYEMAAG 234
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 81/199 (40%), Gaps = 20/199 (10%)
Query: 17 IGEGKFGEVYKGL-LQDGMLVAIKKRPGAPTQEF-IDEVCFLASIQHRNLVTLLGYCQEN 74
+G G FGEV++ Q G A+KK + F ++E+ A + +V L G +E
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKK---VRLEVFRVEELVACAGLSSPRIVPLYGAVREG 136
Query: 75 NLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKD 134
+ E + GS+ Q+ +Q ++ R++H D
Sbjct: 137 PWVNIFMELLEGGSLG-------QLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGD 189
Query: 135 FKTANVLVDEDFI-AKVADAGLR-----NFLGRTDVAGPSSQVTADEIFLASEVKEFRRF 188
K NVL+ D A + D G + LG++ + G + E +A EV +
Sbjct: 190 VKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTG--DYIPGTETHMAPEVVMGKPC 247
Query: 189 SEKSDVYSFGVFLLELVSG 207
K D++S +L +++G
Sbjct: 248 DAKVDIWSSCCMMLHMLNG 266
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 11/205 (5%)
Query: 11 FSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKKRPGAPTQEF----IDEVCFLASIQHRNLV 65
+++ + IGEG +G V + + VAIKK Q + + E+ L +H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 66 TLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXX 125
+ + ++ + YI + LY + Q L H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLY--KLLKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 126 XXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEVK- 183
V+H+D K +N+L++ K+ D GL R D G ++ A + A E+
Sbjct: 143 A--NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 184 EFRRFSEKSDVYSFGVFLLELVSGR 208
+ +++ D++S G L E++S R
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 36.2 bits (82), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEVK-EFRR 187
V+H+D K +N+L++ K+ D GL R D G ++ A + A E+ +
Sbjct: 165 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 224
Query: 188 FSEKSDVYSFGVFLLELVSGR 208
+++ D++S G L E++S R
Sbjct: 225 YTKSIDIWSVGCILAEMLSNR 245
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 87/216 (40%), Gaps = 28/216 (12%)
Query: 2 EELSLATKNFSDKNLIGEGKFGEVYKGLLQD---GMLVAIKKRPGAPTQEF-IDEVCFLA 57
EE+ AT +G G FGEV++ ++D G A+KK + F +E+ A
Sbjct: 71 EEVHWATHQLR----LGRGSFGEVHR--MEDKQTGFQCAVKK---VRLEVFRAEELMACA 121
Query: 58 SIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXX 117
+ +V L G +E + E + GS+ Q+ +++ ++
Sbjct: 122 GLTSPRIVPLYGAVREGPWVNIFMELLEGGSLG-------QLVKEQGCLPEDRALYYLGQ 174
Query: 118 XXXXXXXXXXPRVVHKDFKTANVLVDEDFI-AKVADAGLR-----NFLGRTDVAGPSSQV 171
R++H D K NVL+ D A + D G + LG+ + G +
Sbjct: 175 ALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTG--DYI 232
Query: 172 TADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
E +A EV R K DV+S +L +++G
Sbjct: 233 PGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 9/84 (10%)
Query: 130 VVHKDFKTANVLV---DEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEV---K 183
++H+D K NVL+ +ED + K+ D G LG T + + +LA EV
Sbjct: 141 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM---RTLCGTPTYLAPEVLVSV 197
Query: 184 EFRRFSEKSDVYSFGVFLLELVSG 207
++ D +S GV L +SG
Sbjct: 198 GTAGYNRAVDCWSLGVILFICLSG 221
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/157 (19%), Positives = 65/157 (41%), Gaps = 24/157 (15%)
Query: 61 HRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXX 120
H +++TL+ + ++ FL+++ + G + +L +K+ + +
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLT-------EKVALSEKETRSIMRSLLE 211
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAG----------LRNFLGRTDVAGPSSQ 170
+VH+D K N+L+D++ +++D G LR G P
Sbjct: 212 AVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAP--- 268
Query: 171 VTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
EI S + + ++ D+++ GV L L++G
Sbjct: 269 ----EILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 9/84 (10%)
Query: 130 VVHKDFKTANVLV---DEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEV---K 183
++H+D K NVL+ +ED + K+ D G LG T + + +LA EV
Sbjct: 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM---RTLCGTPTYLAPEVLVSV 191
Query: 184 EFRRFSEKSDVYSFGVFLLELVSG 207
++ D +S GV L +SG
Sbjct: 192 GTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 9/84 (10%)
Query: 130 VVHKDFKTANVLV---DEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEV---K 183
++H+D K NVL+ +ED + K+ D G LG T + + +LA EV
Sbjct: 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM---RTLCGTPTYLAPEVLVSV 191
Query: 184 EFRRFSEKSDVYSFGVFLLELVSG 207
++ D +S GV L +SG
Sbjct: 192 GTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 9/84 (10%)
Query: 130 VVHKDFKTANVLV---DEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEV---K 183
++H+D K NVL+ +ED + K+ D G LG T + + +LA EV
Sbjct: 134 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM---RTLCGTPTYLAPEVLVSV 190
Query: 184 EFRRFSEKSDVYSFGVFLLELVSG 207
++ D +S GV L +SG
Sbjct: 191 GTAGYNRAVDCWSLGVILFICLSG 214
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 9/84 (10%)
Query: 130 VVHKDFKTANVLV---DEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEV---K 183
++H+D K NVL+ +ED + K+ D G LG T + + +LA EV
Sbjct: 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM---RTLCGTPTYLAPEVLVSV 191
Query: 184 EFRRFSEKSDVYSFGVFLLELVSG 207
++ D +S GV L +SG
Sbjct: 192 GTAGYNRAVDCWSLGVILFICLSG 215
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 83/206 (40%), Gaps = 21/206 (10%)
Query: 16 LIGEGKFGEVYKGLLQD-GMLVAIK--------KRPGAPTQEFIDEVCFLASIQHRNLVT 66
+IG+G F V + + ++ G A+K PG T++ E ++H ++V
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 92
Query: 67 LLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXX 126
LL + + ++++E++ + + V R F + ++
Sbjct: 93 LLETYSSDGMLYMVFEFMDGADLCFEI-----VKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 127 XP--RVVHKDFKTANVLV---DEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASE 181
++H+D K VL+ + K+ G+ LG + + T F+A E
Sbjct: 148 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPH--FMAPE 205
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVSG 207
V + + + DV+ GV L L+SG
Sbjct: 206 VVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 89/217 (41%), Gaps = 51/217 (23%)
Query: 17 IGEGKFGEVYKGLLQDGM-LVAIKK------RPGAPTQEFIDEVCFLASIQHRNLVTLLG 69
IGEG +G V+K ++ +VA+K+ G P+ + E+C L ++H+N+V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSA-LREICLLKELKHKNIVRLHD 68
Query: 70 YCQENNLQFLIYEYIP----------NGSVSIHLYGPSQVSRQK-LEFKHRLSIXXXXXX 118
+ L++E+ NG + + K L F H +
Sbjct: 69 VLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN------- 121
Query: 119 XXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVT------ 172
V+H+D K N+L++ + K+A+ GL G V S++V
Sbjct: 122 -----------VLHRDLKPQNLLINRNGELKLANFGLARAFG-IPVRCYSAEVVTLWYRP 169
Query: 173 ADEIFLASEVKEFRRFSEKSDVYSFGVFLLELV-SGR 208
D +F A + +S D++S G EL +GR
Sbjct: 170 PDVLFGA------KLYSTSIDMWSAGCIFAELANAGR 200
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 83/206 (40%), Gaps = 21/206 (10%)
Query: 16 LIGEGKFGEVYKGLLQD-GMLVAIK--------KRPGAPTQEFIDEVCFLASIQHRNLVT 66
+IG+G F V + + ++ G A+K PG T++ E ++H ++V
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 67 LLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXX 126
