Query 021424
Match_columns 312
No_of_seqs 104 out of 1804
Neff 10.1
Searched_HMMs 46136
Date Fri Mar 29 02:50:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021424.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021424hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4178 Soluble epoxide hydrol 100.0 1.5E-45 3.2E-50 306.5 24.5 292 3-311 21-320 (322)
2 PLN02824 hydrolase, alpha/beta 100.0 1.5E-39 3.2E-44 281.6 21.9 279 3-311 7-294 (294)
3 PRK03592 haloalkane dehalogena 100.0 5.6E-38 1.2E-42 271.8 25.5 269 4-310 7-288 (295)
4 PRK00870 haloalkane dehalogena 100.0 1E-37 2.2E-42 271.0 25.3 274 4-311 19-301 (302)
5 PLN02679 hydrolase, alpha/beta 100.0 2.3E-37 4.9E-42 274.4 23.7 279 7-310 64-356 (360)
6 PRK03204 haloalkane dehalogena 100.0 6.3E-37 1.4E-41 263.7 20.1 271 4-308 14-285 (286)
7 TIGR02240 PHA_depoly_arom poly 100.0 1.5E-36 3.3E-41 260.4 18.9 260 5-310 3-265 (276)
8 TIGR03343 biphenyl_bphD 2-hydr 100.0 2.5E-35 5.4E-40 253.6 23.9 269 4-310 5-282 (282)
9 PLN02965 Probable pheophorbida 100.0 4.1E-35 8.9E-40 248.6 18.7 245 27-310 5-252 (255)
10 PLN03087 BODYGUARD 1 domain co 100.0 1.2E-34 2.6E-39 261.1 21.3 126 3-129 175-309 (481)
11 PRK10349 carboxylesterase BioH 100.0 1.2E-34 2.5E-39 246.0 19.3 252 15-309 3-254 (256)
12 PLN02578 hydrolase 100.0 4.7E-34 1E-38 252.9 22.6 118 7-128 69-186 (354)
13 PLN03084 alpha/beta hydrolase 100.0 6.5E-34 1.4E-38 251.7 23.2 121 8-129 109-232 (383)
14 TIGR03056 bchO_mg_che_rel puta 100.0 6.8E-34 1.5E-38 243.8 22.2 269 6-309 8-278 (278)
15 PRK06489 hypothetical protein; 100.0 1.5E-34 3.2E-39 256.8 18.6 118 11-128 47-188 (360)
16 PRK10673 acyl-CoA esterase; Pr 100.0 6.5E-34 1.4E-38 241.1 20.5 249 15-311 2-255 (255)
17 PRK11126 2-succinyl-6-hydroxy- 100.0 1.6E-32 3.5E-37 230.9 21.3 99 25-128 2-101 (242)
18 PRK08775 homoserine O-acetyltr 100.0 2.6E-33 5.6E-38 247.3 15.0 118 7-128 39-172 (343)
19 KOG1454 Predicted hydrolase/ac 100.0 1.5E-32 3.3E-37 237.9 16.9 256 24-311 57-324 (326)
20 TIGR01250 pro_imino_pep_2 prol 100.0 1.4E-31 3E-36 229.9 21.5 121 8-128 6-130 (288)
21 TIGR03611 RutD pyrimidine util 100.0 6.7E-32 1.4E-36 228.3 19.0 252 16-310 1-257 (257)
22 PRK10749 lysophospholipase L2; 100.0 6.7E-31 1.4E-35 230.7 23.1 122 7-128 34-165 (330)
23 PLN02385 hydrolase; alpha/beta 100.0 2.9E-31 6.3E-36 234.9 20.5 120 8-128 66-196 (349)
24 PRK07581 hypothetical protein; 100.0 5.3E-32 1.2E-36 238.9 15.3 118 11-128 23-158 (339)
25 PLN02211 methyl indole-3-aceta 100.0 2.1E-30 4.5E-35 221.3 22.8 118 10-128 3-121 (273)
26 TIGR02427 protocat_pcaD 3-oxoa 100.0 6.3E-31 1.4E-35 220.9 19.3 249 15-309 1-251 (251)
27 PHA02857 monoglyceride lipase; 100.0 6.9E-30 1.5E-34 219.1 25.6 120 8-128 5-131 (276)
28 TIGR01738 bioH putative pimelo 100.0 1.1E-30 2.3E-35 218.9 18.7 241 26-308 5-245 (245)
29 TIGR01392 homoserO_Ac_trn homo 100.0 2.5E-31 5.4E-36 235.4 15.0 119 11-129 13-162 (351)
30 KOG4409 Predicted hydrolase/ac 100.0 5.2E-30 1.1E-34 214.2 21.5 126 6-132 67-198 (365)
31 PRK00175 metX homoserine O-ace 100.0 1E-30 2.2E-35 233.4 17.7 119 11-129 30-182 (379)
32 TIGR03695 menH_SHCHC 2-succiny 100.0 7.9E-30 1.7E-34 213.9 18.4 103 25-128 1-104 (251)
33 PRK14875 acetoin dehydrogenase 100.0 1.6E-29 3.4E-34 225.9 20.2 259 7-311 112-371 (371)
34 PLN02298 hydrolase, alpha/beta 100.0 6.6E-29 1.4E-33 218.4 23.4 120 8-128 37-168 (330)
35 PLN02894 hydrolase, alpha/beta 100.0 5.5E-29 1.2E-33 223.2 22.5 113 15-129 93-211 (402)
36 PRK05855 short chain dehydroge 100.0 3.7E-29 8.1E-34 236.2 21.4 122 4-126 3-128 (582)
37 PF12697 Abhydrolase_6: Alpha/ 100.0 1.8E-30 3.8E-35 214.7 10.2 101 28-129 1-101 (228)
38 TIGR01249 pro_imino_pep_1 prol 100.0 2.4E-28 5.1E-33 212.5 21.6 125 4-129 4-130 (306)
39 KOG2984 Predicted hydrolase [G 100.0 5.3E-29 1.1E-33 191.6 13.8 243 6-311 23-276 (277)
40 PLN02980 2-oxoglutarate decarb 100.0 5.6E-28 1.2E-32 246.9 21.5 122 6-128 1346-1479(1655)
41 PLN02652 hydrolase; alpha/beta 100.0 4.5E-27 9.8E-32 209.4 21.4 115 12-128 119-244 (395)
42 COG2267 PldB Lysophospholipase 100.0 2.7E-26 5.8E-31 197.0 22.6 127 4-130 10-143 (298)
43 PLN02511 hydrolase 99.9 1.8E-26 4E-31 206.1 14.5 250 24-310 99-364 (388)
44 PRK06765 homoserine O-acetyltr 99.9 1.1E-24 2.3E-29 193.5 19.0 117 12-128 39-195 (389)
45 KOG2382 Predicted alpha/beta h 99.9 1.5E-24 3.3E-29 181.3 17.5 250 24-310 51-312 (315)
46 TIGR01607 PST-A Plasmodium sub 99.9 3E-24 6.6E-29 188.2 19.9 121 8-128 2-184 (332)
47 COG1647 Esterase/lipase [Gener 99.9 1.3E-24 2.8E-29 170.4 15.3 225 25-310 15-243 (243)
48 TIGR03100 hydr1_PEP hydrolase, 99.9 6.9E-23 1.5E-27 175.2 21.0 115 9-128 7-133 (274)
49 KOG1455 Lysophospholipase [Lip 99.9 3.3E-22 7.1E-27 164.7 17.2 121 7-128 31-163 (313)
50 PRK05077 frsA fermentation/res 99.9 1.4E-21 3.1E-26 175.5 23.0 215 25-311 194-412 (414)
51 PRK10985 putative hydrolase; P 99.9 5.1E-22 1.1E-26 174.0 18.9 106 24-130 57-169 (324)
52 PLN02872 triacylglycerol lipas 99.9 3.3E-22 7.3E-27 177.5 17.5 123 5-128 45-196 (395)
53 TIGR01838 PHA_synth_I poly(R)- 99.9 4.4E-22 9.5E-27 181.5 15.4 107 24-130 187-303 (532)
54 COG0596 MhpC Predicted hydrola 99.9 1.2E-20 2.6E-25 158.7 22.8 116 10-129 6-123 (282)
55 KOG2564 Predicted acetyltransf 99.9 1.8E-21 3.9E-26 157.5 15.8 112 15-128 61-181 (343)
56 PRK10566 esterase; Provisional 99.9 8.5E-21 1.8E-25 160.3 19.3 109 16-126 15-139 (249)
57 PRK11071 esterase YqiA; Provis 99.9 6E-21 1.3E-25 153.8 17.5 87 26-128 2-92 (190)
58 PF00561 Abhydrolase_1: alpha/ 99.9 1.1E-22 2.3E-27 169.2 3.0 76 53-128 1-78 (230)
59 TIGR01836 PHA_synth_III_C poly 99.9 4.4E-20 9.6E-25 163.5 19.3 101 25-130 62-172 (350)
60 PRK07868 acyl-CoA synthetase; 99.8 9.5E-20 2.1E-24 180.9 18.9 103 24-129 66-177 (994)
61 PRK13604 luxD acyl transferase 99.8 5.2E-19 1.1E-23 149.7 19.3 118 6-127 11-139 (307)
62 KOG2565 Predicted hydrolases o 99.8 2E-19 4.3E-24 151.0 13.5 128 2-130 122-265 (469)
63 TIGR03101 hydr2_PEP hydrolase, 99.8 3.7E-19 8E-24 149.7 15.0 102 25-128 25-133 (266)
64 PF12695 Abhydrolase_5: Alpha/ 99.8 1.6E-17 3.4E-22 128.3 13.4 93 27-127 1-93 (145)
65 TIGR03230 lipo_lipase lipoprot 99.7 4.1E-17 8.8E-22 145.2 12.8 104 23-128 39-153 (442)
66 PRK11460 putative hydrolase; P 99.7 2.3E-16 4.9E-21 131.4 16.6 179 24-310 15-211 (232)
67 PLN02442 S-formylglutathione h 99.7 5.8E-16 1.3E-20 132.9 18.1 105 24-128 46-177 (283)
68 TIGR02821 fghA_ester_D S-formy 99.7 2.7E-15 5.8E-20 128.4 20.5 105 24-128 41-172 (275)
69 PF06342 DUF1057: Alpha/beta h 99.7 5.2E-15 1.1E-19 121.5 20.9 113 15-130 22-138 (297)
70 cd00707 Pancreat_lipase_like P 99.7 8.8E-17 1.9E-21 137.0 8.3 114 13-128 24-146 (275)
71 PLN00021 chlorophyllase 99.7 4.2E-15 9.1E-20 128.5 17.4 102 24-127 51-164 (313)
72 COG1506 DAP2 Dipeptidyl aminop 99.7 5.2E-15 1.1E-19 139.9 18.4 230 6-311 367-616 (620)
73 KOG4667 Predicted esterase [Li 99.7 5.4E-15 1.2E-19 115.8 14.9 105 20-128 29-138 (269)
74 TIGR03502 lipase_Pla1_cef extr 99.6 1.2E-15 2.7E-20 143.6 12.4 109 7-115 421-576 (792)
75 KOG2931 Differentiation-relate 99.6 1.2E-13 2.7E-18 113.3 21.2 260 15-309 33-304 (326)
76 COG2021 MET2 Homoserine acetyl 99.6 1.7E-14 3.7E-19 122.9 16.7 118 11-128 33-181 (368)
77 PF00326 Peptidase_S9: Prolyl 99.6 5.6E-15 1.2E-19 121.8 12.5 196 43-311 5-209 (213)
78 PF03096 Ndr: Ndr family; Int 99.6 6.2E-14 1.3E-18 116.7 16.2 264 8-310 3-278 (283)
79 KOG1552 Predicted alpha/beta h 99.6 1.5E-13 3.2E-18 111.6 18.0 108 12-126 44-160 (258)
80 COG3208 GrsT Predicted thioest 99.6 5.9E-14 1.3E-18 113.2 13.4 224 24-309 6-234 (244)
81 PF12146 Hydrolase_4: Putative 99.6 2.8E-14 6E-19 97.2 9.0 76 13-89 1-79 (79)
82 KOG4391 Predicted alpha/beta h 99.5 6.1E-14 1.3E-18 110.1 11.0 118 5-127 53-182 (300)
83 COG0429 Predicted hydrolase of 99.5 2.1E-12 4.5E-17 108.6 19.7 112 12-125 59-181 (345)
84 PF01738 DLH: Dienelactone hyd 99.5 2.2E-13 4.7E-18 112.7 11.0 182 24-311 13-217 (218)
85 TIGR01839 PHA_synth_II poly(R) 99.5 3.2E-12 6.9E-17 116.2 18.3 102 24-130 214-329 (560)
86 TIGR01840 esterase_phb esteras 99.5 7.1E-13 1.5E-17 109.1 12.3 105 24-128 12-129 (212)
87 PRK10162 acetyl esterase; Prov 99.5 1.9E-11 4E-16 106.8 21.2 102 24-127 80-193 (318)
88 TIGR00976 /NonD putative hydro 99.5 2.2E-13 4.8E-18 127.5 9.8 114 12-128 5-131 (550)
89 KOG1838 Alpha/beta hydrolase [ 99.5 6.4E-12 1.4E-16 109.3 17.9 92 24-117 124-221 (409)
90 PF02230 Abhydrolase_2: Phosph 99.5 1E-12 2.2E-17 108.4 12.5 182 23-311 12-215 (216)
91 TIGR01849 PHB_depoly_PhaZ poly 99.4 4.1E-11 8.9E-16 106.0 18.2 102 26-131 103-210 (406)
92 COG0412 Dienelactone hydrolase 99.3 9.7E-11 2.1E-15 97.4 17.2 99 26-125 28-142 (236)
93 PF07819 PGAP1: PGAP1-like pro 99.3 2E-11 4.2E-16 100.8 11.7 102 24-130 3-124 (225)
94 PF06821 Ser_hydrolase: Serine 99.3 3.4E-11 7.4E-16 94.9 11.5 88 28-128 1-90 (171)
95 PLN02733 phosphatidylcholine-s 99.3 2.4E-11 5.3E-16 109.1 10.6 121 7-130 71-202 (440)
96 PF05448 AXE1: Acetyl xylan es 99.3 3.3E-10 7.2E-15 98.3 16.9 113 12-126 65-206 (320)
97 PF00975 Thioesterase: Thioest 99.3 4.8E-11 1E-15 99.4 10.8 99 26-128 1-103 (229)
98 COG0400 Predicted esterase [Ge 99.3 1.6E-10 3.5E-15 93.3 13.3 98 24-126 17-131 (207)
99 PF05728 UPF0227: Uncharacteri 99.2 2.2E-09 4.7E-14 85.7 18.1 87 28-130 2-92 (187)
100 PRK10252 entF enterobactin syn 99.2 7.4E-11 1.6E-15 121.7 11.8 99 24-127 1067-1169(1296)
101 PRK10115 protease 2; Provision 99.2 1.1E-09 2.4E-14 104.7 18.6 117 11-127 424-557 (686)
102 PF10230 DUF2305: Uncharacteri 99.2 3.7E-10 8E-15 95.8 12.8 104 25-128 2-121 (266)
103 PF02273 Acyl_transf_2: Acyl t 99.1 1.6E-09 3.5E-14 87.1 13.2 115 7-125 5-130 (294)
104 PF12740 Chlorophyllase2: Chlo 99.1 6.3E-10 1.4E-14 92.1 10.6 111 16-128 8-130 (259)
105 COG3571 Predicted hydrolase of 99.1 4.9E-09 1.1E-13 78.8 14.0 104 27-131 16-126 (213)
106 COG2945 Predicted hydrolase of 99.1 6.8E-09 1.5E-13 80.6 15.2 89 24-117 27-126 (210)
107 PF06028 DUF915: Alpha/beta hy 99.1 6.2E-09 1.3E-13 87.0 16.0 107 24-130 10-144 (255)
108 COG3458 Acetyl esterase (deace 99.1 3.4E-09 7.5E-14 86.5 12.8 113 11-125 64-206 (321)
109 PF08538 DUF1749: Protein of u 99.0 1.4E-09 2.9E-14 91.8 9.2 107 14-129 21-148 (303)
110 PF06500 DUF1100: Alpha/beta h 99.0 2.4E-09 5.2E-14 94.1 8.4 103 25-129 189-296 (411)
111 COG3243 PhaC Poly(3-hydroxyalk 98.9 3.5E-09 7.6E-14 92.0 8.9 105 25-129 107-217 (445)
112 COG4757 Predicted alpha/beta h 98.9 1.3E-08 2.8E-13 81.3 11.3 113 12-126 14-135 (281)
113 PF01674 Lipase_2: Lipase (cla 98.9 2.4E-09 5.1E-14 87.3 6.8 89 26-115 2-96 (219)
114 PRK05371 x-prolyl-dipeptidyl a 98.9 1.4E-08 3.1E-13 97.9 13.3 81 44-127 271-371 (767)
115 COG3319 Thioesterase domains o 98.9 1.9E-08 4.2E-13 83.8 11.4 100 26-130 1-104 (257)
116 PF07224 Chlorophyllase: Chlor 98.9 1.3E-08 2.8E-13 82.9 8.4 103 24-128 45-156 (307)
117 PF03403 PAF-AH_p_II: Platelet 98.9 1.2E-08 2.6E-13 90.7 9.1 103 25-128 100-261 (379)
118 KOG2624 Triglyceride lipase-ch 98.8 1.9E-07 4E-12 82.8 15.7 123 8-130 53-200 (403)
119 PF09752 DUF2048: Uncharacteri 98.8 7.1E-07 1.5E-11 76.7 18.2 240 24-309 91-347 (348)
120 PF00151 Lipase: Lipase; Inte 98.8 3.7E-09 8E-14 92.1 4.3 104 24-129 70-187 (331)
121 PTZ00472 serine carboxypeptida 98.8 4.2E-08 9.1E-13 89.6 10.9 122 7-128 50-215 (462)
122 COG4188 Predicted dienelactone 98.8 3.5E-08 7.6E-13 84.9 9.1 96 25-120 71-185 (365)
123 PRK04940 hypothetical protein; 98.8 2.6E-07 5.7E-12 72.4 13.1 86 28-130 2-93 (180)
124 PF06057 VirJ: Bacterial virul 98.7 2E-06 4.4E-11 67.7 16.9 94 27-128 4-106 (192)
125 KOG2100 Dipeptidyl aminopeptid 98.7 6E-07 1.3E-11 86.6 16.0 122 5-128 499-643 (755)
126 smart00824 PKS_TE Thioesterase 98.7 1.9E-07 4.2E-12 76.1 10.9 94 30-128 2-101 (212)
127 PF08840 BAAT_C: BAAT / Acyl-C 98.7 6.5E-08 1.4E-12 79.4 7.7 50 79-129 4-56 (213)
128 PF05990 DUF900: Alpha/beta hy 98.7 1.5E-07 3.2E-12 78.3 9.4 103 24-127 17-135 (233)
129 PF05057 DUF676: Putative seri 98.7 1E-07 2.2E-12 78.5 8.0 86 25-113 4-97 (217)
130 PF12715 Abhydrolase_7: Abhydr 98.6 2E-07 4.3E-12 80.9 9.8 101 25-126 115-257 (390)
131 COG3545 Predicted esterase of 98.6 1.4E-06 3E-11 67.1 13.0 90 26-128 3-93 (181)
132 PF02129 Peptidase_S15: X-Pro 98.6 1.9E-07 4.1E-12 79.9 8.6 113 12-127 1-134 (272)
133 KOG3043 Predicted hydrolase re 98.6 5.9E-07 1.3E-11 71.7 9.7 114 8-125 22-150 (242)
134 COG1075 LipA Predicted acetylt 98.6 2.3E-07 4.9E-12 81.5 8.2 101 26-130 60-165 (336)
135 PF03959 FSH1: Serine hydrolas 98.6 2.8E-07 6.2E-12 75.7 8.2 91 24-115 3-123 (212)
136 COG3509 LpqC Poly(3-hydroxybut 98.5 1.4E-06 3.1E-11 72.6 11.5 123 6-128 37-178 (312)
137 PF10503 Esterase_phd: Esteras 98.5 1.2E-06 2.7E-11 71.6 11.1 103 25-127 16-130 (220)
138 COG4814 Uncharacterized protei 98.4 2.1E-06 4.4E-11 69.9 9.6 105 26-130 46-177 (288)
139 KOG2112 Lysophospholipase [Lip 98.4 4.9E-06 1.1E-10 66.0 11.3 96 26-124 4-123 (206)
140 PF07859 Abhydrolase_3: alpha/ 98.4 1E-06 2.2E-11 72.3 7.8 91 28-127 1-108 (211)
141 KOG1515 Arylacetamide deacetyl 98.4 9.7E-05 2.1E-09 64.4 19.5 99 25-128 90-206 (336)
142 KOG3975 Uncharacterized conser 98.4 1.2E-05 2.6E-10 65.3 12.6 124 4-127 1-145 (301)
143 KOG4627 Kynurenine formamidase 98.3 6.3E-06 1.4E-10 65.0 10.2 102 18-127 58-170 (270)
144 COG0657 Aes Esterase/lipase [L 98.3 0.00018 4E-09 62.7 20.5 99 24-127 78-189 (312)
145 PF05677 DUF818: Chlamydia CHL 98.3 1.2E-05 2.7E-10 68.6 12.4 104 8-116 116-237 (365)
146 PF00756 Esterase: Putative es 98.3 1.7E-06 3.6E-11 73.0 5.9 105 24-128 23-149 (251)
147 PF11339 DUF3141: Protein of u 98.2 8.1E-05 1.8E-09 66.9 15.7 77 45-129 94-175 (581)
148 PRK10439 enterobactin/ferric e 98.2 1.5E-05 3.2E-10 72.0 10.5 102 25-128 209-322 (411)
149 KOG2551 Phospholipase/carboxyh 98.2 5.4E-05 1.2E-09 60.6 12.4 58 243-309 161-218 (230)
150 COG4099 Predicted peptidase [G 98.2 2.6E-05 5.7E-10 65.0 10.5 111 12-127 170-302 (387)
151 PF03583 LIP: Secretory lipase 98.2 1.5E-05 3.3E-10 68.6 9.6 71 44-114 18-91 (290)
152 PF06441 EHN: Epoxide hydrolas 98.1 4.4E-06 9.4E-11 60.6 4.7 45 1-45 65-112 (112)
153 KOG2281 Dipeptidyl aminopeptid 98.1 1.3E-05 2.8E-10 73.3 8.0 113 12-124 622-757 (867)
154 COG3150 Predicted esterase [Ge 98.1 1.6E-05 3.5E-10 60.6 7.1 86 28-124 2-87 (191)
155 PLN02606 palmitoyl-protein thi 98.0 4.5E-05 9.7E-10 64.6 8.5 101 24-130 25-133 (306)
156 COG4782 Uncharacterized protei 98.0 5.2E-05 1.1E-09 65.2 8.8 103 24-126 115-231 (377)
157 KOG1553 Predicted alpha/beta h 97.9 3.5E-05 7.6E-10 65.5 7.4 93 27-125 245-341 (517)
158 PF02450 LCAT: Lecithin:choles 97.9 6.9E-05 1.5E-09 67.3 9.8 109 11-130 37-161 (389)
159 KOG3253 Predicted alpha/beta h 97.9 0.00012 2.6E-09 66.7 10.9 94 24-126 175-283 (784)
160 PLN02633 palmitoyl protein thi 97.8 0.00017 3.6E-09 61.3 9.8 99 24-130 24-132 (314)
161 KOG3724 Negative regulator of 97.8 8.6E-05 1.9E-09 69.6 8.0 100 24-128 88-219 (973)
162 cd00312 Esterase_lipase Estera 97.8 0.00012 2.6E-09 68.2 8.8 103 24-128 94-212 (493)
163 PF05577 Peptidase_S28: Serine 97.7 0.00055 1.2E-08 62.7 12.2 107 24-130 28-149 (434)
164 PF02089 Palm_thioest: Palmito 97.7 4E-05 8.7E-10 64.4 4.2 104 25-130 5-117 (279)
165 PF05705 DUF829: Eukaryotic pr 97.6 0.0029 6.4E-08 52.9 14.6 64 243-308 176-240 (240)
166 COG0627 Predicted esterase [Ge 97.6 0.00029 6.2E-09 61.0 7.7 107 24-130 53-188 (316)
167 PF00450 Peptidase_S10: Serine 97.6 0.00066 1.4E-08 61.7 10.5 122 7-129 14-181 (415)
168 PF08386 Abhydrolase_4: TAP-li 97.5 0.0002 4.4E-09 51.4 5.4 60 245-310 34-93 (103)
169 cd00741 Lipase Lipase. Lipase 97.5 0.00036 7.8E-09 54.1 6.8 52 78-129 8-67 (153)
170 KOG3847 Phospholipase A2 (plat 97.5 0.00019 4.2E-09 60.4 5.4 107 24-131 117-277 (399)
171 KOG2369 Lecithin:cholesterol a 97.4 0.00018 4E-09 64.0 4.8 96 31-129 110-225 (473)
172 COG2936 Predicted acyl esteras 97.4 0.00054 1.2E-08 63.1 7.8 113 12-127 28-157 (563)
173 PF12048 DUF3530: Protein of u 97.4 0.0035 7.5E-08 54.5 12.5 102 27-128 89-228 (310)
174 KOG1551 Uncharacterized conser 97.4 0.0029 6.2E-08 52.3 11.0 56 248-310 309-365 (371)
175 KOG2541 Palmitoyl protein thio 97.3 0.0023 5.1E-08 52.9 9.8 99 26-129 24-128 (296)
176 PLN03016 sinapoylglucose-malat 97.3 0.0046 1E-07 56.3 12.0 65 245-310 347-430 (433)
177 COG1073 Hydrolases of the alph 97.2 0.0049 1.1E-07 52.7 11.3 65 243-311 229-297 (299)
178 PF01764 Lipase_3: Lipase (cla 97.2 0.001 2.2E-08 50.6 6.3 38 79-116 49-86 (140)
179 PF10142 PhoPQ_related: PhoPQ- 97.2 0.0083 1.8E-07 53.0 12.6 58 243-309 260-318 (367)
180 PLN02517 phosphatidylcholine-s 97.1 0.0016 3.4E-08 60.2 7.6 89 40-130 157-264 (642)
181 KOG3101 Esterase D [General fu 97.1 0.0007 1.5E-08 53.9 3.9 104 25-128 44-175 (283)
182 PLN02209 serine carboxypeptida 97.0 0.011 2.5E-07 53.8 12.0 65 245-310 351-434 (437)
183 KOG3967 Uncharacterized conser 96.9 0.0088 1.9E-07 47.8 8.9 101 27-128 103-226 (297)
184 COG2939 Carboxypeptidase C (ca 96.9 0.0068 1.5E-07 54.8 8.9 102 24-126 100-233 (498)
185 PF00135 COesterase: Carboxyle 96.7 0.0065 1.4E-07 57.1 8.5 103 25-128 125-244 (535)
186 PF06259 Abhydrolase_8: Alpha/ 96.7 0.0037 8E-08 49.4 5.5 54 77-130 87-145 (177)
187 COG2272 PnbA Carboxylesterase 96.7 0.014 3.1E-07 52.7 9.6 111 12-127 78-215 (491)
188 PF10340 DUF2424: Protein of u 96.6 0.017 3.8E-07 50.9 9.6 114 13-128 105-234 (374)
189 PF11144 DUF2920: Protein of u 96.6 0.015 3.2E-07 51.5 8.9 32 95-126 185-216 (403)
190 KOG2183 Prolylcarboxypeptidase 96.6 0.013 2.8E-07 51.6 8.3 100 26-128 81-201 (492)
191 cd00519 Lipase_3 Lipase (class 96.6 0.0053 1.2E-07 51.0 5.8 25 92-116 126-150 (229)
192 PF11187 DUF2974: Protein of u 96.5 0.0058 1.3E-07 50.4 5.6 44 84-128 75-122 (224)
193 KOG4840 Predicted hydrolases o 96.3 0.028 6E-07 45.4 7.9 98 26-128 37-143 (299)
194 PLN02162 triacylglycerol lipas 96.3 0.012 2.5E-07 53.1 6.4 55 76-130 260-322 (475)
195 PF04083 Abhydro_lipase: Parti 96.2 0.011 2.3E-07 38.0 4.4 37 5-41 13-59 (63)
196 COG1505 Serine proteases of th 96.2 0.06 1.3E-06 49.8 10.5 119 6-124 396-530 (648)
197 PTZ00472 serine carboxypeptida 96.1 0.0071 1.5E-07 55.7 4.6 66 245-310 364-458 (462)
198 PLN00413 triacylglycerol lipas 96.1 0.017 3.7E-07 52.2 6.8 54 77-130 267-328 (479)
199 COG2382 Fes Enterochelin ester 96.0 0.019 4.2E-07 48.6 6.2 109 15-128 84-211 (299)
200 KOG4372 Predicted alpha/beta h 96.0 0.01 2.2E-07 52.3 4.6 87 25-112 80-168 (405)
201 PF07082 DUF1350: Protein of u 95.8 0.039 8.5E-07 45.6 7.1 97 27-126 19-122 (250)
202 KOG2182 Hydrolytic enzymes of 95.8 0.11 2.4E-06 47.1 10.5 103 24-129 85-207 (514)
203 COG2819 Predicted hydrolase of 95.7 0.022 4.7E-07 47.6 5.2 37 92-128 135-171 (264)
204 PLN02571 triacylglycerol lipas 95.6 0.019 4.2E-07 51.3 4.9 37 78-114 208-246 (413)
205 PLN02213 sinapoylglucose-malat 95.6 0.062 1.4E-06 47.0 8.1 65 245-310 233-316 (319)
206 PLN02454 triacylglycerol lipas 95.6 0.021 4.6E-07 51.0 5.1 34 81-114 213-248 (414)
207 COG1770 PtrB Protease II [Amin 95.5 1.1 2.5E-05 42.2 15.9 102 24-125 447-558 (682)
208 COG3946 VirJ Type IV secretory 95.5 0.062 1.3E-06 47.4 7.2 87 27-121 262-353 (456)
209 PLN02408 phospholipase A1 95.2 0.031 6.7E-07 49.2 4.9 37 80-116 184-222 (365)
210 PF05277 DUF726: Protein of un 95.2 0.046 1E-06 47.9 5.8 39 92-130 218-261 (345)
211 PF01083 Cutinase: Cutinase; 95.1 0.063 1.4E-06 42.7 6.0 52 79-130 66-123 (179)
212 PF04301 DUF452: Protein of un 95.0 0.1 2.2E-06 42.5 6.7 77 25-127 11-88 (213)
213 PLN02934 triacylglycerol lipas 94.9 0.047 1E-06 49.8 5.2 37 77-113 304-340 (515)
214 PLN02310 triacylglycerol lipas 94.9 0.074 1.6E-06 47.5 6.4 36 79-114 190-229 (405)
215 PF05576 Peptidase_S37: PS-10 94.9 0.051 1.1E-06 48.2 5.2 105 19-125 57-165 (448)
216 KOG1282 Serine carboxypeptidas 94.6 0.3 6.6E-06 44.5 9.6 65 246-310 364-447 (454)
217 KOG1202 Animal-type fatty acid 94.6 0.22 4.8E-06 50.0 9.1 94 24-128 2122-2218(2376)
218 PLN02213 sinapoylglucose-malat 94.4 0.1 2.2E-06 45.7 6.0 76 53-128 2-95 (319)
219 PLN02324 triacylglycerol lipas 94.4 0.067 1.5E-06 47.8 4.8 35 80-114 199-235 (415)
220 PF00450 Peptidase_S10: Serine 94.4 0.025 5.3E-07 51.4 2.2 65 245-309 330-414 (415)
221 PLN02802 triacylglycerol lipas 94.3 0.075 1.6E-06 48.6 4.9 36 80-115 314-351 (509)
222 PLN02753 triacylglycerol lipas 94.2 0.08 1.7E-06 48.6 4.9 35 80-114 293-332 (531)
223 PLN02719 triacylglycerol lipas 93.7 0.11 2.3E-06 47.6 4.9 35 80-114 279-318 (518)
224 KOG2237 Predicted serine prote 93.7 0.059 1.3E-06 50.2 3.2 102 24-125 469-580 (712)
225 PLN03016 sinapoylglucose-malat 93.7 0.16 3.4E-06 46.4 5.9 120 6-127 39-208 (433)
226 PLN03037 lipase class 3 family 93.7 0.11 2.4E-06 47.6 4.9 35 80-114 300-338 (525)
227 PLN02209 serine carboxypeptida 93.4 0.18 3.9E-06 46.1 5.9 122 7-128 42-211 (437)
228 PLN02761 lipase class 3 family 93.4 0.13 2.8E-06 47.2 4.8 36 79-114 273-314 (527)
229 KOG1282 Serine carboxypeptidas 93.0 0.22 4.7E-06 45.5 5.6 106 7-113 47-187 (454)
230 KOG1516 Carboxylesterase and r 92.6 0.55 1.2E-05 44.4 8.1 102 25-126 112-229 (545)
231 KOG4569 Predicted lipase [Lipi 92.4 0.24 5.1E-06 43.7 4.9 38 78-115 155-192 (336)
232 PLN02847 triacylglycerol lipas 92.3 0.27 5.8E-06 45.9 5.3 24 91-114 248-271 (633)
233 KOG1283 Serine carboxypeptidas 91.7 0.88 1.9E-05 39.1 7.2 96 24-119 30-147 (414)
234 PF11288 DUF3089: Protein of u 91.2 0.52 1.1E-05 38.2 5.3 64 52-115 45-116 (207)
235 PF09949 DUF2183: Uncharacteri 88.0 7.5 0.00016 27.5 9.4 85 39-124 11-97 (100)
236 COG4947 Uncharacterized protei 85.9 1.7 3.6E-05 33.9 4.6 112 15-130 16-137 (227)
237 COG5153 CVT17 Putative lipase 85.3 1.5 3.3E-05 37.1 4.4 39 78-116 260-298 (425)
238 KOG4540 Putative lipase essent 85.3 1.5 3.3E-05 37.1 4.4 39 78-116 260-298 (425)
239 PF08237 PE-PPE: PE-PPE domain 84.9 9.1 0.0002 31.7 8.9 79 52-130 2-90 (225)
240 KOG2029 Uncharacterized conser 83.3 2.4 5.1E-05 39.7 5.1 38 76-113 505-545 (697)
241 COG4287 PqaA PhoPQ-activated p 78.8 15 0.00033 32.5 8.2 37 86-123 226-262 (507)
242 cd01714 ETF_beta The electron 78.4 14 0.00031 29.9 7.8 62 54-125 79-145 (202)
243 TIGR03712 acc_sec_asp2 accesso 75.5 19 0.00041 33.2 8.2 95 16-115 279-378 (511)
244 COG4553 DepA Poly-beta-hydroxy 75.4 42 0.0009 28.9 9.6 102 26-131 104-211 (415)
245 PRK12467 peptide synthase; Pro 75.3 13 0.00029 44.1 9.1 96 26-126 3693-3792(3956)
246 PF07519 Tannase: Tannase and 75.3 6.3 0.00014 36.6 5.4 82 46-129 54-150 (474)
247 PRK10279 hypothetical protein; 74.8 2.8 6.1E-05 36.3 2.9 37 84-120 23-59 (300)
248 PF07859 Abhydrolase_3: alpha/ 73.6 1.4 3.1E-05 35.6 0.8 45 245-293 166-210 (211)
249 cd07225 Pat_PNPLA6_PNPLA7 Pata 73.3 4.1 8.8E-05 35.5 3.5 32 84-115 33-64 (306)
250 PRK11613 folP dihydropteroate 72.1 28 0.00061 29.9 8.2 77 25-110 133-227 (282)
251 PF00698 Acyl_transf_1: Acyl t 71.5 3.3 7.3E-05 36.2 2.6 31 84-114 74-104 (318)
252 COG1752 RssA Predicted esteras 70.4 5.3 0.00011 34.7 3.6 33 84-116 29-61 (306)
253 smart00827 PKS_AT Acyl transfe 70.4 5.2 0.00011 34.5 3.5 31 84-114 72-102 (298)
254 PF06850 PHB_depo_C: PHB de-po 70.2 5.8 0.00013 31.8 3.4 66 243-311 131-202 (202)
255 PF03610 EIIA-man: PTS system 69.0 41 0.00088 24.3 7.7 75 27-114 2-77 (116)
256 KOG2385 Uncharacterized conser 68.9 15 0.00032 34.1 6.0 41 91-131 444-489 (633)
257 cd07210 Pat_hypo_W_succinogene 68.6 6.9 0.00015 32.2 3.7 30 86-115 20-49 (221)
258 COG2939 Carboxypeptidase C (ca 68.0 11 0.00023 34.8 5.0 64 245-309 425-489 (498)
259 cd07198 Patatin Patatin-like p 67.4 6 0.00013 31.0 3.0 34 84-117 16-49 (172)
260 TIGR03131 malonate_mdcH malona 67.1 6.6 0.00014 33.8 3.5 32 84-115 66-97 (295)
261 cd07227 Pat_Fungal_NTE1 Fungal 67.0 6.7 0.00014 33.4 3.4 32 84-115 28-59 (269)
262 cd07207 Pat_ExoU_VipD_like Exo 65.1 7.9 0.00017 30.9 3.4 30 86-115 19-48 (194)
263 TIGR00128 fabD malonyl CoA-acy 64.9 7.3 0.00016 33.4 3.3 30 86-115 74-104 (290)
264 cd07212 Pat_PNPLA9 Patatin-lik 63.1 10 0.00022 33.2 3.8 32 84-115 18-53 (312)
265 PF06309 Torsin: Torsin; Inte 62.2 20 0.00044 26.6 4.7 20 23-42 50-69 (127)
266 COG2830 Uncharacterized protei 61.1 39 0.00084 26.3 6.1 76 27-128 13-89 (214)
267 PF07519 Tannase: Tannase and 60.7 17 0.00037 33.8 5.1 65 246-310 354-426 (474)
268 PF05576 Peptidase_S37: PS-10 59.4 19 0.00041 32.6 4.8 55 246-308 352-411 (448)
269 KOG2521 Uncharacterized conser 59.3 1.3E+02 0.0028 26.8 13.5 65 244-310 224-289 (350)
270 cd07228 Pat_NTE_like_bacteria 58.6 13 0.00028 29.3 3.5 31 87-117 21-51 (175)
271 cd07209 Pat_hypo_Ecoli_Z1214_l 58.0 12 0.00027 30.6 3.4 33 84-116 16-48 (215)
272 TIGR02764 spore_ybaN_pdaB poly 56.2 12 0.00025 29.9 2.9 33 27-59 153-188 (191)
273 cd07230 Pat_TGL4-5_like Triacy 55.4 8 0.00017 35.3 2.0 37 87-123 94-130 (421)
274 cd00006 PTS_IIA_man PTS_IIA, P 53.0 87 0.0019 22.8 8.2 73 27-112 3-76 (122)
275 PRK06824 translation initiatio 52.7 90 0.0019 22.9 7.0 76 13-100 42-117 (118)
276 COG0218 Predicted GTPase [Gene 52.3 22 0.00047 28.7 3.7 15 55-69 72-86 (200)
277 cd07205 Pat_PNPLA6_PNPLA7_NTE1 52.1 21 0.00046 27.9 3.7 29 87-115 21-49 (175)
278 cd07222 Pat_PNPLA4 Patatin-lik 50.8 12 0.00027 31.3 2.3 24 97-121 34-57 (246)
279 TIGR02816 pfaB_fam PfaB family 50.0 17 0.00038 34.3 3.3 33 84-116 254-287 (538)
280 cd07229 Pat_TGL3_like Triacylg 49.9 11 0.00023 34.1 1.8 39 85-123 102-140 (391)
281 TIGR02884 spore_pdaA delta-lac 49.9 22 0.00048 29.3 3.6 33 27-59 188-221 (224)
282 cd07232 Pat_PLPL Patain-like p 46.8 12 0.00025 34.1 1.6 41 82-123 84-124 (407)
283 TIGR02873 spore_ylxY probable 45.9 29 0.00062 29.6 3.8 33 27-59 232-264 (268)
284 PF13207 AAA_17: AAA domain; P 45.1 36 0.00077 24.4 3.8 70 28-100 1-77 (121)
285 PF09994 DUF2235: Uncharacteri 44.8 2E+02 0.0043 24.6 9.3 62 54-115 37-113 (277)
286 cd07231 Pat_SDP1-like Sugar-De 44.8 15 0.00033 32.0 2.0 36 87-122 89-124 (323)
287 COG1087 GalE UDP-glucose 4-epi 44.7 87 0.0019 27.2 6.3 83 44-128 16-119 (329)
288 COG3887 Predicted signaling pr 44.5 36 0.00078 32.3 4.3 104 24-130 257-379 (655)
289 PF03490 Varsurf_PPLC: Variant 44.3 26 0.00057 21.0 2.3 27 74-100 5-31 (51)
290 PRK07451 translation initiatio 44.3 1.2E+02 0.0027 22.1 7.3 75 14-100 40-114 (115)
291 cd07224 Pat_like Patatin-like 44.0 29 0.00062 28.8 3.4 33 85-117 18-52 (233)
292 cd07208 Pat_hypo_Ecoli_yjju_li 43.9 29 0.00063 29.3 3.6 33 87-119 19-52 (266)
293 COG3933 Transcriptional antite 43.7 1.9E+02 0.0042 26.6 8.6 75 25-112 109-183 (470)
294 PF10605 3HBOH: 3HB-oligomer h 43.0 30 0.00065 32.9 3.6 51 243-293 552-605 (690)
295 cd07204 Pat_PNPLA_like Patatin 41.6 35 0.00077 28.5 3.7 23 97-119 34-57 (243)
296 PF00975 Thioesterase: Thioest 40.4 59 0.0013 26.3 4.9 60 245-308 168-229 (229)
297 cd03818 GT1_ExpC_like This fam 39.0 57 0.0012 29.3 4.9 37 28-67 2-39 (396)
298 PF11713 Peptidase_C80: Peptid 38.5 22 0.00048 27.5 1.8 50 57-106 58-116 (157)
299 PF06277 EutA: Ethanolamine ut 38.2 3.4E+02 0.0073 25.3 9.8 115 7-128 317-443 (473)
300 PF14253 AbiH: Bacteriophage a 37.6 42 0.0009 28.3 3.6 21 86-106 226-247 (270)
301 COG1576 Uncharacterized conser 36.9 1.4E+02 0.003 23.0 5.8 50 51-111 66-115 (155)
302 COG3621 Patatin [General funct 36.7 53 0.0012 28.8 3.9 40 79-118 22-66 (394)
303 PRK02399 hypothetical protein; 36.5 3.3E+02 0.0072 24.8 10.0 97 29-125 6-128 (406)
304 KOG1252 Cystathionine beta-syn 35.5 1.3E+02 0.0029 26.5 6.1 119 4-125 184-335 (362)
305 PF03205 MobB: Molybdopterin g 35.2 72 0.0016 24.0 4.2 42 27-68 1-44 (140)
306 PRK05579 bifunctional phosphop 34.7 3.2E+02 0.0069 24.9 8.8 71 26-101 117-196 (399)
307 cd07218 Pat_iPLA2 Calcium-inde 34.1 51 0.0011 27.6 3.5 23 98-120 34-57 (245)
308 cd07221 Pat_PNPLA3 Patatin-lik 33.7 54 0.0012 27.6 3.5 26 96-121 34-60 (252)
309 TIGR01158 SUI1_rel translation 33.6 1.7E+02 0.0038 20.7 6.3 70 13-93 25-94 (101)
310 COG0482 TrmU Predicted tRNA(5- 33.5 1.4E+02 0.003 26.6 6.1 65 26-99 5-69 (356)
311 PRK09019 translation initiatio 33.0 1.9E+02 0.0041 20.9 7.0 76 13-100 32-107 (108)
312 cd07217 Pat17_PNPLA8_PNPLA9_li 32.8 55 0.0012 29.0 3.6 19 96-114 42-61 (344)
313 TIGR02260 benz_CoA_red_B benzo 32.7 3.9E+02 0.0085 24.5 9.4 39 25-64 266-304 (413)
314 COG3727 Vsr DNA G:T-mismatch r 32.7 1.4E+02 0.0031 22.3 5.0 7 27-33 59-65 (150)
315 cd07211 Pat_PNPLA8 Patatin-lik 32.2 48 0.001 28.8 3.1 33 81-113 24-60 (308)
316 cd07206 Pat_TGL3-4-5_SDP1 Tria 32.2 48 0.001 28.7 3.0 38 81-119 85-122 (298)
317 PF06792 UPF0261: Uncharacteri 31.4 4.1E+02 0.0088 24.3 10.3 96 30-125 5-126 (403)
318 COG3673 Uncharacterized conser 31.4 3.7E+02 0.008 23.8 8.4 90 26-115 32-143 (423)
319 PF00448 SRP54: SRP54-type pro 31.2 2.8E+02 0.006 22.3 7.3 72 44-125 75-148 (196)
320 COG0294 FolP Dihydropteroate s 30.3 1.2E+02 0.0027 25.9 5.2 50 53-112 171-221 (274)
321 TIGR02883 spore_cwlD N-acetylm 30.3 1.2E+02 0.0025 24.2 4.9 42 55-98 2-48 (189)
322 cd01819 Patatin_and_cPLA2 Pata 29.8 70 0.0015 24.5 3.4 19 94-112 28-46 (155)
323 TIGR01626 ytfJ_HI0045 conserve 29.6 94 0.002 24.8 4.1 90 9-111 40-141 (184)
324 KOG4388 Hormone-sensitive lipa 29.3 1.9E+02 0.0042 27.7 6.4 95 27-128 398-507 (880)
325 TIGR01496 DHPS dihydropteroate 29.1 3E+02 0.0066 23.2 7.3 25 41-66 150-176 (257)
326 cd07220 Pat_PNPLA2 Patatin-lik 28.7 69 0.0015 26.9 3.4 21 96-116 38-58 (249)
327 TIGR01840 esterase_phb esteras 28.7 46 0.001 26.9 2.3 25 244-268 167-191 (212)
328 PF05577 Peptidase_S28: Serine 28.4 63 0.0014 29.6 3.4 40 246-294 377-416 (434)
329 PF01580 FtsK_SpoIIIE: FtsK/Sp 27.2 1.4E+02 0.0031 23.9 4.9 39 29-67 41-85 (205)
330 TIGR00521 coaBC_dfp phosphopan 26.9 4.8E+02 0.01 23.7 9.3 87 26-115 113-225 (390)
331 TIGR03607 patatin-related prot 26.4 66 0.0014 31.8 3.2 32 82-113 51-85 (739)
332 PRK14581 hmsF outer membrane N 25.9 76 0.0017 31.0 3.5 76 24-101 47-142 (672)
333 PF10081 Abhydrolase_9: Alpha/ 25.9 1.2E+02 0.0027 26.0 4.3 50 80-129 92-147 (289)
334 PF09664 DUF2399: Protein of u 25.6 1E+02 0.0022 23.7 3.5 32 24-57 40-71 (152)
335 PF05908 DUF867: Protein of un 25.5 45 0.00097 26.9 1.6 44 12-59 15-62 (194)
336 COG0331 FabD (acyl-carrier-pro 24.9 75 0.0016 27.8 3.0 22 92-113 83-104 (310)
337 PF03681 UPF0150: Uncharacteri 24.8 52 0.0011 19.4 1.5 33 50-89 11-43 (48)
338 cd01311 PDC_hydrolase 2-pyrone 24.5 4E+02 0.0087 22.3 7.4 46 81-126 30-77 (263)
339 KOG2170 ATPase of the AAA+ sup 23.6 56 0.0012 28.4 1.9 20 23-42 107-126 (344)
340 TIGR02683 upstrm_HI1419 probab 23.6 99 0.0022 21.4 2.9 24 13-38 57-80 (95)
341 PRK10431 N-acetylmuramoyl-l-al 23.0 2.2E+02 0.0047 26.4 5.7 71 54-125 192-268 (445)
342 PRK09936 hypothetical protein; 22.9 3.5E+02 0.0075 23.4 6.4 52 37-94 36-87 (296)
343 PF02590 SPOUT_MTase: Predicte 22.8 2E+02 0.0043 22.2 4.7 44 51-104 66-109 (155)
344 cd01014 nicotinamidase_related 22.8 1.8E+02 0.0039 22.1 4.5 46 82-127 88-133 (155)
345 cd07213 Pat17_PNPLA8_PNPLA9_li 22.6 62 0.0013 27.8 2.1 21 95-115 34-55 (288)
346 PLN02752 [acyl-carrier protein 22.5 78 0.0017 27.9 2.8 18 97-114 127-144 (343)
347 PF01734 Patatin: Patatin-like 22.1 69 0.0015 24.8 2.2 21 95-115 28-48 (204)
348 COG1506 DAP2 Dipeptidyl aminop 21.8 3.5E+02 0.0076 26.3 7.2 60 25-90 551-615 (620)
349 PRK14194 bifunctional 5,10-met 21.5 1.8E+02 0.0038 25.4 4.5 35 81-115 143-183 (301)
350 CHL00041 rps11 ribosomal prote 21.4 3.3E+02 0.0072 19.8 5.5 59 61-122 45-105 (116)
351 PF15566 Imm18: Immunity prote 21.4 1.3E+02 0.0028 18.4 2.6 30 77-106 4-33 (52)
352 PRK10319 N-acetylmuramoyl-l-al 21.2 2.2E+02 0.0048 24.5 5.1 72 52-125 55-132 (287)
353 PRK15180 Vi polysaccharide bio 21.2 2.2E+02 0.0047 26.7 5.1 76 26-101 97-196 (831)
354 PRK14974 cell division protein 21.1 5.9E+02 0.013 22.6 9.6 67 49-125 219-287 (336)
355 TIGR00246 tRNA_RlmH_YbeA rRNA 21.1 2.5E+02 0.0054 21.6 4.9 42 53-105 66-107 (153)
356 COG0159 TrpA Tryptophan syntha 20.7 5.4E+02 0.012 22.0 7.1 73 24-112 94-167 (265)
357 PRK14582 pgaB outer membrane N 20.7 1.1E+02 0.0023 30.0 3.4 75 24-100 47-141 (671)
358 PF07380 Pneumo_M2: Pneumoviru 20.6 1.3E+02 0.0029 20.0 2.8 35 60-94 44-79 (89)
359 PRK05309 30S ribosomal protein 20.4 3.3E+02 0.0073 20.2 5.3 54 60-116 48-103 (128)
360 PRK14665 mnmA tRNA-specific 2- 20.3 4.2E+02 0.0091 23.7 6.8 62 24-99 5-66 (360)
361 cd01012 YcaC_related YcaC rela 20.1 3E+02 0.0065 20.9 5.3 47 82-128 77-123 (157)
No 1
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=1.5e-45 Score=306.53 Aligned_cols=292 Identities=40% Similarity=0.742 Sum_probs=217.8
Q ss_pred ccccceeeeCCeEEEEEecCC-CCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHH
Q 021424 3 QIEHKFIKVQGLNLHIAEAGA-DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMV 81 (312)
Q Consensus 3 ~~~~~~~~~~g~~i~~~~~g~-~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a 81 (312)
.+++++++.+|.++||.+.|+ +||.|+|+||||.++++|+.++..|+..+|||+|+|+||+|.||.|+.-+.||+..++
T Consensus 21 ~~~hk~~~~~gI~~h~~e~g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~ 100 (322)
T KOG4178|consen 21 AISHKFVTYKGIRLHYVEGGPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELV 100 (322)
T ss_pred hcceeeEEEccEEEEEEeecCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHH
Confidence 467899999999999999997 7899999999999999999999999998899999999999999998876899999999
Q ss_pred HHHHHHHHHhCCceEEEEEcCccHHHHHHHHHhcccccceeEEecCCCCCCCcc---hhhhccCcchhhhhcCCcchhhh
Q 021424 82 DDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPI---EFHKYLPEGFYISRWQEPGRAEA 158 (312)
Q Consensus 82 ~di~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 158 (312)
.|+..+++.|+.++++++|||||+.||+.+|..+|++|+++|+++.+...+... .........++....+.+...+.
T Consensus 101 ~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~ 180 (322)
T KOG4178|consen 101 GDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPET 180 (322)
T ss_pred HHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEeccccCcchh
Confidence 999999999999999999999999999999999999999999998765422111 11122233444444455554444
Q ss_pred hccCCcHHHHHHHHHHhhcCCCCCCCcchhhhhhhcCCCCCCCCCCCHHHHHHHHHhhccCCCCcccccccccccccc--
Q 021424 159 DFGRLDAKTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLRENF-- 236 (312)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 236 (312)
.+.....+.+.... .....+.. ....- .....+.|.+++.++.+...+...++...+.. |+.+.-+.
T Consensus 181 ~~s~~~~~~~~~~~----~~~~~~~~----~~~~~--~~~~~~~w~t~edi~~~~~~f~~~g~~gplNy-yrn~~r~w~a 249 (322)
T KOG4178|consen 181 ELSKDDTEMLVKTF----RTRKTPGP----LIVPK--QPNENPLWLTEEDIAFYVSKFQIDGFTGPLNY-YRNFRRNWEA 249 (322)
T ss_pred hhccchhHHhHHhh----hccccCCc----cccCC--CCCCccchhhHHHHHHHHhccccccccccchh-hHHHhhCchh
Confidence 44443333333221 11111100 00000 00111568899988888877766666666665 55554332
Q ss_pred -CCCCcccccccEEEEeeCCCCCCCCCCchhhhhccchhccCCCc-eEEEeCCCCCCCCCcChHHHHHHHHHHhhhc
Q 021424 237 -STPEVIAVKVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNL-EIIHLPEGSHFVQEQSPEEVNQLILTFLNKH 311 (312)
Q Consensus 237 -~~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~GH~~~~e~p~~~~~~i~~fl~~~ 311 (312)
..... ++++|+++|+|+.|.+.+.+. ..+.+++..|+. +.++++++||++++|+|+++++.|.+|+++.
T Consensus 250 ~~~~~~-~i~iPv~fi~G~~D~v~~~p~-----~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 250 APWALA-KITIPVLFIWGDLDPVLPYPI-----FGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred cccccc-ccccceEEEEecCcccccchh-----HHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHhh
Confidence 22222 789999999999999887541 233456677886 7889999999999999999999999999863
No 2
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=1.5e-39 Score=281.56 Aligned_cols=279 Identities=22% Similarity=0.332 Sum_probs=174.6
Q ss_pred ccccceeeeCCeEEEEEecCCCCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCC-----CCCCCH
Q 021424 3 QIEHKFIKVQGLNLHIAEAGADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAE-----PEKTSF 77 (312)
Q Consensus 3 ~~~~~~~~~~g~~i~~~~~g~~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~-----~~~~~~ 77 (312)
+....+++++|.+++|...|+++|+|||+|||++++..|..+++.|.. .|+||++|+||||.|+.+.. ...|++
T Consensus 7 ~~~~~~~~~~~~~i~y~~~G~~~~~vlllHG~~~~~~~w~~~~~~L~~-~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~ 85 (294)
T PLN02824 7 QVETRTWRWKGYNIRYQRAGTSGPALVLVHGFGGNADHWRKNTPVLAK-SHRVYAIDLLGYGYSDKPNPRSAPPNSFYTF 85 (294)
T ss_pred CCCCceEEEcCeEEEEEEcCCCCCeEEEECCCCCChhHHHHHHHHHHh-CCeEEEEcCCCCCCCCCCccccccccccCCH
Confidence 355788999999999999986579999999999999999999999976 58999999999999986531 136899
Q ss_pred HHHHHHHHHHHHHhCCceEEEEEcCccHHHHHHHHHhcccccceeEEecCCCCCCCcchhhhccCcchh--hhhc-CCcc
Q 021424 78 QDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFY--ISRW-QEPG 154 (312)
Q Consensus 78 ~~~a~di~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~ 154 (312)
+++++|+.++++++++++++||||||||.|++.+|+++|++|+++|+++++........... ...... ...+ ....
T Consensus 86 ~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 164 (294)
T PLN02824 86 ETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPW-LGRPFIKAFQNLLRETA 164 (294)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccch-hhhHHHHHHHHHHhchh
Confidence 99999999999999999999999999999999999999999999999986432110000000 000000 0000 0000
Q ss_pred hhhhhccCCcHHHHHHHHHH-hhcCCCCCCCcchhhhhhhcCCCCCCCCCCCHHHHHHHHHhhccCCCCccccccccccc
Q 021424 155 RAEADFGRLDAKTVVRNIYI-LFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLR 233 (312)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (312)
.....+.........+.... .+.... .. . .+....+.... ........+..... +.. .
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~-~~~~~~~~~~~-----~~~~~~~~~~~~~~-----------~~~-~ 223 (294)
T PLN02824 165 VGKAFFKSVATPETVKNILCQCYHDDS-AV--T-DELVEAILRPG-----LEPGAVDVFLDFIS-----------YSG-G 223 (294)
T ss_pred HHHHHHHhhcCHHHHHHHHHHhccChh-hc--c-HHHHHHHHhcc-----CCchHHHHHHHHhc-----------ccc-c
Confidence 00000000000000011000 000000 00 0 00000000000 00000111111100 000 0
Q ss_pred cccCCCCcccccccEEEEeeCCCCCCCCCCchhhhhccchhccCCCceEEEeCCCCCCCCCcChHHHHHHHHHHhhhc
Q 021424 234 ENFSTPEVIAVKVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLNKH 311 (312)
Q Consensus 234 ~~~~~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~~~ 311 (312)
. .......++++|+|+|+|++|.+++.+.. +.+++..|++++++++++||++++|+|++|++.|.+|++++
T Consensus 224 ~-~~~~~l~~i~~P~lvi~G~~D~~~~~~~~------~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 224 P-LPEELLPAVKCPVLIAWGEKDPWEPVELG------RAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESFVARH 294 (294)
T ss_pred c-chHHHHhhcCCCeEEEEecCCCCCChHHH------HHHHhcCCccceEEeCCCCCChhhhCHHHHHHHHHHHHhcC
Confidence 0 00011116899999999999998864322 33566778899999999999999999999999999999864
No 3
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=5.6e-38 Score=271.84 Aligned_cols=269 Identities=29% Similarity=0.455 Sum_probs=172.4
Q ss_pred cccceeeeCCeEEEEEecCCCCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHH
Q 021424 4 IEHKFIKVQGLNLHIAEAGADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDD 83 (312)
Q Consensus 4 ~~~~~~~~~g~~i~~~~~g~~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~d 83 (312)
++..+++++|.+++|.+.| ++|+||||||++++...|+.+++.|.+. |+||++|+||||.|+.+. ..|+++++++|
T Consensus 7 ~~~~~~~~~g~~i~y~~~G-~g~~vvllHG~~~~~~~w~~~~~~L~~~-~~via~D~~G~G~S~~~~--~~~~~~~~a~d 82 (295)
T PRK03592 7 GEMRRVEVLGSRMAYIETG-EGDPIVFLHGNPTSSYLWRNIIPHLAGL-GRCLAPDLIGMGASDKPD--IDYTFADHARY 82 (295)
T ss_pred CcceEEEECCEEEEEEEeC-CCCEEEEECCCCCCHHHHHHHHHHHhhC-CEEEEEcCCCCCCCCCCC--CCCCHHHHHHH
Confidence 4567888899999999999 6899999999999999999999888764 799999999999998764 36899999999
Q ss_pred HHHHHHHhCCceEEEEEcCccHHHHHHHHHhcccccceeEEecCCCCCCCcchhhhccCcchhhhhcCCcchhhhhccCC
Q 021424 84 LLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRL 163 (312)
Q Consensus 84 i~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (312)
+.+++++++++++++|||||||.||+.+|.++|++|+++|+++++..+.....+...... ....+..+....... .
T Consensus 83 l~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--~ 158 (295)
T PRK03592 83 LDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRE--LFQALRSPGEGEEMV--L 158 (295)
T ss_pred HHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHH--HHHHHhCcccccccc--c
Confidence 999999999999999999999999999999999999999999864222110000000000 000000000000000 0
Q ss_pred cHHHHHHHHHHhhcCCCCCCCcchhhhhhhcCCCCCCCCCCCHHHHHHHHHhhccCC-CCcccccccccc----------
Q 021424 164 DAKTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSG-FRTALQVPYRTL---------- 232 (312)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---------- 232 (312)
........ .+... .....+++.++.+...+.... ....... ++..
T Consensus 159 ~~~~~~~~---~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 214 (295)
T PRK03592 159 EENVFIER---VLPGS--------------------ILRPLSDEEMAVYRRPFPTPESRRPTLSW-PRELPIDGEPADVV 214 (295)
T ss_pred chhhHHhh---cccCc--------------------ccccCCHHHHHHHHhhcCCchhhhhhhhh-hhhcCCCCcchhhH
Confidence 00000000 00000 000112222221111110000 0000000 0000
Q ss_pred --ccccCCCCcccccccEEEEeeCCCCCCCCCCchhhhhccchhccCCCceEEEeCCCCCCCCCcChHHHHHHHHHHhhh
Q 021424 233 --RENFSTPEVIAVKVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLNK 310 (312)
Q Consensus 233 --~~~~~~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~~ 310 (312)
..... ....++++|+|+|+|++|.+++..... +.+++..|++++++++++||++++|+|++|++.|.+|+.+
T Consensus 215 ~~~~~~~-~~l~~i~~P~lii~G~~D~~~~~~~~~-----~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~ 288 (295)
T PRK03592 215 ALVEEYA-QWLATSDVPKLLINAEPGAILTTGAIR-----DWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAAWLRR 288 (295)
T ss_pred hhhhHhH-HHhccCCCCeEEEeccCCcccCcHHHH-----HHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHHHHHH
Confidence 00000 011168999999999999988543322 2234457899999999999999999999999999999975
No 4
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1e-37 Score=271.02 Aligned_cols=274 Identities=22% Similarity=0.334 Sum_probs=172.9
Q ss_pred cccceeeeCC-----eEEEEEecCC-CCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCH
Q 021424 4 IEHKFIKVQG-----LNLHIAEAGA-DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSF 77 (312)
Q Consensus 4 ~~~~~~~~~g-----~~i~~~~~g~-~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~ 77 (312)
++.+++++++ .+|+|.+.|. ++|+||||||+++++..|..+++.|.+.+|+|+++|+||||.|+++.....|++
T Consensus 19 ~~~~~~~~~~~~~~~~~i~y~~~G~~~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~ 98 (302)
T PRK00870 19 FAPHYVDVDDGDGGPLRMHYVDEGPADGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTY 98 (302)
T ss_pred CCceeEeecCCCCceEEEEEEecCCCCCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCH
Confidence 4567899988 8999999985 579999999999999999999999876689999999999999987644456899
Q ss_pred HHHHHHHHHHHHHhCCceEEEEEcCccHHHHHHHHHhcccccceeEEecCCCCCCCcchhhhccCcchhhhhcCCcchhh
Q 021424 78 QDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAE 157 (312)
Q Consensus 78 ~~~a~di~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (312)
.++++|+.+++++++++++++|||||||.+++.+|..+|++|.++|++++......... ... ...|...
T Consensus 99 ~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~-----~~~--~~~~~~~---- 167 (302)
T PRK00870 99 ARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPM-----PDA--FWAWRAF---- 167 (302)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccc-----hHH--Hhhhhcc----
Confidence 99999999999999999999999999999999999999999999999975321111000 000 0000000
Q ss_pred hhccCCcHHHHHHHHHHhhcCCCCCCCcchhhhhhhcCCCCCCCCCCCHHHHHHHHHhhccCCCCccccccccccccccC
Q 021424 158 ADFGRLDAKTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLRENFS 237 (312)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (312)
............. ... ...... .+.............+ . .....+.... ........ ...... .
T Consensus 168 ---~~~~~~~~~~~~~---~~~-~~~~~~-~~~~~~~~~~~~~~~~-~-~~~~~~~~~~-~~~~~~~~---~~~~~~--~ 231 (302)
T PRK00870 168 ---SQYSPVLPVGRLV---NGG-TVRDLS-DAVRAAYDAPFPDESY-K-AGARAFPLLV-PTSPDDPA---VAANRA--A 231 (302)
T ss_pred ---cccCchhhHHHHh---hcc-ccccCC-HHHHHHhhcccCChhh-h-cchhhhhhcC-CCCCCCcc---hHHHHH--H
Confidence 0000000000000 000 000000 0000000000000000 0 0000000000 00000000 000000 0
Q ss_pred CCCcccccccEEEEeeCCCCCCCCCCchhhhhccchhccCCCce---EEEeCCCCCCCCCcChHHHHHHHHHHhhhc
Q 021424 238 TPEVIAVKVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLE---IIHLPEGSHFVQEQSPEEVNQLILTFLNKH 311 (312)
Q Consensus 238 ~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~---~~~~~~~GH~~~~e~p~~~~~~i~~fl~~~ 311 (312)
.....++++|+++|+|++|++++... +.+.+.+|+++ +++++++||++++|+|++|++.|.+||.++
T Consensus 232 ~~~l~~i~~P~lii~G~~D~~~~~~~-------~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 232 WAVLERWDKPFLTAFSDSDPITGGGD-------AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred HHhhhcCCCceEEEecCCCCcccCch-------HHHHhhcccccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 01112789999999999999887432 24566678776 889999999999999999999999999865
No 5
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=2.3e-37 Score=274.45 Aligned_cols=279 Identities=21% Similarity=0.346 Sum_probs=170.3
Q ss_pred ceeeeCCe-EEEEEecCCC-----CceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHH
Q 021424 7 KFIKVQGL-NLHIAEAGAD-----AHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDM 80 (312)
Q Consensus 7 ~~~~~~g~-~i~~~~~g~~-----~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~ 80 (312)
++++.+|. +++|.+.|++ +|+||||||+++++..|.+++..|.+ +|+|+++|+||||.|+++.+ ..|++.++
T Consensus 64 ~~~~~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~-~~~~~~~~ 141 (360)
T PLN02679 64 KKWKWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAK-NYTVYAIDLLGFGASDKPPG-FSYTMETW 141 (360)
T ss_pred ceEEECCceeEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCCC-ccccHHHH
Confidence 56777887 9999998842 48999999999999999999988865 79999999999999987543 46899999
Q ss_pred HHHHHHHHHHhCCceEEEEEcCccHHHHHHHHHh-cccccceeEEecCCCCCCCcc---hh-hhc-cCcchhhhhc-CCc
Q 021424 81 VDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQ-HQERVSGVITLGVPILPPGPI---EF-HKY-LPEGFYISRW-QEP 153 (312)
Q Consensus 81 a~di~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~-~p~~v~~lv~~~~~~~~~~~~---~~-~~~-~~~~~~~~~~-~~~ 153 (312)
++++.++++++++++++||||||||.+++.+|+. +|++|+++|+++++....... .. ... .+...+...+ ..+
T Consensus 142 a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (360)
T PLN02679 142 AELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQR 221 (360)
T ss_pred HHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhch
Confidence 9999999999999999999999999999999974 799999999998653211100 00 000 0000000000 000
Q ss_pred chhhhhccCCcHHHHHHHHHHhhcCCCCCCCcchhhhhhhcCCCCCCCCCCCHHHHHHHHHhhccCCCCccccccccccc
Q 021424 154 GRAEADFGRLDAKTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLR 233 (312)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (312)
......+.....+..++..+........... .+..+...... ........+...... ..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-----~~~~~~~~~~~~~~~-------------~~ 280 (360)
T PLN02679 222 GIASALFNRVKQRDNLKNILLSVYGNKEAVD---DELVEIIRGPA-----DDEGALDAFVSIVTG-------------PP 280 (360)
T ss_pred hhHHHHHHHhcCHHHHHHHHHHhccCcccCC---HHHHHHHHhhc-----cCCChHHHHHHHHhc-------------CC
Confidence 0000000000001111110000000000000 01111000000 000001111110000 00
Q ss_pred cccCCCCcccccccEEEEeeCCCCCCCCCCc-hhhhhccchhccCCCceEEEeCCCCCCCCCcChHHHHHHHHHHhhh
Q 021424 234 ENFSTPEVIAVKVPALLIMGDKDYFLKFPGI-EDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLNK 310 (312)
Q Consensus 234 ~~~~~~~~~~i~~P~l~i~G~~D~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~~ 310 (312)
.........+|++|||+|+|++|++++.+.. ..+. ..+.+.+|++++++++++||++++|+|++|++.|.+||++
T Consensus 281 ~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~--~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 281 GPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYF--SSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQ 356 (360)
T ss_pred CCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHH--HhhhccCCceEEEEcCCCCCCccccCHHHHHHHHHHHHHh
Confidence 0000001116899999999999999875421 1111 2355678999999999999999999999999999999975
No 6
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=6.3e-37 Score=263.68 Aligned_cols=271 Identities=20% Similarity=0.345 Sum_probs=170.4
Q ss_pred cccceeeeCCeEEEEEecCCCCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHH
Q 021424 4 IEHKFIKVQGLNLHIAEAGADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDD 83 (312)
Q Consensus 4 ~~~~~~~~~g~~i~~~~~g~~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~d 83 (312)
+...+++++|.+++|...| ++|+||||||+++++..|+.+++.|.+ +|+|+++|+||||.|+.+.. ..|++.+++++
T Consensus 14 ~~~~~~~~~~~~i~y~~~G-~~~~iv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~ 90 (286)
T PRK03204 14 FESRWFDSSRGRIHYIDEG-TGPPILLCHGNPTWSFLYRDIIVALRD-RFRCVAPDYLGFGLSERPSG-FGYQIDEHARV 90 (286)
T ss_pred ccceEEEcCCcEEEEEECC-CCCEEEEECCCCccHHHHHHHHHHHhC-CcEEEEECCCCCCCCCCCCc-cccCHHHHHHH
Confidence 5667899999999999999 689999999999999999999888865 69999999999999987543 36899999999
Q ss_pred HHHHHHHhCCceEEEEEcCccHHHHHHHHHhcccccceeEEecCCCCCCCcchhhhccCcchhhhhcCCcchhhhhccCC
Q 021424 84 LLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRL 163 (312)
Q Consensus 84 i~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (312)
+.+++++++.++++++||||||.|++.+|..+|++|+++|+++++..+...... ..+...+......... .
T Consensus 91 ~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~---~ 161 (286)
T PRK03204 91 IGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAM------KAFSRVMSSPPVQYAI---L 161 (286)
T ss_pred HHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhH------HHHHHHhccccchhhh---h
Confidence 999999999999999999999999999999999999999988654322111000 0000000000000000 0
Q ss_pred cHHHHHHHHHHhhcCCCCCCCcchhhhhhhcCCCCCCCCCCCHHHHHHHHHhhccCCCCccccccccccccccC-CCCcc
Q 021424 164 DAKTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLRENFS-TPEVI 242 (312)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 242 (312)
......+... .. ......+......+ ... ............... .+.. .+....... .....
T Consensus 162 ~~~~~~~~~~---~~-~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~~~~ 224 (286)
T PRK03204 162 RRNFFVERLI---PA-GTEHRPSSAVMAHY-RAV-----QPNAAARRGVAEMPK--QILA-----ARPLLARLAREVPAT 224 (286)
T ss_pred hhhHHHHHhc---cc-cccCCCCHHHHHHh-cCC-----CCCHHHHHHHHHHHH--hcch-----hhHHHHHhhhhhhhh
Confidence 0000001100 00 00000001111111 000 001111111100000 0000 000000000 00000
Q ss_pred cccccEEEEeeCCCCCCCCCCchhhhhccchhccCCCceEEEeCCCCCCCCCcChHHHHHHHHHHh
Q 021424 243 AVKVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFL 308 (312)
Q Consensus 243 ~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl 308 (312)
.+++||++|+|++|.+++.... .+.+++.+|++++++++++||++++|+|++|++.|.+||
T Consensus 225 ~~~~PtliI~G~~D~~~~~~~~-----~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 225 LGTKPTLLVWGMKDVAFRPKTI-----LPRLRATFPDHVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred cCCCCeEEEecCCCcccCcHHH-----HHHHHHhcCCCeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 2389999999999987753321 235667889999999999999999999999999999997
No 7
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=1.5e-36 Score=260.38 Aligned_cols=260 Identities=18% Similarity=0.206 Sum_probs=166.5
Q ss_pred ccceeeeCCeEEEEEec-CC-CCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHH
Q 021424 5 EHKFIKVQGLNLHIAEA-GA-DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVD 82 (312)
Q Consensus 5 ~~~~~~~~g~~i~~~~~-g~-~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~ 82 (312)
-.++++++|.+++|... |. +++||||+||+++++..|..+++.|.+ +|+||++|+||||.|+.+. ..++++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~plvllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~--~~~~~~~~~~ 79 (276)
T TIGR02240 3 IFRTIDLDGQSIRTAVRPGKEGLTPLLIFNGIGANLELVFPFIEALDP-DLEVIAFDVPGVGGSSTPR--HPYRFPGLAK 79 (276)
T ss_pred eEEEeccCCcEEEEEEecCCCCCCcEEEEeCCCcchHHHHHHHHHhcc-CceEEEECCCCCCCCCCCC--CcCcHHHHHH
Confidence 45778889999999764 32 458999999999999999999988865 7999999999999998643 4689999999
Q ss_pred HHHHHHHHhCCceEEEEEcCccHHHHHHHHHhcccccceeEEecCCCCCCCcchhhhccCcchhhhhcCCcchhhhhccC
Q 021424 83 DLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGR 162 (312)
Q Consensus 83 di~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (312)
|+.++++++++++++||||||||.+++.+|.++|++|+++|+++++........ .......+...... ...
T Consensus 80 ~~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~------~~~~~~~~~~~~~~---~~~ 150 (276)
T TIGR02240 80 LAARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPG------KPKVLMMMASPRRY---IQP 150 (276)
T ss_pred HHHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCC------chhHHHHhcCchhh---hcc
Confidence 999999999999999999999999999999999999999999986532110000 00000000000000 000
Q ss_pred CcHHHHHHHHHHhhcCCCCCCCcch-hhhhhhcCCCCCCCCCCCHHHHHHHHHhhccCCCCccccccccccccccCCCCc
Q 021424 163 LDAKTVVRNIYILFSRSEIPIAPEN-KEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLRENFSTPEV 241 (312)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (312)
....... ...+... ....+.. .......... . . ...+..... .. ........
