Query 021429
Match_columns 312
No_of_seqs 195 out of 1536
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 04:01:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021429.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021429hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 8.6E-41 2.9E-45 316.4 19.3 221 70-312 16-272 (413)
2 3psg_A Pepsinogen; hydrolase(a 100.0 1.3E-39 4.6E-44 304.3 20.7 187 70-295 52-250 (370)
3 2x0b_A Renin; hydrolase-hormon 100.0 1.9E-40 6.6E-45 311.0 14.3 182 70-294 57-259 (383)
4 1b5f_A Protein (cardosin A); h 100.0 1.1E-39 3.8E-44 287.4 15.0 195 70-312 9-217 (239)
5 2apr_A Rhizopuspepsin; hydrola 100.0 8E-39 2.8E-43 294.1 18.4 183 70-291 11-207 (325)
6 1tzs_A Cathepsin E; hydrolase, 100.0 4.9E-38 1.7E-42 291.9 20.2 189 61-294 14-218 (351)
7 4aa9_A Chymosin; hydrolase, as 100.0 2.1E-38 7E-43 290.7 16.6 185 70-296 7-205 (320)
8 3cms_A Chymosin B; hydrolase, 100.0 9.8E-39 3.4E-43 293.3 14.5 185 70-296 10-208 (323)
9 1mpp_A Pepsin; hydrolase(acid 100.0 5.5E-38 1.9E-42 292.5 18.6 184 70-294 14-226 (361)
10 1dpj_A Proteinase A; proteinas 100.0 3.7E-38 1.3E-42 290.2 16.4 184 70-295 9-210 (329)
11 1qdm_A Prophytepsin; aspartic 100.0 5.6E-38 1.9E-42 301.9 18.2 201 60-312 42-260 (478)
12 3c9x_A Trichoderma reesei aspa 100.0 5.2E-38 1.8E-42 289.2 16.9 185 71-294 12-210 (329)
13 1am5_A Pepsin, acid proteinase 100.0 4.5E-38 1.5E-42 289.0 16.4 184 70-294 8-205 (324)
14 3aup_A SBG7S, BG, basic 7S glo 100.0 1.1E-37 3.8E-42 294.5 19.3 220 70-312 17-266 (403)
15 1htr_B Gastricsin; aspartyl pr 100.0 1.7E-37 5.8E-42 285.7 18.4 183 71-294 9-206 (329)
16 1oew_A Endothiapepsin; hydrola 100.0 8E-38 2.7E-42 288.0 16.0 183 72-294 13-209 (329)
17 1j71_A Candidapepsin, aspartic 100.0 3E-37 1E-41 284.7 17.5 192 72-303 10-220 (334)
18 3k1w_A Renin; protease, altern 100.0 1.1E-37 3.9E-42 288.1 14.5 187 70-295 14-217 (341)
19 2qzx_A Candidapepsin-5; aspart 100.0 4.1E-37 1.4E-41 284.7 18.2 192 72-303 10-220 (342)
20 3pvk_A Candidapepsin-2; hydrol 100.0 1E-36 3.4E-41 281.9 18.2 192 72-303 10-220 (342)
21 1miq_A Plasmepsin; aspartic pr 100.0 3E-37 1E-41 288.9 13.7 179 70-293 58-254 (375)
22 3fv3_A SAPP1P-secreted asparti 100.0 2.3E-36 7.8E-41 279.2 18.9 178 72-296 10-214 (339)
23 3qvc_A Histo-aspartic protease 100.0 7.6E-37 2.6E-41 291.8 15.4 177 70-291 133-327 (451)
24 2bju_A Plasmepsin II; aspartic 100.0 4.7E-37 1.6E-41 293.0 13.7 179 70-291 134-328 (453)
25 3lpj_A Beta-secretase 1; alzhe 100.0 3.7E-36 1.3E-40 288.3 18.9 198 71-312 71-291 (455)
26 2ewy_A Beta-secretase 2; BACE2 100.0 6.7E-36 2.3E-40 280.5 17.6 198 71-312 10-227 (383)
27 2qp8_A Beta-secretase 1; BACE1 100.0 1.4E-35 4.8E-40 279.5 18.7 196 72-312 19-238 (395)
28 1yg9_A Aspartic protease BLA G 100.0 6.2E-36 2.1E-40 275.5 15.3 182 70-294 13-210 (330)
29 3vf3_A Beta-secretase 1; struc 100.0 2.4E-35 8.2E-40 278.5 19.6 197 72-312 26-245 (402)
30 1t6e_X Xylanase inhibitor; two 100.0 2.2E-35 7.6E-40 276.9 17.9 205 70-312 10-236 (381)
31 1ibq_A Aspergillopepsin; aspar 100.0 2.5E-35 8.6E-40 270.8 17.6 180 72-294 12-205 (325)
32 1izd_A Aspartic proteinase; su 100.0 8.4E-35 2.9E-39 267.2 15.7 178 72-293 13-204 (323)
33 1bxo_A Protein (penicillopepsi 100.0 1.2E-34 4.3E-39 266.0 13.3 176 72-290 13-202 (323)
34 1wkr_A Polyporopepsin; hydrola 100.0 1.5E-33 5.1E-38 260.5 16.7 167 73-294 11-204 (340)
35 1lya_A Cathepsin D; lysosomal 99.9 7.2E-24 2.5E-28 159.9 6.0 84 70-183 9-96 (97)
36 1lya_B Cathepsin D; lysosomal 99.7 4.2E-16 1.4E-20 136.6 11.2 98 193-293 4-115 (241)
37 2hs1_A HIV-1 protease; ultra-h 89.1 0.49 1.7E-05 34.7 4.4 29 76-106 9-37 (99)
38 1fmb_A EIAV protease; hydrolas 88.1 0.5 1.7E-05 35.0 3.9 28 75-104 8-35 (104)
39 3ec0_A Protease; HIV-2, inhibi 87.1 0.76 2.6E-05 33.6 4.4 29 76-106 9-37 (99)
40 2i1a_A DNA damage-inducible pr 85.1 0.83 2.8E-05 35.7 4.0 31 72-104 23-53 (148)
41 3liy_A Protease; hydrolase, hy 84.7 0.79 2.7E-05 34.3 3.4 31 77-107 12-45 (116)
42 2hah_A Protease, retropepsin; 81.6 1.3 4.6E-05 33.3 3.7 27 75-104 14-40 (116)
43 3s8i_A Protein DDI1 homolog 1; 79.9 1.5 5.3E-05 34.4 3.7 32 72-105 21-52 (148)
44 3sqf_A Protease; folded monome 78.9 2 6.7E-05 32.2 3.8 31 75-107 9-39 (114)
45 3slz_A GAG-Pro-POL polyprotein 73.9 3.9 0.00014 31.4 4.4 32 73-106 20-51 (132)
46 2rsp_A RSV protease; hydrolase 67.7 5.3 0.00018 30.3 3.8 23 82-106 27-49 (124)
47 3ka2_A [L-Ala51;Gly51']HIV-1 p 66.0 5.2 0.00018 33.1 3.8 28 75-104 8-35 (203)
48 3ka2_A [L-Ala51;Gly51']HIV-1 p 46.1 23 0.0008 29.2 4.5 28 75-104 112-139 (203)
49 1b5f_A Protein (cardosin A); h 31.1 44 0.0015 27.8 4.1 31 74-104 188-226 (239)
50 1lya_B Cathepsin D; lysosomal 24.2 69 0.0023 26.4 4.0 33 74-106 99-138 (241)
51 3c9x_A Trichoderma reesei aspa 21.4 62 0.0021 28.3 3.3 34 73-106 192-231 (329)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=8.6e-41 Score=316.41 Aligned_cols=221 Identities=23% Similarity=0.360 Sum_probs=181.0
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccCcccCCCCCCccceecCCCccccCCCCCCC
Q 021429 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPL 149 (312)
Q Consensus 70 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~c~~C~~~~~~~~~~~~f~~~~Sst~~~v~c~~~~C~~~~~~~~ 149 (312)
+..+++|+++|.||||+|+|.|+|||||+++||+|..| .+|+||+.++|.++.|....+...
T Consensus 16 d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c------------------~~Sst~~~v~C~s~~C~~~~~~~~ 77 (413)
T 3vla_A 16 DASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN------------------YVSSTYRPVRCRTSQCSLSGSIAC 77 (413)
T ss_dssp CTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS------------------CCCTTCEECBTTSHHHHHTTCCEE
T ss_pred cCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC------------------CCCCCcCccCCCcccccccccCCC
Confidence 34689999999999999999999999999999998764 378999999999999987765322
Q ss_pred --------CCCCCCCCCccEEEe-CCCCceeEEEEEEEEEEecccCCcc-ccccccceEEEeEEeccCCCCCCCccccce
Q 021429 150 --------TDCTANTSCPYLEIY-GDGSSTTGYFVQDVVQYDKVSGDLQ-TTSTNGSLIFGCGARQSGNLDSTNEEALDG 219 (312)
Q Consensus 150 --------~~C~~~~~~~~~~~Y-~~g~~~~G~~~~D~l~~~~~~~~~~-~~~~~~~~~fg~~~~~~~~~~~~~~~~~~G 219 (312)
..|. ++.|.|.+.| ++++.+.|++++|+|+|+...+... ....++++.|||++...+.. ....+||
T Consensus 78 ~~c~s~~~~~c~-~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g---~~~~~dG 153 (413)
T 3vla_A 78 GDCFNGPRPGCN-NNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQN---LASGVVG 153 (413)
T ss_dssp ECCSSCCBTTBC-SSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTT---SCTTCCE
T ss_pred cccccCCCCCCC-CCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccC---ccccccc
Confidence 2343 4579999999 4777779999999999986443321 11347889999999763211 1246899
Q ss_pred eeecCCCCCcHHHHHHhcCCCCCeeEEeecCC-CCcceEEeCCCCC---------CC-ceeecCCCCC------------
Q 021429 220 IIGFGKSNSSMISQLASSGGVRKMFAHCLDGI-NGGGIFAIGHVVQ---------PE-VNKTPLVPNQ------------ 276 (312)
Q Consensus 220 IlGLg~~~~s~~~~l~~~g~i~~~Fs~~l~~~-~~~G~l~fGg~d~---------~~-~~~~pl~~~~------------ 276 (312)
|||||++++|++.||+++++++++||+||.+. ..+|+|+||++|. ++ ++||||+.++
T Consensus 154 IlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~ 233 (413)
T 3vla_A 154 MAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEP 233 (413)
T ss_dssp EEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCC
T ss_pred ccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCC
Confidence 99999999999999999988889999999984 5679999999873 35 9999998653
Q ss_pred -CcEEEEEEEEEECCEEeccCCcccccC--CCCCeEEcC
Q 021429 277 -PHYSINMTAVQVGLDFLNLPTDVFGVG--DNKDNISAA 312 (312)
Q Consensus 277 -~~~~v~l~~i~vg~~~~~~~~~~~~~~--~~~~~iiDS 312 (312)
.+|+|.|++|+||++.+.+++..|... +++++||||
T Consensus 234 ~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDS 272 (413)
T 3vla_A 234 SVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKIST 272 (413)
T ss_dssp CCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECS
T ss_pred CceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEEC
Confidence 689999999999999999998888643 357899997
No 2
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=1.3e-39 Score=304.29 Aligned_cols=187 Identities=26% Similarity=0.430 Sum_probs=159.1
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccCcccCCCCCCccceecCCCccccCCCCCCC
Q 021429 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPL 149 (312)
Q Consensus 70 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~c~~C~~~~~~~~~~~~f~~~~Sst~~~v~c~~~~C~~~~~~~~ 149 (312)
++.+.+|+++|+||||||+|.|+|||||+++||+|..|..|. |..++.|||++|+||+.
T Consensus 52 n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~-----C~~~~~y~~~~SsT~~~---------------- 110 (370)
T 3psg_A 52 NYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLA-----CSDHNQFNPDDSSTFEA---------------- 110 (370)
T ss_dssp GGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGG-----GTTSCCBCGGGCTTCEE----------------
T ss_pred eccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCcc-----cCCCCCCCCccCcCcEE----------------
Confidence 788999999999999999999999999999999999997431 22348999999999998
Q ss_pred CCCCCCCCCccEEEeCCCCceeEEEEEEEEEEecccCCccccccccceEEEeEEeccCCCCCCCccccceeeecCCCCC-
Q 021429 150 TDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS- 228 (312)
Q Consensus 150 ~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~l~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~- 228 (312)
..|.|.+.|++|+ +.|.+++|+|+|++. .++++.|||++...+.+. ....+|||||||++..
T Consensus 111 ------~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~--------~v~~~~Fg~a~~~~~~~~--~~~~~dGIlGLg~~~~s 173 (370)
T 3psg_A 111 ------TSQELSITYGTGS-MTGILGYDTVQVGGI--------SDTNQIFGLSETEPGSFL--YYAPFDGILGLAYPSIS 173 (370)
T ss_dssp ------EEEEEEEESSSCE-EEEEEEEEEEEETTE--------EEEEEEEEEECSCCCGGG--GGCSCSEEEECSCGGGC
T ss_pred ------CCcEEEEEeCCce-EEEEEEEEEEeeCCc--------ccCCeEEEEEEeeccccc--ccCCccceeccCCcccc
Confidence 3568999999998 499999999999875 378899999998765322 1356899999999754
Q ss_pred -----cHHHHHHhcCCC-CCeeEEeecCC-CCcceEEeCCCCC----CCceeecCCCCCCcEEEEEEEEEECCEEecc
Q 021429 229 -----SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNL 295 (312)
Q Consensus 229 -----s~~~~l~~~g~i-~~~Fs~~l~~~-~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~v~l~~i~vg~~~~~~ 295 (312)
+++++|++||+| +++||+||.+. ..+|+|+|||+|+ ++++|+|+. .+.+|+|.|++|+|+++.+.+
T Consensus 174 ~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~-~~~~w~v~l~~i~v~g~~~~~ 250 (370)
T 3psg_A 174 ASGATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVS-VEGYWQITLDSITMDGETIAC 250 (370)
T ss_dssp GGGCCCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECS-EETTEEEEECEEESSSSEEEC
T ss_pred ccCCCCHHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeeccc-ccceeEEEEeEEEECCEEEec
Confidence 589999999999 89999999985 4589999999994 789999996 567999999999999988764
No 3
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=1.9e-40 Score=311.00 Aligned_cols=182 Identities=26% Similarity=0.463 Sum_probs=158.0
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC----CCCCCCCCCccCcccCCCCCCccceecCCCccccCCC
Q 021429 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK----ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVY 145 (312)
Q Consensus 70 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~c~----~C~~~~~~~~~~~~f~~~~Sst~~~v~c~~~~C~~~~ 145 (312)
++.+.+|+++|.||||+|+|.|+|||||+++||+|..|. .|.. |+.|||++|+||+.