LL + + ++++E++ + + V R F + ++
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEI-----VKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 127 XP--RVVHKDFKTANVLV---DEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASE 181
++H+D K VL+ + K+ G+ LG + + T F+A E
Sbjct: 146 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPH--FMAPE 203
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVSG 207
V + + + DV+ GV L L+SG
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 80/226 (35%), Gaps = 49/226 (21%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGL-LQDGMLVAIKK------RPGAPTQEFIDEVCFL-- 56
+AT + IG G +G VYK G VA+K G P + EV L
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPIST-VREVALLRR 59
Query: 57 -ASIQHRNLVTLLGYCQENNLQ-----FLIYEYI------------PNGSVSIHLYGPSQ 98
+ +H N+V L+ C + L++E++ P G + + +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 99 VSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNF 158
+ L+F H I VH+D K N+LV K+AD GL
Sbjct: 120 QFLRGLDFLHANCI------------------VHRDLKPENILVTSGGTVKLADFGLARI 161
Query: 159 LGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLEL 204
P V + A EV ++ D++S G E+
Sbjct: 162 YSYQMALAP---VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 84/204 (41%), Gaps = 18/204 (8%)
Query: 5 SLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASIQHRNL 64
+L T +F L+ + G Y + D V K+ + ++E L ++ L
Sbjct: 69 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQ----IEHTLNEKRILQAVNFPFL 124
Query: 65 VTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXX 124
V L ++N+ +++ EY+ G + HL R+ F +
Sbjct: 125 VKLEFSFKDNSNLYMVMEYVAGGEMFSHL-------RRIGRFXEPHARFYAAQIVLTFEY 177
Query: 125 XXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEVK 183
++++D K N+L+D+ +V D G + GRT + + A EI L+
Sbjct: 178 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS---- 233
Query: 184 EFRRFSEKSDVYSFGVFLLELVSG 207
+ +++ D ++ GV + E+ +G
Sbjct: 234 --KGYNKAVDWWALGVLIYEMAAG 255
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 84/204 (41%), Gaps = 18/204 (8%)
Query: 5 SLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASIQHRNL 64
+L T +F L+ + G Y + D V K+ + ++E L ++ L
Sbjct: 43 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQ----IEHTLNEKRILQAVNFPFL 98
Query: 65 VTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXX 124
V L ++N+ +++ EY+ G + HL R+ F +
Sbjct: 99 VKLEFSFKDNSNLYMVMEYVAGGEMFSHL-------RRIGRFXEPHARFYAAQIVLTFEY 151
Query: 125 XXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEVK 183
++++D K N+L+D+ +V D G + GRT + + A EI L+
Sbjct: 152 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS---- 207
Query: 184 EFRRFSEKSDVYSFGVFLLELVSG 207
+ +++ D ++ GV + E+ +G
Sbjct: 208 --KGYNKAVDWWALGVLIYEMAAG 229
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 68/159 (42%), Gaps = 14/159 (8%)
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
++E L ++ LV L ++N+ +++ EY+ G + HL + + F
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAA 148
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPS 168
+ ++++D K N+L+D+ +V D G + GRT +
Sbjct: 149 QIVLTFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 169 SQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A EI L+ + +++ D ++ GV + E+ +G
Sbjct: 202 PEYLAPEIILS------KGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 68/159 (42%), Gaps = 14/159 (8%)
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
++E L ++ LV L ++N+ +++ EY+ G + HL R+ F
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-------RRIGRFXEP 141
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPS 168
+ ++++D K N+L+D+ +V D G + GRT +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 169 SQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A EI L+ + +++ D ++ GV + E+ +G
Sbjct: 202 PEYLAPEIILS------KGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 84/204 (41%), Gaps = 18/204 (8%)
Query: 5 SLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASIQHRNL 64
+L T +F L+ + G Y + D V K+ + ++E L ++ L
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQ----IEHTLNEKRILQAVNFPFL 103
Query: 65 VTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXX 124
V L ++N+ +++ EY+ G + HL R+ F +
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHL-------RRIGRFXEPHARFYAAQIVLTFEY 156
Query: 125 XXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEVK 183
++++D K N+L+D+ +V D G + GRT + + A EI L+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS---- 212
Query: 184 EFRRFSEKSDVYSFGVFLLELVSG 207
+ +++ D ++ GV + E+ +G
Sbjct: 213 --KGYNKAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 35.4 bits (80), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 68/159 (42%), Gaps = 14/159 (8%)
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
++E L ++ LV L ++N+ +++ EY+ G + HL R+ F
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-------RRIGRFXEP 141
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPS 168
+ ++++D K N+L+D+ +V D G + GRT +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 169 SQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A EI L+ + +++ D ++ GV + E+ +G
Sbjct: 202 PEYLAPEIILS------KGYNKAVDWWALGVLIYEMAAG 234
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 35.4 bits (80), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 94/214 (43%), Gaps = 29/214 (13%)
Query: 14 KNLIGEGKFGEVYKGL----LQDGMLVAIKKRPGAPTQEFIDEVCFLASIQ-HRNLVTLL 68
++++GEG V + Q+ + I+K+PG EV L Q HRN++ L+
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 69 GYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP 128
+ +E + +L++E + GS+ H++ ++ F +
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIH-------KRRHFNELEASVVVQDVASALDFLHNK 130
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNF-LGR-TDVAGPSSQVTADEI--------FL 178
+ H+D K N+L + +V+ + +F LG + G S ++ E+ ++
Sbjct: 131 GIAHRDLKPENILCEHP--NQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYM 188
Query: 179 ASEV-----KEFRRFSEKSDVYSFGVFLLELVSG 207
A EV +E + ++ D++S GV L L+SG
Sbjct: 189 APEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 9/84 (10%)
Query: 130 VVHKDFKTANVLV---DEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEV---K 183
++H+D K NVL+ +ED + K+ D G LG T + + +LA EV
Sbjct: 260 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM---RTLCGTPTYLAPEVLVSV 316
Query: 184 EFRRFSEKSDVYSFGVFLLELVSG 207
++ D +S GV L +SG
Sbjct: 317 GTAGYNRAVDCWSLGVILFICLSG 340
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 68/159 (42%), Gaps = 14/159 (8%)
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
++E L ++ LV L ++N+ +++ EY+ G + HL + S F
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPS 168
+ ++++D K N+L+D+ +V D G + GRT +
Sbjct: 149 QIVLTFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 169 SQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A EI L+ + +++ D ++ GV + ++ +G
Sbjct: 202 PEYLAPEIILS------KGYNKAVDWWALGVLIYQMAAG 234
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 9/84 (10%)
Query: 130 VVHKDFKTANVLV---DEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEV---K 183