T Consensus 151 ~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~----~--~---~~~~~~~~~-------------~~-~~~~~~~l 203 (276)
T TIGR02240 151 SHGIHIA---PDIYGGA-FRRDPELAMAHASKVRSG----G--K---LGYYWQLFA-------------GL-GWTSIHWL 203 (276)
T ss_pred ccccchh---hhhccce-eeccchhhhhhhhhcccC----C--C---chHHHHHHH-------------Hc-CCchhhHh
Confidence 0000000 0000000 0000000 0000000000 0 0 000000000 00 00000111
Q ss_pred ccccccEEEEeeCCCCCCCCCCchhhhhccchhccCCCceEEEeCCCCCCCCCcChHHHHHHHHHHhhh
Q 021424 242 IAVKVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLNK 310 (312)
Q Consensus 242 ~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~~ 310 (312)
.++++|+|+|+|++|++++.... +.+.+.+|+++++++++ ||+++.|+|++|++.|.+|+++
T Consensus 204 ~~i~~P~lii~G~~D~~v~~~~~------~~l~~~~~~~~~~~i~~-gH~~~~e~p~~~~~~i~~fl~~ 265 (276)
T TIGR02240 204 HKIQQPTLVLAGDDDPIIPLINM------RLLAWRIPNAELHIIDD-GHLFLITRAEAVAPIIMKFLAE 265 (276)
T ss_pred hcCCCCEEEEEeCCCCcCCHHHH------HHHHHhCCCCEEEEEcC-CCchhhccHHHHHHHHHHHHHH
Confidence 27899999999999999875322 34566789999999975 9999999999999999999975
No 8
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=100.00 E-value=2.5e-35 Score=253.57 Aligned_cols=269 Identities=22% Similarity=0.331 Sum_probs=162.9
Q ss_pred cccceeeeC-----CeEEEEEecCCCCceEEEECCCCCchhhHHH---HHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCC
Q 021424 4 IEHKFIKVQ-----GLNLHIAEAGADAHVVVFLHGFPEIWYSWRH---QMVGVATAGFRAIAPDCRGYGLSDPPAEPEKT 75 (312)
Q Consensus 4 ~~~~~~~~~-----g~~i~~~~~g~~~~~vlllHG~~~~~~~~~~---~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~ 75 (312)
...+++.++ |.+++|...| ++|+|||+||++++...|.. .+..|++.+|+|+++|+||||.|+.+.....+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~y~~~g-~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~ 83 (282)
T TIGR03343 5 STSKFVKINEKGLSNFRIHYNEAG-NGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQR 83 (282)
T ss_pred CcceEEEcccccccceeEEEEecC-CCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccc
Confidence 345666664 6789999988 68999999999988877753 45567677899999999999999865322222
Q ss_pred CHHHHHHHHHHHHHHhCCceEEEEEcCccHHHHHHHHHhcccccceeEEecCCCCCCCcchhhhccCcchhhhhcCCcch
Q 021424 76 SFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGR 155 (312)
Q Consensus 76 ~~~~~a~di~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (312)
+. .+++|+.++++.+++++++++||||||.+++.+|.++|++|+++|+++++...... . ...+.. ....+
T Consensus 84 ~~-~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~--~-~~~~~~-~~~~~----- 153 (282)
T TIGR03343 84 GL-VNARAVKGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSL--F-APMPME-GIKLL----- 153 (282)
T ss_pred cc-hhHHHHHHHHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccc--c-ccCchH-HHHHH-----
Confidence 22 57999999999999999999999999999999999999999999999764221000 0 000000 00000
Q ss_pred hhhhccCCcHHHHHHHHHHhhcCCCCCCCcchhhhhhh-cCCCCCCCCCCCHHHHHHHHHhhccCCCCcccccccccccc
Q 021424 156 AEADFGRLDAKTVVRNIYILFSRSEIPIAPENKEIMDL-VSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLRE 234 (312)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (312)
...+...... ........+....... ..+.... .... .........+...... .. +...
T Consensus 154 -~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~----~~----~~~~-- 213 (282)
T TIGR03343 154 -FKLYAEPSYE-TLKQMLNVFLFDQSLI---TEELLQGRWENI-----QRQPEHLKNFLISSQK----AP----LSTW-- 213 (282)
T ss_pred -HHHhcCCCHH-HHHHHHhhCccCcccC---cHHHHHhHHHHh-----hcCHHHHHHHHHhccc----cc----cccc--
Confidence 0000000000 0111000000000000 0000000 0000 0000111111100000 00 0000
Q ss_pred ccCCCCcccccccEEEEeeCCCCCCCCCCchhhhhccchhccCCCceEEEeCCCCCCCCCcChHHHHHHHHHHhhh
Q 021424 235 NFSTPEVIAVKVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLNK 310 (312)
Q Consensus 235 ~~~~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~~ 310 (312)
... ....++++|+|+|+|++|++++.+.. +.+++.+|++++++++++||+++.|+|++|++.|.+||+.
T Consensus 214 ~~~-~~l~~i~~Pvlli~G~~D~~v~~~~~------~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~i~~fl~~ 282 (282)
T TIGR03343 214 DVT-ARLGEIKAKTLVTWGRDDRFVPLDHG------LKLLWNMPDAQLHVFSRCGHWAQWEHADAFNRLVIDFLRN 282 (282)
T ss_pred hHH-HHHhhCCCCEEEEEccCCCcCCchhH------HHHHHhCCCCEEEEeCCCCcCCcccCHHHHHHHHHHHhhC
Confidence 000 01116899999999999999875433 2456678999999999999999999999999999999863
No 9
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=4.1e-35 Score=248.60 Aligned_cols=245 Identities=20% Similarity=0.263 Sum_probs=153.2
Q ss_pred eEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCc-eEEEEEcCccH
Q 021424 27 VVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLA-KVFLVAKDFGA 105 (312)
Q Consensus 27 ~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~-~~~lvGhS~Gg 105 (312)
+||||||++.+...|+.+++.|.+.+|+|+++|+||||.|+.+.. ..|++.++++|+.+++++|+.. +++||||||||
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~-~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG 83 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSN-TVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGG 83 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCcc-ccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcch
Confidence 599999999999999999999977789999999999999986432 3689999999999999999984 99999999999
Q ss_pred HHHHHHHHhcccccceeEEecCCCCCCCcchhhhcc--CcchhhhhcCCcchhhhhccCCcHHHHHHHHHHhhcCCCCCC
Q 021424 106 LTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYL--PEGFYISRWQEPGRAEADFGRLDAKTVVRNIYILFSRSEIPI 183 (312)
Q Consensus 106 ~va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (312)
.|++.+|.++|++|+++|++++.....+........ .... ...+.... .. ...........+
T Consensus 84 ~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~-~~~~~~~~~~~~------------- 147 (255)
T PLN02965 84 GSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGT-EKIWDYTF-GE-GPDKPPTGIMMK------------- 147 (255)
T ss_pred HHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhcc-ccceeeee-cc-CCCCCcchhhcC-------------
Confidence 999999999999999999998643221110000000 0000 00000000 00 000000000000
Q ss_pred CcchhhhhhhcCCCCCCCCCCCHHHHHHHHHhhccCCCCccccccccccccccCCCCcccccccEEEEeeCCCCCCCCCC
Q 021424 184 APENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLRENFSTPEVIAVKVPALLIMGDKDYFLKFPG 263 (312)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~D~~~~~~~ 263 (312)
........... ...+................ +..... .. ....++++|+++|+|++|..+++..
T Consensus 148 ---~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~-~~~~~i~vP~lvi~g~~D~~~~~~~ 211 (255)
T PLN02965 148 ---PEFVRHYYYNQ------SPLEDYTLSSKLLRPAPVRA-----FQDLDK-LP-PNPEAEKVPRVYIKTAKDNLFDPVR 211 (255)
T ss_pred ---HHHHHHHHhcC------CCHHHHHHHHHhcCCCCCcc-----hhhhhh-cc-chhhcCCCCEEEEEcCCCCCCCHHH
Confidence 00000000000 00000000000000000000 000000 00 0111589999999999999886532
Q ss_pred chhhhhccchhccCCCceEEEeCCCCCCCCCcChHHHHHHHHHHhhh
Q 021424 264 IEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLNK 310 (312)
Q Consensus 264 ~~~~~~~~~~~~~~p~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~~ 310 (312)
.+.+++.+|+++++++++|||++++|+|++|++.|.+|++.
T Consensus 212 ------~~~~~~~~~~a~~~~i~~~GH~~~~e~p~~v~~~l~~~~~~ 252 (255)
T PLN02965 212 ------QDVMVENWPPAQTYVLEDSDHSAFFSVPTTLFQYLLQAVSS 252 (255)
T ss_pred ------HHHHHHhCCcceEEEecCCCCchhhcCHHHHHHHHHHHHHH
Confidence 34577789999999999999999999999999999999865
No 10
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=100.00 E-value=1.2e-34 Score=261.07 Aligned_cols=126 Identities=21% Similarity=0.391 Sum_probs=109.0
Q ss_pred ccccceeeeCCeEEEEEecCC-C---CceEEEECCCCCchhhHHH-HHHHHh---hCCcEEEeeCCCCCCCCCCCCCCCC
Q 021424 3 QIEHKFIKVQGLNLHIAEAGA-D---AHVVVFLHGFPEIWYSWRH-QMVGVA---TAGFRAIAPDCRGYGLSDPPAEPEK 74 (312)
Q Consensus 3 ~~~~~~~~~~g~~i~~~~~g~-~---~~~vlllHG~~~~~~~~~~-~~~~l~---~~~~~vi~~Dl~G~G~S~~~~~~~~ 74 (312)
+..+++...+|.+++|...|+ + +|+|||+|||+++...|.. ++..|. ..+|+||++|+||||.|+++. ...
T Consensus 175 ~~~~~~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~-~~~ 253 (481)
T PLN03087 175 KFCTSWLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPA-DSL 253 (481)
T ss_pred ceeeeeEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCC-CCc
Confidence 345677788999999999886 2 4799999999999999985 335554 258999999999999998764 356
Q ss_pred CCHHHHHHHHH-HHHHHhCCceEEEEEcCccHHHHHHHHHhcccccceeEEecCCC
Q 021424 75 TSFQDMVDDLL-AILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPI 129 (312)
Q Consensus 75 ~~~~~~a~di~-~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~ 129 (312)
|++.++++++. .+++++++++++++||||||.+++.+|.++|++|+++|+++++.
T Consensus 254 ytl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~ 309 (481)
T PLN03087 254 YTLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPY 309 (481)
T ss_pred CCHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCc
Confidence 89999999995 89999999999999999999999999999999999999998653
No 11
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=1.2e-34 Score=246.01 Aligned_cols=252 Identities=19% Similarity=0.239 Sum_probs=151.0
Q ss_pred EEEEEecCCCCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCc
Q 021424 15 NLHIAEAGADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLA 94 (312)
Q Consensus 15 ~i~~~~~g~~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~ 94 (312)
+++|...|.++|+|||||||++++..|+.+++.|.+ +|+|+++|+||||.|+.+ ..+++.++++++.+ ++++
T Consensus 3 ~~~y~~~G~g~~~ivllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~---~~~~~~~~~~~l~~----~~~~ 74 (256)
T PRK10349 3 NIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSS-HFTLHLVDLPGFGRSRGF---GALSLADMAEAVLQ----QAPD 74 (256)
T ss_pred ccchhhcCCCCCeEEEECCCCCChhHHHHHHHHHhc-CCEEEEecCCCCCCCCCC---CCCCHHHHHHHHHh----cCCC
Confidence 478888894334799999999999999999988865 699999999999999753 35788888887664 5678
Q ss_pred eEEEEEcCccHHHHHHHHHhcccccceeEEecCCCCCCCcchhhhccCcchhhhhcCCcchhhhhccCCcHHHHHHHHHH
Q 021424 95 KVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRLDAKTVVRNIYI 174 (312)
Q Consensus 95 ~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (312)
++++|||||||.+++.+|..+|++|+++|+++++........... ..... ...+. . .. ........+..+.
T Consensus 75 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~-~~~~~-~~~~~----~--~~-~~~~~~~~~~~~~ 145 (256)
T PRK10349 75 KAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPG-IKPDV-LAGFQ----Q--QL-SDDFQRTVERFLA 145 (256)
T ss_pred CeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCc-ccHHH-HHHHH----H--HH-HhchHHHHHHHHH
Confidence 999999999999999999999999999999976422110000000 00000 00000 0 00 0000011111000
Q ss_pred hhcCCCCCCCcchhhhhhhcCCCCCCCCCCCHHHHHHHHHhhccCCCCccccccccccccccCCCCcccccccEEEEeeC
Q 021424 175 LFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLRENFSTPEVIAVKVPALLIMGD 254 (312)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~ 254 (312)
...............+....... .. . ....+......+.. + .. .....++++|||+|+|+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~-~~-~--~~~~~~~~~~~~~~----------~-----~~-~~~l~~i~~P~lii~G~ 205 (256)
T PRK10349 146 LQTMGTETARQDARALKKTVLAL-PM-P--EVDVLNGGLEILKT----------V-----DL-RQPLQNVSMPFLRLYGY 205 (256)
T ss_pred HHHccCchHHHHHHHHHHHhhcc-CC-C--cHHHHHHHHHHHHh----------C-----cc-HHHHhhcCCCeEEEecC
Confidence 00000000000000000000000 00 0 00000000000000 0 00 00111689999999999
Q ss_pred CCCCCCCCCchhhhhccchhccCCCceEEEeCCCCCCCCCcChHHHHHHHHHHhh
Q 021424 255 KDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLN 309 (312)
Q Consensus 255 ~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~ 309 (312)
+|.+++.+. .+.+++.+|+++++++|++||++++|+|++|++.|.+|-.
T Consensus 206 ~D~~~~~~~------~~~~~~~i~~~~~~~i~~~gH~~~~e~p~~f~~~l~~~~~ 254 (256)
T PRK10349 206 LDGLVPRKV------VPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLVALKQ 254 (256)
T ss_pred CCccCCHHH------HHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHHHhc
Confidence 999886432 2345667899999999999999999999999999999843
No 12
>PLN02578 hydrolase
Probab=100.00 E-value=4.7e-34 Score=252.89 Aligned_cols=118 Identities=25% Similarity=0.391 Sum_probs=108.5
Q ss_pred ceeeeCCeEEEEEecCCCCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 021424 7 KFIKVQGLNLHIAEAGADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLA 86 (312)
Q Consensus 7 ~~~~~~g~~i~~~~~g~~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~ 86 (312)
.++..+|.+++|.+.| ++|||||+||+++++..|..+++.|.+ +|+|+++|+||||.|+++. ..|+...+++|+.+
T Consensus 69 ~~~~~~~~~i~Y~~~g-~g~~vvliHG~~~~~~~w~~~~~~l~~-~~~v~~~D~~G~G~S~~~~--~~~~~~~~a~~l~~ 144 (354)
T PLN02578 69 NFWTWRGHKIHYVVQG-EGLPIVLIHGFGASAFHWRYNIPELAK-KYKVYALDLLGFGWSDKAL--IEYDAMVWRDQVAD 144 (354)
T ss_pred eEEEECCEEEEEEEcC-CCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCcc--cccCHHHHHHHHHH
Confidence 4567789999999999 689999999999999999999888865 6999999999999998753 46899999999999
Q ss_pred HHHHhCCceEEEEEcCccHHHHHHHHHhcccccceeEEecCC
Q 021424 87 ILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 128 (312)
Q Consensus 87 ~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 128 (312)
++++++.++++++||||||.+++.+|.++|++|+++|+++++
T Consensus 145 ~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~ 186 (354)
T PLN02578 145 FVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSA 186 (354)
T ss_pred HHHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCC
Confidence 999999999999999999999999999999999999999764
No 13
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=100.00 E-value=6.5e-34 Score=251.66 Aligned_cols=121 Identities=26% Similarity=0.454 Sum_probs=110.0
Q ss_pred eeeeCCeEEEEEecCC-CCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCC--CCCCHHHHHHHH
Q 021424 8 FIKVQGLNLHIAEAGA-DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEP--EKTSFQDMVDDL 84 (312)
Q Consensus 8 ~~~~~g~~i~~~~~g~-~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~--~~~~~~~~a~di 84 (312)
-++.+|++++|.+.|+ ++|+|||||||+++...|+.+++.|.+ +|+||++|+||||.|+.+... ..|++.++++|+
T Consensus 109 ~~~~~~~~~~y~~~G~~~~~~ivllHG~~~~~~~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l 187 (383)
T PLN03084 109 QASSDLFRWFCVESGSNNNPPVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSL 187 (383)
T ss_pred EEcCCceEEEEEecCCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHH
Confidence 4457999999999996 579999999999999999999988865 799999999999999876432 368999999999
Q ss_pred HHHHHHhCCceEEEEEcCccHHHHHHHHHhcccccceeEEecCCC
Q 021424 85 LAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPI 129 (312)
Q Consensus 85 ~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~ 129 (312)
.++++++++++++|||||+||.+++.+|..+|++|+++|+++++.
T Consensus 188 ~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~ 232 (383)
T PLN03084 188 ESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPL 232 (383)
T ss_pred HHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCC
Confidence 999999999999999999999999999999999999999998753
No 14
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=100.00 E-value=6.8e-34 Score=243.78 Aligned_cols=269 Identities=21% Similarity=0.305 Sum_probs=169.1
Q ss_pred cceeeeCCeEEEEEecCC-CCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 021424 6 HKFIKVQGLNLHIAEAGA-DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDL 84 (312)
Q Consensus 6 ~~~~~~~g~~i~~~~~g~-~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di 84 (312)
.++++++|.+++|.+.|+ ++|+|||+||++++...|..+++.|.. +|+|+++|+||||.|+.+.. ..+++.++++|+
T Consensus 8 ~~~~~~~~~~~~~~~~g~~~~~~vv~~hG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~l 85 (278)
T TIGR03056 8 SRRVTVGPFHWHVQDMGPTAGPLLLLLHGTGASTHSWRDLMPPLAR-SFRVVAPDLPGHGFTRAPFR-FRFTLPSMAEDL 85 (278)
T ss_pred cceeeECCEEEEEEecCCCCCCeEEEEcCCCCCHHHHHHHHHHHhh-CcEEEeecCCCCCCCCCccc-cCCCHHHHHHHH
Confidence 578899999999999986 579999999999999999999888865 79999999999999986543 368999999999
Q ss_pred HHHHHHhCCceEEEEEcCccHHHHHHHHHhcccccceeEEecCCCCCCCcchhhhccCcchhhhhcCCcchhhhhccCCc
Q 021424 85 LAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRLD 164 (312)
Q Consensus 85 ~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (312)
.++++++++++++++||||||.+++.+|.++|++++++|++++........ .....+...... ...+...........
T Consensus 86 ~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 163 (278)
T TIGR03056 86 SALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGM-AGTLFPYMARVL-ACNPFTPPMMSRGAA 163 (278)
T ss_pred HHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccc-cccccchhhHhh-hhcccchHHHHhhcc
Confidence 999999999999999999999999999999999999999987643321100 000000000000 000000000000000
Q ss_pred HHHHHHHHHHhhcCCCCCCCcchhhhhhhcCCCCCCCCCCCHHHHHHHHHhhccCC-CCccccccccccccccCCCCccc
Q 021424 165 AKTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSG-FRTALQVPYRTLRENFSTPEVIA 243 (312)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 243 (312)
....... .... .. ...+......+........ ....... ..............+
T Consensus 164 ~~~~~~~------------------~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 218 (278)
T TIGR03056 164 DQQRVER------------------LIRD--TG----SLLDKAGMTYYGRLIRSPAHVDGALSM-MAQWDLAPLNRDLPR 218 (278)
T ss_pred cCcchhH------------------Hhhc--cc----cccccchhhHHHHhhcCchhhhHHHHH-hhcccccchhhhccc
Confidence 0000000 0000 00 0000000000100000000 0000000 000000000001116
Q ss_pred ccccEEEEeeCCCCCCCCCCchhhhhccchhccCCCceEEEeCCCCCCCCCcChHHHHHHHHHHhh
Q 021424 244 VKVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLN 309 (312)
Q Consensus 244 i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~ 309 (312)
+++|+++|+|++|.+++... .+.+.+.+|+++++.++++||+++.|+|++|++.|.+|++
T Consensus 219 i~~P~lii~g~~D~~vp~~~------~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 219 ITIPLHLIAGEEDKAVPPDE------SKRAATRVPTATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred CCCCEEEEEeCCCcccCHHH------HHHHHHhccCCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 89999999999999887432 2345667899999999999999999999999999999984
No 15
>PRK06489 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-34 Score=256.78 Aligned_cols=118 Identities=20% Similarity=0.376 Sum_probs=100.1
Q ss_pred eCCeEEEEEecCC-C-------CceEEEECCCCCchhhHH--HHHHHH-------hhCCcEEEeeCCCCCCCCCCCCCC-
Q 021424 11 VQGLNLHIAEAGA-D-------AHVVVFLHGFPEIWYSWR--HQMVGV-------ATAGFRAIAPDCRGYGLSDPPAEP- 72 (312)
Q Consensus 11 ~~g~~i~~~~~g~-~-------~~~vlllHG~~~~~~~~~--~~~~~l-------~~~~~~vi~~Dl~G~G~S~~~~~~- 72 (312)
++|.+++|.+.|+ + +|+||||||++++...|. .+...| ..++|+||++|+||||.|+.+.+.
T Consensus 47 ~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~ 126 (360)
T PRK06489 47 LPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGL 126 (360)
T ss_pred cCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCC
Confidence 5899999999995 3 799999999999988886 333333 245799999999999999876432
Q ss_pred ----CCCCHHHHHHHHHHH-HHHhCCceEE-EEEcCccHHHHHHHHHhcccccceeEEecCC
Q 021424 73 ----EKTSFQDMVDDLLAI-LDHLGLAKVF-LVAKDFGALTAYMFAIQHQERVSGVITLGVP 128 (312)
Q Consensus 73 ----~~~~~~~~a~di~~~-~~~l~~~~~~-lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 128 (312)
..|++.++++|+.++ ++++++++++ +|||||||.||+.+|.++|++|+++|++++.
T Consensus 127 ~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~ 188 (360)
T PRK06489 127 RAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQ 188 (360)
T ss_pred CCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccC
Confidence 258999999999885 5889999986 8999999999999999999999999998764
No 16
>PRK10673 acyl-CoA esterase; Provisional
Probab=100.00 E-value=6.5e-34 Score=241.13 Aligned_cols=249 Identities=17% Similarity=0.252 Sum_probs=157.0
Q ss_pred EEEEEecC---C-CCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 021424 15 NLHIAEAG---A-DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDH 90 (312)
Q Consensus 15 ~i~~~~~g---~-~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~ 90 (312)
+++|...+ + ++|+|||+||++++...|..++..|.+ +|+|+++|+||||.|+.+ ..+++.++++|+.+++++
T Consensus 2 ~~~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~---~~~~~~~~~~d~~~~l~~ 77 (255)
T PRK10673 2 KLNIRAQTAQNPHNNSPIVLVHGLFGSLDNLGVLARDLVN-DHDIIQVDMRNHGLSPRD---PVMNYPAMAQDLLDTLDA 77 (255)
T ss_pred cceeeeccCCCCCCCCCEEEECCCCCchhHHHHHHHHHhh-CCeEEEECCCCCCCCCCC---CCCCHHHHHHHHHHHHHH
Confidence 35555432 2 578999999999999999999888865 799999999999999864 358999999999999999
Q ss_pred hCCceEEEEEcCccHHHHHHHHHhcccccceeEEecCCCCCCCcchhhhccCcchhhhhcCCcchhhhhccCCcHHHHHH
Q 021424 91 LGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRLDAKTVVR 170 (312)
Q Consensus 91 l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (312)
++.+++++|||||||.+++.+|.++|++|+++|++++............ ....+... ... .........
T Consensus 78 l~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~------~~~~~~~~--~~~---~~~~~~~~~ 146 (255)
T PRK10673 78 LQIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDE------IFAAINAV--SEA---GATTRQQAA 146 (255)
T ss_pred cCCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHH------HHHHHHHh--hhc---ccccHHHHH
Confidence 9999999999999999999999999999999999975322111000000 00000000 000 000000000
Q ss_pred HHHHhhcCCCCCCCcchhhhhhhcCCCCCCCCC-CCHHHHHHHHHhhccCCCCccccccccccccccCCCCcccccccEE
Q 021424 171 NIYILFSRSEIPIAPENKEIMDLVSDSTPLPPW-FTEEDLAAYGALYEKSGFRTALQVPYRTLRENFSTPEVIAVKVPAL 249 (312)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l 249 (312)
..... . ... ...............+ .... ..... +.... ......++++|+|
T Consensus 147 ~~~~~--~----~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~-------------~~~~~---~~~~~~~~~~P~l 199 (255)
T PRK10673 147 AIMRQ--H----LNE--EGVIQFLLKSFVDGEWRFNVP---VLWDQ-------------YPHIV---GWEKIPAWPHPAL 199 (255)
T ss_pred HHHHH--h----cCC--HHHHHHHHhcCCcceeEeeHH---HHHHh-------------HHHHh---CCcccCCCCCCeE
Confidence 00000 0 000 0000000000000000 0000 00000 00000 0001116789999
Q ss_pred EEeeCCCCCCCCCCchhhhhccchhccCCCceEEEeCCCCCCCCCcChHHHHHHHHHHhhhc
Q 021424 250 LIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLNKH 311 (312)
Q Consensus 250 ~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~~~ 311 (312)
+|+|++|+.++.+. .+.+++.+|++++++++++||++++|+|++|++.|.+||.++
T Consensus 200 ~i~G~~D~~~~~~~------~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~~ 255 (255)
T PRK10673 200 FIRGGNSPYVTEAY------RDDLLAQFPQARAHVIAGAGHWVHAEKPDAVLRAIRRYLNDK 255 (255)
T ss_pred EEECCCCCCCCHHH------HHHHHHhCCCcEEEEeCCCCCeeeccCHHHHHHHHHHHHhcC
Confidence 99999999876422 234567789999999999999999999999999999999764
No 17
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=100.00 E-value=1.6e-32 Score=230.86 Aligned_cols=99 Identities=23% Similarity=0.294 Sum_probs=90.2
Q ss_pred CceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEcCcc
Q 021424 25 AHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFG 104 (312)
Q Consensus 25 ~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~~~~lvGhS~G 104 (312)
+|+|||+||+++++..|+.+++.| + +|+|+++|+||||.|+.+. ..++.++++|+.+++++++++++++||||||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~---~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~G 76 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEAL-P-DYPRLYIDLPGHGGSAAIS---VDGFADVSRLLSQTLQSYNILPYWLVGYSLG 76 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHc-C-CCCEEEecCCCCCCCCCcc---ccCHHHHHHHHHHHHHHcCCCCeEEEEECHH
Confidence 689999999999999999999887 4 6999999999999998653 3489999999999999999999999999999
Q ss_pred HHHHHHHHHhcccc-cceeEEecCC
Q 021424 105 ALTAYMFAIQHQER-VSGVITLGVP 128 (312)
Q Consensus 105 g~va~~~a~~~p~~-v~~lv~~~~~ 128 (312)
|.+++.+|.++|++ |+++|+++++
T Consensus 77 g~va~~~a~~~~~~~v~~lvl~~~~ 101 (242)
T PRK11126 77 GRIAMYYACQGLAGGLCGLIVEGGN 101 (242)
T ss_pred HHHHHHHHHhCCcccccEEEEeCCC
Confidence 99999999999765 9999988654
No 18
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=100.00 E-value=2.6e-33 Score=247.34 Aligned_cols=118 Identities=26% Similarity=0.354 Sum_probs=99.4
Q ss_pred ceeeeCCeEEEEEecCCCCceEEEECCCCCchh------------hHHHHHH---HHhhCCcEEEeeCCCCCCCCCCCCC
Q 021424 7 KFIKVQGLNLHIAEAGADAHVVVFLHGFPEIWY------------SWRHQMV---GVATAGFRAIAPDCRGYGLSDPPAE 71 (312)
Q Consensus 7 ~~~~~~g~~i~~~~~g~~~~~vlllHG~~~~~~------------~~~~~~~---~l~~~~~~vi~~Dl~G~G~S~~~~~ 71 (312)
.+.+++|.+++|.+.|++++|+|||||+.++.. .|..++. .|..++|+||++|+||||.|..
T Consensus 39 ~~~~~~~~~l~y~~~G~~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~--- 115 (343)
T PRK08775 39 RHAGLEDLRLRYELIGPAGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLD--- 115 (343)
T ss_pred cCCCCCCceEEEEEeccCCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCC---
Confidence 445568999999999964667888877766655 5887775 4644579999999999998842
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCceE-EEEEcCccHHHHHHHHHhcccccceeEEecCC
Q 021424 72 PEKTSFQDMVDDLLAILDHLGLAKV-FLVAKDFGALTAYMFAIQHQERVSGVITLGVP 128 (312)
Q Consensus 72 ~~~~~~~~~a~di~~~~~~l~~~~~-~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 128 (312)
..+++.++++|+.+++++|+++++ ++|||||||.||+.+|.++|++|+++|++++.
T Consensus 116 -~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~ 172 (343)
T PRK08775 116 -VPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGA 172 (343)
T ss_pred -CCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECcc
Confidence 357899999999999999999875 79999999999999999999999999999864
No 19
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=100.00 E-value=1.5e-32 Score=237.89 Aligned_cols=256 Identities=21% Similarity=0.328 Sum_probs=154.8
Q ss_pred CCceEEEECCCCCchhhHHHHHHHHhhC-CcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEcC
Q 021424 24 DAHVVVFLHGFPEIWYSWRHQMVGVATA-GFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKD 102 (312)
Q Consensus 24 ~~~~vlllHG~~~~~~~~~~~~~~l~~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~~~~lvGhS 102 (312)
++|+||+||||+++..+|++++..|... +++|+++|++|||+|++.+.+..|+...+++.+..++.+.+.+++++||||
T Consensus 57 ~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~~~~lvghS 136 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVEPVSLVGHS 136 (326)
T ss_pred CCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCcceEEEEeC
Confidence 4789999999999999999998887653 399999999999977665555679999999999999999999999999999
Q ss_pred ccHHHHHHHHHhcccccceeEEec---CCCCCCCcc--hhhhccCcchhhhhcCCcchhhhhccCCcHHHHHHHHHHhhc
Q 021424 103 FGALTAYMFAIQHQERVSGVITLG---VPILPPGPI--EFHKYLPEGFYISRWQEPGRAEADFGRLDAKTVVRNIYILFS 177 (312)
Q Consensus 103 ~Gg~va~~~a~~~p~~v~~lv~~~---~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (312)
+||.+|..+|+.+|+.|+++|+++ ++....... ........-........+.. .......... ....
T Consensus 137 ~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~------~~~~~~~~~~--~~~~ 208 (326)
T KOG1454|consen 137 LGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLS------LTEPVRLVSE--GLLR 208 (326)
T ss_pred cHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccc------cccchhheeH--hhhc
Confidence 999999999999999999999554 332211100 00000000000000000000 0000000000 0000
Q ss_pred CCCC---CCCcchhhhhhhcCCCCCCCCCCCHHHHHHHHHhhccCCCCcccccccccccc--ccCCCCccccc-ccEEEE
Q 021424 178 RSEI---PIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLRE--NFSTPEVIAVK-VPALLI 251 (312)
Q Consensus 178 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~-~P~l~i 251 (312)
.... ......+.....+.... ...+.+...... +..... ........++. ||+|++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~pvlii 270 (326)
T KOG1454|consen 209 CLKVVYTDPSRLLEKLLHLLSRPV--------------KEHFHRDARLSL----FLELLGFDENLLSLIKKIWKCPVLII 270 (326)
T ss_pred ceeeeccccccchhhhhhheeccc--------------ccchhhhheeeE----EEeccCccchHHHhhccccCCceEEE
Confidence 0000 00000000000000000 000000000000 000000 01111111555 999999
Q ss_pred eeCCCCCCCCCCchhhhhccchhccCCCceEEEeCCCCCCCCCcChHHHHHHHHHHhhhc
Q 021424 252 MGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLNKH 311 (312)
Q Consensus 252 ~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~~~ 311 (312)
||++|+++|.+. +..+++.+||++++++++|||.+|+|.|++|++.|..|+..+
T Consensus 271 ~G~~D~~~p~~~------~~~~~~~~pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 271 WGDKDQIVPLEL------AEELKKKLPNAELVEIPGAGHLPHLERPEEVAALLRSFIARL 324 (326)
T ss_pred EcCcCCccCHHH------HHHHHhhCCCceEEEeCCCCcccccCCHHHHHHHHHHHHHHh
Confidence 999999998642 235566679999999999999999999999999999999764
No 20
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=100.00 E-value=1.4e-31 Score=229.86 Aligned_cols=121 Identities=24% Similarity=0.422 Sum_probs=101.5
Q ss_pred eeeeCCeEEEEEecCC--CCceEEEECCCCCchhhHHHHHHHHhh-CCcEEEeeCCCCCCCCCCCCCCC-CCCHHHHHHH
Q 021424 8 FIKVQGLNLHIAEAGA--DAHVVVFLHGFPEIWYSWRHQMVGVAT-AGFRAIAPDCRGYGLSDPPAEPE-KTSFQDMVDD 83 (312)
Q Consensus 8 ~~~~~g~~i~~~~~g~--~~~~vlllHG~~~~~~~~~~~~~~l~~-~~~~vi~~Dl~G~G~S~~~~~~~-~~~~~~~a~d 83 (312)
+++++|.++.|...|+ .+++|||+||++++...|...+..++. .||+|+++|+||||.|+.+.... .+++.++++|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~ 85 (288)
T TIGR01250 6 IITVDGGYHLFTKTGGEGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDE 85 (288)
T ss_pred eecCCCCeEEEEeccCCCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHH
Confidence 6777888888987774 368999999997766655444444444 48999999999999998653322 4899999999
Q ss_pred HHHHHHHhCCceEEEEEcCccHHHHHHHHHhcccccceeEEecCC
Q 021424 84 LLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 128 (312)
Q Consensus 84 i~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 128 (312)
+.+++++++.++++++||||||.+++.+|..+|++++++|++++.
T Consensus 86 ~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (288)
T TIGR01250 86 LEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSML 130 (288)
T ss_pred HHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEeccc
Confidence 999999999999999999999999999999999999999988754
No 21
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=100.00 E-value=6.7e-32 Score=228.25 Aligned_cols=252 Identities=23% Similarity=0.344 Sum_probs=157.1
Q ss_pred EEEEecCC---CCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC
Q 021424 16 LHIAEAGA---DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLG 92 (312)
Q Consensus 16 i~~~~~g~---~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~ 92 (312)
++|...|+ ++|+|||+|||++++..|...++.|.. +|+|+++|+||||.|+.+. +..+++.++++|+.+++++++
T Consensus 1 ~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~~~~~~i~~~~ 78 (257)
T TIGR03611 1 MHYELHGPPDADAPVVVLSSGLGGSGSYWAPQLDVLTQ-RFHVVTYDHRGTGRSPGEL-PPGYSIAHMADDVLQLLDALN 78 (257)
T ss_pred CEEEEecCCCCCCCEEEEEcCCCcchhHHHHHHHHHHh-ccEEEEEcCCCCCCCCCCC-cccCCHHHHHHHHHHHHHHhC
Confidence 46777773 578999999999999999988877754 7999999999999998643 356899999999999999999
Q ss_pred CceEEEEEcCccHHHHHHHHHhcccccceeEEecCCCCCCCcchhhhccCcchhhhhcCCcchhhhhccCCcHHHHHHHH
Q 021424 93 LAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRLDAKTVVRNI 172 (312)
Q Consensus 93 ~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (312)
..+++++||||||.+++.+|+++|++|+++|++++.... ................... ........
T Consensus 79 ~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~ 144 (257)
T TIGR03611 79 IERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRP-DPHTRRCFDVRIALLQHAG-------------PEAYVHAQ 144 (257)
T ss_pred CCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCC-ChhHHHHHHHHHHHHhccC-------------cchhhhhh
Confidence 999999999999999999999999999999998753221 1100000000000000000 00000000
Q ss_pred -HHhhcCCCCCCCcchhhhhhhcCCCCCCCCCCCHHH-HHHHHHhhccCCCCccccccccccccccCCCCcccccccEEE
Q 021424 173 -YILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEED-LAAYGALYEKSGFRTALQVPYRTLRENFSTPEVIAVKVPALL 250 (312)
Q Consensus 173 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~ 250 (312)
...+...... ............. .......+. .... ..... + ... ....++++|+++
T Consensus 145 ~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~----------~-----~~~-~~~~~i~~P~l~ 203 (257)
T TIGR03611 145 ALFLYPADWIS--ENAARLAADEAHA--LAHFPGKANVLRRI-NALEA----------F-----DVS-ARLDRIQHPVLL 203 (257)
T ss_pred hhhhccccHhh--ccchhhhhhhhhc--ccccCccHHHHHHH-HHHHc----------C-----CcH-HHhcccCccEEE
Confidence 0000000000 0000000000000 000000000 0000 00000 0 000 011168999999
Q ss_pred EeeCCCCCCCCCCchhhhhccchhccCCCceEEEeCCCCCCCCCcChHHHHHHHHHHhhh
Q 021424 251 IMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLNK 310 (312)
Q Consensus 251 i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~~ 310 (312)
++|++|.+++.+.. +.+.+.+|+++++.++++||++++|+|++|++.|.+||++
T Consensus 204 i~g~~D~~~~~~~~------~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 204 IANRDDMLVPYTQS------LRLAAALPNAQLKLLPYGGHASNVTDPETFNRALLDFLKT 257 (257)
T ss_pred EecCcCcccCHHHH------HHHHHhcCCceEEEECCCCCCccccCHHHHHHHHHHHhcC
Confidence 99999999875432 2345567899999999999999999999999999999863
No 22
>PRK10749 lysophospholipase L2; Provisional
Probab=99.98 E-value=6.7e-31 Score=230.70 Aligned_cols=122 Identities=21% Similarity=0.294 Sum_probs=106.7
Q ss_pred ceeeeCCeEEEEEecCC--CCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCC----CCCCHHHH
Q 021424 7 KFIKVQGLNLHIAEAGA--DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEP----EKTSFQDM 80 (312)
Q Consensus 7 ~~~~~~g~~i~~~~~g~--~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~----~~~~~~~~ 80 (312)
.++..+|.+++|...|+ .+++||++||++++...|..++..|++.||+|+++|+||||.|+.+... ..+++.++
T Consensus 34 ~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~ 113 (330)
T PRK10749 34 EFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDY 113 (330)
T ss_pred EEEcCCCCEEEEEEccCCCCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHH
Confidence 45667999999998774 4578999999999998999998888888999999999999999864221 23689999
Q ss_pred HHHHHHHHHHh----CCceEEEEEcCccHHHHHHHHHhcccccceeEEecCC
Q 021424 81 VDDLLAILDHL----GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 128 (312)
Q Consensus 81 a~di~~~~~~l----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 128 (312)
++|+.++++.+ +..+++++||||||.+++.+|+.+|++++++|++++.
T Consensus 114 ~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~ 165 (330)
T PRK10749 114 VDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPM 165 (330)
T ss_pred HHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECch
Confidence 99999999987 6789999999999999999999999999999998754
No 23
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.98 E-value=2.9e-31 Score=234.92 Aligned_cols=120 Identities=21% Similarity=0.336 Sum_probs=102.1
Q ss_pred eeeeCCeEEEEEecCC----CCceEEEECCCCCchhh-HHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHH
Q 021424 8 FIKVQGLNLHIAEAGA----DAHVVVFLHGFPEIWYS-WRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVD 82 (312)
Q Consensus 8 ~~~~~g~~i~~~~~g~----~~~~vlllHG~~~~~~~-~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~ 82 (312)
+++.+|.+++|..+++ .+++|||+|||++++.. |..++..|.+.||+|+++|+||||.|+.+. ...+++.++++
T Consensus 66 ~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~-~~~~~~~~~~~ 144 (349)
T PLN02385 66 EVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLH-GYIPSFDDLVD 144 (349)
T ss_pred EEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCC-CCcCCHHHHHH
Confidence 4445899999988775 24689999999988654 678888888779999999999999998642 23458999999
Q ss_pred HHHHHHHHhCCc------eEEEEEcCccHHHHHHHHHhcccccceeEEecCC
Q 021424 83 DLLAILDHLGLA------KVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 128 (312)
Q Consensus 83 di~~~~~~l~~~------~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 128 (312)
|+.++++.++.+ +++|+||||||.|++.+|.++|++++++|++++.
T Consensus 145 dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~ 196 (349)
T PLN02385 145 DVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPM 196 (349)
T ss_pred HHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEeccc
Confidence 999999988653 7999999999999999999999999999999864
No 24
>PRK07581 hypothetical protein; Validated
Probab=99.98 E-value=5.3e-32 Score=238.87 Aligned_cols=118 Identities=15% Similarity=0.298 Sum_probs=92.0
Q ss_pred eCCeEEEEEecCC---CC-ceEEEECCCCCchhhHHHHH---HHHhhCCcEEEeeCCCCCCCCCCCCCC-CCCCHHH---
Q 021424 11 VQGLNLHIAEAGA---DA-HVVVFLHGFPEIWYSWRHQM---VGVATAGFRAIAPDCRGYGLSDPPAEP-EKTSFQD--- 79 (312)
Q Consensus 11 ~~g~~i~~~~~g~---~~-~~vlllHG~~~~~~~~~~~~---~~l~~~~~~vi~~Dl~G~G~S~~~~~~-~~~~~~~--- 79 (312)
++|.+++|.+.|+ ++ |+||++||++++...|..++ +.|.+.+|+||++|+||||.|+.+... ..|++.+
T Consensus 23 ~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 102 (339)
T PRK07581 23 LPDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPH 102 (339)
T ss_pred cCCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCc
Confidence 4789999999984 23 56777777777776776443 356556799999999999999865421 2344433
Q ss_pred --HHHHHHH----HHHHhCCce-EEEEEcCccHHHHHHHHHhcccccceeEEecCC
Q 021424 80 --MVDDLLA----ILDHLGLAK-VFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 128 (312)
Q Consensus 80 --~a~di~~----~~~~l~~~~-~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 128 (312)
+++|+.+ ++++|++++ ++||||||||.||+.+|.+||++|+++|++++.
T Consensus 103 ~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~ 158 (339)
T PRK07581 103 VTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGT 158 (339)
T ss_pred eeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecC
Confidence 5677765 778999999 589999999999999999999999999999754
No 25
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.98 E-value=2.1e-30 Score=221.34 Aligned_cols=118 Identities=17% Similarity=0.294 Sum_probs=104.0
Q ss_pred eeCCeEEEEEecCCCCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 021424 10 KVQGLNLHIAEAGADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILD 89 (312)
Q Consensus 10 ~~~g~~i~~~~~g~~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~ 89 (312)
+-||.+++|.+-+.++|+|||+||++.+...|..++..|.+.||+|+++|+||||.|.... ...++++++++++.++++
T Consensus 3 ~~~~~~~~~~~~~~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~-~~~~~~~~~~~~l~~~i~ 81 (273)
T PLN02211 3 EENGEEVTDMKPNRQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDA-DSVTTFDEYNKPLIDFLS 81 (273)
T ss_pred cccccccccccccCCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCc-ccCCCHHHHHHHHHHHHH
Confidence 4489999998864478999999999999999999988887778999999999999985432 234799999999999999
Q ss_pred HhC-CceEEEEEcCccHHHHHHHHHhcccccceeEEecCC
Q 021424 90 HLG-LAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 128 (312)
Q Consensus 90 ~l~-~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 128 (312)
.++ .++++||||||||.++..++..+|++|+++|++++.
T Consensus 82 ~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~ 121 (273)
T PLN02211 82 SLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAAT 121 (273)
T ss_pred hcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccc
Confidence 995 589999999999999999999999999999999754
No 26
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.98 E-value=6.3e-31 Score=220.93 Aligned_cols=249 Identities=24% Similarity=0.348 Sum_probs=157.1
Q ss_pred EEEEEecCC--CCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC
Q 021424 15 NLHIAEAGA--DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLG 92 (312)
Q Consensus 15 ~i~~~~~g~--~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~ 92 (312)
+++|...|+ ++|+|||+||++++...|..+++.|. .+|+|+++|+||||.|+.+. ..+++.++++|+.++++.++
T Consensus 1 ~~~~~~~g~~~~~~~li~~hg~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~--~~~~~~~~~~~~~~~i~~~~ 77 (251)
T TIGR02427 1 RLHYRLDGAADGAPVLVFINSLGTDLRMWDPVLPALT-PDFRVLRYDKRGHGLSDAPE--GPYSIEDLADDVLALLDHLG 77 (251)
T ss_pred CceEEeecCCCCCCeEEEEcCcccchhhHHHHHHHhh-cccEEEEecCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHhC
Confidence 367777775 46789999999999999999888775 58999999999999997543 46799999999999999999
Q ss_pred CceEEEEEcCccHHHHHHHHHhcccccceeEEecCCCCCCCcchhhhccCcchhhhhcCCcchhhhhccCCcHHHHHHHH
Q 021424 93 LAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRLDAKTVVRNI 172 (312)
Q Consensus 93 ~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (312)
.++++++||||||.+++.+|..+|++++++|+++++............ ...+... .........
T Consensus 78 ~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~------~~~~~~~----------~~~~~~~~~ 141 (251)
T TIGR02427 78 IERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNAR------IAAVRAE----------GLAALADAV 141 (251)
T ss_pred CCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHH------Hhhhhhc----------cHHHHHHHH
Confidence 999999999999999999999999999999988754321111000000 0000000 000000000
Q ss_pred HHhhcCCCCCCCcchhhhhhhcCCCCCCCCCCCHHHHHHHHHhhccCCCCccccccccccccccCCCCcccccccEEEEe
Q 021424 173 YILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLRENFSTPEVIAVKVPALLIM 252 (312)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~ 252 (312)
...+...... .. .....+.+...+........... +.............++++|+++++
T Consensus 142 ~~~~~~~~~~-~~-------------------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Pvlii~ 200 (251)
T TIGR02427 142 LERWFTPGFR-EA-------------------HPARLDLYRNMLVRQPPDGYAGC-CAAIRDADFRDRLGAIAVPTLCIA 200 (251)
T ss_pred HHHHcccccc-cC-------------------ChHHHHHHHHHHHhcCHHHHHHH-HHHHhcccHHHHhhhcCCCeEEEE
Confidence 0000000000 00 00000011000000000000000 000000000001116889999999
Q ss_pred eCCCCCCCCCCchhhhhccchhccCCCceEEEeCCCCCCCCCcChHHHHHHHHHHhh
Q 021424 253 GDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLN 309 (312)
Q Consensus 253 G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~ 309 (312)
|++|.+++.+... .+.+..|+.+++.++++||++++|+|+++++.|.+|++
T Consensus 201 g~~D~~~~~~~~~------~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 201 GDQDGSTPPELVR------EIADLVPGARFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred eccCCcCChHHHH------HHHHhCCCceEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 9999998754322 34556788999999999999999999999999999984
No 27
>PHA02857 monoglyceride lipase; Provisional
Probab=99.97 E-value=6.9e-30 Score=219.14 Aligned_cols=120 Identities=16% Similarity=0.164 Sum_probs=99.8
Q ss_pred eeeeCCeEEEEEecCC---CCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 021424 8 FIKVQGLNLHIAEAGA---DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDL 84 (312)
Q Consensus 8 ~~~~~g~~i~~~~~g~---~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di 84 (312)
+++.||.+++|..+-+ ..+.|+++||+++++..|..+++.|.+.||+|+++|+||||.|+... ....++.++++|+
T Consensus 5 ~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~-~~~~~~~~~~~d~ 83 (276)
T PHA02857 5 MFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEK-MMIDDFGVYVRDV 83 (276)
T ss_pred eecCCCCEEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCcc-CCcCCHHHHHHHH
Confidence 5666999999976554 23457777999999999999999998889999999999999997532 2234677788888
Q ss_pred HHHHHHh----CCceEEEEEcCccHHHHHHHHHhcccccceeEEecCC
Q 021424 85 LAILDHL----GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 128 (312)
Q Consensus 85 ~~~~~~l----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 128 (312)
.+.++.+ ...+++++||||||.+++.+|.++|++++++|++++.
T Consensus 84 ~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~ 131 (276)
T PHA02857 84 VQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPL 131 (276)
T ss_pred HHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccc
Confidence 8887765 3468999999999999999999999999999999764
No 28
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.97 E-value=1.1e-30 Score=218.91 Aligned_cols=241 Identities=17% Similarity=0.175 Sum_probs=142.4
Q ss_pred ceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEcCccH
Q 021424 26 HVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGA 105 (312)
Q Consensus 26 ~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~~~~lvGhS~Gg 105 (312)
|+|||+||+++++..|..+++.|.+ +|+|+++|+||||.|+.. ..+++.++++++.+++ .+++++|||||||
T Consensus 5 ~~iv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~---~~~~~~~~~~~~~~~~----~~~~~lvG~S~Gg 76 (245)
T TIGR01738 5 VHLVLIHGWGMNAEVFRCLDEELSA-HFTLHLVDLPGHGRSRGF---GPLSLADAAEAIAAQA----PDPAIWLGWSLGG 76 (245)
T ss_pred ceEEEEcCCCCchhhHHHHHHhhcc-CeEEEEecCCcCccCCCC---CCcCHHHHHHHHHHhC----CCCeEEEEEcHHH
Confidence 8999999999999999999988865 799999999999999753 3468888888877654 2699999999999
Q ss_pred HHHHHHHHhcccccceeEEecCCCCCCCcchhhhccCcchhhhhcCCcchhhhhccCCcHHHHHHHHHHhhcCCCCCCCc
Q 021424 106 LTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRLDAKTVVRNIYILFSRSEIPIAP 185 (312)
Q Consensus 106 ~va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (312)
.+++.+|.++|++++++|++++.........+...... .....+.. .. ........................
T Consensus 77 ~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~-~~~~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~ 148 (245)
T TIGR01738 77 LVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKP-DVLTGFQQ------QL-SDDYQRTIERFLALQTLGTPTARQ 148 (245)
T ss_pred HHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCH-HHHHHHHH------Hh-hhhHHHHHHHHHHHHHhcCCccch
Confidence 99999999999999999998764321100000000000 00000000 00 000000000000000000000000
Q ss_pred chhhhhhhcCCCCCCCCCCCHHHHHHHHHhhccCCCCccccccccccccccCCCCcccccccEEEEeeCCCCCCCCCCch
Q 021424 186 ENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLRENFSTPEVIAVKVPALLIMGDKDYFLKFPGIE 265 (312)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~D~~~~~~~~~ 265 (312)
....+....... ..+ ....+......+. . ........++++|+++|+|++|.+++.+..
T Consensus 149 ~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~-------------~---~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~- 207 (245)
T TIGR01738 149 DARALKQTLLAR-PTP---NVQVLQAGLEILA-------------T---VDLRQPLQNISVPFLRLYGYLDGLVPAKVV- 207 (245)
T ss_pred HHHHHHHHhhcc-CCC---CHHHHHHHHHHhh-------------c---ccHHHHHhcCCCCEEEEeecCCcccCHHHH-
Confidence 000000000000 000 0000000000000 0 000001116899999999999998875322
Q ss_pred hhhhccchhccCCCceEEEeCCCCCCCCCcChHHHHHHHHHHh
Q 021424 266 DYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFL 308 (312)
Q Consensus 266 ~~~~~~~~~~~~p~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl 308 (312)
+.+.+..|+++++++|++||++++|+|++|++.|.+|+
T Consensus 208 -----~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 208 -----PYLDKLAPHSELYIFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred -----HHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHhhC
Confidence 23456789999999999999999999999999999996
No 29
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.97 E-value=2.5e-31 Score=235.41 Aligned_cols=119 Identities=21% Similarity=0.382 Sum_probs=99.7
Q ss_pred eCCeEEEEEecCC----CCceEEEECCCCCchh-----------hHHHHHH---HHhhCCcEEEeeCCCC--CCCCCCC-
Q 021424 11 VQGLNLHIAEAGA----DAHVVVFLHGFPEIWY-----------SWRHQMV---GVATAGFRAIAPDCRG--YGLSDPP- 69 (312)
Q Consensus 11 ~~g~~i~~~~~g~----~~~~vlllHG~~~~~~-----------~~~~~~~---~l~~~~~~vi~~Dl~G--~G~S~~~- 69 (312)
++|.+|+|.+.|+ ++++|||+||+++++. .|+.++. .|..++|+||++|+|| ||.|...
T Consensus 13 ~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~ 92 (351)
T TIGR01392 13 LSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSS 92 (351)
T ss_pred cCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCC
Confidence 5889999999984 3579999999999774 3777652 5656789999999999 6665431
Q ss_pred --CC-------CCCCCHHHHHHHHHHHHHHhCCce-EEEEEcCccHHHHHHHHHhcccccceeEEecCCC
Q 021424 70 --AE-------PEKTSFQDMVDDLLAILDHLGLAK-VFLVAKDFGALTAYMFAIQHQERVSGVITLGVPI 129 (312)
Q Consensus 70 --~~-------~~~~~~~~~a~di~~~~~~l~~~~-~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~ 129 (312)
+. ...|++.++++|+.++++++++++ ++++||||||.+++.+|.++|++|+++|++++..
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (351)
T TIGR01392 93 INPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSA 162 (351)
T ss_pred CCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCC
Confidence 11 125899999999999999999999 9999999999999999999999999999998653
No 30
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=5.2e-30 Score=214.24 Aligned_cols=126 Identities=22% Similarity=0.356 Sum_probs=105.6
Q ss_pred cceeee-CCeEEEEEecCC---CCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCC--CCCHHH
Q 021424 6 HKFIKV-QGLNLHIAEAGA---DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPE--KTSFQD 79 (312)
Q Consensus 6 ~~~~~~-~g~~i~~~~~g~---~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~--~~~~~~ 79 (312)
.+++.+ ++.+++..+..+ ++.|+|||||++++...|....+.|+. .++|+++|++|+|+|++|.-+. .-....
T Consensus 67 ~~~v~i~~~~~iw~~~~~~~~~~~~plVliHGyGAg~g~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~~e~~ 145 (365)
T KOG4409|consen 67 KKYVRIPNGIEIWTITVSNESANKTPLVLIHGYGAGLGLFFRNFDDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTTAEKE 145 (365)
T ss_pred eeeeecCCCceeEEEeecccccCCCcEEEEeccchhHHHHHHhhhhhhh-cCceEEecccCCCCCCCCCCCCCcccchHH
Confidence 345555 555666655442 578999999999999999999999987 7999999999999999985332 234457
Q ss_pred HHHHHHHHHHHhCCceEEEEEcCccHHHHHHHHHhcccccceeEEecCCCCCC
Q 021424 80 MVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPP 132 (312)
Q Consensus 80 ~a~di~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~~~ 132 (312)
+++-|++..+..++++.+|||||+||++|..||.+||++|+.||++++...+.
T Consensus 146 fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~ 198 (365)
T KOG4409|consen 146 FVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPE 198 (365)
T ss_pred HHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEeccccccc
Confidence 89999999999999999999999999999999999999999999998765543
No 31
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.97 E-value=1e-30 Score=233.41 Aligned_cols=119 Identities=20% Similarity=0.348 Sum_probs=98.3
Q ss_pred eCCeEEEEEecCC----CCceEEEECCCCCchhh-------------HHHHHH---HHhhCCcEEEeeCCCCC-CCCCCC
Q 021424 11 VQGLNLHIAEAGA----DAHVVVFLHGFPEIWYS-------------WRHQMV---GVATAGFRAIAPDCRGY-GLSDPP 69 (312)
Q Consensus 11 ~~g~~i~~~~~g~----~~~~vlllHG~~~~~~~-------------~~~~~~---~l~~~~~~vi~~Dl~G~-G~S~~~ 69 (312)
++|.+++|...|. ++|+|||+||+++++.. |..++. .|...+|+||++|+||+ |.|+.+
T Consensus 30 ~~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~ 109 (379)
T PRK00175 30 LPPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGP 109 (379)
T ss_pred cCCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCC
Confidence 4788899999984 26899999999999985 666542 44356899999999993 555432
Q ss_pred CC--C----------CCCCHHHHHHHHHHHHHHhCCce-EEEEEcCccHHHHHHHHHhcccccceeEEecCCC
Q 021424 70 AE--P----------EKTSFQDMVDDLLAILDHLGLAK-VFLVAKDFGALTAYMFAIQHQERVSGVITLGVPI 129 (312)
Q Consensus 70 ~~--~----------~~~~~~~~a~di~~~~~~l~~~~-~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~ 129 (312)
.. + ..|++.++++|+.+++++|++++ +++|||||||.+++.+|.++|++|+++|++++..
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 182 (379)
T PRK00175 110 SSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSA 182 (379)
T ss_pred CCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCc
Confidence 11 0 26899999999999999999999 5999999999999999999999999999998653
No 32
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.97 E-value=7.9e-30 Score=213.91 Aligned_cols=103 Identities=36% Similarity=0.569 Sum_probs=94.4
Q ss_pred CceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHH-HHHHHHHhCCceEEEEEcCc
Q 021424 25 AHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDD-LLAILDHLGLAKVFLVAKDF 103 (312)
Q Consensus 25 ~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~d-i~~~~~~l~~~~~~lvGhS~ 103 (312)
+|+|||+||++++...|..+++.|. .+|+|+++|+||||.|+.+.....+++++++++ +.++++.++.++++++||||
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 79 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPFFLVGYSM 79 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeEEEEEecc
Confidence 4789999999999999999999987 689999999999999987655457899999999 88899999999999999999
Q ss_pred cHHHHHHHHHhcccccceeEEecCC
Q 021424 104 GALTAYMFAIQHQERVSGVITLGVP 128 (312)
Q Consensus 104 Gg~va~~~a~~~p~~v~~lv~~~~~ 128 (312)
||.+++.+|.++|++|++++++++.
T Consensus 80 Gg~ia~~~a~~~~~~v~~lil~~~~ 104 (251)
T TIGR03695 80 GGRIALYYALQYPERVQGLILESGS 104 (251)
T ss_pred HHHHHHHHHHhCchheeeeEEecCC
Confidence 9999999999999999999998754
No 33
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.97 E-value=1.6e-29 Score=225.92 Aligned_cols=259 Identities=23% Similarity=0.378 Sum_probs=163.2
Q ss_pred ceeeeCCeEEEEEecCC-CCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 021424 7 KFIKVQGLNLHIAEAGA-DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLL 85 (312)
Q Consensus 7 ~~~~~~g~~i~~~~~g~-~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~ 85 (312)
..+.+++.+++|...|+ ++|+|||+||++++...|..++..|.. +|+|+++|+||||.|+... ..+++.++++++.
T Consensus 112 ~~~~~~~~~i~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~G~s~~~~--~~~~~~~~~~~~~ 188 (371)
T PRK14875 112 RKARIGGRTVRYLRLGEGDGTPVVLIHGFGGDLNNWLFNHAALAA-GRPVIALDLPGHGASSKAV--GAGSLDELAAAVL 188 (371)
T ss_pred CcceEcCcEEEEecccCCCCCeEEEECCCCCccchHHHHHHHHhc-CCEEEEEcCCCCCCCCCCC--CCCCHHHHHHHHH
Confidence 45667888999998885 578999999999999999999888865 6999999999999996532 3578999999999
Q ss_pred HHHHHhCCceEEEEEcCccHHHHHHHHHhcccccceeEEecCCCCCCCcchhhhccCcchhhhhcCCcchhhhhccCCcH
Q 021424 86 AILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRLDA 165 (312)
Q Consensus 86 ~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (312)
++++.++.++++++||||||.+++.+|..+|+++.++|+++++...... ... +...+...... ...
T Consensus 189 ~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~-------~~~-~~~~~~~~~~~------~~~ 254 (371)
T PRK14875 189 AFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEI-------NGD-YIDGFVAAESR------REL 254 (371)
T ss_pred HHHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCccc-------chh-HHHHhhcccch------hHH
Confidence 9999999999999999999999999999999999999998754321100 000 00000000000 000
Q ss_pred HHHHHHHHHhhcCCCCCCCcchhhhhhhcCCCCCCCCCCCHHHHHHHHHhhccCCCCccccccccccccccCCCCccccc
Q 021424 166 KTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLRENFSTPEVIAVK 245 (312)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 245 (312)
...+.. .+.... .. . ............. . .....+....... +....+. + .. .....+++
T Consensus 255 ~~~~~~---~~~~~~-~~--~-~~~~~~~~~~~~~-~-~~~~~~~~~~~~~----~~~~~~~-~----~~--~~~l~~i~ 314 (371)
T PRK14875 255 KPVLEL---LFADPA-LV--T-RQMVEDLLKYKRL-D-GVDDALRALADAL----FAGGRQR-V----DL--RDRLASLA 314 (371)
T ss_pred HHHHHH---HhcChh-hC--C-HHHHHHHHHHhcc-c-cHHHHHHHHHHHh----ccCcccc-h----hH--HHHHhcCC
Confidence 001110 000000 00 0 0000000000000 0 0000111110000 0000000 0 00 00011589
Q ss_pred ccEEEEeeCCCCCCCCCCchhhhhccchhccCCCceEEEeCCCCCCCCCcChHHHHHHHHHHhhhc
Q 021424 246 VPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLNKH 311 (312)
Q Consensus 246 ~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~~~ 311 (312)
+|+++++|++|.+++.... +...+++++.+++++||++++|+|++|++.|.+||+++
T Consensus 315 ~Pvlii~g~~D~~vp~~~~---------~~l~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 371 (371)
T PRK14875 315 IPVLVIWGEQDRIIPAAHA---------QGLPDGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGKA 371 (371)
T ss_pred CCEEEEEECCCCccCHHHH---------hhccCCCeEEEeCCCCCChhhhCHHHHHHHHHHHhccC
Confidence 9999999999998864321 22345789999999999999999999999999999763
No 34
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=6.6e-29 Score=218.40 Aligned_cols=120 Identities=18% Similarity=0.322 Sum_probs=98.1
Q ss_pred eeeeCCeEEEEEecCC-----CCceEEEECCCCCch-hhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHH
Q 021424 8 FIKVQGLNLHIAEAGA-----DAHVVVFLHGFPEIW-YSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMV 81 (312)
Q Consensus 8 ~~~~~g~~i~~~~~g~-----~~~~vlllHG~~~~~-~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a 81 (312)
+...||.+++|..+++ .+++|||+||++++. ..|......|...||+|+++|+||||.|+... ....+++.++
T Consensus 37 ~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~-~~~~~~~~~~ 115 (330)
T PLN02298 37 FTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLR-AYVPNVDLVV 115 (330)
T ss_pred EEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCcc-ccCCCHHHHH
Confidence 3444999999987653 234599999998654 34556667788789999999999999997532 2245899999
Q ss_pred HHHHHHHHHhCC------ceEEEEEcCccHHHHHHHHHhcccccceeEEecCC
Q 021424 82 DDLLAILDHLGL------AKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 128 (312)
Q Consensus 82 ~di~~~~~~l~~------~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 128 (312)
+|+.++++.++. .+++|+||||||.+++.++..+|++|+++|++++.
T Consensus 116 ~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~ 168 (330)
T PLN02298 116 EDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPM 168 (330)
T ss_pred HHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEeccc
Confidence 999999999864 36999999999999999999999999999999764
No 35
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=5.5e-29 Score=223.24 Aligned_cols=113 Identities=25% Similarity=0.320 Sum_probs=93.2
Q ss_pred EEEEEecC-C-CCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCC----HHHHHHHHHHHH
Q 021424 15 NLHIAEAG-A-DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTS----FQDMVDDLLAIL 88 (312)
Q Consensus 15 ~i~~~~~g-~-~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~----~~~~a~di~~~~ 88 (312)
++++.... . ++|+|||+||++++...|...+..|.. +|+|+++|+||||.|+++... ..+ ...+++++.+++
T Consensus 93 ~~~~~~~~~~~~~p~vvllHG~~~~~~~~~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~-~~~~~~~~~~~~~~i~~~~ 170 (402)
T PLN02894 93 FINTVTFDSKEDAPTLVMVHGYGASQGFFFRNFDALAS-RFRVIAIDQLGWGGSSRPDFT-CKSTEETEAWFIDSFEEWR 170 (402)
T ss_pred eEEEEEecCCCCCCEEEEECCCCcchhHHHHHHHHHHh-CCEEEEECCCCCCCCCCCCcc-cccHHHHHHHHHHHHHHHH
Confidence 55554432 2 578999999999999999888888875 699999999999999865321 111 224678889999
Q ss_pred HHhCCceEEEEEcCccHHHHHHHHHhcccccceeEEecCCC
Q 021424 89 DHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPI 129 (312)
Q Consensus 89 ~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~ 129 (312)
+.+++++++|+||||||.+++.+|.++|++|+++|+++++.
T Consensus 171 ~~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~ 211 (402)
T PLN02894 171 KAKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAG 211 (402)
T ss_pred HHcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCcc
Confidence 99999999999999999999999999999999999997653
No 36
>PRK05855 short chain dehydrogenase; Validated
Probab=99.97 E-value=3.7e-29 Score=236.22 Aligned_cols=122 Identities=25% Similarity=0.478 Sum_probs=104.4
Q ss_pred cccceeeeCCeEEEEEecCC-CCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHH
Q 021424 4 IEHKFIKVQGLNLHIAEAGA-DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVD 82 (312)
Q Consensus 4 ~~~~~~~~~g~~i~~~~~g~-~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~ 82 (312)
.+..++..+|.+|+|...|+ ++|+|||+|||++++..|..+++.| .++|+|+++|+||||.|+.+.....|++.++++
T Consensus 3 ~~~~~~~~~g~~l~~~~~g~~~~~~ivllHG~~~~~~~w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~ 81 (582)
T PRK05855 3 PRRTVVSSDGVRLAVYEWGDPDRPTVVLVHGYPDNHEVWDGVAPLL-ADRFRVVAYDVRGAGRSSAPKRTAAYTLARLAD 81 (582)
T ss_pred ceEEEEeeCCEEEEEEEcCCCCCCeEEEEcCCCchHHHHHHHHHHh-hcceEEEEecCCCCCCCCCCCcccccCHHHHHH
Confidence 34566778999999999996 5789999999999999999999888 568999999999999998765545789999999
Q ss_pred HHHHHHHHhCCce-EEEEEcCccHHHHHHHHHh--cccccceeEEec
Q 021424 83 DLLAILDHLGLAK-VFLVAKDFGALTAYMFAIQ--HQERVSGVITLG 126 (312)
Q Consensus 83 di~~~~~~l~~~~-~~lvGhS~Gg~va~~~a~~--~p~~v~~lv~~~ 126 (312)
|+.+++++++.++ ++|+||||||.+++.++.. .|+++.+++.++
T Consensus 82 dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~ 128 (582)
T PRK05855 82 DFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVS 128 (582)
T ss_pred HHHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheecc
Confidence 9999999999877 9999999999999988876 345565555544
No 37
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.97 E-value=1.8e-30 Score=214.71 Aligned_cols=101 Identities=41% Similarity=0.644 Sum_probs=92.5
Q ss_pred EEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEcCccHHH
Q 021424 28 VVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALT 107 (312)
Q Consensus 28 vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~~~~lvGhS~Gg~v 107 (312)
|||+||++++...|..+++.|. ++|+|+++|+||||.|+.+.....+++.++++|+.+++++++.++++++|||+||.+
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~ 79 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMI 79 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccccccccccccccccccc
Confidence 7999999999999999999884 699999999999999987654346899999999999999999999999999999999
Q ss_pred HHHHHHhcccccceeEEecCCC
Q 021424 108 AYMFAIQHQERVSGVITLGVPI 129 (312)
Q Consensus 108 a~~~a~~~p~~v~~lv~~~~~~ 129 (312)
++.+|.++|++|+++|+++++.
T Consensus 80 a~~~a~~~p~~v~~~vl~~~~~ 101 (228)
T PF12697_consen 80 ALRLAARYPDRVKGLVLLSPPP 101 (228)
T ss_dssp HHHHHHHSGGGEEEEEEESESS
T ss_pred ccccccccccccccceeecccc
Confidence 9999999999999999998654
No 38
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.96 E-value=2.4e-28 Score=212.54 Aligned_cols=125 Identities=26% Similarity=0.379 Sum_probs=105.2
Q ss_pred cccceeee-CCeEEEEEecCC-CCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHH
Q 021424 4 IEHKFIKV-QGLNLHIAEAGA-DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMV 81 (312)
Q Consensus 4 ~~~~~~~~-~g~~i~~~~~g~-~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a 81 (312)
....++.+ +|.+++|.+.|+ ++++|||+||++++...+. ....+...+|+||++|+||||.|+.+.....+++.+++
T Consensus 4 ~~~~~~~~~~~~~l~y~~~g~~~~~~lvllHG~~~~~~~~~-~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 82 (306)
T TIGR01249 4 FVSGYLNVSDNHQLYYEQSGNPDGKPVVFLHGGPGSGTDPG-CRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLV 82 (306)
T ss_pred ccCCeEEcCCCcEEEEEECcCCCCCEEEEECCCCCCCCCHH-HHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHH
Confidence 45567776 688999999985 5789999999988766543 44445456899999999999999865433457889999
Q ss_pred HHHHHHHHHhCCceEEEEEcCccHHHHHHHHHhcccccceeEEecCCC
Q 021424 82 DDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPI 129 (312)
Q Consensus 82 ~di~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~ 129 (312)
+|+..+++++++++++++||||||.+++.+|.++|++|+++|++++..
T Consensus 83 ~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 83 ADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred HHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeecccc
Confidence 999999999999999999999999999999999999999999998654
No 39
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.96 E-value=5.3e-29 Score=191.65 Aligned_cols=243 Identities=23% Similarity=0.359 Sum_probs=163.6
Q ss_pred cceeeeCCeEEEEEecCCCCceEEEECCC-CCchhhHHHHHHHHhhC-CcEEEeeCCCCCCCCCCCCCCC-CCCHHHHHH
Q 021424 6 HKFIKVQGLNLHIAEAGADAHVVVFLHGF-PEIWYSWRHQMVGVATA-GFRAIAPDCRGYGLSDPPAEPE-KTSFQDMVD 82 (312)
Q Consensus 6 ~~~~~~~g~~i~~~~~g~~~~~vlllHG~-~~~~~~~~~~~~~l~~~-~~~vi~~Dl~G~G~S~~~~~~~-~~~~~~~a~ 82 (312)
+..+.+||..++|..+|.+...||++.|. ++...+|.+++..|... .+++|++|.||||.|.+|...- ..-+..-++
T Consensus 23 e~kv~vng~ql~y~~~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~ 102 (277)
T KOG2984|consen 23 ESKVHVNGTQLGYCKYGHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAE 102 (277)
T ss_pred hheeeecCceeeeeecCCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHH
Confidence 46777899999999999544489999997 45666899988877654 4899999999999998764321 112344577
Q ss_pred HHHHHHHHhCCceEEEEEcCccHHHHHHHHHhcccccceeEEecCC-CCCC-CcchhhhccCcchh-hhhcCCcchhhhh
Q 021424 83 DLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP-ILPP-GPIEFHKYLPEGFY-ISRWQEPGRAEAD 159 (312)
Q Consensus 83 di~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~-~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 159 (312)
+...++++|..++|.++|||=||..++.+|+++++.|.++|+.++. +... +.+.+ ++.+ .+.|....+.
T Consensus 103 ~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~-----kgiRdv~kWs~r~R~--- 174 (277)
T KOG2984|consen 103 YAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAF-----KGIRDVNKWSARGRQ--- 174 (277)
T ss_pred HHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHH-----hchHHHhhhhhhhcc---
Confidence 7888999999999999999999999999999999999999988653 2221 11111 1110 1112110000
Q ss_pred ccCCcHHHHHHHHHHhhcCCCCCCCcchhhhhhhcCCCCCCCCCCCHH----HHHHHHHhhcc-CCCCcccccccccccc
Q 021424 160 FGRLDAKTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEE----DLAAYGALYEK-SGFRTALQVPYRTLRE 234 (312)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 234 (312)
-... .+..+ .++++.....+ ..+... .
T Consensus 175 --------P~e~-------------------------------~Yg~e~f~~~wa~wvD~v~qf~~~~dG---------~ 206 (277)
T KOG2984|consen 175 --------PYED-------------------------------HYGPETFRTQWAAWVDVVDQFHSFCDG---------R 206 (277)
T ss_pred --------hHHH-------------------------------hcCHHHHHHHHHHHHHHHHHHhhcCCC---------c
Confidence 0000 00001 11111111100 000000 0
Q ss_pred ccCCCCcccccccEEEEeeCCCCCCCCCCchhhhhccchhccCCCceEEEeCCCCCCCCCcChHHHHHHHHHHhhhc
Q 021424 235 NFSTPEVIAVKVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLNKH 311 (312)
Q Consensus 235 ~~~~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~~~ 311 (312)
.+....+ +++||+||++|+.|++++.+.+ -.+....+.+++.+.|+++|..|+.-|++||.++.+||+++
T Consensus 207 fCr~~lp-~vkcPtli~hG~kDp~~~~~hv------~fi~~~~~~a~~~~~peGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 207 FCRLVLP-QVKCPTLIMHGGKDPFCGDPHV------CFIPVLKSLAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred hHhhhcc-cccCCeeEeeCCcCCCCCCCCc------cchhhhcccceEEEccCCCcceeeechHHHHHHHHHHHhcc
Confidence 0112223 7999999999999999875443 23455678899999999999999999999999999999864
No 40
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.96 E-value=5.6e-28 Score=246.94 Aligned_cols=122 Identities=26% Similarity=0.428 Sum_probs=102.9
Q ss_pred cceeee--CCeE--EEEEecCC--CCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCC------CC
Q 021424 6 HKFIKV--QGLN--LHIAEAGA--DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAE------PE 73 (312)
Q Consensus 6 ~~~~~~--~g~~--i~~~~~g~--~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~------~~ 73 (312)
..++.+ +|.+ ++|...|. ++|+|||+|||+++...|..++..|.+ +|+|+++|+||||.|+.+.. ..
T Consensus 1346 ~~~~~v~~~~~~~~i~~~~~G~~~~~~~vVllHG~~~s~~~w~~~~~~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~ 1424 (1655)
T PLN02980 1346 TYELRVDVDGFSCLIKVHEVGQNAEGSVVLFLHGFLGTGEDWIPIMKAISG-SARCISIDLPGHGGSKIQNHAKETQTEP 1424 (1655)
T ss_pred eEEEEEccCceEEEEEEEecCCCCCCCeEEEECCCCCCHHHHHHHHHHHhC-CCEEEEEcCCCCCCCCCccccccccccc
Confidence 344444 3433 55666674 468999999999999999999988865 69999999999999976421 23
Q ss_pred CCCHHHHHHHHHHHHHHhCCceEEEEEcCccHHHHHHHHHhcccccceeEEecCC
Q 021424 74 KTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 128 (312)
Q Consensus 74 ~~~~~~~a~di~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 128 (312)
.++++.+++++.+++++++.++++++||||||.+++.+|.++|++|+++|++++.
T Consensus 1425 ~~si~~~a~~l~~ll~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~ 1479 (1655)
T PLN02980 1425 TLSVELVADLLYKLIEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGS 1479 (1655)
T ss_pred cCCHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCC
Confidence 5789999999999999999999999999999999999999999999999998653
No 41
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.96 E-value=4.5e-27 Score=209.39 Aligned_cols=115 Identities=20% Similarity=0.237 Sum_probs=96.0
Q ss_pred CCeEEEEEecCC----CCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 021424 12 QGLNLHIAEAGA----DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAI 87 (312)
Q Consensus 12 ~g~~i~~~~~g~----~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~ 87 (312)
+|..++|..+.+ ..++|||+||++++...|..+++.|.+.||+|+++|+||||.|+... ...+++..+++|+.++
T Consensus 119 ~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~-~~~~~~~~~~~Dl~~~ 197 (395)
T PLN02652 119 RRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLH-GYVPSLDYVVEDTEAF 197 (395)
T ss_pred CCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC-CCCcCHHHHHHHHHHH
Confidence 667888877654 23589999999999999999999998889999999999999998642 2345888999999999
Q ss_pred HHHhCC----ceEEEEEcCccHHHHHHHHHhccc---ccceeEEecCC
Q 021424 88 LDHLGL----AKVFLVAKDFGALTAYMFAIQHQE---RVSGVITLGVP 128 (312)
Q Consensus 88 ~~~l~~----~~~~lvGhS~Gg~va~~~a~~~p~---~v~~lv~~~~~ 128 (312)
++.+.. .+++++||||||.+++.+| .+|+ +++++|+.++.