T Consensus 57 n~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C~~-------~~~y~~~~SsT~~~------------ 117 (383)
T 2x0b_A 57 NYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVY-------HKLFDASDSSSYKH------------ 117 (383)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHHHT-------SCCBCGGGCTTCEE------------
T ss_pred ecCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCcccccC-------CCCCCCCCCCcEEE------------
Confidence 677899999999999999999999999999999999986 4654 47999999999997
Q ss_pred CCCCCCCCCCCCCccEEEeCCCCceeEEEEEEEEEEecccCCccccccccceEEEeEEeccCC-CCCCCccccceeeecC
Q 021429 146 GGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGN-LDSTNEEALDGIIGFG 224 (312)
Q Consensus 146 ~~~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~l~~~~~~~~~~~~~~~~~~~fg~~~~~~~~-~~~~~~~~~~GIlGLg 224 (312)
..|.|.+.|++|+ +.|.+++|+|+|++.. ++ +.|||++...+. |. ...+|||||||
T Consensus 118 ----------~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~--------v~-~~Fg~a~~~~g~~f~---~~~~dGIlGLg 174 (383)
T 2x0b_A 118 ----------NGTELTLRYSTGT-VSGFLSQDIITVGGIT--------VT-QMFGEVTEMPALPFM---LAEFDGVVGMG 174 (383)
T ss_dssp ----------EEEEEEEECSSCE-EEEEEEEEEEEETTEE--------EE-EEEEEEEECCHHHHT---TCSSSEEEECS
T ss_pred ----------CCcEEEEEcCCcc-EEEEEEeeEEEEcCce--------EE-EEEEEEEecCCcccc---cCCCceEeccC
Confidence 4678999999998 4999999999998753 67 999999987552 32 25689999999
Q ss_pred CCCC------cHHHHHHhcCCC-CCeeEEeecCC-C----CcceEEeCCCCC----CCceeecCCCCCCcEEEEEEEEEE
Q 021429 225 KSNS------SMISQLASSGGV-RKMFAHCLDGI-N----GGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQV 288 (312)
Q Consensus 225 ~~~~------s~~~~l~~~g~i-~~~Fs~~l~~~-~----~~G~l~fGg~d~----~~~~~~pl~~~~~~~~v~l~~i~v 288 (312)
++.. +++++|++||+| +++||+||++. . .+|+|+|||+|+ +++.|+|+. .+.+|+|.|++|+|
T Consensus 175 ~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~-~~~~w~v~l~~i~v 253 (383)
T 2x0b_A 175 FIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLI-KTGVWQIQMKGVSV 253 (383)
T ss_dssp CGGGCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBS-STTSCEEEECEEEE
T ss_pred CCccccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcC-CCceEEEEEeEEEe
Confidence 9865 489999999999 89999999886 2 279999999995 679999996 56799999999999
Q ss_pred CCEEec
Q 021429 289 GLDFLN 294 (312)
Q Consensus 289 g~~~~~ 294 (312)
+++.+.
T Consensus 254 ~~~~~~ 259 (383)
T 2x0b_A 254 GSSTLL 259 (383)
T ss_dssp SSCCCB
T ss_pred CCceEE
Confidence 998753
No 4
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=1.1e-39 Score=287.38 Aligned_cols=195 Identities=27% Similarity=0.430 Sum_probs=163.9
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC---CCCCCCCCCccCcccCCCCCCccceecCCCccccCCCC
Q 021429 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK---ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYG 146 (312)
Q Consensus 70 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~c~---~C~~~~~~~~~~~~f~~~~Sst~~~v~c~~~~C~~~~~ 146 (312)
++.+.+|+++|.||||+|++.|+|||||+++||+|..|. .|.. ++.|||++|+||+.
T Consensus 9 n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~-------~~~y~~~~SsT~~~------------- 68 (239)
T 1b5f_A 9 NDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRA-------HSMYESSDSSTYKE------------- 68 (239)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHT-------SCCBCGGGCTTCEE-------------
T ss_pred ecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCC-------CCCCCCccCCCeee-------------
Confidence 567899999999999999999999999999999999986 4654 37899999999997
Q ss_pred CCCCCCCCCCCCccEEEeCCCCceeEEEEEEEEEEecccCCccccccccceEEEeEEeccCC-CCCCCccccceeeecCC
Q 021429 147 GPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGN-LDSTNEEALDGIIGFGK 225 (312)
Q Consensus 147 ~~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~l~~~~~~~~~~~~~~~~~~~fg~~~~~~~~-~~~~~~~~~~GIlGLg~ 225 (312)
..|.|.+.|++|+. .|.+++|+|+|++. .++++.|||+....+. |.. ..++||||||+
T Consensus 69 ---------~~~~~~i~Yg~Gs~-~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~~~f~~---~~~~GilGLg~ 127 (239)
T 1b5f_A 69 ---------NGTFGAIIYGTGSI-TGFFSQDSVTIGDL--------VVKEQDFIEATDEADNVFLH---RLFDGILGLSF 127 (239)
T ss_dssp ---------EEEEEEEECSSCEE-EEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHTT---CSCCEEEECSC
T ss_pred ---------CCcEEEEEECCCcE-EEEEEEEEEEECCc--------EEccEEEEEEEeccCccccc---cCcceEEecCc
Confidence 35578999999984 89999999999875 3778999999876542 322 46799999999
Q ss_pred CCCc--HHHHHHhcCCC-CCeeEEeecCC---CCcceEEeCCCCC----CCceeecCCCCCCcEEEEEEEEEECCEEecc
Q 021429 226 SNSS--MISQLASSGGV-RKMFAHCLDGI---NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNL 295 (312)
Q Consensus 226 ~~~s--~~~~l~~~g~i-~~~Fs~~l~~~---~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~v~l~~i~vg~~~~~~ 295 (312)
+..+ ++++|++|++| +++||+||.+. ...|+|+||++|+ +++.|+|+. .+.+|.|.|++|+|+++.+.+
T Consensus 128 ~~~s~p~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~ 206 (239)
T 1b5f_A 128 QTISVPVWYNMLNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVT-YQYYWQFGIGDVLIGDKSTGF 206 (239)
T ss_dssp CSSSCCHHHHHHHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEE-EETTEEEEECCEEETTEECCT
T ss_pred cccccHHHHHHHHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEcc-cCCeEEEEeeEEEECCEEecc
Confidence 8765 78899999999 89999999874 3579999999985 568999996 457999999999999998765
Q ss_pred CCcccccCCCCCeEEcC
Q 021429 296 PTDVFGVGDNKDNISAA 312 (312)
Q Consensus 296 ~~~~~~~~~~~~~iiDS 312 (312)
... ..++||||
T Consensus 207 ~~~------~~~aiiDT 217 (239)
T 1b5f_A 207 CAP------GCQAFADS 217 (239)
T ss_dssp TTT------CEEEEECT
T ss_pred cCC------CCEEEEec
Confidence 421 34566665
No 5
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=8e-39 Score=294.15 Aligned_cols=183 Identities=27% Similarity=0.461 Sum_probs=158.7
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccCcccCCCCCCccceecCCCccccCCCCCCC
Q 021429 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPL 149 (312)
Q Consensus 70 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~c~~C~~~~~~~~~~~~f~~~~Sst~~~v~c~~~~C~~~~~~~~ 149 (312)
+..+.+|+++|.||||+|++.|+|||||+++||+|..|..| .+ .++.|||++|+||+.
T Consensus 11 ~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c-~~-----~~~~y~~~~SsT~~~---------------- 68 (325)
T 2apr_A 11 YGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC-GS-----GQTKYDPNQSSTYQA---------------- 68 (325)
T ss_dssp ETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC-CT-----TSCCBCGGGCTTCEE----------------
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH-hc-----CCCCCCcccCCCeee----------------
Confidence 34678999999999999999999999999999999999988 22 358999999999997
Q ss_pred CCCCCCCCCccEEEeCCCCceeEEEEEEEEEEecccCCccccccccceEEEeEEeccCCCCCCCccccceeeecCCCCC-
Q 021429 150 TDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS- 228 (312)
Q Consensus 150 ~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~l~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~- 228 (312)
..|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||++...+.|.. .+.+||||||+...
T Consensus 69 ------~~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~~~f~~---~~~~GilGLg~~~~s 131 (325)
T 2apr_A 69 ------DGRTWSISYGDGSSASGILAKDNVNLGGLL--------IKGQTIELAKREAASFAS---GPNDGLLGLGFDTIT 131 (325)
T ss_dssp ------EEEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHHT---SSCSEEEECSCGGGC
T ss_pred ------CCCEEEEEECCCCCEEEEEEEEEEEECCEE--------ECcEEEEEEeccCccccc---CCCceEEEeCCcccc
Confidence 356899999999977999999999998753 778999999987654432 35899999998754
Q ss_pred ------cHHHHHHhcCCC-CCeeEEeecCC--CCcceEEeCCCCC----CCceeecCCCCCCcEEEEEEEEEECCE
Q 021429 229 ------SMISQLASSGGV-RKMFAHCLDGI--NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLD 291 (312)
Q Consensus 229 ------s~~~~l~~~g~i-~~~Fs~~l~~~--~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~v~l~~i~vg~~ 291 (312)
+++++|++||+| +++||+||.+. ...|+|+||++|+ +++.|+|+...+.+|.|.|++|+||++
T Consensus 132 ~~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~~ 207 (325)
T 2apr_A 132 TVRGVKTPMDNLISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGTS 207 (325)
T ss_dssp SSTTCCCHHHHHHHTTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETTE
T ss_pred cccCCCCHHHHHHhcCCCCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECCE
Confidence 589999999999 89999999653 5679999999984 679999997667899999999999993
No 6
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=4.9e-38 Score=291.88 Aligned_cols=189 Identities=25% Similarity=0.409 Sum_probs=161.7
Q ss_pred CcCCCCCCCCCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC--CCCCCCCCCccCcccCCCCCCccceecCCC
Q 021429 61 DLPLGGSSRPDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQ 138 (312)
Q Consensus 61 ~~~~~~~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~c~--~C~~~~~~~~~~~~f~~~~Sst~~~v~c~~ 138 (312)
..|+. ++.+.+|+++|.||||+|++.|+|||||+++||+|..|. .|.. ++.|||++|+||+.
T Consensus 14 ~~~l~----n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~-------~~~y~~~~SsT~~~----- 77 (351)
T 1tzs_A 14 KEPLI----NYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKT-------HSRFQPSQSSTYSQ----- 77 (351)
T ss_dssp CCTTG----GGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTT-------SCCBCGGGCTTCBC-----
T ss_pred ceece----ecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCccccCC-------CCcCCcccCcceEE-----
Confidence 35555 667899999999999999999999999999999999997 5754 37999999999997
Q ss_pred ccccCCCCCCCCCCCCCCCCccEEEeCCCCceeEEEEEEEEEEecccCCccccccccceEEEeEEeccCCCCCCCccccc
Q 021429 139 EFCHGVYGGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALD 218 (312)
Q Consensus 139 ~~C~~~~~~~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~l~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~ 218 (312)
..|.|.+.|++|+ +.|.+++|+|+|++. .++++.|||++...+... ....++
T Consensus 78 -----------------~~~~~~i~Yg~Gs-~~G~~~~D~v~ig~~--------~~~~~~fg~~~~~~~~~~--~~~~~~ 129 (351)
T 1tzs_A 78 -----------------PGQSFSIQYGTGS-LSGIIGADQVSVEGL--------TVVGQQFGESVTEPGQTF--VDAEFD 129 (351)
T ss_dssp -----------------CSCEEEEESSSCE-EEEEEEEEEEEETTE--------EEEEEEEEEECSCCCGGG--GGCSCS
T ss_pred -----------------CCCEEEEEeCCCC-eEEEEEEeEEEECCe--------EECCeEEEEEEecccccc--ccCCCc
Confidence 5679999999998 489999999999875 377899999987755321 125679
Q ss_pred eeeecCCCCC------cHHHHHHhcCCC-CCeeEEeecCCC---CcceEEeCCCCC----CCceeecCCCCCCcEEEEEE
Q 021429 219 GIIGFGKSNS------SMISQLASSGGV-RKMFAHCLDGIN---GGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMT 284 (312)
Q Consensus 219 GIlGLg~~~~------s~~~~l~~~g~i-~~~Fs~~l~~~~---~~G~l~fGg~d~----~~~~~~pl~~~~~~~~v~l~ 284 (312)
||||||++.. +++++|++||+| +++||+||.+.. .+|+|+||++|+ +++.|+|+. .+.+|.|.|+
T Consensus 130 GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~ 208 (351)
T 1tzs_A 130 GILGLGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVT-KQAYWQIALD 208 (351)
T ss_dssp EEEECSCGGGSGGGCCCHHHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECS-EETTEEEEEE
T ss_pred eEEecCCccccccCCCcHHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecC-CCceEEEEeC
Confidence 9999999864 489999999999 899999998862 279999999984 689999996 4679999999
Q ss_pred EEEECCEEec
Q 021429 285 AVQVGLDFLN 294 (312)
Q Consensus 285 ~i~vg~~~~~ 294 (312)
+|+|+++.+.
T Consensus 209 ~i~v~~~~~~ 218 (351)
T 1tzs_A 209 NIQVGGTVMF 218 (351)
T ss_dssp EEEETTEEEE
T ss_pred EEEECCceEE
Confidence 9999998864
No 7
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=2.1e-38 Score=290.69 Aligned_cols=185 Identities=25% Similarity=0.438 Sum_probs=160.2
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC--CCCCCCCCCccCcccCCCCCCccceecCCCccccCCCCC
Q 021429 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (312)
Q Consensus 70 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~c~--~C~~~~~~~~~~~~f~~~~Sst~~~v~c~~~~C~~~~~~ 147 (312)
++.+.+|+++|.||||+|++.|+|||||+++||+|..|. .|.. ++.|||++|+||+.