++H+D K NVL+ +ED + K+ D G LG T + + +LA EV
Sbjct: 274 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM---RTLCGTPTYLAPEVLVSV 330
Query: 184 EFRRFSEKSDVYSFGVFLLELVSG 207
++ D +S GV L +SG
Sbjct: 331 GTAGYNRAVDCWSLGVILFICLSG 354
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 35.0 bits (79), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 80/226 (35%), Gaps = 49/226 (21%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGL-LQDGMLVAIKK------RPGAPTQEFIDEVCFL-- 56
+AT + IG G +G VYK G VA+K G P + EV L
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPIST-VREVALLRR 59
Query: 57 -ASIQHRNLVTLLGYCQENNLQ-----FLIYEYI------------PNGSVSIHLYGPSQ 98
+ +H N+V L+ C + L++E++ P G + + +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 99 VSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNF 158
+ L+F H I VH+D K N+LV K+AD GL
Sbjct: 120 QFLRGLDFLHANCI------------------VHRDLKPENILVTSGGTVKLADFGLARI 161
Query: 159 LGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLEL 204
P V + A EV ++ D++S G E+
Sbjct: 162 YSYQMALDP---VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 35.0 bits (79), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 68/158 (43%), Gaps = 12/158 (7%)
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
++E L ++ LV L ++N+ +++ EY+ G + HL + S F
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSS 169
+ ++++D K N+++D+ +V D G F R V G +
Sbjct: 149 QIVLTFEYLHSLD-------LIYRDLKPENLIIDQQGYIQVTDFG---FAKR--VKGRTW 196
Query: 170 QVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ +LA E+ + +++ D ++ GV + E+ +G
Sbjct: 197 XLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 35.0 bits (79), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 92/228 (40%), Gaps = 43/228 (18%)
Query: 10 NFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKKRPGAPTQEFIDEVCFLASIQHRNLVTLL 68
+F + LIG G FG+V+K + DG I+ R ++ EV LA + H N+V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIR-RVKYNNEKAEREVKALAKLDHVNIVHYN 71
Query: 69 GYCQENNLQFLIYEYIP---NGSVSIHLYGP---SQVSRQK-------LEF--------- 106
G C + ++Y P + S+ Y P SR K +EF
Sbjct: 72 G-CWDG------FDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQW 124
Query: 107 --KHR-------LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRN 157
K R L++ +++H+D K +N+ + + K+ D GL
Sbjct: 125 IEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVT 184
Query: 158 FLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELV 205
L G ++ +++ E + + ++ D+Y+ G+ L EL+
Sbjct: 185 SLKND---GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 81/206 (39%), Gaps = 26/206 (12%)
Query: 17 IGEGKFGEVYK------GLLQDGMLVAIKK----RPGAPTQEFIDEVCFLASIQHRNLVT 66
+G GKF V K GL + ++ R G ++ EV L IQH N++T
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 67 LLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQK-LEFKHRLSIXXXXXXXXXXXXX 125
L + LI E + G + L ++ ++ EF ++
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--------LNGVYYL 130
Query: 126 XXPRVVHKDFKTANVLVDEDFIA----KVADAGLRNFLGRTDVAGPSSQVTADEIFLASE 181
++ H D K N+++ + + K+ D GL + + D + F+A E
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPEFVAPE 187
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVSG 207
+ + ++D++S GV L+SG
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 34.7 bits (78), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 85/214 (39%), Gaps = 29/214 (13%)
Query: 8 TKNFSDKNLIGEGKFGEVYK------GLLQDGMLVAIKKRPGAPTQEFIDEVCFLASIQH 61
+ N+ K +G+G F V + GL ++ KK Q+ E +QH
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 62 RNLVTLLGYCQENNLQFLIYEYIPNGS-----VSIHLYGPSQVSRQKLEFKHRLSIXXXX 116
N+V L QE + +L+++ + G V+ Y + S + ++
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 147
Query: 117 XXXXXXXXXXXPRVVHKDFKTANVLV---DEDFIAKVADAGLRNFLGRTDVAGPSSQVTA 173
+VH++ K N+L+ + K+AD GL + ++ +
Sbjct: 148 G------------IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPG 195
Query: 174 DEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+L+ EV + +S+ D+++ GV L L+ G
Sbjct: 196 ---YLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 34.7 bits (78), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 81/206 (39%), Gaps = 26/206 (12%)
Query: 17 IGEGKFGEVYK------GLLQDGMLVAIKK----RPGAPTQEFIDEVCFLASIQHRNLVT 66
+G G+F V K GL + ++ R G ++ EV L IQH N++T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 67 LLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXXXXXXXXX 125
L + LI E + G + L ++ ++ EF ++
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--------LNGVYYL 130
Query: 126 XXPRVVHKDFKTANVLVDEDFIA----KVADAGLRNFLGRTDVAGPSSQVTADEIFLASE 181
++ H D K N+++ + + K+ D GL + + D + F+A E
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPAFVAPE 187
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVSG 207
+ + ++D++S GV L+SG
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 34.7 bits (78), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 90/215 (41%), Gaps = 30/215 (13%)
Query: 10 NFSDKNLIGEGKFGEVYKGLLQ-DGMLVAIKKRPGAPTQEFIDEVCFLASIQHRNLVTLL 68
+F + LIG G FG+V+K + DG I KR ++ EV LA + H N+V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVI-KRVKYNNEKAEREVKALAKLDHVNIVHYN 70
Query: 69 GYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEF-----------KHR-------L 110
G C + ++Y P S ++ ++EF K R L
Sbjct: 71 G-CWDG------FDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVL 123
Query: 111 SIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQ 170
++ +++++D K +N+ + + K+ D GL L + D S+
Sbjct: 124 ALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSL-KNDGKRXRSK 182
Query: 171 VTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELV 205
T +++ E + + ++ D+Y+ G+ L EL+
Sbjct: 183 GTLR--YMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 34.7 bits (78), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 85/214 (39%), Gaps = 29/214 (13%)
Query: 8 TKNFSDKNLIGEGKFGEVYK------GLLQDGMLVAIKKRPGAPTQEFIDEVCFLASIQH 61
+ N+ K +G+G F V + GL ++ KK Q+ E +QH
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 62 RNLVTLLGYCQENNLQFLIYEYIPNGS-----VSIHLYGPSQVSRQKLEFKHRLSIXXXX 116
N+V L QE + +L+++ + G V+ Y + S + ++
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 124
Query: 117 XXXXXXXXXXXPRVVHKDFKTANVLV---DEDFIAKVADAGLRNFLGRTDVAGPSSQVTA 173
+VH++ K N+L+ + K+AD GL + ++ +
Sbjct: 125 G------------IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPG 172
Query: 174 DEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+L+ EV + +S+ D+++ GV L L+ G
Sbjct: 173 ---YLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 34.3 bits (77), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 85/212 (40%), Gaps = 28/212 (13%)
Query: 11 FSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQEFID-EVCFLASIQHRNLVTLLG 69
+++ +IG G FG V++ L + VAIKK + F + E+ + ++H N+V L
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKV--LQDKRFKNRELQIMRIVKHPNVVDLKA 99
Query: 70 YCQENN------LQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXX--- 120
+ N L+ EY+P + SR + K + +
Sbjct: 100 FFYSNGDKKDEVFLNLVLEYVPETVY--------RASRHYAKLKQTMPMLLIKLYMYQLL 151