T Consensus 198 l~~l~~~~~~~~i~lvGhSmGG~ial~~a-~~p~~~~~v~glVL~sP~ 244 (395)
T PLN02652 198 LEKIRSENPGVPCFLFGHSTGGAVVLKAA-SYPSIEDKLEGIVLTSPA 244 (395)
T ss_pred HHHHHHhCCCCCEEEEEECHHHHHHHHHH-hccCcccccceEEEECcc
Confidence 999863 3799999999999999776 4664 89999998654
No 42
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.95 E-value=2.7e-26 Score=197.05 Aligned_cols=127 Identities=28% Similarity=0.389 Sum_probs=108.9
Q ss_pred cccceeeeCCeEEEEEecCC-CC--ceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHH
Q 021424 4 IEHKFIKVQGLNLHIAEAGA-DA--HVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDM 80 (312)
Q Consensus 4 ~~~~~~~~~g~~i~~~~~g~-~~--~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~ 80 (312)
.+..+...+|.+++|...-. +. -+||++||+..++..|..++..|...||.|+++|+||||.|.....+..-+++++
T Consensus 10 ~~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~ 89 (298)
T COG2267 10 TEGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADY 89 (298)
T ss_pred ccceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHH
Confidence 34567777999999987764 22 4799999999999999999999999999999999999999973223334469999
Q ss_pred HHHHHHHHHHhC----CceEEEEEcCccHHHHHHHHHhcccccceeEEecCCCC
Q 021424 81 VDDLLAILDHLG----LAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPIL 130 (312)
Q Consensus 81 a~di~~~~~~l~----~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~ 130 (312)
.+|+.++++... -.+++++||||||.|++.++.+++.+++++|++++...
T Consensus 90 ~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~ 143 (298)
T COG2267 90 VDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALG 143 (298)
T ss_pred HHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECcccc
Confidence 999999999985 36899999999999999999999999999999876543
No 43
>PLN02511 hydrolase
Probab=99.94 E-value=1.8e-26 Score=206.13 Aligned_cols=250 Identities=21% Similarity=0.312 Sum_probs=143.4
Q ss_pred CCceEEEECCCCCchhh-H-HHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC----ceEE
Q 021424 24 DAHVVVFLHGFPEIWYS-W-RHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGL----AKVF 97 (312)
Q Consensus 24 ~~~~vlllHG~~~~~~~-~-~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~----~~~~ 97 (312)
++|+||++||+.+++.. | ..++..+.++||+|+++|+||||.|+... +..| ...+++|+.+++++++. .+++
T Consensus 99 ~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~-~~~~-~~~~~~Dl~~~i~~l~~~~~~~~~~ 176 (388)
T PLN02511 99 DAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTT-PQFY-SASFTGDLRQVVDHVAGRYPSANLY 176 (388)
T ss_pred CCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCC-cCEE-cCCchHHHHHHHHHHHHHCCCCCEE
Confidence 57899999999876654 5 45666677789999999999999997542 2222 35678899999999876 5899
Q ss_pred EEEcCccHHHHHHHHHhcccc--cceeEEecCCCCCCCcchhhhccCcchhhhhcCCcchhhhhccCCcHHHHHHHHHHh
Q 021424 98 LVAKDFGALTAYMFAIQHQER--VSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRLDAKTVVRNIYIL 175 (312)
Q Consensus 98 lvGhS~Gg~va~~~a~~~p~~--v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (312)
+|||||||.+++.|+..+|++ |.++++++++.... .....+..+. ...... .+.. ..+.........
T Consensus 177 lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~---~~~~~~~~~~--~~~y~~-----~~~~-~l~~~~~~~~~~ 245 (388)
T PLN02511 177 AAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLV---IADEDFHKGF--NNVYDK-----ALAK-ALRKIFAKHALL 245 (388)
T ss_pred EEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHH---HHHHHHhccH--HHHHHH-----HHHH-HHHHHHHHHHHH
Confidence 999999999999999999988 88888776543210 0000000000 000000 0000 000000000000
Q ss_pred hcCCCCCCCcchhhhhhhcCCCCCCCCCCCHHHHHHHHHhhcc--CCCCccccccccccccccCCCCcccccccEEEEee
Q 021424 176 FSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEK--SGFRTALQVPYRTLRENFSTPEVIAVKVPALLIMG 253 (312)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G 253 (312)
+... +...+..... .. .+ +..+...+.. .++.....+ |+... ......+|++|+|+|+|
T Consensus 246 ~~~~--~~~~~~~~~~----~~------~~---~~~fd~~~t~~~~gf~~~~~y-y~~~s---~~~~L~~I~vPtLiI~g 306 (388)
T PLN02511 246 FEGL--GGEYNIPLVA----NA------KT---VRDFDDGLTRVSFGFKSVDAY-YSNSS---SSDSIKHVRVPLLCIQA 306 (388)
T ss_pred HhhC--CCccCHHHHH----hC------CC---HHHHHHhhhhhcCCCCCHHHH-HHHcC---chhhhccCCCCeEEEEc
Confidence 0000 0000000000 00 00 1111111110 011111000 11100 01112269999999999
Q ss_pred CCCCCCCCCCchhhhhccchhccCCCceEEEeCCCCCCCCCcChHH------HHHHHHHHhhh
Q 021424 254 DKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEE------VNQLILTFLNK 310 (312)
Q Consensus 254 ~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~GH~~~~e~p~~------~~~~i~~fl~~ 310 (312)
++|++++..... ..+.+..|++++++++++||++++|+|+. +++.+.+||+.
T Consensus 307 ~dDpi~p~~~~~-----~~~~~~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~ 364 (388)
T PLN02511 307 ANDPIAPARGIP-----REDIKANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEA 364 (388)
T ss_pred CCCCcCCcccCc-----HhHHhcCCCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHH
Confidence 999998754332 12344679999999999999999999986 58999999964
No 44
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.93 E-value=1.1e-24 Score=193.48 Aligned_cols=117 Identities=16% Similarity=0.265 Sum_probs=94.2
Q ss_pred CCeEEEEEecCC----CCceEEEECCCCCchhh-------------HHHHHH---HHhhCCcEEEeeCCCCCCCCCCC--
Q 021424 12 QGLNLHIAEAGA----DAHVVVFLHGFPEIWYS-------------WRHQMV---GVATAGFRAIAPDCRGYGLSDPP-- 69 (312)
Q Consensus 12 ~g~~i~~~~~g~----~~~~vlllHG~~~~~~~-------------~~~~~~---~l~~~~~~vi~~Dl~G~G~S~~~-- 69 (312)
+..+++|+++|. ..++||+.|++.+++.. |+.++- .|-...|.|||+|..|-|.|..|
T Consensus 39 ~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~ 118 (389)
T PRK06765 39 PDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNV 118 (389)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCC
Confidence 677899999995 24799999999886532 655442 23345699999999998764321
Q ss_pred ---------C--------CCCCCCHHHHHHHHHHHHHHhCCceEE-EEEcCccHHHHHHHHHhcccccceeEEecCC
Q 021424 70 ---------A--------EPEKTSFQDMVDDLLAILDHLGLAKVF-LVAKDFGALTAYMFAIQHQERVSGVITLGVP 128 (312)
Q Consensus 70 ---------~--------~~~~~~~~~~a~di~~~~~~l~~~~~~-lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 128 (312)
+ +...+++.++++++.+++++|++++++ +|||||||.+++.+|.++|++|+++|++++.
T Consensus 119 g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~ 195 (389)
T PRK06765 119 ITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGN 195 (389)
T ss_pred CCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecC
Confidence 1 112489999999999999999999997 9999999999999999999999999998754
No 45
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.93 E-value=1.5e-24 Score=181.25 Aligned_cols=250 Identities=20% Similarity=0.280 Sum_probs=153.8
Q ss_pred CCceEEEECCCCCchhhHHHHHHHHhhC-CcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC----CceEEE
Q 021424 24 DAHVVVFLHGFPEIWYSWRHQMVGVATA-GFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLG----LAKVFL 98 (312)
Q Consensus 24 ~~~~vlllHG~~~~~~~~~~~~~~l~~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~----~~~~~l 98 (312)
..||++++||+.++...|..+...|+.+ +..|+++|+|.||.|.+.. .++...+++|+..||+..+ ..++.+
T Consensus 51 ~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~---~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l 127 (315)
T KOG2382|consen 51 RAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKIT---VHNYEAMAEDVKLFIDGVGGSTRLDPVVL 127 (315)
T ss_pred CCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCcccc---ccCHHHHHHHHHHHHHHcccccccCCcee
Confidence 5799999999999999999988888753 5689999999999997653 4578899999999999985 678999
Q ss_pred EEcCccH-HHHHHHHHhcccccceeEEecCCCC--CCCcchhhhccCcchhhhhcCCcchhhhhccCCcHHHHHHHHHHh
Q 021424 99 VAKDFGA-LTAYMFAIQHQERVSGVITLGVPIL--PPGPIEFHKYLPEGFYISRWQEPGRAEADFGRLDAKTVVRNIYIL 175 (312)
Q Consensus 99 vGhS~Gg-~va~~~a~~~p~~v~~lv~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (312)
+|||||| .+++.++..+|+++..+|+++.++- +......... +..+......... ....++....+...
T Consensus 128 ~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~------i~~m~~~d~~~~~--~~~rke~~~~l~~~ 199 (315)
T KOG2382|consen 128 LGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYREL------IKAMIQLDLSIGV--SRGRKEALKSLIEV 199 (315)
T ss_pred cccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHH------HHHHHhccccccc--cccHHHHHHHHHHH
Confidence 9999999 7777888889999999999986432 1111111100 0000000000000 00001111110000
Q ss_pred hcCCCCCCCcchhhh-hhhcC--CCCCCCCC-CCHHHHHHHHHhhccCCCCccccccccccccccCCCCcccccccEEEE
Q 021424 176 FSRSEIPIAPENKEI-MDLVS--DSTPLPPW-FTEEDLAAYGALYEKSGFRTALQVPYRTLRENFSTPEVIAVKVPALLI 251 (312)
Q Consensus 176 ~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i 251 (312)
. ......++ ..... .......| ..-+.+......+. +..|... ..+. ....||+++
T Consensus 200 -~-----~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~--------~~s~~~~-----l~~~-~~~~pvlfi 259 (315)
T KOG2382|consen 200 -G-----FDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYE--------ILSYWAD-----LEDG-PYTGPVLFI 259 (315)
T ss_pred -h-----cchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHH--------hhccccc-----cccc-ccccceeEE
Confidence 0 00000000 00011 00000111 11111111111100 0001110 1111 568899999
Q ss_pred eeCCCCCCCCCCchhhhhccchhccCCCceEEEeCCCCCCCCCcChHHHHHHHHHHhhh
Q 021424 252 MGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLNK 310 (312)
Q Consensus 252 ~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~~ 310 (312)
.|.++..++.+.. .++.+.+|+++++.+++||||+|+|+|++|.+.|.+|+.+
T Consensus 260 ~g~~S~fv~~~~~------~~~~~~fp~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~ 312 (315)
T KOG2382|consen 260 KGLQSKFVPDEHY------PRMEKIFPNVEVHELDEAGHWVHLEKPEEFIESISEFLEE 312 (315)
T ss_pred ecCCCCCcChhHH------HHHHHhccchheeecccCCceeecCCHHHHHHHHHHHhcc
Confidence 9999999875321 3567789999999999999999999999999999999875
No 46
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.93 E-value=3e-24 Score=188.19 Aligned_cols=121 Identities=18% Similarity=0.298 Sum_probs=94.3
Q ss_pred eeeeCCeEEEEEecCCC--CceEEEECCCCCchh-hH-------------------------HHHHHHHhhCCcEEEeeC
Q 021424 8 FIKVQGLNLHIAEAGAD--AHVVVFLHGFPEIWY-SW-------------------------RHQMVGVATAGFRAIAPD 59 (312)
Q Consensus 8 ~~~~~g~~i~~~~~g~~--~~~vlllHG~~~~~~-~~-------------------------~~~~~~l~~~~~~vi~~D 59 (312)
+.+.+|.+|++..+-++ +-+|+++||+++++. .| ..+++.|.+.||+|+++|
T Consensus 2 ~~~~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D 81 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLD 81 (332)
T ss_pred ccCCCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEec
Confidence 34458999998876542 238999999999886 21 346788988999999999
Q ss_pred CCCCCCCCCCCCCC--CCCHHHHHHHHHHHHHHhC------------------------CceEEEEEcCccHHHHHHHHH
Q 021424 60 CRGYGLSDPPAEPE--KTSFQDMVDDLLAILDHLG------------------------LAKVFLVAKDFGALTAYMFAI 113 (312)
Q Consensus 60 l~G~G~S~~~~~~~--~~~~~~~a~di~~~~~~l~------------------------~~~~~lvGhS~Gg~va~~~a~ 113 (312)
+||||.|+...... ..++.++++|+.++++... -.+++|+||||||.+++.++.
T Consensus 82 ~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~ 161 (332)
T TIGR01607 82 LQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLE 161 (332)
T ss_pred ccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHH
Confidence 99999998542212 2489999999999998752 236899999999999999998
Q ss_pred hccc--------ccceeEEecCC
Q 021424 114 QHQE--------RVSGVITLGVP 128 (312)
Q Consensus 114 ~~p~--------~v~~lv~~~~~ 128 (312)
.+++ .++++|+++++
T Consensus 162 ~~~~~~~~~~~~~i~g~i~~s~~ 184 (332)
T TIGR01607 162 LLGKSNENNDKLNIKGCISLSGM 184 (332)
T ss_pred HhccccccccccccceEEEeccc
Confidence 7653 58888877654
No 47
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.93 E-value=1.3e-24 Score=170.42 Aligned_cols=225 Identities=19% Similarity=0.232 Sum_probs=143.0
Q ss_pred CceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCceEEEEEc
Q 021424 25 AHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL---GLAKVFLVAK 101 (312)
Q Consensus 25 ~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l---~~~~~~lvGh 101 (312)
+..|||||||.++..+.+.+...|.+.||+|.+|-+||||.... +--.++..+|-+|+.+..++| +-+.+.++|-
T Consensus 15 ~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e--~fl~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~Gl 92 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPE--DFLKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGL 92 (243)
T ss_pred CEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHH--HHhcCCHHHHHHHHHHHHHHHHHcCCCeEEEEee
Confidence 37999999999999999999999999999999999999998742 223567888877777766665 6789999999
Q ss_pred CccHHHHHHHHHhcccccceeEEecCCCCCCCcchhhhccCcchhhhhcCCcchhhhhccCCcHHHHHHHHHHhhcCCCC
Q 021424 102 DFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRLDAKTVVRNIYILFSRSEI 181 (312)
Q Consensus 102 S~Gg~va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (312)
||||.+++.+|..+| ++++|.++++........+ -+++. .+ .++ +..+..
T Consensus 93 SmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~i----ie~~l--~y------------------~~~-~kk~e~--- 142 (243)
T COG1647 93 SMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRII----IEGLL--EY------------------FRN-AKKYEG--- 142 (243)
T ss_pred cchhHHHHHHHhhCC--ccceeeecCCcccccchhh----hHHHH--HH------------------HHH-hhhccC---
Confidence 999999999999999 9999988776543211000 01100 00 000 000000
Q ss_pred CCCcchhhhhhhcCCCCCCCCCCCHHHHHHHHHhhccCCCCccccccccccccccCCCCcccccccEEEEeeCCCCCCCC
Q 021424 182 PIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLRENFSTPEVIAVKVPALLIMGDKDYFLKF 261 (312)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~D~~~~~ 261 (312)
...+.....+...... ++- ....+...+. . ... ....|..|++++.|++|+.++.
T Consensus 143 k~~e~~~~e~~~~~~~----~~~---~~~~~~~~i~-------------~----~~~-~~~~I~~pt~vvq~~~D~mv~~ 197 (243)
T COG1647 143 KDQEQIDKEMKSYKDT----PMT---TTAQLKKLIK-------------D----ARR-SLDKIYSPTLVVQGRQDEMVPA 197 (243)
T ss_pred CCHHHHHHHHHHhhcc----hHH---HHHHHHHHHH-------------H----HHh-hhhhcccchhheecccCCCCCH
Confidence 0000000000000000 000 0111111100 0 000 1116899999999999999986
Q ss_pred CCchhhhhccchhccCCCceEEEeCCCCCCCCC-cChHHHHHHHHHHhhh
Q 021424 262 PGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQE-QSPEEVNQLILTFLNK 310 (312)
Q Consensus 262 ~~~~~~~~~~~~~~~~p~~~~~~~~~~GH~~~~-e~p~~~~~~i~~fl~~ 310 (312)
+...-+.. +.....-++.+++++||.... ++.|.+.+.|..||+.
T Consensus 198 ~sA~~Iy~----~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 198 ESANFIYD----HVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred HHHHHHHH----hccCCcceeEEEccCCceeecchhHHHHHHHHHHHhhC
Confidence 54433322 122334689999999999977 4579999999999973
No 48
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.91 E-value=6.9e-23 Score=175.16 Aligned_cols=115 Identities=23% Similarity=0.289 Sum_probs=89.1
Q ss_pred eeeCCeEEEE-Eec-C-CCCceEEEECCCCC----chhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHH
Q 021424 9 IKVQGLNLHI-AEA-G-ADAHVVVFLHGFPE----IWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMV 81 (312)
Q Consensus 9 ~~~~g~~i~~-~~~-g-~~~~~vlllHG~~~----~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a 81 (312)
+..+|.++.- ... + .++++||++||+++ +...|..+++.|.+.||+|+++|+||||.|+.. .+++.++.
T Consensus 7 ~~~~~~~l~g~~~~p~~~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~----~~~~~~~~ 82 (274)
T TIGR03100 7 FSCEGETLVGVLHIPGASHTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGE----NLGFEGID 82 (274)
T ss_pred EEcCCcEEEEEEEcCCCCCCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCC----CCCHHHHH
Confidence 3446666542 222 1 24678999998763 444566778889888999999999999999632 24778889
Q ss_pred HHHHHHHHHh-----CCceEEEEEcCccHHHHHHHHHhcccccceeEEecCC
Q 021424 82 DDLLAILDHL-----GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 128 (312)
Q Consensus 82 ~di~~~~~~l-----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 128 (312)
+|+.++++.+ +.++++++||||||.+++.+|.. +++|+++|++++.
T Consensus 83 ~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~ 133 (274)
T TIGR03100 83 ADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPW 133 (274)
T ss_pred HHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCc
Confidence 9999998887 67889999999999999999865 5689999999765
No 49
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.90 E-value=3.3e-22 Score=164.67 Aligned_cols=121 Identities=24% Similarity=0.343 Sum_probs=100.3
Q ss_pred ceeeeCCeEEEEEecCC-C--Cc--eEEEECCCCCch-hhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHH
Q 021424 7 KFIKVQGLNLHIAEAGA-D--AH--VVVFLHGFPEIW-YSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDM 80 (312)
Q Consensus 7 ~~~~~~g~~i~~~~~g~-~--~~--~vlllHG~~~~~-~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~ 80 (312)
.+.+.+|.++.+..+-+ + .| .|+++||++..+ ..|...+..|+..||.|+++|++|||.|+... ..--++...
T Consensus 31 ~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~-~yi~~~d~~ 109 (313)
T KOG1455|consen 31 FFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLH-AYVPSFDLV 109 (313)
T ss_pred eEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCc-ccCCcHHHH
Confidence 34455899999987765 2 33 599999998865 67788889999999999999999999999643 234589999
Q ss_pred HHHHHHHHHHhC------CceEEEEEcCccHHHHHHHHHhcccccceeEEecCC
Q 021424 81 VDDLLAILDHLG------LAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 128 (312)
Q Consensus 81 a~di~~~~~~l~------~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 128 (312)
++|+..+.+... .-+..|.||||||.|++.++.++|+..+++|++++.
T Consensus 110 v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPm 163 (313)
T KOG1455|consen 110 VDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPM 163 (313)
T ss_pred HHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecc
Confidence 999999998632 236889999999999999999999999999998754
No 50
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.90 E-value=1.4e-21 Score=175.50 Aligned_cols=215 Identities=17% Similarity=0.113 Sum_probs=133.7
Q ss_pred CceEEEECCCCCch-hhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCceEEEEE
Q 021424 25 AHVVVFLHGFPEIW-YSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL---GLAKVFLVA 100 (312)
Q Consensus 25 ~~~vlllHG~~~~~-~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l---~~~~~~lvG 100 (312)
.|+||+.||+.+.. ..|...+..|.+.||+|+++|+||||.|.... ...+.....+++.+++... +.+++.++|
T Consensus 194 ~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~--~~~d~~~~~~avld~l~~~~~vd~~ri~l~G 271 (414)
T PRK05077 194 FPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWK--LTQDSSLLHQAVLNALPNVPWVDHTRVAAFG 271 (414)
T ss_pred ccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCC--ccccHHHHHHHHHHHHHhCcccCcccEEEEE
Confidence 34555555555443 46877788898889999999999999996532 1234555566777777665 567899999
Q ss_pred cCccHHHHHHHHHhcccccceeEEecCCCCCCCcchhhhccCcchhhhhcCCcchhhhhccCCcHHHHHHHHHHhhcCCC
Q 021424 101 KDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRLDAKTVVRNIYILFSRSE 180 (312)
Q Consensus 101 hS~Gg~va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (312)
|||||.+++.+|+.+|++++++|+++++.... .. .. ..+. .. .......+. ....
T Consensus 272 ~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~--~~-----~~----~~~~----------~~--p~~~~~~la--~~lg 326 (414)
T PRK05077 272 FRFGANVAVRLAYLEPPRLKAVACLGPVVHTL--LT-----DP----KRQQ----------QV--PEMYLDVLA--SRLG 326 (414)
T ss_pred EChHHHHHHHHHHhCCcCceEEEEECCccchh--hc-----ch----hhhh----------hc--hHHHHHHHH--HHhC
Confidence 99999999999999999999999987653210 00 00 0000 00 000000000 0000
Q ss_pred CCCCcchhhhhhhcCCCCCCCCCCCHHHHHHHHHhhccCCCCccccccccccccccCCCCcccccccEEEEeeCCCCCCC
Q 021424 181 IPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLRENFSTPEVIAVKVPALLIMGDKDYFLK 260 (312)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~D~~~~ 260 (312)
.. ..+.+.+......+. + . ....... ++++|+|+|+|++|+++|
T Consensus 327 ~~--------------------~~~~~~l~~~l~~~s-------l-------~-~~~~l~~-~i~~PvLiI~G~~D~ivP 370 (414)
T PRK05077 327 MH--------------------DASDEALRVELNRYS-------L-------K-VQGLLGR-RCPTPMLSGYWKNDPFSP 370 (414)
T ss_pred CC--------------------CCChHHHHHHhhhcc-------c-------h-hhhhhcc-CCCCcEEEEecCCCCCCC
Confidence 00 001111111100000 0 0 0000011 689999999999999998
Q ss_pred CCCchhhhhccchhccCCCceEEEeCCCCCCCCCcChHHHHHHHHHHhhhc
Q 021424 261 FPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLNKH 311 (312)
Q Consensus 261 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~~~ 311 (312)
.+.. +.+.+..|+++++++|++ ++++.|+++++.+.+||.++
T Consensus 371 ~~~a------~~l~~~~~~~~l~~i~~~---~~~e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 371 EEDS------RLIASSSADGKLLEIPFK---PVYRNFDKALQEISDWLEDR 412 (414)
T ss_pred HHHH------HHHHHhCCCCeEEEccCC---CccCCHHHHHHHHHHHHHHH
Confidence 6433 244566799999999986 67789999999999999875
No 51
>PRK10985 putative hydrolase; Provisional
Probab=99.89 E-value=5.1e-22 Score=173.95 Aligned_cols=106 Identities=12% Similarity=0.149 Sum_probs=77.9
Q ss_pred CCceEEEECCCCCchhh--HHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCC---CHHHHHHHHHHHHHHhCCceEEE
Q 021424 24 DAHVVVFLHGFPEIWYS--WRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKT---SFQDMVDDLLAILDHLGLAKVFL 98 (312)
Q Consensus 24 ~~~~vlllHG~~~~~~~--~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~---~~~~~a~di~~~~~~l~~~~~~l 98 (312)
++|+||++||++++... +..++..|.+.||+|+++|+||||.|.... +..| ...+..+.+..+.++++.+++++
T Consensus 57 ~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~-~~~~~~~~~~D~~~~i~~l~~~~~~~~~~~ 135 (324)
T PRK10985 57 HKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRL-HRIYHSGETEDARFFLRWLQREFGHVPTAA 135 (324)
T ss_pred CCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCC-cceECCCchHHHHHHHHHHHHhCCCCCEEE
Confidence 46899999999887544 355778888899999999999999875321 1122 23333333333444567789999
Q ss_pred EEcCccHHHHHHHHHhcccc--cceeEEecCCCC
Q 021424 99 VAKDFGALTAYMFAIQHQER--VSGVITLGVPIL 130 (312)
Q Consensus 99 vGhS~Gg~va~~~a~~~p~~--v~~lv~~~~~~~ 130 (312)
+||||||.++..+++.+++. +.++|+++++..
T Consensus 136 vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~ 169 (324)
T PRK10985 136 VGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLM 169 (324)
T ss_pred EEecchHHHHHHHHHhhCCCCCccEEEEEcCCCC
Confidence 99999999999998887654 889998876643
No 52
>PLN02872 triacylglycerol lipase
Probab=99.89 E-value=3.3e-22 Score=177.54 Aligned_cols=123 Identities=20% Similarity=0.221 Sum_probs=92.6
Q ss_pred ccceeee-CCeEEEEEecC-------C-CCceEEEECCCCCchhhHH------HHHHHHhhCCcEEEeeCCCCCCCCCCC
Q 021424 5 EHKFIKV-QGLNLHIAEAG-------A-DAHVVVFLHGFPEIWYSWR------HQMVGVATAGFRAIAPDCRGYGLSDPP 69 (312)
Q Consensus 5 ~~~~~~~-~g~~i~~~~~g-------~-~~~~vlllHG~~~~~~~~~------~~~~~l~~~~~~vi~~Dl~G~G~S~~~ 69 (312)
+.+.++. ||..+...... . ++|+|||+||+++++..|. .++..|++.||+|+++|+||+|.|...
T Consensus 45 e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~gh 124 (395)
T PLN02872 45 TEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYGH 124 (395)
T ss_pred eEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccCC
Confidence 3444544 89888775531 1 3689999999999888883 233457778999999999999876321
Q ss_pred -------CCCCCCCHHHHH-HHHHHHHHHh---CCceEEEEEcCccHHHHHHHHHhccc---ccceeEEecCC
Q 021424 70 -------AEPEKTSFQDMV-DDLLAILDHL---GLAKVFLVAKDFGALTAYMFAIQHQE---RVSGVITLGVP 128 (312)
Q Consensus 70 -------~~~~~~~~~~~a-~di~~~~~~l---~~~~~~lvGhS~Gg~va~~~a~~~p~---~v~~lv~~~~~ 128 (312)
.....+++++++ .|+.++++++ ..+++++|||||||.+++.++ .+|+ +|++++++++.
T Consensus 125 ~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~ 196 (395)
T PLN02872 125 VTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPI 196 (395)
T ss_pred CCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcch
Confidence 111257899999 8999999987 347999999999999998544 6787 67888877654
No 53
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.88 E-value=4.4e-22 Score=181.54 Aligned_cols=107 Identities=10% Similarity=0.071 Sum_probs=89.4
Q ss_pred CCceEEEECCCCCchhhHH-----HHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEE
Q 021424 24 DAHVVVFLHGFPEIWYSWR-----HQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFL 98 (312)
Q Consensus 24 ~~~~vlllHG~~~~~~~~~-----~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~~~~l 98 (312)
.++|||++||+....+.|+ .++..|.+.||+|+++|++|+|.|+......+|....+.+.+..+++.++.+++++
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~~kv~l 266 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGEKQVNC 266 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCCCCeEE
Confidence 4689999999988888775 68888998999999999999999876543446766778888999999999999999
Q ss_pred EEcCccHHHHH----HHHHhc-ccccceeEEecCCCC
Q 021424 99 VAKDFGALTAY----MFAIQH-QERVSGVITLGVPIL 130 (312)
Q Consensus 99 vGhS~Gg~va~----~~a~~~-p~~v~~lv~~~~~~~ 130 (312)
|||||||.++. .+++.+ |++|+++|+++++..
T Consensus 267 vG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~D 303 (532)
T TIGR01838 267 VGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLD 303 (532)
T ss_pred EEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcC
Confidence 99999999852 356666 889999999987643
No 54
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.88 E-value=1.2e-20 Score=158.74 Aligned_cols=116 Identities=40% Similarity=0.651 Sum_probs=95.7
Q ss_pred eeCCeEEEEEecCCCCceEEEECCCCCchhhHHHHHHHHhhC--CcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 021424 10 KVQGLNLHIAEAGADAHVVVFLHGFPEIWYSWRHQMVGVATA--GFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAI 87 (312)
Q Consensus 10 ~~~g~~i~~~~~g~~~~~vlllHG~~~~~~~~~~~~~~l~~~--~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~ 87 (312)
...+.++.|...+..+|+|+++||++++...|......+... .|+++++|+||||.|. . . .++...+++++..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~-~--~~~~~~~~~~~~~~ 81 (282)
T COG0596 6 AADGVRLAYREAGGGGPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-P-A--GYSLSAYADDLAAL 81 (282)
T ss_pred cCCCeEEEEeecCCCCCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-c-c--cccHHHHHHHHHHH
Confidence 346677888877744679999999999999998733333332 2899999999999997 1 1 34556669999999
Q ss_pred HHHhCCceEEEEEcCccHHHHHHHHHhcccccceeEEecCCC
Q 021424 88 LDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPI 129 (312)
Q Consensus 88 ~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~ 129 (312)
++.++.++++++||||||.++..++.++|++++++|++++..
T Consensus 82 ~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~ 123 (282)
T COG0596 82 LDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAP 123 (282)
T ss_pred HHHhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCC
Confidence 999999999999999999999999999999999999998653
No 55
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.88 E-value=1.8e-21 Score=157.55 Aligned_cols=112 Identities=20% Similarity=0.285 Sum_probs=93.1
Q ss_pred EEEEEecCC---CCceEEEECCCCCchhhHHHHHHHHhhC-CcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 021424 15 NLHIAEAGA---DAHVVVFLHGFPEIWYSWRHQMVGVATA-GFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDH 90 (312)
Q Consensus 15 ~i~~~~~g~---~~~~vlllHG~~~~~~~~~~~~~~l~~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~ 90 (312)
+++....++ .||.++++||++.|.-+|-.++..+..+ ..+|+|+|+||||.|-.. +..+.+.+.++.|+.+++++
T Consensus 61 t~n~Y~t~~~~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~-~e~dlS~eT~~KD~~~~i~~ 139 (343)
T KOG2564|consen 61 TFNVYLTLPSATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVE-NEDDLSLETMSKDFGAVIKE 139 (343)
T ss_pred eEEEEEecCCCCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccC-ChhhcCHHHHHHHHHHHHHH
Confidence 355444554 6899999999999999999988888763 568899999999999653 44578999999999999999
Q ss_pred h---CCceEEEEEcCccHHHHHHHHHh--cccccceeEEecCC
Q 021424 91 L---GLAKVFLVAKDFGALTAYMFAIQ--HQERVSGVITLGVP 128 (312)
Q Consensus 91 l---~~~~~~lvGhS~Gg~va~~~a~~--~p~~v~~lv~~~~~ 128 (312)
+ ...+++||||||||.||.+.|.. -|. +.+|+.+|..
T Consensus 140 ~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVV 181 (343)
T KOG2564|consen 140 LFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVV 181 (343)
T ss_pred HhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEe
Confidence 7 35679999999999999988865 376 8999998753
No 56
>PRK10566 esterase; Provisional
Probab=99.87 E-value=8.5e-21 Score=160.27 Aligned_cols=109 Identities=23% Similarity=0.275 Sum_probs=78.0
Q ss_pred EEEEecCC---CCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCH-------HHHHHHHH
Q 021424 16 LHIAEAGA---DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSF-------QDMVDDLL 85 (312)
Q Consensus 16 i~~~~~g~---~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~-------~~~a~di~ 85 (312)
++|...+. ..|+||++||++++...|..++..|.+.||+|+++|+||||.|..... ..++ ....+|+.
T Consensus 15 ~~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~--~~~~~~~~~~~~~~~~~~~ 92 (249)
T PRK10566 15 LHAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDE--ARRLNHFWQILLQNMQEFP 92 (249)
T ss_pred EEEcCCCCCCCCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCcc--ccchhhHHHHHHHHHHHHH
Confidence 55555432 358999999999998889888899988899999999999998643211 1111 12234444
Q ss_pred HHHHHh------CCceEEEEEcCccHHHHHHHHHhcccccceeEEec
Q 021424 86 AILDHL------GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLG 126 (312)
Q Consensus 86 ~~~~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~ 126 (312)
++++.+ +.++++++||||||.+++.+++++|+....+++++
T Consensus 93 ~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~ 139 (249)
T PRK10566 93 TLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMG 139 (249)
T ss_pred HHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeC
Confidence 444442 34689999999999999999999987544444443
No 57
>PRK11071 esterase YqiA; Provisional
Probab=99.87 E-value=6e-21 Score=153.82 Aligned_cols=87 Identities=18% Similarity=0.210 Sum_probs=73.2
Q ss_pred ceEEEECCCCCchhhHHHH-H-HHHhh--CCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEc
Q 021424 26 HVVVFLHGFPEIWYSWRHQ-M-VGVAT--AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAK 101 (312)
Q Consensus 26 ~~vlllHG~~~~~~~~~~~-~-~~l~~--~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~~~~lvGh 101 (312)
|+|||+|||+++...|... + +.+.+ .+|+|+++|+|||| .++++++.+++++++.++++++||
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-------------~~~~~~l~~l~~~~~~~~~~lvG~ 68 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP-------------ADAAELLESLVLEHGGDPLGLVGS 68 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH-------------HHHHHHHHHHHHHcCCCCeEEEEE
Confidence 6899999999999999853 2 44433 26999999999985 358899999999999999999999
Q ss_pred CccHHHHHHHHHhcccccceeEEecCC
Q 021424 102 DFGALTAYMFAIQHQERVSGVITLGVP 128 (312)
Q Consensus 102 S~Gg~va~~~a~~~p~~v~~lv~~~~~ 128 (312)
||||.+++.+|.++|. ++|+++++
T Consensus 69 S~Gg~~a~~~a~~~~~---~~vl~~~~ 92 (190)
T PRK11071 69 SLGGYYATWLSQCFML---PAVVVNPA 92 (190)
T ss_pred CHHHHHHHHHHHHcCC---CEEEECCC
Confidence 9999999999999994 35667654
No 58
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.86 E-value=1.1e-22 Score=169.16 Aligned_cols=76 Identities=33% Similarity=0.541 Sum_probs=70.0
Q ss_pred cEEEeeCCCCCCCCCC--CCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEcCccHHHHHHHHHhcccccceeEEecCC
Q 021424 53 FRAIAPDCRGYGLSDP--PAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 128 (312)
Q Consensus 53 ~~vi~~Dl~G~G~S~~--~~~~~~~~~~~~a~di~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 128 (312)
|+||++|+||+|.|+. ......++..++++++..+++.+++++++++||||||.+++.+|+.+|++|+++|+++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~ 78 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPP 78 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeee
Confidence 7999999999999994 134467899999999999999999999999999999999999999999999999998764
No 59
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.86 E-value=4.4e-20 Score=163.48 Aligned_cols=101 Identities=14% Similarity=0.155 Sum_probs=82.6
Q ss_pred CceEEEECCCCCchhhH-----HHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHH-----HHHHHHHhCCc
Q 021424 25 AHVVVFLHGFPEIWYSW-----RHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDD-----LLAILDHLGLA 94 (312)
Q Consensus 25 ~~~vlllHG~~~~~~~~-----~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~d-----i~~~~~~l~~~ 94 (312)
++|||++||+..+...| +.++..|.+.||+|+++|++|+|.|+. .+++.+++++ +..+.+..+.+
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~-----~~~~~d~~~~~~~~~v~~l~~~~~~~ 136 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADR-----YLTLDDYINGYIDKCVDYICRTSKLD 136 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHh-----cCCHHHHHHHHHHHHHHHHHHHhCCC
Confidence 56899999987666554 578889999999999999999998763 3466666533 44455567889
Q ss_pred eEEEEEcCccHHHHHHHHHhcccccceeEEecCCCC
Q 021424 95 KVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPIL 130 (312)
Q Consensus 95 ~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~ 130 (312)
+++++||||||.+++.+++.+|++|+++|+++++..
T Consensus 137 ~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~ 172 (350)
T TIGR01836 137 QISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVD 172 (350)
T ss_pred cccEEEECHHHHHHHHHHHhCchheeeEEEeccccc
Confidence 999999999999999999999999999999987653
No 60
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.84 E-value=9.5e-20 Score=180.89 Aligned_cols=103 Identities=20% Similarity=0.279 Sum_probs=83.4
Q ss_pred CCceEEEECCCCCchhhHHHH-----HHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hCCce
Q 021424 24 DAHVVVFLHGFPEIWYSWRHQ-----MVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDH---LGLAK 95 (312)
Q Consensus 24 ~~~~vlllHG~~~~~~~~~~~-----~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~---l~~~~ 95 (312)
.++||||||||+.+.+.|+.+ ++.|.+.||+|+++| +|.|+.+.....+++.+++..+.+.++. +..++
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d---~G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~~~ 142 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVID---FGSPDKVEGGMERNLADHVVALSEAIDTVKDVTGRD 142 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEc---CCCCChhHcCccCCHHHHHHHHHHHHHHHHHhhCCc
Confidence 568999999999999999865 678888899999999 5777765332346777777776666655 45679
Q ss_pred EEEEEcCccHHHHHHHHHhc-ccccceeEEecCCC
Q 021424 96 VFLVAKDFGALTAYMFAIQH-QERVSGVITLGVPI 129 (312)
Q Consensus 96 ~~lvGhS~Gg~va~~~a~~~-p~~v~~lv~~~~~~ 129 (312)
+++|||||||.+++.+|+.+ |++|+++|+++++.
T Consensus 143 v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~ 177 (994)
T PRK07868 143 VHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPV 177 (994)
T ss_pred eEEEEEChhHHHHHHHHHhcCCCccceEEEEeccc
Confidence 99999999999999998865 56899999988764
No 61
>PRK13604 luxD acyl transferase; Provisional
Probab=99.83 E-value=5.2e-19 Score=149.69 Aligned_cols=118 Identities=21% Similarity=0.259 Sum_probs=88.4
Q ss_pred cceeee-CCeEEEEEecCC------CCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCC-CCCCCCCCCCCCCH
Q 021424 6 HKFIKV-QGLNLHIAEAGA------DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGY-GLSDPPAEPEKTSF 77 (312)
Q Consensus 6 ~~~~~~-~g~~i~~~~~g~------~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~-G~S~~~~~~~~~~~ 77 (312)
.+.+.+ +|.+|.-+..-+ ..++||+.|||.++...+...+..|.+.||.|+.+|.||| |.|+..- ..+++
T Consensus 11 ~~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~--~~~t~ 88 (307)
T PRK13604 11 DHVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTI--DEFTM 88 (307)
T ss_pred hheEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCcc--ccCcc
Confidence 345555 888888765443 2368999999999887788899999999999999999998 9996432 23344
Q ss_pred HHHHHHHHHHHHHh---CCceEEEEEcCccHHHHHHHHHhcccccceeEEecC
Q 021424 78 QDMVDDLLAILDHL---GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGV 127 (312)
Q Consensus 78 ~~~a~di~~~~~~l---~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~ 127 (312)
....+|+.+.++.+ +.+++.|+||||||.+|+..|+.. +++++|+.++
T Consensus 89 s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp 139 (307)
T PRK13604 89 SIGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLITAVG 139 (307)
T ss_pred cccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCC
Confidence 44567775555554 677899999999999997766643 3888776543
No 62
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.82 E-value=2e-19 Score=151.04 Aligned_cols=128 Identities=22% Similarity=0.361 Sum_probs=109.8
Q ss_pred CccccceeeeCCeEEEEEecCC-------CCceEEEECCCCCchhhHHHHHHHHhhC---------CcEEEeeCCCCCCC
Q 021424 2 DQIEHKFIKVQGLNLHIAEAGA-------DAHVVVFLHGFPEIWYSWRHQMVGVATA---------GFRAIAPDCRGYGL 65 (312)
Q Consensus 2 ~~~~~~~~~~~g~~i~~~~~g~-------~~~~vlllHG~~~~~~~~~~~~~~l~~~---------~~~vi~~Dl~G~G~ 65 (312)
+++.+-..+|.|++|||....+ .--|||++||||++-+.|.+.++-|.+. .|.||||.+||+|-
T Consensus 122 n~f~qykTeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygw 201 (469)
T KOG2565|consen 122 NQFKQYKTEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGW 201 (469)
T ss_pred HhhhhhhhhhcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCccc
Confidence 4566778889999999987653 1238999999999999999988777643 27999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEcCccHHHHHHHHHhcccccceeEEecCCCC
Q 021424 66 SDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPIL 130 (312)
Q Consensus 66 S~~~~~~~~~~~~~~a~di~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~ 130 (312)
|+.+... .++..+.|.-+..++=.||.+++.+-|-+||+.|+..+|..+|++|.++-+..|...
T Consensus 202 Sd~~sk~-GFn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~~~~ 265 (469)
T KOG2565|consen 202 SDAPSKT-GFNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCFVN 265 (469)
T ss_pred CcCCccC-CccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhcccccC
Confidence 9987653 678888999999999999999999999999999999999999999999997665544
No 63
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.82 E-value=3.7e-19 Score=149.69 Aligned_cols=102 Identities=23% Similarity=0.180 Sum_probs=85.4
Q ss_pred CceEEEECCCCCc----hhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH---HHhCCceEE
Q 021424 25 AHVVVFLHGFPEI----WYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAIL---DHLGLAKVF 97 (312)
Q Consensus 25 ~~~vlllHG~~~~----~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~---~~l~~~~~~ 97 (312)
.++|||+|||+++ ...|..+++.|.+.||+|+++|+||||.|+... ..+++..+++|+.+++ ++++.++++
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~--~~~~~~~~~~Dv~~ai~~L~~~~~~~v~ 102 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDF--AAARWDVWKEDVAAAYRWLIEQGHPPVT 102 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcc--ccCCHHHHHHHHHHHHHHHHhcCCCCEE
Confidence 4689999999864 346777788898889999999999999997542 2457888889887754 445778999
Q ss_pred EEEcCccHHHHHHHHHhcccccceeEEecCC
Q 021424 98 LVAKDFGALTAYMFAIQHQERVSGVITLGVP 128 (312)
Q Consensus 98 lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 128 (312)
++||||||.+++.+|.++|++++++|++++.
T Consensus 103 LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~ 133 (266)
T TIGR03101 103 LWGLRLGALLALDAANPLAAKCNRLVLWQPV 133 (266)
T ss_pred EEEECHHHHHHHHHHHhCccccceEEEeccc
Confidence 9999999999999999999999999998754
No 64
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.76 E-value=1.6e-17 Score=128.28 Aligned_cols=93 Identities=25% Similarity=0.375 Sum_probs=75.6
Q ss_pred eEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEcCccHH
Q 021424 27 VVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGAL 106 (312)
Q Consensus 27 ~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~~~~lvGhS~Gg~ 106 (312)
+||++||++++...|...++.|.+.||.|+++|+||+|.+... ....++.+++. .+..+.+++.++|||+||.
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~-----~~~~~~~~~~~--~~~~~~~~i~l~G~S~Gg~ 73 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDGA-----DAVERVLADIR--AGYPDPDRIILIGHSMGGA 73 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHHS-----HHHHHHHHHHH--HHHCTCCEEEEEEETHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccchh-----HHHHHHHHHHH--hhcCCCCcEEEEEEccCcH
Confidence 6899999999999999999999999999999999999998321 12333333333 1123778999999999999
Q ss_pred HHHHHHHhcccccceeEEecC
Q 021424 107 TAYMFAIQHQERVSGVITLGV 127 (312)
Q Consensus 107 va~~~a~~~p~~v~~lv~~~~ 127 (312)
+++.++..+ .+++++|++++
T Consensus 74 ~a~~~~~~~-~~v~~~v~~~~ 93 (145)
T PF12695_consen 74 IAANLAARN-PRVKAVVLLSP 93 (145)
T ss_dssp HHHHHHHHS-TTESEEEEESE
T ss_pred HHHHHhhhc-cceeEEEEecC
Confidence 999999998 78999998863
No 65
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.73 E-value=4.1e-17 Score=145.17 Aligned_cols=104 Identities=14% Similarity=0.201 Sum_probs=84.0
Q ss_pred CCCceEEEECCCCCch--hhHHH-HHHHHhh--CCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------
Q 021424 23 ADAHVVVFLHGFPEIW--YSWRH-QMVGVAT--AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL------ 91 (312)
Q Consensus 23 ~~~~~vlllHG~~~~~--~~~~~-~~~~l~~--~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l------ 91 (312)
+++|++|+||||+++. ..|.. +...|.. .+|+||++|++|||.|..+.. .. .....++++.++++.|
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a-~~-~t~~vg~~la~lI~~L~~~~gl 116 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTS-AA-YTKLVGKDVAKFVNWMQEEFNY 116 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccc-cc-cHHHHHHHHHHHHHHHHHhhCC
Confidence 3679999999998653 56875 4455542 259999999999999875432 23 3467888888888876
Q ss_pred CCceEEEEEcCccHHHHHHHHHhcccccceeEEecCC
Q 021424 92 GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 128 (312)
Q Consensus 92 ~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 128 (312)
+++++|||||||||.||..++..+|++|.+||.+|++
T Consensus 117 ~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPA 153 (442)
T TIGR03230 117 PWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPA 153 (442)
T ss_pred CCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCC
Confidence 4789999999999999999999999999999999875
No 66
>PRK11460 putative hydrolase; Provisional
Probab=99.73 E-value=2.3e-16 Score=131.41 Aligned_cols=179 Identities=14% Similarity=0.096 Sum_probs=116.0
Q ss_pred CCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCC---------CCCC---CHHHHHHHHHHHH---
Q 021424 24 DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAE---------PEKT---SFQDMVDDLLAIL--- 88 (312)
Q Consensus 24 ~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~---------~~~~---~~~~~a~di~~~~--- 88 (312)
..|.|||+||++++...|..+++.|...++.+..++++|...+..... .... ++.+..+.+.+++
T Consensus 15 ~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 94 (232)
T PRK11460 15 AQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRYW 94 (232)
T ss_pred CCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHHH
Confidence 467899999999999999999998876555555556666543321100 0011 1223333333333
Q ss_pred -HHhCC--ceEEEEEcCccHHHHHHHHHhcccccceeEEecCCCCCCCcchhhhccCcchhhhhcCCcchhhhhccCCcH
Q 021424 89 -DHLGL--AKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRLDA 165 (312)
Q Consensus 89 -~~l~~--~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (312)
+.+++ ++++++|+|+||.+++.++.++|+.+.+++.+.+...
T Consensus 95 ~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~----------------------------------- 139 (232)
T PRK11460 95 QQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYA----------------------------------- 139 (232)
T ss_pred HHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccc-----------------------------------
Confidence 33444 4799999999999999999999987777765421000
Q ss_pred HHHHHHHHHhhcCCCCCCCcchhhhhhhcCCCCCCCCCCCHHHHHHHHHhhccCCCCccccccccccccccCCCCccccc
Q 021424 166 KTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLRENFSTPEVIAVK 245 (312)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 245 (312)
. .+ . .. ..+
T Consensus 140 -----------~---~~-------------------~-------------------------------------~~-~~~ 148 (232)
T PRK11460 140 -----------S---LP-------------------E-------------------------------------TA-PTA 148 (232)
T ss_pred -----------c---cc-------------------c-------------------------------------cc-cCC
Confidence 0 00 0 00 235
Q ss_pred ccEEEEeeCCCCCCCCCCchhhhhccchhccCCCceEEEeCCCCCCCCCcChHHHHHHHHHHhhh
Q 021424 246 VPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLNK 310 (312)
Q Consensus 246 ~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~~ 310 (312)
.|+++++|++|+++|.+...... ..+++.-.+++++.++++||....+.-+...+.+.++|.+
T Consensus 149 ~pvli~hG~~D~vvp~~~~~~~~--~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l~~ 211 (232)
T PRK11460 149 TTIHLIHGGEDPVIDVAHAVAAQ--EALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYTVPK 211 (232)
T ss_pred CcEEEEecCCCCccCHHHHHHHH--HHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHHcch
Confidence 79999999999999865544332 2333333467899999999999876666666767666643
No 67
>PLN02442 S-formylglutathione hydrolase
Probab=99.72 E-value=5.8e-16 Score=132.86 Aligned_cols=105 Identities=16% Similarity=0.228 Sum_probs=77.0
Q ss_pred CCceEEEECCCCCchhhHHHH---HHHHhhCCcEEEeeCCCCCCC-----CCCC------------C-------CCCCCC
Q 021424 24 DAHVVVFLHGFPEIWYSWRHQ---MVGVATAGFRAIAPDCRGYGL-----SDPP------------A-------EPEKTS 76 (312)
Q Consensus 24 ~~~~vlllHG~~~~~~~~~~~---~~~l~~~~~~vi~~Dl~G~G~-----S~~~------------~-------~~~~~~ 76 (312)
..|+|+|+||++++...|... ...+...++.|+++|..++|. ++.. . ....+-
T Consensus 46 ~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (283)
T PLN02442 46 KVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYV 125 (283)
T ss_pred CCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhH
Confidence 458999999999988877542 244455689999999988771 1100 0 000222
Q ss_pred HHHHHHHHHHHHHHhCCceEEEEEcCccHHHHHHHHHhcccccceeEEecCC
Q 021424 77 FQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 128 (312)
Q Consensus 77 ~~~~a~di~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 128 (312)
.+++.+.+.++.+.++.++++++||||||..++.+|.++|+++++++.+++.
T Consensus 126 ~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 177 (283)
T PLN02442 126 VKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPI 177 (283)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCc
Confidence 4445556666666678899999999999999999999999999999887654
No 68
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.70 E-value=2.7e-15 Score=128.44 Aligned_cols=105 Identities=19% Similarity=0.300 Sum_probs=78.5
Q ss_pred CCceEEEECCCCCchhhHHH--HHHHHhh-CCcEEEeeCC--CCCCCCCCC------------------CCCCCCCHHH-
Q 021424 24 DAHVVVFLHGFPEIWYSWRH--QMVGVAT-AGFRAIAPDC--RGYGLSDPP------------------AEPEKTSFQD- 79 (312)
Q Consensus 24 ~~~~vlllHG~~~~~~~~~~--~~~~l~~-~~~~vi~~Dl--~G~G~S~~~------------------~~~~~~~~~~- 79 (312)
+.|+|+|+||++++...|.. .+..+++ .|+.||+||. +|+|.+... +....+++.+
T Consensus 41 ~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~ 120 (275)
T TIGR02821 41 PVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSY 120 (275)
T ss_pred CCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHH
Confidence 35899999999999988853 2345543 4899999998 666644311 0001234444
Q ss_pred HHHHHHHHHHH---hCCceEEEEEcCccHHHHHHHHHhcccccceeEEecCC
Q 021424 80 MVDDLLAILDH---LGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 128 (312)
Q Consensus 80 ~a~di~~~~~~---l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 128 (312)
.++++..++++ ++.+++.++||||||.+++.+|.++|+++++++++++.
T Consensus 121 ~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 172 (275)
T TIGR02821 121 IVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPI 172 (275)
T ss_pred HHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCc
Confidence 47888888887 35678999999999999999999999999999987654
No 69
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.70 E-value=5.2e-15 Score=121.51 Aligned_cols=113 Identities=20% Similarity=0.348 Sum_probs=97.5
Q ss_pred EEEEEecCCCC-c--eEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 021424 15 NLHIAEAGADA-H--VVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL 91 (312)
Q Consensus 15 ~i~~~~~g~~~-~--~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l 91 (312)
+-.|....++| | +||-+||-|+|..+|+.+.+.|.+.|.|+|++.+||+|.++.++. -.|+-.+-+.-+.++++.|
T Consensus 22 ~a~y~D~~~~gs~~gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~-~~~~n~er~~~~~~ll~~l 100 (297)
T PF06342_consen 22 QAVYEDSLPSGSPLGTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPD-QQYTNEERQNFVNALLDEL 100 (297)
T ss_pred EEEEEecCCCCCCceeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcc-cccChHHHHHHHHHHHHHc
Confidence 34466655432 3 799999999999999999999999999999999999999987643 5789999999999999999
Q ss_pred CCce-EEEEEcCccHHHHHHHHHhcccccceeEEecCCCC
Q 021424 92 GLAK-VFLVAKDFGALTAYMFAIQHQERVSGVITLGVPIL 130 (312)
Q Consensus 92 ~~~~-~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~ 130 (312)
+++. +.++|||+||-.|+.+|+.+| +.++++++++..
T Consensus 101 ~i~~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~ 138 (297)
T PF06342_consen 101 GIKGKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPGL 138 (297)
T ss_pred CCCCceEEEEeccchHHHHHHHhcCc--cceEEEecCCcc
Confidence 9875 778999999999999999996 779999987644
No 70
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.68 E-value=8.8e-17 Score=136.95 Aligned_cols=114 Identities=17% Similarity=0.226 Sum_probs=86.6
Q ss_pred CeEEEEEecCCCCceEEEECCCCCch-hhHHHHH-HHHhh-CCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 021424 13 GLNLHIAEAGADAHVVVFLHGFPEIW-YSWRHQM-VGVAT-AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILD 89 (312)
Q Consensus 13 g~~i~~~~~g~~~~~vlllHG~~~~~-~~~~~~~-~~l~~-~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~ 89 (312)
+..+.+...++++|++|+||||.++. ..|...+ ..++. .+|+||++|++|++.+..+ ...+++...++++.++++
T Consensus 24 ~~~~~~~~f~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~--~a~~~~~~v~~~la~~l~ 101 (275)
T cd00707 24 PSSLKNSNFNPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYP--QAVNNTRVVGAELAKFLD 101 (275)
T ss_pred hhhhhhcCCCCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChH--HHHHhHHHHHHHHHHHHH
Confidence 44566655565689999999999887 6776544 44544 4799999999998443221 123456666677777777
Q ss_pred Hh------CCceEEEEEcCccHHHHHHHHHhcccccceeEEecCC
Q 021424 90 HL------GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 128 (312)
Q Consensus 90 ~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 128 (312)
.| +.+++++|||||||.||..+|..+|++|.++|.++++
T Consensus 102 ~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa 146 (275)
T cd00707 102 FLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPA 146 (275)
T ss_pred HHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCC
Confidence 65 4578999999999999999999999999999999865
No 71
>PLN00021 chlorophyllase
Probab=99.67 E-value=4.2e-15 Score=128.47 Aligned_cols=102 Identities=24% Similarity=0.302 Sum_probs=74.2
Q ss_pred CCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-------hCCceE
Q 021424 24 DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDH-------LGLAKV 96 (312)
Q Consensus 24 ~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~-------l~~~~~ 96 (312)
+.|+|||+||++.+...|..+++.|.+.||.|+++|++|++.+.... ...+..+..+.+.+.++. .+.+++
T Consensus 51 ~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~~--~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v 128 (313)
T PLN00021 51 TYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDGTD--EIKDAAAVINWLSSGLAAVLPEGVRPDLSKL 128 (313)
T ss_pred CCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCchh--hHHHHHHHHHHHHhhhhhhcccccccChhhe
Confidence 56899999999999889999999999889999999999976432111 011122223333332222 345789
Q ss_pred EEEEcCccHHHHHHHHHhccc-----ccceeEEecC
Q 021424 97 FLVAKDFGALTAYMFAIQHQE-----RVSGVITLGV 127 (312)
Q Consensus 97 ~lvGhS~Gg~va~~~a~~~p~-----~v~~lv~~~~ 127 (312)
+++||||||.+++.+|..+|+ +++++|.+++
T Consensus 129 ~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldP 164 (313)
T PLN00021 129 ALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDP 164 (313)
T ss_pred EEEEECcchHHHHHHHhhccccccccceeeEEeecc
Confidence 999999999999999999985 5677776653
No 72
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.66 E-value=5.2e-15 Score=139.94 Aligned_cols=230 Identities=18% Similarity=0.248 Sum_probs=140.1
Q ss_pred cceeee-CCeEEEEEecCC---CC----ceEEEECCCCCchhh--HHHHHHHHhhCCcEEEeeCCCCCCCCCC---C---
Q 021424 6 HKFIKV-QGLNLHIAEAGA---DA----HVVVFLHGFPEIWYS--WRHQMVGVATAGFRAIAPDCRGYGLSDP---P--- 69 (312)
Q Consensus 6 ~~~~~~-~g~~i~~~~~g~---~~----~~vlllHG~~~~~~~--~~~~~~~l~~~~~~vi~~Dl~G~G~S~~---~--- 69 (312)
...+.. +|.++++....+ +. |.||++||.|..... |....+.|+..||-|+.++.||-+.-.. .
T Consensus 367 ~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~ 446 (620)
T COG1506 367 PVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIR 446 (620)
T ss_pred EEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhh
Confidence 334444 798999877654 22 789999999855444 5556678888999999999996554211 1
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhC-Cc--eEEEEEcCccHHHHHHHHHhcccccceeEEecCCCCCCCcchhhhccCcchh
Q 021424 70 AEPEKTSFQDMVDDLLAILDHLG-LA--KVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFY 146 (312)
Q Consensus 70 ~~~~~~~~~~~a~di~~~~~~l~-~~--~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~ 146 (312)
.+.....++++.+.+. +++..+ ++ ++.+.|||+||+.++..+.+.| ++++.+...+...- .
T Consensus 447 ~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~-----~--------- 510 (620)
T COG1506 447 GDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDW-----L--------- 510 (620)
T ss_pred hccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchh-----h---------
Confidence 1112335555555555 444444 44 7999999999999999999999 67776655332110 0
Q ss_pred hhhcCCcchhhhhccCCcHHHHHHHHHHhhcCCCCCCCcchhhhhhhcCCCCCCCCCCCHHHHHHHHHhhccCCCCcccc
Q 021424 147 ISRWQEPGRAEADFGRLDAKTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQ 226 (312)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (312)
.... ... ..+.. ..++.. .. +.+ ..+.+...
T Consensus 511 -~~~~----------~~~---------~~~~~-------~~~~~~---~~----~~~-~~~~~~~~-------------- 541 (620)
T COG1506 511 -LYFG----------EST---------EGLRF-------DPEENG---GG----PPE-DREKYEDR-------------- 541 (620)
T ss_pred -hhcc----------ccc---------hhhcC-------CHHHhC---CC----ccc-ChHHHHhc--------------
Confidence 0000 000 00000 000000 00 000 11111100
Q ss_pred ccccccccccCCCCcccccccEEEEeeCCCCCCCCCCchhhhhccchhccCCCceEEEeCCCCCCCCC-cChHHHHHHHH
Q 021424 227 VPYRTLRENFSTPEVIAVKVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQE-QSPEEVNQLIL 305 (312)
Q Consensus 227 ~~~~~~~~~~~~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~GH~~~~-e~p~~~~~~i~ 305 (312)
.+ .....++++|+|+|+|++|.-++.+....++. .+++.--.++++++|+.||.+.. ++-..+.+.+.
T Consensus 542 ------sp---~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~--aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~ 610 (620)
T COG1506 542 ------SP---IFYADNIKTPLLLIHGEEDDRVPIEQAEQLVD--ALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEIL 610 (620)
T ss_pred ------Ch---hhhhcccCCCEEEEeecCCccCChHHHHHHHH--HHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHH
Confidence 00 00011789999999999999998776665553 44545566899999999998877 55677888888
Q ss_pred HHhhhc
Q 021424 306 TFLNKH 311 (312)
Q Consensus 306 ~fl~~~ 311 (312)
+|++++
T Consensus 611 ~~~~~~ 616 (620)
T COG1506 611 DWFKRH 616 (620)
T ss_pred HHHHHH
Confidence 888764
No 73
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.66 E-value=5.4e-15 Score=115.80 Aligned_cols=105 Identities=19% Similarity=0.285 Sum_probs=82.5
Q ss_pred ecCCCCceEEEECCCCCchhh--HHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCce--
Q 021424 20 EAGADAHVVVFLHGFPEIWYS--WRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAK-- 95 (312)
Q Consensus 20 ~~g~~~~~vlllHG~~~~~~~--~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~~-- 95 (312)
+.| +...||+.|||-++... ..-++.+|...|+.++.+|.+|-|.|+..-.+..|. ..|+|+..+++++.-..
T Consensus 29 ~tg-s~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~--~eadDL~sV~q~~s~~nr~ 105 (269)
T KOG4667|consen 29 ETG-STEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYN--TEADDLHSVIQYFSNSNRV 105 (269)
T ss_pred ccC-CceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCccc--chHHHHHHHHHHhccCceE
Confidence 345 45789999999887664 334667777889999999999999998764444444 45799999999985332
Q ss_pred -EEEEEcCccHHHHHHHHHhcccccceeEEecCC
Q 021424 96 -VFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 128 (312)
Q Consensus 96 -~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 128 (312)
-+++|||-||-+++.+|+++++ ++-+|.+..-
T Consensus 106 v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGR 138 (269)
T KOG4667|consen 106 VPVILGHSKGGDVVLLYASKYHD-IRNVINCSGR 138 (269)
T ss_pred EEEEEeecCccHHHHHHHHhhcC-chheEEcccc
Confidence 4578999999999999999988 7778877543
No 74
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.65 E-value=1.2e-15 Score=143.64 Aligned_cols=109 Identities=21% Similarity=0.188 Sum_probs=88.8
Q ss_pred ceeeeCCeEEEEEecCCCC----------ceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCC-----
Q 021424 7 KFIKVQGLNLHIAEAGADA----------HVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAE----- 71 (312)
Q Consensus 7 ~~~~~~g~~i~~~~~g~~~----------~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~----- 71 (312)
.++..+|.+|.|...|.++ |+|||+||++++...|..++..|.+.||+|+++|+||||.|....+
T Consensus 421 ~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~ 500 (792)
T TIGR03502 421 LLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVN 500 (792)
T ss_pred EEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCcccccccccccc
Confidence 4455578788877655322 4899999999999999999999987899999999999999955311
Q ss_pred -----CCC-----------CCHHHHHHHHHHHHHHhC----------------CceEEEEEcCccHHHHHHHHHhc
Q 021424 72 -----PEK-----------TSFQDMVDDLLAILDHLG----------------LAKVFLVAKDFGALTAYMFAIQH 115 (312)
Q Consensus 72 -----~~~-----------~~~~~~a~di~~~~~~l~----------------~~~~~lvGhS~Gg~va~~~a~~~ 115 (312)
... .++.+.+.|+..+...++ ..+++++||||||.++..+++..
T Consensus 501 a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 501 ATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred ccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 111 278999999999999887 35899999999999999999764
No 75
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.63 E-value=1.2e-13 Score=113.31 Aligned_cols=260 Identities=20% Similarity=0.277 Sum_probs=156.0
Q ss_pred EEEEEecCC---CCceEEEECCCCCchhh-HHH-----HHHHHhhCCcEEEeeCCCCCCCCCCC--CCCCCCCHHHHHHH
Q 021424 15 NLHIAEAGA---DAHVVVFLHGFPEIWYS-WRH-----QMVGVATAGFRAIAPDCRGYGLSDPP--AEPEKTSFQDMVDD 83 (312)
Q Consensus 15 ~i~~~~~g~---~~~~vlllHG~~~~~~~-~~~-----~~~~l~~~~~~vi~~Dl~G~G~S~~~--~~~~~~~~~~~a~d 83 (312)
.+++...|. ++|+++=.|..+-+..+ |.. .+..+++ +|-++-+|.|||-.-... .+-..-|++++|++
T Consensus 33 ~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~-~fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~ 111 (326)
T KOG2931|consen 33 VVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILE-HFCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADM 111 (326)
T ss_pred cEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHh-heEEEecCCCccccCCccCCCCCCCCCHHHHHHH
Confidence 477777785 37899999998876665 443 2345555 599999999999755432 22124599999999
Q ss_pred HHHHHHHhCCceEEEEEcCccHHHHHHHHHhcccccceeEEecCCCCCCCcchhhhccCcchhhhhcCCcchhhhhccCC
Q 021424 84 LLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRL 163 (312)
Q Consensus 84 i~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (312)
|..++++++++.++-+|---|++|-.++|..||+||.+||++++.....+-..+ ....+..+.|..-+. ..
T Consensus 112 l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwiew---~~~K~~s~~l~~~Gm-----t~- 182 (326)
T KOG2931|consen 112 LPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWIEW---AYNKVSSNLLYYYGM-----TQ- 182 (326)
T ss_pred HHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHHHH---HHHHHHHHHHHhhch-----hh-
Confidence 999999999999999999999999999999999999999999876544321111 000000000000000 00
Q ss_pred cHHHHHHHHHHhhcCCCCCCCcch-hhhhhhcCCCCCCCCCCCHHHHHHHHHhhccCCCCccccccccccccccCCCCcc
Q 021424 164 DAKTVVRNIYILFSRSEIPIAPEN-KEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLRENFSTPEVI 242 (312)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (312)
...+.+- .+.|+........+. ++....+. .......+..|..++.... .+.........
T Consensus 183 ~~~d~ll--~H~Fg~e~~~~~~diVq~Yr~~l~------~~~N~~Nl~~fl~ayn~R~----------DL~~~r~~~~~- 243 (326)
T KOG2931|consen 183 GVKDYLL--AHHFGKEELGNNSDIVQEYRQHLG------ERLNPKNLALFLNAYNGRR----------DLSIERPKLGT- 243 (326)
T ss_pred hHHHHHH--HHHhccccccccHHHHHHHHHHHH------hcCChhHHHHHHHHhcCCC----------CccccCCCcCc-
Confidence 0111111 122322211110000 11111111 1123334555655554311 11000000111
Q ss_pred cccccEEEEeeCCCCCCCCCCchhhhhccchhccCCCceEEEeCCCCCCCCCcChHHHHHHHHHHhh
Q 021424 243 AVKVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLN 309 (312)
Q Consensus 243 ~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~ 309 (312)
.++||+|++.|++.+.++. +.+.. .++. -.+.++..+.+||=.++.++|+++++.+.=|+.
T Consensus 244 tlkc~vllvvGd~Sp~~~~--vv~~n--~~Ld--p~~ttllk~~d~g~l~~e~qP~kl~ea~~~Flq 304 (326)
T KOG2931|consen 244 TLKCPVLLVVGDNSPHVSA--VVECN--SKLD--PTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQ 304 (326)
T ss_pred cccccEEEEecCCCchhhh--hhhhh--cccC--cccceEEEEcccCCcccccCchHHHHHHHHHHc
Confidence 5789999999999987642 22211 1111 235789999999999999999999999998885
No 76
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.63 E-value=1.7e-14 Score=122.90 Aligned_cols=118 Identities=23% Similarity=0.361 Sum_probs=91.4
Q ss_pred eCCeEEEEEecCC----CCceEEEECCCCCchhh----------H-HHHHH---HHhhCCcEEEeeCCCCCC-CCCCCC-
Q 021424 11 VQGLNLHIAEAGA----DAHVVVFLHGFPEIWYS----------W-RHQMV---GVATAGFRAIAPDCRGYG-LSDPPA- 70 (312)
Q Consensus 11 ~~g~~i~~~~~g~----~~~~vlllHG~~~~~~~----------~-~~~~~---~l~~~~~~vi~~Dl~G~G-~S~~~~- 70 (312)
+.+..|.|+++|. ...+||+.||+.+++.. | +.++- .+-...|.|||.|..|.+ .|..|.
T Consensus 33 l~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s 112 (368)
T COG2021 33 LSDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSS 112 (368)
T ss_pred ccCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCC
Confidence 3677899999995 24689999999874432 3 33221 122345999999999998 444441
Q ss_pred -CC---------CCCCHHHHHHHHHHHHHHhCCceEE-EEEcCccHHHHHHHHHhcccccceeEEecCC
Q 021424 71 -EP---------EKTSFQDMVDDLLAILDHLGLAKVF-LVAKDFGALTAYMFAIQHQERVSGVITLGVP 128 (312)
Q Consensus 71 -~~---------~~~~~~~~a~di~~~~~~l~~~~~~-lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 128 (312)
++ ..+|+.|++..-..++++||++++. +||-||||+.++..|..|||+|++++.++++
T Consensus 113 ~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~ 181 (368)
T COG2021 113 INPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATA 181 (368)
T ss_pred cCCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheeccc
Confidence 11 2468899999889999999999977 7899999999999999999999999988754
No 77
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.62 E-value=5.6e-15 Score=121.76 Aligned_cols=196 Identities=18% Similarity=0.252 Sum_probs=114.7
Q ss_pred HHHHHHhhCCcEEEeeCCCCCCCCCCC--CCCCCCCHHHHHHHHHHHHHHh------CCceEEEEEcCccHHHHHHHHHh
Q 021424 43 HQMVGVATAGFRAIAPDCRGYGLSDPP--AEPEKTSFQDMVDDLLAILDHL------GLAKVFLVAKDFGALTAYMFAIQ 114 (312)
Q Consensus 43 ~~~~~l~~~~~~vi~~Dl~G~G~S~~~--~~~~~~~~~~~a~di~~~~~~l------~~~~~~lvGhS~Gg~va~~~a~~ 114 (312)
.....|++.||.|+.+|.||.+..... .......-...++|+.+.++.+ +-+++.++|+|+||.+++.++..
T Consensus 5 ~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~ 84 (213)
T PF00326_consen 5 WNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQ 84 (213)
T ss_dssp HHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcc
Confidence 345677788999999999999854321 0001111123466666666665 34689999999999999999999
Q ss_pred cccccceeEEecCCCCCCCcchhhhccCcchhhhhcCCcchhhhhccCCcHHHHHHHHHHhhcCCCCCCCcchhhhhhhc
Q 021424 115 HQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRLDAKTVVRNIYILFSRSEIPIAPENKEIMDLV 194 (312)
Q Consensus 115 ~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (312)
+|++++++|..++.......... .. . .... . +..+..
T Consensus 85 ~~~~f~a~v~~~g~~d~~~~~~~----------~~-------------~-~~~~--~-~~~~~~---------------- 121 (213)
T PF00326_consen 85 HPDRFKAAVAGAGVSDLFSYYGT----------TD-------------I-YTKA--E-YLEYGD---------------- 121 (213)
T ss_dssp TCCGSSEEEEESE-SSTTCSBHH----------TC-------------C-HHHG--H-HHHHSS----------------
T ss_pred cceeeeeeeccceecchhccccc----------cc-------------c-cccc--c-ccccCc----------------
Confidence 99999999987654322110000 00 0 0000 0 000000
Q ss_pred CCCCCCCCCCCHHHHHHHHHhhccCCCCccccccccccccccCCCCcccccccEEEEeeCCCCCCCCCCchhhhhccchh
Q 021424 195 SDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLRENFSTPEVIAVKVPALLIMGDKDYFLKFPGIEDYIRSGKAK 274 (312)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~ 274 (312)
.+...+.+....... .. ... .+++|+|+++|++|..+|......+.. .++
T Consensus 122 -------~~~~~~~~~~~s~~~--------------~~------~~~-~~~~P~li~hG~~D~~Vp~~~s~~~~~--~L~ 171 (213)
T PF00326_consen 122 -------PWDNPEFYRELSPIS--------------PA------DNV-QIKPPVLIIHGENDPRVPPSQSLRLYN--ALR 171 (213)
T ss_dssp -------TTTSHHHHHHHHHGG--------------GG------GGC-GGGSEEEEEEETTBSSSTTHHHHHHHH--HHH
T ss_pred -------cchhhhhhhhhcccc--------------cc------ccc-cCCCCEEEEccCCCCccCHHHHHHHHH--HHH
Confidence 000111111110000 00 000 278999999999999998766666553 344
Q ss_pred ccCCCceEEEeCCCCCCCC-CcChHHHHHHHHHHhhhc
Q 021424 275 DLVPNLEIIHLPEGSHFVQ-EQSPEEVNQLILTFLNKH 311 (312)
Q Consensus 275 ~~~p~~~~~~~~~~GH~~~-~e~p~~~~~~i~~fl~~~ 311 (312)
+.-..+++.++|++||... .+......+.+.+|++++
T Consensus 172 ~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~ 209 (213)
T PF00326_consen 172 KAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKY 209 (213)
T ss_dssp HTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHH
T ss_pred hcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHH
Confidence 4434589999999999554 455678899999999874
No 78
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.60 E-value=6.2e-14 Score=116.65 Aligned_cols=264 Identities=17% Similarity=0.242 Sum_probs=137.9
Q ss_pred eeeeCCeEEEEEecCC-C--CceEEEECCCCCchhh-HHHHH-----HHHhhCCcEEEeeCCCCCCCCCCC--CCCCCCC
Q 021424 8 FIKVQGLNLHIAEAGA-D--AHVVVFLHGFPEIWYS-WRHQM-----VGVATAGFRAIAPDCRGYGLSDPP--AEPEKTS 76 (312)
Q Consensus 8 ~~~~~g~~i~~~~~g~-~--~~~vlllHG~~~~~~~-~~~~~-----~~l~~~~~~vi~~Dl~G~G~S~~~--~~~~~~~ 76 (312)
.++..-..+++...|. + +|++|=.|-.+-+..+ |..+. +.+. ++|-++-+|.|||..-... .+...-|
T Consensus 3 ~v~t~~G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~-~~f~i~Hi~aPGqe~ga~~~p~~y~yPs 81 (283)
T PF03096_consen 3 DVETPYGSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEIL-QNFCIYHIDAPGQEEGAATLPEGYQYPS 81 (283)
T ss_dssp EEEETTEEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHH-TTSEEEEEE-TTTSTT-----TT-----
T ss_pred eeccCceEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHh-hceEEEEEeCCCCCCCcccccccccccC
Confidence 3455444788877885 4 8999999988876665 54432 3444 4799999999999875443 2112459
Q ss_pred HHHHHHHHHHHHHHhCCceEEEEEcCccHHHHHHHHHhcccccceeEEecCCCCCCCcchhhhccCcchhhhhcCCcchh
Q 021424 77 FQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRA 156 (312)
Q Consensus 77 ~~~~a~di~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (312)
++++|+++.+++++++++.++-+|--.|++|-.++|..||++|.++|++++....++-..+. ......+.+..-+
T Consensus 82 md~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~---~~K~~~~~L~~~g-- 156 (283)
T PF03096_consen 82 MDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWF---YQKLSSWLLYSYG-- 156 (283)
T ss_dssp HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHH---HHHHH-------C--
T ss_pred HHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHH---HHHHhcccccccc--
Confidence 99999999999999999999999999999999999999999999999998765443321110 0000000000000
Q ss_pred hhhccCCcHHHHHHHHHHhhcCCCCCCCcc-hhhhhhhcCCCCCCCCCCCHHHHHHHHHhhccCCCCccccccccccccc
Q 021424 157 EADFGRLDAKTVVRNIYILFSRSEIPIAPE-NKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLREN 235 (312)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (312)
... ...+.+- ...|+........+ .+.....+. .......+..|..++... +.+.