T Consensus 7 n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~~C~~-------~~~y~~~~SsT~~~-------------- 65 (320)
T 4aa9_A 7 SYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVCKN-------HHRFDPRKSSTFRN-------------- 65 (320)
T ss_dssp -CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT-------SCCBCGGGCTTCEE--------------
T ss_pred eccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCCccccCC-------CCCCCCCCCcCeEc--------------
Confidence 778999999999999999999999999999999999997 4554 37999999999998
Q ss_pred CCCCCCCCCCCccEEEeCCCCceeEEEEEEEEEEecccCCccccccccceEEEeEEeccCC-CCCCCccccceeeecCCC
Q 021429 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGN-LDSTNEEALDGIIGFGKS 226 (312)
Q Consensus 148 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~l~~~~~~~~~~~~~~~~~~~fg~~~~~~~~-~~~~~~~~~~GIlGLg~~ 226 (312)
..|.|.+.|++|++ .|.+++|+|+|++. .++++.|||++...+. |.. ...+||||||++
T Consensus 66 --------~~~~~~i~Yg~gs~-~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~~~---~~~~GilGLg~~ 125 (320)
T 4aa9_A 66 --------LGKPLSIHYGTGSM-EGFLGYDTVTVSNI--------VDPNQTVGLSTEQPGEVFTY---SEFDGILGLAYP 125 (320)
T ss_dssp --------EEEEEEEEETTEEE-EEEEEEEEEEETTE--------EEEEEEEEEEEECCSHHHHS---CCCSEEEECSCG
T ss_pred --------CCcEEEEEECCcEE-EEEEEEEEEEECCE--------eecCeEEEEEEEcccccccc---cCcccEEecCcc
Confidence 35689999999984 99999999999875 3788999999987652 322 457999999987
Q ss_pred C------CcHHHHHHhcCCC-CCeeEEeecCCCCcceEEeCCCCC----CCceeecCCCCCCcEEEEEEEEEECCEEecc
Q 021429 227 N------SSMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNL 295 (312)
Q Consensus 227 ~------~s~~~~l~~~g~i-~~~Fs~~l~~~~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~v~l~~i~vg~~~~~~ 295 (312)
. .+++++|++||+| +++||+||.+....|+|+||++|+ +++.|+|+. .+.+|.|.|++|+|+++.+.+
T Consensus 126 ~~s~~~~~~~~~~l~~~g~i~~~~Fs~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~~~~ 204 (320)
T 4aa9_A 126 SLASEYSVPVFDNMMDRHLVARDLFSVYMDRNGQGSMLTLGAIDPSYYTGSLHWVPVT-LQQYWQFTVDSVTINGVAVAC 204 (320)
T ss_dssp GGSCTTCCCHHHHHHHTTCSSSSEEEEECCSSSSCCEEEETCCCGGGEEEEEEEEECS-SBTTBEEEECEEEETTEEEES
T ss_pred cccccCCCCHHHHHHhCCCCCCceEEEEeCCCCCCeEEEEcccCHHHccCceEEEEcc-cCCceEEEEeEEEECCEEecc
Confidence 4 3599999999999 899999999754689999999995 578999996 567999999999999998875
Q ss_pred C
Q 021429 296 P 296 (312)
Q Consensus 296 ~ 296 (312)
+
T Consensus 205 ~ 205 (320)
T 4aa9_A 205 V 205 (320)
T ss_dssp T
T ss_pred C
Confidence 4
No 8
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=9.8e-39 Score=293.31 Aligned_cols=185 Identities=23% Similarity=0.396 Sum_probs=159.3
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC--CCCCCCCCCccCcccCCCCCCccceecCCCccccCCCCC
Q 021429 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (312)
Q Consensus 70 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~c~--~C~~~~~~~~~~~~f~~~~Sst~~~v~c~~~~C~~~~~~ 147 (312)
++.+.+|+++|.||||+|++.|+|||||+++||+|..|. .|.. ++.|||++|+||+.
T Consensus 10 n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~-------~~~y~~~~SsT~~~-------------- 68 (323)
T 3cms_A 10 NYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKN-------HQRFDPRKSSTFQN-------------- 68 (323)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT-------SCCBCGGGCTTCEE--------------
T ss_pred eccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCCcccccC-------CCCCCCccCCCeEE--------------
Confidence 567899999999999999999999999999999999994 5754 37899999999997
Q ss_pred CCCCCCCCCCCccEEEeCCCCceeEEEEEEEEEEecccCCccccccccceEEEeEEeccC-CCCCCCccccceeeecCCC
Q 021429 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSG-NLDSTNEEALDGIIGFGKS 226 (312)
Q Consensus 148 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~l~~~~~~~~~~~~~~~~~~~fg~~~~~~~-~~~~~~~~~~~GIlGLg~~ 226 (312)
..|.|.+.|++|+ +.|.+++|+|+|++. .++++.|||++...+ .|. ....+||||||++
T Consensus 69 --------~~~~~~i~Yg~Gs-~~G~~~~D~v~ig~~--------~~~~~~fg~~~~~~~~~~~---~~~~~GilGLg~~ 128 (323)
T 3cms_A 69 --------LGKPLSIHYGTGS-MQGILGYDTVTVSNI--------VDIQQTVGLSTQEPGDFFT---YAEFDGILGMAYP 128 (323)
T ss_dssp --------EEEEEEEEETTEE-EEEEEEEEEEEETTE--------EEEEEEEEEEEECCSHHHH---HSSCSEEEECSCG
T ss_pred --------CCcEEEEEeCCCC-eEEEEEEEEEEECCe--------EEeccEEEEEEeccccccc---ccCCceEEecCcc
Confidence 3568999999998 599999999999875 377899999998755 222 1457999999997
Q ss_pred CC------cHHHHHHhcCCC-CCeeEEeecCCCCcceEEeCCCCC----CCceeecCCCCCCcEEEEEEEEEECCEEecc
Q 021429 227 NS------SMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNL 295 (312)
Q Consensus 227 ~~------s~~~~l~~~g~i-~~~Fs~~l~~~~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~v~l~~i~vg~~~~~~ 295 (312)
.. +++++|++||+| +++||+||.+....|+|+||++|+ +++.|+|+. .+.+|.|.|++|+|+++.+.+
T Consensus 129 ~~s~~~~~~~~~~l~~q~~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~ 207 (323)
T 3cms_A 129 SLASEYSIPVFDNMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDPSYYTGSLHWVPVT-VQQYWQFTVDSVTISGVVVAC 207 (323)
T ss_dssp GGSCTTCCCHHHHHHHTTCSSSSEEEEECCTTSSCEEEEESCCCGGGEEEEEEEEECS-SBTTBEEEEEEEEETTEEEES
T ss_pred hhhccCCCCHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCChhhccCceEEEECc-cCCeEEEEEeeEEECCEEeec
Confidence 54 589999999999 899999998864459999999995 578999996 467999999999999998765
Q ss_pred C
Q 021429 296 P 296 (312)
Q Consensus 296 ~ 296 (312)
+
T Consensus 208 ~ 208 (323)
T 3cms_A 208 E 208 (323)
T ss_dssp T
T ss_pred C
Confidence 3
No 9
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=5.5e-38 Score=292.52 Aligned_cols=184 Identities=25% Similarity=0.385 Sum_probs=159.6
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC---CCCCCCCCCccCcccCCCCCCccceecCCCccccCCCC
Q 021429 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK---ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYG 146 (312)
Q Consensus 70 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~c~---~C~~~~~~~~~~~~f~~~~Sst~~~v~c~~~~C~~~~~ 146 (312)
++.+.+|+++|.||||+|++.|+|||||+++||+|..|. .|..+ +.|||++|+||+.
T Consensus 14 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~~-------~~y~~~~SsT~~~------------- 73 (361)
T 1mpp_A 14 DFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGK-------RFFDPSSSSTFKE------------- 73 (361)
T ss_dssp ETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSS-------CCBCGGGCTTCEE-------------
T ss_pred cCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCCC-------CcCCCccCCceEe-------------
Confidence 567899999999999999999999999999999999998 67654 7899999999997
Q ss_pred CCCCCCCCCCCCccEEEeCCCCceeEEEEEEEEEEecccCCccccccccceEEEeEEeccC------CCCCCCcccccee
Q 021429 147 GPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSG------NLDSTNEEALDGI 220 (312)
Q Consensus 147 ~~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~l~~~~~~~~~~~~~~~~~~~fg~~~~~~~------~~~~~~~~~~~GI 220 (312)
..|.|.+.|++|+ +.|.+++|+|+|++. .++++.|||++...+ .|. ....+||
T Consensus 74 ---------~~~~~~i~Yg~Gs-~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~~~~~~~~~~---~~~~~Gi 132 (361)
T 1mpp_A 74 ---------TDYNLNITYGTGG-ANGIYFRDSITVGGA--------TVKQQTLAYVDNVSGPTAEQSPDS---ELFLDGI 132 (361)
T ss_dssp ---------EEEEEEEECSSCE-EEEEEEEEEEEETTE--------EEEEEEEEEEEEEESGGGSSCTTC---SSCCCEE
T ss_pred ---------cCCeEEEEECCce-EEEEEEEEEEEECCE--------EEeceEEEEEEeccCccccccccc---cCCCCCE
Confidence 3568999999998 599999999999875 378899999998765 232 2568999
Q ss_pred eecCCCC------------CcHHHHHHhcCCC-CCeeEEeecCCCCcceEEeCCCCC----CCceeecCCCCCC---cEE
Q 021429 221 IGFGKSN------------SSMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQ----PEVNKTPLVPNQP---HYS 280 (312)
Q Consensus 221 lGLg~~~------------~s~~~~l~~~g~i-~~~Fs~~l~~~~~~G~l~fGg~d~----~~~~~~pl~~~~~---~~~ 280 (312)
||||++. .+++++|++||+| +++||+||.+....|.|+||++|+ +++.|+|+..... +|.
T Consensus 133 lGLg~~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~ 212 (361)
T 1mpp_A 133 FGAAYPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTNDGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWD 212 (361)
T ss_dssp EECSCGGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCSSSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEE
T ss_pred EEeCCcccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCCCCCcEEEEecCChhhcCCceEEEEcccCCCceeEEE
Confidence 9999874 4588899999999 899999998754579999999984 6899999975544 899
Q ss_pred EEEEEEEECCEEec
Q 021429 281 INMTAVQVGLDFLN 294 (312)
Q Consensus 281 v~l~~i~vg~~~~~ 294 (312)
|.|++|+|+++.+.
T Consensus 213 v~l~~i~v~~~~~~ 226 (361)
T 1mpp_A 213 APVTGVKIDGSDAV 226 (361)
T ss_dssp EEEEEEEETTEEEE
T ss_pred EEEeEEEECCeeec
Confidence 99999999998875
No 10
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=3.7e-38 Score=290.18 Aligned_cols=184 Identities=26% Similarity=0.460 Sum_probs=158.4
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCC--CCCCCCCCccCcccCCCCCCccceecCCCccccCCCCC
Q 021429 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKE--CPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (312)
Q Consensus 70 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~c~~--C~~~~~~~~~~~~f~~~~Sst~~~v~c~~~~C~~~~~~ 147 (312)
++.+.+|+++|.||||+|++.|+|||||+++||+|..|.. |..+ +.|||++|+||+.
T Consensus 9 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~-------~~y~~~~SsT~~~-------------- 67 (329)
T 1dpj_A 9 NYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLH-------SKYDHEASSSYKA-------------- 67 (329)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS-------CCBCGGGCTTCEE--------------
T ss_pred ecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCcccCCc-------CcCCcccCcCeEE--------------
Confidence 5678999999999999999999999999999999999986 6543 7899999999997
Q ss_pred CCCCCCCCCCCccEEEeCCCCceeEEEEEEEEEEecccCCccccccccceEEEeEEeccC-CCCCCCccccceeeecCCC
Q 021429 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSG-NLDSTNEEALDGIIGFGKS 226 (312)
Q Consensus 148 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~l~~~~~~~~~~~~~~~~~~~fg~~~~~~~-~~~~~~~~~~~GIlGLg~~ 226 (312)
..|.|.+.|++|+ +.|.+++|+|+|++. .++++.|||++...+ .|.. ...+||||||+.
T Consensus 68 --------~~~~~~i~Yg~Gs-~~G~~~~D~v~ig~~--------~~~~~~fg~~~~~~~~~f~~---~~~~GilGLg~~ 127 (329)
T 1dpj_A 68 --------NGTEFAIQYGTGS-LEGYISQDTLSIGDL--------TIPKQDFAEATSEPGLTFAF---GKFDGILGLGYD 127 (329)
T ss_dssp --------EEEEEEEEETTEE-EEEEEEEEEEEETTE--------EEEEEEEEEEEECCHHHHTT---CSCSEEEECSCG
T ss_pred --------CCcEEEEEECCce-EEEEEEEEEEEECCe--------EECCeEEEEEEecCcccccc---CCcceEEEeCCc
Confidence 4678999999995 599999999999875 378899999998755 2322 467999999997
Q ss_pred CC------cHHHHHHhcCCC-CCeeEEeecCCC----CcceEEeCCCCC----CCceeecCCCCCCcEEEEEEEEEECCE
Q 021429 227 NS------SMISQLASSGGV-RKMFAHCLDGIN----GGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLD 291 (312)
Q Consensus 227 ~~------s~~~~l~~~g~i-~~~Fs~~l~~~~----~~G~l~fGg~d~----~~~~~~pl~~~~~~~~v~l~~i~vg~~ 291 (312)
.. +++++|++||+| +++||+||.+.. .+|+|+||++|+ +++.|+|+. .+.+|.|.|++|+|+++
T Consensus 128 ~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~ 206 (329)
T 1dpj_A 128 TISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVR-RKAYWEVKFEGIGLGDE 206 (329)
T ss_dssp GGCGGGCCCHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECS-SBTTBEEEEEEEEETTE
T ss_pred hhhccCCCCHHHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcC-CCceEEEEeeeEEECCe
Confidence 65 478999999999 899999997641 379999999995 578999996 46799999999999999
Q ss_pred Eecc
Q 021429 292 FLNL 295 (312)
Q Consensus 292 ~~~~ 295 (312)
.+..
T Consensus 207 ~~~~ 210 (329)
T 1dpj_A 207 YAEL 210 (329)
T ss_dssp EEEC
T ss_pred EecC
Confidence 8763
No 11
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=5.6e-38 Score=301.95 Aligned_cols=201 Identities=26% Similarity=0.398 Sum_probs=166.4
Q ss_pred cCcCCCCCCCCCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC---CCCCCCCCCccCcccCCCCCCccceecC
Q 021429 60 VDLPLGGSSRPDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK---ECPRRSSLGIELTLYDIKDSSTGKFVTC 136 (312)
Q Consensus 60 ~~~~~~~~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~c~---~C~~~~~~~~~~~~f~~~~Sst~~~v~c 136 (312)
...|+. ++.+.+|+++|.||||+|+|.|+|||||+++||+|..|. .|.. ++.|||++|+||+.
T Consensus 42 ~~~~l~----n~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~~~~C~~-------~~~y~~~~SsT~~~--- 107 (478)
T 1qdm_A 42 DIVALK----NYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYL-------HSRYKAGASSTYKK--- 107 (478)
T ss_dssp CSGGGC----CGGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGGGG-------SCCBCGGGCTTCBC---
T ss_pred ceEEeE----eccCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCCCccccC-------CCCCCcccCCCeee---
Confidence 345665 567899999999999999999999999999999999985 4654 47999999999987
Q ss_pred CCccccCCCCCCCCCCCCCCCCccEEEeCCCCceeEEEEEEEEEEecccCCccccccccceEEEeEEeccCC-CCCCCcc
Q 021429 137 DQEFCHGVYGGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGN-LDSTNEE 215 (312)
Q Consensus 137 ~~~~C~~~~~~~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~l~~~~~~~~~~~~~~~~~~~fg~~~~~~~~-~~~~~~~ 215 (312)
..|.|.+.|++|+ +.|.+++|+|+|++.. ++++.|||++...+. |. ..