Query: 121 -XXXXXXXPRVVHKDFKTANVLVDEDF-IAKVADAGLRNFLGRTDVAG-PSSQVTADEIF 177
+ H+D K N+L+D + K+ D G L +AG P+ +
Sbjct: 152 RSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL----IAGEPNVSXICSRYY 207
Query: 178 LASE-VKEFRRFSEKSDVYSFGVFLLELVSGR 208
A E + ++ D++S G + EL+ G+
Sbjct: 208 RAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 34.3 bits (77), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 80/226 (35%), Gaps = 49/226 (21%)
Query: 6 LATKNFSDKNLIGEGKFGEVYKGL-LQDGMLVAIKK------RPGAPTQEFIDEVCFL-- 56
+AT + IG G +G VYK G VA+K G P + EV L
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPIST-VREVALLRR 59
Query: 57 -ASIQHRNLVTLLGYCQENNLQ-----FLIYEYI------------PNGSVSIHLYGPSQ 98
+ +H N+V L+ C + L++E++ P G + + +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 99 VSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNF 158
+ L+F H I VH+D K N+LV K+AD GL
Sbjct: 120 QFLRGLDFLHANCI------------------VHRDLKPENILVTSGGTVKLADFGLARI 161
Query: 159 LGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLEL 204
P V + A EV ++ D++S G E+
Sbjct: 162 YSYQMALFP---VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 34.3 bits (77), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 85/214 (39%), Gaps = 29/214 (13%)
Query: 8 TKNFSDKNLIGEGKFGEVYK------GLLQDGMLVAIKKRPGAPTQEFIDEVCFLASIQH 61
+ N+ K +G+G F V + GL ++ KK Q+ E +QH
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 62 RNLVTLLGYCQENNLQFLIYEYIPNGS-----VSIHLYGPSQVSRQKLEFKHRLSIXXXX 116
N+V L QE + +L+++ + G V+ Y + S + ++
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 123
Query: 117 XXXXXXXXXXXPRVVHKDFKTANVLV---DEDFIAKVADAGLRNFLGRTDVAGPSSQVTA 173
+VH++ K N+L+ + K+AD GL + ++ +
Sbjct: 124 G------------IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPG 171
Query: 174 DEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+L+ EV + +S+ D+++ GV L L+ G
Sbjct: 172 ---YLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 34.3 bits (77), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 83/213 (38%), Gaps = 40/213 (18%)
Query: 17 IGEGKFGEV----YKGLLQDGMLVAIKKRP------GAPTQEFIDEVCFLASIQHRNLVT 66
+G G+F V KG ++ IKKR G +E EV L I+H N++T
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 67 LLGYCQENNLQFLIYEYIPNGSV--------SIHLYGPSQVSRQKLEFKHRLSIXXXXXX 118
L + LI E + G + S+ +Q +Q L+ H L
Sbjct: 94 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH------- 146
Query: 119 XXXXXXXXXPRVVHKDFKTANVLVDEDFIA----KVADAGLRNFLGRTDVAGPSSQVTAD 174
R+ H D K N+++ + + K+ D G+ + + + +
Sbjct: 147 --------SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH---KIEAGNEFKNIFGT 195
Query: 175 EIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
F+A E+ + ++D++S GV L+SG
Sbjct: 196 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 34.3 bits (77), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 67/159 (42%), Gaps = 14/159 (8%)
Query: 50 IDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHR 109
++E L ++ LV L ++N+ +++ EY+ G + HL + S F
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 110 LSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPS 168
+ ++++D K N+L+D+ +V D G + GRT +
Sbjct: 149 QIVLTFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 169 SQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A I L+ + +++ D ++ GV + E+ +G
Sbjct: 202 PEYLAPAIILS------KGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 34.3 bits (77), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 83/213 (38%), Gaps = 40/213 (18%)
Query: 17 IGEGKFGEV----YKGLLQDGMLVAIKKRP------GAPTQEFIDEVCFLASIQHRNLVT 66
+G G+F V KG ++ IKKR G +E EV L I+H N++T
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 67 LLGYCQENNLQFLIYEYIPNGSV--------SIHLYGPSQVSRQKLEFKHRLSIXXXXXX 118
L + LI E + G + S+ +Q +Q L+ H L
Sbjct: 80 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH------- 132
Query: 119 XXXXXXXXXPRVVHKDFKTANVLVDEDFIA----KVADAGLRNFLGRTDVAGPSSQVTAD 174
R+ H D K N+++ + + K+ D G+ + + + +
Sbjct: 133 --------SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH---KIEAGNEFKNIFGT 181
Query: 175 EIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
F+A E+ + ++D++S GV L+SG
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 34.3 bits (77), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPS------SQVTADEIFLASEV 182
+V+H+D K +N+LV+E+ K+ D G + R P+ ++ A + A E+
Sbjct: 179 QVIHRDLKPSNLLVNENCELKIGDFG----MARGLCTSPAEHQYFMTEYVATRWYRAPEL 234
Query: 183 K-EFRRFSEKSDVYSFGVFLLELVSGRE 209
+++ D++S G E+++ R+
Sbjct: 235 MLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 34.3 bits (77), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 85/214 (39%), Gaps = 29/214 (13%)
Query: 8 TKNFSDKNLIGEGKFGEVYK------GLLQDGMLVAIKKRPGAPTQEFIDEVCFLASIQH 61
+ N+ K +G+G F V + GL ++ KK Q+ E +QH
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 62 RNLVTLLGYCQENNLQFLIYEYIPNGS-----VSIHLYGPSQVSRQKLEFKHRLSIXXXX 116
N+V L QE + +L+++ + G V+ Y + S + ++
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 124
Query: 117 XXXXXXXXXXXPRVVHKDFKTANVLV---DEDFIAKVADAGLRNFLGRTDVAGPSSQVTA 173
+VH++ K N+L+ + K+AD GL + ++ +
Sbjct: 125 G------------IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPG 172
Query: 174 DEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+L+ EV + +S+ D+++ GV L L+ G
Sbjct: 173 ---YLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 34.3 bits (77), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 83/213 (38%), Gaps = 40/213 (18%)
Query: 17 IGEGKFGEV----YKGLLQDGMLVAIKKRP------GAPTQEFIDEVCFLASIQHRNLVT 66
+G G+F V KG ++ IKKR G +E EV L I+H N++T
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 67 LLGYCQENNLQFLIYEYIPNGSV--------SIHLYGPSQVSRQKLEFKHRLSIXXXXXX 118
L + LI E + G + S+ +Q +Q L+ H L
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH------- 125
Query: 119 XXXXXXXXXPRVVHKDFKTANVLVDEDFIA----KVADAGLRNFLGRTDVAGPSSQVTAD 174
R+ H D K N+++ + + K+ D G+ + + + +
Sbjct: 126 --------SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH---KIEAGNEFKNIFGT 174
Query: 175 EIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
F+A E+ + ++D++S GV L+SG
Sbjct: 175 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 33.9 bits (76), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 129 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPS------SQVTADEIFLASEV 182
+V+H+D K +N+LV+E+ K+ D G + R P+ ++ A + A E+
Sbjct: 178 QVIHRDLKPSNLLVNENCELKIGDFG----MARGLCTSPAEHQYFMTEYVATRWYRAPEL 233
Query: 183 K-EFRRFSEKSDVYSFGVFLLELVSGRE 209
+++ D++S G E+++ R+
Sbjct: 234 MLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 81/229 (35%), Gaps = 50/229 (21%)
Query: 5 SLATKNFSDKNLIGEGKFGEVYKGL-LQDGMLVAIK--KRPGAPTQEF------IDEVCF 55
S+AT + IG G +G VYK G VA+K + P + EV
Sbjct: 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL 64
Query: 56 L---ASIQHRNLVTLLGYCQENNLQ-----FLIYEYI------------PNGSVSIHLYG 95
L + +H N+V L+ C + L++E++ P G + +
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKD 124
Query: 96 PSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL 155
+ + L+F H I VH+D K N+LV K+AD GL