T Consensus 157 ---mt~-~~~d~Ll--~h~Fg~~~~~~n~Dlv~~yr~~l~------~~~Np~Nl~~f~~sy~~R----------~DL~-- 212 (283)
T PF03096_consen 157 ---MTS-SVKDYLL--WHYFGKEEEENNSDLVQTYRQHLD------ERINPKNLALFLNSYNSR----------TDLS-- 212 (283)
T ss_dssp ---TTS--HHHHHH--HHHS-HHHHHCT-HHHHHHHHHHH------T-TTHHHHHHHHHHHHT-----------------
T ss_pred ---ccc-chHHhhh--hcccccccccccHHHHHHHHHHHh------cCCCHHHHHHHHHHHhcc----------ccch--
Confidence 000 0111111 11111100000000 000111111 112334555555554321 0100
Q ss_pred cCCCCcccccccEEEEeeCCCCCCCCCCchhhhhccchhccCCCceEEEeCCCCCCCCCcChHHHHHHHHHHhhh
Q 021424 236 FSTPEVIAVKVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLNK 310 (312)
Q Consensus 236 ~~~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~~ 310 (312)
.... ...||+|++.|+..+... .+.+.. .++. -..+++..+++||=.+..|+|+++++.++=||..
T Consensus 213 --~~~~-~~~c~vLlvvG~~Sp~~~--~vv~~n--s~Ld--p~~ttllkv~dcGglV~eEqP~klaea~~lFlQG 278 (283)
T PF03096_consen 213 --IERP-SLGCPVLLVVGDNSPHVD--DVVEMN--SKLD--PTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQG 278 (283)
T ss_dssp --SECT-TCCS-EEEEEETTSTTHH--HHHHHH--HHS---CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHH
T ss_pred --hhcC-CCCCCeEEEEecCCcchh--hHHHHH--hhcC--cccceEEEecccCCcccccCcHHHHHHHHHHHcc
Confidence 0011 456999999999998753 111111 1121 2347899999999999999999999999999863
No 79
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.60 E-value=1.5e-13 Score=111.61 Aligned_cols=108 Identities=14% Similarity=0.222 Sum_probs=74.4
Q ss_pred CCeEEEEEecCC--C-CceEEEECCCCCchhhHHHHHHHHhh-CCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 021424 12 QGLNLHIAEAGA--D-AHVVVFLHGFPEIWYSWRHQMVGVAT-AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAI 87 (312)
Q Consensus 12 ~g~~i~~~~~g~--~-~~~vlllHG~~~~~~~~~~~~~~l~~-~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~ 87 (312)
+|..+.....-+ . .++||+.||...+...-..+...|.. .+++++++|.+|+|.|...+ ... ...+|+.++
T Consensus 44 rgn~~~~~y~~~~~~~~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~p--sE~---n~y~Di~av 118 (258)
T KOG1552|consen 44 RGNEIVCMYVRPPEAAHPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKP--SER---NLYADIKAV 118 (258)
T ss_pred CCCEEEEEEEcCccccceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCc--ccc---cchhhHHHH
Confidence 455544333222 2 47999999996554432223333433 36899999999999997532 222 344555554
Q ss_pred HHHh---C--CceEEEEEcCccHHHHHHHHHhcccccceeEEec
Q 021424 88 LDHL---G--LAKVFLVAKDFGALTAYMFAIQHQERVSGVITLG 126 (312)
Q Consensus 88 ~~~l---~--~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~ 126 (312)
.+.| . .++++|.|+|+|...++.+|++.| ++++|+..
T Consensus 119 ye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~S 160 (258)
T KOG1552|consen 119 YEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHS 160 (258)
T ss_pred HHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEec
Confidence 4444 2 588999999999999999999999 99999875
No 80
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.57 E-value=5.9e-14 Score=113.18 Aligned_cols=224 Identities=18% Similarity=0.187 Sum_probs=136.0
Q ss_pred CCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-HhCCceEEEEEcC
Q 021424 24 DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILD-HLGLAKVFLVAKD 102 (312)
Q Consensus 24 ~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~-~l~~~~~~lvGhS 102 (312)
..+-|+++|=-++++..|+.-...|.. ...++++.+||+|.--. .+...+++.+|+.+..-+. -+.-.++.++|||
T Consensus 6 ~~~~L~cfP~AGGsa~~fr~W~~~lp~-~iel~avqlPGR~~r~~--ep~~~di~~Lad~la~el~~~~~d~P~alfGHS 82 (244)
T COG3208 6 ARLRLFCFPHAGGSASLFRSWSRRLPA-DIELLAVQLPGRGDRFG--EPLLTDIESLADELANELLPPLLDAPFALFGHS 82 (244)
T ss_pred CCceEEEecCCCCCHHHHHHHHhhCCc-hhheeeecCCCcccccC--CcccccHHHHHHHHHHHhccccCCCCeeecccc
Confidence 346789999777777777765556654 69999999999997643 3346799999999998888 3545679999999
Q ss_pred ccHHHHHHHHHhccc---ccceeEEecCCCCCCCcchhhhccCcchhhhhcCCcchhhhhccCCcHHHHHHHHHHhhcCC
Q 021424 103 FGALTAYMFAIQHQE---RVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRLDAKTVVRNIYILFSRS 179 (312)
Q Consensus 103 ~Gg~va~~~a~~~p~---~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (312)
|||.+|..+|.+... ...++.++++...... .. .. +...+.++.++.+... +..
T Consensus 83 mGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~--~~----------~~----------i~~~~D~~~l~~l~~l-gG~ 139 (244)
T COG3208 83 MGAMLAFEVARRLERAGLPPRALFISGCRAPHYD--RG----------KQ----------IHHLDDADFLADLVDL-GGT 139 (244)
T ss_pred hhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCc--cc----------CC----------ccCCCHHHHHHHHHHh-CCC
Confidence 999999999987533 2455655554321100 00 00 1111223333332211 111
Q ss_pred CCCCCcchhhhhhhcCCCCCCCCCCCHHHHHHHHHhhccCCCCccccccccccccccCCCCcccccccEEEEeeCCCCCC
Q 021424 180 EIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLRENFSTPEVIAVKVPALLIMGDKDYFL 259 (312)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~D~~~ 259 (312)
.- .-.++.+++.+ +.... +.++..... |+... .. .++||+.++.|++|..+
T Consensus 140 p~-e~led~El~~l------------------~LPil-RAD~~~~e~--Y~~~~------~~-pl~~pi~~~~G~~D~~v 190 (244)
T COG3208 140 PP-ELLEDPELMAL------------------FLPIL-RADFRALES--YRYPP------PA-PLACPIHAFGGEKDHEV 190 (244)
T ss_pred Ch-HHhcCHHHHHH------------------HHHHH-HHHHHHhcc--cccCC------CC-CcCcceEEeccCcchhc
Confidence 10 00011122211 11110 011100000 22211 12 68999999999999988
Q ss_pred CCCCchhhhhccchhccC-CCceEEEeCCCCCCCCCcChHHHHHHHHHHhh
Q 021424 260 KFPGIEDYIRSGKAKDLV-PNLEIIHLPEGSHFVQEQSPEEVNQLILTFLN 309 (312)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~ 309 (312)
+.+.+..+ ++.. ...++..++ +||+...++.+++.+.|.+.+.
T Consensus 191 s~~~~~~W------~~~t~~~f~l~~fd-GgHFfl~~~~~~v~~~i~~~l~ 234 (244)
T COG3208 191 SRDELGAW------REHTKGDFTLRVFD-GGHFFLNQQREEVLARLEQHLA 234 (244)
T ss_pred cHHHHHHH------HHhhcCCceEEEec-CcceehhhhHHHHHHHHHHHhh
Confidence 75433322 2232 368999998 6999999999999999999885
No 81
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.56 E-value=2.8e-14 Score=97.16 Aligned_cols=76 Identities=33% Similarity=0.423 Sum_probs=65.8
Q ss_pred CeEEEEEecCCC---CceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 021424 13 GLNLHIAEAGAD---AHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILD 89 (312)
Q Consensus 13 g~~i~~~~~g~~---~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~ 89 (312)
|.+|++..+-++ +.+|+++||+..++..|..+++.|.+.||.|+++|+||||+|+... ....+++++++|+..|++
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~r-g~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKR-GHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcc-cccCCHHHHHHHHHHHhC
Confidence 678999888762 4489999999999999999999999999999999999999998532 345689999999999874
No 82
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.55 E-value=6.1e-14 Score=110.06 Aligned_cols=118 Identities=19% Similarity=0.219 Sum_probs=85.6
Q ss_pred ccceeee---CCeEEEEEec--CCCCceEEEECCCCCchhhHHHHHH-HHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHH
Q 021424 5 EHKFIKV---QGLNLHIAEA--GADAHVVVFLHGFPEIWYSWRHQMV-GVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQ 78 (312)
Q Consensus 5 ~~~~~~~---~g~~i~~~~~--g~~~~~vlllHG~~~~~~~~~~~~~-~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~ 78 (312)
.+..+++ |.++++.... .++.|++|..||..++.......+. .+...+.+|+.++.||+|+|+..+ +-.
T Consensus 53 pye~i~l~T~D~vtL~a~~~~~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~Gsp-----sE~ 127 (300)
T KOG4391|consen 53 PYERIELRTRDKVTLDAYLMLSESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSP-----SEE 127 (300)
T ss_pred CceEEEEEcCcceeEeeeeecccCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCc-----ccc
Confidence 3444444 6667664322 2267999999999888776655443 344557899999999999998643 223
Q ss_pred HHHHHHHHHHHHh------CCceEEEEEcCccHHHHHHHHHhcccccceeEEecC
Q 021424 79 DMVDDLLAILDHL------GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGV 127 (312)
Q Consensus 79 ~~a~di~~~~~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~ 127 (312)
.+.-|-.+++++| .-.++++.|-|.||.+|..+|++..+|+.++|+-+.
T Consensus 128 GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENT 182 (300)
T KOG4391|consen 128 GLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENT 182 (300)
T ss_pred ceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeech
Confidence 3445555566665 455799999999999999999999999999997653
No 83
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.53 E-value=2.1e-12 Score=108.57 Aligned_cols=112 Identities=16% Similarity=0.223 Sum_probs=73.5
Q ss_pred CCeEEEEEecCC---CCceEEEECCCCCchhh-H-HHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 021424 12 QGLNLHIAEAGA---DAHVVVFLHGFPEIWYS-W-RHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLA 86 (312)
Q Consensus 12 ~g~~i~~~~~g~---~~~~vlllHG~~~~~~~-~-~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~ 86 (312)
+|.-...+..-+ .+|.||++||+.+++++ | +.+...+..+||.|++++.||||.+..... .-|+ ..+-+|+..
T Consensus 59 g~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p-~~yh-~G~t~D~~~ 136 (345)
T COG0429 59 GGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSP-RLYH-SGETEDIRF 136 (345)
T ss_pred CCEEEEeeccCccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCc-ceec-ccchhHHHH
Confidence 344444443322 56899999999765553 4 345677888999999999999999865321 2221 123366666
Q ss_pred HHHHh----CCceEEEEEcCccH-HHHHHHHHhccc-ccceeEEe
Q 021424 87 ILDHL----GLAKVFLVAKDFGA-LTAYMFAIQHQE-RVSGVITL 125 (312)
Q Consensus 87 ~~~~l----~~~~~~lvGhS~Gg-~va~~~a~~~p~-~v~~lv~~ 125 (312)
+++.+ .-.++..||.|+|| +++..++...-+ ++.+.+.+
T Consensus 137 ~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~v 181 (345)
T COG0429 137 FLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAV 181 (345)
T ss_pred HHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeee
Confidence 66665 45689999999999 666666655433 34444433
No 84
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.49 E-value=2.2e-13 Score=112.70 Aligned_cols=182 Identities=23% Similarity=0.277 Sum_probs=110.6
Q ss_pred CCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCC-CCCCCCCCCC--------CHHHHHHHHHHHHHHh---
Q 021424 24 DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGL-SDPPAEPEKT--------SFQDMVDDLLAILDHL--- 91 (312)
Q Consensus 24 ~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~-S~~~~~~~~~--------~~~~~a~di~~~~~~l--- 91 (312)
..|.||++|++.+-....+..++.|++.||.|++||+-+-.. .......... ..+...+|+.+.++.|
T Consensus 13 ~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~ 92 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQ 92 (218)
T ss_dssp SEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhc
Confidence 468999999998866666678899999999999999865444 1111110000 1234567776666665
Q ss_pred C---CceEEEEEcCccHHHHHHHHHhcccccceeEEecCCCCCCCcchhhhccCcchhhhhcCCcchhhhhccCCcHHHH
Q 021424 92 G---LAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRLDAKTV 168 (312)
Q Consensus 92 ~---~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (312)
. .+++.++|.||||.+++.+|... .++++.|..-+... .
T Consensus 93 ~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~----------------------~--------------- 134 (218)
T PF01738_consen 93 PEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSP----------------------P--------------- 134 (218)
T ss_dssp TTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSS----------------------G---------------
T ss_pred cccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCC----------------------C---------------
Confidence 2 35899999999999999999887 57888775421000 0
Q ss_pred HHHHHHhhcCCCCCCCcchhhhhhhcCCCCCCCCCCCHHHHHHHHHhhccCCCCccccccccccccccCCCCcccccccE
Q 021424 169 VRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLRENFSTPEVIAVKVPA 248 (312)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~ 248 (312)
. . ... ...++++|+
T Consensus 135 ----~------------~---------------------~~~-----------------------------~~~~~~~P~ 148 (218)
T PF01738_consen 135 ----P------------P---------------------PLE-----------------------------DAPKIKAPV 148 (218)
T ss_dssp ----G------------G---------------------HHH-----------------------------HGGG--S-E
T ss_pred ----C------------c---------------------chh-----------------------------hhcccCCCE
Confidence 0 0 000 000578999
Q ss_pred EEEeeCCCCCCCCCCchhhhhccchhccCCCceEEEeCCCCCCCCCcCh--------HHHHHHHHHHhhhc
Q 021424 249 LLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSP--------EEVNQLILTFLNKH 311 (312)
Q Consensus 249 l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~GH~~~~e~p--------~~~~~~i~~fl~~~ 311 (312)
+++.|++|+.++.+.+..+. +.+++.-..++++++++++|...-... ++-.+.+.+||+++
T Consensus 149 l~~~g~~D~~~~~~~~~~~~--~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 149 LILFGENDPFFPPEEVEALE--EALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp EEEEETT-TTS-HHHHHHHH--HHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred eecCccCCCCCChHHHHHHH--HHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 99999999998765444432 234444567899999999997655332 24447778888775
No 85
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.48 E-value=3.2e-12 Score=116.18 Aligned_cols=102 Identities=15% Similarity=0.121 Sum_probs=83.7
Q ss_pred CCceEEEECCCCCchhhHH-----HHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCc
Q 021424 24 DAHVVVFLHGFPEIWYSWR-----HQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL----GLA 94 (312)
Q Consensus 24 ~~~~vlllHG~~~~~~~~~-----~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l----~~~ 94 (312)
.++|||+|+.+-.-.+-|+ .+++.|.+.||+|+.+|+++-|.++ ...++++|++.+.+.++.. |.+
T Consensus 214 ~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~-----r~~~ldDYv~~i~~Ald~V~~~tG~~ 288 (560)
T TIGR01839 214 HARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH-----REWGLSTYVDALKEAVDAVRAITGSR 288 (560)
T ss_pred CCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhh-----cCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 3579999999876555553 5778899999999999999977653 4568888888777777765 678
Q ss_pred eEEEEEcCccHHHHHH----HHHhccc-ccceeEEecCCCC
Q 021424 95 KVFLVAKDFGALTAYM----FAIQHQE-RVSGVITLGVPIL 130 (312)
Q Consensus 95 ~~~lvGhS~Gg~va~~----~a~~~p~-~v~~lv~~~~~~~ 130 (312)
+++++|+|+||+++.. ||+++++ +|++++++.++..
T Consensus 289 ~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplD 329 (560)
T TIGR01839 289 DLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLD 329 (560)
T ss_pred CeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccc
Confidence 9999999999999997 8999996 8999999876543
No 86
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.47 E-value=7.1e-13 Score=109.09 Aligned_cols=105 Identities=13% Similarity=0.155 Sum_probs=72.3
Q ss_pred CCceEEEECCCCCchhhHH---HHHHHHhhCCcEEEeeCCCCCCCCCCC----CC----CCCCCHHHHHHHHHHHHHHhC
Q 021424 24 DAHVVVFLHGFPEIWYSWR---HQMVGVATAGFRAIAPDCRGYGLSDPP----AE----PEKTSFQDMVDDLLAILDHLG 92 (312)
Q Consensus 24 ~~~~vlllHG~~~~~~~~~---~~~~~l~~~~~~vi~~Dl~G~G~S~~~----~~----~~~~~~~~~a~di~~~~~~l~ 92 (312)
..|.||++||++++...|. .....+...+|.|++||.+|+|.+... .. .......++.+-+..+.+..+
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 91 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYS 91 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcC
Confidence 4689999999998877775 223333346899999999999865321 00 001122223333333333444
Q ss_pred C--ceEEEEEcCccHHHHHHHHHhcccccceeEEecCC
Q 021424 93 L--AKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 128 (312)
Q Consensus 93 ~--~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 128 (312)
+ ++++|+|||+||.+++.+|..+|+++.+++.++++
T Consensus 92 id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~ 129 (212)
T TIGR01840 92 IDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGL 129 (212)
T ss_pred cChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCC
Confidence 4 48999999999999999999999999998877643
No 87
>PRK10162 acetyl esterase; Provisional
Probab=99.46 E-value=1.9e-11 Score=106.81 Aligned_cols=102 Identities=17% Similarity=0.135 Sum_probs=70.6
Q ss_pred CCceEEEECCCC---CchhhHHHHHHHHhh-CCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC--ceEE
Q 021424 24 DAHVVVFLHGFP---EIWYSWRHQMVGVAT-AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGL--AKVF 97 (312)
Q Consensus 24 ~~~~vlllHG~~---~~~~~~~~~~~~l~~-~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~--~~~~ 97 (312)
..|+||++||.+ ++...|+.+...|+. .|+.|+++|+|.......+. ...+..+..+.+.+..+.+++ ++++
T Consensus 80 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~--~~~D~~~a~~~l~~~~~~~~~d~~~i~ 157 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQ--AIEEIVAVCCYFHQHAEDYGINMSRIG 157 (318)
T ss_pred CCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCC--cHHHHHHHHHHHHHhHHHhCCChhHEE
Confidence 458899999965 667778888877876 48999999999654332211 111222233444444556666 4799
Q ss_pred EEEcCccHHHHHHHHHhc------ccccceeEEecC
Q 021424 98 LVAKDFGALTAYMFAIQH------QERVSGVITLGV 127 (312)
Q Consensus 98 lvGhS~Gg~va~~~a~~~------p~~v~~lv~~~~ 127 (312)
++|+|+||.+++.++... +.++.+++++.+
T Consensus 158 l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p 193 (318)
T PRK10162 158 FAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYG 193 (318)
T ss_pred EEEECHHHHHHHHHHHHHHhcCCCccChhheEEECC
Confidence 999999999999998764 356788777653
No 88
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.46 E-value=2.2e-13 Score=127.53 Aligned_cols=114 Identities=15% Similarity=0.159 Sum_probs=88.2
Q ss_pred CCeEEEEEecCC----CCceEEEECCCCCchh---hHH-HHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHH
Q 021424 12 QGLNLHIAEAGA----DAHVVVFLHGFPEIWY---SWR-HQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDD 83 (312)
Q Consensus 12 ~g~~i~~~~~g~----~~~~vlllHG~~~~~~---~~~-~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~d 83 (312)
+|.+|++...-+ ..|+||++||++.+.. .+. .....|+++||.|+++|+||+|.|+... ..++ ...++|
T Consensus 5 DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~--~~~~-~~~~~D 81 (550)
T TIGR00976 5 DGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEF--DLLG-SDEAAD 81 (550)
T ss_pred CCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCce--EecC-cccchH
Confidence 788888654422 4578999999987653 222 2345677889999999999999998542 2233 567888
Q ss_pred HHHHHHHhCC-----ceEEEEEcCccHHHHHHHHHhcccccceeEEecCC
Q 021424 84 LLAILDHLGL-----AKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 128 (312)
Q Consensus 84 i~~~~~~l~~-----~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 128 (312)
+.++++.+.. .++.++||||||.+++.+|+.+|++++++|...+.
T Consensus 82 ~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~ 131 (550)
T TIGR00976 82 GYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGV 131 (550)
T ss_pred HHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcc
Confidence 8888888732 48999999999999999999999999999976543
No 89
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.46 E-value=6.4e-12 Score=109.34 Aligned_cols=92 Identities=23% Similarity=0.337 Sum_probs=69.8
Q ss_pred CCceEEEECCCCCchh-hH-HHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCceEE
Q 021424 24 DAHVVVFLHGFPEIWY-SW-RHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL----GLAKVF 97 (312)
Q Consensus 24 ~~~~vlllHG~~~~~~-~~-~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l----~~~~~~ 97 (312)
+.|.||++||..+++. .| +.++..+..+||+|+++..||+|.|.-.. +..|+. .+.+|+.++++++ ...+..
T Consensus 124 ~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtT-pr~f~a-g~t~Dl~~~v~~i~~~~P~a~l~ 201 (409)
T KOG1838|consen 124 TDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTT-PRLFTA-GWTEDLREVVNHIKKRYPQAPLF 201 (409)
T ss_pred CCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCC-Cceeec-CCHHHHHHHHHHHHHhCCCCceE
Confidence 4589999999976555 44 45556666789999999999999997543 344432 3567777777665 466899
Q ss_pred EEEcCccHHHHHHHHHhccc
Q 021424 98 LVAKDFGALTAYMFAIQHQE 117 (312)
Q Consensus 98 lvGhS~Gg~va~~~a~~~p~ 117 (312)
.||.||||.+...|.+.-.+
T Consensus 202 avG~S~Gg~iL~nYLGE~g~ 221 (409)
T KOG1838|consen 202 AVGFSMGGNILTNYLGEEGD 221 (409)
T ss_pred EEEecchHHHHHHHhhhccC
Confidence 99999999999999877544
No 90
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.46 E-value=1e-12 Score=108.43 Aligned_cols=182 Identities=24% Similarity=0.326 Sum_probs=106.4
Q ss_pred CCCceEEEECCCCCchhhHHHHHH-HHhhCCcEEEeeCCCC------CCC---CCCC-----CCC--CCCCHHHHHHHHH
Q 021424 23 ADAHVVVFLHGFPEIWYSWRHQMV-GVATAGFRAIAPDCRG------YGL---SDPP-----AEP--EKTSFQDMVDDLL 85 (312)
Q Consensus 23 ~~~~~vlllHG~~~~~~~~~~~~~-~l~~~~~~vi~~Dl~G------~G~---S~~~-----~~~--~~~~~~~~a~di~ 85 (312)
++.+.|||+||++++...|..... .+...+.+++++.-|- .|. +-.+ .+. ..-.+...++.+.
T Consensus 12 ~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l~ 91 (216)
T PF02230_consen 12 KAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERLD 91 (216)
T ss_dssp T-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHHH
T ss_pred CCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHHH
Confidence 367899999999999987765544 2233467888876542 343 2111 100 0113444455566
Q ss_pred HHHHHh-----CCceEEEEEcCccHHHHHHHHHhcccccceeEEecCCCCCCCcchhhhccCcchhhhhcCCcchhhhhc
Q 021424 86 AILDHL-----GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADF 160 (312)
Q Consensus 86 ~~~~~l-----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (312)
++++.+ .-++++|.|.|.||.+++.++.++|+++.++|.+++...... .
T Consensus 92 ~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~---------------~----------- 145 (216)
T PF02230_consen 92 ELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPES---------------E----------- 145 (216)
T ss_dssp HHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGC---------------C-----------
T ss_pred HHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccc---------------c-----------
Confidence 666653 345799999999999999999999999999998863211000 0
Q ss_pred cCCcHHHHHHHHHHhhcCCCCCCCcchhhhhhhcCCCCCCCCCCCHHHHHHHHHhhccCCCCccccccccccccccCCCC
Q 021424 161 GRLDAKTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLRENFSTPE 240 (312)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (312)
.. . . . ..
T Consensus 146 -----------------------------~~----~----------------------------------~-~-----~~ 152 (216)
T PF02230_consen 146 -----------------------------LE----D----------------------------------R-P-----EA 152 (216)
T ss_dssp -----------------------------CH----C----------------------------------C-H-----CC
T ss_pred -----------------------------cc----c----------------------------------c-c-----cc
Confidence 00 0 0 0 00
Q ss_pred cccccccEEEEeeCCCCCCCCCCchhhhhccchhccCCCceEEEeCCCCCCCCCcChHHHHHHHHHHhhhc
Q 021424 241 VIAVKVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLNKH 311 (312)
Q Consensus 241 ~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~~~ 311 (312)
.-++|+++++|++|+++|.+..+... +.+++...+++++.+++.||... .+..+.+.+||+++
T Consensus 153 --~~~~pi~~~hG~~D~vvp~~~~~~~~--~~L~~~~~~v~~~~~~g~gH~i~----~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 153 --LAKTPILIIHGDEDPVVPFEWAEKTA--EFLKAAGANVEFHEYPGGGHEIS----PEELRDLREFLEKH 215 (216)
T ss_dssp --CCTS-EEEEEETT-SSSTHHHHHHHH--HHHHCTT-GEEEEEETT-SSS------HHHHHHHHHHHHHH
T ss_pred --cCCCcEEEEecCCCCcccHHHHHHHH--HHHHhcCCCEEEEEcCCCCCCCC----HHHHHHHHHHHhhh
Confidence 12679999999999999865443332 34555556799999999999875 45556688888764
No 91
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.38 E-value=4.1e-11 Score=105.95 Aligned_cols=102 Identities=13% Similarity=0.153 Sum_probs=85.7
Q ss_pred ceEEEECCCCCchhhHH-HHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEcCcc
Q 021424 26 HVVVFLHGFPEIWYSWR-HQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFG 104 (312)
Q Consensus 26 ~~vlllHG~~~~~~~~~-~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~~~~lvGhS~G 104 (312)
||||++--+.++..... ..++.|++ |+.|+..|+.--+..+.. ...++++++++-+.++++++|-+ ++++|+++|
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~--~~~f~ldDYi~~l~~~i~~~G~~-v~l~GvCqg 178 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPLS--AGKFDLEDYIDYLIEFIRFLGPD-IHVIAVCQP 178 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchh--cCCCCHHHHHHHHHHHHHHhCCC-CcEEEEchh
Confidence 79999999988777664 57788888 999999999988865422 24679999999999999999887 999999999
Q ss_pred HHHHHHHHHhc-----ccccceeEEecCCCCC
Q 021424 105 ALTAYMFAIQH-----QERVSGVITLGVPILP 131 (312)
Q Consensus 105 g~va~~~a~~~-----p~~v~~lv~~~~~~~~ 131 (312)
|..++.+++.+ |.+++++|++++|...
T Consensus 179 G~~~laa~Al~a~~~~p~~~~sltlm~~PID~ 210 (406)
T TIGR01849 179 AVPVLAAVALMAENEPPAQPRSMTLMGGPIDA 210 (406)
T ss_pred hHHHHHHHHHHHhcCCCCCcceEEEEecCccC
Confidence 99988777666 6779999999877553
No 92
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.34 E-value=9.7e-11 Score=97.41 Aligned_cols=99 Identities=25% Similarity=0.299 Sum_probs=78.3
Q ss_pred ceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCC-CCCCCCCC-CC---C-----CCCHHHHHHHHHHHHHHhC---
Q 021424 26 HVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRG-YGLSDPPA-EP---E-----KTSFQDMVDDLLAILDHLG--- 92 (312)
Q Consensus 26 ~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G-~G~S~~~~-~~---~-----~~~~~~~a~di~~~~~~l~--- 92 (312)
|.||++|++.+-....+.....|+.+||-|++||+-+ .|.+.... .+ . ..+......|+.+.++.|.
T Consensus 28 P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~ 107 (236)
T COG0412 28 PGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQP 107 (236)
T ss_pred CEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCC
Confidence 8999999998877788899999999999999999987 34443322 11 0 1223677888888888873
Q ss_pred ---CceEEEEEcCccHHHHHHHHHhcccccceeEEe
Q 021424 93 ---LAKVFLVAKDFGALTAYMFAIQHQERVSGVITL 125 (312)
Q Consensus 93 ---~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~ 125 (312)
.+++.++|.||||.+++.+|...| ++++.|..
T Consensus 108 ~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~f 142 (236)
T COG0412 108 QVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAF 142 (236)
T ss_pred CCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEe
Confidence 457999999999999999999998 67777743
No 93
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.32 E-value=2e-11 Score=100.82 Aligned_cols=102 Identities=22% Similarity=0.234 Sum_probs=73.3
Q ss_pred CCceEEEECCCCCchhhHHHHHHHHh--------hCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHH----HHHHHHHHh
Q 021424 24 DAHVVVFLHGFPEIWYSWRHQMVGVA--------TAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVD----DLLAILDHL 91 (312)
Q Consensus 24 ~~~~vlllHG~~~~~~~~~~~~~~l~--------~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~----di~~~~~~l 91 (312)
+|.|||||||..++...|+.+...+. ...+++++.|+......-. ...+.+.++ .+..+++.+
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~-----g~~l~~q~~~~~~~i~~i~~~~ 77 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFH-----GRTLQRQAEFLAEAIKYILELY 77 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccc-----cccHHHHHHHHHHHHHHHHHhh
Confidence 57899999999999888877665552 1258899999887643221 223444444 444454545
Q ss_pred -----CCceEEEEEcCccHHHHHHHHHhcc---cccceeEEecCCCC
Q 021424 92 -----GLAKVFLVAKDFGALTAYMFAIQHQ---ERVSGVITLGVPIL 130 (312)
Q Consensus 92 -----~~~~~~lvGhS~Gg~va~~~a~~~p---~~v~~lv~~~~~~~ 130 (312)
+.++++||||||||.++..++...+ +.|+.+|.+++|..
T Consensus 78 ~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~ 124 (225)
T PF07819_consen 78 KSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHR 124 (225)
T ss_pred hhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCC
Confidence 5678999999999999998887654 57999999987754
No 94
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.30 E-value=3.4e-11 Score=94.91 Aligned_cols=88 Identities=25% Similarity=0.399 Sum_probs=61.6
Q ss_pred EEEECCCCCc-hhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEcCccHH
Q 021424 28 VVFLHGFPEI-WYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGAL 106 (312)
Q Consensus 28 vlllHG~~~~-~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~~~~lvGhS~Gg~ 106 (312)
|++|||+.++ ...|..-++.-.+..++|-.+|+ + ..+.+++.+.+.+-+..+. ++++|||||+||.
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~~~V~~~~~------~------~P~~~~W~~~l~~~i~~~~-~~~ilVaHSLGc~ 67 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENSVRVEQPDW------D------NPDLDEWVQALDQAIDAID-EPTILVAHSLGCL 67 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTSEEEEEC--------T------S--HHHHHHHHHHCCHC-T-TTEEEEEETHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCCeEEecccc------C------CCCHHHHHHHHHHHHhhcC-CCeEEEEeCHHHH
Confidence 6899999775 44687755554444478887777 2 1267788888887777664 4589999999999
Q ss_pred HHHHHH-HhcccccceeEEecCC
Q 021424 107 TAYMFA-IQHQERVSGVITLGVP 128 (312)
Q Consensus 107 va~~~a-~~~p~~v~~lv~~~~~ 128 (312)
.+++++ ...+.+|+++++++++
T Consensus 68 ~~l~~l~~~~~~~v~g~lLVAp~ 90 (171)
T PF06821_consen 68 TALRWLAEQSQKKVAGALLVAPF 90 (171)
T ss_dssp HHHHHHHHTCCSSEEEEEEES--
T ss_pred HHHHHHhhcccccccEEEEEcCC
Confidence 999999 7788899999999754
No 95
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=99.28 E-value=2.4e-11 Score=109.12 Aligned_cols=121 Identities=15% Similarity=0.265 Sum_probs=87.6
Q ss_pred ceeee-CCeEEEEEe--cCCCCceEEEE-CCC---CCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHH
Q 021424 7 KFIKV-QGLNLHIAE--AGADAHVVVFL-HGF---PEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQD 79 (312)
Q Consensus 7 ~~~~~-~g~~i~~~~--~g~~~~~vlll-HG~---~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~ 79 (312)
.+.+. +|+++.+.. .|.. .+-.+ ... ..+...|..+++.|.+.||.+ ..|++|+|++.+........+.+
T Consensus 71 ~~~~~~~gv~i~vp~~~~g~~--~i~~ldp~~~~~~~~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~~~~~~~~ 147 (440)
T PLN02733 71 KTVSLDPKTEIVVPDDRYGLY--AIDILDPDVIIRLDEVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNRLPETMDG 147 (440)
T ss_pred ceecCCCCceEEcCCCCCCce--eeEEecCccccCcchHHHHHHHHHHHHHcCCcc-CCCcccCCCCccccccHHHHHHH
Confidence 45566 588888764 2321 12221 111 355678999999999887654 89999999997653222234566
Q ss_pred HHHHHHHHHHHhCCceEEEEEcCccHHHHHHHHHhcccc----cceeEEecCCCC
Q 021424 80 MVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQER----VSGVITLGVPIL 130 (312)
Q Consensus 80 ~a~di~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~----v~~lv~~~~~~~ 130 (312)
+.+.+.++.+..+..+++||||||||.++..++..+|+. |+++|+++++..
T Consensus 148 Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I~la~P~~ 202 (440)
T PLN02733 148 LKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSDVFEKYVNSWIAIAAPFQ 202 (440)
T ss_pred HHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCHhHHhHhccEEEECCCCC
Confidence 777777777778889999999999999999999999874 688888877644
No 96
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.27 E-value=3.3e-10 Score=98.28 Aligned_cols=113 Identities=21% Similarity=0.157 Sum_probs=72.5
Q ss_pred CCeEEEEEec----CC-CCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCC-CCCCC----------------
Q 021424 12 QGLNLHIAEA----GA-DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYG-LSDPP---------------- 69 (312)
Q Consensus 12 ~g~~i~~~~~----g~-~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G-~S~~~---------------- 69 (312)
+|.+|+-.-. +. .-|.||..||.++....|...+ .++..||-|+++|.||+| .|...
T Consensus 65 ~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~-~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~ 143 (320)
T PF05448_consen 65 DGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLL-PWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGI 143 (320)
T ss_dssp GGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHH-HHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTT
T ss_pred CCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCccccc-ccccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCc
Confidence 6666664321 11 3378999999999888887654 456679999999999999 33211
Q ss_pred CC-CCCCCHHHHHHHHHHHHHHh------CCceEEEEEcCccHHHHHHHHHhcccccceeEEec
Q 021424 70 AE-PEKTSFQDMVDDLLAILDHL------GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLG 126 (312)
Q Consensus 70 ~~-~~~~~~~~~a~di~~~~~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~ 126 (312)
.+ ++.+-+..+..|+...++.+ +-+++.+.|.|.||.+++.+|+..| ||++++..-
T Consensus 144 ~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~v 206 (320)
T PF05448_consen 144 DDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADV 206 (320)
T ss_dssp TS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEES
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecC
Confidence 00 22344556667777766665 2357999999999999999999987 699888654
No 97
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.26 E-value=4.8e-11 Score=99.35 Aligned_cols=99 Identities=17% Similarity=0.196 Sum_probs=82.0
Q ss_pred ceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCc-eEEEEEcCcc
Q 021424 26 HVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLA-KVFLVAKDFG 104 (312)
Q Consensus 26 ~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~-~~~lvGhS~G 104 (312)
++|+|+||.+++...|..+++.|....+.|++++.+|.+.... ...+++++|++..+-|....-+ ++.|+|||+|
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~----~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~G 76 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDEP----PPDSIEELASRYAEAIRARQPEGPYVLAGWSFG 76 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSH----EESSHHHHHHHHHHHHHHHTSSSSEEEEEETHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCC----CCCCHHHHHHHHHHHhhhhCCCCCeeehccCcc
Confidence 4799999999999999998888754229999999999994332 3468999999999999887766 9999999999
Q ss_pred HHHHHHHHHhc---ccccceeEEecCC
Q 021424 105 ALTAYMFAIQH---QERVSGVITLGVP 128 (312)
Q Consensus 105 g~va~~~a~~~---p~~v~~lv~~~~~ 128 (312)
|.||..+|.+- -..+..++++|++
T Consensus 77 g~lA~E~A~~Le~~G~~v~~l~liD~~ 103 (229)
T PF00975_consen 77 GILAFEMARQLEEAGEEVSRLILIDSP 103 (229)
T ss_dssp HHHHHHHHHHHHHTT-SESEEEEESCS
T ss_pred HHHHHHHHHHHHHhhhccCceEEecCC
Confidence 99999999764 3458899999864
No 98
>COG0400 Predicted esterase [General function prediction only]
Probab=99.26 E-value=1.6e-10 Score=93.29 Aligned_cols=98 Identities=15% Similarity=0.221 Sum_probs=69.4
Q ss_pred CCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCC--------CCCCCCCH-------HHHHHHHHHHH
Q 021424 24 DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPP--------AEPEKTSF-------QDMVDDLLAIL 88 (312)
Q Consensus 24 ~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~--------~~~~~~~~-------~~~a~di~~~~ 88 (312)
..|.||++||++++..++-+....+.. +++++.+ | |.+... .+...++. ..+++.+....
T Consensus 17 ~~~~iilLHG~Ggde~~~~~~~~~~~P-~~~~is~--r--G~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~ 91 (207)
T COG0400 17 AAPLLILLHGLGGDELDLVPLPELILP-NATLVSP--R--GPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELA 91 (207)
T ss_pred CCcEEEEEecCCCChhhhhhhhhhcCC-CCeEEcC--C--CCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHH
Confidence 456899999999998888775555544 5776665 2 222211 01122333 34555556666
Q ss_pred HHhCC--ceEEEEEcCccHHHHHHHHHhcccccceeEEec
Q 021424 89 DHLGL--AKVFLVAKDFGALTAYMFAIQHQERVSGVITLG 126 (312)
Q Consensus 89 ~~l~~--~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~ 126 (312)
+++++ ++++++|.|=|+.+++.+..++|+.++++|+..
T Consensus 92 ~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~ 131 (207)
T COG0400 92 EEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFS 131 (207)
T ss_pred HHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcC
Confidence 66677 789999999999999999999999999988764
No 99
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.22 E-value=2.2e-09 Score=85.65 Aligned_cols=87 Identities=18% Similarity=0.316 Sum_probs=64.3
Q ss_pred EEEECCCCCchhhHHHH-H-HHHhhC--CcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEcCc
Q 021424 28 VVFLHGFPEIWYSWRHQ-M-VGVATA--GFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDF 103 (312)
Q Consensus 28 vlllHG~~~~~~~~~~~-~-~~l~~~--~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~~~~lvGhS~ 103 (312)
|+.||||.++..+.... + +.+.+. ..+++++|++ .......+.+.+++++..-+.+.|||.||
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~-------------~~p~~a~~~l~~~i~~~~~~~~~liGSSl 68 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP-------------PFPEEAIAQLEQLIEELKPENVVLIGSSL 68 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC-------------cCHHHHHHHHHHHHHhCCCCCeEEEEECh
Confidence 78999999988877642 2 233322 2456666655 24556678889999999888899999999
Q ss_pred cHHHHHHHHHhcccccceeEEecCCCC
Q 021424 104 GALTAYMFAIQHQERVSGVITLGVPIL 130 (312)
Q Consensus 104 Gg~va~~~a~~~p~~v~~lv~~~~~~~ 130 (312)
||+.|..+|.+++ +++ |+++++..
T Consensus 69 GG~~A~~La~~~~--~~a-vLiNPav~ 92 (187)
T PF05728_consen 69 GGFYATYLAERYG--LPA-VLINPAVR 92 (187)
T ss_pred HHHHHHHHHHHhC--CCE-EEEcCCCC
Confidence 9999999999995 444 66776543
No 100
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.21 E-value=7.4e-11 Score=121.70 Aligned_cols=99 Identities=14% Similarity=0.064 Sum_probs=86.5
Q ss_pred CCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCc-eEEEEEcC
Q 021424 24 DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLA-KVFLVAKD 102 (312)
Q Consensus 24 ~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~-~~~lvGhS 102 (312)
++++++|+||+++++..|..++..|.. +++|+++|++|+|.+. +..+++.++++++.+.++.+..+ +++++|||
T Consensus 1067 ~~~~l~~lh~~~g~~~~~~~l~~~l~~-~~~v~~~~~~g~~~~~----~~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S 1141 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAWQFSVLSRYLDP-QWSIYGIQSPRPDGPM----QTATSLDEVCEAHLATLLEQQPHGPYHLLGYS 1141 (1296)
T ss_pred CCCCeEEecCCCCchHHHHHHHHhcCC-CCcEEEEECCCCCCCC----CCCCCHHHHHHHHHHHHHhhCCCCCEEEEEec
Confidence 568999999999999999998887754 7999999999999663 23579999999999999987654 89999999
Q ss_pred ccHHHHHHHHHh---cccccceeEEecC
Q 021424 103 FGALTAYMFAIQ---HQERVSGVITLGV 127 (312)
Q Consensus 103 ~Gg~va~~~a~~---~p~~v~~lv~~~~ 127 (312)
|||.+|..+|.+ .|+++..++++++
T Consensus 1142 ~Gg~vA~e~A~~l~~~~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1142 LGGTLAQGIAARLRARGEEVAFLGLLDT 1169 (1296)
T ss_pred hhhHHHHHHHHHHHHcCCceeEEEEecC
Confidence 999999999986 5788999998875
No 101
>PRK10115 protease 2; Provisional
Probab=99.21 E-value=1.1e-09 Score=104.66 Aligned_cols=117 Identities=17% Similarity=0.154 Sum_probs=84.7
Q ss_pred eCCeEEEE-Eec------CCCCceEEEECCCCCchh--hHHHHHHHHhhCCcEEEeeCCCCCCCCCCC---C---CCCCC
Q 021424 11 VQGLNLHI-AEA------GADAHVVVFLHGFPEIWY--SWRHQMVGVATAGFRAIAPDCRGYGLSDPP---A---EPEKT 75 (312)
Q Consensus 11 ~~g~~i~~-~~~------g~~~~~vlllHG~~~~~~--~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~---~---~~~~~ 75 (312)
-||.+|.+ ..+ +.+.|.||++||.++.+. .|......|+++||-|+.++.||-|.=... . .....
T Consensus 424 ~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~ 503 (686)
T PRK10115 424 RDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKN 503 (686)
T ss_pred CCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCC
Confidence 38998775 221 114589999999887664 366666778899999999999997654321 0 11124
Q ss_pred CHHHHHHHHHHHHHHh--CCceEEEEEcCccHHHHHHHHHhcccccceeEEecC
Q 021424 76 SFQDMVDDLLAILDHL--GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGV 127 (312)
Q Consensus 76 ~~~~~a~di~~~~~~l--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~ 127 (312)
++.|+++.+..+++.- .-+++.+.|.|.||+++..++..+|++++++|...+
T Consensus 504 ~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp 557 (686)
T PRK10115 504 TFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVP 557 (686)
T ss_pred cHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCC
Confidence 6666666666665542 235799999999999999999999999999997643
No 102
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.19 E-value=3.7e-10 Score=95.80 Aligned_cols=104 Identities=20% Similarity=0.246 Sum_probs=88.8
Q ss_pred CceEEEECCCCCchhhHHHHHHHHhh---CCcEEEeeCCCCCCCCCCC----CCCCCCCHHHHHHHHHHHHHHhCC----
Q 021424 25 AHVVVFLHGFPEIWYSWRHQMVGVAT---AGFRAIAPDCRGYGLSDPP----AEPEKTSFQDMVDDLLAILDHLGL---- 93 (312)
Q Consensus 25 ~~~vlllHG~~~~~~~~~~~~~~l~~---~~~~vi~~Dl~G~G~S~~~----~~~~~~~~~~~a~di~~~~~~l~~---- 93 (312)
.+.++||.|.||-...|...+..|.+ ..+.|+++.+.||-.++.. .+...|+++++++-..++++++--
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 35799999999999999888877763 4799999999999988765 235689999999999999988643
Q ss_pred --ceEEEEEcCccHHHHHHHHHhcc---cccceeEEecCC
Q 021424 94 --AKVFLVAKDFGALTAYMFAIQHQ---ERVSGVITLGVP 128 (312)
Q Consensus 94 --~~~~lvGhS~Gg~va~~~a~~~p---~~v~~lv~~~~~ 128 (312)
.+++|+|||.|+++++++..+.| .+|.+++++-+.
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPT 121 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPT 121 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCc
Confidence 56999999999999999999999 789998887544
No 103
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.13 E-value=1.6e-09 Score=87.13 Aligned_cols=115 Identities=23% Similarity=0.311 Sum_probs=75.7
Q ss_pred ceeee-CCeEEEEEecCC------CCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCC-CCCCCCCCCCCCCHH
Q 021424 7 KFIKV-QGLNLHIAEAGA------DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGY-GLSDPPAEPEKTSFQ 78 (312)
Q Consensus 7 ~~~~~-~g~~i~~~~~g~------~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~-G~S~~~~~~~~~~~~ 78 (312)
+.+.+ +|.+|+.++.-| ..++||+..||+.....|..++.+|+..||+||.||-..| |.|+.. -..+++.
T Consensus 5 hvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~--I~eftms 82 (294)
T PF02273_consen 5 HVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGD--INEFTMS 82 (294)
T ss_dssp EEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B---------------HH
T ss_pred ceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCC--hhhcchH
Confidence 45555 889999988765 2478999999999999999999999999999999999877 788753 3578999
Q ss_pred HHHHHHHHHHHHh---CCceEEEEEcCccHHHHHHHHHhcccccceeEEe
Q 021424 79 DMVDDLLAILDHL---GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITL 125 (312)
Q Consensus 79 ~~a~di~~~~~~l---~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~ 125 (312)
...+++..+++.| |..++-||..|+-|.||+..|+.- .+.-+|..
T Consensus 83 ~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLita 130 (294)
T PF02273_consen 83 IGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITA 130 (294)
T ss_dssp HHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEE
T ss_pred HhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEE
Confidence 9999999888877 788999999999999999999944 35555544
No 104
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.12 E-value=6.3e-10 Score=92.09 Aligned_cols=111 Identities=28% Similarity=0.369 Sum_probs=78.7
Q ss_pred EEEEecCCCCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-Hh---
Q 021424 16 LHIAEAGADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILD-HL--- 91 (312)
Q Consensus 16 i~~~~~g~~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~-~l--- 91 (312)
++|-+...+-|+|||+||+......|..+++++++.||-||++|+...+..+. ..+.....+.++++.+=++ .|
T Consensus 8 v~~P~~~g~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~--~~~~~~~~~vi~Wl~~~L~~~l~~~ 85 (259)
T PF12740_consen 8 VYYPSSAGTYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDD--TDEVASAAEVIDWLAKGLESKLPLG 85 (259)
T ss_pred EEecCCCCCcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCc--chhHHHHHHHHHHHHhcchhhcccc
Confidence 44433221569999999999766667888999999999999999776554221 1112233344444333222 22
Q ss_pred ---CCceEEEEEcCccHHHHHHHHHhc-----ccccceeEEecCC
Q 021424 92 ---GLAKVFLVAKDFGALTAYMFAIQH-----QERVSGVITLGVP 128 (312)
Q Consensus 92 ---~~~~~~lvGhS~Gg~va~~~a~~~-----p~~v~~lv~~~~~ 128 (312)
+++++.|.|||.||-++..++..+ +.++++++++++.
T Consensus 86 v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPV 130 (259)
T PF12740_consen 86 VKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPV 130 (259)
T ss_pred ccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccc
Confidence 567899999999999999999998 6689999999864
No 105
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.11 E-value=4.9e-09 Score=78.79 Aligned_cols=104 Identities=19% Similarity=0.248 Sum_probs=79.3
Q ss_pred eEEEECCCCC--chhhHHHHHHHHhhCCcEEEeeCCC-----CCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEE
Q 021424 27 VVVFLHGFPE--IWYSWRHQMVGVATAGFRAIAPDCR-----GYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLV 99 (312)
Q Consensus 27 ~vlllHG~~~--~~~~~~~~~~~l~~~~~~vi~~Dl~-----G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~~~~lv 99 (312)
+||+-||-++ ++.....+...|...|+.|..+.++ =.| ..+|+.+...--..+...+.++.+.+.-.+.++=
T Consensus 16 tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg-~rkPp~~~~t~~~~~~~~~aql~~~l~~gpLi~G 94 (213)
T COG3571 16 TILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTG-RRKPPPGSGTLNPEYIVAIAQLRAGLAEGPLIIG 94 (213)
T ss_pred EEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhcccc-CCCCcCccccCCHHHHHHHHHHHhcccCCceeec
Confidence 7999998765 4555667778888889999999875 234 2233333444556688888899998888899999
Q ss_pred EcCccHHHHHHHHHhcccccceeEEecCCCCC
Q 021424 100 AKDFGALTAYMFAIQHQERVSGVITLGVPILP 131 (312)
Q Consensus 100 GhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~~ 131 (312)
|+||||.++.++|..-.-.|++|++++-|..+
T Consensus 95 GkSmGGR~aSmvade~~A~i~~L~clgYPfhp 126 (213)
T COG3571 95 GKSMGGRVASMVADELQAPIDGLVCLGYPFHP 126 (213)
T ss_pred cccccchHHHHHHHhhcCCcceEEEecCccCC
Confidence 99999999999997765569999999865443
No 106
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.11 E-value=6.8e-09 Score=80.63 Aligned_cols=89 Identities=22% Similarity=0.274 Sum_probs=59.6
Q ss_pred CCceEEEECCC------CCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CC-
Q 021424 24 DAHVVVFLHGF------PEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL---GL- 93 (312)
Q Consensus 24 ~~~~vlllHG~------~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l---~~- 93 (312)
+.|..|..|-- ..+.-.. .++..|.+.||.++.+|+||-|+|...- ++.+= -.+|..+.++.+ .-
T Consensus 27 ~~~iAli~HPHPl~gGtm~nkvv~-~la~~l~~~G~atlRfNfRgVG~S~G~f---D~GiG-E~~Da~aaldW~~~~hp~ 101 (210)
T COG2945 27 AAPIALICHPHPLFGGTMNNKVVQ-TLARALVKRGFATLRFNFRGVGRSQGEF---DNGIG-ELEDAAAALDWLQARHPD 101 (210)
T ss_pred CCceEEecCCCccccCccCCHHHH-HHHHHHHhCCceEEeecccccccccCcc---cCCcc-hHHHHHHHHHHHHhhCCC
Confidence 45677788843 2333322 3556677899999999999999997542 22221 234444545444 22
Q ss_pred c-eEEEEEcCccHHHHHHHHHhccc
Q 021424 94 A-KVFLVAKDFGALTAYMFAIQHQE 117 (312)
Q Consensus 94 ~-~~~lvGhS~Gg~va~~~a~~~p~ 117 (312)
. .+-+.|.|+|++|++.+|.+.|+
T Consensus 102 s~~~~l~GfSFGa~Ia~~la~r~~e 126 (210)
T COG2945 102 SASCWLAGFSFGAYIAMQLAMRRPE 126 (210)
T ss_pred chhhhhcccchHHHHHHHHHHhccc
Confidence 2 24588999999999999999986
No 107
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.10 E-value=6.2e-09 Score=87.01 Aligned_cols=107 Identities=18% Similarity=0.347 Sum_probs=71.4
Q ss_pred CCceEEEECCCCCchhhHHHHHHHHh-hCCc--EEEe--eCCCCC----CC--C--CCC------CCCCCCCHHHHHHHH
Q 021424 24 DAHVVVFLHGFPEIWYSWRHQMVGVA-TAGF--RAIA--PDCRGY----GL--S--DPP------AEPEKTSFQDMVDDL 84 (312)
Q Consensus 24 ~~~~vlllHG~~~~~~~~~~~~~~l~-~~~~--~vi~--~Dl~G~----G~--S--~~~------~~~~~~~~~~~a~di 84 (312)
+..|.|||||++++..++..++..+. ..+. .++. ++-=|+ |. . ..| .+..+-++..++..+
T Consensus 10 ~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl 89 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWL 89 (255)
T ss_dssp S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHH
Confidence 34689999999999999999999986 4332 2333 333332 21 1 111 111113688899999
Q ss_pred HHHHHHh----CCceEEEEEcCccHHHHHHHHHhccc-----ccceeEEecCCCC
Q 021424 85 LAILDHL----GLAKVFLVAKDFGALTAYMFAIQHQE-----RVSGVITLGVPIL 130 (312)
Q Consensus 85 ~~~~~~l----~~~~~~lvGhS~Gg~va~~~a~~~p~-----~v~~lv~~~~~~~ 130 (312)
..++.+| +++++-+|||||||.++..|+..+.. ++..+|.|++|+.
T Consensus 90 ~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfn 144 (255)
T PF06028_consen 90 KKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFN 144 (255)
T ss_dssp HHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TT
T ss_pred HHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccC
Confidence 9988887 79999999999999999999988633 5899999988755
No 108
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.07 E-value=3.4e-09 Score=86.53 Aligned_cols=113 Identities=19% Similarity=0.214 Sum_probs=82.2
Q ss_pred eCCeEEEEEecCC-----CCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCC----C-C---------
Q 021424 11 VQGLNLHIAEAGA-----DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPP----A-E--------- 71 (312)
Q Consensus 11 ~~g~~i~~~~~g~-----~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~----~-~--------- 71 (312)
.+|.+|+-+-.=+ .-|.||--||.+++...|..++ .+...||.|+.+|-||.|.|+.. + .
T Consensus 64 ~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l-~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtr 142 (321)
T COG3458 64 YGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDML-HWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTR 142 (321)
T ss_pred cCCceEEEEEEeecccCCccceEEEEeeccCCCCCccccc-cccccceeEEEEecccCCCccccCCCCCCCCcCCceeEe
Confidence 3777887653211 3478999999999888886554 45567999999999999988431 1 1
Q ss_pred -----CCCCCHHHHHHHHHHHHHHh------CCceEEEEEcCccHHHHHHHHHhcccccceeEEe
Q 021424 72 -----PEKTSFQDMVDDLLAILDHL------GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITL 125 (312)
Q Consensus 72 -----~~~~~~~~~a~di~~~~~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~ 125 (312)
++.|-+.....|+...++.+ .-+++.+.|.|.||.+++..|+..| |+++++..
T Consensus 143 GilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~ 206 (321)
T COG3458 143 GILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVAD 206 (321)
T ss_pred ecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhccccc
Confidence 12333445566666666665 3467999999999999999999887 78888743
No 109
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.03 E-value=1.4e-09 Score=91.81 Aligned_cols=107 Identities=14% Similarity=0.312 Sum_probs=65.7
Q ss_pred eEEEEEecCC-CCceEEEECCCCCchhh---HHHHHHHHhhCCcEEEeeCCC----CCCCCCCCCCCCCCCHHHHHHHHH
Q 021424 14 LNLHIAEAGA-DAHVVVFLHGFPEIWYS---WRHQMVGVATAGFRAIAPDCR----GYGLSDPPAEPEKTSFQDMVDDLL 85 (312)
Q Consensus 14 ~~i~~~~~g~-~~~~vlllHG~~~~~~~---~~~~~~~l~~~~~~vi~~Dl~----G~G~S~~~~~~~~~~~~~~a~di~ 85 (312)
..+.|...+. ....||||-|.++...+ ...+++.|.+.+|.|+-+-++ |+|. .++++=++||.
T Consensus 21 ~afe~~~~~~~~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~---------~SL~~D~~eI~ 91 (303)
T PF08538_consen 21 VAFEFTSSSSSAPNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGT---------SSLDRDVEEIA 91 (303)
T ss_dssp EEEEEEEE-TTSSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S-----------HHHHHHHHH
T ss_pred eEEEecCCCCCCCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCc---------chhhhHHHHHH
Confidence 3444544442 34589999998765443 345667776678999988765 3443 36667778887
Q ss_pred HHHHHh--------CCceEEEEEcCccHHHHHHHHHhcc-----cccceeEEecCCC
Q 021424 86 AILDHL--------GLAKVFLVAKDFGALTAYMFAIQHQ-----ERVSGVITLGVPI 129 (312)
Q Consensus 86 ~~~~~l--------~~~~~~lvGhS~Gg~va~~~a~~~p-----~~v~~lv~~~~~~ 129 (312)
+++++| +-++++|+|||-|+--+++|..... .+|++.|+-++..
T Consensus 92 ~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVS 148 (303)
T PF08538_consen 92 QLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVS 148 (303)
T ss_dssp HHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE--
T ss_pred HHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCC
Confidence 777765 3468999999999999999987752 5799999987653
No 110
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=98.96 E-value=2.4e-09 Score=94.10 Aligned_cols=103 Identities=20% Similarity=0.204 Sum_probs=66.4
Q ss_pred CceEEEECCCCCchh-hHHHHH-HHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC---CceEEEE
Q 021424 25 AHVVVFLHGFPEIWY-SWRHQM-VGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLG---LAKVFLV 99 (312)
Q Consensus 25 ~~~vlllHG~~~~~~-~~~~~~-~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~---~~~~~lv 99 (312)
+.|+|++-|..++.. ++...+ +.|.+.|+.++++|+||.|.|...+-..+++ .+-+.+...+.... -+++.++
T Consensus 189 p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~--~l~~aVLd~L~~~p~VD~~RV~~~ 266 (411)
T PF06500_consen 189 PYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDSS--RLHQAVLDYLASRPWVDHTRVGAW 266 (411)
T ss_dssp -EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-CC--HHHHHHHHHHHHSTTEEEEEEEEE
T ss_pred CCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCHH--HHHHHHHHHHhcCCccChhheEEE
Confidence 346777777666554 543343 4577899999999999999996532222232 34445555555543 4589999
Q ss_pred EcCccHHHHHHHHHhcccccceeEEecCCC
Q 021424 100 AKDFGALTAYMFAIQHQERVSGVITLGVPI 129 (312)
Q Consensus 100 GhS~Gg~va~~~a~~~p~~v~~lv~~~~~~ 129 (312)
|-|+||++|.++|..+++|++++|..+++.
T Consensus 267 G~SfGGy~AvRlA~le~~RlkavV~~Ga~v 296 (411)
T PF06500_consen 267 GFSFGGYYAVRLAALEDPRLKAVVALGAPV 296 (411)
T ss_dssp EETHHHHHHHHHHHHTTTT-SEEEEES---
T ss_pred EeccchHHHHHHHHhcccceeeEeeeCchH
Confidence 999999999999999999999999988653
No 111
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.95 E-value=3.5e-09 Score=91.96 Aligned_cols=105 Identities=10% Similarity=0.123 Sum_probs=82.2
Q ss_pred CceEEEECCCCCchhhHH-----HHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEE
Q 021424 25 AHVVVFLHGFPEIWYSWR-----HQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLV 99 (312)
Q Consensus 25 ~~~vlllHG~~~~~~~~~-----~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~~~~lv 99 (312)
++|||++|-+-...+-|+ ..+..|.+.|+.|+.+|+++=..+....+-++|-...+.+.+..+.+..|.+++.++
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~itg~~~Inli 186 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKDITGQKDINLI 186 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHHHhCcccccee
Confidence 579999999875555443 355677788999999999988777643322345445556777778888899999999
Q ss_pred EcCccHHHHHHHHHhcccc-cceeEEecCCC
Q 021424 100 AKDFGALTAYMFAIQHQER-VSGVITLGVPI 129 (312)
Q Consensus 100 GhS~Gg~va~~~a~~~p~~-v~~lv~~~~~~ 129 (312)
|++.||++...+++.+|.+ |++++++.++.
T Consensus 187 GyCvGGtl~~~ala~~~~k~I~S~T~lts~~ 217 (445)
T COG3243 187 GYCVGGTLLAAALALMAAKRIKSLTLLTSPV 217 (445)
T ss_pred eEecchHHHHHHHHhhhhcccccceeeecch
Confidence 9999999999999999988 99999886653
No 112
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.95 E-value=1.3e-08 Score=81.29 Aligned_cols=113 Identities=24% Similarity=0.303 Sum_probs=76.8
Q ss_pred CCeEEEEEecCC--CCc-eEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCC-CCCCCHHHHH-HHHHH
Q 021424 12 QGLNLHIAEAGA--DAH-VVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAE-PEKTSFQDMV-DDLLA 86 (312)
Q Consensus 12 ~g~~i~~~~~g~--~~~-~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~-~~~~~~~~~a-~di~~ 86 (312)
||+.+.....-. +.+ -|+.--+++.....|++++..+...||.|..+|+||.|.|+.... ...+.+.|++ .|+.+
T Consensus 14 DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~a 93 (281)
T COG4757 14 DGYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPA 93 (281)
T ss_pred CCccCccccccCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcchHH
Confidence 777765544432 222 344444555666678888888888999999999999999986532 2357777765 35666
Q ss_pred HHHHh----CCceEEEEEcCccHHHHHHHHHhcccccceeEEec
Q 021424 87 ILDHL----GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLG 126 (312)
Q Consensus 87 ~~~~l----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~ 126 (312)
.++.+ ..-+...||||+||-+...+.. +| ++.+....+
T Consensus 94 al~~~~~~~~~~P~y~vgHS~GGqa~gL~~~-~~-k~~a~~vfG 135 (281)
T COG4757 94 ALAALKKALPGHPLYFVGHSFGGQALGLLGQ-HP-KYAAFAVFG 135 (281)
T ss_pred HHHHHHhhCCCCceEEeeccccceeeccccc-Cc-ccceeeEec
Confidence 66555 4457889999999988776655 44 555554443
No 113
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.93 E-value=2.4e-09 Score=87.33 Aligned_cols=89 Identities=20% Similarity=0.201 Sum_probs=54.3
Q ss_pred ceEEEECCCCC-chhhHHHHHHHHhhCCcE---EEeeCCCCCCCCCCCCCCC--CCCHHHHHHHHHHHHHHhCCceEEEE
Q 021424 26 HVVVFLHGFPE-IWYSWRHQMVGVATAGFR---AIAPDCRGYGLSDPPAEPE--KTSFQDMVDDLLAILDHLGLAKVFLV 99 (312)
Q Consensus 26 ~~vlllHG~~~-~~~~~~~~~~~l~~~~~~---vi~~Dl~G~G~S~~~~~~~--~~~~~~~a~di~~~~~~l~~~~~~lv 99 (312)
.|||||||..+ ....|..+++.|.+.||. |+++++-....+....... --+..++++.|.+++++=|- ||.||
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIV 80 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIV 80 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEE
Confidence 48999999988 667899999999999998 8999984444322111000 01123455555566666688 99999
Q ss_pred EcCccHHHHHHHHHhc
Q 021424 100 AKDFGALTAYMFAIQH 115 (312)
Q Consensus 100 GhS~Gg~va~~~a~~~ 115 (312)
||||||.++-.+..-.
T Consensus 81 gHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 81 GHSMGGTIARYYIKGG 96 (219)
T ss_dssp EETCHHHHHHHHHHHC
T ss_pred EcCCcCHHHHHHHHHc
Confidence 9999999988887543
No 114
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.93 E-value=1.4e-08 Score=97.89 Aligned_cols=81 Identities=17% Similarity=0.130 Sum_probs=65.1
Q ss_pred HHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC--------------------CceEEEEEcCc
Q 021424 44 QMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLG--------------------LAKVFLVAKDF 103 (312)
Q Consensus 44 ~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~--------------------~~~~~lvGhS~ 103 (312)
..+.++.+||.|+..|.||+|.|+.... .+. ..-.+|..++|+.+. -.+|.++|.||
T Consensus 271 ~~~~~~~rGYaVV~~D~RGtg~SeG~~~--~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY 347 (767)
T PRK05371 271 LNDYFLPRGFAVVYVSGIGTRGSDGCPT--TGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSY 347 (767)
T ss_pred HHHHHHhCCeEEEEEcCCCCCCCCCcCc--cCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcH
Confidence 3457788999999999999999975321 222 446777777777775 35899999999
Q ss_pred cHHHHHHHHHhcccccceeEEecC
Q 021424 104 GALTAYMFAIQHQERVSGVITLGV 127 (312)
Q Consensus 104 Gg~va~~~a~~~p~~v~~lv~~~~ 127 (312)
||.+++.+|+..|..++++|..++
T Consensus 348 ~G~~~~~aAa~~pp~LkAIVp~a~ 371 (767)
T PRK05371 348 LGTLPNAVATTGVEGLETIIPEAA 371 (767)
T ss_pred HHHHHHHHHhhCCCcceEEEeeCC
Confidence 999999999999999999997653
No 115
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.90 E-value=1.9e-08 Score=83.83 Aligned_cols=100 Identities=16% Similarity=0.155 Sum_probs=83.5
Q ss_pred ceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-CceEEEEEcCcc
Q 021424 26 HVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLG-LAKVFLVAKDFG 104 (312)
Q Consensus 26 ~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~-~~~~~lvGhS~G 104 (312)
|||+++|+..++...|..+...|.. ...|+..+-||+|.-.. ..-+++++++...+-|.... -.+++|+|||+|
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~-~~~v~~l~a~g~~~~~~----~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~G 75 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGP-LLPVYGLQAPGYGAGEQ----PFASLDDMAAAYVAAIRRVQPEGPYVLLGWSLG 75 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhcc-CceeeccccCccccccc----ccCCHHHHHHHHHHHHHHhCCCCCEEEEeeccc
Confidence 6899999999999999988877765 59999999999996432 23489999999999888874 458999999999
Q ss_pred HHHHHHHHHhc---ccccceeEEecCCCC
Q 021424 105 ALTAYMFAIQH---QERVSGVITLGVPIL 130 (312)
Q Consensus 105 g~va~~~a~~~---p~~v~~lv~~~~~~~ 130 (312)
|.||+.+|.+- -+.|..++++|++..
T Consensus 76 G~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 76 GAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred cHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 99999999763 346899999997644
No 116
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.85 E-value=1.3e-08 Score=82.93 Aligned_cols=103 Identities=25% Similarity=0.360 Sum_probs=74.2
Q ss_pred CCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------CCceE
Q 021424 24 DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL-------GLAKV 96 (312)
Q Consensus 24 ~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l-------~~~~~ 96 (312)
.-|+|+|+|||.-....|..++.++++.||-|+++++-.- .......+--+....++++..-++.+ +++++
T Consensus 45 ~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~--~~p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~kl 122 (307)
T PF07224_consen 45 TYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTL--FPPDGQDEIKSAASVINWLPEGLQHVLPENVEANLSKL 122 (307)
T ss_pred CccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcc--cCCCchHHHHHHHHHHHHHHhhhhhhCCCCcccccceE
Confidence 3489999999998887888889999999999999999752 21111111123333444444444443 46799
Q ss_pred EEEEcCccHHHHHHHHHhcc-c-ccceeEEecCC
Q 021424 97 FLVAKDFGALTAYMFAIQHQ-E-RVSGVITLGVP 128 (312)
Q Consensus 97 ~lvGhS~Gg~va~~~a~~~p-~-~v~~lv~~~~~ 128 (312)
.++|||+||-.|..+|..+. + ++.+||-+|+.
T Consensus 123 al~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV 156 (307)
T PF07224_consen 123 ALSGHSRGGKTAFALALGYATSLKFSALIGIDPV 156 (307)
T ss_pred EEeecCCccHHHHHHHhcccccCchhheeccccc
Confidence 99999999999999999884 2 57888877753
No 117
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.85 E-value=1.2e-08 Score=90.69 Aligned_cols=103 Identities=25% Similarity=0.293 Sum_probs=60.9
Q ss_pred CceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCC------CCC----C-------C------CC---C--C-
Q 021424 25 AHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLS------DPP----A-------E------PE---K--T- 75 (312)
Q Consensus 25 ~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S------~~~----~-------~------~~---~--~- 75 (312)
=|+|||.||++++...|..+...|++.||=|+++|.|-.=-+ +.. . + .. . +
T Consensus 100 ~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (379)
T PF03403_consen 100 FPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEEFE 179 (379)
T ss_dssp EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGHHH
T ss_pred CCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhHHH
Confidence 489999999999999999999999999999999999943111 000 0 0 00 0 0
Q ss_pred ----CHHHHHHHHHHHHHHh--------------------------CCceEEEEEcCccHHHHHHHHHhcccccceeEEe
Q 021424 76 ----SFQDMVDDLLAILDHL--------------------------GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITL 125 (312)
Q Consensus 76 ----~~~~~a~di~~~~~~l--------------------------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~ 125 (312)
.++.-++++...++.| +.+++.++|||+||..+...+..- .++++.|++
T Consensus 180 ~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~L 258 (379)
T PF03403_consen 180 LRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGILL 258 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEEEe
Confidence 1111244444444433 256799999999999999877766 689999988
Q ss_pred cCC
Q 021424 126 GVP 128 (312)
Q Consensus 126 ~~~ 128 (312)
|+.
T Consensus 259 D~W 261 (379)
T PF03403_consen 259 DPW 261 (379)
T ss_dssp S--
T ss_pred CCc
Confidence 864
No 118
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.83 E-value=1.9e-07 Score=82.80 Aligned_cols=123 Identities=24% Similarity=0.330 Sum_probs=87.7
Q ss_pred eeeeCCeEEEEE--ecC-CCCceEEEECCCCCchhhHHHH------HHHHhhCCcEEEeeCCCCCCCCCCC----C--C-
Q 021424 8 FIKVQGLNLHIA--EAG-ADAHVVVFLHGFPEIWYSWRHQ------MVGVATAGFRAIAPDCRGYGLSDPP----A--E- 71 (312)
Q Consensus 8 ~~~~~g~~i~~~--~~g-~~~~~vlllHG~~~~~~~~~~~------~~~l~~~~~~vi~~Dl~G~G~S~~~----~--~- 71 (312)
..+.||+-+--. -.+ ...|||+|.||..+++..|-.. .-.|.+.||.|+.-..||--.|.+. + .
T Consensus 53 V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~ 132 (403)
T KOG2624|consen 53 VTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSSDK 132 (403)
T ss_pred EEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCCcCCc
Confidence 333478743322 222 2679999999999999999532 2346678999999999998888653 1 1
Q ss_pred -CCCCCHHHHH-HHHHHHHH----HhCCceEEEEEcCccHHHHHHHHHhccc---ccceeEEecCCCC
Q 021424 72 -PEKTSFQDMV-DDLLAILD----HLGLAKVFLVAKDFGALTAYMFAIQHQE---RVSGVITLGVPIL 130 (312)
Q Consensus 72 -~~~~~~~~~a-~di~~~~~----~l~~~~~~lvGhS~Gg~va~~~a~~~p~---~v~~lv~~~~~~~ 130 (312)
-.++++++++ -|+-+.++ .=+-++++.||||-|+.+...+.+..|+ +|+.+++++++..
T Consensus 133 ~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~ 200 (403)
T KOG2624|consen 133 EFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAF 200 (403)
T ss_pred ceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhh
Confidence 1245666643 24444444 4478899999999999999999999887 7999998887643
No 119
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.82 E-value=7.1e-07 Score=76.73 Aligned_cols=240 Identities=15% Similarity=0.168 Sum_probs=129.2
Q ss_pred CCceEEEECCCCCchhhHHH-H-HHHHhhCCcEEEeeCCCCCCCCCCCCCCC--CCCHHHH-------HHHHHH---HHH
Q 021424 24 DAHVVVFLHGFPEIWYSWRH-Q-MVGVATAGFRAIAPDCRGYGLSDPPAEPE--KTSFQDM-------VDDLLA---ILD 89 (312)
Q Consensus 24 ~~~~vlllHG~~~~~~~~~~-~-~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~--~~~~~~~-------a~di~~---~~~ 89 (312)
.+|.+|.|.|-+++....+. + +..|+++|+.-+.+..|=||.-.+..... -.+..++ +.+... .++
T Consensus 91 ~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl~ 170 (348)
T PF09752_consen 91 YRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWLE 170 (348)
T ss_pred CCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHHH
Confidence 46888899999997654433 3 56788889999999999999764332111 1222222 222222 333
Q ss_pred HhCCceEEEEEcCccHHHHHHHHHhcccccceeEEecCCCCCCCcchhhhccCcchhhhhcCCcchhhhhccCCcHHHHH
Q 021424 90 HLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRLDAKTVV 169 (312)
Q Consensus 90 ~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (312)
..|..++.+.|-||||..|...|+.+|..+..+-++++.... ..++ ++.+.. ...++.+.
T Consensus 171 ~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs-~vFt------~Gvls~-------------~i~W~~L~ 230 (348)
T PF09752_consen 171 REGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSAS-VVFT------EGVLSN-------------SINWDALE 230 (348)
T ss_pred hcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCC-cchh------hhhhhc-------------CCCHHHHH
Confidence 448889999999999999999999999987766665433211 0000 010000 00111111
Q ss_pred HHHHHh--hcCCCCCCCcchhhhhhhcCCCCCCCCCCCHHHHHHHHHhhccCCCCccccccccccccccCCCCccccccc
Q 021424 170 RNIYIL--FSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRTLRENFSTPEVIAVKVP 247 (312)
Q Consensus 170 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 247 (312)
.+ +.. +........... ....... ......+.+.+......++. +.. ..++.. + .-.-.
T Consensus 231 ~q-~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~Ea~~~m~~~md~----------~T~-l~nf~~--P-~dp~~ 291 (348)
T PF09752_consen 231 KQ-FEDTVYEEEISDIPAQN--KSLPLDS--MEERRRDREALRFMRGVMDS----------FTH-LTNFPV--P-VDPSA 291 (348)
T ss_pred HH-hcccchhhhhcccccCc--ccccchh--hccccchHHHHHHHHHHHHh----------hcc-ccccCC--C-CCCCc
Confidence 11 000 000000000000 0000000 00112223333222211111 000 011111 1 12345
Q ss_pred EEEEeeCCCCCCCCCCchhhhhccchhccCCCceEEEeCCCCCCC-CCcChHHHHHHHHHHhh
Q 021424 248 ALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFV-QEQSPEEVNQLILTFLN 309 (312)
Q Consensus 248 ~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~GH~~-~~e~p~~~~~~i~~fl~ 309 (312)
+.++.+++|..+|.+.+. .+.+..|++++..+++ ||.. ++-+.+.|.+.|.+-++
T Consensus 292 ii~V~A~~DaYVPr~~v~------~Lq~~WPGsEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 292 IIFVAAKNDAYVPRHGVL------SLQEIWPGSEVRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred EEEEEecCceEechhhcc------hHHHhCCCCeEEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 899999999999765443 5677899999999986 9965 66888999999988765
No 120
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.81 E-value=3.7e-09 Score=92.07 Aligned_cols=104 Identities=15% Similarity=0.221 Sum_probs=64.4
Q ss_pred CCceEEEECCCCCch--hhHHH-HHHHHhh---CCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------
Q 021424 24 DAHVVVFLHGFPEIW--YSWRH-QMVGVAT---AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL------ 91 (312)
Q Consensus 24 ~~~~vlllHG~~~~~--~~~~~-~~~~l~~---~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l------ 91 (312)
+.|+++++|||.++. ..|.. +...++. .++.||++|+...-...-. . ........++.+..+++.|
T Consensus 70 ~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~-~-a~~n~~~vg~~la~~l~~L~~~~g~ 147 (331)
T PF00151_consen 70 SKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYP-Q-AVANTRLVGRQLAKFLSFLINNFGV 147 (331)
T ss_dssp TSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HH-H-HHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhcccccc-c-hhhhHHHHHHHHHHHHHHHHhhcCC
Confidence 568999999998877 46754 4454544 4799999999633211000 0 0112333444455555443
Q ss_pred CCceEEEEEcCccHHHHHHHHHhccc--ccceeEEecCCC
Q 021424 92 GLAKVFLVAKDFGALTAYMFAIQHQE--RVSGVITLGVPI 129 (312)
Q Consensus 92 ~~~~~~lvGhS~Gg~va~~~a~~~p~--~v~~lv~~~~~~ 129 (312)
..+++||||||+||.||...+..... ++.+|+-+|++.