T Consensus 108 -------------------~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~--------v~~~~Fg~a~~~~~~~f~---~~ 156 (478)
T 1qdm_A 108 -------------------NGKPAAIQYGTGS-IAGYFSEDSVTVGDLV--------VKDQEFIEATKEPGITFL---VA 156 (478)
T ss_dssp -------------------CCCEEEEEETTEE-EEEEEEEEEEEETTEE--------EEEEEEEEEEECCBSHHH---HC
T ss_pred -------------------CCcEEEEEcCCCC-eEEEEEEEEEEECCeE--------ECCEEEEEEEecCCcccc---cc
Confidence 5678999999998 5999999999998753 778999999986552 22 24
Q ss_pred ccceeeecCCCCC------cHHHHHHhcCCC-CCeeEEeecCC---CCcceEEeCCCCC----CCceeecCCCCCCcEEE
Q 021429 216 ALDGIIGFGKSNS------SMISQLASSGGV-RKMFAHCLDGI---NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSI 281 (312)
Q Consensus 216 ~~~GIlGLg~~~~------s~~~~l~~~g~i-~~~Fs~~l~~~---~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~v 281 (312)
.++||||||++.. +++++|++||+| +++||+||++. ..+|+|+||++|+ +++.|+|+. .+++|+|
T Consensus 157 ~~dGIlGLg~~~~s~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~-~~~~w~v 235 (478)
T 1qdm_A 157 KFDGILGLGFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVT-QKGYWQF 235 (478)
T ss_dssp SSSEEEECSCGGGCGGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEE-EETTEEE
T ss_pred cccceecccccccccCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEecc-CCCeEEE
Confidence 6799999999865 478999999999 89999999874 3479999999996 568999996 5679999
Q ss_pred EEEEEEECCEEeccCCcccccCCCCCeEEcC
Q 021429 282 NMTAVQVGLDFLNLPTDVFGVGDNKDNISAA 312 (312)
Q Consensus 282 ~l~~i~vg~~~~~~~~~~~~~~~~~~~iiDS 312 (312)
.|++|+|+++.+.++. .+.++||||
T Consensus 236 ~l~~i~v~g~~~~~~~------~~~~aiiDT 260 (478)
T 1qdm_A 236 DMGDVLVGGKSTGFCA------GGCAAIADS 260 (478)
T ss_dssp EECCEEETTEECSTTT------TCEEEEECS
T ss_pred EEeEEEECCEEEeecC------CCceEEEcC
Confidence 9999999999876542 134566665
No 12
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=5.2e-38 Score=289.23 Aligned_cols=185 Identities=25% Similarity=0.363 Sum_probs=157.6
Q ss_pred CCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccCcccCCCCCCccceecCCCccccCCCCCCCC
Q 021429 71 DGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLT 150 (312)
Q Consensus 71 ~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~c~~C~~~~~~~~~~~~f~~~~Sst~~~v~c~~~~C~~~~~~~~~ 150 (312)
+.+.+|+++|.||||+|++.|+|||||+++||+|..|..|..+ .++.|||++|+||+.+
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~-----~~~~y~~~~SsT~~~~---------------- 70 (329)
T 3c9x_A 12 SADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKSSAT-----GHAIYTPSKSSTSKKV---------------- 70 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCHHHHT-----TSCCBCGGGCTTCEEC----------------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCCccccC-----CCCcCCcccCcCceEc----------------
Confidence 4678999999999999999999999999999999999876432 3479999999999974
Q ss_pred CCCCCCCCccEEEeCCCCceeEEEEEEEEEEecccCCccccccccceEEEeEEeccCCCCCCCccccceeeecCCCCC--
Q 021429 151 DCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS-- 228 (312)
Q Consensus 151 ~C~~~~~~~~~~~Y~~g~~~~G~~~~D~l~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~-- 228 (312)
+.|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||++...+.|.. ....+||||||+...
T Consensus 71 -----~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~~--~~~~~GilGLg~~~~s~ 135 (329)
T 3c9x_A 71 -----SGASWSISYGDGSSSSGDVYTDKVTIGGF--------SVNTQGVESATRVSTEFVQ--DTVISGLVGLAFDSGNQ 135 (329)
T ss_dssp -----TTCBEEEECTTSCEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHH--CTTCCEEEECSCGGGCC
T ss_pred -----CCCeEEEEeCCCCcEEEEEEEEEEEECCE--------EEcceEEEEEEecCccccc--cCCCceeEEeCcccccc
Confidence 35689999999997799999999999875 3788999999987654321 136799999998643
Q ss_pred -------cHHHHHHhcCCC-CCeeEEeecCCCCcceEEeCCCCC----CCceeecCCCCCCcEEEEEEEEEECCEEec
Q 021429 229 -------SMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLN 294 (312)
Q Consensus 229 -------s~~~~l~~~g~i-~~~Fs~~l~~~~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~v~l~~i~vg~~~~~ 294 (312)
+++++|+++ | +++||+||.+ +..|+|+||++|+ +++.|+|+...+.+|.|.|++|+|+++.+.
T Consensus 136 ~~~~~~~~~~~~l~~~--i~~~~FS~~l~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~ 210 (329)
T 3c9x_A 136 VRPHPQKTWFSNAASS--LAEPLFTADLRH-GQNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKLN 210 (329)
T ss_dssp CBSSCCCCHHHHHHTT--SSSSEEEEECCS-SSCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCCC
T ss_pred cCCCCCCCHHHHHHHh--cCCCEEEEEecC-CCCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEecc
Confidence 489999986 6 8999999987 4689999999984 689999998667899999999999998764
No 13
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=4.5e-38 Score=289.02 Aligned_cols=184 Identities=24% Similarity=0.421 Sum_probs=159.3
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC--CCCCCCCCCccCcccCCCCCCccceecCCCccccCCCCC
Q 021429 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (312)
Q Consensus 70 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~c~--~C~~~~~~~~~~~~f~~~~Sst~~~v~c~~~~C~~~~~~ 147 (312)
++.+.+|+++|.||||+|++.|+|||||+++||+|..|. .|.. ++.|||++|+||+.
T Consensus 8 n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~-------~~~y~~~~SsT~~~-------------- 66 (324)
T 1am5_A 8 NEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACSN-------HNKFKPRQSSTYVE-------------- 66 (324)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHHHT-------SCCBCGGGCTTCEE--------------
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccccC-------CCcCCCccCCCeEe--------------
Confidence 567899999999999999999999999999999999997 4654 37899999999997
Q ss_pred CCCCCCCCCCCccEEEeCCCCceeEEEEEEEEEEecccCCccccccccceEEEeEEeccCCCCCCCccccceeeecCCCC
Q 021429 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (312)
Q Consensus 148 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~l~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~ 227 (312)
..|.|.+.|++|+. .|.+++|+|+|++. .++++.|||++...+.+.. ....+||||||++.
T Consensus 67 --------~~~~~~i~Yg~Gs~-~G~~~~D~v~~g~~--------~~~~~~fg~~~~~~~~~~~--~~~~~GilGLg~~~ 127 (324)
T 1am5_A 67 --------TGKTVDLTYGTGGM-RGILGQDTVSVGGG--------SDPNQELGESQTEPGPFQA--AAPFDGILGLAYPS 127 (324)
T ss_dssp --------EEEEEEEECSSCEE-EEEEEEEEEESSSS--------CEEEEEEEEEEECCSTTTT--TCSSSEEEECSCGG
T ss_pred --------CCcEEEEEECCCCe-EEEEEECceeECCc--------EEcccEEEEEEeccccccc--CCCCceEEecCCcc
Confidence 35689999999987 99999999999874 3788999999987653221 25689999999975
Q ss_pred C------cHHHHHHhcCCC-CCeeEEeecCC-CCcceEEeCCCCC----CCceeecCCCCCCcEEEEEEEEEECCEEec
Q 021429 228 S------SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLN 294 (312)
Q Consensus 228 ~------s~~~~l~~~g~i-~~~Fs~~l~~~-~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~v~l~~i~vg~~~~~ 294 (312)
. +++++|++||+| +++||+||.+. ...|+|+||++|+ +++.|+|+. .+.+|.|.|++|+|+++.+.
T Consensus 128 ~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~ 205 (324)
T 1am5_A 128 IAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVT-AEKYWQVALDGITVNGQTAA 205 (324)
T ss_dssp GCGGGCCCHHHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEE-EETTEEEEECEEEETTEECC
T ss_pred ccccCCCchHHhHHhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecC-CCcEEEEEEeEEEECCceee
Confidence 4 589999999999 89999999885 3489999999984 689999996 46799999999999998864
No 14
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=1.1e-37 Score=294.54 Aligned_cols=220 Identities=21% Similarity=0.335 Sum_probs=170.2
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccCcccCCCCCCccceecCCCccccCCCCCC-
Q 021429 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGP- 148 (312)
Q Consensus 70 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~c~~C~~~~~~~~~~~~f~~~~Sst~~~v~c~~~~C~~~~~~~- 148 (312)
++.+++|+++|.||||+|++.|+|||||+++||+|.+| .+|+||+.++|.+..|....++.
T Consensus 17 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~------------------~~Sst~~~~~C~s~~C~~~~~~~c 78 (403)
T 3aup_A 17 DGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQ------------------YSSKTYQAPFCHSTQCSRANTHQC 78 (403)
T ss_dssp CTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSC------------------CCCSSCBCCCTTBHHHHHTTCCCE
T ss_pred CCCCceEEEEEECCCCCceeEEEEECCCCceeECCCCC------------------CCCCCCCccCCCCccccCccccCc
Confidence 34689999999999999999999999999999998663 47899999999999998766431
Q ss_pred -------CCCCCCCCCCccEEEeC-CCCceeEEEEEEEEEEecccCCc---cccccccceEEEeEEeccCC-CCCCCccc
Q 021429 149 -------LTDCTANTSCPYLEIYG-DGSSTTGYFVQDVVQYDKVSGDL---QTTSTNGSLIFGCGARQSGN-LDSTNEEA 216 (312)
Q Consensus 149 -------~~~C~~~~~~~~~~~Y~-~g~~~~G~~~~D~l~~~~~~~~~---~~~~~~~~~~fg~~~~~~~~-~~~~~~~~ 216 (312)
...|. ++.|.|.+.|+ +++.+.|.+++|+|+|++..+.. .....++++.|||++...+. +. ...
T Consensus 79 ~~c~~~~~s~~~-~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~---~~~ 154 (403)
T 3aup_A 79 LSCPAASRPGCH-KNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGL---PRN 154 (403)
T ss_dssp EECSSSCBTTBC-SSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSS---STT
T ss_pred cccCCCCCCCCC-CCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCC---CCC
Confidence 23353 36799999998 77777999999999998743221 00124788999999986433 22 256
Q ss_pred cceeeecCCCCCcHHHHHHhcCCCCCeeEEeecCC-CCcceEEeCCCCC-------C-----CceeecCCCC-CCcEEEE
Q 021429 217 LDGIIGFGKSNSSMISQLASSGGVRKMFAHCLDGI-NGGGIFAIGHVVQ-------P-----EVNKTPLVPN-QPHYSIN 282 (312)
Q Consensus 217 ~~GIlGLg~~~~s~~~~l~~~g~i~~~Fs~~l~~~-~~~G~l~fGg~d~-------~-----~~~~~pl~~~-~~~~~v~ 282 (312)
++||||||++..+++.||++..+.+++||+||.+. ..+|+|+||+ |+ + ++.|+|++.+ ..+|+|.
T Consensus 155 ~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~~~~y~v~ 233 (403)
T 3aup_A 155 TQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITLQGEYNVR 233 (403)
T ss_dssp CCEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECTTSCEEEC
T ss_pred CceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-CchhccccccccccCceeecccccCCCCcceEE
Confidence 89999999999999999976544489999999875 5689999999 62 3 8999999765 3699999
Q ss_pred EEEEEECCEEe-ccCCcccc--cCCCCCeEEcC
Q 021429 283 MTAVQVGLDFL-NLPTDVFG--VGDNKDNISAA 312 (312)
Q Consensus 283 l~~i~vg~~~~-~~~~~~~~--~~~~~~~iiDS 312 (312)
|++|+|+++.+ .+++..|. ..+++++||||
T Consensus 234 l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDS 266 (403)
T 3aup_A 234 VNSIRINQHSVFPLNKISSTIVGSTSGGTMIST 266 (403)
T ss_dssp EEEEEETTEEEECC------------CCEEECS
T ss_pred EEEEEECCEEcccCChhHeeeccCCCCCEEEEC
Confidence 99999999999 88766653 33467899997
No 15
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=1.7e-37 Score=285.74 Aligned_cols=183 Identities=24% Similarity=0.458 Sum_probs=157.7
Q ss_pred CCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCC--CCCCCCCCccCcccCCCCCCccceecCCCccccCCCCCC
Q 021429 71 DGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKE--CPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGP 148 (312)
Q Consensus 71 ~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~c~~--C~~~~~~~~~~~~f~~~~Sst~~~v~c~~~~C~~~~~~~ 148 (312)
+.+.+|+++|.||||+|++.|+|||||+++||+|..|.. |..+ +.|||++|+||+.
T Consensus 9 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~-------~~y~~~~SsT~~~--------------- 66 (329)
T 1htr_B 9 YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTSH-------SRFNPSESSTYST--------------- 66 (329)
T ss_dssp GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS-------CCBCGGGCTTCEE---------------
T ss_pred EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCcccCCC-------CcCCCccCCCeEE---------------
Confidence 467899999999999999999999999999999999974 6543 7899999999997
Q ss_pred CCCCCCCCCCccEEEeCCCCceeEEEEEEEEEEecccCCccccccccceEEEeEEeccCCCCCCCccccceeeecCCCCC
Q 021429 149 LTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS 228 (312)
Q Consensus 149 ~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~l~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~ 228 (312)
..|.|.+.|++|+. .|.+++|+|+|++. .++++.|||++...+.+.. ....+||||||++..
T Consensus 67 -------~~~~~~i~Yg~gs~-~G~~~~D~v~~g~~--------~~~~~~fg~~~~~~~~~~~--~~~~~GilGLg~~~~ 128 (329)
T 1htr_B 67 -------NGQTFSLQYGSGSL-TGFFGYDTLTVQSI--------QVPNQEFGLSENEPGTNFV--YAQFDGIMGLAYPAL 128 (329)
T ss_dssp -------EEEEEEEEETTEEE-EEEEEEEEEEETTE--------EEEEEEEEEESSCSSGGGG--GCSCCEEEECCCCSC
T ss_pred -------CCcEEEEEeCCCCe-EEEEEeeeEEEcce--------EECceEEEEEEEccccccc--cCCCceEEecCCCcc
Confidence 35689999999986 99999999999875 3788999999987553211 256899999999865
Q ss_pred ------cHHHHHHhcCCC-CCeeEEeecCCC-C-cceEEeCCCCC----CCceeecCCCCCCcEEEEEEEEEECCEEec
Q 021429 229 ------SMISQLASSGGV-RKMFAHCLDGIN-G-GGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLN 294 (312)
Q Consensus 229 ------s~~~~l~~~g~i-~~~Fs~~l~~~~-~-~G~l~fGg~d~----~~~~~~pl~~~~~~~~v~l~~i~vg~~~~~ 294 (312)
+++++|++||+| +++||+||.+.. . +|+|+||++|+ +++.|+|+. .+.+|.|.|++|+|+++.+.