Sbjct: 125 LMRQFLRGLDFLHANCI------------------VHRDLKPENILVTSGGTVKLADFGL 166
Query: 156 RNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLEL 204
P V + A EV ++ D++S G E+
Sbjct: 167 ARIYSYQMALTP---VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 212
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 81/206 (39%), Gaps = 26/206 (12%)
Query: 17 IGEGKFGEVYK------GLLQDGMLVAIKK----RPGAPTQEFIDEVCFLASIQHRNLVT 66
+G G+F V K GL + ++ R G ++ EV L IQH N++T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 67 LLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQK-LEFKHRLSIXXXXXXXXXXXXX 125
L + LI E + G + L ++ ++ EF ++
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--------LNGVYYL 130
Query: 126 XXPRVVHKDFKTANVLVDEDFIA----KVADAGLRNFLGRTDVAGPSSQVTADEIFLASE 181
++ H D K N+++ + + K+ D GL + + D + F+A E
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPEFVAPE 187
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVSG 207
+ + ++D++S GV L+SG
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 81/206 (39%), Gaps = 26/206 (12%)
Query: 17 IGEGKFGEVYK------GLLQDGMLVAIKK----RPGAPTQEFIDEVCFLASIQHRNLVT 66
+G G+F V K GL + ++ R G ++ EV L IQH N++T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 67 LLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXXXXXXXXX 125
L + LI E + G + L ++ ++ EF ++
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--------LNGVYYL 130
Query: 126 XXPRVVHKDFKTANVLVDEDFIA----KVADAGLRNFLGRTDVAGPSSQVTADEIFLASE 181
++ H D K N+++ + + K+ D GL + + D + F+A E
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPEFVAPE 187
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVSG 207
+ + ++D++S GV L+SG
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 81/206 (39%), Gaps = 26/206 (12%)
Query: 17 IGEGKFGEVYK------GLLQDGMLVAIKK----RPGAPTQEFIDEVCFLASIQHRNLVT 66
+G G+F V K GL + ++ R G ++ EV L IQH N++T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 67 LLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXXXXXXXXX 125
L + LI E + G + L ++ ++ EF ++
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--------LNGVYYL 130
Query: 126 XXPRVVHKDFKTANVLVDEDFIA----KVADAGLRNFLGRTDVAGPSSQVTADEIFLASE 181
++ H D K N+++ + + K+ D GL + + D + F+A E
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPEFVAPE 187
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVSG 207
+ + ++D++S GV L+SG
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 81/206 (39%), Gaps = 26/206 (12%)
Query: 17 IGEGKFGEVYK------GLLQDGMLVAIKK----RPGAPTQEFIDEVCFLASIQHRNLVT 66
+G G+F V K GL + ++ R G ++ EV L IQH N++T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 67 LLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQK-LEFKHRLSIXXXXXXXXXXXXX 125
L + LI E + G + L ++ ++ EF ++
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--------LNGVYYL 130
Query: 126 XXPRVVHKDFKTANVLVDEDFIA----KVADAGLRNFLGRTDVAGPSSQVTADEIFLASE 181
++ H D K N+++ + + K+ D GL + + D + F+A E
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPEFVAPE 187
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVSG 207
+ + ++D++S GV L+SG
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 81/206 (39%), Gaps = 26/206 (12%)
Query: 17 IGEGKFGEVYK------GLLQDGMLVAIKK----RPGAPTQEFIDEVCFLASIQHRNLVT 66
+G G+F V K GL + ++ R G ++ EV L IQH N++T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 67 LLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQK-LEFKHRLSIXXXXXXXXXXXXX 125
L + LI E + G + L ++ ++ EF ++
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--------LNGVYYL 130
Query: 126 XXPRVVHKDFKTANVLVDEDFIA----KVADAGLRNFLGRTDVAGPSSQVTADEIFLASE 181
++ H D K N+++ + + K+ D GL + + D + F+A E
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPEFVAPE 187
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVSG 207
+ + ++D++S GV L+SG
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 81/206 (39%), Gaps = 26/206 (12%)
Query: 17 IGEGKFGEVYK------GLLQDGMLVAIKK----RPGAPTQEFIDEVCFLASIQHRNLVT 66
+G G+F V K GL + ++ R G ++ EV L IQH N++T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 67 LLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQK-LEFKHRLSIXXXXXXXXXXXXX 125
L + LI E + G + L ++ ++ EF ++
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--------LNGVYYL 130
Query: 126 XXPRVVHKDFKTANVLVDEDFIA----KVADAGLRNFLGRTDVAGPSSQVTADEIFLASE 181
++ H D K N+++ + + K+ D GL + + D + F+A E
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPEFVAPE 187
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVSG 207
+ + ++D++S GV L+SG
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 81/206 (39%), Gaps = 26/206 (12%)
Query: 17 IGEGKFGEVYK------GLLQDGMLVAIKK----RPGAPTQEFIDEVCFLASIQHRNLVT 66
+G G+F V K GL + ++ R G ++ EV L IQH N++T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 67 LLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXXXXXXXXX 125
L + LI E + G + L ++ ++ EF ++
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--------LNGVYYL 130
Query: 126 XXPRVVHKDFKTANVLVDEDFIA----KVADAGLRNFLGRTDVAGPSSQVTADEIFLASE 181
++ H D K N+++ + + K+ D GL + + D + F+A E
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPEFVAPE 187
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVSG 207
+ + ++D++S GV L+SG
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 81/206 (39%), Gaps = 26/206 (12%)
Query: 17 IGEGKFGEVYK------GLLQDGMLVAIKK----RPGAPTQEFIDEVCFLASIQHRNLVT 66
+G G+F V K GL + ++ R G ++ EV L IQH N++T
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 67 LLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXXXXXXXXX 125
L + LI E + G + L ++ ++ EF ++
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--------LNGVYYL 129
Query: 126 XXPRVVHKDFKTANVLVDEDFIA----KVADAGLRNFLGRTDVAGPSSQVTADEIFLASE 181
++ H D K N+++ + + K+ D GL + + D + F+A E
Sbjct: 130 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPEFVAPE 186
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVSG 207
+ + ++D++S GV L+SG
Sbjct: 187 IVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 81/206 (39%), Gaps = 26/206 (12%)
Query: 17 IGEGKFGEVYK------GLLQDGMLVAIKK----RPGAPTQEFIDEVCFLASIQHRNLVT 66
+G G+F V K GL + ++ R G ++ EV L IQH N++T
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 67 LLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXXXXXXXXX 125
L + LI E + G + L ++ ++ EF ++
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--------LNGVYYL 129
Query: 126 XXPRVVHKDFKTANVLVDEDFIA----KVADAGLRNFLGRTDVAGPSSQVTADEIFLASE 181
++ H D K N+++ + + K+ D GL + + D + F+A E
Sbjct: 130 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPEFVAPE 186
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVSG 207
+ + ++D++S GV L+SG
Sbjct: 187 IVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 81/206 (39%), Gaps = 26/206 (12%)
Query: 17 IGEGKFGEVYK------GLLQDGMLVAIKK----RPGAPTQEFIDEVCFLASIQHRNLVT 66
+G G+F V K GL + ++ R G ++ EV L IQH N++T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 67 LLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXXXXXXXXX 125