T Consensus 148 ~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAg 187 (331)
T PF00151_consen 148 PPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAG 187 (331)
T ss_dssp -GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-
T ss_pred ChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccc
Confidence 46789999999999999999988777 899999999763
No 121
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.79 E-value=4.2e-08 Score=89.62 Aligned_cols=122 Identities=16% Similarity=0.185 Sum_probs=82.9
Q ss_pred ceeeeC----CeEEEEEecC---C--CCceEEEECCCCCchhhHHHHHH-----------HH------hhCCcEEEeeCC
Q 021424 7 KFIKVQ----GLNLHIAEAG---A--DAHVVVFLHGFPEIWYSWRHQMV-----------GV------ATAGFRAIAPDC 60 (312)
Q Consensus 7 ~~~~~~----g~~i~~~~~g---~--~~~~vlllHG~~~~~~~~~~~~~-----------~l------~~~~~~vi~~Dl 60 (312)
.++.++ +.+++|.-.. . +.|.||+++|.|+++..+--+.+ .+ ..+..+++.+|.
T Consensus 50 Gy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDq 129 (462)
T PTZ00472 50 GYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQ 129 (462)
T ss_pred EEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCeEEEeC
Confidence 466664 4567775333 2 56899999999988765421110 01 113478999997
Q ss_pred C-CCCCCCCCCCCCCCCHHHHHHHHHHHHHH-------hCCceEEEEEcCccHHHHHHHHHhcc----------ccccee
Q 021424 61 R-GYGLSDPPAEPEKTSFQDMVDDLLAILDH-------LGLAKVFLVAKDFGALTAYMFAIQHQ----------ERVSGV 122 (312)
Q Consensus 61 ~-G~G~S~~~~~~~~~~~~~~a~di~~~~~~-------l~~~~~~lvGhS~Gg~va~~~a~~~p----------~~v~~l 122 (312)
| |+|.|.........+..+.++|+.++++. ++..+++|+||||||..+..+|..-- -.++++
T Consensus 130 P~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi 209 (462)
T PTZ00472 130 PAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGL 209 (462)
T ss_pred CCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEE
Confidence 5 99988653322345678899999999984 45689999999999999988886631 135777
Q ss_pred EEecCC
Q 021424 123 ITLGVP 128 (312)
Q Consensus 123 v~~~~~ 128 (312)
++.++.
T Consensus 210 ~IGNg~ 215 (462)
T PTZ00472 210 AVGNGL 215 (462)
T ss_pred EEeccc
Confidence 765543
No 122
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.78 E-value=3.5e-08 Score=84.89 Aligned_cols=96 Identities=24% Similarity=0.260 Sum_probs=68.7
Q ss_pred CceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCC--CCCCCCCCCC-CCCC---HHHHHHHHHHHHHH--------
Q 021424 25 AHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRG--YGLSDPPAEP-EKTS---FQDMVDDLLAILDH-------- 90 (312)
Q Consensus 25 ~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G--~G~S~~~~~~-~~~~---~~~~a~di~~~~~~-------- 90 (312)
-|.|++-||.+++...|...++.+.+.||-|.++|.+| .|.......+ ..|+ +.+-..|+..++++
T Consensus 71 ~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP 150 (365)
T COG4188 71 LPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTASP 150 (365)
T ss_pred CCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcCc
Confidence 37899999999999999999999999999999999999 4444332111 0011 22333444444333
Q ss_pred -----hCCceEEEEEcCccHHHHHHHHHhcccccc
Q 021424 91 -----LGLAKVFLVAKDFGALTAYMFAIQHQERVS 120 (312)
Q Consensus 91 -----l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~ 120 (312)
+...+|-++|||+||+.++..+....+-..
T Consensus 151 ~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~ 185 (365)
T COG4188 151 ALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEA 185 (365)
T ss_pred ccccccCccceEEEecccccHHHHHhccccccHHH
Confidence 345689999999999999999887766433
No 123
>PRK04940 hypothetical protein; Provisional
Probab=98.77 E-value=2.6e-07 Score=72.39 Aligned_cols=86 Identities=19% Similarity=0.263 Sum_probs=50.0
Q ss_pred EEEECCCCCchhh--HHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---C-CceEEEEEc
Q 021424 28 VVFLHGFPEIWYS--WRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL---G-LAKVFLVAK 101 (312)
Q Consensus 28 vlllHG~~~~~~~--~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l---~-~~~~~lvGh 101 (312)
||+||||.+|..+ .... .+. .+.+|.+=+-.| ......-++.+.+.++.+ + .+++.|||.
T Consensus 2 IlYlHGF~SS~~S~~~Ka~--~l~-----~~~p~~~~~~l~-------~~~P~~a~~~l~~~i~~~~~~~~~~~~~liGS 67 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVL--QLQ-----FIDPDVRLISYS-------TLHPKHDMQHLLKEVDKMLQLSDDERPLICGV 67 (180)
T ss_pred EEEeCCCCCCCCccHHHHH--hhe-----eeCCCCeEEECC-------CCCHHHHHHHHHHHHHHhhhccCCCCcEEEEe
Confidence 7899999998887 6432 221 113333222111 011222233344444331 1 257899999
Q ss_pred CccHHHHHHHHHhcccccceeEEecCCCC
Q 021424 102 DFGALTAYMFAIQHQERVSGVITLGVPIL 130 (312)
Q Consensus 102 S~Gg~va~~~a~~~p~~v~~lv~~~~~~~ 130 (312)
|+||+-|..+|.++. +++++ ++++..
T Consensus 68 SLGGyyA~~La~~~g--~~aVL-iNPAv~ 93 (180)
T PRK04940 68 GLGGYWAERIGFLCG--IRQVI-FNPNLF 93 (180)
T ss_pred ChHHHHHHHHHHHHC--CCEEE-ECCCCC
Confidence 999999999999985 55544 666543
No 124
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.73 E-value=2e-06 Score=67.67 Aligned_cols=94 Identities=23% Similarity=0.294 Sum_probs=71.1
Q ss_pred eEEEECCCCCchhhHH-HHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCceEEEEEc
Q 021424 27 VVVFLHGFPEIWYSWR-HQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL----GLAKVFLVAK 101 (312)
Q Consensus 27 ~vlllHG~~~~~~~~~-~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l----~~~~~~lvGh 101 (312)
.+||+-|=++-. .++ .+++.|.+.|+.|+.+|-+=|=-|.+ |.++.+.|+.++++.. +.+++.|||.
T Consensus 4 ~~v~~SGDgGw~-~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~r-------tP~~~a~Dl~~~i~~y~~~w~~~~vvLiGY 75 (192)
T PF06057_consen 4 LAVFFSGDGGWR-DLDKQIAEALAKQGVPVVGVDSLRYFWSER-------TPEQTAADLARIIRHYRARWGRKRVVLIGY 75 (192)
T ss_pred EEEEEeCCCCch-hhhHHHHHHHHHCCCeEEEechHHHHhhhC-------CHHHHHHHHHHHHHHHHHHhCCceEEEEee
Confidence 467777655533 333 47788999999999999887776643 4567788888777775 6889999999
Q ss_pred CccHHHHHHHHHhccc----ccceeEEecCC
Q 021424 102 DFGALTAYMFAIQHQE----RVSGVITLGVP 128 (312)
Q Consensus 102 S~Gg~va~~~a~~~p~----~v~~lv~~~~~ 128 (312)
|+|+-|.-....+-|. +|..++++++.
T Consensus 76 SFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~ 106 (192)
T PF06057_consen 76 SFGADVLPFIYNRLPAALRARVAQVVLLSPS 106 (192)
T ss_pred cCCchhHHHHHhhCCHHHHhheeEEEEeccC
Confidence 9999888888777665 67777777643
No 125
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.70 E-value=6e-07 Score=86.62 Aligned_cols=122 Identities=16% Similarity=0.200 Sum_probs=86.8
Q ss_pred ccceeeeCCeEEEEEecCC-------CCceEEEECCCCCc-------hhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCC-
Q 021424 5 EHKFIKVQGLNLHIAEAGA-------DAHVVVFLHGFPEI-------WYSWRHQMVGVATAGFRAIAPDCRGYGLSDPP- 69 (312)
Q Consensus 5 ~~~~~~~~g~~i~~~~~g~-------~~~~vlllHG~~~~-------~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~- 69 (312)
+...++++|...++...-| +-|.||.+||.|++ .-+|..+ .....|+-|+.+|-||-|...+.
T Consensus 499 ~~~~i~~~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~~~G~~~ 576 (755)
T KOG2100|consen 499 EFGKIEIDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSGGYGWDF 576 (755)
T ss_pred eeEEEEeccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcCCcchhH
Confidence 3455666999998875543 23788999999962 2245433 34567899999999999977543
Q ss_pred -----CCCCCCCHHHHHHHHHHHHHHhCC--ceEEEEEcCccHHHHHHHHHhccccccee-EEecCC
Q 021424 70 -----AEPEKTSFQDMVDDLLAILDHLGL--AKVFLVAKDFGALTAYMFAIQHQERVSGV-ITLGVP 128 (312)
Q Consensus 70 -----~~~~~~~~~~~a~di~~~~~~l~~--~~~~lvGhS~Gg~va~~~a~~~p~~v~~l-v~~~~~ 128 (312)
.+-....+.++..-+..+++..-+ +++.+.|+|+||++++.++...|+.+-+. +.+++.
T Consensus 577 ~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPV 643 (755)
T KOG2100|consen 577 RSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPV 643 (755)
T ss_pred HHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecce
Confidence 111235677777777777776644 46999999999999999999999665554 766543
No 126
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.69 E-value=1.9e-07 Score=76.09 Aligned_cols=94 Identities=17% Similarity=0.133 Sum_probs=70.9
Q ss_pred EECC--CCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-hCCceEEEEEcCccHH
Q 021424 30 FLHG--FPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDH-LGLAKVFLVAKDFGAL 106 (312)
Q Consensus 30 llHG--~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~-l~~~~~~lvGhS~Gg~ 106 (312)
++|+ .+++...|..+...|.. .++|+++|++|+|.++.. ..++..+++.+...+.. .+..+++++|||+||.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~-~~~v~~~~~~g~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~ 76 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRG-RRDVSALPLPGFGPGEPL----PASADALVEAQAEAVLRAAGGRPFVLVGHSSGGL 76 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCC-CccEEEecCCCCCCCCCC----CCCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHH
Confidence 3454 33677789888877764 689999999999977543 24677777766655444 4567899999999999
Q ss_pred HHHHHHHh---cccccceeEEecCC
Q 021424 107 TAYMFAIQ---HQERVSGVITLGVP 128 (312)
Q Consensus 107 va~~~a~~---~p~~v~~lv~~~~~ 128 (312)
++..+|.. .++++.++++++..
T Consensus 77 ~a~~~a~~l~~~~~~~~~l~~~~~~ 101 (212)
T smart00824 77 LAHAVAARLEARGIPPAAVVLLDTY 101 (212)
T ss_pred HHHHHHHHHHhCCCCCcEEEEEccC
Confidence 99999886 45678999888753
No 127
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.68 E-value=6.5e-08 Score=79.40 Aligned_cols=50 Identities=16% Similarity=0.278 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHh-CC--ceEEEEEcCccHHHHHHHHHhcccccceeEEecCCC
Q 021424 79 DMVDDLLAILDHL-GL--AKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPI 129 (312)
Q Consensus 79 ~~a~di~~~~~~l-~~--~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~ 129 (312)
++-++..++++.. .+ +++.|+|.|.||-+|+.+|+.+| .|+++|.+.++.
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~ 56 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSS 56 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--S
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCce
Confidence 3455666666665 33 58999999999999999999999 899999887653
No 128
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.67 E-value=1.5e-07 Score=78.26 Aligned_cols=103 Identities=21% Similarity=0.235 Sum_probs=65.4
Q ss_pred CCceEEEECCCCCchhhHHHHHHHHh-hCCc--EEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCceE
Q 021424 24 DAHVVVFLHGFPEIWYSWRHQMVGVA-TAGF--RAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL----GLAKV 96 (312)
Q Consensus 24 ~~~~vlllHG~~~~~~~~~~~~~~l~-~~~~--~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l----~~~~~ 96 (312)
++..+||||||..+...-...+.++. ..++ .+|.+.+|+.|.-..-.. +..+...-+..+.++++.| +..++
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~-d~~~a~~s~~~l~~~L~~L~~~~~~~~I 95 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFY-DRESARFSGPALARFLRDLARAPGIKRI 95 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhh-hhhhHHHHHHHHHHHHHHHHhccCCceE
Confidence 56799999999987654322222222 1223 799999999986321111 1123444455555666554 67799
Q ss_pred EEEEcCccHHHHHHHHHh----cc-----cccceeEEecC
Q 021424 97 FLVAKDFGALTAYMFAIQ----HQ-----ERVSGVITLGV 127 (312)
Q Consensus 97 ~lvGhS~Gg~va~~~a~~----~p-----~~v~~lv~~~~ 127 (312)
+|++||||+.+.+..... .+ .++..+|++++
T Consensus 96 ~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~Ap 135 (233)
T PF05990_consen 96 HILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAP 135 (233)
T ss_pred EEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECC
Confidence 999999999999877543 21 25677777754
No 129
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.65 E-value=1e-07 Score=78.49 Aligned_cols=86 Identities=16% Similarity=0.186 Sum_probs=51.4
Q ss_pred CceEEEECCCCCchhhHHHHHHHHhh--CCcEEEeeCCCCCCCCCCCCCCCCCCHHH----HHHHHHHHHHHhCCc--eE
Q 021424 25 AHVVVFLHGFPEIWYSWRHQMVGVAT--AGFRAIAPDCRGYGLSDPPAEPEKTSFQD----MVDDLLAILDHLGLA--KV 96 (312)
Q Consensus 25 ~~~vlllHG~~~~~~~~~~~~~~l~~--~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~----~a~di~~~~~~l~~~--~~ 96 (312)
...|||+||+.++..+|..+...+.. +++.--.+...++-...... ..+++. ++++|.+.++..... ++
T Consensus 4 ~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~T---~~gI~~~g~rL~~eI~~~~~~~~~~~~~I 80 (217)
T PF05057_consen 4 VHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFKT---FDGIDVCGERLAEEILEHIKDYESKIRKI 80 (217)
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhccccccccc---chhhHHHHHHHHHHHHHhccccccccccc
Confidence 35799999999999999866555544 12321122222322221111 123443 555555555555544 89
Q ss_pred EEEEcCccHHHHHHHHH
Q 021424 97 FLVAKDFGALTAYMFAI 113 (312)
Q Consensus 97 ~lvGhS~Gg~va~~~a~ 113 (312)
++|||||||.|+-.+..
T Consensus 81 sfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 81 SFIGHSLGGLIARYALG 97 (217)
T ss_pred eEEEecccHHHHHHHHH
Confidence 99999999999865544
No 130
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.64 E-value=2e-07 Score=80.93 Aligned_cols=101 Identities=21% Similarity=0.292 Sum_probs=61.1
Q ss_pred CceEEEECCCCCchhh--------------H----HHHHHHHhhCCcEEEeeCCCCCCCCCCCCC---CCCCCHHHHHH-
Q 021424 25 AHVVVFLHGFPEIWYS--------------W----RHQMVGVATAGFRAIAPDCRGYGLSDPPAE---PEKTSFQDMVD- 82 (312)
Q Consensus 25 ~~~vlllHG~~~~~~~--------------~----~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~---~~~~~~~~~a~- 82 (312)
-|+||++||-+++.+. | ......|+..||-|+++|.+|+|.....+. ...++.+.++.
T Consensus 115 ~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~ 194 (390)
T PF12715_consen 115 FPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARN 194 (390)
T ss_dssp EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHH
T ss_pred CCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHHH
Confidence 3789999997665432 1 124668888999999999999998765431 12333333322
Q ss_pred --------------HHHHHHHHh------CCceEEEEEcCccHHHHHHHHHhcccccceeEEec
Q 021424 83 --------------DLLAILDHL------GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLG 126 (312)
Q Consensus 83 --------------di~~~~~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~ 126 (312)
|....++.| +-+++..+|+||||..++.+|+.-+ ||++.|..+
T Consensus 195 ~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALDd-RIka~v~~~ 257 (390)
T PF12715_consen 195 LLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALDD-RIKATVANG 257 (390)
T ss_dssp HHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-T-T--EEEEES
T ss_pred HHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcch-hhHhHhhhh
Confidence 222344444 2357999999999999999999875 898888665
No 131
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.63 E-value=1.4e-06 Score=67.09 Aligned_cols=90 Identities=20% Similarity=0.264 Sum_probs=64.5
Q ss_pred ceEEEECCCCCc-hhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEcCcc
Q 021424 26 HVVVFLHGFPEI-WYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFG 104 (312)
Q Consensus 26 ~~vlllHG~~~~-~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~~~~lvGhS~G 104 (312)
+.+|.+||..+| ...|+...+.-+.. +-.+++ ++...-...+|++.+.+-+.+. -++++||+||+|
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~~---a~rveq---------~~w~~P~~~dWi~~l~~~v~a~-~~~~vlVAHSLG 69 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALPN---ARRVEQ---------DDWEAPVLDDWIARLEKEVNAA-EGPVVLVAHSLG 69 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCcc---chhccc---------CCCCCCCHHHHHHHHHHHHhcc-CCCeEEEEeccc
Confidence 568999999654 45788766543221 112221 1223346788888888877777 335999999999
Q ss_pred HHHHHHHHHhcccccceeEEecCC
Q 021424 105 ALTAYMFAIQHQERVSGVITLGVP 128 (312)
Q Consensus 105 g~va~~~a~~~p~~v~~lv~~~~~ 128 (312)
|..+..++......|+++.+++++
T Consensus 70 c~~v~h~~~~~~~~V~GalLVApp 93 (181)
T COG3545 70 CATVAHWAEHIQRQVAGALLVAPP 93 (181)
T ss_pred HHHHHHHHHhhhhccceEEEecCC
Confidence 999999999987799999999765
No 132
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.60 E-value=1.9e-07 Score=79.87 Aligned_cols=113 Identities=16% Similarity=0.208 Sum_probs=74.7
Q ss_pred CCeEEEEEec-----CC-CCceEEEECCCCCch-hhHHHH-H--------HHHhhCCcEEEeeCCCCCCCCCCCCCCCCC
Q 021424 12 QGLNLHIAEA-----GA-DAHVVVFLHGFPEIW-YSWRHQ-M--------VGVATAGFRAIAPDCRGYGLSDPPAEPEKT 75 (312)
Q Consensus 12 ~g~~i~~~~~-----g~-~~~~vlllHG~~~~~-~~~~~~-~--------~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~ 75 (312)
||++|....+ +. .-|+||..|+++.+. ...... . ..+.+.||-||..|.||.|.|+..-.. .
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~--~ 78 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDP--M 78 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-T--T
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCcccc--C
Confidence 5666665332 11 237888899988643 122211 0 127788999999999999999854221 1
Q ss_pred CHHHHHHHHHHHHHHh---CC--ceEEEEEcCccHHHHHHHHHhcccccceeEEecC
Q 021424 76 SFQDMVDDLLAILDHL---GL--AKVFLVAKDFGALTAYMFAIQHQERVSGVITLGV 127 (312)
Q Consensus 76 ~~~~~a~di~~~~~~l---~~--~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~ 127 (312)
...-++|..+.|+-+ .+ .+|-++|.|++|..++..|+..|..+++++...+
T Consensus 79 -~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~ 134 (272)
T PF02129_consen 79 -SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSG 134 (272)
T ss_dssp -SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE
T ss_pred -ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEeccc
Confidence 445677777777666 33 3799999999999999999988889999997654
No 133
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.57 E-value=5.9e-07 Score=71.72 Aligned_cols=114 Identities=19% Similarity=0.289 Sum_probs=69.5
Q ss_pred eeeeCCeEEEEEecCC--CCceEEEECCCCCchh-hHHHHHHHHhhCCcEEEeeCCCCCCCCCCCC-CC-------CCCC
Q 021424 8 FIKVQGLNLHIAEAGA--DAHVVVFLHGFPEIWY-SWRHQMVGVATAGFRAIAPDCRGYGLSDPPA-EP-------EKTS 76 (312)
Q Consensus 8 ~~~~~g~~i~~~~~g~--~~~~vlllHG~~~~~~-~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~-~~-------~~~~ 76 (312)
..++.|+.-+.. |+ ++..||.+--+.+... .=+..+..++..||.|+.||+.+ |.--.+. +. ...+
T Consensus 22 ~~~v~gldaYv~--gs~~~~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~-Gdp~~~~~~~~~~~~w~~~~~ 98 (242)
T KOG3043|consen 22 EEEVGGLDAYVV--GSTSSKKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFR-GDPWSPSLQKSERPEWMKGHS 98 (242)
T ss_pred eEeecCeeEEEe--cCCCCCeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhc-CCCCCCCCChhhhHHHHhcCC
Confidence 345566655543 43 3346777765443322 23456777878899999999873 4111111 00 1223
Q ss_pred HHHHHHHHHHHHHHh---C-CceEEEEEcCccHHHHHHHHHhcccccceeEEe
Q 021424 77 FQDMVDDLLAILDHL---G-LAKVFLVAKDFGALTAYMFAIQHQERVSGVITL 125 (312)
Q Consensus 77 ~~~~a~di~~~~~~l---~-~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~ 125 (312)
....-.++..+++.| | ..++-++|.-|||.++..+....| ++.+.++.
T Consensus 99 ~~~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~ 150 (242)
T KOG3043|consen 99 PPKIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSF 150 (242)
T ss_pred cccchhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccch-hheeeeEe
Confidence 344456666666666 4 557889999999999888877777 56666643
No 134
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.57 E-value=2.3e-07 Score=81.47 Aligned_cols=101 Identities=21% Similarity=0.244 Sum_probs=79.4
Q ss_pred ceEEEECCCCCchhhHHHHHHHHhhCCcE---EEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEcC
Q 021424 26 HVVVFLHGFPEIWYSWRHQMVGVATAGFR---AIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKD 102 (312)
Q Consensus 26 ~~vlllHG~~~~~~~~~~~~~~l~~~~~~---vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~~~~lvGhS 102 (312)
-|++++||+..+...|..+...+...++. ++++++++-..+ ....-.-..+-.-+.+++...+-.++.|+|||
T Consensus 60 ~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~----~~~~~~~~ql~~~V~~~l~~~ga~~v~LigHS 135 (336)
T COG1075 60 EPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGGDGT----YSLAVRGEQLFAYVDEVLAKTGAKKVNLIGHS 135 (336)
T ss_pred ceEEEEccCcCCcchhhhhhhhhcchHHHhcccccccccccCCC----ccccccHHHHHHHHHHHHhhcCCCceEEEeec
Confidence 48999999988888888776666666776 888888876221 11233455667777778888888999999999
Q ss_pred ccHHHHHHHHHhcc--cccceeEEecCCCC
Q 021424 103 FGALTAYMFAIQHQ--ERVSGVITLGVPIL 130 (312)
Q Consensus 103 ~Gg~va~~~a~~~p--~~v~~lv~~~~~~~ 130 (312)
|||.++..++...+ .+|++++.++.+-.
T Consensus 136 ~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 136 MGGLDSRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred ccchhhHHHHhhcCccceEEEEEEeccCCC
Confidence 99999999999988 89999999987643
No 135
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.56 E-value=2.8e-07 Score=75.66 Aligned_cols=91 Identities=18% Similarity=0.193 Sum_probs=50.9
Q ss_pred CCceEEEECCCCCchhhHHHHHHHHhh---C-CcEEEeeCCC-----CCCCCC------------------CCCCC---C
Q 021424 24 DAHVVVFLHGFPEIWYSWRHQMVGVAT---A-GFRAIAPDCR-----GYGLSD------------------PPAEP---E 73 (312)
Q Consensus 24 ~~~~vlllHG~~~~~~~~~~~~~~l~~---~-~~~vi~~Dl~-----G~G~S~------------------~~~~~---~ 73 (312)
.++.||||||++.|..-|+.+...|-. + ++.++.+|=| +-|-.+ +.... .
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 357899999999999999876655432 3 6888888754 111111 00000 1
Q ss_pred CCCHHHHHHHHHHHHHHhCCceEEEEEcCccHHHHHHHHHhc
Q 021424 74 KTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQH 115 (312)
Q Consensus 74 ~~~~~~~a~di~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~ 115 (312)
...+.+-.+.+.+++++.|- =.-++|.|-||.+|..+++..
T Consensus 83 ~~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~ 123 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQ 123 (212)
T ss_dssp G---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHH
Confidence 23567777788888887763 245899999999999998754
No 136
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.53 E-value=1.4e-06 Score=72.60 Aligned_cols=123 Identities=20% Similarity=0.187 Sum_probs=84.8
Q ss_pred cceeeeCCeEEEEEecCC-----CCceEEEECCCCCchhhHHHHH--HHHhh-CCcEEEeeCC-------CCCCCCCCCC
Q 021424 6 HKFIKVQGLNLHIAEAGA-----DAHVVVFLHGFPEIWYSWRHQM--VGVAT-AGFRAIAPDC-------RGYGLSDPPA 70 (312)
Q Consensus 6 ~~~~~~~g~~i~~~~~g~-----~~~~vlllHG~~~~~~~~~~~~--~~l~~-~~~~vi~~Dl-------~G~G~S~~~~ 70 (312)
...+.++|.+-.|+-+-+ +.|.||++||-.++..-.+... +.|++ ++|=|+.||- .|.|.+-.+.
T Consensus 37 ~~s~~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~ 116 (312)
T COG3509 37 VASFDVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPA 116 (312)
T ss_pred ccccccCCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcc
Confidence 345666888877765543 3468999999887666544322 33333 5799999852 2333442222
Q ss_pred C--CCCCCHHHHHHHHHHHHHHhCCc--eEEEEEcCccHHHHHHHHHhcccccceeEEecCC
Q 021424 71 E--PEKTSFQDMVDDLLAILDHLGLA--KVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 128 (312)
Q Consensus 71 ~--~~~~~~~~~a~di~~~~~~l~~~--~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 128 (312)
+ ........+++.+..++.+.+++ +|++.|.|-||..+..++..+|+.+.++-.+...
T Consensus 117 ~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~ 178 (312)
T COG3509 117 DRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGL 178 (312)
T ss_pred cccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeecc
Confidence 1 11234556677777778888888 7999999999999999999999999998877543
No 137
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.53 E-value=1.2e-06 Score=71.60 Aligned_cols=103 Identities=14% Similarity=0.158 Sum_probs=68.1
Q ss_pred CceEEEECCCCCchhhHHHH--HHHHhh-CCcEEEeeCCCCCC--CC--CCCC--CC-CCCCHHHHHHHHHHHHHHhCCc
Q 021424 25 AHVVVFLHGFPEIWYSWRHQ--MVGVAT-AGFRAIAPDCRGYG--LS--DPPA--EP-EKTSFQDMVDDLLAILDHLGLA 94 (312)
Q Consensus 25 ~~~vlllHG~~~~~~~~~~~--~~~l~~-~~~~vi~~Dl~G~G--~S--~~~~--~~-~~~~~~~~a~di~~~~~~l~~~ 94 (312)
.|.||++||.+++...+... +..|++ .||-|+.|+...-. .. .+.. .. .......+++-+..+.+..++|
T Consensus 16 ~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~iD 95 (220)
T PF10503_consen 16 VPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNID 95 (220)
T ss_pred CCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcccC
Confidence 47899999999998877542 234444 46888888854211 11 1000 00 1112233444445555666655
Q ss_pred --eEEEEEcCccHHHHHHHHHhcccccceeEEecC
Q 021424 95 --KVFLVAKDFGALTAYMFAIQHQERVSGVITLGV 127 (312)
Q Consensus 95 --~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~ 127 (312)
++++.|+|.||..+..++..+||++.++...+.
T Consensus 96 ~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG 130 (220)
T PF10503_consen 96 PSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSG 130 (220)
T ss_pred CCceeeEEECHHHHHHHHHHHhCCccceEEEeecc
Confidence 799999999999999999999999999887654
No 138
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.43 E-value=2.1e-06 Score=69.86 Aligned_cols=105 Identities=17% Similarity=0.165 Sum_probs=77.1
Q ss_pred ceEEEECCCCCchhhHHHHHHHHhhCC-----cEEEeeCCCCC----CCCCCC-CC--------CCCCCHHHHHHHHHHH
Q 021424 26 HVVVFLHGFPEIWYSWRHQMVGVATAG-----FRAIAPDCRGY----GLSDPP-AE--------PEKTSFQDMVDDLLAI 87 (312)
Q Consensus 26 ~~vlllHG~~~~~~~~~~~~~~l~~~~-----~~vi~~Dl~G~----G~S~~~-~~--------~~~~~~~~~a~di~~~ 87 (312)
-|.+||||++++..+...++.+|...+ -=++..|--|- |.=++. .. ....+..++...+..+
T Consensus 46 iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~ 125 (288)
T COG4814 46 IPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKA 125 (288)
T ss_pred cceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHH
Confidence 378999999999999999999987642 12566676661 111111 01 1234677788888888
Q ss_pred HHHh----CCceEEEEEcCccHHHHHHHHHhccc-----ccceeEEecCCCC
Q 021424 88 LDHL----GLAKVFLVAKDFGALTAYMFAIQHQE-----RVSGVITLGVPIL 130 (312)
Q Consensus 88 ~~~l----~~~~~~lvGhS~Gg~va~~~a~~~p~-----~v~~lv~~~~~~~ 130 (312)
++.| +++++-+|||||||.-...|+..+-+ .+..+|+++++..
T Consensus 126 msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 126 MSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 8877 68999999999999999999887643 4788999887654
No 139
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.41 E-value=4.9e-06 Score=65.98 Aligned_cols=96 Identities=17% Similarity=0.359 Sum_probs=70.4
Q ss_pred ceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCC-------------------CCCCCCCCCCCCCCCHHHHHHHHHH
Q 021424 26 HVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCR-------------------GYGLSDPPAEPEKTSFQDMVDDLLA 86 (312)
Q Consensus 26 ~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~-------------------G~G~S~~~~~~~~~~~~~~a~di~~ 86 (312)
-.||++||.+++...|..+++.|.-.+.+.|+|--| +.+.+.. + +.-++...++-+..
T Consensus 4 atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~--~-d~~~~~~aa~~i~~ 80 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAP--E-DEEGLHRAADNIAN 80 (206)
T ss_pred EEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccc--h-hhhHHHHHHHHHHH
Confidence 379999999999999988887776667788888333 2221111 1 22356667777777
Q ss_pred HHHHh---C--CceEEEEEcCccHHHHHHHHHhcccccceeEE
Q 021424 87 ILDHL---G--LAKVFLVAKDFGALTAYMFAIQHQERVSGVIT 124 (312)
Q Consensus 87 ~~~~l---~--~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~ 124 (312)
++++. | .+++.+-|.|+||.++++.+..+|..+.++.-
T Consensus 81 Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~ 123 (206)
T KOG2112|consen 81 LIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFA 123 (206)
T ss_pred HHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeec
Confidence 77775 3 45788999999999999999999877776663
No 140
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.41 E-value=1e-06 Score=72.25 Aligned_cols=91 Identities=23% Similarity=0.367 Sum_probs=58.8
Q ss_pred EEEECCCC---CchhhHHHHHHHHhh-CCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---------hCCc
Q 021424 28 VVFLHGFP---EIWYSWRHQMVGVAT-AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDH---------LGLA 94 (312)
Q Consensus 28 vlllHG~~---~~~~~~~~~~~~l~~-~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~---------l~~~ 94 (312)
||++||.+ ++..........++. .|+.|+.+|.|= + |. .++.+..+|+.+.++. .+.+
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl---~--p~----~~~p~~~~D~~~a~~~l~~~~~~~~~d~~ 71 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRL---A--PE----APFPAALEDVKAAYRWLLKNADKLGIDPE 71 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE------T--TT----SSTTHHHHHHHHHHHHHHHTHHHHTEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccc---c--cc----ccccccccccccceeeecccccccccccc
Confidence 78999864 444444445566664 799999999993 2 11 2334555555554444 3456
Q ss_pred eEEEEEcCccHHHHHHHHHhcccc----cceeEEecC
Q 021424 95 KVFLVAKDFGALTAYMFAIQHQER----VSGVITLGV 127 (312)
Q Consensus 95 ~~~lvGhS~Gg~va~~~a~~~p~~----v~~lv~~~~ 127 (312)
+++++|+|-||.+++.++....+. +++++++.+
T Consensus 72 ~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p 108 (211)
T PF07859_consen 72 RIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISP 108 (211)
T ss_dssp EEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESC
T ss_pred ceEEeecccccchhhhhhhhhhhhcccchhhhhcccc
Confidence 899999999999999999876554 788887765
No 141
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.38 E-value=9.7e-05 Score=64.35 Aligned_cols=99 Identities=19% Similarity=0.186 Sum_probs=67.0
Q ss_pred CceEEEECCCC---C--chhhHHHHHHHHh-hCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH------hC
Q 021424 25 AHVVVFLHGFP---E--IWYSWRHQMVGVA-TAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDH------LG 92 (312)
Q Consensus 25 ~~~vlllHG~~---~--~~~~~~~~~~~l~-~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~------l~ 92 (312)
-|.||++||.+ + .+..|+.+...++ ..+.-|+++|+|=-=.. +-+-.++|-.+.+.-+.+. .+
T Consensus 90 ~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh-----~~Pa~y~D~~~Al~w~~~~~~~~~~~D 164 (336)
T KOG1515|consen 90 LPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEH-----PFPAAYDDGWAALKWVLKNSWLKLGAD 164 (336)
T ss_pred ceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCC-----CCCccchHHHHHHHHHHHhHHHHhCCC
Confidence 47899999865 2 3556666655553 34678999999832222 2233455655556666554 25
Q ss_pred CceEEEEEcCccHHHHHHHHHhc------ccccceeEEecCC
Q 021424 93 LAKVFLVAKDFGALTAYMFAIQH------QERVSGVITLGVP 128 (312)
Q Consensus 93 ~~~~~lvGhS~Gg~va~~~a~~~------p~~v~~lv~~~~~ 128 (312)
.+++.|+|-|-||.+|..+|.+. +-++++.|++-+.
T Consensus 165 ~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~ 206 (336)
T KOG1515|consen 165 PSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPF 206 (336)
T ss_pred cccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecc
Confidence 67899999999999999887653 3478888887543
No 142
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.37 E-value=1.2e-05 Score=65.30 Aligned_cols=124 Identities=19% Similarity=0.196 Sum_probs=91.9
Q ss_pred cccceeeeCCeEEEEEecCC-------CCceEEEECCCCCchhhHHHHHHHHhhC---CcEEEeeCCCCCCCCCC-----
Q 021424 4 IEHKFIKVQGLNLHIAEAGA-------DAHVVVFLHGFPEIWYSWRHQMVGVATA---GFRAIAPDCRGYGLSDP----- 68 (312)
Q Consensus 4 ~~~~~~~~~g~~i~~~~~g~-------~~~~vlllHG~~~~~~~~~~~~~~l~~~---~~~vi~~Dl~G~G~S~~----- 68 (312)
|+.++++.+|..++....|+ +.+.+++|.|.||....|.+++.+|..+ .+.++.+-..||-.-..
T Consensus 1 m~e~~~~~~gl~~si~~~~~~v~~~~~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~ 80 (301)
T KOG3975|consen 1 MTEKEYTKSGLPTSILTLKPWVTKSGEDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLRED 80 (301)
T ss_pred CcceeeeecCCcccceeeeeeeccCCCCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccc
Confidence 35567777777766554442 4678999999999999988887766542 36699999999875431
Q ss_pred C--CCCCCCCHHHHHHHHHHHHHHh--CCceEEEEEcCccHHHHHHHHHhc-cc-ccceeEEecC
Q 021424 69 P--AEPEKTSFQDMVDDLLAILDHL--GLAKVFLVAKDFGALTAYMFAIQH-QE-RVSGVITLGV 127 (312)
Q Consensus 69 ~--~~~~~~~~~~~a~di~~~~~~l--~~~~~~lvGhS~Gg~va~~~a~~~-p~-~v~~lv~~~~ 127 (312)
+ ...+-++++++++--.+|+++. ...+++++|||-|++..+.+.... ++ .|.+.+++-+
T Consensus 81 ~s~~~~eifsL~~QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFP 145 (301)
T KOG3975|consen 81 HSHTNEEIFSLQDQVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFP 145 (301)
T ss_pred cccccccccchhhHHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecc
Confidence 1 2235689999999999999987 355899999999999999988743 22 5777776643
No 143
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.34 E-value=6.3e-06 Score=64.96 Aligned_cols=102 Identities=17% Similarity=0.186 Sum_probs=64.0
Q ss_pred EEecCC--CCceEEEECCCC---CchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH----
Q 021424 18 IAEAGA--DAHVVVFLHGFP---EIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAIL---- 88 (312)
Q Consensus 18 ~~~~g~--~~~~vlllHG~~---~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~---- 88 (312)
...+|+ +.+..+||||.- ++...=...+-.+...||+|..+ |||.+.. ..++.+...++..++
T Consensus 58 VDIwg~~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasv---gY~l~~q-----~htL~qt~~~~~~gv~fil 129 (270)
T KOG4627|consen 58 VDIWGSTNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASV---GYNLCPQ-----VHTLEQTMTQFTHGVNFIL 129 (270)
T ss_pred EEEecCCCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEe---ccCcCcc-----cccHHHHHHHHHHHHHHHH
Confidence 345564 567899999953 22222222344455679999987 5777742 235555555555544
Q ss_pred HHhC-CceEEEEEcCccHHHHHHHHHh-cccccceeEEecC
Q 021424 89 DHLG-LAKVFLVAKDFGALTAYMFAIQ-HQERVSGVITLGV 127 (312)
Q Consensus 89 ~~l~-~~~~~lvGhS~Gg~va~~~a~~-~p~~v~~lv~~~~ 127 (312)
+... .+++.+-|||-|+.++.....+ +..||.++++.++
T Consensus 130 k~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~G 170 (270)
T KOG4627|consen 130 KYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCG 170 (270)
T ss_pred HhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhh
Confidence 4444 3445666999999998877655 4458888887654
No 144
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.33 E-value=0.00018 Score=62.73 Aligned_cols=99 Identities=18% Similarity=0.176 Sum_probs=63.1
Q ss_pred CCceEEEECCCC---CchhhH-HHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hC--Cc
Q 021424 24 DAHVVVFLHGFP---EIWYSW-RHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDH---LG--LA 94 (312)
Q Consensus 24 ~~~~vlllHG~~---~~~~~~-~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~---l~--~~ 94 (312)
..|+||++||.+ ++..+. ......+...|+.|+.+|+|=--.... ...+.+..+-+..+.+. ++ -+
T Consensus 78 ~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~-----p~~~~d~~~a~~~l~~~~~~~g~dp~ 152 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHPF-----PAALEDAYAAYRWLRANAAELGIDPS 152 (312)
T ss_pred CCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCCC-----CchHHHHHHHHHHHHhhhHhhCCCcc
Confidence 368999999864 444444 334444555799999999995443322 22344433333333323 34 46
Q ss_pred eEEEEEcCccHHHHHHHHHhcccc----cceeEEecC
Q 021424 95 KVFLVAKDFGALTAYMFAIQHQER----VSGVITLGV 127 (312)
Q Consensus 95 ~~~lvGhS~Gg~va~~~a~~~p~~----v~~lv~~~~ 127 (312)
++.+.|+|-||.++..++..-.++ ..+.+++.+
T Consensus 153 ~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P 189 (312)
T COG0657 153 RIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISP 189 (312)
T ss_pred ceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEec
Confidence 799999999999999999876553 455555543
No 145
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.33 E-value=1.2e-05 Score=68.57 Aligned_cols=104 Identities=17% Similarity=0.193 Sum_probs=72.9
Q ss_pred eeeeCCeEEEEEecCC----CCceEEEECCCCCchhhH------HHHHHHHh-hCCcEEEeeCCCCCCCCCCCCCCCCCC
Q 021424 8 FIKVQGLNLHIAEAGA----DAHVVVFLHGFPEIWYSW------RHQMVGVA-TAGFRAIAPDCRGYGLSDPPAEPEKTS 76 (312)
Q Consensus 8 ~~~~~g~~i~~~~~g~----~~~~vlllHG~~~~~~~~------~~~~~~l~-~~~~~vi~~Dl~G~G~S~~~~~~~~~~ 76 (312)
.++.|++.|-.....- ....||+.-|.++.-+.. +..+..++ ..+-+|+.+.+||.|.|.... +
T Consensus 116 ~Iq~D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~-----s 190 (365)
T PF05677_consen 116 PIQYDGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP-----S 190 (365)
T ss_pred EEeeCCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC-----C
Confidence 4555787766554431 456899999987655541 11222222 347899999999999996432 4
Q ss_pred HHHHHHHHHHHHHHhC-------CceEEEEEcCccHHHHHHHHHhcc
Q 021424 77 FQDMVDDLLAILDHLG-------LAKVFLVAKDFGALTAYMFAIQHQ 116 (312)
Q Consensus 77 ~~~~a~di~~~~~~l~-------~~~~~lvGhS~Gg~va~~~a~~~p 116 (312)
..+++.|-.+.++.|. -+++.+-|||+||.|+......+.
T Consensus 191 ~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 191 RKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred HHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcc
Confidence 6888888888888873 257999999999999988555553
No 146
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.26 E-value=1.7e-06 Score=73.04 Aligned_cols=105 Identities=11% Similarity=0.127 Sum_probs=65.3
Q ss_pred CCceEEEECCCCCchhhHH--HHHHHHhhCC----cEEEeeCCCCCCCC--CCC--------CCCCC--CC-HHHHHHHH
Q 021424 24 DAHVVVFLHGFPEIWYSWR--HQMVGVATAG----FRAIAPDCRGYGLS--DPP--------AEPEK--TS-FQDMVDDL 84 (312)
Q Consensus 24 ~~~~vlllHG~~~~~~~~~--~~~~~l~~~~----~~vi~~Dl~G~G~S--~~~--------~~~~~--~~-~~~~a~di 84 (312)
.-|+|+++||.......+. ..++.+..++ .-+|+++.-+.+.- ++. ..... .. ...+.++|
T Consensus 23 ~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~el 102 (251)
T PF00756_consen 23 PYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETFLTEEL 102 (251)
T ss_dssp TEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHTHH
T ss_pred CCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCcccceehhccc
Confidence 3478999999733333332 2333344432 34677777666611 111 00011 11 23456677
Q ss_pred HHHHHHh-CCce--EEEEEcCccHHHHHHHHHhcccccceeEEecCC
Q 021424 85 LAILDHL-GLAK--VFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 128 (312)
Q Consensus 85 ~~~~~~l-~~~~--~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 128 (312)
..+++.. .+.+ ..+.|+||||..|+.+|.+||+.+.+++.+++.
T Consensus 103 ~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~ 149 (251)
T PF00756_consen 103 IPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGA 149 (251)
T ss_dssp HHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEE
T ss_pred hhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcc
Confidence 7777664 3332 689999999999999999999999999988643
No 147
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.22 E-value=8.1e-05 Score=66.94 Aligned_cols=77 Identities=19% Similarity=0.273 Sum_probs=59.4
Q ss_pred HHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----CCceEEEEEcCccHHHHHHHHHhccccc
Q 021424 45 MVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL-----GLAKVFLVAKDFGALTAYMFAIQHQERV 119 (312)
Q Consensus 45 ~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l-----~~~~~~lvGhS~Gg~va~~~a~~~p~~v 119 (312)
-..|. .|+.|+.+... +.+....|+.+.+....+|+++. +..|+.+||.--||+.++.+|+.+|+++
T Consensus 94 G~AL~-~GHPvYFV~F~-------p~P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~ 165 (581)
T PF11339_consen 94 GVALR-AGHPVYFVGFF-------PEPEPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLV 165 (581)
T ss_pred HHHHH-cCCCeEEEEec-------CCCCCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCcc
Confidence 34554 47888877543 11123568998888888888875 2348999999999999999999999999
Q ss_pred ceeEEecCCC
Q 021424 120 SGVITLGVPI 129 (312)
Q Consensus 120 ~~lv~~~~~~ 129 (312)
..+|+.|+|.
T Consensus 166 gplvlaGaPl 175 (581)
T PF11339_consen 166 GPLVLAGAPL 175 (581)
T ss_pred CceeecCCCc
Confidence 9999888764
No 148
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.18 E-value=1.5e-05 Score=71.96 Aligned_cols=102 Identities=16% Similarity=0.219 Sum_probs=65.1
Q ss_pred CceEEEECCCC--CchhhHHHHHHHHhhCC----cEEEeeCCCCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHh-----C
Q 021424 25 AHVVVFLHGFP--EIWYSWRHQMVGVATAG----FRAIAPDCRGY-GLSDPPAEPEKTSFQDMVDDLLAILDHL-----G 92 (312)
Q Consensus 25 ~~~vlllHG~~--~~~~~~~~~~~~l~~~~----~~vi~~Dl~G~-G~S~~~~~~~~~~~~~~a~di~~~~~~l-----~ 92 (312)
-|+|+|+||-. .....+ ..++.|...| .-++.+|-.+- .++.... ....-...+++++.-++++. +
T Consensus 209 ~PvlyllDG~~w~~~~~~~-~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~-~~~~f~~~l~~eLlP~I~~~y~~~~d 286 (411)
T PRK10439 209 RPLAILLDGQFWAESMPVW-PALDSLTHRGQLPPAVYLLIDAIDTTHRSQELP-CNADFWLAVQQELLPQVRAIAPFSDD 286 (411)
T ss_pred CCEEEEEECHHhhhcCCHH-HHHHHHHHcCCCCceEEEEECCCCcccccccCC-chHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 47899999953 222222 3455555544 34688886321 1111111 11112344567777777764 3
Q ss_pred CceEEEEEcCccHHHHHHHHHhcccccceeEEecCC
Q 021424 93 LAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 128 (312)
Q Consensus 93 ~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 128 (312)
-++..|.|+||||..|+.++.++|+++.+++.+++.
T Consensus 287 ~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 287 ADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGS 322 (411)
T ss_pred ccceEEEEEChHHHHHHHHHHhCcccccEEEEeccc
Confidence 356889999999999999999999999999988643
No 149
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.18 E-value=5.4e-05 Score=60.65 Aligned_cols=58 Identities=19% Similarity=0.357 Sum_probs=41.4
Q ss_pred cccccEEEEeeCCCCCCCCCCchhhhhccchhccCCCceEEEeCCCCCCCCCcChHHHHHHHHHHhh
Q 021424 243 AVKVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLN 309 (312)
Q Consensus 243 ~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~ 309 (312)
.+++|+|-|.|+.|.+++... +..+...+++. .++...+||+++-.. .+.+.|.+||.
T Consensus 161 ~i~~PSLHi~G~~D~iv~~~~------s~~L~~~~~~a-~vl~HpggH~VP~~~--~~~~~i~~fi~ 218 (230)
T KOG2551|consen 161 PLSTPSLHIFGETDTIVPSER------SEQLAESFKDA-TVLEHPGGHIVPNKA--KYKEKIADFIQ 218 (230)
T ss_pred CCCCCeeEEecccceeecchH------HHHHHHhcCCC-eEEecCCCccCCCch--HHHHHHHHHHH
Confidence 689999999999999986532 33455667887 455566899988765 44555555554
No 150
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.15 E-value=2.6e-05 Score=64.99 Aligned_cols=111 Identities=14% Similarity=0.186 Sum_probs=73.0
Q ss_pred CCeEEEEEecCC-------CC-ceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCC---C----CCC----CCCC
Q 021424 12 QGLNLHIAEAGA-------DA-HVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYG---L----SDP----PAEP 72 (312)
Q Consensus 12 ~g~~i~~~~~g~-------~~-~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G---~----S~~----~~~~ 72 (312)
-|.++-|+-+=+ +- |-|||+||.+..+.+-+. .+++ +...|+++.|-.+ . +.- ...+
T Consensus 170 tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~---~l~s-g~gaiawa~pedqcfVlAPQy~~if~d~e~~t 245 (387)
T COG4099 170 TGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDK---VLSS-GIGAIAWAGPEDQCFVLAPQYNPIFADSEEKT 245 (387)
T ss_pred cCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhh---hhhc-CccceeeecccCceEEEccccccccccccccc
Confidence 456677764332 22 889999999876665443 3444 5777888888777 1 110 0111
Q ss_pred CCCCHHHHHHHHH-HHHHHhCCc--eEEEEEcCccHHHHHHHHHhcccccceeEEecC
Q 021424 73 EKTSFQDMVDDLL-AILDHLGLA--KVFLVAKDFGALTAYMFAIQHQERVSGVITLGV 127 (312)
Q Consensus 73 ~~~~~~~~a~di~-~~~~~l~~~--~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~ 127 (312)
..+ .....+.+. .+.++.+++ ++.++|.|+||.-++.++.++||.+++.+.+++
T Consensus 246 ~~~-l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG 302 (387)
T COG4099 246 LLY-LIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAG 302 (387)
T ss_pred chh-HHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecC
Confidence 111 223344444 345555665 699999999999999999999999999998753
No 151
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.15 E-value=1.5e-05 Score=68.58 Aligned_cols=71 Identities=24% Similarity=0.276 Sum_probs=46.4
Q ss_pred HHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC---ceEEEEEcCccHHHHHHHHHh
Q 021424 44 QMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGL---AKVFLVAKDFGALTAYMFAIQ 114 (312)
Q Consensus 44 ~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~---~~~~lvGhS~Gg~va~~~a~~ 114 (312)
.+..++..||-|+++|..|-|..-.......+..-|.+.-..++...+++ .++.+.|||-||.-+...|..
T Consensus 18 ~l~~~L~~GyaVv~pDY~Glg~~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l 91 (290)
T PF03583_consen 18 FLAAWLARGYAVVAPDYEGLGTPYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAEL 91 (290)
T ss_pred HHHHHHHCCCEEEecCCCCCCCcccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHH
Confidence 45667788999999999999983211111233444444444444443443 479999999999988766544
No 152
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=98.12 E-value=4.4e-06 Score=60.57 Aligned_cols=45 Identities=20% Similarity=0.521 Sum_probs=30.5
Q ss_pred CCccccceeeeCCeEEEEEecCC---CCceEEEECCCCCchhhHHHHH
Q 021424 1 MDQIEHKFIKVQGLNLHIAEAGA---DAHVVVFLHGFPEIWYSWRHQM 45 (312)
Q Consensus 1 ~~~~~~~~~~~~g~~i~~~~~g~---~~~~vlllHG~~~~~~~~~~~~ 45 (312)
+|++.+..++++|..||+....+ +..||||+||||+|...|.+++
T Consensus 65 lN~~phf~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf~Ef~~vI 112 (112)
T PF06441_consen 65 LNSFPHFKTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLEFLKVI 112 (112)
T ss_dssp HTTS-EEEEEETTEEEEEEEE--S-TT-EEEEEE--SS--GGGGHHHH
T ss_pred HHcCCCeeEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccHHhHHhhC
Confidence 35677888999999999976543 5569999999999999887653
No 153
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.08 E-value=1.3e-05 Score=73.29 Aligned_cols=113 Identities=18% Similarity=0.166 Sum_probs=81.5
Q ss_pred CCeEEEEEecCC-------CCceEEEECCCCC-----chhhHHHH--HHHHhhCCcEEEeeCCCCCCCCCCC------CC
Q 021424 12 QGLNLHIAEAGA-------DAHVVVFLHGFPE-----IWYSWRHQ--MVGVATAGFRAIAPDCRGYGLSDPP------AE 71 (312)
Q Consensus 12 ~g~~i~~~~~g~-------~~~~vlllHG~~~-----~~~~~~~~--~~~l~~~~~~vi~~Dl~G~G~S~~~------~~ 71 (312)
.|..++.....+ +-|+|++|=|.|+ +...|... ...|++.||-|+++|-||--..... ..
T Consensus 622 tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~k 701 (867)
T KOG2281|consen 622 TGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKK 701 (867)
T ss_pred CCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhc
Confidence 455555454443 3478999999884 22222222 2357778999999999997765432 11
Q ss_pred CCCCCHHHHHHHHHHHHHHhC---CceEEEEEcCccHHHHHHHHHhcccccceeEE
Q 021424 72 PEKTSFQDMVDDLLAILDHLG---LAKVFLVAKDFGALTAYMFAIQHQERVSGVIT 124 (312)
Q Consensus 72 ~~~~~~~~~a~di~~~~~~l~---~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~ 124 (312)
...-.++|+++-+.-+.++.| .++|.+-|||+||+++++..+++|+-++..|.
T Consensus 702 mGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIA 757 (867)
T KOG2281|consen 702 MGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIA 757 (867)
T ss_pred cCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEec
Confidence 223467889999999999875 68899999999999999999999997776663
No 154
>COG3150 Predicted esterase [General function prediction only]
Probab=98.07 E-value=1.6e-05 Score=60.57 Aligned_cols=86 Identities=21% Similarity=0.306 Sum_probs=67.2
Q ss_pred EEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEcCccHHH
Q 021424 28 VVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALT 107 (312)
Q Consensus 28 vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~~~~lvGhS~Gg~v 107 (312)
||.||||-+|..+...++ +. ..+..|.|-.+.|-.. -..++++.++.+..++.+++-+...|||-|+||+.
T Consensus 2 ilYlHGFnSSP~shka~l--~~----q~~~~~~~~i~y~~p~---l~h~p~~a~~ele~~i~~~~~~~p~ivGssLGGY~ 72 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVL--LL----QFIDEDVRDIEYSTPH---LPHDPQQALKELEKAVQELGDESPLIVGSSLGGYY 72 (191)
T ss_pred eEEEecCCCCcccHHHHH--HH----HHHhccccceeeecCC---CCCCHHHHHHHHHHHHHHcCCCCceEEeecchHHH
Confidence 799999999888877543 11 2234566667777532 23478899999999999999888999999999999
Q ss_pred HHHHHHhcccccceeEE
Q 021424 108 AYMFAIQHQERVSGVIT 124 (312)
Q Consensus 108 a~~~a~~~p~~v~~lv~ 124 (312)
|..++.++- ++++++
T Consensus 73 At~l~~~~G--irav~~ 87 (191)
T COG3150 73 ATWLGFLCG--IRAVVF 87 (191)
T ss_pred HHHHHHHhC--Chhhhc
Confidence 999999983 666663
No 155
>PLN02606 palmitoyl-protein thioesterase
Probab=97.96 E-value=4.5e-05 Score=64.65 Aligned_cols=101 Identities=17% Similarity=0.152 Sum_probs=65.6
Q ss_pred CCceEEEECCCC--CchhhHHHHHHHHhh-CCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hCCceEE
Q 021424 24 DAHVVVFLHGFP--EIWYSWRHQMVGVAT-AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDH---LGLAKVF 97 (312)
Q Consensus 24 ~~~~vlllHG~~--~~~~~~~~~~~~l~~-~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~---l~~~~~~ 97 (312)
+..|||+.||.+ ++...+..+.+.+.+ .+..+.++- .|-|.. ..-...+.++++.+.+-+.. |. +-++
T Consensus 25 ~~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~----~s~~~~~~~Qv~~vce~l~~~~~L~-~G~n 98 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQ----DSLFMPLRQQASIACEKIKQMKELS-EGYN 98 (306)
T ss_pred CCCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCcc----cccccCHHHHHHHHHHHHhcchhhc-CceE
Confidence 456899999999 454466666555531 255444443 332221 11113455555555544443 32 3599
Q ss_pred EEEcCccHHHHHHHHHhccc--ccceeEEecCCCC
Q 021424 98 LVAKDFGALTAYMFAIQHQE--RVSGVITLGVPIL 130 (312)
Q Consensus 98 lvGhS~Gg~va~~~a~~~p~--~v~~lv~~~~~~~ 130 (312)
+||+|-||.++-.++.++|+ .|+.+|.++++..
T Consensus 99 aIGfSQGglflRa~ierc~~~p~V~nlISlggph~ 133 (306)
T PLN02606 99 IVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHA 133 (306)
T ss_pred EEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcC
Confidence 99999999999999999988 5999999987644
No 156
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.95 E-value=5.2e-05 Score=65.23 Aligned_cols=103 Identities=18% Similarity=0.196 Sum_probs=66.9
Q ss_pred CCceEEEECCCCCchhh--HH-HHHHHHhhCCcEEEeeCCCCCCCCCCC---CCCCCCCHHHHHHHHHHHHHHhCCceEE
Q 021424 24 DAHVVVFLHGFPEIWYS--WR-HQMVGVATAGFRAIAPDCRGYGLSDPP---AEPEKTSFQDMVDDLLAILDHLGLAKVF 97 (312)
Q Consensus 24 ~~~~vlllHG~~~~~~~--~~-~~~~~l~~~~~~vi~~Dl~G~G~S~~~---~~~~~~~~~~~a~di~~~~~~l~~~~~~ 97 (312)
++..+||+|||..+-.+ ++ .++.+-++.....|.+-+|--|.--.- .+...|+-.+++.-|..+.+.....+++
T Consensus 115 ~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I~ 194 (377)
T COG4782 115 AKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRIY 194 (377)
T ss_pred CCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceEE
Confidence 46799999999765432 22 233344344567888999977753110 1123566666777777777777889999
Q ss_pred EEEcCccHHHHHHHHHh----c----ccccceeEEec
Q 021424 98 LVAKDFGALTAYMFAIQ----H----QERVSGVITLG 126 (312)
Q Consensus 98 lvGhS~Gg~va~~~a~~----~----p~~v~~lv~~~ 126 (312)
|++||||.++.+..... . +.+++.+|+..
T Consensus 195 ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAa 231 (377)
T COG4782 195 LLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAA 231 (377)
T ss_pred EEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeC
Confidence 99999999999866432 2 22456666543
No 157
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=97.93 E-value=3.5e-05 Score=65.51 Aligned_cols=93 Identities=17% Similarity=0.259 Sum_probs=63.1
Q ss_pred eEEEECCCCCchhhHH-HHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHH-HHHhC--CceEEEEEcC
Q 021424 27 VVVFLHGFPEIWYSWR-HQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAI-LDHLG--LAKVFLVAKD 102 (312)
Q Consensus 27 ~vlllHG~~~~~~~~~-~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~-~~~l~--~~~~~lvGhS 102 (312)
-|+|.-|..+= |. .+...-++.||.|+.+.+|||+.|...+-+ ..-..-+|.+.+| |.-|| .+.++|.|||
T Consensus 245 LvIC~EGNAGF---YEvG~m~tP~~lgYsvLGwNhPGFagSTG~P~p--~n~~nA~DaVvQfAI~~Lgf~~edIilygWS 319 (517)
T KOG1553|consen 245 LVICFEGNAGF---YEVGVMNTPAQLGYSVLGWNHPGFAGSTGLPYP--VNTLNAADAVVQFAIQVLGFRQEDIILYGWS 319 (517)
T ss_pred EEEEecCCccc---eEeeeecChHHhCceeeccCCCCccccCCCCCc--ccchHHHHHHHHHHHHHcCCCccceEEEEee
Confidence 56777765431 11 122223356899999999999999754322 2222234444443 44565 4679999999
Q ss_pred ccHHHHHHHHHhcccccceeEEe
Q 021424 103 FGALTAYMFAIQHQERVSGVITL 125 (312)
Q Consensus 103 ~Gg~va~~~a~~~p~~v~~lv~~ 125 (312)
.||.-+...|..||+ |+++|+-
T Consensus 320 IGGF~~~waAs~YPd-VkavvLD 341 (517)
T KOG1553|consen 320 IGGFPVAWAASNYPD-VKAVVLD 341 (517)
T ss_pred cCCchHHHHhhcCCC-ceEEEee
Confidence 999999999999996 9999864
No 158
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.93 E-value=6.9e-05 Score=67.33 Aligned_cols=109 Identities=20% Similarity=0.357 Sum_probs=66.3
Q ss_pred eCCeEEEEEecCCCCceEEEEC-CCCCchhhHHHHHHHHhhCCcEE-----Ee-eCCCCCCCCCCCCCCCCCCHHHHHHH
Q 021424 11 VQGLNLHIAEAGADAHVVVFLH-GFPEIWYSWRHQMVGVATAGFRA-----IA-PDCRGYGLSDPPAEPEKTSFQDMVDD 83 (312)
Q Consensus 11 ~~g~~i~~~~~g~~~~~vlllH-G~~~~~~~~~~~~~~l~~~~~~v-----i~-~Dl~G~G~S~~~~~~~~~~~~~~a~d 83 (312)
..|+.|.....|. --.|-.+- .+......|..+++.|...||.. -+ +|.| +| . . ...++...
T Consensus 37 ~~gv~i~~~~~g~-~~~i~~ld~~~~~~~~~~~~li~~L~~~GY~~~~~l~~~pYDWR---~~---~--~--~~~~~~~~ 105 (389)
T PF02450_consen 37 DPGVEIRVPGFGG-TSGIEYLDPSFITGYWYFAKLIENLEKLGYDRGKDLFAAPYDWR---LS---P--A--ERDEYFTK 105 (389)
T ss_pred CCCceeecCCCCc-eeeeeecccccccccchHHHHHHHHHhcCcccCCEEEEEeechh---hc---h--h--hHHHHHHH
Confidence 4566666655552 11222222 22222227889999998877632 22 5665 11 1 1 22234444
Q ss_pred HHHHHHHh---CCceEEEEEcCccHHHHHHHHHhccc------ccceeEEecCCCC
Q 021424 84 LLAILDHL---GLAKVFLVAKDFGALTAYMFAIQHQE------RVSGVITLGVPIL 130 (312)
Q Consensus 84 i~~~~~~l---~~~~~~lvGhS~Gg~va~~~a~~~p~------~v~~lv~~~~~~~ 130 (312)
+.+.++.. ...+++||||||||.++..+....+. .|+++|.+++|..
T Consensus 106 lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 106 LKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred HHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCC
Confidence 44444432 36799999999999999999888753 4999999987754
No 159
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.91 E-value=0.00012 Score=66.67 Aligned_cols=94 Identities=14% Similarity=0.159 Sum_probs=60.1
Q ss_pred CCceEEEECCCC----Cchhh--HHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH--------
Q 021424 24 DAHVVVFLHGFP----EIWYS--WRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILD-------- 89 (312)
Q Consensus 24 ~~~~vlllHG~~----~~~~~--~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~-------- 89 (312)
..|.++++||.+ .+..+ |+..+.. ..+--.+-++|++.-- ..-++..-++-+..|.+
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl-~gevvev~tfdl~n~i--------gG~nI~h~ae~~vSf~r~kvlei~g 245 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSL-KGEVVEVPTFDLNNPI--------GGANIKHAAEYSVSFDRYKVLEITG 245 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhh-hceeeeeccccccCCC--------CCcchHHHHHHHHHHhhhhhhhhhc
Confidence 357899999987 22222 3333322 2233467777776211 11355566666666655
Q ss_pred HhCCceEEEEEcCccHHHHHHHHHhcc-cccceeEEec
Q 021424 90 HLGLAKVFLVAKDFGALTAYMFAIQHQ-ERVSGVITLG 126 (312)
Q Consensus 90 ~l~~~~~~lvGhS~Gg~va~~~a~~~p-~~v~~lv~~~ 126 (312)
++...+++|+|.|||+.|+++++...- ..|+++|+++
T Consensus 246 efpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCig 283 (784)
T KOG3253|consen 246 EFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIG 283 (784)
T ss_pred cCCCCceEEEecccCceeeEEeccccCCceEEEEEEec
Confidence 345668999999999999999987764 3588888876
No 160
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.83 E-value=0.00017 Score=61.31 Aligned_cols=99 Identities=14% Similarity=0.133 Sum_probs=65.9
Q ss_pred CCceEEEECCCCCchhh-----HHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hCCce
Q 021424 24 DAHVVVFLHGFPEIWYS-----WRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDH---LGLAK 95 (312)
Q Consensus 24 ~~~~vlllHG~~~~~~~-----~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~---l~~~~ 95 (312)
...|+|+.||.++++.. +..+++.+ .|..++++-. |.|.. ..-...+.++++.+.+-+.. |. +-
T Consensus 24 ~~~P~ViwHG~GD~c~~~g~~~~~~l~~~~--~g~~~~~i~i---g~~~~--~s~~~~~~~Qve~vce~l~~~~~l~-~G 95 (314)
T PLN02633 24 VSVPFIMLHGIGTQCSDATNANFTQLLTNL--SGSPGFCLEI---GNGVG--DSWLMPLTQQAEIACEKVKQMKELS-QG 95 (314)
T ss_pred CCCCeEEecCCCcccCCchHHHHHHHHHhC--CCCceEEEEE---CCCcc--ccceeCHHHHHHHHHHHHhhchhhh-Cc
Confidence 44689999999876654 33333222 2466666543 44422 22234555666555554444 32 35
Q ss_pred EEEEEcCccHHHHHHHHHhccc--ccceeEEecCCCC
Q 021424 96 VFLVAKDFGALTAYMFAIQHQE--RVSGVITLGVPIL 130 (312)
Q Consensus 96 ~~lvGhS~Gg~va~~~a~~~p~--~v~~lv~~~~~~~ 130 (312)
+++||+|-||.++-.++.+.|+ .|+.+|.++++..
T Consensus 96 ~naIGfSQGGlflRa~ierc~~~p~V~nlISlggph~ 132 (314)
T PLN02633 96 YNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHA 132 (314)
T ss_pred EEEEEEccchHHHHHHHHHCCCCCCcceEEEecCCCC
Confidence 9999999999999999999997 5999999987643
No 161
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.78 E-value=8.6e-05 Score=69.60 Aligned_cols=100 Identities=19% Similarity=0.160 Sum_probs=58.7
Q ss_pred CCceEEEECCCCCchhhHHHHHHHHh----------------hCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 021424 24 DAHVVVFLHGFPEIWYSWRHQMVGVA----------------TAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAI 87 (312)
Q Consensus 24 ~~~~vlllHG~~~~~~~~~~~~~~l~----------------~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~ 87 (312)
+|-|||||.|..||-..=+.++.... ...|+.++.|.=+ .-......++.++++=+.+.
T Consensus 88 sGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnE-----e~tAm~G~~l~dQtEYV~dA 162 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNE-----EFTAMHGHILLDQTEYVNDA 162 (973)
T ss_pred CCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccc-----hhhhhccHhHHHHHHHHHHH
Confidence 57899999999887554443332221 1235556666532 11112234666666655554
Q ss_pred HHH----hCC---------ceEEEEEcCccHHHHHHHHHh---cccccceeEEecCC
Q 021424 88 LDH----LGL---------AKVFLVAKDFGALTAYMFAIQ---HQERVSGVITLGVP 128 (312)
Q Consensus 88 ~~~----l~~---------~~~~lvGhS~Gg~va~~~a~~---~p~~v~~lv~~~~~ 128 (312)
|+. ... ..|+||||||||.||..++.. .++.|.-++..++|
T Consensus 163 Ik~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssP 219 (973)
T KOG3724|consen 163 IKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSP 219 (973)
T ss_pred HHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCc
Confidence 443 222 238999999999999887763 24455555555554
No 162
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.76 E-value=0.00012 Score=68.18 Aligned_cols=103 Identities=14% Similarity=0.165 Sum_probs=64.6
Q ss_pred CCceEEEECCCC---CchhhHHHHHHHHhhC-C-cEEEeeCCC----CCCCCCCCCCCCCCCHHHH---HHHHHHHHHHh
Q 021424 24 DAHVVVFLHGFP---EIWYSWRHQMVGVATA-G-FRAIAPDCR----GYGLSDPPAEPEKTSFQDM---VDDLLAILDHL 91 (312)
Q Consensus 24 ~~~~vlllHG~~---~~~~~~~~~~~~l~~~-~-~~vi~~Dl~----G~G~S~~~~~~~~~~~~~~---a~di~~~~~~l 91 (312)
+.|+||+|||.+ ++...+. ...|... + +-|++++.| |++.+.......++.+.|+ .+.+.+-++..
T Consensus 94 ~~pv~v~ihGG~~~~g~~~~~~--~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~f 171 (493)
T cd00312 94 SLPVMVWIHGGGFMFGSGSLYP--GDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAF 171 (493)
T ss_pred CCCEEEEEcCCccccCCCCCCC--hHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHh
Confidence 468999999953 3333221 1233332 3 899999999 5554432222223445554 34444555556
Q ss_pred CCc--eEEEEEcCccHHHHHHHHHh--cccccceeEEecCC
Q 021424 92 GLA--KVFLVAKDFGALTAYMFAIQ--HQERVSGVITLGVP 128 (312)
Q Consensus 92 ~~~--~~~lvGhS~Gg~va~~~a~~--~p~~v~~lv~~~~~ 128 (312)
|.+ ++.|.|+|-||..+..++.. .+.+++++|+.++.
T Consensus 172 ggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~ 212 (493)
T cd00312 172 GGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGS 212 (493)
T ss_pred CCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCC
Confidence 654 79999999999999888876 34568888876543
No 163
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.71 E-value=0.00055 Score=62.66 Aligned_cols=107 Identities=18% Similarity=0.249 Sum_probs=66.9
Q ss_pred CCceEEEECCCCCchhhH--HHHHHHHhh-CCcEEEeeCCCCCCCCCCCCC-----CCCCCHHHHHHHHHHHHHHhC---
Q 021424 24 DAHVVVFLHGFPEIWYSW--RHQMVGVAT-AGFRAIAPDCRGYGLSDPPAE-----PEKTSFQDMVDDLLAILDHLG--- 92 (312)
Q Consensus 24 ~~~~vlllHG~~~~~~~~--~~~~~~l~~-~~~~vi~~Dl~G~G~S~~~~~-----~~~~~~~~~a~di~~~~~~l~--- 92 (312)
++|++|++=|=..-...| ...+..|++ -+--+|++..|-||.|.+..+ -..-|.++-.+|+..|++++.
T Consensus 28 ~gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~ 107 (434)
T PF05577_consen 28 GGPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKY 107 (434)
T ss_dssp TSEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 466666664433221112 123334443 255799999999999975321 134588888999999998864
Q ss_pred ----CceEEEEEcCccHHHHHHHHHhcccccceeEEecCCCC
Q 021424 93 ----LAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPIL 130 (312)
Q Consensus 93 ----~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~ 130 (312)
-.+++++|-|+||.+|..+-.+||+.|.+.+..++|..
T Consensus 108 ~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 108 NTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp TTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred cCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 23799999999999999999999999999997766543
No 164
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.70 E-value=4e-05 Score=64.37 Aligned_cols=104 Identities=18% Similarity=0.179 Sum_probs=56.6
Q ss_pred CceEEEECCCCCchh---hHHH---HHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-C-ceE
Q 021424 25 AHVVVFLHGFPEIWY---SWRH---QMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLG-L-AKV 96 (312)
Q Consensus 25 ~~~vlllHG~~~~~~---~~~~---~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~-~-~~~ 96 (312)
..|||+.||+++++. .+.. .++... .|-.|.++++ |-|.++........++.++++.+.+.++.-. + +-+
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~-PG~yV~si~i-g~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~G~ 82 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKELIEEQH-PGTYVHSIEI-GNDPSEDVENSFFGNVNDQVEQVCEQLANDPELANGF 82 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHHHHHHHS-TT--EEE--S-SSSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT-E
T ss_pred CCcEEEEEcCccccCChhHHHHHHHHHHHhC-CCceEEEEEE-CCCcchhhhhhHHHHHHHHHHHHHHHHhhChhhhcce
Confidence 458999999997542 3433 333333 3678888887 3332211111112345666666666666522 1 469
Q ss_pred EEEEcCccHHHHHHHHHhccc-ccceeEEecCCCC
Q 021424 97 FLVAKDFGALTAYMFAIQHQE-RVSGVITLGVPIL 130 (312)
Q Consensus 97 ~lvGhS~Gg~va~~~a~~~p~-~v~~lv~~~~~~~ 130 (312)
++||+|-||.+.-.++.++|+ .|+.+|.++++..
T Consensus 83 ~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~ 117 (279)
T PF02089_consen 83 NAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHM 117 (279)
T ss_dssp EEEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT
T ss_pred eeeeeccccHHHHHHHHHCCCCCceeEEEecCccc
Confidence 999999999999999999876 6999999987643
No 165
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.64 E-value=0.0029 Score=52.95 Aligned_cols=64 Identities=11% Similarity=0.253 Sum_probs=51.7
Q ss_pred cccccEEEEeeCCCCCCCCCCchhhhhccchhccCCCceEEEeCCCCCCCCC-cChHHHHHHHHHHh
Q 021424 243 AVKVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQE-QSPEEVNQLILTFL 308 (312)
Q Consensus 243 ~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~GH~~~~-e~p~~~~~~i~~fl 308 (312)
...+|-|+++++.|.+++.+.++++....+ +.--+++.+.+++++|+.|+ ++|++..+.+.+|+
T Consensus 176 ~~~~p~lylYS~~D~l~~~~~ve~~~~~~~--~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWRDVEEHAEEAR--RKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCeEEecCCCCcCcCHHHHHHHHHHHH--HcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 457899999999999998887877764332 22223788899999999988 77999999999985
No 166
>COG0627 Predicted esterase [General function prediction only]
Probab=97.57 E-value=0.00029 Score=61.03 Aligned_cols=107 Identities=18% Similarity=0.277 Sum_probs=65.4
Q ss_pred CCceEEEECCCCCchhhHH--HHHHH-HhhCCcEEEeeCC--------------CCCCCC---CCCCCC--C-CCCHHH-
Q 021424 24 DAHVVVFLHGFPEIWYSWR--HQMVG-VATAGFRAIAPDC--------------RGYGLS---DPPAEP--E-KTSFQD- 79 (312)
Q Consensus 24 ~~~~vlllHG~~~~~~~~~--~~~~~-l~~~~~~vi~~Dl--------------~G~G~S---~~~~~~--~-~~~~~~- 79 (312)
+-|++.++||..++...|. .-++. ....+.-++++|- .|-|.| ++...+ . .|.+..
T Consensus 53 ~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~tf 132 (316)
T COG0627 53 DIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWETF 132 (316)
T ss_pred CCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhHH
Confidence 3468888999887754432 11222 2234566777622 344433 222111 1 255554
Q ss_pred HHHHHHHHHH-HhCC----ceEEEEEcCccHHHHHHHHHhcccccceeEEecCCCC
Q 021424 80 MVDDLLAILD-HLGL----AKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPIL 130 (312)
Q Consensus 80 ~a~di~~~~~-~l~~----~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~ 130 (312)
+.+++-..++ +... ++-.++||||||.=|+.+|++||++++++....+...