T Consensus 129 s~~~~~~~~~~l~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~ 206 (329)
T 1htr_B 129 SVDEATTAMQGMVQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVT-QELYWQIGIEEFLIGGQASG 206 (329)
T ss_dssp CCTTCCSHHHHHHHTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBC-SSSSCEEEECEEEETTEECC
T ss_pred cccCCCCHHHHHHhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECC-CCceEEEEEeEEEECCceee
Confidence 589999999999 899999998852 2 79999999995 578999996 46799999999999998864
No 16
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=8e-38 Score=287.98 Aligned_cols=183 Identities=22% Similarity=0.369 Sum_probs=156.5
Q ss_pred CceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccCcccCCCCCCccceecCCCccccCCCCCCCCC
Q 021429 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (312)
Q Consensus 72 ~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~c~~C~~~~~~~~~~~~f~~~~Sst~~~v~c~~~~C~~~~~~~~~~ 151 (312)
.+.+|+++|.||||+|++.|+|||||+++||+|..|..|.. .++.|||++|+||+.++
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~------~~~~y~~~~SsT~~~~~---------------- 70 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEV------XQTIYTPSKSTTAKLLS---------------- 70 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCGGGC-------CCCBCGGGCTTCEEEE----------------
T ss_pred CCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCcccc------ccCccCCccCccceecC----------------
Confidence 57899999999999999999999999999999999987753 24799999999999752
Q ss_pred CCCCCCCccEEEeCCCCceeEEEEEEEEEEecccCCccccccccceEEEeEEeccCCCCCCCccccceeeecCCCCC---
Q 021429 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS--- 228 (312)
Q Consensus 152 C~~~~~~~~~~~Y~~g~~~~G~~~~D~l~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~--- 228 (312)
.|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||++...+.+.. ....+||||||++..
T Consensus 71 -----~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~~~~~--~~~~~GilGLg~~~~s~~ 135 (329)
T 1oew_A 71 -----GATWSISYGDGSSSSGDVYTDTVSVGGL--------TVTGQAVESAKKVSSSFTE--DSTIDGLLGLAFSTLNTV 135 (329)
T ss_dssp -----EEEEEEECTTSCEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHH--CTTCCEEEECSCGGGCCC
T ss_pred -----CCeEEEEeCCCCcEEEEEEEEEEEECCE--------EEeeeEEEEEEecCccccc--cCCCceEEEecccccccc
Confidence 4589999999997799999999999875 3788999999987654321 135799999998743
Q ss_pred ------cHHHHHHhcCCC-CCeeEEeecCCCCcceEEeCCCCC----CCceeecCCCCCCcEEEEEEEEEECCEEec
Q 021429 229 ------SMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLN 294 (312)
Q Consensus 229 ------s~~~~l~~~g~i-~~~Fs~~l~~~~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~v~l~~i~vg~~~~~ 294 (312)
+++++|+++ | +++||+||.+ +..|+|+||++|+ +++.|+|+...+.+|.|.|++|+|+++.+.
T Consensus 136 ~~~~~~~~~~~l~~~--i~~~~FS~~L~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~ 209 (329)
T 1oew_A 136 SPTQQKTFFDNAKAS--LDSPVFTADLGY-HAPGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFK 209 (329)
T ss_dssp BSSCCCCHHHHHTTT--SSSSEEEEECCS-SSCEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCE
T ss_pred CcCCCCCHHHHHHHh--ccCcEEEEEccC-CCCeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeecc
Confidence 489999987 6 8999999987 4689999999984 679999998667899999999999998654
No 17
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=3e-37 Score=284.71 Aligned_cols=192 Identities=20% Similarity=0.298 Sum_probs=160.0
Q ss_pred CceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCC--CCCCCCC--CCCCCccCcccCCCCCCccceecCCCccccCCCCC
Q 021429 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCI--QCKECPR--RSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (312)
Q Consensus 72 ~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~--~c~~C~~--~~~~~~~~~~f~~~~Sst~~~v~c~~~~C~~~~~~ 147 (312)
.+.+|+++|.||||+|++.|+|||||+++||+|. .|..|.. ....|..++.|||++|+||+.
T Consensus 10 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~-------------- 75 (334)
T 1j71_A 10 EGPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQN-------------- 75 (334)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEE--------------
T ss_pred CCcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCccc--------------
Confidence 3689999999999999999999999999999976 6765421 122355668999999999997
Q ss_pred CCCCCCCCCCCccEEEeCCCCceeEEEEEEEEEEecccCCccccccccceEEEeEEeccCCCCCCCccccceeeecCCCC
Q 021429 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (312)
Q Consensus 148 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~l~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~ 227 (312)
..|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||++... ..+||||||+..
T Consensus 76 --------~~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~--------~~~~~~fg~~~~~~---------~~~GilGLg~~~ 130 (334)
T 1j71_A 76 --------LNQDFSIEYGDLTSSQGSFYKDTVGFGGI--------SIKNQQFADVTTTS---------VDQGIMGIGFTA 130 (334)
T ss_dssp --------EEEEEEEEBTTSCEEEEEEEEEEEEETTE--------EEEEEEEEEEEEES---------SSSCEEECSCGG
T ss_pred --------CCCceEEEECCCCEEEEEEEEEEEEECCE--------EEccEEEEEEEecC---------CCccEEEEcCCc
Confidence 35689999999997799999999999874 37889999998762 368999999975
Q ss_pred C--------cHHHHHHhcCCC-CCeeEEeecCC-CCcceEEeCCCCC----CCceeecCCCCCCcEEEEEEEEEECCEEe
Q 021429 228 S--------SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFL 293 (312)
Q Consensus 228 ~--------s~~~~l~~~g~i-~~~Fs~~l~~~-~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~v~l~~i~vg~~~~ 293 (312)
. +|+++|++||+| +++||+||.+. ...|+|+||++|+ +++.|+|+.. ..+|.|.|++|+|+++.+
T Consensus 131 ~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~-~~~~~v~l~~i~v~g~~~ 209 (334)
T 1j71_A 131 DEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVTS-SVELRVHLGSINFDGTSV 209 (334)
T ss_dssp GSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECCC-SSSCEEEEEEEEETTEEE
T ss_pred ccCccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEccC-CCeEEEEEeEEEECCEec
Confidence 4 799999999999 89999999874 5679999999986 4689999974 469999999999999988
Q ss_pred ccC-CcccccC
Q 021429 294 NLP-TDVFGVG 303 (312)
Q Consensus 294 ~~~-~~~~~~~ 303 (312)
..+ ..++|+|
T Consensus 210 ~~~~~~iiDSG 220 (334)
T 1j71_A 210 STNADVVLDSG 220 (334)
T ss_dssp EEEEEEEECTT
T ss_pred cCCccEEEeCC
Confidence 654 3444544
No 18
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=1.1e-37 Score=288.12 Aligned_cols=187 Identities=25% Similarity=0.426 Sum_probs=158.6
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccCcccCCCCCCccceecCCCccccCCCCCCC
Q 021429 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPL 149 (312)
Q Consensus 70 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~c~~C~~~~~~~~~~~~f~~~~Sst~~~v~c~~~~C~~~~~~~~ 149 (312)
++.+.+|+++|.||||+|++.|+|||||+++||+|..|..|.. .|..++.|||++|+||+.
T Consensus 14 n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~---~C~~~~~y~~~~SsT~~~---------------- 74 (341)
T 3k1w_A 14 NYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYT---ACVYHKLFDASDSSSYKH---------------- 74 (341)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCH---HHHTSCCBCGGGCTTCEE----------------
T ss_pred EccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCC---cccCCCCCCCCcCcCeeE----------------
Confidence 6678999999999999999999999999999999999873211 122348999999999997
Q ss_pred CCCCCCCCCccEEEeCCCCceeEEEEEEEEEEecccCCccccccccceEEEeEEeccCC-CCCCCccccceeeecCCCCC
Q 021429 150 TDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGN-LDSTNEEALDGIIGFGKSNS 228 (312)
Q Consensus 150 ~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~l~~~~~~~~~~~~~~~~~~~fg~~~~~~~~-~~~~~~~~~~GIlGLg~~~~ 228 (312)
..|.|.+.|++|+ +.|.+++|+|+|++.. + ++.|||++...+. |. ...++||||||++..
T Consensus 75 ------~~~~~~i~Yg~gs-~~G~~~~D~v~ig~~~--------v-~~~fg~~~~~~~~~~~---~~~~~GilGLg~~~~ 135 (341)
T 3k1w_A 75 ------NGTELTLRYSTGT-VSGFLSQDIITVGGIT--------V-TQMFGEVTEMPALPFM---LAEFDGVVGMGFIEQ 135 (341)
T ss_dssp ------EEEEEEEEETTEE-EEEEEEEEEEEETTEE--------E-EEEEEEEEECCHHHHT---TCSSSEEEECSCGGG
T ss_pred ------CCCEEEEEECCcE-EEEEEEEEEEEECCce--------e-eEEEEEEEEccccccc---cCCcceEEECCchhh
Confidence 4668999999998 5999999999998753 6 8999999987653 32 256799999999765
Q ss_pred ------cHHHHHHhcCCC-CCeeEEeecCCC-----CcceEEeCCCCC----CCceeecCCCCCCcEEEEEEEEEECCEE
Q 021429 229 ------SMISQLASSGGV-RKMFAHCLDGIN-----GGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDF 292 (312)
Q Consensus 229 ------s~~~~l~~~g~i-~~~Fs~~l~~~~-----~~G~l~fGg~d~----~~~~~~pl~~~~~~~~v~l~~i~vg~~~ 292 (312)
+++++|++||+| +++||+||.+.. ..|+|+||++|+ +++.|+|+. .+.+|.|.|++|+|+++.
T Consensus 136 s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~ 214 (341)
T 3k1w_A 136 AIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLI-KTGVWQIQMKGVSVGSST 214 (341)
T ss_dssp CGGGCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECS-STTSCEEEECCEEETTEE
T ss_pred cccCCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecC-CCCEEEEEEeEEEECCEE
Confidence 489999999999 899999998752 379999999995 578999996 567999999999999997
Q ss_pred ecc
Q 021429 293 LNL 295 (312)
Q Consensus 293 ~~~ 295 (312)
+..
T Consensus 215 ~~~ 217 (341)
T 3k1w_A 215 LLC 217 (341)
T ss_dssp EEC
T ss_pred eec
Confidence 544
No 19
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=4.1e-37 Score=284.66 Aligned_cols=192 Identities=21% Similarity=0.314 Sum_probs=160.6
Q ss_pred CceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCC--CCCCCCC--CCCCCccCcccCCCCCCccceecCCCccccCCCCC
Q 021429 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCI--QCKECPR--RSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (312)
Q Consensus 72 ~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~--~c~~C~~--~~~~~~~~~~f~~~~Sst~~~v~c~~~~C~~~~~~ 147 (312)
.+.+|+++|.||||+|++.|+|||||+++||++. .|..|.. ....|..++.|||++|+||+.
T Consensus 10 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~-------------- 75 (342)
T 2qzx_A 10 EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQN-------------- 75 (342)
T ss_dssp CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEE--------------
T ss_pred CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCccc--------------
Confidence 4689999999999999999999999999999976 6765432 123455678999999999997
Q ss_pred CCCCCCCCCCCccEEEeCCCCceeEEEEEEEEEEecccCCccccccccceEEEeEEeccCCCCCCCccccceeeecCCCC
Q 021429 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (312)
Q Consensus 148 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~l~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~ 227 (312)
..|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||++... ..+||||||+..
T Consensus 76 --------~~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~---------~~~GilGLg~~~ 130 (342)
T 2qzx_A 76 --------LNTRFDIKYGDGSYAKGKLYKDTVGIGGV--------SVRDQLFANVWSTS---------ARKGILGIGFQS 130 (342)
T ss_dssp --------EEEEEEEECTTSCEEEEEEEEEEEEETTE--------EEEEEEEEEEEEEC---------SSSCEEECSCGG
T ss_pred --------CCCcEEEEeCCCCeEEEEEEEEEEEECCE--------EecceEEEEEEecC---------CCcCEEEEcccc
Confidence 35689999999997799999999999874 37889999998763 368999999975
Q ss_pred C--------cHHHHHHhcCCC-CCeeEEeecCC-CCcceEEeCCCCC----CCceeecCCCCCCcEEEEEEEEEECCEEe
Q 021429 228 S--------SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFL 293 (312)
Q Consensus 228 ~--------s~~~~l~~~g~i-~~~Fs~~l~~~-~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~v~l~~i~vg~~~~ 293 (312)
. +|+++|++||+| +++||+||.+. ...|+|+||++|+ +++.|+|+.. ..+|.|.|++|+|+++.+
T Consensus 131 ~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~-~~~~~v~l~~i~v~g~~~ 209 (342)
T 2qzx_A 131 GEATEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPITS-EKKLTVGLRSVNVRGRNV 209 (342)
T ss_dssp GCSSSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCC-SSSCEEEEEEEEETTEEE
T ss_pred ccCCCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEeccC-CceEEEEEeEEEECCEec
Confidence 4 799999999999 79999999875 4679999999985 6799999974 458999999999999988
Q ss_pred ccC-CcccccC
Q 021429 294 NLP-TDVFGVG 303 (312)
Q Consensus 294 ~~~-~~~~~~~ 303 (312)
..+ ..++|+|
T Consensus 210 ~~~~~aiiDSG 220 (342)
T 2qzx_A 210 DANTNVLLDSG 220 (342)
T ss_dssp EEEEEEEECTT
T ss_pred CCCcCEEEeCC
Confidence 654 3444443
No 20
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=1e-36 Score=281.87 Aligned_cols=192 Identities=23% Similarity=0.358 Sum_probs=161.4
Q ss_pred CceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCC--CCCCCCC--CCCCccCcccCCCCCCccceecCCCccccCCCCC
Q 021429 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQ--CKECPRR--SSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (312)
Q Consensus 72 ~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~--c~~C~~~--~~~~~~~~~f~~~~Sst~~~v~c~~~~C~~~~~~ 147 (312)
.+++|+++|.||||+|++.|+|||||+++||++.. |..|... ...|..++.|||++|+||+.+
T Consensus 10 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~------------- 76 (342)
T 3pvk_A 10 EQVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDL------------- 76 (342)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEEE-------------
T ss_pred CCcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCCCcCCCccCcceeec-------------
Confidence 46899999999999999999999999999999765 7655321 234555789999999999984
Q ss_pred CCCCCCCCCCCccEEEeCCCCceeEEEEEEEEEEecccCCccccccccceEEEeEEeccCCCCCCCccccceeeecCCCC
Q 021429 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (312)
Q Consensus 148 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~l~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~ 227 (312)
.|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||++... ..+||||||++.
T Consensus 77 ---------~~~~~i~Yg~gs~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~---------~~~GilGLg~~~ 130 (342)
T 3pvk_A 77 ---------NTPFKIGYGDGSSSQGTLYKDTVGFGGV--------SIKNQVLADVDSTS---------IDQGILGVGYKT 130 (342)
T ss_dssp ---------EEEEEEECSSSCEEEEEEEEEEEEETTE--------EEEEEEEEEEEEES---------SSSCEEECSCGG
T ss_pred ---------CCeEEEEecCCCeEEEEEEEEEEEECCE--------EecceEEEEEEccC---------CCccEEEecCcc
Confidence 5689999999997799999999999875 37889999998753 358999999986
Q ss_pred -------CcHHHHHHhcCCC-CCeeEEeecCC-CCcceEEeCCCCC----CCceeecCCCCCCcEEEEEEEEEECCEEec
Q 021429 228 -------SSMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLN 294 (312)
Q Consensus 228 -------~s~~~~l~~~g~i-~~~Fs~~l~~~-~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~v~l~~i~vg~~~~~ 294 (312)
.+|+++|++||+| +++||+||.+. ...|+|+||++|+ +++.|+|+.. ..+|.|.|++|+|+++.+.