L + LI E + G + L ++ ++ EF ++
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--------LNGVYYL 130
Query: 126 XXPRVVHKDFKTANVLVDEDFIA----KVADAGLRNFLGRTDVAGPSSQVTADEIFLASE 181
++ H D K N+++ + + K+ D GL + + D + F+A E
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPEFVAPE 187
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVSG 207
+ + ++D++S GV L+SG
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 69/172 (40%), Gaps = 16/172 (9%)
Query: 41 RPGAPTQEFIDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVS 100
R G ++ EV L IQH N++TL + LI E + G + L ++
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLT 112
Query: 101 RQK-LEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIA----KVADAGL 155
++ EF ++ ++ H D K N+++ + + K+ D GL
Sbjct: 113 EEEATEFLKQI--------LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 156 RNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ + D + F+A E+ + ++D++S GV L+SG
Sbjct: 165 AH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 81/206 (39%), Gaps = 26/206 (12%)
Query: 17 IGEGKFGEVYK------GLLQDGMLVAIKK----RPGAPTQEFIDEVCFLASIQHRNLVT 66
+G G+F V K GL + ++ R G ++ EV L IQH N++T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 67 LLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKL-EFKHRLSIXXXXXXXXXXXXX 125
L + LI E + G + L ++ ++ EF ++
Sbjct: 79 LHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQI--------LNGVYYL 130
Query: 126 XXPRVVHKDFKTANVLVDEDFIA----KVADAGLRNFLGRTDVAGPSSQVTADEIFLASE 181
++ H D K N+++ + + K+ D GL + + D + F+A E
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPEFVAPE 187
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVSG 207
+ + ++D++S GV L+SG
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 21/98 (21%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLR------------NFLGRTDVAGPSSQVTADEIF 177
++H+D K AN L+++D KV D GL N L + GP ++ ++
Sbjct: 150 IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLT 209
Query: 178 LASEVKEFR---------RFSEKSDVYSFGVFLLELVS 206
+ +R +++ D++S G EL++
Sbjct: 210 SHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 85/213 (39%), Gaps = 25/213 (11%)
Query: 11 FSDKNLIGEGKFGEVYKGLLQD-GMLVAIKKRPGAPT--QEFIDEVCFLASIQHRNLVTL 67
F + + G+G FG V G + GM VAIKK P + + LA + H N+V L
Sbjct: 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQL 84
Query: 68 LGYC-------QENNLQFLIYEYIPNGSVSIHL----YGPSQVSRQKLEFKHRLSIXXXX 116
Y + + ++ EY+P+ ++H Y QV+ + K
Sbjct: 85 QSYFYTLGERDRRDIYLNVVMEYVPD---TLHRCCRNYYRRQVAPPPILIK---VFLFQL 138
Query: 117 XXXXXXXXXXXPRVVHKDFKTANVLVDE-DFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
V H+D K NVLV+E D K+ D G L ++ P+
Sbjct: 139 IRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSE---PNVAYICSR 195
Query: 176 IFLASE-VKEFRRFSEKSDVYSFGVFLLELVSG 207
+ A E + + ++ D++S G E++ G
Sbjct: 196 YYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 10/80 (12%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDV----AGPSSQVTADEIFLASEVKEF 185
++H+D K N+++ EDF K+ D G +L R + G + + A E+ + + +
Sbjct: 151 IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCG-TIEYCAPEVLMGNPYR-- 207
Query: 186 RRFSEKSDVYSFGVFLLELV 205
+ +++S GV L LV
Sbjct: 208 ---GPELEMWSLGVTLYTLV 224
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGL 155
++H+D K AN LV++D KV D GL
Sbjct: 177 ILHRDLKPANCLVNQDCSVKVCDFGL 202
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 93/221 (42%), Gaps = 23/221 (10%)
Query: 1 MEELSLATKNFSDKNLIGEGKFGEVYKGLLQDG-MLVAIK--------KRPGAPTQEFID 51
++E+ L ++F +IG G FGEV +++ + A+K KR A T F +
Sbjct: 66 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKR--AETACFRE 123
Query: 52 EVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLS 111
E L + + + L Q+ N +L+ +Y G + L S+ + E R
Sbjct: 124 ERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLL---SKFEDKLPEDMARFY 180
Query: 112 IXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAG---LRNFLG--RTDVAG 166
I VH+D K NVL+D + ++AD G N G ++ VA
Sbjct: 181 IGEMVLAIDSIHQL---HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV 237
Query: 167 PSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ + EI A E ++ + D +S GV + E++ G
Sbjct: 238 GTPDYISPEILQAME-DGMGKYGPECDWWSLGVCMYEMLYG 277
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 32.0 bits (71), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 93/221 (42%), Gaps = 23/221 (10%)
Query: 1 MEELSLATKNFSDKNLIGEGKFGEVYKGLLQDG-MLVAIK--------KRPGAPTQEFID 51
++E+ L ++F +IG G FGEV +++ + A+K KR A T F +
Sbjct: 82 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKR--AETACFRE 139
Query: 52 EVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLS 111
E L + + + L Q+ N +L+ +Y G + L S+ + E R
Sbjct: 140 ERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLL---SKFEDKLPEDMARFY 196
Query: 112 IXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAG---LRNFLG--RTDVAG 166
I VH+D K NVL+D + ++AD G N G ++ VA
Sbjct: 197 IGEMVLAIDSIHQL---HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV 253
Query: 167 PSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ + EI A E ++ + D +S GV + E++ G
Sbjct: 254 GTPDYISPEILQAME-DGMGKYGPECDWWSLGVCMYEMLYG 293
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 32.0 bits (71), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 13/88 (14%)
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTAD--------EIFLASEV 182
VH+ K +++L+ D KV +GLR+ L G +V D +L+ EV
Sbjct: 150 VHRSVKASHILISVD--GKVYLSGLRSNLSMIS-HGQRQRVVHDFPKYSVKVLPWLSPEV 206
Query: 183 --KEFRRFSEKSDVYSFGVFLLELVSGR 208
+ + + KSD+YS G+ EL +G
Sbjct: 207 LQQNLQGYDAKSDIYSVGITACELANGH 234
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 13/88 (14%)
Query: 131 VHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTAD--------EIFLASEV 182
VH+ K +++L+ D KV +GLR+ L G +V D +L+ EV
Sbjct: 134 VHRSVKASHILISVD--GKVYLSGLRSNLSMIS-HGQRQRVVHDFPKYSVKVLPWLSPEV 190
Query: 183 --KEFRRFSEKSDVYSFGVFLLELVSGR 208
+ + + KSD+YS G+ EL +G
Sbjct: 191 LQQNLQGYDAKSDIYSVGITACELANGH 218
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 58/152 (38%), Gaps = 9/152 (5%)
Query: 56 LASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXX 115
L +++H LV L Q + + + +YI G + HL Q R LE + R
Sbjct: 93 LKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHL----QRERCFLEPRARFYAAEI 148
Query: 116 XXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADE 175
+V++D K N+L+D + D GL + +S
Sbjct: 149 ASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNSTTSTFCGTP 203
Query: 176 IFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+LA EV + + D + G L E++ G
Sbjct: 204 EYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 94/235 (40%), Gaps = 47/235 (20%)
Query: 1 MEELSLATKNFSDKNLIGEGKFGEV-YKGLLQDGMLVAIK--------KRPGAPTQEFID 51
++E+ L +F +IG G F EV + Q G + A+K KR F +
Sbjct: 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKR--GEVSCFRE 110
Query: 52 EVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHL--YG---PSQVSR----- 101
E L + R + L Q+ N +L+ EY G + L +G P++++R
Sbjct: 111 ERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAE 170