T Consensus 133 l~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~ 188 (316)
T COG0627 133 LTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILS 188 (316)
T ss_pred HHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccc
Confidence 4556664444 3432 2688999999999999999999999999997765433
No 167
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.56 E-value=0.00066 Score=61.70 Aligned_cols=122 Identities=15% Similarity=0.139 Sum_probs=79.1
Q ss_pred ceeeeC---CeEEEEEecCC-----CCceEEEECCCCCchhhHHHHHHHHh-------------------hCCcEEEeeC
Q 021424 7 KFIKVQ---GLNLHIAEAGA-----DAHVVVFLHGFPEIWYSWRHQMVGVA-------------------TAGFRAIAPD 59 (312)
Q Consensus 7 ~~~~~~---g~~i~~~~~g~-----~~~~vlllHG~~~~~~~~~~~~~~l~-------------------~~~~~vi~~D 59 (312)
.+++++ +.+++|.-... +.|.||.+.|.|+++-.|-.+.+ .. .+..+++.+|
T Consensus 14 Gyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e-~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD 92 (415)
T PF00450_consen 14 GYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGE-NGPFRINPDGPYTLEDNPYSWNKFANLLFID 92 (415)
T ss_dssp EEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCT-TSSEEEETTSTSEEEE-TT-GGGTSEEEEE-
T ss_pred EEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccc-cCceEEeecccccccccccccccccceEEEe
Confidence 466665 67888753321 56899999999998887743222 11 1236899999
Q ss_pred -CCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHh-------CCceEEEEEcCccHHHHHHHHHh----c------ccccc
Q 021424 60 -CRGYGLSDPPAEP-EKTSFQDMVDDLLAILDHL-------GLAKVFLVAKDFGALTAYMFAIQ----H------QERVS 120 (312)
Q Consensus 60 -l~G~G~S~~~~~~-~~~~~~~~a~di~~~~~~l-------~~~~~~lvGhS~Gg~va~~~a~~----~------p~~v~ 120 (312)
..|.|.|...... ...+..+.|+|+..||+.. .-.+++|.|-|+||.-+-.+|.. . +-.++
T Consensus 93 ~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLk 172 (415)
T PF00450_consen 93 QPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLK 172 (415)
T ss_dssp -STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEE
T ss_pred ecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccc
Confidence 5599999764332 2457888999999988885 55689999999999876666543 3 22367
Q ss_pred eeEEecCCC
Q 021424 121 GVITLGVPI 129 (312)
Q Consensus 121 ~lv~~~~~~ 129 (312)
++++.++..
T Consensus 173 Gi~IGng~~ 181 (415)
T PF00450_consen 173 GIAIGNGWI 181 (415)
T ss_dssp EEEEESE-S
T ss_pred cceecCccc
Confidence 888665443
No 168
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.54 E-value=0.0002 Score=51.42 Aligned_cols=60 Identities=17% Similarity=0.275 Sum_probs=49.7
Q ss_pred cccEEEEeeCCCCCCCCCCchhhhhccchhccCCCceEEEeCCCCCCCCCcChHHHHHHHHHHhhh
Q 021424 245 KVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLNK 310 (312)
Q Consensus 245 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~~ 310 (312)
..|+|+|.++.|++.|.+. .+.+++.+++++++.+++.||......-.-+.+.+.+||.+
T Consensus 34 ~~piL~l~~~~Dp~TP~~~------a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEG------ARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHH------HHHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 5899999999999987533 44677788999999999999999875456678889999864
No 169
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.50 E-value=0.00036 Score=54.09 Aligned_cols=52 Identities=19% Similarity=0.303 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHh----CCceEEEEEcCccHHHHHHHHHhccc----ccceeEEecCCC
Q 021424 78 QDMVDDLLAILDHL----GLAKVFLVAKDFGALTAYMFAIQHQE----RVSGVITLGVPI 129 (312)
Q Consensus 78 ~~~a~di~~~~~~l----~~~~~~lvGhS~Gg~va~~~a~~~p~----~v~~lv~~~~~~ 129 (312)
..+.+.+...++.. ...+++++|||+||.+|..+|...+. ++..++..+++.
T Consensus 8 ~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 8 RSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 34445555555544 67899999999999999999988765 466666666553
No 170
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=97.49 E-value=0.00019 Score=60.38 Aligned_cols=107 Identities=19% Similarity=0.252 Sum_probs=70.4
Q ss_pred CCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCC------CCCCC---CC------------------C
Q 021424 24 DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDP------PAEPE---KT------------------S 76 (312)
Q Consensus 24 ~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~------~~~~~---~~------------------~ 76 (312)
+-|.|||.||.+++...|...--.|++.||-|.++..|-+--+-. ++++. .+ .
T Consensus 117 k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irNeq 196 (399)
T KOG3847|consen 117 KYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRNEQ 196 (399)
T ss_pred CccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeCHH
Confidence 348999999999998888777678889999999999987654421 11110 00 1
Q ss_pred HHHHHHHHHH---HHHHh------------------------CCceEEEEEcCccHHHHHHHHHhcccccceeEEecCCC
Q 021424 77 FQDMVDDLLA---ILDHL------------------------GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPI 129 (312)
Q Consensus 77 ~~~~a~di~~---~~~~l------------------------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~ 129 (312)
+..-++++.. +++++ .-+++.++|||+||..+....+.+. +++.-|.+|+.+
T Consensus 197 v~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~lD~WM 275 (399)
T KOG3847|consen 197 VGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCAIALDAWM 275 (399)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc-ceeeeeeeeeee
Confidence 1122333322 22222 2246789999999999888777665 577777777655
Q ss_pred CC
Q 021424 130 LP 131 (312)
Q Consensus 130 ~~ 131 (312)
.+
T Consensus 276 ~P 277 (399)
T KOG3847|consen 276 FP 277 (399)
T ss_pred cc
Confidence 54
No 171
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.43 E-value=0.00018 Score=64.00 Aligned_cols=96 Identities=18% Similarity=0.352 Sum_probs=71.1
Q ss_pred ECCC-----CCchh-hHHHHHHHHhhCCcE------EEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEE
Q 021424 31 LHGF-----PEIWY-SWRHQMVGVATAGFR------AIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFL 98 (312)
Q Consensus 31 lHG~-----~~~~~-~~~~~~~~l~~~~~~------vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~~~~l 98 (312)
+.|| ....+ .|..+++.|..-||. -..+|.| .+. ...+..+-.+.++..-|+...+.-|..|++|
T Consensus 110 vpgf~s~~~ld~~y~~w~~~i~~lv~~GYe~~~~l~ga~YDwR-ls~--~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvl 186 (473)
T KOG2369|consen 110 VPGFESLDYLDPGYWYWHELIENLVGIGYERGKTLFGAPYDWR-LSY--HNSEERDQYLSKLKKKIETMYKLNGGKKVVL 186 (473)
T ss_pred cCCceeeecccchhHHHHHHHHHHHhhCcccCceeeccccchh-hcc--CChhHHHHHHHHHHHHHHHHHHHcCCCceEE
Confidence 5777 23444 788899999877775 4567777 222 2223334568888888888888888899999
Q ss_pred EEcCccHHHHHHHHHhccc--------ccceeEEecCCC
Q 021424 99 VAKDFGALTAYMFAIQHQE--------RVSGVITLGVPI 129 (312)
Q Consensus 99 vGhS~Gg~va~~~a~~~p~--------~v~~lv~~~~~~ 129 (312)
|+|||||.+...+...+++ -+++++.++.+.
T Consensus 187 isHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p~ 225 (473)
T KOG2369|consen 187 ISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAPW 225 (473)
T ss_pred EecCCccHHHHHHHhcccccchhHHHHHHHHHHccCchh
Confidence 9999999999999988877 367777776553
No 172
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=97.42 E-value=0.00054 Score=63.07 Aligned_cols=113 Identities=16% Similarity=0.131 Sum_probs=76.1
Q ss_pred CCeEEEEEecCC----CCceEEEECCCCCchhh---H--HHHHH---HHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHH
Q 021424 12 QGLNLHIAEAGA----DAHVVVFLHGFPEIWYS---W--RHQMV---GVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQD 79 (312)
Q Consensus 12 ~g~~i~~~~~g~----~~~~vlllHG~~~~~~~---~--~~~~~---~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~ 79 (312)
||++|+...+-+ ..|+++..+=+|-...+ + ....+ .++..||-||..|.||.|.|+..-++ .++ +
T Consensus 28 DGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~-~~~--~ 104 (563)
T COG2936 28 DGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDP-ESS--R 104 (563)
T ss_pred CCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcccce-ecc--c
Confidence 899999776543 34778878833433331 1 11222 36678999999999999999865332 222 2
Q ss_pred HHHHHH---HHHHHhC--CceEEEEEcCccHHHHHHHHHhcccccceeEEecC
Q 021424 80 MVDDLL---AILDHLG--LAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGV 127 (312)
Q Consensus 80 ~a~di~---~~~~~l~--~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~ 127 (312)
-++|-. +.+.... -.+|-.+|-|++|...+.+|+..|--+++++.+.+
T Consensus 105 E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~ 157 (563)
T COG2936 105 EAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEG 157 (563)
T ss_pred cccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeeccccc
Confidence 333333 3333333 34799999999999999999999888998886543
No 173
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.42 E-value=0.0035 Score=54.51 Aligned_cols=102 Identities=12% Similarity=0.117 Sum_probs=66.3
Q ss_pred eEEEECCCCCchh---hHHHHHHHHhhCCcEEEeeCCCC--CCCCCC--------------C-CCCCC----------C-
Q 021424 27 VVVFLHGFPEIWY---SWRHQMVGVATAGFRAIAPDCRG--YGLSDP--------------P-AEPEK----------T- 75 (312)
Q Consensus 27 ~vlllHG~~~~~~---~~~~~~~~l~~~~~~vi~~Dl~G--~G~S~~--------------~-~~~~~----------~- 75 (312)
.||+|||++.+.. .-..+-..|.+.|+..+++-+|. -..+.. . ..+.. -
T Consensus 89 ~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 168 (310)
T PF12048_consen 89 AVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEAEA 168 (310)
T ss_pred EEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHhHH
Confidence 7999999987652 22234455777899999998887 211100 0 00000 0
Q ss_pred ------CHHHHHHHHHHHHHHhCCceEEEEEcCccHHHHHHHHHhccc-ccceeEEecCC
Q 021424 76 ------SFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQE-RVSGVITLGVP 128 (312)
Q Consensus 76 ------~~~~~a~di~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~-~v~~lv~~~~~ 128 (312)
.+....+...+++++.+..+++||||+.|+..+..|.+..+. .+.++|++++.
T Consensus 169 ~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~ 228 (310)
T PF12048_consen 169 REAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAY 228 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCC
Confidence 112223334445555677779999999999999999988765 59999999753
No 174
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.42 E-value=0.0029 Score=52.25 Aligned_cols=56 Identities=16% Similarity=0.333 Sum_probs=44.7
Q ss_pred EEEEeeCCCCCCCCCCchhhhhccchhccCCCceEEEeCCCCCCC-CCcChHHHHHHHHHHhhh
Q 021424 248 ALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFV-QEQSPEEVNQLILTFLNK 310 (312)
Q Consensus 248 ~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~GH~~-~~e~p~~~~~~i~~fl~~ 310 (312)
+.++..++|..++..++.. +.+..|++++..++ .||.. ++-+-|+|-+.|.+-|++
T Consensus 309 ~ivv~A~~D~Yipr~gv~~------lQ~~WPg~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R 365 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRS------LQEIWPGCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDR 365 (371)
T ss_pred EEEEEecCCccccccCcHH------HHHhCCCCEEEEee-cCceeeeehhchHHHHHHHHHHHh
Confidence 5677889998887665544 45679999999998 79955 667789999999998864
No 175
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.34 E-value=0.0023 Score=52.91 Aligned_cols=99 Identities=19% Similarity=0.182 Sum_probs=65.6
Q ss_pred ceEEEECCCCCchhh--HHHHHHHHhh-CCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-C-ceEEEEE
Q 021424 26 HVVVFLHGFPEIWYS--WRHQMVGVAT-AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLG-L-AKVFLVA 100 (312)
Q Consensus 26 ~~vlllHG~~~~~~~--~~~~~~~l~~-~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~-~-~~~~lvG 100 (312)
-|+|++||.++++.+ ...+.+.+.+ .|..|+++|. |=| .+ +.....+.++++-+.+-++... + +-+++||
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g--~~--~s~l~pl~~Qv~~~ce~v~~m~~lsqGynivg 98 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDG--IK--DSSLMPLWEQVDVACEKVKQMPELSQGYNIVG 98 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCC--cc--hhhhccHHHHHHHHHHHHhcchhccCceEEEE
Confidence 479999999877765 4444433332 2678889886 344 11 1122345555555554444321 1 3499999
Q ss_pred cCccHHHHHHHHHhccc-ccceeEEecCCC
Q 021424 101 KDFGALTAYMFAIQHQE-RVSGVITLGVPI 129 (312)
Q Consensus 101 hS~Gg~va~~~a~~~p~-~v~~lv~~~~~~ 129 (312)
.|-||.++-.++...|+ .|.++|.++++.
T Consensus 99 ~SQGglv~Raliq~cd~ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 99 YSQGGLVARALIQFCDNPPVKNFISLGGPH 128 (296)
T ss_pred EccccHHHHHHHHhCCCCCcceeEeccCCc
Confidence 99999999999988766 699999998764
No 176
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=97.27 E-value=0.0046 Score=56.27 Aligned_cols=65 Identities=18% Similarity=0.320 Sum_probs=49.8
Q ss_pred cccEEEEeeCCCCCCCCCCchhhhhccc------------------hhccCC-CceEEEeCCCCCCCCCcChHHHHHHHH
Q 021424 245 KVPALLIMGDKDYFLKFPGIEDYIRSGK------------------AKDLVP-NLEIIHLPEGSHFVQEQSPEEVNQLIL 305 (312)
Q Consensus 245 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~------------------~~~~~p-~~~~~~~~~~GH~~~~e~p~~~~~~i~ 305 (312)
.++||+..|+.|-+++..+.+.++.+.. ..+.+. +.+++.+.+|||+++ .+|+...+.+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 5799999999999888766655543221 112233 388999999999996 58999999999
Q ss_pred HHhhh
Q 021424 306 TFLNK 310 (312)
Q Consensus 306 ~fl~~ 310 (312)
.||..
T Consensus 426 ~Fi~~ 430 (433)
T PLN03016 426 RWISG 430 (433)
T ss_pred HHHcC
Confidence 99975
No 177
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.22 E-value=0.0049 Score=52.74 Aligned_cols=65 Identities=22% Similarity=0.443 Sum_probs=46.2
Q ss_pred ccc-ccEEEEeeCCCCCCCCCCchhhhhccchhccCCCceEEEeCCCCCCCCCcChH---HHHHHHHHHhhhc
Q 021424 243 AVK-VPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQSPE---EVNQLILTFLNKH 311 (312)
Q Consensus 243 ~i~-~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~GH~~~~e~p~---~~~~~i~~fl~~~ 311 (312)
++. +|+|+++|..|..+|........... +.. ..+...+++++|......+. +..+.+.+|+.++
T Consensus 229 ~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~---~~~-~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 229 KISPRPVLLVHGERDEVVPLRDAEDLYEAA---RER-PKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred hcCCcceEEEecCCCcccchhhhHHHHhhh---ccC-CceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 454 79999999999999876555444221 111 45788889999999875544 6777888888764
No 178
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.22 E-value=0.001 Score=50.56 Aligned_cols=38 Identities=13% Similarity=0.241 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHhCCceEEEEEcCccHHHHHHHHHhcc
Q 021424 79 DMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQ 116 (312)
Q Consensus 79 ~~a~di~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p 116 (312)
...+.+.++++..+-.++++.|||+||.+|..+|....
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~ 86 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAAADLA 86 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhh
Confidence 45566777777777678999999999999999988754
No 179
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.22 E-value=0.0083 Score=52.99 Aligned_cols=58 Identities=21% Similarity=0.300 Sum_probs=42.9
Q ss_pred cccccEEEEeeCCCCCCCCCCchhhhhccchhccCCC-ceEEEeCCCCCCCCCcChHHHHHHHHHHhh
Q 021424 243 AVKVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPN-LEIIHLPEGSHFVQEQSPEEVNQLILTFLN 309 (312)
Q Consensus 243 ~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~ 309 (312)
++++|.++|.|..|+++.+....-|+. .+|+ -.+..+||++|..-. ..+.+.+..|+.
T Consensus 260 rL~~PK~ii~atgDeFf~pD~~~~y~d------~L~G~K~lr~vPN~~H~~~~---~~~~~~l~~f~~ 318 (367)
T PF10142_consen 260 RLTMPKYIINATGDEFFVPDSSNFYYD------KLPGEKYLRYVPNAGHSLIG---SDVVQSLRAFYN 318 (367)
T ss_pred hcCccEEEEecCCCceeccCchHHHHh------hCCCCeeEEeCCCCCcccch---HHHHHHHHHHHH
Confidence 579999999999999886655554442 2344 467889999999877 556666777764
No 180
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.15 E-value=0.0016 Score=60.21 Aligned_cols=89 Identities=17% Similarity=0.284 Sum_probs=54.0
Q ss_pred hHHHHHHHHhhCCcEEEeeCCCCCCCCCCCC----CCCCCCHHHHHHHHHHHHHHhCCceEEEEEcCccHHHHHHHHHhc
Q 021424 40 SWRHQMVGVATAGFRAIAPDCRGYGLSDPPA----EPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQH 115 (312)
Q Consensus 40 ~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~----~~~~~~~~~~a~di~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~ 115 (312)
-|..+++.|...||. --|+.|..+=-+.. +..+-.+..+-+-|+...+.-+..|++||||||||.+++.+...-
T Consensus 157 vw~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv 234 (642)
T PLN02517 157 VWAVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWV 234 (642)
T ss_pred eHHHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhc
Confidence 568899999988885 45555544322111 001111233333333333334568999999999999999876521
Q ss_pred -----------c----cccceeEEecCCCC
Q 021424 116 -----------Q----ERVSGVITLGVPIL 130 (312)
Q Consensus 116 -----------p----~~v~~lv~~~~~~~ 130 (312)
+ ..|+++|.++++..
T Consensus 235 ~~~~~~gG~gG~~W~dKyI~s~I~Iagp~l 264 (642)
T PLN02517 235 EAPAPMGGGGGPGWCAKHIKAVMNIGGPFL 264 (642)
T ss_pred cccccccCCcchHHHHHHHHHheecccccC
Confidence 1 24788898877644
No 181
>KOG3101 consensus Esterase D [General function prediction only]
Probab=97.06 E-value=0.0007 Score=53.91 Aligned_cols=104 Identities=18% Similarity=0.311 Sum_probs=66.7
Q ss_pred CceEEEECCCCCchhhHHH--HH-HHHhhCCcEEEeeCCCCCCC-----CCCC--CC-----------C--CCCCHHHH-
Q 021424 25 AHVVVFLHGFPEIWYSWRH--QM-VGVATAGFRAIAPDCRGYGL-----SDPP--AE-----------P--EKTSFQDM- 80 (312)
Q Consensus 25 ~~~vlllHG~~~~~~~~~~--~~-~~l~~~~~~vi~~Dl~G~G~-----S~~~--~~-----------~--~~~~~~~~- 80 (312)
-|+|.+|-|..++.+.|-. -. +.....|+-|++||--=-|. ++.- .. + ..|.|-++
T Consensus 44 ~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv 123 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDYV 123 (283)
T ss_pred CceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHHH
Confidence 3789999999998887642 11 23344678899999533332 1110 00 0 12444443
Q ss_pred HHHHHHHHHH----hCCceEEEEEcCccHHHHHHHHHhcccccceeEEecCC
Q 021424 81 VDDLLAILDH----LGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 128 (312)
Q Consensus 81 a~di~~~~~~----l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 128 (312)
.+++.+++.. ++..++.|.||||||.=|+..+.++|.+.+++-..++.
T Consensus 124 ~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI 175 (283)
T KOG3101|consen 124 VKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPI 175 (283)
T ss_pred HHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccc
Confidence 3344444442 23457889999999999999999999999988765543
No 182
>PLN02209 serine carboxypeptidase
Probab=97.02 E-value=0.011 Score=53.78 Aligned_cols=65 Identities=20% Similarity=0.360 Sum_probs=50.4
Q ss_pred cccEEEEeeCCCCCCCCCCchhhhhccc------------------hhccCCC-ceEEEeCCCCCCCCCcChHHHHHHHH
Q 021424 245 KVPALLIMGDKDYFLKFPGIEDYIRSGK------------------AKDLVPN-LEIIHLPEGSHFVQEQSPEEVNQLIL 305 (312)
Q Consensus 245 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~------------------~~~~~p~-~~~~~~~~~GH~~~~e~p~~~~~~i~ 305 (312)
.+++|+..|+.|-+++..+.+.++.+.. ..+.+.+ .+++.+.+|||+++ .+|++..+.+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 4799999999999988766655544221 1123454 89999999999996 69999999999
Q ss_pred HHhhh
Q 021424 306 TFLNK 310 (312)
Q Consensus 306 ~fl~~ 310 (312)
+|+..
T Consensus 430 ~fi~~ 434 (437)
T PLN02209 430 RWISG 434 (437)
T ss_pred HHHcC
Confidence 99964
No 183
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.91 E-value=0.0088 Score=47.82 Aligned_cols=101 Identities=14% Similarity=0.175 Sum_probs=60.4
Q ss_pred eEEEECCCCC-chhhHH---------------HHHHHHhhCCcEEEeeCCCC---CCCC-CCCCCCCCCCHHHHHHHH-H
Q 021424 27 VVVFLHGFPE-IWYSWR---------------HQMVGVATAGFRAIAPDCRG---YGLS-DPPAEPEKTSFQDMVDDL-L 85 (312)
Q Consensus 27 ~vlllHG~~~-~~~~~~---------------~~~~~l~~~~~~vi~~Dl~G---~G~S-~~~~~~~~~~~~~~a~di-~ 85 (312)
-+|||||-+- -...|- +.+.+..++||.|+....-- +-.+ +.|.. ...+--+.+.-+ .
T Consensus 103 LlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~k-yirt~veh~~yvw~ 181 (297)
T KOG3967|consen 103 LLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQK-YIRTPVEHAKYVWK 181 (297)
T ss_pred eEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcch-hccchHHHHHHHHH
Confidence 6999999763 222342 22334446789999886541 1111 11111 111222233222 2
Q ss_pred HHHHHhCCceEEEEEcCccHHHHHHHHHhccc--ccceeEEecCC
Q 021424 86 AILDHLGLAKVFLVAKDFGALTAYMFAIQHQE--RVSGVITLGVP 128 (312)
Q Consensus 86 ~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~--~v~~lv~~~~~ 128 (312)
.++....-+.+.+|.||+||...+.+..++|+ +|.++.+.+++
T Consensus 182 ~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 182 NIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred HHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 23444456789999999999999999999986 67777777765
No 184
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=96.86 E-value=0.0068 Score=54.82 Aligned_cols=102 Identities=21% Similarity=0.245 Sum_probs=70.2
Q ss_pred CCceEEEECCCCCchhhHHHHHHHHhh-------------------CCcEEEeeC-CCCCCCCCCCCCCCCCCHHHHHHH
Q 021424 24 DAHVVVFLHGFPEIWYSWRHQMVGVAT-------------------AGFRAIAPD-CRGYGLSDPPAEPEKTSFQDMVDD 83 (312)
Q Consensus 24 ~~~~vlllHG~~~~~~~~~~~~~~l~~-------------------~~~~vi~~D-l~G~G~S~~~~~~~~~~~~~~a~d 83 (312)
+.|.++.+.|.|+++-.|-.+.+ +.. ..-.+|.+| ..|.|.|....+...-++....+|
T Consensus 100 ~rPvi~wlNGGPGcSS~~g~l~e-lGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D 178 (498)
T COG2939 100 NRPVIFWLNGGPGCSSVTGLLGE-LGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAGKD 178 (498)
T ss_pred CCceEEEecCCCChHhhhhhhhh-cCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccchh
Confidence 46899999999998887764321 110 113689999 889999985333344566667777
Q ss_pred HHHHHHHh---------CCceEEEEEcCccHHHHHHHHHhcccc---cceeEEec
Q 021424 84 LLAILDHL---------GLAKVFLVAKDFGALTAYMFAIQHQER---VSGVITLG 126 (312)
Q Consensus 84 i~~~~~~l---------~~~~~~lvGhS~Gg~va~~~a~~~p~~---v~~lv~~~ 126 (312)
+..|.+.. ...+.+|+|-|+||.-+-.+|..-.++ ..++|++.
T Consensus 179 ~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nls 233 (498)
T COG2939 179 VYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLS 233 (498)
T ss_pred HHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEee
Confidence 77766553 246899999999998888887665443 55555543
No 185
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=96.74 E-value=0.0065 Score=57.08 Aligned_cols=103 Identities=15% Similarity=0.132 Sum_probs=62.6
Q ss_pred CceEEEECCCC---Cch--hhHHHHHHHHhhCCcEEEeeCCC----CCCCCCCCCCC-CCCCHHHH---HHHHHHHHHHh
Q 021424 25 AHVVVFLHGFP---EIW--YSWRHQMVGVATAGFRAIAPDCR----GYGLSDPPAEP-EKTSFQDM---VDDLLAILDHL 91 (312)
Q Consensus 25 ~~~vlllHG~~---~~~--~~~~~~~~~l~~~~~~vi~~Dl~----G~G~S~~~~~~-~~~~~~~~---a~di~~~~~~l 91 (312)
-|++|+|||.+ ++. ..+. ....+..++.=||++..| ||-.+.....+ .++.+.|+ .+.|.+-|...
T Consensus 125 lPV~v~ihGG~f~~G~~~~~~~~-~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~F 203 (535)
T PF00135_consen 125 LPVMVWIHGGGFMFGSGSFPPYD-GASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAF 203 (535)
T ss_dssp EEEEEEE--STTTSSCTTSGGGH-THHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGG
T ss_pred cceEEEeecccccCCCccccccc-ccccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhc
Confidence 48999999853 333 3343 233445567888888877 44433322222 45666665 45666677777
Q ss_pred CCc--eEEEEEcCccHHHHHHHHHhc--ccccceeEEecCC
Q 021424 92 GLA--KVFLVAKDFGALTAYMFAIQH--QERVSGVITLGVP 128 (312)
Q Consensus 92 ~~~--~~~lvGhS~Gg~va~~~a~~~--p~~v~~lv~~~~~ 128 (312)
|.+ +|.|.|||-||..+......- ...+.+.|+.++.
T Consensus 204 GGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs 244 (535)
T PF00135_consen 204 GGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGS 244 (535)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--
T ss_pred ccCCcceeeeeecccccccceeeeccccccccccccccccc
Confidence 765 599999999999888777662 2478998887653
No 186
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.72 E-value=0.0037 Score=49.37 Aligned_cols=54 Identities=26% Similarity=0.290 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHhC-----CceEEEEEcCccHHHHHHHHHhcccccceeEEecCCCC
Q 021424 77 FQDMVDDLLAILDHLG-----LAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPIL 130 (312)
Q Consensus 77 ~~~~a~di~~~~~~l~-----~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~ 130 (312)
-+.-+.++..|++.|. -.++.++|||||+.++-..+...+..+..+|++++|-.
T Consensus 87 A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~ 145 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGM 145 (177)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCC
Confidence 4567888888888874 23588999999999999988887789999999987643
No 187
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=96.69 E-value=0.014 Score=52.71 Aligned_cols=111 Identities=18% Similarity=0.191 Sum_probs=68.4
Q ss_pred CCeEEEEEecC-C--CCceEEEECCCC---Cchhh--HHHHHHHHhhCC-cEEEeeCCC----------CCCCCCCCCCC
Q 021424 12 QGLNLHIAEAG-A--DAHVVVFLHGFP---EIWYS--WRHQMVGVATAG-FRAIAPDCR----------GYGLSDPPAEP 72 (312)
Q Consensus 12 ~g~~i~~~~~g-~--~~~~vlllHG~~---~~~~~--~~~~~~~l~~~~-~~vi~~Dl~----------G~G~S~~~~~~ 72 (312)
|.+.++.+.-- + +.|++|+|||.+ ++... |+. ..|..+| +=||++++| .++..+ ...
T Consensus 78 DCL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~ydg--s~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~--~~~ 153 (491)
T COG2272 78 DCLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYDG--SALAARGDVVVVSVNYRLGALGFLDLSSLDTED--AFA 153 (491)
T ss_pred cceeEEeeccCCCCCCCcEEEEEeccccccCCCcccccCh--HHHHhcCCEEEEEeCcccccceeeehhhccccc--ccc
Confidence 44555554322 2 459999999853 33333 443 3677766 778877766 222111 111
Q ss_pred CCCCHHHH---HHHHHHHHHHhCCc--eEEEEEcCccHHHHHHHHHhccc---ccceeEEecC
Q 021424 73 EKTSFQDM---VDDLLAILDHLGLA--KVFLVAKDFGALTAYMFAIQHQE---RVSGVITLGV 127 (312)
Q Consensus 73 ~~~~~~~~---a~di~~~~~~l~~~--~~~lvGhS~Gg~va~~~a~~~p~---~v~~lv~~~~ 127 (312)
++..+.|+ .+.+.+-|++.|.| +|.|.|+|-|+..++.+.+. |+ .+.+.|+.++
T Consensus 154 ~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg 215 (491)
T COG2272 154 SNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSG 215 (491)
T ss_pred ccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCC
Confidence 23345554 56777888888876 49999999999988877654 43 5666666544
No 188
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=96.64 E-value=0.017 Score=50.89 Aligned_cols=114 Identities=14% Similarity=0.139 Sum_probs=71.1
Q ss_pred CeEEEEEecC----C-CCceEEEECCCCCchhhHHHHHH------HHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHH
Q 021424 13 GLNLHIAEAG----A-DAHVVVFLHGFPEIWYSWRHQMV------GVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMV 81 (312)
Q Consensus 13 g~~i~~~~~g----~-~~~~vlllHG~~~~~~~~~~~~~------~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a 81 (312)
-..++..+.. + +.|+|+++||.+--......+++ .+.+ .-.++++|.--... ......-++.+.+.+
T Consensus 105 ~~s~Wlvk~P~~~~pk~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~-~~~~~~yPtQL~qlv 182 (374)
T PF10340_consen 105 SQSYWLVKAPNRFKPKSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTSS-DEHGHKYPTQLRQLV 182 (374)
T ss_pred cceEEEEeCCcccCCCCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEecccccc-ccCCCcCchHHHHHH
Confidence 3346665532 2 35899999997633332222222 3334 45888888764430 001112345677778
Q ss_pred HHHHHHHHHhCCceEEEEEcCccHHHHHHHHHh--cccc---cceeEEecCC
Q 021424 82 DDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQ--HQER---VSGVITLGVP 128 (312)
Q Consensus 82 ~di~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~--~p~~---v~~lv~~~~~ 128 (312)
+-...+++..|.++++|+|-|-||.+++.+... .+++ -+++|++.+.
T Consensus 183 ~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPW 234 (374)
T PF10340_consen 183 ATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPW 234 (374)
T ss_pred HHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCC
Confidence 888888888899999999999999999887643 2222 3677777653
No 189
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=96.60 E-value=0.015 Score=51.53 Aligned_cols=32 Identities=19% Similarity=0.145 Sum_probs=29.0
Q ss_pred eEEEEEcCccHHHHHHHHHhcccccceeEEec
Q 021424 95 KVFLVAKDFGALTAYMFAIQHQERVSGVITLG 126 (312)
Q Consensus 95 ~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~ 126 (312)
+++++|+|.||++|...|.-.|..+++++=.+
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns 216 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNS 216 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecC
Confidence 78899999999999999999999999988433
No 190
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.58 E-value=0.013 Score=51.62 Aligned_cols=100 Identities=17% Similarity=0.209 Sum_probs=68.5
Q ss_pred ceEEEECCCCCchhhHH-------HHHHHHhhCCcEEEeeCCCCCCCCCCCCCCC--------CCCHHHHHHHHHHHHHH
Q 021424 26 HVVVFLHGFPEIWYSWR-------HQMVGVATAGFRAIAPDCRGYGLSDPPAEPE--------KTSFQDMVDDLLAILDH 90 (312)
Q Consensus 26 ~~vlllHG~~~~~~~~~-------~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~--------~~~~~~~a~di~~~~~~ 90 (312)
-||+|--|.=++...|- ++++.| +--+|....|=||+|-+-...+ .-+.++-..|..+++..
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~---~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~ 157 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPEL---KALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTF 157 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhh---CceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHH
Confidence 46889988655444322 234433 3468999999999996532211 12444445566666666
Q ss_pred hC------CceEEEEEcCccHHHHHHHHHhcccccceeEEecCC
Q 021424 91 LG------LAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 128 (312)
Q Consensus 91 l~------~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 128 (312)
|. ..+|+.+|-|+||++|..+=.+||+.|.+.....+|
T Consensus 158 lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAP 201 (492)
T KOG2183|consen 158 LKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAP 201 (492)
T ss_pred HhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCc
Confidence 64 347999999999999999999999999887754444
No 191
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.55 E-value=0.0053 Score=50.97 Aligned_cols=25 Identities=16% Similarity=0.275 Sum_probs=21.2
Q ss_pred CCceEEEEEcCccHHHHHHHHHhcc
Q 021424 92 GLAKVFLVAKDFGALTAYMFAIQHQ 116 (312)
Q Consensus 92 ~~~~~~lvGhS~Gg~va~~~a~~~p 116 (312)
.-.++.+.|||+||.+|..+|....
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l~ 150 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDLR 150 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHHH
Confidence 4568999999999999999987643
No 192
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.51 E-value=0.0058 Score=50.39 Aligned_cols=44 Identities=25% Similarity=0.288 Sum_probs=32.6
Q ss_pred HHHHHHHhCCceEEEEEcCccHHHHHHHHHhc----ccccceeEEecCC
Q 021424 84 LLAILDHLGLAKVFLVAKDFGALTAYMFAIQH----QERVSGVITLGVP 128 (312)
Q Consensus 84 i~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~----p~~v~~lv~~~~~ 128 (312)
+..+++..+. ++.+.|||.||.+|+..|+.. .++|.++...++|
T Consensus 75 l~~~~~~~~~-~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgP 122 (224)
T PF11187_consen 75 LKKIAKKYPG-KIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGP 122 (224)
T ss_pred HHHHHHhCCC-CEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCC
Confidence 3334444444 599999999999999999884 3477888877765
No 193
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.28 E-value=0.028 Score=45.44 Aligned_cols=98 Identities=19% Similarity=0.272 Sum_probs=68.6
Q ss_pred ceEEEECCCCCchh--hH-HHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC----ceEEE
Q 021424 26 HVVVFLHGFPEIWY--SW-RHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGL----AKVFL 98 (312)
Q Consensus 26 ~~vlllHG~~~~~~--~~-~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~----~~~~l 98 (312)
.-||||-|.++.-- .| ..+...|.+.++.++-+-++.+= ..-...++.+-++|+..++++++. ++++|
T Consensus 37 ~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy-----~G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL 111 (299)
T KOG4840|consen 37 VKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSY-----NGYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVL 111 (299)
T ss_pred EEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccc-----cccccccccccHHHHHHHHHHhhccCcccceEE
Confidence 46899998875332 23 34556677788999988876321 111234677789999999998753 37999
Q ss_pred EEcCccHHHHHHHHH--hcccccceeEEecCC
Q 021424 99 VAKDFGALTAYMFAI--QHQERVSGVITLGVP 128 (312)
Q Consensus 99 vGhS~Gg~va~~~a~--~~p~~v~~lv~~~~~ 128 (312)
+|||-|+-=.+.|.. ..|..+++.|+.++.
T Consensus 112 ~GhSTGcQdi~yYlTnt~~~r~iraaIlqApV 143 (299)
T KOG4840|consen 112 VGHSTGCQDIMYYLTNTTKDRKIRAAILQAPV 143 (299)
T ss_pred EecCccchHHHHHHHhccchHHHHHHHHhCcc
Confidence 999999998888873 346667777766543
No 194
>PLN02162 triacylglycerol lipase
Probab=96.27 E-value=0.012 Score=53.13 Aligned_cols=55 Identities=22% Similarity=0.356 Sum_probs=37.7
Q ss_pred CHHHHHHHHHHHHHHhCCceEEEEEcCccHHHHHHHHHh---c-----ccccceeEEecCCCC
Q 021424 76 SFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQ---H-----QERVSGVITLGVPIL 130 (312)
Q Consensus 76 ~~~~~a~di~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~---~-----p~~v~~lv~~~~~~~ 130 (312)
.+...-+.+.++++...-.++++.|||+||.+|...|+. + .+++.+++..|+|-.
T Consensus 260 ay~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqPRV 322 (475)
T PLN02162 260 AYYTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQPRV 322 (475)
T ss_pred hHHHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCCCc
Confidence 344555666777777777789999999999999998652 1 123445666666544
No 195
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=96.22 E-value=0.011 Score=38.05 Aligned_cols=37 Identities=22% Similarity=0.395 Sum_probs=19.9
Q ss_pred ccceeee-CCeEEEEEec--CC-------CCceEEEECCCCCchhhH
Q 021424 5 EHKFIKV-QGLNLHIAEA--GA-------DAHVVVFLHGFPEIWYSW 41 (312)
Q Consensus 5 ~~~~~~~-~g~~i~~~~~--g~-------~~~~vlllHG~~~~~~~~ 41 (312)
+...++. ||+-+..... +. .+|||+|.||+.+++..|
T Consensus 13 E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 13 EEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGG
T ss_pred EEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHH
Confidence 3344444 8887665321 21 368999999999999998
No 196
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=96.18 E-value=0.06 Score=49.81 Aligned_cols=119 Identities=18% Similarity=0.180 Sum_probs=80.8
Q ss_pred cceeee-CCeEEEEEecC----CC-CceEEEECCCCCchh--hHHHHHHHHhhCCcEEEeeCCCCCCCCCCC--CCCCCC
Q 021424 6 HKFIKV-QGLNLHIAEAG----AD-AHVVVFLHGFPEIWY--SWRHQMVGVATAGFRAIAPDCRGYGLSDPP--AEPEKT 75 (312)
Q Consensus 6 ~~~~~~-~g~~i~~~~~g----~~-~~~vlllHG~~~~~~--~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~--~~~~~~ 75 (312)
+.+.++ ||.+|.|-..+ .+ +|++|+-=|...-+. .|..+...-+++|...+.-..||=|.=... ...-.-
T Consensus 396 Q~~atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~ 475 (648)
T COG1505 396 QFFATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKE 475 (648)
T ss_pred EEEEEcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhh
Confidence 444444 99999997764 13 677776666543332 455666666678888888999998854321 100011
Q ss_pred CHHHHHHHHHHHHHHh---CC---ceEEEEEcCccHHHHHHHHHhcccccceeEE
Q 021424 76 SFQDMVDDLLAILDHL---GL---AKVFLVAKDFGALTAYMFAIQHQERVSGVIT 124 (312)
Q Consensus 76 ~~~~~a~di~~~~~~l---~~---~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~ 124 (312)
+=+...+|..++.+.| |+ +++-+-|-|=||.+......++||.+.++|+
T Consensus 476 nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~ 530 (648)
T COG1505 476 NKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVC 530 (648)
T ss_pred cchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceee
Confidence 2233566777777766 34 3577899999999999999999999998884
No 197
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=96.14 E-value=0.0071 Score=55.68 Aligned_cols=66 Identities=17% Similarity=0.319 Sum_probs=50.8
Q ss_pred cccEEEEeeCCCCCCCCCCchhhhhccc------------------------hhccCC-----CceEEEeCCCCCCCCCc
Q 021424 245 KVPALLIMGDKDYFLKFPGIEDYIRSGK------------------------AKDLVP-----NLEIIHLPEGSHFVQEQ 295 (312)
Q Consensus 245 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~------------------------~~~~~p-----~~~~~~~~~~GH~~~~e 295 (312)
.++||+..|+.|.+++..+.+.++.... ..+... +.+++.+.+|||+++.+
T Consensus 364 gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~d 443 (462)
T PTZ00472 364 GVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPMD 443 (462)
T ss_pred CceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccChhh
Confidence 5899999999998887655544443211 111224 68889999999999999
Q ss_pred ChHHHHHHHHHHhhh
Q 021424 296 SPEEVNQLILTFLNK 310 (312)
Q Consensus 296 ~p~~~~~~i~~fl~~ 310 (312)
+|+...+.|..|+..
T Consensus 444 ~P~~~~~~i~~fl~~ 458 (462)
T PTZ00472 444 QPAVALTMINRFLRN 458 (462)
T ss_pred HHHHHHHHHHHHHcC
Confidence 999999999999964
No 198
>PLN00413 triacylglycerol lipase
Probab=96.12 E-value=0.017 Score=52.19 Aligned_cols=54 Identities=30% Similarity=0.511 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHhCCceEEEEEcCccHHHHHHHHHh---c-----ccccceeEEecCCCC
Q 021424 77 FQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQ---H-----QERVSGVITLGVPIL 130 (312)
Q Consensus 77 ~~~~a~di~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~---~-----p~~v~~lv~~~~~~~ 130 (312)
..+..+.+.++++...-.++++.|||+||.+|...|+. + ..++.++..-|+|-.
T Consensus 267 yy~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PRV 328 (479)
T PLN00413 267 YYTILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPRV 328 (479)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCCC
Confidence 33566778888888887899999999999999998853 1 224445555666543
No 199
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=96.01 E-value=0.019 Score=48.60 Aligned_cols=109 Identities=16% Similarity=0.166 Sum_probs=64.2
Q ss_pred EEEEEecCC----CCceEEEECC--CCCchhhHHHHHHHHhhCC----cEEEeeCCCCCCCCCCCCCCCCCC----HHHH
Q 021424 15 NLHIAEAGA----DAHVVVFLHG--FPEIWYSWRHQMVGVATAG----FRAIAPDCRGYGLSDPPAEPEKTS----FQDM 80 (312)
Q Consensus 15 ~i~~~~~g~----~~~~vlllHG--~~~~~~~~~~~~~~l~~~~----~~vi~~Dl~G~G~S~~~~~~~~~~----~~~~ 80 (312)
.+.|...|- +-|++++.|| |..+..-+. +++.|...+ --+|.+|.- ...+.. ...+. ...+
T Consensus 84 ~vv~lppgy~~~~k~pvl~~~DG~~~~~~g~i~~-~~dsli~~g~i~pai~vgid~~---d~~~R~-~~~~~n~~~~~~L 158 (299)
T COG2382 84 RVVYLPPGYNPLEKYPVLYLQDGQDWFRSGRIPR-ILDSLIAAGEIPPAILVGIDYI---DVKKRR-EELHCNEAYWRFL 158 (299)
T ss_pred EEEEeCCCCCccccccEEEEeccHHHHhcCChHH-HHHHHHHcCCCCCceEEecCCC---CHHHHH-HHhcccHHHHHHH
Confidence 355555552 4578999998 445555554 455555543 234444432 211110 01122 3334
Q ss_pred HHHHHHHHHHh-----CCceEEEEEcCccHHHHHHHHHhcccccceeEEecCC
Q 021424 81 VDDLLAILDHL-----GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 128 (312)
Q Consensus 81 a~di~~~~~~l-----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 128 (312)
++++.=++++- .-+.-.|.|-|+||.+++..|..||+++-.+++.++.
T Consensus 159 ~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps 211 (299)
T COG2382 159 AQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGS 211 (299)
T ss_pred HHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCc
Confidence 44444444442 1234669999999999999999999999998876543
No 200
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.99 E-value=0.01 Score=52.28 Aligned_cols=87 Identities=16% Similarity=0.201 Sum_probs=53.2
Q ss_pred CceEEEECCCCC-chhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHhCCceEEEEEcC
Q 021424 25 AHVVVFLHGFPE-IWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPP-AEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKD 102 (312)
Q Consensus 25 ~~~vlllHG~~~-~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~-~~~~~~~~~~~a~di~~~~~~l~~~~~~lvGhS 102 (312)
+.-|+++||.-+ +...|...+.....+ +-=..+..+|+=..-.. .++-.+==...++++.+.+....++++..||||
T Consensus 80 ~HLvVlthGi~~~~~~~~~~~~~~~~kk-~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si~kISfvghS 158 (405)
T KOG4372|consen 80 KHLVVLTHGLHGADMEYWKEKIEQMTKK-MPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSIEKISFVGHS 158 (405)
T ss_pred ceEEEeccccccccHHHHHHHHHhhhcC-CCcceEeeeccccchhhccccceeeecccHHHHhhhhhccccceeeeeeee
Confidence 357999999866 777888777766542 21113333333222221 111111112467777777777778999999999
Q ss_pred ccHHHHHHHH
Q 021424 103 FGALTAYMFA 112 (312)
Q Consensus 103 ~Gg~va~~~a 112 (312)
+||.++....
T Consensus 159 LGGLvar~AI 168 (405)
T KOG4372|consen 159 LGGLVARYAI 168 (405)
T ss_pred cCCeeeeEEE
Confidence 9999876543
No 201
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=95.84 E-value=0.039 Score=45.61 Aligned_cols=97 Identities=19% Similarity=0.233 Sum_probs=54.6
Q ss_pred eEEEECCC--CCchh-hHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCc----eEEEE
Q 021424 27 VVVFLHGF--PEIWY-SWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLA----KVFLV 99 (312)
Q Consensus 27 ~vlllHG~--~~~~~-~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~----~~~lv 99 (312)
+|-||=|. +.... +|+.+++.|.++||.||+.=..- |.- ... -+.--...+-..+.++.+.-+.. +++-|
T Consensus 19 vihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-tfD-H~~-~A~~~~~~f~~~~~~L~~~~~~~~~~lP~~~v 95 (250)
T PF07082_consen 19 VIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-TFD-HQA-IAREVWERFERCLRALQKRGGLDPAYLPVYGV 95 (250)
T ss_pred EEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-CCc-HHH-HHHHHHHHHHHHHHHHHHhcCCCcccCCeeee
Confidence 45566663 23232 57788999999999999976541 110 000 00001111111122222222222 46679
Q ss_pred EcCccHHHHHHHHHhcccccceeEEec
Q 021424 100 AKDFGALTAYMFAIQHQERVSGVITLG 126 (312)
Q Consensus 100 GhS~Gg~va~~~a~~~p~~v~~lv~~~ 126 (312)
|||+||.+-+.+.+.++..-++-+++.
T Consensus 96 GHSlGcklhlLi~s~~~~~r~gniliS 122 (250)
T PF07082_consen 96 GHSLGCKLHLLIGSLFDVERAGNILIS 122 (250)
T ss_pred ecccchHHHHHHhhhccCcccceEEEe
Confidence 999999999998888765556666653
No 202
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=95.83 E-value=0.11 Score=47.05 Aligned_cols=103 Identities=17% Similarity=0.264 Sum_probs=75.3
Q ss_pred CCceEEEECCC-CCc-------hhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCC-----CCCHHHHHHHHHHHHHH
Q 021424 24 DAHVVVFLHGF-PEI-------WYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPE-----KTSFQDMVDDLLAILDH 90 (312)
Q Consensus 24 ~~~~vlllHG~-~~~-------~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~-----~~~~~~~a~di~~~~~~ 90 (312)
+||.-|+|=|= +.+ ...|...++ +-|-.|+-+..|=||.|.+..+.+ .-+..+...|+.+||++
T Consensus 85 ~gPiFLmIGGEgp~~~~wv~~~~~~~~~~Ak---kfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~ 161 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPESDKWVGNENLTWLQWAK---KFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKA 161 (514)
T ss_pred CCceEEEEcCCCCCCCCccccCcchHHHHHH---HhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHH
Confidence 56777777773 333 113333332 236689999999999996543322 23677788999999999
Q ss_pred hCC-------ceEEEEEcCccHHHHHHHHHhcccccceeEEecCCC
Q 021424 91 LGL-------AKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPI 129 (312)
Q Consensus 91 l~~-------~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~ 129 (312)
+.. .+++.+|-|+-|.++..+=.++||.+.+-|...+|.
T Consensus 162 ~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv 207 (514)
T KOG2182|consen 162 MNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPV 207 (514)
T ss_pred HHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccce
Confidence 742 289999999999999999999999999988665553
No 203
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=95.71 E-value=0.022 Score=47.58 Aligned_cols=37 Identities=5% Similarity=0.098 Sum_probs=32.4
Q ss_pred CCceEEEEEcCccHHHHHHHHHhcccccceeEEecCC
Q 021424 92 GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 128 (312)
Q Consensus 92 ~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 128 (312)
.-++-.++|||+||.+++.....+|+.+....++++.
T Consensus 135 ~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPS 171 (264)
T COG2819 135 NSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPS 171 (264)
T ss_pred CcccceeeeecchhHHHHHHHhcCcchhceeeeecch
Confidence 4456889999999999999999999999999987653
No 204
>PLN02571 triacylglycerol lipase
Probab=95.62 E-value=0.019 Score=51.28 Aligned_cols=37 Identities=11% Similarity=0.274 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHhCCc--eEEEEEcCccHHHHHHHHHh
Q 021424 78 QDMVDDLLAILDHLGLA--KVFLVAKDFGALTAYMFAIQ 114 (312)
Q Consensus 78 ~~~a~di~~~~~~l~~~--~~~lvGhS~Gg~va~~~a~~ 114 (312)
.++.+++..+++...-+ ++++.|||+||.+|...|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 44667777777776544 58999999999999998875
No 205
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=95.61 E-value=0.062 Score=47.03 Aligned_cols=65 Identities=20% Similarity=0.336 Sum_probs=48.7
Q ss_pred cccEEEEeeCCCCCCCCCCchhhhhccc------------------hhccCCC-ceEEEeCCCCCCCCCcChHHHHHHHH
Q 021424 245 KVPALLIMGDKDYFLKFPGIEDYIRSGK------------------AKDLVPN-LEIIHLPEGSHFVQEQSPEEVNQLIL 305 (312)
Q Consensus 245 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~------------------~~~~~p~-~~~~~~~~~GH~~~~e~p~~~~~~i~ 305 (312)
.+++|+-.|+.|.+++..+.+.++.+.. ..+.+.+ .++..+.+|||+++ .+|+...+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 4899999999998887655544443221 1122233 88999999999997 59999999999
Q ss_pred HHhhh
Q 021424 306 TFLNK 310 (312)
Q Consensus 306 ~fl~~ 310 (312)
+||..
T Consensus 312 ~fi~~ 316 (319)
T PLN02213 312 RWISG 316 (319)
T ss_pred HHHcC
Confidence 99965
No 206
>PLN02454 triacylglycerol lipase
Probab=95.60 E-value=0.021 Score=50.96 Aligned_cols=34 Identities=21% Similarity=0.321 Sum_probs=24.6
Q ss_pred HHHHHHHHHHhCCce--EEEEEcCccHHHHHHHHHh
Q 021424 81 VDDLLAILDHLGLAK--VFLVAKDFGALTAYMFAIQ 114 (312)
Q Consensus 81 a~di~~~~~~l~~~~--~~lvGhS~Gg~va~~~a~~ 114 (312)
...|.++++...-++ +++.|||+||.+|+..|..
T Consensus 213 l~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 213 LAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 344444555444444 8999999999999999865
No 207
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=95.51 E-value=1.1 Score=42.25 Aligned_cols=102 Identities=16% Similarity=0.205 Sum_probs=70.6
Q ss_pred CCceEEEECCCCCchh--hHHHHHHHHhhCCcEEEeeCCCCCCCCCCC--CC----CCCCCHHHHHHHHHHHHHHhC--C
Q 021424 24 DAHVVVFLHGFPEIWY--SWRHQMVGVATAGFRAIAPDCRGYGLSDPP--AE----PEKTSFQDMVDDLLAILDHLG--L 93 (312)
Q Consensus 24 ~~~~vlllHG~~~~~~--~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~--~~----~~~~~~~~~a~di~~~~~~l~--~ 93 (312)
.+|.+|..=|--+.+. .|......|+++||-.-.---||=|.=... .. ....|+.++.+....++++-- -
T Consensus 447 ~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~ 526 (682)
T COG1770 447 SAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSP 526 (682)
T ss_pred CCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCc
Confidence 4677777777544332 344444567788875555567877754322 11 124588888877777776642 3
Q ss_pred ceEEEEEcCccHHHHHHHHHhcccccceeEEe
Q 021424 94 AKVFLVAKDFGALTAYMFAIQHQERVSGVITL 125 (312)
Q Consensus 94 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~ 125 (312)
+.+.+.|-|-||+++...|...|++++++|.-
T Consensus 527 ~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~ 558 (682)
T COG1770 527 DRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQ 558 (682)
T ss_pred cceEEeccCchhHHHHHHHhhChhhhhheeec
Confidence 46999999999999999999999999999953
No 208
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=95.46 E-value=0.062 Score=47.39 Aligned_cols=87 Identities=20% Similarity=0.284 Sum_probs=63.0
Q ss_pred eEEEECCCCCchhhH-HHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCceEEEEEc
Q 021424 27 VVVFLHGFPEIWYSW-RHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL----GLAKVFLVAK 101 (312)
Q Consensus 27 ~vlllHG~~~~~~~~-~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l----~~~~~~lvGh 101 (312)
.-||+-|=++ +++- +.+.+.|...|+.||.+|=.=|==|++ +.++.++|+.++++.. +..++.|+|.
T Consensus 262 ~av~~SGDGG-Wr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~r-------tPe~~a~Dl~r~i~~y~~~w~~~~~~liGy 333 (456)
T COG3946 262 VAVFYSGDGG-WRDLDKEVAEALQKQGVPVVGVDSLRYFWSER-------TPEQIAADLSRLIRFYARRWGAKRVLLIGY 333 (456)
T ss_pred EEEEEecCCc-hhhhhHHHHHHHHHCCCceeeeehhhhhhccC-------CHHHHHHHHHHHHHHHHHhhCcceEEEEee
Confidence 4455555444 3333 346778888999999999776665543 5678899999999887 5678999999
Q ss_pred CccHHHHHHHHHhcccccce
Q 021424 102 DFGALTAYMFAIQHQERVSG 121 (312)
Q Consensus 102 S~Gg~va~~~a~~~p~~v~~ 121 (312)
|+|+=|--....+-|...+.
T Consensus 334 SfGADvlP~~~n~L~~~~r~ 353 (456)
T COG3946 334 SFGADVLPFAYNRLPPATRQ 353 (456)
T ss_pred cccchhhHHHHHhCCHHHHH
Confidence 99998877666666654443
No 209
>PLN02408 phospholipase A1
Probab=95.25 E-value=0.031 Score=49.24 Aligned_cols=37 Identities=16% Similarity=0.287 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHhCCc--eEEEEEcCccHHHHHHHHHhcc
Q 021424 80 MVDDLLAILDHLGLA--KVFLVAKDFGALTAYMFAIQHQ 116 (312)
Q Consensus 80 ~a~di~~~~~~l~~~--~~~lvGhS~Gg~va~~~a~~~p 116 (312)
..++|..+++..+-+ ++++.|||+||.+|...|....
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl~ 222 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDIK 222 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHHH
Confidence 456677777776654 4899999999999999887643
No 210
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=95.21 E-value=0.046 Score=47.91 Aligned_cols=39 Identities=33% Similarity=0.549 Sum_probs=30.7
Q ss_pred CCceEEEEEcCccHHHHHHHHHhcccc-----cceeEEecCCCC
Q 021424 92 GLAKVFLVAKDFGALTAYMFAIQHQER-----VSGVITLGVPIL 130 (312)
Q Consensus 92 ~~~~~~lvGhS~Gg~va~~~a~~~p~~-----v~~lv~~~~~~~ 130 (312)
|..++.|||||+|+.+...+...-+++ |+.+++++.|..
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~ 261 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVP 261 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCC
Confidence 566799999999999999877655554 788888886543
No 211
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.12 E-value=0.063 Score=42.69 Aligned_cols=52 Identities=17% Similarity=0.170 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHhCCceEEEEEcCccHHHHHHHHHh------cccccceeEEecCCCC
Q 021424 79 DMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQ------HQERVSGVITLGVPIL 130 (312)
Q Consensus 79 ~~a~di~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~------~p~~v~~lv~~~~~~~ 130 (312)
.+.+.|.+....-.-.+++|+|+|.|+.|+..++.. ..++|.++|+.+.|..
T Consensus 66 ~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 66 NLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTT
T ss_pred HHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcc
Confidence 344455555555567899999999999999999876 4568899999876543
No 212
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=94.96 E-value=0.1 Score=42.53 Aligned_cols=77 Identities=19% Similarity=0.300 Sum_probs=50.9
Q ss_pred CceEEEECCCCCchhhHHHHHHHHhhCCcE-EEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEcCc
Q 021424 25 AHVVVFLHGFPEIWYSWRHQMVGVATAGFR-AIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDF 103 (312)
Q Consensus 25 ~~~vlllHG~~~~~~~~~~~~~~l~~~~~~-vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~~~~lvGhS~ 103 (312)
+..|||..||+.+...+.++. ++.++. ++++|.|-.-. +. |+ -+-+.++||++||
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~---~~~~~D~l~~yDYr~l~~--------d~-------~~------~~y~~i~lvAWSm 66 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLI---LPENYDVLICYDYRDLDF--------DF-------DL------SGYREIYLVAWSM 66 (213)
T ss_pred CeEEEEEecCCCChHHhhhcc---CCCCccEEEEecCccccc--------cc-------cc------ccCceEEEEEEeH
Confidence 468999999999988776542 133454 67788773221 11 11 1346899999999
Q ss_pred cHHHHHHHHHhcccccceeEEecC
Q 021424 104 GALTAYMFAIQHQERVSGVITLGV 127 (312)
Q Consensus 104 Gg~va~~~a~~~p~~v~~lv~~~~ 127 (312)
|=++|.++....| ++.-|.+++
T Consensus 67 GVw~A~~~l~~~~--~~~aiAING 88 (213)
T PF04301_consen 67 GVWAANRVLQGIP--FKRAIAING 88 (213)
T ss_pred HHHHHHHHhccCC--cceeEEEEC
Confidence 9999988865543 555555554
No 213
>PLN02934 triacylglycerol lipase
Probab=94.92 E-value=0.047 Score=49.84 Aligned_cols=37 Identities=19% Similarity=0.320 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHhCCceEEEEEcCccHHHHHHHHH
Q 021424 77 FQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAI 113 (312)
Q Consensus 77 ~~~~a~di~~~~~~l~~~~~~lvGhS~Gg~va~~~a~ 113 (312)
.....+.+.+++++..-.++++.|||+||.+|..+|+
T Consensus 304 y~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 304 YYAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 3456677788888887789999999999999999975
No 214
>PLN02310 triacylglycerol lipase
Probab=94.92 E-value=0.074 Score=47.48 Aligned_cols=36 Identities=8% Similarity=0.233 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHhC----CceEEEEEcCccHHHHHHHHHh
Q 021424 79 DMVDDLLAILDHLG----LAKVFLVAKDFGALTAYMFAIQ 114 (312)
Q Consensus 79 ~~a~di~~~~~~l~----~~~~~lvGhS~Gg~va~~~a~~ 114 (312)
+..+.|.++++.+. --++++.|||+||.+|...|..
T Consensus 190 qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 190 QVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 34566667776653 2368999999999999988854
No 215
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=94.90 E-value=0.051 Score=48.17 Aligned_cols=105 Identities=15% Similarity=0.177 Sum_probs=80.3
Q ss_pred EecCCCCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHhC---Cc
Q 021424 19 AEAGADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEP-EKTSFQDMVDDLLAILDHLG---LA 94 (312)
Q Consensus 19 ~~~g~~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~-~~~~~~~~a~di~~~~~~l~---~~ 94 (312)
.+.+.+.|.|+..-|...+..-.+.-...|++ -+-+.+..|=||.|.+.+.+ ..-++.+-|+|..++++++. -.
T Consensus 57 lHk~~drPtV~~T~GY~~~~~p~r~Ept~Lld--~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~ 134 (448)
T PF05576_consen 57 LHKDFDRPTVLYTEGYNVSTSPRRSEPTQLLD--GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPG 134 (448)
T ss_pred EEcCCCCCeEEEecCcccccCccccchhHhhc--cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccC
Confidence 33444568888888887655444333345554 47889999999999764433 24588999999999999985 35
Q ss_pred eEEEEEcCccHHHHHHHHHhcccccceeEEe
Q 021424 95 KVFLVAKDFGALTAYMFAIQHQERVSGVITL 125 (312)
Q Consensus 95 ~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~ 125 (312)
+++--|-|-||+.++.+=.-||+-|.+.|-=
T Consensus 135 kWISTG~SKGGmTa~y~rrFyP~DVD~tVaY 165 (448)
T PF05576_consen 135 KWISTGGSKGGMTAVYYRRFYPDDVDGTVAY 165 (448)
T ss_pred CceecCcCCCceeEEEEeeeCCCCCCeeeee
Confidence 7888999999999999999999999998853
No 216
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=94.64 E-value=0.3 Score=44.54 Aligned_cols=65 Identities=25% Similarity=0.379 Sum_probs=49.9
Q ss_pred ccEEEEeeCCCCCCCCCCchhhhhccc----------hh---------ccCCCceEEEeCCCCCCCCCcChHHHHHHHHH
Q 021424 246 VPALLIMGDKDYFLKFPGIEDYIRSGK----------AK---------DLVPNLEIIHLPEGSHFVQEQSPEEVNQLILT 306 (312)
Q Consensus 246 ~P~l~i~G~~D~~~~~~~~~~~~~~~~----------~~---------~~~p~~~~~~~~~~GH~~~~e~p~~~~~~i~~ 306 (312)
.+++|..|+.|-++|.-+.+.++++.. +. +.+.+.++..+.+|||++.+++|+.....+..
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~~ 443 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQR 443 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHHH
Confidence 799999999999988665555432211 11 12344667899999999999999999999999
Q ss_pred Hhhh
Q 021424 307 FLNK 310 (312)
Q Consensus 307 fl~~ 310 (312)
||..
T Consensus 444 fl~g 447 (454)
T KOG1282|consen 444 FLNG 447 (454)
T ss_pred HHcC
Confidence 9975
No 217
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=94.63 E-value=0.22 Score=49.96 Aligned_cols=94 Identities=18% Similarity=0.216 Sum_probs=65.4
Q ss_pred CCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-CceEEEEEcC
Q 021424 24 DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLG-LAKVFLVAKD 102 (312)
Q Consensus 24 ~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~-~~~~~lvGhS 102 (312)
.+||++|+|-.-+....+.. |..+ ...|-||.-....- ...+++..|.-...-++.+. ..++.++|.|
T Consensus 2122 e~~~~Ffv~pIEG~tt~l~~----la~r------le~PaYglQ~T~~v-P~dSies~A~~yirqirkvQP~GPYrl~GYS 2190 (2376)
T KOG1202|consen 2122 EEPPLFFVHPIEGFTTALES----LASR------LEIPAYGLQCTEAV-PLDSIESLAAYYIRQIRKVQPEGPYRLAGYS 2190 (2376)
T ss_pred cCCceEEEeccccchHHHHH----HHhh------cCCcchhhhccccC-CcchHHHHHHHHHHHHHhcCCCCCeeeeccc
Confidence 57899999977665554443 3331 23466775433222 24578888888888777775 5689999999
Q ss_pred ccHHHHHHHHHhcc--cccceeEEecCC
Q 021424 103 FGALTAYMFAIQHQ--ERVSGVITLGVP 128 (312)
Q Consensus 103 ~Gg~va~~~a~~~p--~~v~~lv~~~~~ 128 (312)
+|+.++..+|..-. +....+|+++..
T Consensus 2191 yG~~l~f~ma~~Lqe~~~~~~lillDGs 2218 (2376)
T KOG1202|consen 2191 YGACLAFEMASQLQEQQSPAPLILLDGS 2218 (2376)
T ss_pred hhHHHHHHHHHHHHhhcCCCcEEEecCc
Confidence 99999999987643 345668888753
No 218
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=94.42 E-value=0.1 Score=45.70 Aligned_cols=76 Identities=14% Similarity=0.100 Sum_probs=47.6
Q ss_pred cEEEeeCCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHHH-------hCCceEEEEEcCccHHHHHHHHHhc----c----
Q 021424 53 FRAIAPDCR-GYGLSDPPAEPEKTSFQDMVDDLLAILDH-------LGLAKVFLVAKDFGALTAYMFAIQH----Q---- 116 (312)
Q Consensus 53 ~~vi~~Dl~-G~G~S~~~~~~~~~~~~~~a~di~~~~~~-------l~~~~~~lvGhS~Gg~va~~~a~~~----p---- 116 (312)
.+++.+|.| |.|.|-........+=...|+|+..+++. +.-.+++|.|-|+||.-+-.+|..- .
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~ 81 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 81 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccC
Confidence 368999988 99999643221111212345666666665 2456799999999998766666532 1
Q ss_pred --cccceeEEecCC
Q 021424 117 --ERVSGVITLGVP 128 (312)
Q Consensus 117 --~~v~~lv~~~~~ 128 (312)
=.++++++-++.
T Consensus 82 ~~inLkGi~IGNg~ 95 (319)
T PLN02213 82 PPINLQGYMLGNPV 95 (319)
T ss_pred CceeeeEEEeCCCC
Confidence 145677755543
No 219
>PLN02324 triacylglycerol lipase
Probab=94.38 E-value=0.067 Score=47.81 Aligned_cols=35 Identities=14% Similarity=0.259 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHhCCc--eEEEEEcCccHHHHHHHHHh
Q 021424 80 MVDDLLAILDHLGLA--KVFLVAKDFGALTAYMFAIQ 114 (312)
Q Consensus 80 ~a~di~~~~~~l~~~--~~~lvGhS~Gg~va~~~a~~ 114 (312)
..++|..+++...-+ ++++.|||+||.+|...|..
T Consensus 199 Vl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 199 VQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 455577777776543 58899999999999998864
No 220
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=94.37 E-value=0.025 Score=51.41 Aligned_cols=65 Identities=26% Similarity=0.417 Sum_probs=45.6
Q ss_pred cccEEEEeeCCCCCCCCCCchhhhhccc--------------------hhccCCCceEEEeCCCCCCCCCcChHHHHHHH
Q 021424 245 KVPALLIMGDKDYFLKFPGIEDYIRSGK--------------------AKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLI 304 (312)
Q Consensus 245 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~--------------------~~~~~p~~~~~~~~~~GH~~~~e~p~~~~~~i 304 (312)
.++||+..|..|.+++..+.+.++.... ..+...+.+++.+.+|||+++.++|+...+.+
T Consensus 330 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~a~~m~ 409 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEAALQMF 409 (415)
T ss_dssp T-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHHH
T ss_pred cceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCHHHHHHHH
Confidence 4899999999999887444433332110 11234678899999999999999999999999
Q ss_pred HHHhh
Q 021424 305 LTFLN 309 (312)
Q Consensus 305 ~~fl~ 309 (312)
..||.
T Consensus 410 ~~fl~ 414 (415)
T PF00450_consen 410 RRFLK 414 (415)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 99986
No 221
>PLN02802 triacylglycerol lipase
Probab=94.26 E-value=0.075 Score=48.56 Aligned_cols=36 Identities=14% Similarity=0.250 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHhCCc--eEEEEEcCccHHHHHHHHHhc
Q 021424 80 MVDDLLAILDHLGLA--KVFLVAKDFGALTAYMFAIQH 115 (312)
Q Consensus 80 ~a~di~~~~~~l~~~--~~~lvGhS~Gg~va~~~a~~~ 115 (312)
..+++..+++...-+ ++++.|||+||.+|...|...
T Consensus 314 Vl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 314 VVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 445566677665433 688999999999999887654
No 222
>PLN02753 triacylglycerol lipase
Probab=94.16 E-value=0.08 Score=48.58 Aligned_cols=35 Identities=11% Similarity=0.274 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHhCC-----ceEEEEEcCccHHHHHHHHHh
Q 021424 80 MVDDLLAILDHLGL-----AKVFLVAKDFGALTAYMFAIQ 114 (312)
Q Consensus 80 ~a~di~~~~~~l~~-----~~~~lvGhS~Gg~va~~~a~~ 114 (312)
..+.|..+++..+. -++++.|||+||.+|...|..
T Consensus 293 Vl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 293 ILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 44556666666543 379999999999999999854
No 223
>PLN02719 triacylglycerol lipase
Probab=93.73 E-value=0.11 Score=47.62 Aligned_cols=35 Identities=11% Similarity=0.282 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhCC-----ceEEEEEcCccHHHHHHHHHh
Q 021424 80 MVDDLLAILDHLGL-----AKVFLVAKDFGALTAYMFAIQ 114 (312)
Q Consensus 80 ~a~di~~~~~~l~~-----~~~~lvGhS~Gg~va~~~a~~ 114 (312)
..+.|..+++...- -++.+.|||+||.+|...|..
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 44555666665542 279999999999999998854
No 224
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=93.72 E-value=0.059 Score=50.21 Aligned_cols=102 Identities=16% Similarity=0.165 Sum_probs=68.0
Q ss_pred CCceEEEECCCCC-chh-hHHHHHHHHhhCCcEEEeeCCCCCCCCCC--CCCCC----CCCHHHHHHHHHHHHHHh--CC
Q 021424 24 DAHVVVFLHGFPE-IWY-SWRHQMVGVATAGFRAIAPDCRGYGLSDP--PAEPE----KTSFQDMVDDLLAILDHL--GL 93 (312)
Q Consensus 24 ~~~~vlllHG~~~-~~~-~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~--~~~~~----~~~~~~~a~di~~~~~~l--~~ 93 (312)
+.|.+|..+|..+ +-. .|..--.-|+..|+-+...|.||=|.=.. ..++. ..+++++......+++.- .-
T Consensus 469 ~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~ 548 (712)
T KOG2237|consen 469 SKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQP 548 (712)
T ss_pred CCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCc
Confidence 4577777777543 222 45543334556788888889999874322 22221 346666655555555542 24
Q ss_pred ceEEEEEcCccHHHHHHHHHhcccccceeEEe
Q 021424 94 AKVFLVAKDFGALTAYMFAIQHQERVSGVITL 125 (312)
Q Consensus 94 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~ 125 (312)
++..+.|.|-||.++..++-.+|+.+.++|+-
T Consensus 549 ~kL~i~G~SaGGlLvga~iN~rPdLF~avia~ 580 (712)
T KOG2237|consen 549 SKLAIEGGSAGGLLVGACINQRPDLFGAVIAK 580 (712)
T ss_pred cceeEecccCccchhHHHhccCchHhhhhhhc
Confidence 56889999999999999999999999988853
No 225
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=93.69 E-value=0.16 Score=46.44 Aligned_cols=120 Identities=12% Similarity=0.118 Sum_probs=72.1
Q ss_pred cceeeeC---CeEEEEEecC---C--CCceEEEECCCCCchhhHHHHHHHHh-----------------------hCCcE
Q 021424 6 HKFIKVQ---GLNLHIAEAG---A--DAHVVVFLHGFPEIWYSWRHQMVGVA-----------------------TAGFR 54 (312)
Q Consensus 6 ~~~~~~~---g~~i~~~~~g---~--~~~~vlllHG~~~~~~~~~~~~~~l~-----------------------~~~~~ 54 (312)
..+++++ +.+++|.-.. + +.|.|+.+.|.|+++..+- ...... .+..+
T Consensus 39 sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g-~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~an 117 (433)
T PLN03016 39 TGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGG-IIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMAN 117 (433)
T ss_pred EEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHH-HHHhcCCceeeccccCCCCCceeeCCCchhhcCc
Confidence 3466663 4567765322 1 4689999999998776431 111111 12368
Q ss_pred EEeeC-CCCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHh-------CCceEEEEEcCccHHHHHHHHHh----c------
Q 021424 55 AIAPD-CRGYGLSDPPAEPE-KTSFQDMVDDLLAILDHL-------GLAKVFLVAKDFGALTAYMFAIQ----H------ 115 (312)
Q Consensus 55 vi~~D-l~G~G~S~~~~~~~-~~~~~~~a~di~~~~~~l-------~~~~~~lvGhS~Gg~va~~~a~~----~------ 115 (312)
++.+| ..|.|.|....... ..+. +.|+++.+|++.. .-.+++|.|.|+||..+-.+|.. .
T Consensus 118 llfiDqPvGtGfSy~~~~~~~~~d~-~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~ 196 (433)
T PLN03016 118 IIFLDQPVGSGFSYSKTPIDKTGDI-SEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEP 196 (433)
T ss_pred EEEecCCCCCCccCCCCCCCccCCH-HHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCC
Confidence 99999 88999996432211 1122 2345666655552 34679999999999766666543 2
Q ss_pred ccccceeEEecC
Q 021424 116 QERVSGVITLGV 127 (312)
Q Consensus 116 p~~v~~lv~~~~ 127 (312)
+-.++++++.++
T Consensus 197 ~inLkGi~iGNg 208 (433)
T PLN03016 197 PINLQGYMLGNP 208 (433)
T ss_pred cccceeeEecCC
Confidence 114667776554
No 226
>PLN03037 lipase class 3 family protein; Provisional
Probab=93.69 E-value=0.11 Score=47.61 Aligned_cols=35 Identities=9% Similarity=0.276 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHhC----CceEEEEEcCccHHHHHHHHHh
Q 021424 80 MVDDLLAILDHLG----LAKVFLVAKDFGALTAYMFAIQ 114 (312)
Q Consensus 80 ~a~di~~~~~~l~----~~~~~lvGhS~Gg~va~~~a~~ 114 (312)
..++|..+++.+. --++.+.|||+||.+|+..|..
T Consensus 300 Vl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 300 VMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 4566777776653 1268999999999999988854
No 227
>PLN02209 serine carboxypeptidase
Probab=93.45 E-value=0.18 Score=46.12 Aligned_cols=122 Identities=14% Similarity=0.133 Sum_probs=73.6
Q ss_pred ceeeeC---CeEEEEEecC----C-CCceEEEECCCCCchhhHHHHHH----------------HHh------hCCcEEE
Q 021424 7 KFIKVQ---GLNLHIAEAG----A-DAHVVVFLHGFPEIWYSWRHQMV----------------GVA------TAGFRAI 56 (312)
Q Consensus 7 ~~~~~~---g~~i~~~~~g----~-~~~~vlllHG~~~~~~~~~~~~~----------------~l~------~~~~~vi 56 (312)
.++.++ |.+++|.-.. + +.|.|+.+.|.|+++-.+-.+.+ .|. .+..+++
T Consensus 42 Gy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anll 121 (437)
T PLN02209 42 GYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANII 121 (437)
T ss_pred EEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEE
Confidence 456663 4566664322 1 46899999999988766532111 010 1235789
Q ss_pred eeC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------CCceEEEEEcCccHHHHHHHHHhc----------ccc
Q 021424 57 APD-CRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL-------GLAKVFLVAKDFGALTAYMFAIQH----------QER 118 (312)
Q Consensus 57 ~~D-l~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l-------~~~~~~lvGhS~Gg~va~~~a~~~----------p~~ 118 (312)
.+| ..|.|.|.........+-.+.|+|+.+|++.. .-.+++|.|.|+||.-+-.+|..- +=.
T Consensus 122 fiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~in 201 (437)
T PLN02209 122 FLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPIN 201 (437)
T ss_pred EecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCcee
Confidence 999 88999996432211222234567777766663 345799999999997666555432 114
Q ss_pred cceeEEecCC
Q 021424 119 VSGVITLGVP 128 (312)
Q Consensus 119 v~~lv~~~~~ 128 (312)
++++++.++.
T Consensus 202 l~Gi~igng~ 211 (437)
T PLN02209 202 LQGYVLGNPI 211 (437)
T ss_pred eeeEEecCcc
Confidence 5677765543
No 228
>PLN02761 lipase class 3 family protein
Probab=93.42 E-value=0.13 Score=47.22 Aligned_cols=36 Identities=14% Similarity=0.277 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHhC------CceEEEEEcCccHHHHHHHHHh
Q 021424 79 DMVDDLLAILDHLG------LAKVFLVAKDFGALTAYMFAIQ 114 (312)
Q Consensus 79 ~~a~di~~~~~~l~------~~~~~lvGhS~Gg~va~~~a~~ 114 (312)
++.+.|..+++..+ --++++.|||+||.+|...|..