T Consensus 131 ~~~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~-~~~~~v~l~~i~v~g~~~~ 209 (342)
T 3pvk_A 131 NEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVTS-DRELRISLGSVEVSGKTIN 209 (342)
T ss_dssp GCSSCSSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCC-SSSCEEEEEEEEETTEEEE
T ss_pred ccccccCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecCc-cceEEEEEeEEEECCEEec
Confidence 4799999999999 89999999875 4579999999985 6799999974 4589999999999999987
Q ss_pred cC--CcccccC
Q 021429 295 LP--TDVFGVG 303 (312)
Q Consensus 295 ~~--~~~~~~~ 303 (312)
.+ ..++|+|
T Consensus 210 ~~~~~~iiDSG 220 (342)
T 3pvk_A 210 TDNVDVLLDSG 220 (342)
T ss_dssp EEEEEEEECTT
T ss_pred CCCceEEEeCC
Confidence 64 3444544
No 21
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=3e-37 Score=288.88 Aligned_cols=179 Identities=22% Similarity=0.396 Sum_probs=155.1
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC--CCCCCCCCCccCcccCCCCCCccceecCCCccccCCCCC
Q 021429 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (312)
Q Consensus 70 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~c~--~C~~~~~~~~~~~~f~~~~Sst~~~v~c~~~~C~~~~~~ 147 (312)
++.+.+|+++|.||||+|++.|+|||||+++||+|..|. .|.. ++.|||++|+||+.
T Consensus 58 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~-------~~~y~~~~SsT~~~-------------- 116 (375)
T 1miq_A 58 DVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSI-------KNLYDSSKSKSYEK-------------- 116 (375)
T ss_dssp GTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGGGG-------SCCBCGGGCTTCEE--------------
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCCcccccC-------CCcCCCccCCceEE--------------
Confidence 567899999999999999999999999999999999996 4654 47999999999997
Q ss_pred CCCCCCCCCCCccEEEeCCCCceeEEEEEEEEEEecccCCccccccccceEEEeEEe----ccCCCCCCCccccceeeec
Q 021429 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGAR----QSGNLDSTNEEALDGIIGF 223 (312)
Q Consensus 148 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~l~~~~~~~~~~~~~~~~~~~fg~~~~----~~~~~~~~~~~~~~GIlGL 223 (312)
..|.|.+.|++|+ +.|.+++|+|+|++.. +++ .|||++. .. .|.. ..++|||||
T Consensus 117 --------~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~--------v~~-~Fg~~~~~~~~~~-~f~~---~~~dGilGL 174 (375)
T 1miq_A 117 --------DGTKVDITYGSGT-VKGFFSKDLVTLGHLS--------MPY-KFIEVTDTDDLEP-IYSS---VEFDGILGL 174 (375)
T ss_dssp --------EEEEEEEEETTEE-EEEEEEEEEEEETTEE--------EEE-EEEEEEECGGGTT-HHHH---SCCCEEEEC
T ss_pred --------CCcEEEEEeCCCe-EEEEEEEEEEEEcCce--------ECc-EEEEEEecccccc-cccc---CCCceEEeC
Confidence 3568999999999 5999999999998753 677 9999998 43 3321 467999999
Q ss_pred CCCCC------cHHHHHHhcCCC-CCeeEEeecCC-CCcceEEeCCCCC----CCceeecCCCCCCcEEEEEEEEEECCE
Q 021429 224 GKSNS------SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLD 291 (312)
Q Consensus 224 g~~~~------s~~~~l~~~g~i-~~~Fs~~l~~~-~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~v~l~~i~vg~~ 291 (312)
|++.. +++++|++||+| +++||+||.+. ..+|+|+||++|+ +++.|+|+. .+.+|.|.|+ |+|+++
T Consensus 175 g~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~-i~v~g~ 252 (375)
T 1miq_A 175 GWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLN-HDLYWQIDLD-VHFGKQ 252 (375)
T ss_dssp SSCCTTCSSCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBS-SSSSSEEEEE-EEETTE
T ss_pred CCCcccccCCCCHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecC-CCceEEEEEE-EEECCE
Confidence 99864 589999999999 89999999885 3579999999995 678999996 5679999999 999998
Q ss_pred Ee
Q 021429 292 FL 293 (312)
Q Consensus 292 ~~ 293 (312)
.+
T Consensus 253 ~~ 254 (375)
T 1miq_A 253 TM 254 (375)
T ss_dssp EE
T ss_pred Ec
Confidence 87
No 22
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=2.3e-36 Score=279.23 Aligned_cols=178 Identities=21% Similarity=0.334 Sum_probs=153.6
Q ss_pred CceeEEEEEEeCCCCceEEEEEEcCCCeeeEe-----CCCCCCCCCCCCCCccCcccCCCCCCccceecCCCccccCCCC
Q 021429 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVN-----CIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYG 146 (312)
Q Consensus 72 ~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~-----~~~c~~C~~~~~~~~~~~~f~~~~Sst~~~v~c~~~~C~~~~~ 146 (312)
.+..|+++|.||||+|++.|+|||||+++||+ |..|..|.. ++.|||++|+||+.+
T Consensus 10 ~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~-------~~~y~~~~SsT~~~~------------ 70 (339)
T 3fv3_A 10 EGPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKS-------SGTFTPSSSSSYKNL------------ 70 (339)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTT-------TCCBCGGGCTTCEEE------------
T ss_pred CCCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCC-------CCcCCCccCcceeeC------------
Confidence 36799999999999999999999999999998 444445654 489999999999984
Q ss_pred CCCCCCCCCCCCccEEEeCCCCceeEEEEEEEEEEecccCCccccccccceEEEeEEeccCCCCCCCccccceeeecCCC
Q 021429 147 GPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKS 226 (312)
Q Consensus 147 ~~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~l~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~ 226 (312)
.|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||++...+ .+||||||++
T Consensus 71 ----------~~~~~i~Yg~gs~~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~~---------~~GilGLg~~ 123 (339)
T 3fv3_A 71 ----------GAAFTIRYGDGSTSQGTWGKDTVTINGVS--------ITGQQIADVTQTSV---------DQGILGIGYT 123 (339)
T ss_dssp ----------EEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEESS---------SSCEEECSCG
T ss_pred ----------CceEEEEECCCceEEEEEEEEEEEECCEE--------ECceEEEEEEecCC---------CceeEEecCc
Confidence 56899999999878999999999998753 78999999987643 4799999997
Q ss_pred CC----------------cHHHHHHhcCCC-CCeeEEeecCC-CCcceEEeCCCCC----CCceeecCCCCCCcEEEEEE
Q 021429 227 NS----------------SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMT 284 (312)
Q Consensus 227 ~~----------------s~~~~l~~~g~i-~~~Fs~~l~~~-~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~v~l~ 284 (312)
.. +|+++|++||+| +++||+||.+. ...|+|+||++|+ +++.|+|+.. ..+|.|.|+
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~-~~~~~v~l~ 202 (339)
T 3fv3_A 124 SNEAVYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVTS-SQALTISLA 202 (339)
T ss_dssp GGCCCBCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBCC-SSSCEEEEE
T ss_pred cccccccccccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEeccc-CccEEEEEE
Confidence 54 299999999999 89999999875 4589999999984 6799999964 568999999
Q ss_pred EEEECCEEeccC
Q 021429 285 AVQVGLDFLNLP 296 (312)
Q Consensus 285 ~i~vg~~~~~~~ 296 (312)
+|+|+++.+..+
T Consensus 203 ~i~v~g~~~~~~ 214 (339)
T 3fv3_A 203 SVNLKGSSFSFG 214 (339)
T ss_dssp EEEESSCEEEEE
T ss_pred EEEECCEeecCC
Confidence 999999987653
No 23
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=7.6e-37 Score=291.76 Aligned_cols=177 Identities=20% Similarity=0.343 Sum_probs=155.5
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC--CCCCCCCCCccCcccCCCCCCccceecCCCccccCCCCC
Q 021429 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (312)
Q Consensus 70 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~c~--~C~~~~~~~~~~~~f~~~~Sst~~~v~c~~~~C~~~~~~ 147 (312)
++.+.+|+++|.||||||++.|++||||+++||+|..|. .|..+ +.|||++|+||+.
T Consensus 133 n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C~~~-------~~ydps~SsT~~~-------------- 191 (451)
T 3qvc_A 133 DLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESCESK-------NHYDSSKSKTYEK-------------- 191 (451)
T ss_dssp GGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGGTTS-------CCBCGGGCTTCEE--------------
T ss_pred ecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCccccCCC-------CCCCCCCCccccc--------------
Confidence 567899999999999999999999999999999999994 57543 7999999999997
Q ss_pred CCCCCCCCCCCccEEEeCCCCceeEEEEEEEEEEecccCCccccccccceEEEeEEe----ccCCCCCCCccccceeeec
Q 021429 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGAR----QSGNLDSTNEEALDGIIGF 223 (312)
Q Consensus 148 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~l~~~~~~~~~~~~~~~~~~~fg~~~~----~~~~~~~~~~~~~~GIlGL 223 (312)
..|.|.+.|++|+ +.|.+++|+|+|++.. ++ +.|||++. ..+ |.. ...+|||||
T Consensus 192 --------~~~~f~i~YgdGs-~~G~~~~Dtv~igg~~--------v~-~~Fg~a~~t~~~~~~-f~~---~~~dGILGL 249 (451)
T 3qvc_A 192 --------DDTPVKLTSKAGT-ISGIFSKDLVTIGKLS--------VP-YKFIEMTEIVGFEPF-YSE---SDVDGVFGL 249 (451)
T ss_dssp --------EEEEEEEECSSEE-EEEEEEEEEEEETTEE--------EE-EEEEEEEEEEECTTH-HHH---SCCCEEEEC
T ss_pred --------CCCEEEEEECCCE-EEEEEEEEEEEECCEE--------EE-EEEEEEEeccccCCC-ccC---CCCCEEEec
Confidence 4568999999999 6999999999998753 67 99999998 555 432 467999999
Q ss_pred CCCCC------cHHHHHHhcCCC-CCeeEEeecCC-CCcceEEeCCCCC----CCceeecCCCCCCcEEEEEEEEEECCE
Q 021429 224 GKSNS------SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLD 291 (312)
Q Consensus 224 g~~~~------s~~~~l~~~g~i-~~~Fs~~l~~~-~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~v~l~~i~vg~~ 291 (312)
|++.. +++++|++||+| +++||+||.+. ..+|+|+|||+|+ +++.|+|+. .+.+|.|.|+ |+|+++
T Consensus 250 g~~~~s~~~~~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~-~~~~w~v~l~-I~Vgg~ 327 (451)
T 3qvc_A 250 GWKDLSIGSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLN-HDLMWQVDLD-VHFGNV 327 (451)
T ss_dssp SSBCSSSSCCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECS-STTSSEEEEE-EEETTE
T ss_pred CCCcccccCCCCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEcc-cCCeeEEEEE-EEECCc
Confidence 99753 699999999999 89999999986 3479999999995 679999997 5789999999 999998
No 24
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=4.7e-37 Score=293.02 Aligned_cols=179 Identities=21% Similarity=0.360 Sum_probs=153.9
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC--CCCCCCCCCccCcccCCCCCCccceecCCCccccCCCCC
Q 021429 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (312)
Q Consensus 70 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~c~--~C~~~~~~~~~~~~f~~~~Sst~~~v~c~~~~C~~~~~~ 147 (312)
++.+.+|+++|.||||+|++.|+|||||+++||+|..|. .|.. ++.|||++|+||+.
T Consensus 134 n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C~~-------~~~ydps~SsT~~~-------------- 192 (453)
T 2bju_A 134 DFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLT-------KHLYDSSKSRTYEK-------------- 192 (453)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTGGG-------SCCBCGGGCTTCEE--------------
T ss_pred ecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCCccccCC-------CCcCCCccCCceeE--------------
Confidence 557889999999999999999999999999999999996 5653 48999999999997
Q ss_pred CCCCCCCCCCCccEEEeCCCCceeEEEEEEEEEEecccCCccccccccceEEEeEEecc--CCCCCCCccccceeeecCC
Q 021429 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQS--GNLDSTNEEALDGIIGFGK 225 (312)
Q Consensus 148 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~l~~~~~~~~~~~~~~~~~~~fg~~~~~~--~~~~~~~~~~~~GIlGLg~ 225 (312)
..|.|.+.|++|+ +.|.+++|+|+|++.. ++ +.|||++... +.+. .....+||||||+
T Consensus 193 --------~~~~~~i~YgdGs-~~G~~~~Dtv~ig~~~--------v~-~~Fg~a~~~~~~g~~f--~~~~~dGIlGLg~ 252 (453)
T 2bju_A 193 --------DGTKVEMNYVSGT-VSGFFSKDLVTVGNLS--------LP-YKFIEVIDTNGFEPTY--TASTFDGILGLGW 252 (453)
T ss_dssp --------EEEEEEEECSSSE-EEEEEEEEEEEETTEE--------EE-EEEEEEEECGGGTTHH--HHSSCCEEEECSC
T ss_pred --------CCcEEEEEcCCCC-eEEEEEEEEEEEeCcE--------EE-EEEEEEEEecccCccc--cccCCceeEeccC
Confidence 3568999999999 5999999999998753 67 9999999876 4321 1246799999999
Q ss_pred CCC------cHHHHHHhcCCC-CCeeEEeecCC-CCcceEEeCCCCC----CCceeecCCCCCCcEEEEEEEEEECCE
Q 021429 226 SNS------SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLD 291 (312)
Q Consensus 226 ~~~------s~~~~l~~~g~i-~~~Fs~~l~~~-~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~v~l~~i~vg~~ 291 (312)
+.. +++++|++||+| +++||+||.+. ..+|+|+||++|+ +++.|+|+. .+.+|.|.|+ |+|+++
T Consensus 253 ~~~s~~~~~~~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~-~~~~w~V~l~-I~Vgg~ 328 (453)
T 2bju_A 253 KDLSIGSVDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLN-HDLYWQITLD-AHVGNI 328 (453)
T ss_dssp GGGSTTCCCCHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEE-EETTEEEEEE-EEETTE
T ss_pred CcccccCCCcHHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecC-CCceEEEEEE-EEECcE
Confidence 753 589999999999 89999999885 3579999999995 678999996 4679999999 999993
No 25
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=3.7e-36 Score=288.32 Aligned_cols=198 Identities=19% Similarity=0.236 Sum_probs=162.0
Q ss_pred CCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccCcccCCCCCCccceecCCCccccCCCCCCCC
Q 021429 71 DGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLT 150 (312)
Q Consensus 71 ~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~c~~C~~~~~~~~~~~~f~~~~Sst~~~v~c~~~~C~~~~~~~~~ 150 (312)
..+..|+++|.||||+|++.|+|||||+++||+|..| |.. ++.|||++|+||+.
T Consensus 71 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c--c~~-------~~~y~~~~SsT~~~----------------- 124 (455)
T 3lpj_A 71 KSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PFL-------HRYYQRQLSSTYRD----------------- 124 (455)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TTC-------SCCCCGGGCTTCEE-----------------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc--ccc-------CCcccCCCCCCccc-----------------
Confidence 3456899999999999999999999999999999887 543 37899999999998
Q ss_pred CCCCCCCCccEEEeCCCCceeEEEEEEEEEEecccCCccccccccceEEEeEEeccCCCCCCCccccceeeecCCCC---
Q 021429 151 DCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN--- 227 (312)
Q Consensus 151 ~C~~~~~~~~~~~Y~~g~~~~G~~~~D~l~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~--- 227 (312)
..|.|.+.|++|+. .|.+++|+|+|++.. . ....+.|+++.+..+.|.. ...++||||||++.