Query: 102 --QKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAG----L 155
++ HRL VH+D K N+L+D ++AD G L
Sbjct: 171 IVMAIDSVHRLGY------------------VHRDIKPDNILLDRCGHIRLADFGSCLKL 212
Query: 156 R-NFLGRTDVAGPSSQVTADEIFLA-SEVKEFRRFSEKSDVYSFGVFLLELVSGR 208
R + R+ VA + + EI A + + D ++ GVF E+ G+
Sbjct: 213 RADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQ 267
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 31.2 bits (69), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGL 155
++H+D K AN L+++D K+ D GL
Sbjct: 152 IIHRDLKPANCLLNQDCSVKICDFGL 177
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/208 (19%), Positives = 84/208 (40%), Gaps = 23/208 (11%)
Query: 17 IGEGKFGEVY---KGLLQDGMLVAIKKRPGAP-TQEFIDEVCFLASIQHRNLVTL--LGY 70
+G G +G VY + +D A+K+ G + E+ L ++H N+++L +
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFL 88
Query: 71 CQENNLQFLIYEYIPNGSVS-IHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPR 129
+ +L+++Y + I + S+ +++ ++ +
Sbjct: 89 SHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW 148
Query: 130 VVHKDFKTANVLV----DEDFIAKVADAGLRNF-------LGRTDVAGPSSQVTADEIFL 178
V+H+D K AN+LV E K+AD G L D + A E+ L
Sbjct: 149 VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLL 208
Query: 179 ASEVKEFRRFSEKSDVYSFGVFLLELVS 206
+ R +++ D+++ G EL++
Sbjct: 209 GA-----RHYTKAIDIWAIGCIFAELLT 231
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 14/86 (16%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFL--------GRTDVAGPSSQVTADEIFLASE 181
+VHKD K N+L+ K++ G+ L RT P+ Q +A+
Sbjct: 130 IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPE----IANG 185
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVSG 207
+ F F K D++S GV L + +G
Sbjct: 186 LDTFSGF--KVDIWSAGVTLYNITTG 209
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 61/158 (38%), Gaps = 11/158 (6%)
Query: 52 EVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLS 111
E+ ++ ++H LV L +++N +IYE++ G + +V+ + + +
Sbjct: 204 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELF------EKVADEHNKMSEDEA 257
Query: 112 IXXXXXXXXXXXXXXXPRVVHKDFKTANVL--VDEDFIAKVADAGLRNFLGRTDVAGPSS 169
+ VH D K N++ K+ D GL L D
Sbjct: 258 VEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL---DPKQSVK 314
Query: 170 QVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
T F A EV E + +D++S GV L+SG
Sbjct: 315 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 61/158 (38%), Gaps = 11/158 (6%)
Query: 52 EVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLS 111
E+ ++ ++H LV L +++N +IYE++ G + +V+ + + +
Sbjct: 98 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELF------EKVADEHNKMSEDEA 151
Query: 112 IXXXXXXXXXXXXXXXPRVVHKDFKTANVL--VDEDFIAKVADAGLRNFLGRTDVAGPSS 169
+ VH D K N++ K+ D GL L D
Sbjct: 152 VEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL---DPKQSVK 208
Query: 170 QVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
T F A EV E + +D++S GV L+SG
Sbjct: 209 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/87 (20%), Positives = 40/87 (45%), Gaps = 13/87 (14%)
Query: 130 VVHKDFKTANVLVD-EDFIAKVADAGLRNFL-------GRTDVAGPSSQVTADEIFLASE 181
V+H+D K AN+ ++ ED + K+ D GL + G + + + L+
Sbjct: 141 VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSP- 199
Query: 182 VKEFRRFSEKSDVYSFGVFLLELVSGR 208
+++ D+++ G E+++G+
Sbjct: 200 ----NNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 59/156 (37%), Gaps = 20/156 (12%)
Query: 14 KNLIGEGKFGEVYKGL-LQDGMLVAIKK---RPGAPTQEFIDEVCFLASIQ-HRNLVTLL 68
+ ++ EG F VY+ + G A+K+ + I EVCF+ + H N+V
Sbjct: 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQ-- 90
Query: 69 GYCQENNL----------QFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXX 118
+C ++ +FL+ + G + L SR L L I
Sbjct: 91 -FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFL--KKMESRGPLSCDTVLKIFYQTCR 147
Query: 119 XXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAG 154
P ++H+D K N+L+ K+ D G
Sbjct: 148 AVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFG 183
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 38/208 (18%), Positives = 81/208 (38%), Gaps = 30/208 (14%)
Query: 16 LIGEGKFGEVYK---------------GLLQDGMLVAIKKRPGAPTQEFIDEVCFLASIQ 60
++G+G +G+V++ +L+ M+V R T E L ++
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIV----RNAKDTAHTKAERNILEEVK 79
Query: 61 HRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXX 120
H +V L+ Q +LI EY+ G + + Q+ R+ + F +
Sbjct: 80 HPFIVDLIYAFQTGGKLYLILEYLSGGELFM------QLEREGI-FMEDTACFYLAEISM 132
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI-FLA 179
++++D K N++++ K+ D GL + G + I ++A
Sbjct: 133 ALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGL---CKESIHDGTVTHTFCGTIEYMA 189
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSG 207
E+ + D +S G + ++++G
Sbjct: 190 PEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 64/171 (37%), Gaps = 14/171 (8%)
Query: 41 RPGAPTQEFIDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVS 100
R G +E EV L + H N++TL + LI E + G + L +S
Sbjct: 54 RRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLS 113
Query: 101 RQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIA----KVADAGLR 156
++ + ++ H D K N+++ + I K+ D GL
Sbjct: 114 EEE-------ATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
Query: 157 NFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ + + F+A E+ + ++D++S GV L+SG
Sbjct: 167 H---EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 64/171 (37%), Gaps = 14/171 (8%)
Query: 41 RPGAPTQEFIDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVS 100
R G +E EV L + H N++TL + LI E + G + L +S
Sbjct: 54 RRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLS 113
Query: 101 RQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIA----KVADAGLR 156
++ + ++ H D K N+++ + I K+ D GL
Sbjct: 114 EEE-------ATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
Query: 157 NFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ + + F+A E+ + ++D++S GV L+SG
Sbjct: 167 H---EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 64/171 (37%), Gaps = 14/171 (8%)
Query: 41 RPGAPTQEFIDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVS 100
R G +E EV L + H N++TL + LI E + G + L +S
Sbjct: 54 RRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLS 113
Query: 101 RQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIA----KVADAGLR 156
++ + ++ H D K N+++ + I K+ D GL
Sbjct: 114 EEE-------ATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
Query: 157 NFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ + + F+A E+ + ++D++S GV L+SG
Sbjct: 167 H---EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 28.5 bits (62), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 64/171 (37%), Gaps = 14/171 (8%)
Query: 41 RPGAPTQEFIDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVS 100
R G +E EV L + H N++TL + LI E + G + L +S
Sbjct: 54 RRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLS 113
Query: 101 RQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIA----KVADAGLR 156
++ + ++ H D K N+++ + I K+ D GL
Sbjct: 114 EEE-------ATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