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 34556666666652 1369999999999999988853
No 229
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=92.99 E-value=0.22 Score=45.46 Aligned_cols=106 Identities=15% Similarity=0.132 Sum_probs=66.9
Q ss_pred ceeeeC---CeEEEEEec----CC-CCceEEEECCCCCchhhHHHHHHHHhh------------------CCcEEEeeCC
Q 021424 7 KFIKVQ---GLNLHIAEA----GA-DAHVVVFLHGFPEIWYSWRHQMVGVAT------------------AGFRAIAPDC 60 (312)
Q Consensus 7 ~~~~~~---g~~i~~~~~----g~-~~~~vlllHG~~~~~~~~~~~~~~l~~------------------~~~~vi~~Dl 60 (312)
.++.++ |..++|.=. .+ +.|.||.|.|.|+.+-.- ..+..+.. +-.+++.+|.
T Consensus 47 GYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~ 125 (454)
T KOG1282|consen 47 GYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQ 125 (454)
T ss_pred ceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEEec
Confidence 577775 778888532 22 468999999998766432 34333321 1236788887
Q ss_pred C-CCCCCCCCCCC-CCCCHHHHHHHHHHHHHH-------hCCceEEEEEcCccHHHHHHHHH
Q 021424 61 R-GYGLSDPPAEP-EKTSFQDMVDDLLAILDH-------LGLAKVFLVAKDFGALTAYMFAI 113 (312)
Q Consensus 61 ~-G~G~S~~~~~~-~~~~~~~~a~di~~~~~~-------l~~~~~~lvGhS~Gg~va~~~a~ 113 (312)
| |-|.|-..... ...+-+..|+|+..|+.. ..-.+++|.|-|++|...-.+|.
T Consensus 126 PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~ 187 (454)
T KOG1282|consen 126 PVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQ 187 (454)
T ss_pred CCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHH
Confidence 6 88877543211 113445567777776655 24568999999999965555553
No 230
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=92.61 E-value=0.55 Score=44.45 Aligned_cols=102 Identities=17% Similarity=0.218 Sum_probs=56.0
Q ss_pred CceEEEECCCC---CchhhHH--HHHHHHhhCCcEEEeeCCC----CCCCCCCCCCCCCCCHHHHHHHHH---HHHHHhC
Q 021424 25 AHVVVFLHGFP---EIWYSWR--HQMVGVATAGFRAIAPDCR----GYGLSDPPAEPEKTSFQDMVDDLL---AILDHLG 92 (312)
Q Consensus 25 ~~~vlllHG~~---~~~~~~~--~~~~~l~~~~~~vi~~Dl~----G~G~S~~~~~~~~~~~~~~a~di~---~~~~~l~ 92 (312)
-|++|+|||.+ ++...+. .....+..+..=|+.+-.| |+........+.++.+.|+...+. +-|...|
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FG 191 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFG 191 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcC
Confidence 48999999864 3332231 1111222223334444443 444333222235666766654444 4444455
Q ss_pred --CceEEEEEcCccHHHHHHHHHhc--ccccceeEEec
Q 021424 93 --LAKVFLVAKDFGALTAYMFAIQH--QERVSGVITLG 126 (312)
Q Consensus 93 --~~~~~lvGhS~Gg~va~~~a~~~--p~~v~~lv~~~ 126 (312)
-+++.++|||-||..+..+...- ..++.+.|..+
T Consensus 192 Gdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~S 229 (545)
T KOG1516|consen 192 GDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMS 229 (545)
T ss_pred CCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhc
Confidence 45699999999999998776542 23566655543
No 231
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=92.37 E-value=0.24 Score=43.73 Aligned_cols=38 Identities=11% Similarity=0.225 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHhCCceEEEEEcCccHHHHHHHHHhc
Q 021424 78 QDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQH 115 (312)
Q Consensus 78 ~~~a~di~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~ 115 (312)
.++.+++..+++...--++.+-|||+||.+|...|..-
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~i 192 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALDL 192 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHHH
Confidence 57888888999999877899999999999999888653
No 232
>PLN02847 triacylglycerol lipase
Probab=92.30 E-value=0.27 Score=45.94 Aligned_cols=24 Identities=21% Similarity=0.184 Sum_probs=19.9
Q ss_pred hCCceEEEEEcCccHHHHHHHHHh
Q 021424 91 LGLAKVFLVAKDFGALTAYMFAIQ 114 (312)
Q Consensus 91 l~~~~~~lvGhS~Gg~va~~~a~~ 114 (312)
...=+++++|||+||.+|..++..
T Consensus 248 ~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 248 YPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CCCCeEEEeccChHHHHHHHHHHH
Confidence 334478999999999999998765
No 233
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=91.66 E-value=0.88 Score=39.13 Aligned_cols=96 Identities=16% Similarity=0.244 Sum_probs=62.6
Q ss_pred CCceEEEECCCCCchhhHHHHHHHHhh-------------CCcEEEeeCC-CCCCCCCCCCCC-CCCCHHHHHHHHHHHH
Q 021424 24 DAHVVVFLHGFPEIWYSWRHQMVGVAT-------------AGFRAIAPDC-RGYGLSDPPAEP-EKTSFQDMVDDLLAIL 88 (312)
Q Consensus 24 ~~~~vlllHG~~~~~~~~~~~~~~l~~-------------~~~~vi~~Dl-~G~G~S~~~~~~-~~~~~~~~a~di~~~~ 88 (312)
..|-.+.+.|.|+.+.+=....+.+.+ +.-.++.+|- .|.|.|--.... ..-+..+.|.|+.+++
T Consensus 30 ~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~ll 109 (414)
T KOG1283|consen 30 ERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKDADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVELL 109 (414)
T ss_pred CCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhhccEEEecCCCcCceeeecCcccccccHHHHHHHHHHHH
Confidence 356788899987654331122222221 1135666665 489998654321 1336778999999999
Q ss_pred HHh-------CCceEEEEEcCccHHHHHHHHHhccccc
Q 021424 89 DHL-------GLAKVFLVAKDFGALTAYMFAIQHQERV 119 (312)
Q Consensus 89 ~~l-------~~~~~~lvGhS~Gg~va~~~a~~~p~~v 119 (312)
+.+ .-.+++|+.-|+||-.|..+|...-+-|
T Consensus 110 k~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aI 147 (414)
T KOG1283|consen 110 KGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAI 147 (414)
T ss_pred HHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHH
Confidence 885 4568999999999999888776544433
No 234
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=91.19 E-value=0.52 Score=38.20 Aligned_cols=64 Identities=13% Similarity=0.104 Sum_probs=42.2
Q ss_pred CcEEEeeCCCCCCCCCCC----CCC---CCCCHHHHHHHHHHHHHHhCC-ceEEEEEcCccHHHHHHHHHhc
Q 021424 52 GFRAIAPDCRGYGLSDPP----AEP---EKTSFQDMVDDLLAILDHLGL-AKVFLVAKDFGALTAYMFAIQH 115 (312)
Q Consensus 52 ~~~vi~~Dl~G~G~S~~~----~~~---~~~~~~~~a~di~~~~~~l~~-~~~~lvGhS~Gg~va~~~a~~~ 115 (312)
..+|++|=.|=--..... .+. ....+.|..+....+|+..+- .+|+|+|||-|+.+..++...+
T Consensus 45 ~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 45 VCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred CCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 468888877643322221 000 123455666666677777754 4799999999999999998765
No 235
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=88.04 E-value=7.5 Score=27.54 Aligned_cols=85 Identities=16% Similarity=0.064 Sum_probs=55.0
Q ss_pred hhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEcCccH--HHHHHHHHhcc
Q 021424 39 YSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGA--LTAYMFAIQHQ 116 (312)
Q Consensus 39 ~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~~~~lvGhS~Gg--~va~~~a~~~p 116 (312)
..|..+.+.+...+|-.=.+.++..|.+-..--..... ..=.+-|..+++...-.+++|||=|--. -+-..+|.++|
T Consensus 11 nly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~-~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P 89 (100)
T PF09949_consen 11 NLYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAE-EHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFP 89 (100)
T ss_pred HHHHHHHHHHHhcCCCCCceEcccCCccccccccCCch-hHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCC
Confidence 34444444444446766677888887664321111111 2235568889999999999999988654 44556788999
Q ss_pred cccceeEE
Q 021424 117 ERVSGVIT 124 (312)
Q Consensus 117 ~~v~~lv~ 124 (312)
++|.++-+
T Consensus 90 ~~i~ai~I 97 (100)
T PF09949_consen 90 GRILAIYI 97 (100)
T ss_pred CCEEEEEE
Confidence 99998764
No 236
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=85.88 E-value=1.7 Score=33.95 Aligned_cols=112 Identities=14% Similarity=0.141 Sum_probs=61.9
Q ss_pred EEEEEecCCCCceEEEECCCCCchhhHHH--HHHHHh---hCC-cEEEeeCCCCCCCCCCCCCCCCCCHHHHHH----HH
Q 021424 15 NLHIAEAGADAHVVVFLHGFPEIWYSWRH--QMVGVA---TAG-FRAIAPDCRGYGLSDPPAEPEKTSFQDMVD----DL 84 (312)
Q Consensus 15 ~i~~~~~g~~~~~vlllHG~~~~~~~~~~--~~~~l~---~~~-~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~----di 84 (312)
.+.+..+|..|.|||+..--.+....|.. .+..|+ +.| ..++++| |--.-+.-.. .....+.++ --
T Consensus 16 dMel~ryGHaG~pVvvFpts~Grf~eyed~G~v~ala~fie~G~vQlft~~--gldsESf~a~--h~~~adr~~rH~Aye 91 (227)
T COG4947 16 DMELNRYGHAGIPVVVFPTSGGRFNEYEDFGMVDALASFIEEGLVQLFTLS--GLDSESFLAT--HKNAADRAERHRAYE 91 (227)
T ss_pred hhhhhhccCCCCcEEEEecCCCcchhhhhcccHHHHHHHHhcCcEEEEEec--ccchHhHhhh--cCCHHHHHHHHHHHH
Confidence 46677778656666666655555555432 233333 333 3455554 2222111111 111222222 12
Q ss_pred HHHHHHhCCceEEEEEcCccHHHHHHHHHhcccccceeEEecCCCC
Q 021424 85 LAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPIL 130 (312)
Q Consensus 85 ~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~~~ 130 (312)
.-++++.=......-|-||||+-|..+.-++|+.++++|.+...+.
T Consensus 92 rYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYd 137 (227)
T COG4947 92 RYVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYD 137 (227)
T ss_pred HHHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecceee
Confidence 2233332223455679999999999999999999999998765443
No 237
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=85.27 E-value=1.5 Score=37.08 Aligned_cols=39 Identities=21% Similarity=0.272 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHhCCceEEEEEcCccHHHHHHHHHhcc
Q 021424 78 QDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQ 116 (312)
Q Consensus 78 ~~~a~di~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p 116 (312)
.+-.+-+.++.+...-.++.+-|||+||.+|..+..++-
T Consensus 260 Sa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 260 SAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 344555555666667778999999999999999988773
No 238
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=85.27 E-value=1.5 Score=37.08 Aligned_cols=39 Identities=21% Similarity=0.272 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHhCCceEEEEEcCccHHHHHHHHHhcc
Q 021424 78 QDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQ 116 (312)
Q Consensus 78 ~~~a~di~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p 116 (312)
.+-.+-+.++.+...-.++.+-|||+||.+|..+..++-
T Consensus 260 Sa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 260 SAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 344555555666667778999999999999999988773
No 239
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=84.89 E-value=9.1 Score=31.66 Aligned_cols=79 Identities=16% Similarity=0.157 Sum_probs=44.5
Q ss_pred CcEEEeeCCCC-CCC-CCCCCCCCCCCHHHHHHHHHHHHHH-h-CCceEEEEEcCccHHHHHHHHHhccc------ccce
Q 021424 52 GFRAIAPDCRG-YGL-SDPPAEPEKTSFQDMVDDLLAILDH-L-GLAKVFLVAKDFGALTAYMFAIQHQE------RVSG 121 (312)
Q Consensus 52 ~~~vi~~Dl~G-~G~-S~~~~~~~~~~~~~~a~di~~~~~~-l-~~~~~~lvGhS~Gg~va~~~a~~~p~------~v~~ 121 (312)
|+.+..++.|. ++- +.......+.+..+=++.+.+.++. . .-++++++|+|.|+.|+...+.+.-+ ..-.
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~ 81 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLS 81 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceE
Confidence 45666677765 111 1111111223455545555555544 2 34679999999999999987765422 2345
Q ss_pred eEEecCCCC
Q 021424 122 VITLGVPIL 130 (312)
Q Consensus 122 lv~~~~~~~ 130 (312)
+|+++-+..
T Consensus 82 fVl~gnP~r 90 (225)
T PF08237_consen 82 FVLIGNPRR 90 (225)
T ss_pred EEEecCCCC
Confidence 777765543
No 240
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=83.27 E-value=2.4 Score=39.72 Aligned_cols=38 Identities=21% Similarity=0.380 Sum_probs=23.7
Q ss_pred CHHHHHHHHHHHHHHhCC---ceEEEEEcCccHHHHHHHHH
Q 021424 76 SFQDMVDDLLAILDHLGL---AKVFLVAKDFGALTAYMFAI 113 (312)
Q Consensus 76 ~~~~~a~di~~~~~~l~~---~~~~lvGhS~Gg~va~~~a~ 113 (312)
++..-+..+.+.+++-++ .++..|||||||.++=.+..
T Consensus 505 sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLl 545 (697)
T KOG2029|consen 505 SLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLL 545 (697)
T ss_pred HHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHH
Confidence 333344444444444443 35888999999988876654
No 241
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=78.76 E-value=15 Score=32.54 Aligned_cols=37 Identities=16% Similarity=0.299 Sum_probs=30.0
Q ss_pred HHHHHhCCceEEEEEcCccHHHHHHHHHhcccccceeE
Q 021424 86 AILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVI 123 (312)
Q Consensus 86 ~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 123 (312)
..++++.+..|.+-|-|--|+.++..|...| ||.++|
T Consensus 226 ~eL~q~~Ik~F~VTGaSKRgWttwLTAIaDp-rv~aIv 262 (507)
T COG4287 226 DELEQVEIKGFMVTGASKRGWTTWLTAIADP-RVFAIV 262 (507)
T ss_pred hhhhheeeeeEEEeccccchHHHHHHHhcCc-chhhhh
Confidence 3556667888889999999999999998887 677766
No 242
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=78.44 E-value=14 Score=29.86 Aligned_cols=62 Identities=18% Similarity=0.205 Sum_probs=46.0
Q ss_pred EEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEcCc----cHHHHHHHHHhc-ccccceeEEe
Q 021424 54 RAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDF----GALTAYMFAIQH-QERVSGVITL 125 (312)
Q Consensus 54 ~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~~~~lvGhS~----Gg~va~~~a~~~-p~~v~~lv~~ 125 (312)
+|+..|.++. ..|+...+++-+.+++++.+ -.++|+|+|. |..++-++|++- -..+..++-+
T Consensus 79 ~V~~~~~~~~---------~~~~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~~l 145 (202)
T cd01714 79 RAILVSDRAF---------AGADTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLGWPQITYVSKI 145 (202)
T ss_pred EEEEEecccc---------cCCChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhCCCccceEEEE
Confidence 6777665432 24678889999999999988 4788999998 889999999874 2245555543
No 243
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=75.51 E-value=19 Score=33.22 Aligned_cols=95 Identities=16% Similarity=0.204 Sum_probs=63.5
Q ss_pred EEEEecCC-CCceEEEECCCCCchhhHH--HHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC
Q 021424 16 LHIAEAGA-DAHVVVFLHGFPEIWYSWR--HQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLG 92 (312)
Q Consensus 16 i~~~~~g~-~~~~vlllHG~~~~~~~~~--~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~ 92 (312)
++|-.-|. ++|-.|..-|+-. .+-|. .++..|.. =-++.=|.|=-|.+=-.. .+.| =+...+-|..-+++||
T Consensus 279 ~yYFnPGD~KPPL~VYFSGyR~-aEGFEgy~MMk~Lg~--PfLL~~DpRleGGaFYlG-s~ey-E~~I~~~I~~~L~~Lg 353 (511)
T TIGR03712 279 IYYFNPGDFKPPLNVYFSGYRP-AEGFEGYFMMKRLGA--PFLLIGDPRLEGGAFYLG-SDEY-EQGIINVIQEKLDYLG 353 (511)
T ss_pred EEecCCcCCCCCeEEeeccCcc-cCcchhHHHHHhcCC--CeEEeeccccccceeeeC-cHHH-HHHHHHHHHHHHHHhC
Confidence 44556675 5677888889843 33332 24455533 246667888888764321 1223 3446777777888999
Q ss_pred Cce--EEEEEcCccHHHHHHHHHhc
Q 021424 93 LAK--VFLVAKDFGALTAYMFAIQH 115 (312)
Q Consensus 93 ~~~--~~lvGhS~Gg~va~~~a~~~ 115 (312)
.++ .+|-|-|||..=|+.|++..
T Consensus 354 F~~~qLILSGlSMGTfgAlYYga~l 378 (511)
T TIGR03712 354 FDHDQLILSGLSMGTFGALYYGAKL 378 (511)
T ss_pred CCHHHeeeccccccchhhhhhcccC
Confidence 764 88999999999999999875
No 244
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=75.44 E-value=42 Score=28.94 Aligned_cols=102 Identities=16% Similarity=0.162 Sum_probs=71.6
Q ss_pred ceEEEECCCCCchhhH-HHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEcCc-
Q 021424 26 HVVVFLHGFPEIWYSW-RHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDF- 103 (312)
Q Consensus 26 ~~vlllHG~~~~~~~~-~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~~~~lvGhS~- 103 (312)
|.||.+--..++..+. +...+.|+. ...|+.-|+.---.- |-....++++++.+-+.+++..+|-+ .|+++-.-
T Consensus 104 PkvLivapmsGH~aTLLR~TV~alLp-~~~vyitDW~dAr~V--p~~~G~FdldDYIdyvie~~~~~Gp~-~hv~aVCQP 179 (415)
T COG4553 104 PKVLIVAPMSGHYATLLRGTVEALLP-YHDVYITDWVDARMV--PLEAGHFDLDDYIDYVIEMINFLGPD-AHVMAVCQP 179 (415)
T ss_pred CeEEEEecccccHHHHHHHHHHHhcc-ccceeEeecccccee--ecccCCccHHHHHHHHHHHHHHhCCC-CcEEEEecC
Confidence 5677777777766654 556778876 467999898754432 22234789999999999999999975 55544332
Q ss_pred ----cHHHHHHHHHhcccccceeEEecCCCCC
Q 021424 104 ----GALTAYMFAIQHQERVSGVITLGVPILP 131 (312)
Q Consensus 104 ----Gg~va~~~a~~~p~~v~~lv~~~~~~~~ 131 (312)
=+.++++-+...|..-.+++++|+|...
T Consensus 180 ~vPvLAAisLM~~~~~p~~PssMtlmGgPIDa 211 (415)
T COG4553 180 TVPVLAAISLMEEDGDPNVPSSMTLMGGPIDA 211 (415)
T ss_pred CchHHHHHHHHHhcCCCCCCceeeeecCcccc
Confidence 2455555566678888999999887654
No 245
>PRK12467 peptide synthase; Provisional
Probab=75.35 E-value=13 Score=44.07 Aligned_cols=96 Identities=14% Similarity=0.011 Sum_probs=66.6
Q ss_pred ceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-CceEEEEEcCcc
Q 021424 26 HVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLG-LAKVFLVAKDFG 104 (312)
Q Consensus 26 ~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~-~~~~~lvGhS~G 104 (312)
+.|++.|...++...+..+...+. .+..++.+..++.-.-.+ ...++..++....+.+.... ..+.++.|+|+|
T Consensus 3693 ~~l~~~h~~~r~~~~~~~l~~~l~-~~~~~~~l~~~~~~~d~~----~~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g 3767 (3956)
T PRK12467 3693 PALFCRHEGLGTVFDYEPLAVILE-GDRHVLGLTCRHLLDDGW----QDTSLQAMAVQYADYILWQQAKGPYGLLGWSLG 3767 (3956)
T ss_pred cceeeechhhcchhhhHHHHHHhC-CCCcEEEEeccccccccC----CccchHHHHHHHHHHHHHhccCCCeeeeeeecc
Confidence 569999998887777776655554 357888887765533222 23467778888777776654 457999999999
Q ss_pred HHHHHHHHHhc---ccccceeEEec
Q 021424 105 ALTAYMFAIQH---QERVSGVITLG 126 (312)
Q Consensus 105 g~va~~~a~~~---p~~v~~lv~~~ 126 (312)
|.++..++..- -+.+.-+.+++
T Consensus 3768 ~~~a~~~~~~l~~~g~~~~~~~~~~ 3792 (3956)
T PRK12467 3768 GTLARLVAELLEREGESEAFLGLFD 3792 (3956)
T ss_pred hHHHHHHHHHHHHcCCceeEEEEEe
Confidence 99999887643 34455444554
No 246
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=75.25 E-value=6.3 Score=36.61 Aligned_cols=82 Identities=13% Similarity=0.171 Sum_probs=55.0
Q ss_pred HHHhhCCcEEEeeCCCCCCCCCC---CCCC-C--------CCCHHHHHHHHHHHHHHh---CCceEEEEEcCccHHHHHH
Q 021424 46 VGVATAGFRAIAPDCRGYGLSDP---PAEP-E--------KTSFQDMVDDLLAILDHL---GLAKVFLVAKDFGALTAYM 110 (312)
Q Consensus 46 ~~l~~~~~~vi~~Dl~G~G~S~~---~~~~-~--------~~~~~~~a~di~~~~~~l---~~~~~~lvGhS~Gg~va~~ 110 (312)
..+ ..||-+++=|- ||..+.. .... . ...++.++.--.++++.. ..++-+..|-|-||.=++.
T Consensus 54 ~~~-~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~ 131 (474)
T PF07519_consen 54 TAL-ARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLM 131 (474)
T ss_pred hhh-hcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHH
Confidence 344 46899999885 6766532 1111 0 113344444444455553 3556889999999999999
Q ss_pred HHHhcccccceeEEecCCC
Q 021424 111 FAIQHQERVSGVITLGVPI 129 (312)
Q Consensus 111 ~a~~~p~~v~~lv~~~~~~ 129 (312)
.|.+||+.+++|+..+++.
T Consensus 132 ~AQryP~dfDGIlAgaPA~ 150 (474)
T PF07519_consen 132 AAQRYPEDFDGILAGAPAI 150 (474)
T ss_pred HHHhChhhcCeEEeCCchH
Confidence 9999999999999765543
No 247
>PRK10279 hypothetical protein; Provisional
Probab=74.81 E-value=2.8 Score=36.30 Aligned_cols=37 Identities=14% Similarity=0.309 Sum_probs=28.6
Q ss_pred HHHHHHHhCCceEEEEEcCccHHHHHHHHHhcccccc
Q 021424 84 LLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVS 120 (312)
Q Consensus 84 i~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~ 120 (312)
+.+.+++.|+..-.++|.|+|+.++..||+...+.+.
T Consensus 23 VL~aL~E~gi~~d~i~GtS~GAlvga~yA~g~~~~l~ 59 (300)
T PRK10279 23 VINALKKVGIEIDIVAGCSIGSLVGAAYACDRLSALE 59 (300)
T ss_pred HHHHHHHcCCCcCEEEEEcHHHHHHHHHHcCChHHHH
Confidence 4455566788877889999999999999987654433
No 248
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=73.62 E-value=1.4 Score=35.58 Aligned_cols=45 Identities=22% Similarity=0.282 Sum_probs=32.2
Q ss_pred cccEEEEeeCCCCCCCCCCchhhhhccchhccCCCceEEEeCCCCCCCC
Q 021424 245 KVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQ 293 (312)
Q Consensus 245 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~GH~~~ 293 (312)
-.|+++++|+.|.+++ ....+. +++++.--+++++++++.+|...
T Consensus 166 ~Pp~~i~~g~~D~l~~--~~~~~~--~~L~~~gv~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 166 LPPTLIIHGEDDVLVD--DSLRFA--EKLKKAGVDVELHVYPGMPHGFF 210 (211)
T ss_dssp CHEEEEEEETTSTTHH--HHHHHH--HHHHHTT-EEEEEEETTEETTGG
T ss_pred CCCeeeeccccccchH--HHHHHH--HHHHHCCCCEEEEEECCCeEEee
Confidence 4589999999998764 233443 34555555689999999999764
No 249
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=73.31 E-value=4.1 Score=35.47 Aligned_cols=32 Identities=16% Similarity=0.368 Sum_probs=26.0
Q ss_pred HHHHHHHhCCceEEEEEcCccHHHHHHHHHhc
Q 021424 84 LLAILDHLGLAKVFLVAKDFGALTAYMFAIQH 115 (312)
Q Consensus 84 i~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~ 115 (312)
+.+.+++.|+..=.++|.|+|+.++..||+.+
T Consensus 33 vL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 33 VIKALEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 55566666887667789999999999999874
No 250
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=72.12 E-value=28 Score=29.89 Aligned_cols=77 Identities=18% Similarity=0.355 Sum_probs=41.7
Q ss_pred CceEEEEC--CCCCch--------------hhHHHHHHHHhhCCcE--EEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 021424 25 AHVVVFLH--GFPEIW--------------YSWRHQMVGVATAGFR--AIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLA 86 (312)
Q Consensus 25 ~~~vlllH--G~~~~~--------------~~~~~~~~~l~~~~~~--vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~ 86 (312)
+.++|++| |-|.+. ..+...++.+.+.|.. =|.+|. |+|.+.... .++ .+...+..
T Consensus 133 ~~~vVlmh~~g~p~~~~~~~~y~dv~~~v~~~l~~~i~~a~~~GI~~~~IilDP-GiGF~k~~~----~n~-~ll~~l~~ 206 (282)
T PRK11613 133 GLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEAAGIAKEKLLLDP-GFGFGKNLS----HNY-QLLARLAE 206 (282)
T ss_pred CCCEEEEcCCCCCCccccCCCcccHHHHHHHHHHHHHHHHHHcCCChhhEEEeC-CCCcCCCHH----HHH-HHHHHHHH
Confidence 45777778 444432 2334455566666774 677886 677543211 111 12333333
Q ss_pred HHHHhCCceEEEEEcCccHHHHHH
Q 021424 87 ILDHLGLAKVFLVAKDFGALTAYM 110 (312)
Q Consensus 87 ~~~~l~~~~~~lvGhS~Gg~va~~ 110 (312)
| +. +....++|+|-=..++..
T Consensus 207 l-~~--lg~Pilvg~SRKsfig~~ 227 (282)
T PRK11613 207 F-HH--FNLPLLVGMSRKSMIGQL 227 (282)
T ss_pred H-Hh--CCCCEEEEecccHHHHhh
Confidence 3 22 345779999977666533
No 251
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=71.50 E-value=3.3 Score=36.15 Aligned_cols=31 Identities=19% Similarity=0.282 Sum_probs=24.9
Q ss_pred HHHHHHHhCCceEEEEEcCccHHHHHHHHHh
Q 021424 84 LLAILDHLGLAKVFLVAKDFGALTAYMFAIQ 114 (312)
Q Consensus 84 i~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~ 114 (312)
+.++++..|+.+-.++|||+|=+.|+..|..
T Consensus 74 l~~~l~~~Gi~P~~v~GhSlGE~aA~~aaG~ 104 (318)
T PF00698_consen 74 LARLLRSWGIKPDAVIGHSLGEYAALVAAGA 104 (318)
T ss_dssp HHHHHHHTTHCESEEEESTTHHHHHHHHTTS
T ss_pred hhhhhcccccccceeeccchhhHHHHHHCCc
Confidence 4456788899999999999999888766543
No 252
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=70.41 E-value=5.3 Score=34.73 Aligned_cols=33 Identities=21% Similarity=0.376 Sum_probs=28.2
Q ss_pred HHHHHHHhCCceEEEEEcCccHHHHHHHHHhcc
Q 021424 84 LLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQ 116 (312)
Q Consensus 84 i~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p 116 (312)
+.+-+++.|+..-.+.|.|+|+.++..+|..+.
T Consensus 29 Vl~aL~e~gi~~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 29 VLKALEEAGIPIDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred HHHHHHHcCCCccEEEecCHHHHHHHHHHcCCC
Confidence 566677788988899999999999999998653
No 253
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=70.35 E-value=5.2 Score=34.46 Aligned_cols=31 Identities=19% Similarity=0.221 Sum_probs=24.9
Q ss_pred HHHHHHHhCCceEEEEEcCccHHHHHHHHHh
Q 021424 84 LLAILDHLGLAKVFLVAKDFGALTAYMFAIQ 114 (312)
Q Consensus 84 i~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~ 114 (312)
+.++++.+|+.+-.++|||+|-+.|..++..
T Consensus 72 ~~~~l~~~Gi~p~~~~GhSlGE~aA~~~ag~ 102 (298)
T smart00827 72 LARLWRSWGVRPDAVVGHSLGEIAAAYVAGV 102 (298)
T ss_pred HHHHHHHcCCcccEEEecCHHHHHHHHHhCC
Confidence 3345678899999999999999999877654
No 254
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=70.24 E-value=5.8 Score=31.78 Aligned_cols=66 Identities=18% Similarity=0.207 Sum_probs=44.3
Q ss_pred cc-cccEEEEeeCCCCCCCCCCchhhhhccchhccCCC--ceEEEeCCCCCCCCCcCh---HHHHHHHHHHhhhc
Q 021424 243 AV-KVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPN--LEIIHLPEGSHFVQEQSP---EEVNQLILTFLNKH 311 (312)
Q Consensus 243 ~i-~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~~GH~~~~e~p---~~~~~~i~~fl~~~ 311 (312)
+| +++.|-|-|+.|.+...-.... +..+-.-+|. -+.++.+++||+--+.-+ +++...|.+|+.++
T Consensus 131 aI~~taLlTVEGe~DDIsg~GQT~A---A~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 131 AIRRTALLTVEGERDDISGPGQTHA---AHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred HcccceeEEeecCcccCCcchHHHH---HHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 46 5677779999999986433322 1222222333 346677899998776554 78999999999764
No 255
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=68.99 E-value=41 Score=24.29 Aligned_cols=75 Identities=16% Similarity=0.168 Sum_probs=47.8
Q ss_pred eEEEECCCCCchhhHHHHHHHHhhC-CcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEcCccH
Q 021424 27 VVVFLHGFPEIWYSWRHQMVGVATA-GFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGA 105 (312)
Q Consensus 27 ~vlllHG~~~~~~~~~~~~~~l~~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~~~~lvGhS~Gg 105 (312)
.||.-|| .-+......+..+... .-.+.++|+. ...++.++.+.+.+.++.++-+.=.+|=.+++|
T Consensus 2 iii~sHG--~~A~g~~~~~~~i~G~~~~~i~~~~~~-----------~~~~~~~~~~~l~~~i~~~~~~~~vlil~Dl~g 68 (116)
T PF03610_consen 2 IIIASHG--SLAEGLLESAEMILGEDQDNIEAVDLY-----------PDESIEDFEEKLEEAIEELDEGDGVLILTDLGG 68 (116)
T ss_dssp EEEEEET--THHHHHHHHHHHHHTSTCSSEEEEEET-----------TTSCHHHHHHHHHHHHHHCCTTSEEEEEESSTT
T ss_pred EEEEECc--HHHHHHHHHHHHHcCCCcccEEEEECc-----------CCCCHHHHHHHHHHHHHhccCCCcEEEEeeCCC
Confidence 4788999 4444566677777766 3467777654 123788899999999998874444444445555
Q ss_pred HHHHHHHHh
Q 021424 106 LTAYMFAIQ 114 (312)
Q Consensus 106 ~va~~~a~~ 114 (312)
......+.+
T Consensus 69 gsp~n~a~~ 77 (116)
T PF03610_consen 69 GSPFNEAAR 77 (116)
T ss_dssp SHHHHHHHH
T ss_pred CccchHHHH
Confidence 444444433
No 256
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=68.92 E-value=15 Score=34.08 Aligned_cols=41 Identities=24% Similarity=0.354 Sum_probs=31.0
Q ss_pred hCCceEEEEEcCccHHHHHHHHHh-----cccccceeEEecCCCCC
Q 021424 91 LGLAKVFLVAKDFGALTAYMFAIQ-----HQERVSGVITLGVPILP 131 (312)
Q Consensus 91 l~~~~~~lvGhS~Gg~va~~~a~~-----~p~~v~~lv~~~~~~~~ 131 (312)
+|..++.|||.|+|+.+...+... .-..|..+++.|.|...
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~ 489 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPT 489 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccC
Confidence 478899999999999998866542 23357888888877543
No 257
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=68.59 E-value=6.9 Score=32.25 Aligned_cols=30 Identities=30% Similarity=0.321 Sum_probs=23.6
Q ss_pred HHHHHhCCceEEEEEcCccHHHHHHHHHhc
Q 021424 86 AILDHLGLAKVFLVAKDFGALTAYMFAIQH 115 (312)
Q Consensus 86 ~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~ 115 (312)
+.+++.++..-.++|.|.|+.+|..+|+..
T Consensus 20 ~aL~e~gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 20 AALLEMGLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHcCCCceEEEEeCHHHHHHHHHHcCC
Confidence 334445777777999999999999999755
No 258
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=68.05 E-value=11 Score=34.85 Aligned_cols=64 Identities=23% Similarity=0.211 Sum_probs=40.0
Q ss_pred cccEEEEeeCCCCCCCCCCchhhhhc-cchhccCCCceEEEeCCCCCCCCCcChHHHHHHHHHHhh
Q 021424 245 KVPALLIMGDKDYFLKFPGIEDYIRS-GKAKDLVPNLEIIHLPEGSHFVQEQSPEEVNQLILTFLN 309 (312)
Q Consensus 245 ~~P~l~i~G~~D~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~ 309 (312)
++.++...|-.|..++.-....-... ...+ ..++..+..+-++||++++++|+...+.+..|+.
T Consensus 425 ~Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~-s~~n~~~~r~y~aGHMvp~d~P~~~~~~~~~~~~ 489 (498)
T COG2939 425 KLKWLGASGYFDASTPFFWSRLTLEEMGGYK-SYRNLTFLRIYEAGHMVPYDRPESSLEMVNLWIN 489 (498)
T ss_pred cceEeeecchhhhcCCCcccccchhhccccc-ccCCceEEEEecCcceeecCChHHHHHHHHHHHh
Confidence 56677777777765543221110000 1122 2345566666669999999999999999998875
No 259
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=67.43 E-value=6 Score=31.04 Aligned_cols=34 Identities=18% Similarity=0.171 Sum_probs=26.0
Q ss_pred HHHHHHHhCCceEEEEEcCccHHHHHHHHHhccc
Q 021424 84 LLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQE 117 (312)
Q Consensus 84 i~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~ 117 (312)
+.+.+++.++..-.++|.|.|+.++..+|...+.
T Consensus 16 vl~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~~ 49 (172)
T cd07198 16 VAKALRERGPLIDIIAGTSAGAIVAALLASGRDL 49 (172)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCCH
Confidence 3344455577777789999999999999987543
No 260
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=67.11 E-value=6.6 Score=33.84 Aligned_cols=32 Identities=16% Similarity=-0.068 Sum_probs=25.4
Q ss_pred HHHHHHHhCCceEEEEEcCccHHHHHHHHHhc
Q 021424 84 LLAILDHLGLAKVFLVAKDFGALTAYMFAIQH 115 (312)
Q Consensus 84 i~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~ 115 (312)
+.+.++..|+.+..++|||+|=+.|..++...
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~aG~~ 97 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVAGVL 97 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHhCCC
Confidence 34456777999999999999999988876543
No 261
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=67.00 E-value=6.7 Score=33.42 Aligned_cols=32 Identities=16% Similarity=0.321 Sum_probs=25.5
Q ss_pred HHHHHHHhCCceEEEEEcCccHHHHHHHHHhc
Q 021424 84 LLAILDHLGLAKVFLVAKDFGALTAYMFAIQH 115 (312)
Q Consensus 84 i~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~ 115 (312)
+.+.+++.|+.-=.++|.|+|+.++..||...
T Consensus 28 VL~aLeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 28 ILQALEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 44555777887666789999999999999864
No 262
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=65.09 E-value=7.9 Score=30.90 Aligned_cols=30 Identities=27% Similarity=0.370 Sum_probs=23.4
Q ss_pred HHHHHhCCceEEEEEcCccHHHHHHHHHhc
Q 021424 86 AILDHLGLAKVFLVAKDFGALTAYMFAIQH 115 (312)
Q Consensus 86 ~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~ 115 (312)
+.+++.++..=.++|.|.||.+|..+|+..
T Consensus 19 ~~L~e~~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 19 KALEEAGILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHcCCCcceEEEECHHHHHHHHHHcCC
Confidence 334455776677899999999999999854
No 263
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=64.89 E-value=7.3 Score=33.35 Aligned_cols=30 Identities=23% Similarity=0.244 Sum_probs=23.9
Q ss_pred HHHHHhC-CceEEEEEcCccHHHHHHHHHhc
Q 021424 86 AILDHLG-LAKVFLVAKDFGALTAYMFAIQH 115 (312)
Q Consensus 86 ~~~~~l~-~~~~~lvGhS~Gg~va~~~a~~~ 115 (312)
+.++..| +.+-.++|||+|=+.|..+|...
T Consensus 74 ~~l~~~g~i~p~~v~GhS~GE~aAa~~aG~l 104 (290)
T TIGR00128 74 LKLKEQGGLKPDFAAGHSLGEYSALVAAGAL 104 (290)
T ss_pred HHHHHcCCCCCCEEeecCHHHHHHHHHhCCC
Confidence 3455666 99999999999999888877544
No 264
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=63.12 E-value=10 Score=33.17 Aligned_cols=32 Identities=22% Similarity=0.237 Sum_probs=21.6
Q ss_pred HHHHHHHhCCc---eEE-EEEcCccHHHHHHHHHhc
Q 021424 84 LLAILDHLGLA---KVF-LVAKDFGALTAYMFAIQH 115 (312)
Q Consensus 84 i~~~~~~l~~~---~~~-lvGhS~Gg~va~~~a~~~ 115 (312)
+.++-+.++.. .|. +.|.|.||.||..+|..+
T Consensus 18 L~~le~~~g~~i~~~fD~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 18 LIAIEKALGRPIRELFDWIAGTSTGGILALALLHGK 53 (312)
T ss_pred HHHHHHHhCCCchhhccEEEeeChHHHHHHHHHcCC
Confidence 33344445642 355 469999999999999754
No 265
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=62.18 E-value=20 Score=26.58 Aligned_cols=20 Identities=15% Similarity=0.268 Sum_probs=17.3
Q ss_pred CCCceEEEECCCCCchhhHH
Q 021424 23 ADAHVVVFLHGFPEIWYSWR 42 (312)
Q Consensus 23 ~~~~~vlllHG~~~~~~~~~ 42 (312)
+++|-|+-+|||+|...+|-
T Consensus 50 p~KpLVlSfHG~tGtGKn~v 69 (127)
T PF06309_consen 50 PRKPLVLSFHGWTGTGKNFV 69 (127)
T ss_pred CCCCEEEEeecCCCCcHHHH
Confidence 36788999999999999884
No 266
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=61.05 E-value=39 Score=26.31 Aligned_cols=76 Identities=14% Similarity=0.182 Sum_probs=50.8
Q ss_pred eEEEECCCCCchhhHHHHHHHHhhCCc-EEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEcCccH
Q 021424 27 VVVFLHGFPEIWYSWRHQMVGVATAGF-RAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGA 105 (312)
Q Consensus 27 ~vlllHG~~~~~~~~~~~~~~l~~~~~-~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~~~~lvGhS~Gg 105 (312)
-||..-||+..+....+++ +++.+ -++|+|.+..-. ++++..+ +.+.+|.+|||=
T Consensus 13 LIvyFaGwgtpps~v~HLi---lpeN~dl~lcYDY~dl~l--------dfDfsAy-------------~hirlvAwSMGV 68 (214)
T COG2830 13 LIVYFAGWGTPPSAVNHLI---LPENHDLLLCYDYQDLNL--------DFDFSAY-------------RHIRLVAWSMGV 68 (214)
T ss_pred EEEEEecCCCCHHHHhhcc---CCCCCcEEEEeehhhcCc--------ccchhhh-------------hhhhhhhhhHHH
Confidence 6777789988877666543 23445 478999875542 2233322 245689999999
Q ss_pred HHHHHHHHhcccccceeEEecCC
Q 021424 106 LTAYMFAIQHQERVSGVITLGVP 128 (312)
Q Consensus 106 ~va~~~a~~~p~~v~~lv~~~~~ 128 (312)
.||-++..-.+ +++-+.+++.
T Consensus 69 wvAeR~lqg~~--lksatAiNGT 89 (214)
T COG2830 69 WVAERVLQGIR--LKSATAINGT 89 (214)
T ss_pred HHHHHHHhhcc--ccceeeecCC
Confidence 99999988774 6666666543
No 267
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=60.65 E-value=17 Score=33.83 Aligned_cols=65 Identities=15% Similarity=0.174 Sum_probs=45.7
Q ss_pred ccEEEEeeCCCCCCCCCCchhhhhccc--hh----ccCCCceEEEeCCCCCCCCCc--ChHHHHHHHHHHhhh
Q 021424 246 VPALLIMGDKDYFLKFPGIEDYIRSGK--AK----DLVPNLEIIHLPEGSHFVQEQ--SPEEVNQLILTFLNK 310 (312)
Q Consensus 246 ~P~l~i~G~~D~~~~~~~~~~~~~~~~--~~----~~~p~~~~~~~~~~GH~~~~e--~p~~~~~~i~~fl~~ 310 (312)
--+++.+|-.|+++++.....|+++-. +. +.-.-.++..+|+.+||.--. .+-.....|.+|+++
T Consensus 354 GKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 354 GKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVEN 426 (474)
T ss_pred CeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhC
Confidence 346999999999998877777765321 11 111237899999999998654 344566778888875
No 268
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=59.42 E-value=19 Score=32.56 Aligned_cols=55 Identities=13% Similarity=0.186 Sum_probs=36.3
Q ss_pred ccEEEEeeCCCCCCCCCCchhhhhccchhccCCCceEEEeCCCCCCCCCc-----ChHHHHHHHHHHh
Q 021424 246 VPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQEQ-----SPEEVNQLILTFL 308 (312)
Q Consensus 246 ~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~GH~~~~e-----~p~~~~~~i~~fl 308 (312)
--+|+|+|++||+... .+ .+.+-..++.+.+.|++.|..... +.++....|.+|-
T Consensus 352 ~rmlFVYG~nDPW~A~----~f----~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~Wa 411 (448)
T PF05576_consen 352 PRMLFVYGENDPWSAE----PF----RLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWA 411 (448)
T ss_pred CeEEEEeCCCCCcccC----cc----ccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHc
Confidence 4589999999998632 11 112223577888999999976542 2345666677664
No 269
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=59.30 E-value=1.3e+02 Score=26.76 Aligned_cols=65 Identities=18% Similarity=0.259 Sum_probs=50.3
Q ss_pred ccccEEEEeeCCCCCCCCCCchhhhhccchhccCCCceEEEeCCCCCCCCC-cChHHHHHHHHHHhhh
Q 021424 244 VKVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQE-QSPEEVNQLILTFLNK 310 (312)
Q Consensus 244 i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~GH~~~~-e~p~~~~~~i~~fl~~ 310 (312)
.-.+.+.+++..|.+++...++.+.. ......-+++.+-+.++-|..|+ ..|..+.+...+|++.
T Consensus 224 ~~~~~ly~~s~~d~v~~~~~ie~f~~--~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~ 289 (350)
T KOG2521|consen 224 LPWNQLYLYSDNDDVLPADEIEKFIA--LRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRS 289 (350)
T ss_pred ccccceeecCCccccccHHHHHHHHH--HHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHh
Confidence 35678888999999998777777642 23334456777788899998877 6699999999999975
No 270
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=58.61 E-value=13 Score=29.26 Aligned_cols=31 Identities=23% Similarity=0.440 Sum_probs=23.7
Q ss_pred HHHHhCCceEEEEEcCccHHHHHHHHHhccc
Q 021424 87 ILDHLGLAKVFLVAKDFGALTAYMFAIQHQE 117 (312)
Q Consensus 87 ~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~ 117 (312)
.+++.++..=.++|.|.|+.+|..+|...+.
T Consensus 21 ~L~e~g~~~d~i~GtSaGAi~aa~~a~g~~~ 51 (175)
T cd07228 21 ALEEEGIEIDIIAGSSIGALVGALYAAGHLD 51 (175)
T ss_pred HHHHCCCCeeEEEEeCHHHHHHHHHHcCCCH
Confidence 3345577656678999999999999987643
No 271
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=58.05 E-value=12 Score=30.56 Aligned_cols=33 Identities=18% Similarity=0.303 Sum_probs=25.5
Q ss_pred HHHHHHHhCCceEEEEEcCccHHHHHHHHHhcc
Q 021424 84 LLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQ 116 (312)
Q Consensus 84 i~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p 116 (312)
+.+.+++.++.-=.++|.|.|+.+|..+|+..+
T Consensus 16 vl~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 334455567765667899999999999999875
No 272
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=56.24 E-value=12 Score=29.92 Aligned_cols=33 Identities=9% Similarity=0.189 Sum_probs=24.8
Q ss_pred eEEEEC---CCCCchhhHHHHHHHHhhCCcEEEeeC
Q 021424 27 VVVFLH---GFPEIWYSWRHQMVGVATAGFRAIAPD 59 (312)
Q Consensus 27 ~vlllH---G~~~~~~~~~~~~~~l~~~~~~vi~~D 59 (312)
.||++| +...+......+++.|.++||+++.++
T Consensus 153 ~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 153 DIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 588999 234455667778888888999988874
No 273
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=55.44 E-value=8 Score=35.32 Aligned_cols=37 Identities=14% Similarity=0.257 Sum_probs=28.1
Q ss_pred HHHHhCCceEEEEEcCccHHHHHHHHHhcccccceeE
Q 021424 87 ILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVI 123 (312)
Q Consensus 87 ~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 123 (312)
.+.+.++.+=++.|.|.|+.+|..+|+.-++++..+.
T Consensus 94 aL~E~gl~p~vIsGTSaGAivAal~as~~~eel~~~l 130 (421)
T cd07230 94 ALFEANLLPRIISGSSAGSIVAAILCTHTDEEIPELL 130 (421)
T ss_pred HHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHHHHHH
Confidence 3334466666799999999999999997777755543
No 274
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=53.01 E-value=87 Score=22.82 Aligned_cols=73 Identities=18% Similarity=0.155 Sum_probs=46.5
Q ss_pred eEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEcCc-cH
Q 021424 27 VVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDF-GA 105 (312)
Q Consensus 27 ~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~~~~lvGhS~-Gg 105 (312)
.||.-|| .-+......+..+....-.+.++|+.- ..+..++.+.+.++++.++-++=.+|=.++ ||
T Consensus 3 ili~sHG--~~A~gi~~~~~~i~G~~~~i~~~~~~~-----------~~~~~~~~~~i~~~i~~~~~~~~viil~Dl~GG 69 (122)
T cd00006 3 IIIATHG--GFASGLLNSAEMILGEQENVEAIDFPP-----------GESPDDLLEKIKAALAELDSGEGVLILTDLFGG 69 (122)
T ss_pred EEEEcCH--HHHHHHHHHHHHhcCCCCCeEEEEeCC-----------CCCHHHHHHHHHHHHHHhCCCCcEEEEEeCCCC
Confidence 4788899 334455566667665444677777652 236778888889988888654434444565 77
Q ss_pred HHHHHHH
Q 021424 106 LTAYMFA 112 (312)
Q Consensus 106 ~va~~~a 112 (312)
.......
T Consensus 70 Sp~n~~~ 76 (122)
T cd00006 70 SPNNAAA 76 (122)
T ss_pred CHHHHHH
Confidence 6655433
No 275
>PRK06824 translation initiation factor Sui1; Validated
Probab=52.68 E-value=90 Score=22.88 Aligned_cols=76 Identities=18% Similarity=0.107 Sum_probs=51.2
Q ss_pred CeEEEEEecCCCCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC
Q 021424 13 GLNLHIAEAGADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLG 92 (312)
Q Consensus 13 g~~i~~~~~g~~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~ 92 (312)
-++|++...|..+-.|-.|-|++....+...++..|..+ -|.|.|-+.. .---.=++.+.+.+++...|
T Consensus 42 ~vri~~~~kgr~gK~VTvI~Gl~~~~~dlk~l~K~LKkk---------~gcGGtvkd~--~IeiQGD~r~~v~~~L~~~G 110 (118)
T PRK06824 42 IVRVRRETKGRGGKTVTVITGVPLAEDALKELAKELKRR---------CGTGGTLKDG--VIEIQGDHVELLLAELLKRG 110 (118)
T ss_pred eEEEEEEEccCCCceEEEEeCCcCCHHHHHHHHHHHHHH---------hcCCceEecC--EEEEcCcHHHHHHHHHHHCC
Confidence 456777777766778999999998888888888888654 4677775421 11111146777888888888
Q ss_pred CceEEEEE
Q 021424 93 LAKVFLVA 100 (312)
Q Consensus 93 ~~~~~lvG 100 (312)
. ++-++|
T Consensus 111 ~-~~k~~g 117 (118)
T PRK06824 111 F-KAKKAG 117 (118)
T ss_pred C-eEeecc
Confidence 6 333443
No 276
>COG0218 Predicted GTPase [General function prediction only]
Probab=52.30 E-value=22 Score=28.73 Aligned_cols=15 Identities=33% Similarity=0.536 Sum_probs=12.3
Q ss_pred EEeeCCCCCCCCCCC
Q 021424 55 AIAPDCRGYGLSDPP 69 (312)
Q Consensus 55 vi~~Dl~G~G~S~~~ 69 (312)
+..+|+||||.-.-+
T Consensus 72 ~~lVDlPGYGyAkv~ 86 (200)
T COG0218 72 LRLVDLPGYGYAKVP 86 (200)
T ss_pred EEEEeCCCcccccCC
Confidence 678999999997643
No 277
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=52.07 E-value=21 Score=27.91 Aligned_cols=29 Identities=17% Similarity=0.309 Sum_probs=22.2
Q ss_pred HHHHhCCceEEEEEcCccHHHHHHHHHhc
Q 021424 87 ILDHLGLAKVFLVAKDFGALTAYMFAIQH 115 (312)
Q Consensus 87 ~~~~l~~~~~~lvGhS~Gg~va~~~a~~~ 115 (312)
.+++.++..=.++|.|.|+.+|..++...
T Consensus 21 ~L~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 21 ALEEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 33445665567899999999999999754
No 278
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=50.82 E-value=12 Score=31.32 Aligned_cols=24 Identities=17% Similarity=0.261 Sum_probs=19.0
Q ss_pred EEEEcCccHHHHHHHHHhcccccce
Q 021424 97 FLVAKDFGALTAYMFAIQHQERVSG 121 (312)
Q Consensus 97 ~lvGhS~Gg~va~~~a~~~p~~v~~ 121 (312)
.+.|.|.|+.+|..+|. .|+++..
T Consensus 34 ~i~GtSaGAl~aa~~a~-~~~~~~~ 57 (246)
T cd07222 34 RFAGASAGSLVAAVLLT-APEKIEE 57 (246)
T ss_pred EEEEECHHHHHHHHHhc-ChHHHHH
Confidence 68999999999999994 4555443
No 279
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=49.99 E-value=17 Score=34.27 Aligned_cols=33 Identities=15% Similarity=0.197 Sum_probs=26.9
Q ss_pred HHHHH-HHhCCceEEEEEcCccHHHHHHHHHhcc
Q 021424 84 LLAIL-DHLGLAKVFLVAKDFGALTAYMFAIQHQ 116 (312)
Q Consensus 84 i~~~~-~~l~~~~~~lvGhS~Gg~va~~~a~~~p 116 (312)
+.+++ +..|+.+-.++|||+|=+.|...|....
T Consensus 254 La~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvls 287 (538)
T TIGR02816 254 LTQLLCDEFAIKPDFALGYSKGEASMWASLGVWK 287 (538)
T ss_pred HHHHHHHhcCCCCCEEeecCHHHHHHHHHhCCCC
Confidence 34455 5789999999999999999998887663
No 280
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=49.94 E-value=11 Score=34.06 Aligned_cols=39 Identities=21% Similarity=0.262 Sum_probs=29.8
Q ss_pred HHHHHHhCCceEEEEEcCccHHHHHHHHHhcccccceeE
Q 021424 85 LAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVI 123 (312)
Q Consensus 85 ~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 123 (312)
...+.+.|+-+=++.|.|.|+.||..+|..-++.+..+.
T Consensus 102 ~kaL~e~gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~~l 140 (391)
T cd07229 102 VKALWLRGLLPRIITGTATGALIAALVGVHTDEELLRFL 140 (391)
T ss_pred HHHHHHcCCCCceEEEecHHHHHHHHHHcCCHHHHHHHH
Confidence 334445577777799999999999999997676666655
No 281
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=49.89 E-value=22 Score=29.29 Aligned_cols=33 Identities=12% Similarity=0.224 Sum_probs=26.5
Q ss_pred eEEEECCC-CCchhhHHHHHHHHhhCCcEEEeeC
Q 021424 27 VVVFLHGF-PEIWYSWRHQMVGVATAGFRAIAPD 59 (312)
Q Consensus 27 ~vlllHG~-~~~~~~~~~~~~~l~~~~~~vi~~D 59 (312)
.||++|.. ..+......+++.|.++||+++.++
T Consensus 188 ~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 188 AILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred cEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 68899964 5566677888889989999998875
No 282
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=46.85 E-value=12 Score=34.11 Aligned_cols=41 Identities=17% Similarity=0.257 Sum_probs=30.0
Q ss_pred HHHHHHHHHhCCceEEEEEcCccHHHHHHHHHhcccccceeE
Q 021424 82 DDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVI 123 (312)
Q Consensus 82 ~di~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv 123 (312)
.-+.++. +.++.+=+++|.|.|+.+|..+|..-++++..++
T Consensus 84 GVlkaL~-e~gllp~iI~GtSAGAivaalla~~t~~el~~~~ 124 (407)
T cd07232 84 GVVKALL-DADLLPNVISGTSGGSLVAALLCTRTDEELKQLL 124 (407)
T ss_pred HHHHHHH-hCCCCCCEEEEECHHHHHHHHHHcCCHHHHHHHH
Confidence 3333333 3467676799999999999999997777776654
No 283
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=45.90 E-value=29 Score=29.60 Aligned_cols=33 Identities=9% Similarity=0.117 Sum_probs=26.8
Q ss_pred eEEEECCCCCchhhHHHHHHHHhhCCcEEEeeC
Q 021424 27 VVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPD 59 (312)
Q Consensus 27 ~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~D 59 (312)
.||++|-...+......++..|.++||+++.++
T Consensus 232 ~IILmHd~~~T~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 232 AMVLMHPTASSTEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred cEEEEcCCccHHHHHHHHHHHHHHCCCEEEeHH
Confidence 588999766677777788888988999988875
No 284
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=45.09 E-value=36 Score=24.44 Aligned_cols=70 Identities=24% Similarity=0.254 Sum_probs=40.6
Q ss_pred EEEECCCCCchhhHHHHHHHHhhC-CcEEEeeCC--CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCceEEEEE
Q 021424 28 VVFLHGFPEIWYSWRHQMVGVATA-GFRAIAPDC--RGYGLSDPPAEPEKTSFQDMVDDLLAILDHL----GLAKVFLVA 100 (312)
Q Consensus 28 vlllHG~~~~~~~~~~~~~~l~~~-~~~vi~~Dl--~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l----~~~~~~lvG 100 (312)
|++|-|.+++..+- ++..|++. ++.++..|- +-.+..... .+.........+.+.+.++.+ ..+.+++-|
T Consensus 1 vI~I~G~~gsGKST--~a~~La~~~~~~~i~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ii~g 77 (121)
T PF13207_consen 1 VIIISGPPGSGKST--LAKELAERLGFPVISMDDLIREPGWIERD-DDEREYIDADIDLLDDILEQLQNKPDNDNWIIDG 77 (121)
T ss_dssp EEEEEESTTSSHHH--HHHHHHHHHTCEEEEEHHHHCCGTHCHGC-TTCCHHHHHHHHHHHHHHHHHHETTT--EEEEEC
T ss_pred CEEEECCCCCCHHH--HHHHHHHHHCCeEEEecceEEeccccccC-cchhhHHHHHHHHHHHHHHhhhccCCCCeEEEeC
Confidence 68899999887764 44566664 799999998 655655332 111111334455555666665 233355555
No 285
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=44.84 E-value=2e+02 Score=24.58 Aligned_cols=62 Identities=23% Similarity=0.196 Sum_probs=38.3
Q ss_pred EEEeeCCCCCCC--------CCCC-----CCCCCCCHHHHHHHHHHHH-HHh-CCceEEEEEcCccHHHHHHHHHhc
Q 021424 54 RAIAPDCRGYGL--------SDPP-----AEPEKTSFQDMVDDLLAIL-DHL-GLAKVFLVAKDFGALTAYMFAIQH 115 (312)
Q Consensus 54 ~vi~~Dl~G~G~--------S~~~-----~~~~~~~~~~~a~di~~~~-~~l-~~~~~~lvGhS~Gg~va~~~a~~~ 115 (312)
+.+++-.+|-|. +... ...-.+.+.+-+.+...++ +.. ..+++.++|.|.|++.|-.+|..-
T Consensus 37 ~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 37 RQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred ceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHHHH
Confidence 566677888887 1111 0011234555444444433 443 467899999999999999998643
No 286
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=44.83 E-value=15 Score=31.96 Aligned_cols=36 Identities=14% Similarity=0.234 Sum_probs=26.7
Q ss_pred HHHHhCCceEEEEEcCccHHHHHHHHHhccccccee
Q 021424 87 ILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGV 122 (312)
Q Consensus 87 ~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 122 (312)
.+.+.|+-+-++.|-|.|+.+|..++..-++.+..+
T Consensus 89 aL~e~gl~p~~i~GsSaGAivaa~~~~~t~~El~~~ 124 (323)
T cd07231 89 TLVEHQLLPRVIAGSSVGSIVCAIIATRTDEELQSF 124 (323)
T ss_pred HHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 333447777779999999999999998655555443
No 287
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=44.65 E-value=87 Score=27.24 Aligned_cols=83 Identities=13% Similarity=0.065 Sum_probs=50.9
Q ss_pred HHHHHhhCCcEEEeeCCCCCCCCCCCCC--CCCC--CHHHHHHHHHHHHHHhCCceEE------EEEcCc----------
Q 021424 44 QMVGVATAGFRAIAPDCRGYGLSDPPAE--PEKT--SFQDMVDDLLAILDHLGLAKVF------LVAKDF---------- 103 (312)
Q Consensus 44 ~~~~l~~~~~~vi~~Dl~G~G~S~~~~~--~~~~--~~~~~a~di~~~~~~l~~~~~~------lvGhS~---------- 103 (312)
....|++.||.|+.+|-.--|..+.... ...+ ++.+ .+-+.+++++..++.++ .||-|+
T Consensus 16 tv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D-~~~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~NN 94 (329)
T COG1087 16 TVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLD-RALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNN 94 (329)
T ss_pred HHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEecccc-HHHHHHHHHhcCCCEEEECccccccchhhhCHHHHHhhc
Confidence 4456778899999999998887654322 1111 2222 22466777777776533 577775
Q ss_pred -cHHHHHHHHHhcccccceeEEecCC
Q 021424 104 -GALTAYMFAIQHQERVSGVITLGVP 128 (312)
Q Consensus 104 -Gg~va~~~a~~~p~~v~~lv~~~~~ 128 (312)
+|++.+.=|.+. ..|+.+|+.+++
T Consensus 95 v~gTl~Ll~am~~-~gv~~~vFSStA 119 (329)
T COG1087 95 VVGTLNLIEAMLQ-TGVKKFIFSSTA 119 (329)
T ss_pred hHhHHHHHHHHHH-hCCCEEEEecch
Confidence 445544444333 259999987654
No 288
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=44.51 E-value=36 Score=32.27 Aligned_cols=104 Identities=13% Similarity=0.122 Sum_probs=56.3
Q ss_pred CCceEEEECCCCCchhhHHHHHH------HHh-hC-CcEEEeeC----CCCCCCCCCCCCCC-CCCHHHHHHHHHHHHHH
Q 021424 24 DAHVVVFLHGFPEIWYSWRHQMV------GVA-TA-GFRAIAPD----CRGYGLSDPPAEPE-KTSFQDMVDDLLAILDH 90 (312)
Q Consensus 24 ~~~~vlllHG~~~~~~~~~~~~~------~l~-~~-~~~vi~~D----l~G~G~S~~~~~~~-~~~~~~~a~di~~~~~~ 90 (312)
++-||-+.=|++-+..+...+.+ .|+ .+ |=.|+.-. .+=||.-+.+...+ ......+...+.+++.+
T Consensus 257 ~~ipLTLSiGvg~g~~~~~elg~vA~~~L~lAlgRGGDQVvIke~~~k~~fyGG~s~~~ekrTRvRaRvis~al~d~i~e 336 (655)
T COG3887 257 KNIPLTLSIGVGYGENNLIELGEVAQSNLDLALGRGGDQVVIKENNGKVRFYGGKSNPMEKRTRVRARVISTALSDIIKE 336 (655)
T ss_pred cCcceEEEEEeccCcccHHHHHHHHHHhHHHHhccCCceEEEEcCCCceeeeCCCcchhHHhHHHHHHHHHHHHHHHHhh
Confidence 34578888887765555443322 111 12 22333321 23345332232211 22333344445555544
Q ss_pred hCCceEEEEEc------CccHHHHHHHHHhcccccceeEEecCCCC
Q 021424 91 LGLAKVFLVAK------DFGALTAYMFAIQHQERVSGVITLGVPIL 130 (312)
Q Consensus 91 l~~~~~~lvGh------S~Gg~va~~~a~~~p~~v~~lv~~~~~~~ 130 (312)
.++|+++|| +.|+.+++..-+..-.+ .+.+.+++...
T Consensus 337 --~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~~~ 379 (655)
T COG3887 337 --SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPEDM 379 (655)
T ss_pred --cCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECcccc
Confidence 789999999 78999999876665555 66676765433
No 289
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=44.31 E-value=26 Score=21.01 Aligned_cols=27 Identities=15% Similarity=0.298 Sum_probs=23.7
Q ss_pred CCCHHHHHHHHHHHHHHhCCceEEEEE
Q 021424 74 KTSFQDMVDDLLAILDHLGLAKVFLVA 100 (312)
Q Consensus 74 ~~~~~~~a~di~~~~~~l~~~~~~lvG 100 (312)
.+..+.|..|+...|+++.+.++.++|
T Consensus 5 ~w~PqSWM~DLrS~I~~~~I~ql~ipG 31 (51)
T PF03490_consen 5 AWHPQSWMSDLRSSIGEMAITQLFIPG 31 (51)
T ss_pred ccCcHHHHHHHHHHHhcceeeeEEecc
Confidence 356778999999999999999999987
No 290
>PRK07451 translation initiation factor Sui1; Validated
Probab=44.26 E-value=1.2e+02 Score=22.05 Aligned_cols=75 Identities=20% Similarity=0.226 Sum_probs=48.9
Q ss_pred eEEEEEecCCCCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC
Q 021424 14 LNLHIAEAGADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGL 93 (312)
Q Consensus 14 ~~i~~~~~g~~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~ 93 (312)
++|.+...|..|-.|-.|-|++....+...++..|... .|+|.|-+.. .---.=++.+.+.+++...|.
T Consensus 40 irI~~~r~gR~GK~VTvV~Gl~~~~~dlk~LaK~LK~k---------~gcGGtvkd~--~IelQGD~r~~v~~~L~~~Gf 108 (115)
T PRK07451 40 LRVQATRSGRKGKTVTVITGFQHKPETLAKLLKQLKTQ---------CGSGGTVKDN--TIEIQGDHRQKILEILIKLGY 108 (115)
T ss_pred EEEEEEecCCCCCeEEEEeCCCCCHHHHHHHHHHHHHH---------hcCCceEcCC--EEEEcCcHHHHHHHHHHHCCC
Confidence 34454455655678999999998777777777777553 3688775432 111111467888899998887
Q ss_pred ceEEEEE
Q 021424 94 AKVFLVA 100 (312)
Q Consensus 94 ~~~~lvG 100 (312)
++-++|
T Consensus 109 -~~k~~g 114 (115)
T PRK07451 109 -KAKISG 114 (115)
T ss_pred -eEeecc
Confidence 454554
No 291
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=44.03 E-value=29 Score=28.85 Aligned_cols=33 Identities=24% Similarity=0.202 Sum_probs=24.2
Q ss_pred HHHHHHhCCc--eEEEEEcCccHHHHHHHHHhccc
Q 021424 85 LAILDHLGLA--KVFLVAKDFGALTAYMFAIQHQE 117 (312)
Q Consensus 85 ~~~~~~l~~~--~~~lvGhS~Gg~va~~~a~~~p~ 117 (312)
...+.+.++. .-.++|-|.|+.++..||+..+.
T Consensus 18 l~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~~ 52 (233)
T cd07224 18 LSLLIEAGVINETTPLAGASAGSLAAACSASGLSP 52 (233)
T ss_pred HHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCCH
Confidence 3344445665 34789999999999999987643
No 292
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=43.94 E-value=29 Score=29.33 Aligned_cols=33 Identities=18% Similarity=0.291 Sum_probs=24.2
Q ss_pred HHHHhCCceE-EEEEcCccHHHHHHHHHhccccc
Q 021424 87 ILDHLGLAKV-FLVAKDFGALTAYMFAIQHQERV 119 (312)
Q Consensus 87 ~~~~l~~~~~-~lvGhS~Gg~va~~~a~~~p~~v 119 (312)
.+.+.++.++ .++|.|.|+.+|..+++..+.+.
T Consensus 19 al~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~~~ 52 (266)
T cd07208 19 AFLEAGIRPFDLVIGVSAGALNAASYLSGQRGRA 52 (266)
T ss_pred HHHHcCCCCCCEEEEECHHHHhHHHHHhCCcchH
Confidence 3344456534 67899999999999998876543
No 293
>COG3933 Transcriptional antiterminator [Transcription]
Probab=43.67 E-value=1.9e+02 Score=26.57 Aligned_cols=75 Identities=21% Similarity=0.222 Sum_probs=56.1
Q ss_pred CceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEcCcc
Q 021424 25 AHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFG 104 (312)
Q Consensus 25 ~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~~~~lvGhS~G 104 (312)
-.+|+..||..-.+ +.-.++..|++. =-+.++||| -+.+..+..+.+.+-+++.+-.+=.++=-+||
T Consensus 109 v~vIiiAHG~sTAS-SmaevanrLL~~-~~~~aiDMP-----------Ldvsp~~vle~l~e~~k~~~~~~GlllLVDMG 175 (470)
T COG3933 109 VKVIIIAHGYSTAS-SMAEVANRLLGE-EIFIAIDMP-----------LDVSPSDVLEKLKEYLKERDYRSGLLLLVDMG 175 (470)
T ss_pred eeEEEEecCcchHH-HHHHHHHHHhhc-cceeeecCC-----------CcCCHHHHHHHHHHHHHhcCccCceEEEEecc
Confidence 34799999986422 334577788875 468899998 24578899999999999988777567778999
Q ss_pred HHHHHHHH
Q 021424 105 ALTAYMFA 112 (312)
Q Consensus 105 g~va~~~a 112 (312)
...+..=.
T Consensus 176 SL~~f~~~ 183 (470)
T COG3933 176 SLTSFGSI 183 (470)
T ss_pred hHHHHHHH
Confidence 98766443
No 294
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=42.99 E-value=30 Score=32.92 Aligned_cols=51 Identities=18% Similarity=0.331 Sum_probs=33.5
Q ss_pred cc-cccEEEEeeCCCCCCCC-CCchhhhhccchh-ccCCCceEEEeCCCCCCCC
Q 021424 243 AV-KVPALLIMGDKDYFLKF-PGIEDYIRSGKAK-DLVPNLEIIHLPEGSHFVQ 293 (312)
Q Consensus 243 ~i-~~P~l~i~G~~D~~~~~-~~~~~~~~~~~~~-~~~p~~~~~~~~~~GH~~~ 293 (312)
++ -+|+++++|+.|.++|. ...+.|....+.. -.....++..++++-|+=.
T Consensus 552 ~L~GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfDa 605 (690)
T PF10605_consen 552 NLHGKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFDA 605 (690)
T ss_pred CcCCCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeechh
Confidence 35 68999999999999986 3345554321111 1123467888899888753
No 295
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=41.60 E-value=35 Score=28.52 Aligned_cols=23 Identities=17% Similarity=0.157 Sum_probs=19.6
Q ss_pred EEEEcCccHHHHHHHHHhcc-ccc
Q 021424 97 FLVAKDFGALTAYMFAIQHQ-ERV 119 (312)
Q Consensus 97 ~lvGhS~Gg~va~~~a~~~p-~~v 119 (312)
.++|.|.|+.+|..+|+..+ +++
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~~~~~ 57 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVSMEEA 57 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCCHHHH
Confidence 78999999999999998764 543
No 296
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=40.38 E-value=59 Score=26.32 Aligned_cols=60 Identities=25% Similarity=0.431 Sum_probs=39.2
Q ss_pred cccEEEEeeCCCCCCCCCCchhhhhccchhccCC-CceEEEeCCCCCCCCCc-ChHHHHHHHHHHh
Q 021424 245 KVPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVP-NLEIIHLPEGSHFVQEQ-SPEEVNQLILTFL 308 (312)
Q Consensus 245 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~GH~~~~e-~p~~~~~~i~~fl 308 (312)
.+|..+.....|+........ ...+..+..+ ..+++.++ ++|+..+. +..++++.|.++|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~---~~~~W~~~~~~~~~~~~v~-G~H~~~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 168 KVPITLFYALDDPLVSMDRLE---EADRWWDYTSGDVEVHDVP-GDHFSMLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp SSEEEEEEECSSSSSSHHCGG---HHCHHHGCBSSSEEEEEES-SETTGHHSTTHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCccccchhhh---hHHHHHHhcCCCcEEEEEc-CCCcEecchHHHHHHHHHhccC
Confidence 467889999999875422111 1111233333 46788887 69998886 7788888888775
No 297
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=39.01 E-value=57 Score=29.25 Aligned_cols=37 Identities=22% Similarity=0.394 Sum_probs=29.0
Q ss_pred EEEECC-CCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCC
Q 021424 28 VVFLHG-FPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSD 67 (312)
Q Consensus 28 vlllHG-~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~ 67 (312)
|||||. ||+- |+.+++.|...|+.|..+-+.+.+..+
T Consensus 2 il~~~~~~p~~---~~~la~~L~~~G~~v~~~~~~~~~~~~ 39 (396)
T cd03818 2 ILFVHQNFPGQ---FRHLAPALAAQGHEVVFLTEPNAAPPP 39 (396)
T ss_pred EEEECCCCchh---HHHHHHHHHHCCCEEEEEecCCCCCCC
Confidence 789995 5653 778999999999998888777776544
No 298
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=38.53 E-value=22 Score=27.53 Aligned_cols=50 Identities=16% Similarity=0.130 Sum_probs=28.0
Q ss_pred eeCCCCCCCCCCC-CCCCCCCHHHHHHHH----HHHHHHhC----CceEEEEEcCccHH
Q 021424 57 APDCRGYGLSDPP-AEPEKTSFQDMVDDL----LAILDHLG----LAKVFLVAKDFGAL 106 (312)
Q Consensus 57 ~~Dl~G~G~S~~~-~~~~~~~~~~~a~di----~~~~~~l~----~~~~~lvGhS~Gg~ 106 (312)
.|=+.|||..... ..-..++..++|+-+ ..|-+.++ .+++.|||=|+++.
T Consensus 58 rw~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 58 RWQLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEEEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred eEEEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 3446799987221 112467889999988 44554443 34677777777665
No 299
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon. The holoenzyme of adenosylcobalamin-dependent ethanolamine ammonia-lyase (EutBC, IPR0092462 from INTERPRO, IPR010628 from INTERPRO), which is part of the ethanolamine utilization pathway [, , ], undergoes suicidal inactivation during catalysis as well as inactivation in the absence of substrate. The inactivation involves the irreversible cleavage of the Co-C bond of the coenzyme. The inactivated holoenzyme undergoes rapid and continuous reactivation in the presence of ATP, Mg2+, and free adenosylcobalamin in permeabilised cells (in situ), homogenate, and cell extracts of Escherichia coli. The EutA protein is essential for reactivation. It was demonstrated with purified recombinant EutA that both the suicidally inactivated and O2-inactivated holoethanolamine ammonia lyase underwent rapid reactivation in vitro by EutA in the presence of adenosylcobalamin, ATP, and Mg2+ []. The inactive enzyme-cyanocobalamin complex was also activated in situ and in vitro by EutA under the same conditions. Thus EutA is believed to be the only component of the reactivating factor for ethanolamine ammonia lyase. Reactivation and activation occur through the exchange of modified coenzyme for free intact adenosylcobalamin []. Bacteria that harbor the ethanolamine utilization pathway can use ethanolamine as a source of carbon and nitrogen. For more information on the ethanolamine utilization pathway, please see IPR009194 from INTERPRO, IPR012408 from INTERPRO.
Probab=38.18 E-value=3.4e+02 Score=25.33 Aligned_cols=115 Identities=11% Similarity=0.069 Sum_probs=71.9
Q ss_pred ceeeeCCeEEEEEecC-C-CCceEEEECCC-C-----CchhhHHHHHHHHhh-CCcEEEeeCCCCCCCCCCCCCCCCCCH
Q 021424 7 KFIKVQGLNLHIAEAG-A-DAHVVVFLHGF-P-----EIWYSWRHQMVGVAT-AGFRAIAPDCRGYGLSDPPAEPEKTSF 77 (312)
Q Consensus 7 ~~~~~~g~~i~~~~~g-~-~~~~vlllHG~-~-----~~~~~~~~~~~~l~~-~~~~vi~~Dl~G~G~S~~~~~~~~~~~ 77 (312)
+++++.|-+|+|...- | .+-|||-+.-- - .-...|+..+..+.. ....-+++=++|-+. ++...+
T Consensus 317 ~Tt~iSGSTI~~~~~~LPlkNiPVl~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~Alal~g~~~------~~f~~i 390 (473)
T PF06277_consen 317 HTTEISGSTITYTEDILPLKNIPVLKPSLEEEEESFEELAEAIREALEWFDLEGEDQPVALALPGKPN------PSFAEI 390 (473)
T ss_pred eEEEEeeeeEEecCCcCccCCCcEEeeccchhhcchHHHHHHHHHHHHhhcccCCCCcEEEEeCCCCC------CCHHHH
Confidence 6778889999997322 2 44566666532 1 111233332222211 234556666665442 234578
Q ss_pred HHHHHHHHHHHHHhCC---ceEEEEEcCccHHHHHHHHHhcccccceeEEecCC
Q 021424 78 QDMVDDLLAILDHLGL---AKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 128 (312)
Q Consensus 78 ~~~a~di~~~~~~l~~---~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 128 (312)
+.+|+.+.+.++.+.- --+.++-.+||-.+++.+..+-+.. ..+|++|..