T Consensus 125 -----~~~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~~-~-----~~~~~~~~~~~~~~~~~~~--~~~~dGIlGLg~~~~s~ 190 (455)
T 3lpj_A 125 -----LRKGVYVPYTQGKW-EGELGTDLVSIPHGP-N-----VTVRANIAAITESDKFFIN--GSNWEGILGLAYAEIAR 190 (455)
T ss_dssp -----EEEEEEEECSSCEE-EEEEEEEEEECTTSC-S-----CEEEEEEEEEEEEESCSCT--TCCCCEEEECSCGGGCS
T ss_pred -----CCccEEEEeCCeEE-EEEEEEEEEEECCCc-c-----eeeEEEEEEEEccCccccc--CCCcceEEEeCcccccc
Confidence 35689999999997 999999999997421 0 1123678888877654431 24689999999864
Q ss_pred -----CcHHHHHHhcCCCCCeeEEeecCC-----------CCcceEEeCCCCC----CCceeecCCCCCCcEEEEEEEEE
Q 021429 228 -----SSMISQLASSGGVRKMFAHCLDGI-----------NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQ 287 (312)
Q Consensus 228 -----~s~~~~l~~~g~i~~~Fs~~l~~~-----------~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~v~l~~i~ 287 (312)
.+++++|++|++|+++||+||.+. ..+|+|+||++|+ +++.|+|+. .+.+|.|.|++|+
T Consensus 191 ~~~~~~~~~~~L~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~ 269 (455)
T 3lpj_A 191 PDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIR-REWYYEVIIVRVE 269 (455)
T ss_dssp SCTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECC-SBTTBBCCEEEEE
T ss_pred ccCCCCcHHHHHHHccCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecC-CCceeEEEEeEEE
Confidence 368999999999988999999752 3579999999995 678999996 4679999999999
Q ss_pred ECCEEeccCCcccccCCCCCeEEcC
Q 021429 288 VGLDFLNLPTDVFGVGDNKDNISAA 312 (312)
Q Consensus 288 vg~~~~~~~~~~~~~~~~~~~iiDS 312 (312)
|+++.+.++...|. ...+||||
T Consensus 270 v~g~~~~~~~~~~~---~~~aiiDS 291 (455)
T 3lpj_A 270 INGQDLKMDCKEYN---YDKSIVDS 291 (455)
T ss_dssp ETTEECCCCGGGGG---SSCEEECT
T ss_pred ECCEEccccccccC---CCeEEEEC
Confidence 99999988765553 45678886
No 26
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=6.7e-36 Score=280.51 Aligned_cols=198 Identities=23% Similarity=0.306 Sum_probs=160.9
Q ss_pred CCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccCcccCCCCCCccceecCCCccccCCCCCCCC
Q 021429 71 DGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLT 150 (312)
Q Consensus 71 ~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~c~~C~~~~~~~~~~~~f~~~~Sst~~~v~c~~~~C~~~~~~~~~ 150 (312)
..+..|+++|.||||+|++.|+|||||+++||+|..|..|. +.|||++|+||+..
T Consensus 10 ~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~~~---------~~f~~~~SsT~~~~---------------- 64 (383)
T 2ewy_A 10 DSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSYID---------TYFDTERSSTYRSK---------------- 64 (383)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBTTBS---------CCCCGGGCTTCEEE----------------
T ss_pred CCCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCCccc---------cCcccccCccceeC----------------
Confidence 34678999999999999999999999999999999887663 68999999999983
Q ss_pred CCCCCCCCccEEEeCCCCceeEEEEEEEEEEecccCCccccccccceEEEeEEeccCCCCCCCccccceeeecCCCCC--
Q 021429 151 DCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS-- 228 (312)
Q Consensus 151 ~C~~~~~~~~~~~Y~~g~~~~G~~~~D~l~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~-- 228 (312)
.|.|.+.|++|+. .|.+++|+|+|++... ....+.|++..+..+.|.. ...++||||||++..
T Consensus 65 ------~~~~~i~Yg~Gs~-~G~~~~Dtv~i~~~~~------~~~~~~~~~~~~~~~~~~~--~~~~dGilGLg~~~~s~ 129 (383)
T 2ewy_A 65 ------GFDVTVKYTQGSW-TGFVGEDLVTIPKGFN------TSFLVNIATIFESENFFLP--GIKWNGILGLAYATLAK 129 (383)
T ss_dssp ------EEEEEEECSSCEE-EEEEEEEEEEETTTEE------EEEEEEEEEEEEEESCSCT--TCCCCEEEECSCGGGCS
T ss_pred ------CceEEEEECCcEE-EEEEEEEEEEECCCcc------ceeEEEEEEEEeecceeec--cCcCceEEecCchhccc
Confidence 5689999999986 8999999999975210 0124678887765554421 246799999998753
Q ss_pred ------cHHHHHHhcCCCCCeeEEeecC--------CCCcceEEeCCCCC----CCceeecCCCCCCcEEEEEEEEEECC
Q 021429 229 ------SMISQLASSGGVRKMFAHCLDG--------INGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGL 290 (312)
Q Consensus 229 ------s~~~~l~~~g~i~~~Fs~~l~~--------~~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~v~l~~i~vg~ 290 (312)
+++++|++|+.++++||+||.+ ....|+|+||++|+ +++.|+|+. ...+|+|.|++|+|++
T Consensus 130 ~~~~~~~~~~~l~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~g 208 (383)
T 2ewy_A 130 PSSSLETFFDSLVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIK-EEWYYQIEILKLEIGG 208 (383)
T ss_dssp SCTTSCCHHHHHHHHHTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECS-SBTTBBCCEEEEEETT
T ss_pred ccccccCHHHHHHHccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecC-CCceEEEEEEEEEECC
Confidence 5899999999888899999964 14579999999984 689999997 4579999999999999
Q ss_pred EEeccCCcccccCCCCCeEEcC
Q 021429 291 DFLNLPTDVFGVGDNKDNISAA 312 (312)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~iiDS 312 (312)
+.+.++...|. ...+||||
T Consensus 209 ~~~~~~~~~~~---~~~aiiDS 227 (383)
T 2ewy_A 209 QSLNLDCREYN---ADKAIVDS 227 (383)
T ss_dssp EECCCCTTTTT---SSCEEECT
T ss_pred EEccccccccC---CccEEEEc
Confidence 99988766554 45688886
No 27
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=1.4e-35 Score=279.49 Aligned_cols=196 Identities=19% Similarity=0.240 Sum_probs=160.8
Q ss_pred CceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccCcccCCCCCCccceecCCCccccCCCCCCCCC
Q 021429 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (312)
Q Consensus 72 ~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~c~~C~~~~~~~~~~~~f~~~~Sst~~~v~c~~~~C~~~~~~~~~~ 151 (312)
.+..|+++|.||||+|++.|+|||||+++||+|..|..|. +.|||++|+||+..
T Consensus 19 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~~~---------~~y~~~~SsT~~~~----------------- 72 (395)
T 2qp8_A 19 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLH---------RYYQRQLSSTYRDL----------------- 72 (395)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTCS---------CCCCGGGCTTCEEE-----------------
T ss_pred CCceEEEEEEecCCCceEEEEEecCCCceEEECCCCcccc---------CCcCcccCCCceeC-----------------
Confidence 4678999999999999999999999999999999886553 68999999999983
Q ss_pred CCCCCCCccEEEeCCCCceeEEEEEEEEEEec-ccCCccccccccceEEEeEEeccCCCCCCCccccceeeecCCCCC--
Q 021429 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDK-VSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS-- 228 (312)
Q Consensus 152 C~~~~~~~~~~~Y~~g~~~~G~~~~D~l~~~~-~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~-- 228 (312)
.|.|.+.|++|+. .|.+++|+|+|++ ... ...+.|++..+..+.|.. ...++||||||++..
T Consensus 73 -----~~~~~i~Yg~Gs~-~G~~~~Dtv~ig~g~~~-------~~~~~~~~~~~~~~~f~~--~~~~dGIlGLg~~~~s~ 137 (395)
T 2qp8_A 73 -----RKGVYVPYTQGKW-EGELGTDLVSIPHGPNV-------TVRANIAAITESDKFFIN--GSNWEGILGLAYAEIAR 137 (395)
T ss_dssp -----EEEEEEECSSCEE-EEEEEEEEEECTTSCSC-------EEEEEEEEEEEEESCSCT--TCCCCEEEECSCGGGCS
T ss_pred -----CceEEEEECCcEE-EEEEEeEEEEECCCCCc-------eEEEEEEEEEccCccccc--ccCccceEEcCchhhcc
Confidence 5689999999987 8999999999973 221 123668877765554421 246799999998653
Q ss_pred ------cHHHHHHhcCCCCCeeEEeecCC-----------CCcceEEeCCCCC----CCceeecCCCCCCcEEEEEEEEE
Q 021429 229 ------SMISQLASSGGVRKMFAHCLDGI-----------NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQ 287 (312)
Q Consensus 229 ------s~~~~l~~~g~i~~~Fs~~l~~~-----------~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~v~l~~i~ 287 (312)
+++++|++|++|+++||+||.+. ..+|+|+||++|+ +++.|+|+. .+.+|.|.|++|+
T Consensus 138 ~~~~~~~~~~~l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~ 216 (395)
T 2qp8_A 138 PDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIR-REWYYEVIIVRVE 216 (395)
T ss_dssp SCTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECC-SBTTBBCCEEEEE
T ss_pred CCCCCCCHHHHHHHccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccC-CCceEEEEEEEEE
Confidence 58999999999988999999752 3579999999985 578999996 4679999999999
Q ss_pred ECCEEeccCCcccccCCCCCeEEcC
Q 021429 288 VGLDFLNLPTDVFGVGDNKDNISAA 312 (312)
Q Consensus 288 vg~~~~~~~~~~~~~~~~~~~iiDS 312 (312)
|+++.+.++...|. ...+||||
T Consensus 217 v~g~~~~~~~~~~~---~~~aiiDS 238 (395)
T 2qp8_A 217 INGQDLKMDCKEYN---YDKSIVDS 238 (395)
T ss_dssp ETTEECCCCGGGGG---SSCEEECT
T ss_pred ECCEEcccCccccC---CceEEEEc
Confidence 99999988766664 45688886
No 28
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=6.2e-36 Score=275.46 Aligned_cols=182 Identities=15% Similarity=0.199 Sum_probs=155.3
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC--CCCCCCCCCccCcccCCCCCCccceecCCCccccCCCCC
Q 021429 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (312)
Q Consensus 70 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~c~--~C~~~~~~~~~~~~f~~~~Sst~~~v~c~~~~C~~~~~~ 147 (312)
++.+..|+++|.|| +|++.|+|||||+++||+|..|. .|.. ..++.|||++| ||+.
T Consensus 13 n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~-----~~~~~y~~~~S-T~~~-------------- 70 (330)
T 1yg9_A 13 VFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECVGGACVC-----PNLQKYEKLKP-KYIS-------------- 70 (330)
T ss_dssp EEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCCSGGGGS-----TTCCCCCCSSC-EEEE--------------
T ss_pred cCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCCccCcc-----cccCccCCCCC-ceEE--------------
Confidence 56788999999999 99999999999999999999997 5721 12479999999 9987
Q ss_pred CCCCCCCCCCCccEEEeCCCCceeEEEEEEEEEEecccCCccccccccceEEEeEEeccCCCCCCCccccceeeecCCCC
Q 021429 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (312)
Q Consensus 148 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~l~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~ 227 (312)
..+.|.+.|++|+. .|.+++|+|+|++. .++++.|||++.....|.. ..++||||||++.
T Consensus 71 --------~~~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~--------~~~~~~fg~~~~~~~~f~~---~~~~GilGLg~~~ 130 (330)
T 1yg9_A 71 --------DGNVQVKFFDTGSA-VGRGIEDSLTISQL--------TTSQQDIVLADELSQEVCI---LSADVVVGIAAPG 130 (330)
T ss_dssp --------EEEEEEEETTTEEE-EEEEEEEEEEETTE--------EEEEEEEEEEEEECTHHHH---TTCSEEEECSCTT
T ss_pred --------CCCEEEEEECCceE-EEEEEEEEEEECCE--------EEcCeEEEEEEEccccccc---ccCceEEEcCcch
Confidence 35689999999987 99999999999875 3788999999987333322 4679999999987
Q ss_pred Cc-------HHHHHHhcCCCCCeeEEeecCC-CC--cceEEeCCCCC----CCceeecCCCCCCcEEEEEEEEEECCEEe
Q 021429 228 SS-------MISQLASSGGVRKMFAHCLDGI-NG--GGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFL 293 (312)
Q Consensus 228 ~s-------~~~~l~~~g~i~~~Fs~~l~~~-~~--~G~l~fGg~d~----~~~~~~pl~~~~~~~~v~l~~i~vg~~~~ 293 (312)
.+ ++++|++||+|+++||+||.+. .. +|+|+||++|+ +++.|+|+. .+.+|.|.|++|+|+++.+
T Consensus 131 ~s~~~~~~~~~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~~ 209 (330)
T 1yg9_A 131 CPNALKGKTVLENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLV-GDDSWKFRLDGVKIGDTTV 209 (330)
T ss_dssp SCCTTSCCCHHHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBS-CTTSCCEECSEEEETTEEE
T ss_pred hccccCCCCHHHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECC-CCCEEEEEeCeEEECCEEE
Confidence 65 9999999998888999999875 22 79999999995 578999997 5679999999999999886
Q ss_pred c
Q 021429 294 N 294 (312)
Q Consensus 294 ~ 294 (312)
.
T Consensus 210 ~ 210 (330)
T 1yg9_A 210 A 210 (330)
T ss_dssp E
T ss_pred c
Confidence 4
No 29
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=2.4e-35 Score=278.48 Aligned_cols=197 Identities=19% Similarity=0.233 Sum_probs=158.5
Q ss_pred CceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccCcccCCCCCCccceecCCCccccCCCCCCCCC
Q 021429 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (312)
Q Consensus 72 ~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~c~~C~~~~~~~~~~~~f~~~~Sst~~~v~c~~~~C~~~~~~~~~~ 151 (312)
....|+++|.||||+|++.|+|||||+++||+|.+| |.. ++.|||++|+||+.
T Consensus 26 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c--~~~-------~~~y~~~~SsT~~~------------------ 78 (402)
T 3vf3_A 26 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PFL-------HRYYQRQLSSTYRD------------------ 78 (402)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TTC-------SCCCCGGGCTTCEE------------------
T ss_pred CCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC--Ccc-------cCCcCcccCccccc------------------
Confidence 356899999999999999999999999999999987 433 37899999999998
Q ss_pred CCCCCCCccEEEeCCCCceeEEEEEEEEEEecccCCccccccccceEEEeEEeccCCCCCCCccccceeeecCCCC----
Q 021429 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN---- 227 (312)
Q Consensus 152 C~~~~~~~~~~~Y~~g~~~~G~~~~D~l~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~---- 227 (312)
..|.|.+.|++|+. .|.+++|+|+|++... ....+.|++.....+.+.. ...++||||||++.