Query: 157 NFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ + + F+A E+ + ++D++S GV L+SG
Sbjct: 167 H---EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 28.5 bits (62), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 64/171 (37%), Gaps = 14/171 (8%)
Query: 41 RPGAPTQEFIDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVS 100
R G +E EV L + H N++TL + LI E + G + L +S
Sbjct: 54 RRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLS 113
Query: 101 RQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIA----KVADAGLR 156
++ + ++ H D K N+++ + I K+ D GL
Sbjct: 114 EEE-------ATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
Query: 157 NFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSG 207
+ + + F+A E+ + ++D++S GV L+SG
Sbjct: 167 H---EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 38/208 (18%), Positives = 81/208 (38%), Gaps = 30/208 (14%)
Query: 16 LIGEGKFGEVYK---------------GLLQDGMLVAIKKRPGAPTQEFIDEVCFLASIQ 60
++G+G +G+V++ +L+ M+V R T E L ++
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIV----RNAKDTAHTKAERNILEEVK 79
Query: 61 HRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXX 120
H +V L+ Q +LI EY+ G + + Q+ R+ + F +
Sbjct: 80 HPFIVDLIYAFQTGGKLYLILEYLSGGELFM------QLEREGI-FMEDTACFYLAEISM 132
Query: 121 XXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI-FLA 179
++++D K N++++ K+ D GL + G + I ++A
Sbjct: 133 ALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGL---CKESIHDGTVTHXFCGTIEYMA 189
Query: 180 SEVKEFRRFSEKSDVYSFGVFLLELVSG 207
E+ + D +S G + ++++G
Sbjct: 190 PEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 34/172 (19%), Positives = 68/172 (39%), Gaps = 28/172 (16%)
Query: 44 APTQEFIDEVCFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSV------------SI 91
+ +F +E+ + I++ +T G + ++IYEY+ N S+ +
Sbjct: 85 SKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY 144
Query: 92 HLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVA 151
+ P QV + + H+D K +N+L+D++ K++
Sbjct: 145 TCFIPIQV----------IKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLS 194
Query: 152 DAGLRNFLGRTDVAGPSSQVTADEIFLASEV--KEFRRFSEKSDVYSFGVFL 201
D G ++ + G S+ T + F+ E E K D++S G+ L
Sbjct: 195 DFGESEYMVDKKIKG--SRGTYE--FMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 28.5 bits (62), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 12/90 (13%)
Query: 130 VVHKDFKTANVLVDEDFIAKVADAGLRNFL-GRTDVAGPSSQVTADEIFLASEVKEFRRF 188
+VH D K AN L+ D + K+ D G+ N + T SQV A +K+
Sbjct: 176 IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSS 234
Query: 189 SEKS----------DVYSFGVFLLELVSGR 208
E DV+S G L + G+
Sbjct: 235 RENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 28.1 bits (61), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 27/106 (25%)
Query: 129 RVVHKDFKTANVLVD--------------------EDF-IAKVADAGLRNFLGRTDVAGP 167
+++H+D K N+LV DF + K D+G +F RT++ P
Sbjct: 135 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSF--RTNLNNP 192
Query: 168 S--SQVTADEIFLAS-EVKEFRRFSEKSDVYSFG-VFLLELVSGRE 209
S S A E+ S ++ RR + D++S G VF L G+
Sbjct: 193 SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH 238
>pdb|3NM1|A Chain A, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NM1|B Chain B, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NM1|C Chain C, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NM1|D Chain D, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NM1|E Chain E, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NM1|F Chain F, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
Length = 540
Score = 28.1 bits (61), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 12 SDKNLIGEGK--FGEVYKGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASIQHRNLVTLL 68
+D +I EGK +G+V GL LV I+++ A T+ FI+E + + H + V L+
Sbjct: 16 TDSGMIPEGKTLYGQVEAGLQNGVTLVQIREKD-ADTKFFIEEALQIKELCHAHNVPLI 73
>pdb|3NL2|A Chain A, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NL2|B Chain B, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NL2|C Chain C, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NL2|D Chain D, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NL2|E Chain E, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NL2|F Chain F, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NL3|A Chain A, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NL3|B Chain B, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NL3|C Chain C, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NL3|D Chain D, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NL3|E Chain E, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NL3|F Chain F, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NL5|A Chain A, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NL5|B Chain B, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NL5|C Chain C, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NL6|A Chain A, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NL6|B Chain B, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NL6|C Chain C, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NM3|A Chain A, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NM3|B Chain B, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NM3|C Chain C, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NM3|D Chain D, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NM3|E Chain E, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
pdb|3NM3|F Chain F, The Crystal Structure Of Candida Glabrata Thi6, A
Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of
Eukaryotes
Length = 540
Score = 28.1 bits (61), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 12 SDKNLIGEGK--FGEVYKGLLQDGMLVAIKKRPGAPTQEFIDEVCFLASIQHRNLVTLL 68
+D +I EGK +G+V GL LV I+++ A T+ FI+E + + H + V L+
Sbjct: 16 TDSGMIPEGKTLYGQVEAGLQNGVTLVQIREKD-ADTKFFIEEALQIKELCHAHNVPLI 73
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 27.3 bits (59), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Query: 130 VVHKDFKTANVLVDEDFIA-KVADAGLRNFLGRTDVAGPSSQV-TADEIFLASE-VKEFR 186
++H+D K NVL+D + ++ D GL F G V A F E + +++
Sbjct: 152 IMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYH----PGQEYNVRVASRYFKGPELLVDYQ 207
Query: 187 RFSEKSDVYSFGVFLLELVSGRE 209
+ D++S G L ++ +E
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKE 230
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,003,471
Number of Sequences: 62578
Number of extensions: 290535
Number of successful extensions: 3071
Number of sequences better than 100.0: 970
Number of HSP's better than 100.0 without gapping: 623
Number of HSP's successfully gapped in prelim test: 347
Number of HSP's that attempted gapping in prelim test: 1024
Number of HSP's gapped (non-prelim): 1224
length of query: 312
length of database: 14,973,337
effective HSP length: 99
effective length of query: 213
effective length of database: 8,778,115
effective search space: 1869738495
effective search space used: 1869738495
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)