T Consensus 391 q~lA~~i~~~~~~~~~~~~Plivv~e~D~aKvLGq~l~~~l~~~-~~licID~I 443 (473)
T PF06277_consen 391 QELAEAIAEGMAELINPDQPLIVVVEQDMAKVLGQTLQALLPKK-RPLICIDQI 443 (473)
T ss_pred HHHHHHHHHHHHhhccCCCCEEEEECchHHHHHHHHHHHhcCCC-CCEEEEeeE
Confidence 8899999999987632 2366789999999999999876633 578888754
No 300
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=37.59 E-value=42 Score=28.33 Aligned_cols=21 Identities=10% Similarity=0.512 Sum_probs=14.9
Q ss_pred HHHHHh-CCceEEEEEcCccHH
Q 021424 86 AILDHL-GLAKVFLVAKDFGAL 106 (312)
Q Consensus 86 ~~~~~l-~~~~~~lvGhS~Gg~ 106 (312)
.+.+.+ .++.++++|||+|..
T Consensus 226 ~~~~~l~~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 226 SFFESLSDIDEIIIYGHSLGEV 247 (270)
T ss_pred HHHhhhcCCCEEEEEeCCCchh
Confidence 333444 467899999999974
No 301
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=36.87 E-value=1.4e+02 Score=23.05 Aligned_cols=50 Identities=26% Similarity=0.218 Sum_probs=30.1
Q ss_pred CCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEcCccHHHHHHH
Q 021424 51 AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMF 111 (312)
Q Consensus 51 ~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~~~~lvGhS~Gg~va~~~ 111 (312)
.+-.|+++|.+|==. +-+++|+.+...- ..|-+=+.+||-|.|=.=++.-
T Consensus 66 ~~~~vi~Ld~~Gk~~----------sSe~fA~~l~~~~-~~G~~i~f~IGG~~Gl~~~~~~ 115 (155)
T COG1576 66 KGSYVVLLDIRGKAL----------SSEEFADFLERLR-DDGRDISFLIGGADGLSEAVKA 115 (155)
T ss_pred CCCeEEEEecCCCcC----------ChHHHHHHHHHHH-hcCCeEEEEEeCcccCCHHHHH
Confidence 467999999986433 3345555555443 3443346678888885444433
No 302
>COG3621 Patatin [General function prediction only]
Probab=36.67 E-value=53 Score=28.76 Aligned_cols=40 Identities=18% Similarity=0.305 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHhC----CceEEEE-EcCccHHHHHHHHHhcccc
Q 021424 79 DMVDDLLAILDHLG----LAKVFLV-AKDFGALTAYMFAIQHQER 118 (312)
Q Consensus 79 ~~a~di~~~~~~l~----~~~~~lv-GhS~Gg~va~~~a~~~p~~ 118 (312)
.+...+...+++.. ++.++++ |.|.||.+++.+|+-.+.+
T Consensus 22 ~i~lE~lr~ieqiqGkkl~e~FDl~~GTSiGgilal~La~~ks~~ 66 (394)
T COG3621 22 AILLEKLRIIEQIQGKKLCEYFDLIGGTSIGGILALGLALGKSPR 66 (394)
T ss_pred HHHHHHHHHHHHHhCCcceeeEeeecCccHHHHHHHHHhcCCCCc
Confidence 45556666777643 4567776 9999999999999876543
No 303
>PRK02399 hypothetical protein; Provisional
Probab=36.50 E-value=3.3e+02 Score=24.79 Aligned_cols=97 Identities=14% Similarity=0.115 Sum_probs=62.8
Q ss_pred EEECCCCCchhh-HHHHHHHHhhCCcEEEeeCCCCCCCCCCCC---------------------CCCCCCHHHHHHHHHH
Q 021424 29 VFLHGFPEIWYS-WRHQMVGVATAGFRAIAPDCRGYGLSDPPA---------------------EPEKTSFQDMVDDLLA 86 (312)
Q Consensus 29 lllHG~~~~~~~-~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~---------------------~~~~~~~~~~a~di~~ 86 (312)
|+|=|-.++... +..+.+.+...|..|+.+|.-..|....+. .++...++.+++-...
T Consensus 6 I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~~ 85 (406)
T PRK02399 6 IYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAAA 85 (406)
T ss_pred EEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHHH
Confidence 455576666553 334444555568999999984444211110 0112234556666666
Q ss_pred HHHHh----CCceEEEEEcCccHHHHHHHHHhcccccceeEEe
Q 021424 87 ILDHL----GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITL 125 (312)
Q Consensus 87 ~~~~l----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~ 125 (312)
+++.| .++-++-+|-|.|..++......-|=-+-+++..
T Consensus 86 ~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKlmVS 128 (406)
T PRK02399 86 FVRELYERGDVAGVIGLGGSGGTALATPAMRALPIGVPKLMVS 128 (406)
T ss_pred HHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeEEEE
Confidence 76653 4777888999999999999999899888887754
No 304
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=35.46 E-value=1.3e+02 Score=26.50 Aligned_cols=119 Identities=18% Similarity=0.169 Sum_probs=64.9
Q ss_pred cccceeeeCCeEEEEEecCC------CCceEEEECCCC--CchhhHHHHHHHHhh--CCcEEEeeCCCCCCCCCCC-CCC
Q 021424 4 IEHKFIKVQGLNLHIAEAGA------DAHVVVFLHGFP--EIWYSWRHQMVGVAT--AGFRAIAPDCRGYGLSDPP-AEP 72 (312)
Q Consensus 4 ~~~~~~~~~g~~i~~~~~g~------~~~~vlllHG~~--~~~~~~~~~~~~l~~--~~~~vi~~Dl~G~G~S~~~-~~~ 72 (312)
+.++|-+..+-.+||..+|+ ++.+=+|+||.+ ++... +-..|.+ ....|+..|.-+-=.-+.. .++
T Consensus 184 ~l~Qf~np~Np~~hy~ttg~EI~~q~~g~vDi~V~gaGTGGTitg---vGRylke~~~~~kVv~vdp~~S~~~~~~~~g~ 260 (362)
T KOG1252|consen 184 ILDQFHNPGNPLAHYETTGPEIWRQLDGKVDIFVAGAGTGGTITG---VGRYLKEQNPNIKVVGVDPQESIVLSGGKPGP 260 (362)
T ss_pred HHHHhcCCCCcccccccccHHHHHHhcCCCCEEEeccCCCceeec---hhHHHHHhCCCCEEEEeCCCcceeccCCCCCC
Confidence 34577777777799999886 577778899754 33322 2222322 3478888886543211110 110
Q ss_pred -------CCC------CHHHHH--------HHHHHHHHHhCCceEEEEEcCccHHHHHHH-HHhcccccceeEEe
Q 021424 73 -------EKT------SFQDMV--------DDLLAILDHLGLAKVFLVAKDFGALTAYMF-AIQHQERVSGVITL 125 (312)
Q Consensus 73 -------~~~------~~~~~a--------~di~~~~~~l~~~~~~lvGhS~Gg~va~~~-a~~~p~~v~~lv~~ 125 (312)
-.| .....+ ++.....+.|-.+.=.++|-|-|+.++..+ .++.|+.-..+|..
T Consensus 261 ~~~~I~GIGyg~~p~~ld~~~vd~~~~~~~d~A~~~Ar~La~eeGll~G~SSGan~~aAl~~a~~~en~~kliV~ 335 (362)
T KOG1252|consen 261 TFHKIQGIGYGFIPTTLDTKLVDEVLKVSSDEAIEMARRLALEEGLLVGISSGANVAAALKLAKRPENAGKLIVV 335 (362)
T ss_pred CccceeccccCcCccccchHHHHHHHHhCCHHHHHHHHHHHHhhCeeecccchHHHHHHHHHHhccccCCcEEEE
Confidence 001 111122 222223334444555699999999876655 45567666666543
No 305
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=35.20 E-value=72 Score=24.04 Aligned_cols=42 Identities=17% Similarity=0.094 Sum_probs=28.2
Q ss_pred eEEEECCCCCchhhH--HHHHHHHhhCCcEEEeeCCCCCCCCCC
Q 021424 27 VVVFLHGFPEIWYSW--RHQMVGVATAGFRAIAPDCRGYGLSDP 68 (312)
Q Consensus 27 ~vlllHG~~~~~~~~--~~~~~~l~~~~~~vi~~Dl~G~G~S~~ 68 (312)
|+|.+-|+.++..+. ..++..|...||+|.++=.-+||..+-
T Consensus 1 pvv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~~ 44 (140)
T PF03205_consen 1 PVVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFEI 44 (140)
T ss_dssp -EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTTC
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCccc
Confidence 578889987766654 356777888899988776677777654
No 306
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=34.69 E-value=3.2e+02 Score=24.90 Aligned_cols=71 Identities=17% Similarity=0.188 Sum_probs=40.0
Q ss_pred ceEEEECCCC----CchhhHHHHHHHHhhCCcEEEeeCCCCC---CCCCCCCCCCCCCHHHHHHHHHHHHHH--hCCceE
Q 021424 26 HVVVFLHGFP----EIWYSWRHQMVGVATAGFRAIAPDCRGY---GLSDPPAEPEKTSFQDMVDDLLAILDH--LGLAKV 96 (312)
Q Consensus 26 ~~vlllHG~~----~~~~~~~~~~~~l~~~~~~vi~~Dl~G~---G~S~~~~~~~~~~~~~~a~di~~~~~~--l~~~~~ 96 (312)
.||+++.-.. .+. -....+..|.+.|+.|+-++ +|+ |... .+.--+.++.++.+...+.. +...++
T Consensus 117 ~pvvi~Pamn~~m~~~p-~~~~Nl~~L~~~G~~ii~P~-~g~la~~~~g---~gr~~~~~~I~~~~~~~~~~~~l~gk~v 191 (399)
T PRK05579 117 APVLVAPAMNTQMWENP-ATQRNLATLRSRGVEIIGPA-SGRLACGDVG---PGRMAEPEEIVAAAERALSPKDLAGKRV 191 (399)
T ss_pred CCEEEEeCCChhHcCCH-HHHHHHHHHHHCCCEEECCC-CccccCCCcC---CCCCCCHHHHHHHHHHHhhhcccCCCEE
Confidence 3566666432 222 23456677888888887554 343 3332 22344677777777777643 334456
Q ss_pred EEEEc
Q 021424 97 FLVAK 101 (312)
Q Consensus 97 ~lvGh 101 (312)
.+-|-
T Consensus 192 lITgG 196 (399)
T PRK05579 192 LITAG 196 (399)
T ss_pred EEeCC
Confidence 66665
No 307
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=34.10 E-value=51 Score=27.62 Aligned_cols=23 Identities=17% Similarity=0.232 Sum_probs=19.0
Q ss_pred EEEcCccHHHHHHHHHhcc-cccc
Q 021424 98 LVAKDFGALTAYMFAIQHQ-ERVS 120 (312)
Q Consensus 98 lvGhS~Gg~va~~~a~~~p-~~v~ 120 (312)
+.|-|.|+.+|..+|...+ +++.
T Consensus 34 i~GtSAGAl~aa~~a~g~~~~~~~ 57 (245)
T cd07218 34 ISGASAGALAACCLLCDLPLGEMT 57 (245)
T ss_pred EEEEcHHHHHHHHHHhCCcHHHHH
Confidence 8999999999999998764 4433
No 308
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=33.66 E-value=54 Score=27.63 Aligned_cols=26 Identities=15% Similarity=0.215 Sum_probs=20.4
Q ss_pred EEEEEcCccHHHHHHHHHhcc-cccce
Q 021424 96 VFLVAKDFGALTAYMFAIQHQ-ERVSG 121 (312)
Q Consensus 96 ~~lvGhS~Gg~va~~~a~~~p-~~v~~ 121 (312)
-.++|.|.|+.++..||+..+ +++..
T Consensus 34 ~~i~GtSAGAl~aa~~asg~~~~~~~~ 60 (252)
T cd07221 34 RMFFGASAGALHCVTFLSGLPLDQILQ 60 (252)
T ss_pred CEEEEEcHHHHHHHHHHhCCCHHHHHH
Confidence 458999999999999998765 44443
No 309
>TIGR01158 SUI1_rel translation initation factor SUI1, putative, prokaryotic. This family of archaeal and bacterial proteins is homologous to the eukaryotic translation intiation factor SUI1 involved in directing the ribosome to the proper start site of translation by functioning in concert with eIF-2 and the initiator tRNA-Met.
Probab=33.63 E-value=1.7e+02 Score=20.68 Aligned_cols=70 Identities=13% Similarity=0.125 Sum_probs=43.9
Q ss_pred CeEEEEEecCCCCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC
Q 021424 13 GLNLHIAEAGADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLG 92 (312)
Q Consensus 13 g~~i~~~~~g~~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~ 92 (312)
-++|+....|..+-.|-.|.|+.........++..|... -|+|-|-... .-.-.=++.+.+.+++..+|
T Consensus 25 ~i~i~~e~rgr~gK~VTvV~Gl~~~~~~l~~l~k~LKk~---------~gcGgtvk~~--~IeiQGD~~~~v~~~L~~~G 93 (101)
T TIGR01158 25 VVRIQRETRGRKGKGVTIIEGLDLSDIDLKELAKELKSK---------CGCGGTVKDG--VIEIQGDHRDRVKDLLEKKG 93 (101)
T ss_pred eEEEEEEEecCCCCEEEEEeCCcCchhhHHHHHHHHHHH---------hcCCeeEeCC--EEEEeCcHHHHHHHHHHHcC
Confidence 356777777655678999999987666666666666542 2455554321 10001246788888888887
Q ss_pred C
Q 021424 93 L 93 (312)
Q Consensus 93 ~ 93 (312)
.
T Consensus 94 ~ 94 (101)
T TIGR01158 94 F 94 (101)
T ss_pred C
Confidence 6
No 310
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=33.53 E-value=1.4e+02 Score=26.63 Aligned_cols=65 Identities=15% Similarity=0.209 Sum_probs=43.6
Q ss_pred ceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEE
Q 021424 26 HVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLV 99 (312)
Q Consensus 26 ~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~~~~lv 99 (312)
.+|+.+-|.-+|+- .+..|.+.||.|+++-|.-+..+. ....+..+-..|..++.+.||+ +++++
T Consensus 5 kV~v~mSGGVDSSV----aA~lLk~QGyeViGl~m~~~~~~~----~~~C~s~~d~~da~~va~~LGI-p~~~v 69 (356)
T COG0482 5 KVLVGMSGGVDSSV----AAYLLKEQGYEVIGLFMKNWDEDG----GGGCCSEEDLRDAERVADQLGI-PLYVV 69 (356)
T ss_pred EEEEEccCCHHHHH----HHHHHHHcCCeEEEEEEEeeccCC----CCcCCchhHHHHHHHHHHHhCC-ceEEE
Confidence 46777778777753 233456679999999998777511 1123444567788889999988 44444
No 311
>PRK09019 translation initiation factor Sui1; Validated
Probab=32.96 E-value=1.9e+02 Score=20.86 Aligned_cols=76 Identities=17% Similarity=0.133 Sum_probs=50.2
Q ss_pred CeEEEEEecCCCCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC
Q 021424 13 GLNLHIAEAGADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLG 92 (312)
Q Consensus 13 g~~i~~~~~g~~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~ 92 (312)
-++|.....|..|-.|-.|-|++....+...++..|... .|+|.|-+.. .---.=++.+-+.+++...|
T Consensus 32 ~vri~~~r~gRkGK~VTiI~Gl~~~~~dlk~l~K~lKkk---------~gcGGtvk~~--~IelQGD~r~~v~~~L~~~G 100 (108)
T PRK09019 32 IVRIQRQTSGRKGKGVCLITGLDLDDAELKKLAAELKKK---------CGCGGAVKDG--VIEIQGDKRDLLKSLLEAKG 100 (108)
T ss_pred eEEEEEecCCCCCCeEEEEeCCcCCHHHHHHHHHHHHHH---------hcCCCeEEcC--EEEEcCcHHHHHHHHHHHCC
Confidence 445666666666778999999998777777777777653 3678775431 11011146677888888888
Q ss_pred CceEEEEE
Q 021424 93 LAKVFLVA 100 (312)
Q Consensus 93 ~~~~~lvG 100 (312)
. ++-++|
T Consensus 101 f-~~k~~g 107 (108)
T PRK09019 101 M-KVKLAG 107 (108)
T ss_pred C-eEEecc
Confidence 7 444544
No 312
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=32.80 E-value=55 Score=29.04 Aligned_cols=19 Identities=16% Similarity=0.132 Sum_probs=15.9
Q ss_pred EE-EEEcCccHHHHHHHHHh
Q 021424 96 VF-LVAKDFGALTAYMFAIQ 114 (312)
Q Consensus 96 ~~-lvGhS~Gg~va~~~a~~ 114 (312)
|. +.|.|.||.||..+|..
T Consensus 42 FDlIaGTStGgIIAa~la~g 61 (344)
T cd07217 42 FDFVGGTSTGSIIAACIALG 61 (344)
T ss_pred ccEEEEecHHHHHHHHHHcC
Confidence 44 46999999999999864
No 313
>TIGR02260 benz_CoA_red_B benzoyl-CoA reductase, bcr type, subunit B. This model describes B, or beta, subunit of the bcr type of benzoyl-CoA reductase, a 4-subunit enzyme. Many aromatic compounds are metabolized by way of benzoyl-CoA.
Probab=32.74 E-value=3.9e+02 Score=24.45 Aligned_cols=39 Identities=15% Similarity=0.136 Sum_probs=26.4
Q ss_pred CceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCC
Q 021424 25 AHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYG 64 (312)
Q Consensus 25 ~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G 64 (312)
+.+-|++||-|.... ...++..+-+.|..|++-|+..++
T Consensus 266 e~~Ril~~G~P~~~~-~~~~~k~~ee~Ga~VV~~~~~~~~ 304 (413)
T TIGR02260 266 EKYRLVVEGPPNWTN-FREFWKLFYDEGAVVVASSYTKVG 304 (413)
T ss_pred cceEEEEECCCcchh-HHHHHHHHHHCCCEEEEEeccccc
Confidence 357899999887653 222333344568999999888664
No 314
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=32.73 E-value=1.4e+02 Score=22.33 Aligned_cols=7 Identities=57% Similarity=1.326 Sum_probs=6.3
Q ss_pred eEEEECC
Q 021424 27 VVVFLHG 33 (312)
Q Consensus 27 ~vlllHG 33 (312)
.++|+||
T Consensus 59 ~viFvHG 65 (150)
T COG3727 59 CVIFVHG 65 (150)
T ss_pred EEEEEee
Confidence 6899999
No 315
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=32.21 E-value=48 Score=28.79 Aligned_cols=33 Identities=18% Similarity=0.253 Sum_probs=21.5
Q ss_pred HHHHHHHHHHhCCc---eEE-EEEcCccHHHHHHHHH
Q 021424 81 VDDLLAILDHLGLA---KVF-LVAKDFGALTAYMFAI 113 (312)
Q Consensus 81 a~di~~~~~~l~~~---~~~-lvGhS~Gg~va~~~a~ 113 (312)
+.-+.++.+.++.. .|. ++|.|.||.||..+|.
T Consensus 24 ~~vL~~Le~~~~~~i~~~fDli~GTStGgiiA~~la~ 60 (308)
T cd07211 24 LEILRKIEKLTGKPIHELFDYICGVSTGAILAFLLGL 60 (308)
T ss_pred HHHHHHHHHHhCCCchhhcCEEEecChhHHHHHHHhc
Confidence 33344444444432 234 5799999999999986
No 316
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=32.15 E-value=48 Score=28.73 Aligned_cols=38 Identities=16% Similarity=0.261 Sum_probs=27.0
Q ss_pred HHHHHHHHHHhCCceEEEEEcCccHHHHHHHHHhccccc
Q 021424 81 VDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERV 119 (312)
Q Consensus 81 a~di~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v 119 (312)
+.-+.++.+ .++..=++.|.|.|+.+|..++....+++
T Consensus 85 ~Gvl~aL~e-~~l~~~~i~GtSaGAi~aa~~~~~~~~El 122 (298)
T cd07206 85 LGVVKALWE-QDLLPRVISGSSAGAIVAALLGTHTDEEL 122 (298)
T ss_pred HHHHHHHHH-cCCCCCEEEEEcHHHHHHHHHHcCCcHHH
Confidence 444444443 45666679999999999999998755544
No 317
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=31.42 E-value=4.1e+02 Score=24.26 Aligned_cols=96 Identities=10% Similarity=0.039 Sum_probs=63.9
Q ss_pred EECCCCCchh-hHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCC---------------------CCCCCHHHHHHHHHHH
Q 021424 30 FLHGFPEIWY-SWRHQMVGVATAGFRAIAPDCRGYGLSDPPAE---------------------PEKTSFQDMVDDLLAI 87 (312)
Q Consensus 30 llHG~~~~~~-~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~---------------------~~~~~~~~~a~di~~~ 87 (312)
+|=|-.++.. .+..+.+.+.+.|.+++.+|.==.|.+..+.+ ++...++.+++-...+
T Consensus 5 ~iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga~~~ 84 (403)
T PF06792_consen 5 AIIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGAARF 84 (403)
T ss_pred EEEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHHHHH
Confidence 3445555544 34455566667889999999754444332211 1112345566666667
Q ss_pred HHHh----CCceEEEEEcCccHHHHHHHHHhcccccceeEEe
Q 021424 88 LDHL----GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITL 125 (312)
Q Consensus 88 ~~~l----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~ 125 (312)
+..| .++-++-+|-|.|..++......-|=-+-+++..
T Consensus 85 v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmVS 126 (403)
T PF06792_consen 85 VSDLYDEGKIDGVIGIGGSGGTALATAAMRALPIGFPKLMVS 126 (403)
T ss_pred HHHHHhcCCccEEEEecCCccHHHHHHHHHhCCCCCCeEEEE
Confidence 7766 3667888999999999999999989888887754
No 318
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=31.41 E-value=3.7e+02 Score=23.78 Aligned_cols=90 Identities=12% Similarity=0.066 Sum_probs=51.0
Q ss_pred ceEEEECC----CCCch-hhHHHHHHHHhh-CCcEEEeeCCCCCCCCCCCCC------------C--CCCCHHHHHHHHH
Q 021424 26 HVVVFLHG----FPEIW-YSWRHQMVGVAT-AGFRAIAPDCRGYGLSDPPAE------------P--EKTSFQDMVDDLL 85 (312)
Q Consensus 26 ~~vlllHG----~~~~~-~~~~~~~~~l~~-~~~~vi~~Dl~G~G~S~~~~~------------~--~~~~~~~~a~di~ 85 (312)
..|+|+-| |+... .+--.+...|.. .+-+++++--+|-|.-..... . -.+++...+....
T Consensus 32 ~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~AY 111 (423)
T COG3673 32 RLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIREAY 111 (423)
T ss_pred eEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHHHH
Confidence 46888888 33333 221122222222 467899999999996522100 0 0112222222223
Q ss_pred HH-HHHh-CCceEEEEEcCccHHHHHHHHHhc
Q 021424 86 AI-LDHL-GLAKVFLVAKDFGALTAYMFAIQH 115 (312)
Q Consensus 86 ~~-~~~l-~~~~~~lvGhS~Gg~va~~~a~~~ 115 (312)
.| ++.. ..+++++.|.|-|+.++-.+|..-
T Consensus 112 rFL~~~yepGD~Iy~FGFSRGAf~aRVlagmi 143 (423)
T COG3673 112 RFLIFNYEPGDEIYAFGFSRGAFSARVLAGMI 143 (423)
T ss_pred HHHHHhcCCCCeEEEeeccchhHHHHHHHHHH
Confidence 33 3333 468899999999999999988753
No 319
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=31.19 E-value=2.8e+02 Score=22.26 Aligned_cols=72 Identities=18% Similarity=0.254 Sum_probs=48.4
Q ss_pred HHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEcCccHHHHHHHHHhccc--ccce
Q 021424 44 QMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQE--RVSG 121 (312)
Q Consensus 44 ~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~--~v~~ 121 (312)
.++.+..+++.+|.+|=+|.... -....+++.++++...-..++||=-+..+.-.+.-+..+-+ .+.+
T Consensus 75 ~l~~~~~~~~D~vlIDT~Gr~~~----------d~~~~~el~~~~~~~~~~~~~LVlsa~~~~~~~~~~~~~~~~~~~~~ 144 (196)
T PF00448_consen 75 ALEKFRKKGYDLVLIDTAGRSPR----------DEELLEELKKLLEALNPDEVHLVLSATMGQEDLEQALAFYEAFGIDG 144 (196)
T ss_dssp HHHHHHHTTSSEEEEEE-SSSST----------HHHHHHHHHHHHHHHSSSEEEEEEEGGGGGHHHHHHHHHHHHSSTCE
T ss_pred HHHHHhhcCCCEEEEecCCcchh----------hHHHHHHHHHHhhhcCCccceEEEecccChHHHHHHHHHhhcccCce
Confidence 44455556799999999876632 23567788888888877788887665555555555444322 4788
Q ss_pred eEEe
Q 021424 122 VITL 125 (312)
Q Consensus 122 lv~~ 125 (312)
+|+.
T Consensus 145 lIlT 148 (196)
T PF00448_consen 145 LILT 148 (196)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8875
No 320
>COG0294 FolP Dihydropteroate synthase and related enzymes [Coenzyme metabolism]
Probab=30.32 E-value=1.2e+02 Score=25.88 Aligned_cols=50 Identities=18% Similarity=0.270 Sum_probs=30.9
Q ss_pred cEEEeeCCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEcCccHHHHHHHH
Q 021424 53 FRAIAPDCR-GYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFA 112 (312)
Q Consensus 53 ~~vi~~Dl~-G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~~~~lvGhS~Gg~va~~~a 112 (312)
...+..|.. |+|++.. .++ .+.+.+.++. ......|+|+|-+..++..+-
T Consensus 171 ~~~iilDpg~gf~k~~~------~n~-~ll~~~~~~~---~~g~piLvg~srK~~ig~~~~ 221 (274)
T COG0294 171 RELIILDPGFGFGKTPE------HNL-ELLARLSEFL---ELGFPILVGHSRKSFIGAILG 221 (274)
T ss_pred hhhEEecCCcCCCcccc------hhH-HHHHhHHHhh---cCCCcEEEecCCceehhhhcC
Confidence 347777866 6665531 122 2333333333 456688999999999988877
No 321
>TIGR02883 spore_cwlD N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect.
Probab=30.26 E-value=1.2e+02 Score=24.19 Aligned_cols=42 Identities=26% Similarity=0.192 Sum_probs=23.5
Q ss_pred EEeeCCCCCCCCCCCCCC-CCCC----HHHHHHHHHHHHHHhCCceEEE
Q 021424 55 AIAPDCRGYGLSDPPAEP-EKTS----FQDMVDDLLAILDHLGLAKVFL 98 (312)
Q Consensus 55 vi~~Dl~G~G~S~~~~~~-~~~~----~~~~a~di~~~~~~l~~~~~~l 98 (312)
+|++| ||||.++.-... .... -.+++.-+...++..|. ++++
T Consensus 2 ~I~iD-pGHGg~d~GA~~~~g~~E~~~~l~ia~~l~~~L~~~G~-~V~l 48 (189)
T TIGR02883 2 IIVID-PGHGGIDGGAVGKDGTLEKDITLEIALKLKDYLQEQGA-LVVM 48 (189)
T ss_pred EEEEe-CCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCC-EEEE
Confidence 56777 799988753221 1111 12356666667777775 4444
No 322
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=29.82 E-value=70 Score=24.50 Aligned_cols=19 Identities=21% Similarity=0.205 Sum_probs=16.3
Q ss_pred ceEEEEEcCccHHHHHHHH
Q 021424 94 AKVFLVAKDFGALTAYMFA 112 (312)
Q Consensus 94 ~~~~lvGhS~Gg~va~~~a 112 (312)
.--.+.|.|.|+.++..++
T Consensus 28 ~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 28 CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCCEEEEEcHHHHHHHHHh
Confidence 4456789999999999999
No 323
>TIGR01626 ytfJ_HI0045 conserved hypothetical protein YtfJ-family, TIGR01626. This model represents sequences from gamma proteobacteria that are related to the E. coli protein, YtfJ.
Probab=29.57 E-value=94 Score=24.81 Aligned_cols=90 Identities=10% Similarity=-0.030 Sum_probs=56.3
Q ss_pred eeeCCeEEEEEecCC---CCceE--EEECCCCCchhhHHHHHHHHhhCCcEE------EeeCCCCCCCCCCCCCCCCCCH
Q 021424 9 IKVQGLNLHIAEAGA---DAHVV--VFLHGFPEIWYSWRHQMVGVATAGFRA------IAPDCRGYGLSDPPAEPEKTSF 77 (312)
Q Consensus 9 ~~~~g~~i~~~~~g~---~~~~v--lllHG~~~~~~~~~~~~~~l~~~~~~v------i~~Dl~G~G~S~~~~~~~~~~~ 77 (312)
+.++|-++.|..+.. .|.+. -+.=||...++.-.+.+..|.++++.+ +.++.- + +.
T Consensus 40 ~~~~~~~~~y~~~~~~~l~GKV~lvn~~Aswc~~c~~e~P~l~~l~~~~~~~~~y~~t~~IN~d---------d----~~ 106 (184)
T TIGR01626 40 IVLSGKDTVYQPWGSAELAGKVRVVHHIAGRTSAKEXNASLIDAIKAAKFPPVKYQTTTIINAD---------D----AI 106 (184)
T ss_pred EEEcCCcccceeccHHHcCCCEEEEEEEecCCChhhccchHHHHHHHcCCCcccccceEEEECc---------c----ch
Confidence 334667788887764 34443 344489888888888999998888887 777411 0 23
Q ss_pred HHHHHHHHHHHHHhCCce-EEEEEcCccHHHHHHH
Q 021424 78 QDMVDDLLAILDHLGLAK-VFLVAKDFGALTAYMF 111 (312)
Q Consensus 78 ~~~a~di~~~~~~l~~~~-~~lvGhS~Gg~va~~~ 111 (312)
..-...+.++++..+.+- +..+..+-.|.++..+
T Consensus 107 ~~~~~fVk~fie~~~~~~P~~~vllD~~g~v~~~~ 141 (184)
T TIGR01626 107 VGTGMFVKSSAKKGKKENPWSQVVLDDKGAVKNAW 141 (184)
T ss_pred hhHHHHHHHHHHHhcccCCcceEEECCcchHHHhc
Confidence 334456777888877543 3334444455555544
No 324
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=29.31 E-value=1.9e+02 Score=27.73 Aligned_cols=95 Identities=16% Similarity=0.173 Sum_probs=53.1
Q ss_pred eEEEECCCC------CchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHH---HHHHHHHHHHhC--Cce
Q 021424 27 VVVFLHGFP------EIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDM---VDDLLAILDHLG--LAK 95 (312)
Q Consensus 27 ~vlllHG~~------~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~---a~di~~~~~~l~--~~~ 95 (312)
.|+--||.+ -+.+.|.+.+..- .+.-|+.+|+- =-|+.+-+.-+++. .-+++.=...|| .++
T Consensus 398 li~HcHGGGfVAqsSkSHE~YLr~Wa~a--L~cPiiSVdYS-----LAPEaPFPRaleEv~fAYcW~inn~allG~TgEr 470 (880)
T KOG4388|consen 398 LIVHCHGGGFVAQSSKSHEPYLRSWAQA--LGCPIISVDYS-----LAPEAPFPRALEEVFFAYCWAINNCALLGSTGER 470 (880)
T ss_pred EEEEecCCceeeeccccccHHHHHHHHH--hCCCeEEeeec-----cCCCCCCCcHHHHHHHHHHHHhcCHHHhCcccce
Confidence 466777764 3455566555443 36899999963 22333322222221 122333344466 468
Q ss_pred EEEEEcCccHHHHHHHH----HhcccccceeEEecCC
Q 021424 96 VFLVAKDFGALTAYMFA----IQHQERVSGVITLGVP 128 (312)
Q Consensus 96 ~~lvGhS~Gg~va~~~a----~~~p~~v~~lv~~~~~ 128 (312)
++++|-|-||.+...+| +..----++|+++=++
T Consensus 471 iv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~p 507 (880)
T KOG4388|consen 471 IVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPP 507 (880)
T ss_pred EEEeccCCCcceeehhHHHHHHhCCCCCCceEEecCh
Confidence 99999999996555444 4333223677766444
No 325
>TIGR01496 DHPS dihydropteroate synthase. This model represents dihydropteroate synthase, the enzyme that catalyzes the second to last step in folic acid biosynthesis. The gene is usually designated folP (folic acid biosynthsis) or sul (sulfanilamide resistance). This model represents one branch of the family of pterin-binding enzymes (pfam00809) and of a cluster of dihydropteroate synthase and related enzymes (COG0294). Other members of pfam00809 and COG0294 are represented by TIGR00284.
Probab=29.12 E-value=3e+02 Score=23.22 Aligned_cols=25 Identities=24% Similarity=0.345 Sum_probs=14.6
Q ss_pred HHHHHHHHhhCCc--EEEeeCCCCCCCC
Q 021424 41 WRHQMVGVATAGF--RAIAPDCRGYGLS 66 (312)
Q Consensus 41 ~~~~~~~l~~~~~--~vi~~Dl~G~G~S 66 (312)
+...++.+...|. .=+.+|. |.|..
T Consensus 150 ~~~~i~~~~~~Gi~~~~iilDP-g~gf~ 176 (257)
T TIGR01496 150 LEARAEELVAAGVAAERIILDP-GIGFG 176 (257)
T ss_pred HHHHHHHHHHcCCCHHHEEEEC-CCCcc
Confidence 3444555556666 3567777 77754
No 326
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=28.75 E-value=69 Score=26.95 Aligned_cols=21 Identities=24% Similarity=0.099 Sum_probs=18.1
Q ss_pred EEEEEcCccHHHHHHHHHhcc
Q 021424 96 VFLVAKDFGALTAYMFAIQHQ 116 (312)
Q Consensus 96 ~~lvGhS~Gg~va~~~a~~~p 116 (312)
-.+.|-|.|+.++..||+..+
T Consensus 38 ~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 38 RKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CeEEEEcHHHHHHHHHHcCCC
Confidence 457899999999999998764
No 327
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=28.71 E-value=46 Score=26.87 Aligned_cols=25 Identities=16% Similarity=0.163 Sum_probs=18.8
Q ss_pred ccccEEEEeeCCCCCCCCCCchhhh
Q 021424 244 VKVPALLIMGDKDYFLKFPGIEDYI 268 (312)
Q Consensus 244 i~~P~l~i~G~~D~~~~~~~~~~~~ 268 (312)
...|+++++|.+|.+++........
T Consensus 167 ~~p~~~i~hG~~D~vVp~~~~~~~~ 191 (212)
T TIGR01840 167 PTPIMSVVHGDADYTVLPGNADEIR 191 (212)
T ss_pred CCCeEEEEEcCCCceeCcchHHHHH
Confidence 3445789999999999877665543
No 328
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=28.44 E-value=63 Score=29.57 Aligned_cols=40 Identities=18% Similarity=0.327 Sum_probs=23.5
Q ss_pred ccEEEEeeCCCCCCCCCCchhhhhccchhccCCCceEEEeCCCCCCCCC
Q 021424 246 VPALLIMGDKDYFLKFPGIEDYIRSGKAKDLVPNLEIIHLPEGSHFVQE 294 (312)
Q Consensus 246 ~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~GH~~~~ 294 (312)
--++++.|+.||+.... + .....+.....+||+++|+.-+
T Consensus 377 tnviFtNG~~DPW~~lg-v--------~~~~~~~~~~~~I~g~~Hc~Dl 416 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALG-V--------TSDSSDSVPAIVIPGGAHCSDL 416 (434)
T ss_dssp -SEEEEEETT-CCGGGS-----------S-SSSSEEEEEETT--TTGGG
T ss_pred CeEEeeCCCCCCccccc-C--------CCCCCCCcccEEECCCeeeccc
Confidence 46899999999986432 1 1112344566789999999754
No 329
>PF01580 FtsK_SpoIIIE: FtsK/SpoIIIE family; InterPro: IPR002543 The FtsK/SpoIIIE domain is found extensively in a wide variety of proteins from prokaryotes and plasmids [] some of which contain up to three copies.The domain contains a putative ATP binding P-loop motif. A mutation in FtsK causes a temperature sensitive block in cell division and it is involved in peptidoglycan synthesis or modification []. The SpoIIIE protein is implicated in intercellular chromosomal DNA transfer []. ; GO: 0000166 nucleotide binding, 0003677 DNA binding, 0005524 ATP binding, 0007049 cell cycle, 0007059 chromosome segregation, 0051301 cell division, 0016021 integral to membrane; PDB: 2IUS_E 2IUU_A 2IUT_A.
Probab=27.19 E-value=1.4e+02 Score=23.85 Aligned_cols=39 Identities=15% Similarity=0.118 Sum_probs=22.5
Q ss_pred EEECCCCCchhhH-H-HHHHHHhh----CCcEEEeeCCCCCCCCC
Q 021424 29 VFLHGFPEIWYSW-R-HQMVGVAT----AGFRAIAPDCRGYGLSD 67 (312)
Q Consensus 29 lllHG~~~~~~~~-~-~~~~~l~~----~~~~vi~~Dl~G~G~S~ 67 (312)
++|-|-+++..+. . .++..++. .+.+++.+|..|.+.+.
T Consensus 41 ~li~G~tgsGKS~~l~~ll~~l~~~~~p~~~~l~iiD~k~~~l~~ 85 (205)
T PF01580_consen 41 LLIAGATGSGKSTLLRTLLLSLALTYSPDDVQLYIIDPKGSDLAP 85 (205)
T ss_dssp EEEE--TTSSHHHHHHHHHHHHHTT--TTTEEEEEE-TTSSCCGG
T ss_pred EEEEcCCCCCccHHHHHHHHHHHHHhcCCccEEEEEcCCccccch
Confidence 4566766655543 2 34445555 57899999999776543
No 330
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=26.85 E-value=4.8e+02 Score=23.66 Aligned_cols=87 Identities=13% Similarity=0.072 Sum_probs=49.2
Q ss_pred ceEEEECCCC---CchhhHHHHHHHHhhCCcEEEeeCCCCC--CCCCCCCCCCCCCHHHHHHHHHHHHHH---hCCceEE
Q 021424 26 HVVVFLHGFP---EIWYSWRHQMVGVATAGFRAIAPDCRGY--GLSDPPAEPEKTSFQDMVDDLLAILDH---LGLAKVF 97 (312)
Q Consensus 26 ~~vlllHG~~---~~~~~~~~~~~~l~~~~~~vi~~Dl~G~--G~S~~~~~~~~~~~~~~a~di~~~~~~---l~~~~~~ 97 (312)
.||+++.-.. ....-....+..|.+.|+.|+-+..--+ |.... +..-+.+++++.+.+.+.. +...++.
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~~g~~ac~~~g~---g~~~~~~~i~~~v~~~~~~~~~~~~~~vl 189 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPDSGLLACGDEGK---GRLAEPETIVKAAEREFSPKEDLEGKRVL 189 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCCCcccccccccC---CCCCCHHHHHHHHHHHHhhccccCCceEE
Confidence 3566666532 2222334566778777777665553222 33322 2344677888888877654 4445565
Q ss_pred EEEc------------------CccHHHHHHHHHhc
Q 021424 98 LVAK------------------DFGALTAYMFAIQH 115 (312)
Q Consensus 98 lvGh------------------S~Gg~va~~~a~~~ 115 (312)
+.|- .||..++..++.+.
T Consensus 190 it~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~G 225 (390)
T TIGR00521 190 ITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRG 225 (390)
T ss_pred EecCCccCCCCceeeecCCCcchHHHHHHHHHHHCC
Confidence 5555 36677777766655
No 331
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=26.36 E-value=66 Score=31.78 Aligned_cols=32 Identities=19% Similarity=0.334 Sum_probs=22.7
Q ss_pred HHHHHHHH---HhCCceEEEEEcCccHHHHHHHHH
Q 021424 82 DDLLAILD---HLGLAKVFLVAKDFGALTAYMFAI 113 (312)
Q Consensus 82 ~di~~~~~---~l~~~~~~lvGhS~Gg~va~~~a~ 113 (312)
.++.+.++ .+++.-=.++|.|.||.++..+|+
T Consensus 51 ~~l~~~l~~~~~~~~~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 51 GALLELLGAHLRLRVRVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred HHHHHHhhhhhccCCCCceEEeeCHHHHHHHHHHc
Confidence 33444444 345555567899999999999997
No 332
>PRK14581 hmsF outer membrane N-deacetylase; Provisional
Probab=25.90 E-value=76 Score=30.98 Aligned_cols=76 Identities=14% Similarity=0.190 Sum_probs=49.7
Q ss_pred CCceEEEECCCCC----------chhhHHHHHHHHhhCCcEEEeeCCCC---CCCCCCCCC------CCCCCHHHHHHHH
Q 021424 24 DAHVVVFLHGFPE----------IWYSWRHQMVGVATAGFRAIAPDCRG---YGLSDPPAE------PEKTSFQDMVDDL 84 (312)
Q Consensus 24 ~~~~vlllHG~~~----------~~~~~~~~~~~l~~~~~~vi~~Dl~G---~G~S~~~~~------~~~~~~~~~a~di 84 (312)
++.+||+-|.... +...|..++..|.+.||++|.+|-.= .|....++. ++.| .+..+.+
T Consensus 47 ~~~~VLmYH~V~d~~~~~~~~~Vspe~Fe~QL~~Lk~nGY~~VSL~el~~~~~g~~~LP~KaV~LTFDDGy--~sny~~A 124 (672)
T PRK14581 47 NTFVVIAYHDVEDDSADQRYLSVRSSALNEQFVWLRDNGYHVVSVDQILAARNGGPTLPDKAVLLTFDDGY--SSFYRRV 124 (672)
T ss_pred CceEEEEeCcccCCCCccCccccCHHHHHHHHHHHHHCcCEEecHHHHHHHHhcCCCCCCCeEEEEEEcCC--cchHHHH
Confidence 5678999998743 23578899999998899999997321 122211111 1222 3466778
Q ss_pred HHHHHHhCCce-EEEEEc
Q 021424 85 LAILDHLGLAK-VFLVAK 101 (312)
Q Consensus 85 ~~~~~~l~~~~-~~lvGh 101 (312)
.-+++..++.- +.+||.
T Consensus 125 lPILKkyg~pATfFvVg~ 142 (672)
T PRK14581 125 YPLLKAYKWSAVLAPVGT 142 (672)
T ss_pred HHHHHHcCCCEEEEEech
Confidence 88999999865 444553
No 333
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=25.88 E-value=1.2e+02 Score=26.00 Aligned_cols=50 Identities=22% Similarity=0.353 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHhCCc---eEEEEEcCccHHHHHHHH---HhcccccceeEEecCCC
Q 021424 80 MVDDLLAILDHLGLA---KVFLVAKDFGALTAYMFA---IQHQERVSGVITLGVPI 129 (312)
Q Consensus 80 ~a~di~~~~~~l~~~---~~~lvGhS~Gg~va~~~a---~~~p~~v~~lv~~~~~~ 129 (312)
+.+.+.+-+++|.-+ |+++.|.|+|++-+...- ...-+++.+.++.|++.
T Consensus 92 L~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 92 LFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPF 147 (289)
T ss_pred HHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCC
Confidence 444555555666433 699999999998777543 22335789999888763
No 334
>PF09664 DUF2399: Protein of unknown function C-terminus (DUF2399); InterPro: IPR024465 This domain is found in archaeal, bacterial and eukaryotic proteins. Its function is unknown.
Probab=25.60 E-value=1e+02 Score=23.72 Aligned_cols=32 Identities=25% Similarity=0.220 Sum_probs=23.6
Q ss_pred CCceEEEECCCCCchhhHHHHHHHHhhCCcEEEe
Q 021424 24 DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIA 57 (312)
Q Consensus 24 ~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~ 57 (312)
..+|+|+.+|.|.... ..+++.|.+.|.+++.
T Consensus 40 ~~~pLVCt~G~p~~A~--~~LL~~L~~~g~~l~y 71 (152)
T PF09664_consen 40 SCPPLVCTSGQPSAAA--RRLLDRLAAAGARLYY 71 (152)
T ss_pred CCCeEEEcCCcHHHHH--HHHHHHHHhCCCEEEE
Confidence 4689999999988643 3577788777776554
No 335
>PF05908 DUF867: Protein of unknown function (DUF867); InterPro: IPR008585 This family consists of a number of bacterial and phage proteins with no known function and which are found in Bacillus species and the Lambda-like viruses.; PDB: 3A9L_A.
Probab=25.50 E-value=45 Score=26.86 Aligned_cols=44 Identities=9% Similarity=0.067 Sum_probs=27.8
Q ss_pred CCeEEEEEecCCCCceEEEECCCC---CchhhHHHHHHHHh-hCCcEEEeeC
Q 021424 12 QGLNLHIAEAGADAHVVVFLHGFP---EIWYSWRHQMVGVA-TAGFRAIAPD 59 (312)
Q Consensus 12 ~g~~i~~~~~g~~~~~vlllHG~~---~~~~~~~~~~~~l~-~~~~~vi~~D 59 (312)
.+++|.+...+.+...|+-+||.+ +++ .++..++ ..+|.++++.
T Consensus 15 ~dy~I~~~~~~~s~vlvlApHGGgIE~gTs----ElA~~iA~~~~~s~y~Fe 62 (194)
T PF05908_consen 15 KDYRIETRDRKGSDVLVLAPHGGGIEPGTS----ELAEAIADGGDYSYYLFE 62 (194)
T ss_dssp TSEEEEEEE---SSEEEEEEEEETTSTTHH----HHHHHHHHHH--EEEEEE
T ss_pred CceEEEEecCCCCcEEEEecccCccCcCHH----HHHHHHhccCCCCEEEEe
Confidence 678999998833667899999875 443 2556666 3468888854
No 336
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=24.93 E-value=75 Score=27.75 Aligned_cols=22 Identities=23% Similarity=0.341 Sum_probs=18.7
Q ss_pred CCceEEEEEcCccHHHHHHHHH
Q 021424 92 GLAKVFLVAKDFGALTAYMFAI 113 (312)
Q Consensus 92 ~~~~~~lvGhS~Gg~va~~~a~ 113 (312)
+..+..+.|||+|=+.|+..+.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 4677789999999999988776
No 337
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=24.81 E-value=52 Score=19.35 Aligned_cols=33 Identities=18% Similarity=0.352 Sum_probs=21.4
Q ss_pred hCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 021424 50 TAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILD 89 (312)
Q Consensus 50 ~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~ 89 (312)
+.+|.+.+||+||.--. ..|+++-.+.+.+.++
T Consensus 11 ~~~y~~~~pdlpg~~t~-------G~t~eea~~~~~eal~ 43 (48)
T PF03681_consen 11 DGGYVAYFPDLPGCFTQ-------GDTLEEALENAKEALE 43 (48)
T ss_dssp SSSEEEEETTCCTCEEE-------ESSHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCccChhhc-------CCCHHHHHHHHHHHHH
Confidence 35799999999987622 2256665555555443
No 338
>cd01311 PDC_hydrolase 2-pyrone-4,6-dicarboxylic acid (PDC) hydrolase hydrolyzes PDC to yield 4-oxalomesaconic acid (OMA) or its tautomer, 4-carboxy-2-hydroxymuconic acid (CHM). This reaction is part of the protocatechuate (PCA) 4,5-cleavage pathway. PCA is one of the most important intermediate metabolites in the bacterial pathways for various phenolic compounds, including lignin, which is the most abundant aromatic material in nature.
Probab=24.53 E-value=4e+02 Score=22.31 Aligned_cols=46 Identities=24% Similarity=0.377 Sum_probs=31.2
Q ss_pred HHHHHHHHHHhCCceEEEEEcCccHH-HHHH-HHHhcccccceeEEec
Q 021424 81 VDDLLAILDHLGLAKVFLVAKDFGAL-TAYM-FAIQHQERVSGVITLG 126 (312)
Q Consensus 81 a~di~~~~~~l~~~~~~lvGhS~Gg~-va~~-~a~~~p~~v~~lv~~~ 126 (312)
.+++.+.++..|+++.++|.-|.-+. -... -+.+.++++.+++.++
T Consensus 30 ~e~l~~~m~~~gV~~aV~vq~~~~~~~n~~~~~~~~~~~r~~g~~~~~ 77 (263)
T cd01311 30 IDDLRALRSTLGIDRVVIVQASIYGADNSNLLDALASNGKARGGATVD 77 (263)
T ss_pred HHHHHHHHHHhCCCcEEEeCccccCCchHHHHHHHhhCCCeEEEEEEC
Confidence 77778888899999999998664332 1111 1222568898888775
No 339
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=23.62 E-value=56 Score=28.38 Aligned_cols=20 Identities=15% Similarity=0.277 Sum_probs=17.2
Q ss_pred CCCceEEEECCCCCchhhHH
Q 021424 23 ADAHVVVFLHGFPEIWYSWR 42 (312)
Q Consensus 23 ~~~~~vlllHG~~~~~~~~~ 42 (312)
+.+|-+|=+|||+|+..+|-
T Consensus 107 p~KPLvLSfHG~tGTGKN~V 126 (344)
T KOG2170|consen 107 PRKPLVLSFHGWTGTGKNYV 126 (344)
T ss_pred CCCCeEEEecCCCCCchhHH
Confidence 36888999999999999873
No 340
>TIGR02683 upstrm_HI1419 probable addiction module killer protein. Members of this strictly bacterial protein family are small, at roughly 100 amino acids. The gene is almost invariably the upstream member of a gene pair, where the downstream member is a predicted DNA-binding protein from a clade within Pfam helix-turn-helix family pfam01381. These gene pairs, when found on the bacterial chromosome, often are located with prophage regions, but also in both integrated plasmid regions and near housekeeping genes. Analysis suggests that the gene pair may serve as an addiction module.
Probab=23.56 E-value=99 Score=21.42 Aligned_cols=24 Identities=17% Similarity=0.317 Sum_probs=16.7
Q ss_pred CeEEEEEecCCCCceEEEECCCCCch
Q 021424 13 GLNLHIAEAGADAHVVVFLHGFPEIW 38 (312)
Q Consensus 13 g~~i~~~~~g~~~~~vlllHG~~~~~ 38 (312)
++++.|...+ +..+|++|||--..
T Consensus 57 ~yRiif~~~~--~~~vvll~gf~Kk~ 80 (95)
T TIGR02683 57 GYRVYFTQRG--KVIILLLCGGDKST 80 (95)
T ss_pred CEEEEEEEEC--CEEEEEEeCEeccC
Confidence 6777776655 34788999986433
No 341
>PRK10431 N-acetylmuramoyl-l-alanine amidase II; Provisional
Probab=22.97 E-value=2.2e+02 Score=26.38 Aligned_cols=71 Identities=20% Similarity=0.163 Sum_probs=35.4
Q ss_pred EEEeeCCCCCCCCCCCCCC-CCCC----HHHHHHHHHHHHHHhCCceEEEEEc-CccHHHHHHHHHhcccccceeEEe
Q 021424 54 RAIAPDCRGYGLSDPPAEP-EKTS----FQDMVDDLLAILDHLGLAKVFLVAK-DFGALTAYMFAIQHQERVSGVITL 125 (312)
Q Consensus 54 ~vi~~Dl~G~G~S~~~~~~-~~~~----~~~~a~di~~~~~~l~~~~~~lvGh-S~Gg~va~~~a~~~p~~v~~lv~~ 125 (312)
-+|++| ||||..|..... .... .-++|..+.+.++..+.-++++.=- +.-=.+.-+....+-....-+|++
T Consensus 192 ~vIvID-pGHGG~DpGA~g~~G~~EKdv~L~iA~~L~~~L~~~~g~~VvlTR~~D~~v~L~eR~~iAn~~~ADLFISI 268 (445)
T PRK10431 192 VIIAID-AGHGGQDPGAIGPGGTREKNVTIAIARKLRTLLNDDPMFKGVLTRDGDYFISVMGRSDVARKQNANFLVSI 268 (445)
T ss_pred eEEEEe-CCCCCCCCCCcCCCCccHHHHHHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCHHHHHHHHHHcCCCEEEEE
Confidence 478999 799998864322 1111 1235666666776654335555411 111123334433333344445555
No 342
>PRK09936 hypothetical protein; Provisional
Probab=22.95 E-value=3.5e+02 Score=23.44 Aligned_cols=52 Identities=19% Similarity=0.259 Sum_probs=40.3
Q ss_pred chhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCc
Q 021424 37 IWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLA 94 (312)
Q Consensus 37 ~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~ 94 (312)
+...|+..+..+...|++.+.+=.-++|.|+... -+.+..+..+...+.|++
T Consensus 36 ~~~qWq~~~~~~~~~G~~tLivQWt~yG~~~fg~------~~g~La~~l~~A~~~Gl~ 87 (296)
T PRK09936 36 TDTQWQGLWSQLRLQGFDTLVVQWTRYGDADFGG------QRGWLAKRLAAAQQAGLK 87 (296)
T ss_pred CHHHHHHHHHHHHHcCCcEEEEEeeeccCCCccc------chHHHHHHHHHHHHcCCE
Confidence 4567998888888899999999999999986532 245667777777777763
No 343
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=22.83 E-value=2e+02 Score=22.20 Aligned_cols=44 Identities=20% Similarity=0.173 Sum_probs=28.3
Q ss_pred CCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEcCcc
Q 021424 51 AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFG 104 (312)
Q Consensus 51 ~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~~~~lvGhS~G 104 (312)
.+-.+|++|..|-= ++-.++|+.+......-.-+-+.+||-|.|
T Consensus 66 ~~~~~i~Ld~~Gk~----------~sS~~fA~~l~~~~~~g~~~i~F~IGG~~G 109 (155)
T PF02590_consen 66 PNDYVILLDERGKQ----------LSSEEFAKKLERWMNQGKSDIVFIIGGADG 109 (155)
T ss_dssp TTSEEEEE-TTSEE------------HHHHHHHHHHHHHTTS-EEEEEE-BTTB
T ss_pred CCCEEEEEcCCCcc----------CChHHHHHHHHHHHhcCCceEEEEEecCCC
Confidence 46789999988643 345577877777766533345778999998
No 344
>cd01014 nicotinamidase_related Nicotinamidase_ related amidohydrolases. Cysteine hydrolases of unknown function that share the catalytic triad with other amidohydrolases, like nicotinamidase, which converts nicotinamide to nicotinic acid and ammonia.
Probab=22.76 E-value=1.8e+02 Score=22.11 Aligned_cols=46 Identities=9% Similarity=0.026 Sum_probs=31.9
Q ss_pred HHHHHHHHHhCCceEEEEEcCccHHHHHHHHHhcccccceeEEecC
Q 021424 82 DDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGV 127 (312)
Q Consensus 82 ~di~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~ 127 (312)
.++.++++..+++.++++|-+....|........-.-++-.|..++
T Consensus 88 t~l~~~L~~~gi~~viv~G~~td~CV~~Ta~~a~~~g~~v~vi~Da 133 (155)
T cd01014 88 TDLEEWLREAGIDHLVICGAMTEMCVDTTVRSAFDLGYDVTVVADA 133 (155)
T ss_pred CCHHHHHHHCCCCEEEEEeeccchhHHHHHHHHHHCCCcEEEeccc
Confidence 3678888999999999999999766665554433333555554443
No 345
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=22.63 E-value=62 Score=27.82 Aligned_cols=21 Identities=19% Similarity=0.240 Sum_probs=17.1
Q ss_pred eEE-EEEcCccHHHHHHHHHhc
Q 021424 95 KVF-LVAKDFGALTAYMFAIQH 115 (312)
Q Consensus 95 ~~~-lvGhS~Gg~va~~~a~~~ 115 (312)
.+. ++|.|.||.+|..+|..+
T Consensus 34 ~fD~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 34 QIDLFAGTSAGSLIALGLALGY 55 (288)
T ss_pred ceeEEEEeCHHHHHHHHHHcCc
Confidence 344 579999999999998754
No 346
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=22.47 E-value=78 Score=27.94 Aligned_cols=18 Identities=28% Similarity=0.324 Sum_probs=15.0
Q ss_pred EEEEcCccHHHHHHHHHh
Q 021424 97 FLVAKDFGALTAYMFAIQ 114 (312)
Q Consensus 97 ~lvGhS~Gg~va~~~a~~ 114 (312)
.++|||+|=+.|...|..
T Consensus 127 ~~~GHSlGE~aA~~~AG~ 144 (343)
T PLN02752 127 VCAGLSLGEYTALVFAGA 144 (343)
T ss_pred eeeeccHHHHHHHHHhCC
Confidence 479999999998887754
No 347
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=22.14 E-value=69 Score=24.78 Aligned_cols=21 Identities=24% Similarity=0.240 Sum_probs=16.4
Q ss_pred eEEEEEcCccHHHHHHHHHhc
Q 021424 95 KVFLVAKDFGALTAYMFAIQH 115 (312)
Q Consensus 95 ~~~lvGhS~Gg~va~~~a~~~ 115 (312)
--.+.|.|.||.+|..++...
T Consensus 28 ~d~i~GtS~Gal~a~~~~~~~ 48 (204)
T PF01734_consen 28 FDVISGTSAGALNAALLALGY 48 (204)
T ss_dssp -SEEEEECCHHHHHHHHHTC-
T ss_pred ccEEEEcChhhhhHHHHHhCC
Confidence 345789999999998888763
No 348
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=21.81 E-value=3.5e+02 Score=26.27 Aligned_cols=60 Identities=15% Similarity=0.229 Sum_probs=31.2
Q ss_pred CceEEEECCCCCch---hhHHHHHHHHhhCCc--EEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 021424 25 AHVVVFLHGFPEIW---YSWRHQMVGVATAGF--RAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDH 90 (312)
Q Consensus 25 ~~~vlllHG~~~~~---~~~~~~~~~l~~~~~--~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~ 90 (312)
..|+|+|||--+.- ..=..+...|...|. +++.+---|||.+.. . ......+.+.++++.
T Consensus 551 ~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~----~--~~~~~~~~~~~~~~~ 615 (620)
T COG1506 551 KTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRP----E--NRVKVLKEILDWFKR 615 (620)
T ss_pred CCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCc----h--hHHHHHHHHHHHHHH
Confidence 46899999975322 111223445554454 555555556776641 1 233444555555443
No 349
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.49 E-value=1.8e+02 Score=25.38 Aligned_cols=35 Identities=14% Similarity=0.221 Sum_probs=27.6
Q ss_pred HHHHHHHHHHhCC----ceEEEEEcC--ccHHHHHHHHHhc
Q 021424 81 VDDLLAILDHLGL----AKVFLVAKD--FGALTAYMFAIQH 115 (312)
Q Consensus 81 a~di~~~~~~l~~----~~~~lvGhS--~Gg~va~~~a~~~ 115 (312)
+.-+.+++++.++ .++.+||.| ||..++..+....
T Consensus 143 p~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~g 183 (301)
T PRK14194 143 PSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAH 183 (301)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCC
Confidence 5567788888764 479999996 9999999998654
No 350
>CHL00041 rps11 ribosomal protein S11
Probab=21.45 E-value=3.3e+02 Score=19.82 Aligned_cols=59 Identities=12% Similarity=0.134 Sum_probs=40.1
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEE--EcCccHHHHHHHHHhccccccee
Q 021424 61 RGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLV--AKDFGALTAYMFAIQHQERVSGV 122 (312)
Q Consensus 61 ~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~~~~lv--GhS~Gg~va~~~a~~~p~~v~~l 122 (312)
.|+-.+.+. ..|..+..++.+.+.+.++|+..++++ |-..|.-.++....+..-+|.++
T Consensus 45 ~gfKg~rK~---T~~Aa~~~a~~~~~~~~~~gi~~v~I~ikG~G~Gr~~~ir~l~~~glkI~~I 105 (116)
T CHL00041 45 CGFKGARKG---TPFAAQTAAENAIRTVIDQGMKRAEVMIKGPGLGRDTALRAIRRSGLKLSSI 105 (116)
T ss_pred eeeCCCccC---CHHHHHHHHHHHHHHHHHcCCcEEEEEEECCCCcHHHHHHHHHHCCCEEEEE
Confidence 344445432 356677789999999999999987765 77778877777665544344333
No 351
>PF15566 Imm18: Immunity protein 18
Probab=21.36 E-value=1.3e+02 Score=18.44 Aligned_cols=30 Identities=17% Similarity=0.292 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHhCCceEEEEEcCccHH
Q 021424 77 FQDMVDDLLAILDHLGLAKVFLVAKDFGAL 106 (312)
Q Consensus 77 ~~~~a~di~~~~~~l~~~~~~lvGhS~Gg~ 106 (312)
+.-+++++..+.+....+..|+.--||||.
T Consensus 4 L~~L~~~l~~L~~~~~~~H~Hlmtp~WgG~ 33 (52)
T PF15566_consen 4 LELLQDQLENLQEKEPFDHEHLMTPDWGGE 33 (52)
T ss_pred HHHHHHHHHHHHhccCCCCceecccccccc
Confidence 455677788888777777899999999985
No 352
>PRK10319 N-acetylmuramoyl-l-alanine amidase I; Provisional
Probab=21.23 E-value=2.2e+02 Score=24.55 Aligned_cols=72 Identities=19% Similarity=0.192 Sum_probs=36.3
Q ss_pred CcEEEeeCCCCCCCCCCCCCC-CCCC----HHHHHHHHHHHHHHhCCceEEEEEc-CccHHHHHHHHHhcccccceeEEe
Q 021424 52 GFRAIAPDCRGYGLSDPPAEP-EKTS----FQDMVDDLLAILDHLGLAKVFLVAK-DFGALTAYMFAIQHQERVSGVITL 125 (312)
Q Consensus 52 ~~~vi~~Dl~G~G~S~~~~~~-~~~~----~~~~a~di~~~~~~l~~~~~~lvGh-S~Gg~va~~~a~~~p~~v~~lv~~ 125 (312)
+-++|++| ||||..|+..-. .... -.+.|.-+.+.++..|. +|++.=. +--=.+..+....+-...+-+|++
T Consensus 55 ~~~~IvID-pGHGG~DpGAvg~~G~~EKdi~L~IA~~l~~~L~~~G~-~V~lTR~~D~~vsL~~R~~~An~~~ADlFISI 132 (287)
T PRK10319 55 GKRVVMLD-PGHGGIDTGAIGRNGSKEKHVVLAIAKNVRSILRNHGI-DARLTRSGDTFIPLYDRVEIAHKHGADLFMSI 132 (287)
T ss_pred CCeEEEEE-CCCCCCCCCCcCCCCCcHHHHHHHHHHHHHHHHHHCCC-EEEEeCCCCCCCCHHHHHHHHHhcCCCEEEEe
Confidence 45799999 699998754221 1122 22356666667766655 4444311 111123444444443344555554
No 353
>PRK15180 Vi polysaccharide biosynthesis protein TviD; Provisional
Probab=21.15 E-value=2.2e+02 Score=26.68 Aligned_cols=76 Identities=16% Similarity=0.158 Sum_probs=51.9
Q ss_pred ceEEEECCCCCchh-hHHHHHHHHhhCCcEEEeeCCCCCCCCCCC-----CCC------------------CCCCHHHHH
Q 021424 26 HVVVFLHGFPEIWY-SWRHQMVGVATAGFRAIAPDCRGYGLSDPP-----AEP------------------EKTSFQDMV 81 (312)
Q Consensus 26 ~~vlllHG~~~~~~-~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~-----~~~------------------~~~~~~~~a 81 (312)
..++.+-|++-... .-+++.+.|+..+.+.+.+|+++-|.-... .++ ...+-...-
T Consensus 97 qKkl~~dG~~LQ~NyVvrHF~Effsd~~R~~mfWSLa~Ad~raqRlAYL~ddP~FAgLs~D~r~lLs~ivvrq~teaEIE 176 (831)
T PRK15180 97 QKKIMAYGFCLQINYLTRHFYEFFSQTERACMYWSLATQGNRHKLLAYLKDDPCFAGMSEDDRALLSNINVEQMDEHAIE 176 (831)
T ss_pred eeeEEeccchhhHHHHHHHHHHHhhhcchhhhhhhcccccchhHHHHHhhcChhhhhhhHhHHHHHHhhHhhcccHHHHH
Confidence 45788999875443 345666788888888899999999876541 011 111334455
Q ss_pred HHHHHHHHHhCCceEEEEEc
Q 021424 82 DDLLAILDHLGLAKVFLVAK 101 (312)
Q Consensus 82 ~di~~~~~~l~~~~~~lvGh 101 (312)
+|+.++..-||-++|.+|-|
T Consensus 177 eDmmeIVqLLGk~rVvfVTH 196 (831)
T PRK15180 177 QDMMEIVQLLGRDRVMFMTH 196 (831)
T ss_pred HHHHHHHHHhCCCcEEEEEe
Confidence 67777777788889888877
No 354
>PRK14974 cell division protein FtsY; Provisional
Probab=21.13 E-value=5.9e+02 Score=22.58 Aligned_cols=67 Identities=21% Similarity=0.245 Sum_probs=45.1
Q ss_pred hhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEcCccHHHHHHHHHhcc--cccceeEEe
Q 021424 49 ATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQ--ERVSGVITL 125 (312)
Q Consensus 49 ~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p--~~v~~lv~~ 125 (312)
...++.+|.+|-+|...++ ..+.+.+..+.+...-+.+++|.-+.-|.-+..-|..+. -.+.++|+.
T Consensus 219 ~~~~~DvVLIDTaGr~~~~----------~~lm~eL~~i~~~~~pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIlT 287 (336)
T PRK14974 219 KARGIDVVLIDTAGRMHTD----------ANLMDELKKIVRVTKPDLVIFVGDALAGNDAVEQAREFNEAVGIDGVILT 287 (336)
T ss_pred HhCCCCEEEEECCCccCCc----------HHHHHHHHHHHHhhCCceEEEeeccccchhHHHHHHHHHhcCCCCEEEEe
Confidence 3457889999998766432 245566677777777777888887777766666665543 357777764
No 355
>TIGR00246 tRNA_RlmH_YbeA rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA.
Probab=21.09 E-value=2.5e+02 Score=21.65 Aligned_cols=42 Identities=17% Similarity=0.149 Sum_probs=22.5
Q ss_pred cEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEcCccH
Q 021424 53 FRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGA 105 (312)
Q Consensus 53 ~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~~~~lvGhS~Gg 105 (312)
-.||++|-+|-= ++-.++|+.+....+. +-+-+.+||-+.|=
T Consensus 66 ~~~i~LDe~Gk~----------~sS~~fA~~l~~~~~~-g~~i~FvIGGa~G~ 107 (153)
T TIGR00246 66 AHVVTLDIPGKP----------WTTPQLADTLEKWKTD-GRDVTLLIGGPEGL 107 (153)
T ss_pred CeEEEEcCCCCc----------CCHHHHHHHHHHHhcc-CCeEEEEEcCCCcC
Confidence 357777776533 2334556666555322 22345566777663
No 356
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=20.74 E-value=5.4e+02 Score=21.98 Aligned_cols=73 Identities=22% Similarity=0.270 Sum_probs=47.3
Q ss_pred CCceEEEECCCCCchhhHHHHHHHHhhCCc-EEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEcC
Q 021424 24 DAHVVVFLHGFPEIWYSWRHQMVGVATAGF-RAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKD 102 (312)
Q Consensus 24 ~~~~vlllHG~~~~~~~~~~~~~~l~~~~~-~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~~~~lvGhS 102 (312)
+-|.+||.=-.+--.+.-+.+++.+.+.|. .++.+|+| . +.++++...++..|++.+.||--+
T Consensus 94 ~~Pivlm~Y~Npi~~~Gie~F~~~~~~~GvdGlivpDLP--------~--------ee~~~~~~~~~~~gi~~I~lvaPt 157 (265)
T COG0159 94 KVPIVLMTYYNPIFNYGIEKFLRRAKEAGVDGLLVPDLP--------P--------EESDELLKAAEKHGIDPIFLVAPT 157 (265)
T ss_pred CCCEEEEEeccHHHHhhHHHHHHHHHHcCCCEEEeCCCC--------h--------HHHHHHHHHHHHcCCcEEEEeCCC
Confidence 346666655555444444555566666665 69999997 1 456778888889999999998655
Q ss_pred ccHHHHHHHH
Q 021424 103 FGALTAYMFA 112 (312)
Q Consensus 103 ~Gg~va~~~a 112 (312)
-.-----.++
T Consensus 158 t~~~rl~~i~ 167 (265)
T COG0159 158 TPDERLKKIA 167 (265)
T ss_pred CCHHHHHHHH
Confidence 5443333333
No 357
>PRK14582 pgaB outer membrane N-deacetylase; Provisional
Probab=20.69 E-value=1.1e+02 Score=30.00 Aligned_cols=75 Identities=13% Similarity=0.163 Sum_probs=47.3
Q ss_pred CCceEEEECCCCC----------chhhHHHHHHHHhhCCcEEEeeCCC-----CCCCC-CCC---CCCCCCCHHHHHHHH
Q 021424 24 DAHVVVFLHGFPE----------IWYSWRHQMVGVATAGFRAIAPDCR-----GYGLS-DPP---AEPEKTSFQDMVDDL 84 (312)
Q Consensus 24 ~~~~vlllHG~~~----------~~~~~~~~~~~l~~~~~~vi~~Dl~-----G~G~S-~~~---~~~~~~~~~~~a~di 84 (312)
++.+||+-|.... +...|..++..|.+.||++|.+|-. |-... ++. +-++.| .+....+
T Consensus 47 ~~~~VL~YH~V~d~~~~~~~~~Vspe~Fe~qL~~Lk~nGY~~ISl~el~~~~~g~~~LP~K~VaLTFDDGy--~s~yt~A 124 (671)
T PRK14582 47 NGFVAIAYHDVEDEAADQRFMSVRTSALREQFAWLRENGYQPVSVAQILEAHRGGKPLPEKAVLLTFDDGY--SSFYTRV 124 (671)
T ss_pred CceEEEEeCcccCCcccccccccCHHHHHHHHHHHHHCcCEEccHHHHHHHHhcCCCCCCCeEEEEEEcCC--CchHHHH
Confidence 5678999998643 3457889999999989999999832 32111 111 111222 2344567
Q ss_pred HHHHHHhCCceE-EEEE
Q 021424 85 LAILDHLGLAKV-FLVA 100 (312)
Q Consensus 85 ~~~~~~l~~~~~-~lvG 100 (312)
.-++++.++.-. .++|
T Consensus 125 ~PILkkygvpATfFlvg 141 (671)
T PRK14582 125 FPILQAFQWPAVWAPVG 141 (671)
T ss_pred HHHHHHcCCCEEEEEec
Confidence 788999998653 3444
No 358
>PF07380 Pneumo_M2: Pneumovirus M2 protein; InterPro: IPR009969 This family consists of several Pneumovirus M2 proteins. The M2-1 protein of respiratory syncytial virus (RSV) is a transcription processivity factor that is essential for virus replication [].
Probab=20.63 E-value=1.3e+02 Score=20.03 Aligned_cols=35 Identities=23% Similarity=0.283 Sum_probs=24.9
Q ss_pred CCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHhCCc
Q 021424 60 CRGYGLSDPPA-EPEKTSFQDMVDDLLAILDHLGLA 94 (312)
Q Consensus 60 l~G~G~S~~~~-~~~~~~~~~~a~di~~~~~~l~~~ 94 (312)
++.|=.|.... +.-.++-+++.+++..|+..+|+.
T Consensus 44 ~~nh~ys~N~~fdeIhWTsq~Lid~~q~fLqhlgis 79 (89)
T PF07380_consen 44 YNNHMYSPNHMFDEIHWTSQDLIDATQNFLQHLGIS 79 (89)
T ss_pred CCccccccCccchhhccchHHHHHHHHHHHHHcCCC
Confidence 34444554322 223689999999999999999975
No 359
>PRK05309 30S ribosomal protein S11; Validated
Probab=20.43 E-value=3.3e+02 Score=20.22 Aligned_cols=54 Identities=15% Similarity=0.030 Sum_probs=38.9
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEE--EcCccHHHHHHHHHhcc
Q 021424 60 CRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLV--AKDFGALTAYMFAIQHQ 116 (312)
Q Consensus 60 l~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~~~~lv--GhS~Gg~va~~~a~~~p 116 (312)
..|+..+.+. ..|..+..++.+.+.+.++|+..++++ |-..|...++.......
T Consensus 48 ~~gfKg~rK~---T~~Aa~~aa~~~~~~~~~~gi~~v~v~ikG~G~Gr~~air~L~~~g 103 (128)
T PRK05309 48 GLGFKGSRKS---TPYAAQVAAEDAAKKAKEHGMKTVEVFVKGPGSGRESAIRALQAAG 103 (128)
T ss_pred ccEeCCCccC---CHHHHHHHHHHHHHHHHHcCCcEEEEEEECCCCcHHHHHHHHHHCC
Confidence 4455555432 356677789999999999999887765 88888888877766543
No 360
>PRK14665 mnmA tRNA-specific 2-thiouridylase MnmA; Provisional
Probab=20.34 E-value=4.2e+02 Score=23.75 Aligned_cols=62 Identities=18% Similarity=0.243 Sum_probs=39.9
Q ss_pred CCceEEEECCCCCchhhHHHHHHHHhhCCcEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEE
Q 021424 24 DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLV 99 (312)
Q Consensus 24 ~~~~vlllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~di~~~~~~l~~~~~~lv 99 (312)
+..++|.+-|.-+|+-... .|.+.|+.|+++-+.....+. + .+-.+++.++.+.|++ +++++
T Consensus 5 ~~kVlValSGGVDSsvaa~----LL~~~G~~V~~v~~~~~~~~~--------~-~~d~~~a~~va~~LgI-p~~vv 66 (360)
T PRK14665 5 NKRVLLGMSGGTDSSVAAM----LLLEAGYEVTGVTFRFYEFNG--------S-TEYLEDARALAERLGI-GHITY 66 (360)
T ss_pred CCEEEEEEcCCHHHHHHHH----HHHHcCCeEEEEEEecCCCCC--------C-hHHHHHHHHHHHHhCC-CEEEE
Confidence 3468889999988875432 233457888887766432211 1 2347788899999998 44444
No 361
>cd01012 YcaC_related YcaC related amidohydrolases; E.coli YcaC is an homooctameric hydrolase with unknown specificity. Despite its weak sequence similarity, it is structurally related to other amidohydrolases and shares conserved active site residues with them. Multimerisation interface seems not to be conserved in all members.
Probab=20.09 E-value=3e+02 Score=20.92 Aligned_cols=47 Identities=11% Similarity=-0.015 Sum_probs=34.3
Q ss_pred HHHHHHHHHhCCceEEEEEcCccHHHHHHHHHhcccccceeEEecCC
Q 021424 82 DDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 128 (312)
Q Consensus 82 ~di~~~~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lv~~~~~ 128 (312)
.++..+++..|++.++++|.+--..|.......+-.-.+-++..++.
T Consensus 77 t~L~~~L~~~gi~~lii~G~~T~~CV~~Ta~~a~~~g~~v~v~~Da~ 123 (157)
T cd01012 77 EAFRKALKATGRKQVVLAGLETHVCVLQTALDLLEEGYEVFVVADAC 123 (157)
T ss_pred HHHHHHHHhcCCCEEEEEEeeccHHHHHHHHHHHHCCCEEEEEeeCC
Confidence 46778889999999999999998777776654444446655555543
Done!