T Consensus 79 ----~~~~~~i~Yg~Gs~-~G~~~~D~v~ig~~~~------~~~~~~~~~~~~~~~~~~~--~~~~dGIlGLg~~~~s~~ 145 (402)
T 3vf3_A 79 ----LRKGVYVPYTQGKW-EGELGTDLVSIPHGPN------VTVRANIAAITESDKFFIN--GSNWEGILGLAYAEIARP 145 (402)
T ss_dssp ----EEEEEEEECSSCEE-EEEEEEEEEECTTSCS------CEEEEEEEEEEEEESCSCT--TCCCCEEEECSCGGGCSS
T ss_pred ----CCCEEEEEECcEEE-EEEEEEEEEEECCccc------cceeeeEEEEEcccccccc--CCCccceEEcCchhhccc
Confidence 35689999999996 9999999999984210 0123457887776554421 24679999999874
Q ss_pred ----CcHHHHHHhcCCCCCeeEEeecCC-----------CCcceEEeCCCCC----CCceeecCCCCCCcEEEEEEEEEE
Q 021429 228 ----SSMISQLASSGGVRKMFAHCLDGI-----------NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQV 288 (312)
Q Consensus 228 ----~s~~~~l~~~g~i~~~Fs~~l~~~-----------~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~v~l~~i~v 288 (312)
.+++++|++|++|+++||+||.+. ...|+|+||++|+ +++.|+|+. .+.+|.|.|++|+|
T Consensus 146 ~~~~~~~~~~L~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v 224 (402)
T 3vf3_A 146 DDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIR-REWYYEVIIVRVEI 224 (402)
T ss_dssp CTTSCCHHHHHHHHSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECS-SBTTBEECEEEEEE
T ss_pred CCcCCcHHHHHHHccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCC-cCcEEEEEEeEEEE
Confidence 369999999999988999999642 3479999999995 578999996 46799999999999
Q ss_pred CCEEeccCCcccccCCCCCeEEcC
Q 021429 289 GLDFLNLPTDVFGVGDNKDNISAA 312 (312)
Q Consensus 289 g~~~~~~~~~~~~~~~~~~~iiDS 312 (312)
+++.+.++...|. ...+||||
T Consensus 225 ~g~~~~~~~~~~~---~~~aiiDS 245 (402)
T 3vf3_A 225 NGQDLKMDCKEYN---YDKSIVDS 245 (402)
T ss_dssp TTEECCCCGGGGG---SSCEEECT
T ss_pred CCEEecccccccC---CCeEEEEC
Confidence 9999988765553 45677776
No 30
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=2.2e-35 Score=276.86 Aligned_cols=205 Identities=20% Similarity=0.337 Sum_probs=161.8
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccCcccCCCCCCccceecCCCccccCCCCCCC
Q 021429 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPL 149 (312)
Q Consensus 70 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~c~~C~~~~~~~~~~~~f~~~~Sst~~~v~c~~~~C~~~~~~~~ 149 (312)
++.+.+|+++|.|||| |+|||||+++||+|..|. +|+.++|.++.|....+...
T Consensus 10 ~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~---------------------~~~~~~C~s~~C~~~~~~~~ 63 (381)
T 1t6e_X 10 DPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQ---------------------PPAEIPCSSPTCLLANAYPA 63 (381)
T ss_dssp CTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTC---------------------CCCCCBTTSHHHHHHHSSCC
T ss_pred cCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCC---------------------CCCccCCCCchhccccCCCC
Confidence 5678999999999998 999999999999986641 24566777777766544333
Q ss_pred CCCCC--------CCCC-ccEEEeCCCCceeEEEEEEEEEEecccCCccccccccc----eEEEeEEeccC-CCCCCCcc
Q 021429 150 TDCTA--------NTSC-PYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGS----LIFGCGARQSG-NLDSTNEE 215 (312)
Q Consensus 150 ~~C~~--------~~~~-~~~~~Y~~g~~~~G~~~~D~l~~~~~~~~~~~~~~~~~----~~fg~~~~~~~-~~~~~~~~ 215 (312)
..|+. +..| .|.+.|++|+.+.|.+++|+|+|++..+.. .+++ +.|||+..... .+ ..
T Consensus 64 ~sc~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~----~v~~~~~~~~Fg~~~~~~~~~~----~~ 135 (381)
T 1t6e_X 64 PGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSK----PVSKVNVGVLAACAPSKLLASL----PR 135 (381)
T ss_dssp TTCCCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSS----EEEEEEEEEEEEECCGGGGTTS----CT
T ss_pred CCCCCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCc----cccceeeeeEeecCcccccCCC----CC
Confidence 45642 2456 599999999987999999999998753221 1233 46899987621 12 24
Q ss_pred ccceeeecCCCCCcHHHHHHhcCCCCCeeEEeecCCCCcceEEeCCCCC------CCceeecCCCC--CCcEEEEEEEEE
Q 021429 216 ALDGIIGFGKSNSSMISQLASSGGVRKMFAHCLDGINGGGIFAIGHVVQ------PEVNKTPLVPN--QPHYSINMTAVQ 287 (312)
Q Consensus 216 ~~~GIlGLg~~~~s~~~~l~~~g~i~~~Fs~~l~~~~~~G~l~fGg~d~------~~~~~~pl~~~--~~~~~v~l~~i~ 287 (312)
.+|||||||++.++++.||+++++++++||+||.+. .+|+|+||+++. ++++|+|++.+ ..+|+|.|++|+
T Consensus 136 ~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~-~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~ 214 (381)
T 1t6e_X 136 GSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTG-GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIV 214 (381)
T ss_dssp TEEEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSS-SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEE
T ss_pred CCceEEEeCCCcchhHHHHhhhcccCceEEEEeCCC-CCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEE
Confidence 689999999999999999999986699999999874 689999999873 57999999864 246789999999
Q ss_pred ECCEEeccCCcccccCCCCCeEEcC
Q 021429 288 VGLDFLNLPTDVFGVGDNKDNISAA 312 (312)
Q Consensus 288 vg~~~~~~~~~~~~~~~~~~~iiDS 312 (312)
||++.+.+++..|. ++++||||
T Consensus 215 vg~~~~~~~~~~~~---~~~~iiDT 236 (381)
T 1t6e_X 215 VGDTRVPVPEGALA---TGGVMLST 236 (381)
T ss_dssp ETTEECCCCTTCSC---TTCEEECS
T ss_pred EcCEEecCCHHHcc---CCCEEEEC
Confidence 99999998877775 57789997
No 31
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=2.5e-35 Score=270.83 Aligned_cols=180 Identities=21% Similarity=0.330 Sum_probs=152.6
Q ss_pred CceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccCcccCCCCCCccceecCCCccccCCCCCCCCC
Q 021429 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (312)
Q Consensus 72 ~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~c~~C~~~~~~~~~~~~f~~~~Sst~~~v~c~~~~C~~~~~~~~~~ 151 (312)
.+.+|+++|.|| +|++.|+|||||+++||+|..|..|..+ .++.|||++|+ ++.
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~-----~~~~y~~~~Ss-~~~------------------ 65 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELPSSEQT-----GHDLYTPSSSA-TKL------------------ 65 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSCHHHHT-----TSCCCBCCSSC-EEC------------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCCccccC-----CCCCCCchhcC-Ccc------------------
Confidence 578999999999 9999999999999999999999876422 34799999998 553
Q ss_pred CCCCCCCccEEEeCCCCceeEEEEEEEEEEecccCCccccccccceEEEeEEeccCCCCCCCccccceeeecCCCCC---
Q 021429 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS--- 228 (312)
Q Consensus 152 C~~~~~~~~~~~Y~~g~~~~G~~~~D~l~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~--- 228 (312)
..|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||++...+.+.. ....+||||||++..
T Consensus 66 ----~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~~--~~~~~GilGLg~~~~s~~ 131 (325)
T 1ibq_A 66 ----SGYSWDISYGDGSSASGDVYRDTVTVGGV--------TTNKQAVEAASKISSEFVQ--DTANDGLLGLAFSSINTV 131 (325)
T ss_dssp ----TTCBEEEECSSSCEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHT--STTCCEEEECSCGGGCCC
T ss_pred ----CCCEEEEEeCCCCEEEEEEEEeEEEECCE--------EEcceEEEEEEecCccccc--cCCCceEEEeCccccccc
Confidence 46899999999997799999999999875 3788999999987654321 136799999999753
Q ss_pred ------cHHHHHHhcCCC-CCeeEEeecCCCCcceEEeCCCCC----CCceeecCCCCCCcEEEEEEEEEECCEEec
Q 021429 229 ------SMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLN 294 (312)
Q Consensus 229 ------s~~~~l~~~g~i-~~~Fs~~l~~~~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~v~l~~i~vg~~~~~ 294 (312)
+++++|+++ + +++||+||.+ +..|+|+||++|+ +++.|+|+...+.+|.|.|++|+|+++.+.
T Consensus 132 ~p~~~~~~~~~l~~~--i~~~~FS~~l~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~~ 205 (325)
T 1ibq_A 132 QPKAQTTFFDTVKSQ--LDSPLFAVQLKH-DAPGVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSSS 205 (325)
T ss_dssp BSSCCCCHHHHHGGG--SSSSEEEEEEET-TEEEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCCB
T ss_pred CcCCCCCHHHHHHHh--cCCcEEEEEecC-CCCceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeecc
Confidence 488999987 6 8999999987 4689999999984 689999997667899999999999998664
No 32
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=8.4e-35 Score=267.15 Aligned_cols=178 Identities=23% Similarity=0.347 Sum_probs=150.1
Q ss_pred CceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccCcccCCCCCCccceecCCCccccCCCCCCCCC
Q 021429 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (312)
Q Consensus 72 ~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~c~~C~~~~~~~~~~~~f~~~~Sst~~~v~c~~~~C~~~~~~~~~~ 151 (312)
.+.+|+++|.|| +|++.|+|||||+++||+|..|..|..+ .++.|||++|+ ++.
T Consensus 13 ~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~~~~c~-----~~~~y~~~~Ss-~~~------------------ 66 (323)
T 1izd_A 13 NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTPSSERS-----GHDYYTPGSSA-QKI------------------ 66 (323)
T ss_dssp GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHT-----TCCCBCCCTTC-EEE------------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCCccccc-----CCCCCCccccC-Ccc------------------
Confidence 578999999999 8999999999999999999999866322 34799999998 553
Q ss_pred CCCCCCCccEEEeCCCCceeEEEEEEEEEEecccCCccccccccceEEEeEEeccCCCCCCCccccceeeecCCCCC---
Q 021429 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS--- 228 (312)
Q Consensus 152 C~~~~~~~~~~~Y~~g~~~~G~~~~D~l~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~--- 228 (312)
+.|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||++...+.+.. ....+||||||++..
T Consensus 67 ----~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~~--~~~~~GilGLg~~~~s~~ 132 (323)
T 1izd_A 67 ----DGATWSISYGDGSSASGDVYKDKVTVGGV--------SYDSQAVESAEKVSSEFTQ--DTANDGLLGLAFSSINTV 132 (323)
T ss_dssp ----EEEEEEEECTTSCEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHH--CTTCCEEEECSCGGGCCC
T ss_pred ----CCCeEEEEcCCCCeEEEEEEEEEEEECCE--------EECceEEEEEEeccccccc--cCCCceEEecCccccccc
Confidence 46789999999997799999999999875 3788999999987653321 135799999999743
Q ss_pred ------cHHHHHHhcCCC-CCeeEEeecCCCCcceEEeCCCCC----CCceeecCCCCCCcEEEEEEEEEECCEEe
Q 021429 229 ------SMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFL 293 (312)
Q Consensus 229 ------s~~~~l~~~g~i-~~~Fs~~l~~~~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~v~l~~i~vg~~~~ 293 (312)
+++++|++| + +++||+||.+ +..|+|+||++|+ +++.|+|+...+.+|.|.|++|+|++ .+
T Consensus 133 ~p~~~~~~~~~l~~~--i~~~~FS~~L~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~ 204 (323)
T 1izd_A 133 QPTPQKTFFDNVKSS--LSEPIFAVALKH-NAPGVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGS-DS 204 (323)
T ss_dssp BSSCCCCHHHHHGGG--SSSSEEEEECCT-TSCEEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETT-EE
T ss_pred CCCCCCCHHHHHHHh--ccCcEEEEEccC-CCCCEEEECCcCccccccceEEEECCCCCceEEEEECeEEECC-cc
Confidence 488999987 6 8999999987 4689999999996 56899999766789999999999999 54
No 33
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=1.2e-34 Score=265.99 Aligned_cols=176 Identities=21% Similarity=0.363 Sum_probs=149.8
Q ss_pred CceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccCcccCCCCCCccceecCCCccccCCCCCCCCC
Q 021429 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (312)
Q Consensus 72 ~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~c~~C~~~~~~~~~~~~f~~~~Sst~~~v~c~~~~C~~~~~~~~~~ 151 (312)
.+.+|+++|.|| +|++.|+|||||+++||+|..|..|..+ .++.|||++|+ ++.
T Consensus 13 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~-----~~~~y~~~~Ss-~~~------------------ 66 (323)
T 1bxo_A 13 NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQQS-----GHSVYNPSATG-KEL------------------ 66 (323)
T ss_dssp GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHT-----TSCCBCHHHHC-EEE------------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCchhcc-----CCCCCCcccCC-ccc------------------
Confidence 578999999999 9999999999999999999999876422 34899999998 654
Q ss_pred CCCCCCCccEEEeCCCCceeEEEEEEEEEEecccCCccccccccceEEEeEEeccCCCCCCCccccceeeecCCCCC---
Q 021429 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS--- 228 (312)
Q Consensus 152 C~~~~~~~~~~~Y~~g~~~~G~~~~D~l~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~--- 228 (312)
..|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||++..++.+.. ....+||||||++..
T Consensus 67 ----~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~~~~~~--~~~~~GilGLg~~~~s~~ 132 (323)
T 1bxo_A 67 ----SGYTWSISYGDGSSASGNVFTDSVTVGGVT--------AHGQAVQAAQQISAQFQQ--DTNNDGLLGLAFSSINTV 132 (323)
T ss_dssp ----EEEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHHT--CTTCSEEEECSCGGGCCC
T ss_pred ----CCCeEEEEeCCCCeEEEEEEEEEEEECCEE--------ECcEEEEEEEecCccccc--CCCCceEEEeCccccccc
Confidence 467999999999977999999999998753 788999999987554321 136799999998643
Q ss_pred ------cHHHHHHhcCCC-CCeeEEeecCCCCcceEEeCCCCC----CCceeecCCCCCCcEEEEEEEEEECC
Q 021429 229 ------SMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGL 290 (312)
Q Consensus 229 ------s~~~~l~~~g~i-~~~Fs~~l~~~~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~v~l~~i~vg~ 290 (312)
+++++|+++ | +++||+||.+ +..|+|+||++|+ +++.|+|+...+.+|.|.|++|+|++
T Consensus 133 ~~~~~~~~~~~l~~~--i~~~~FS~~L~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~ 202 (323)
T 1bxo_A 133 QPQSQTTFFDTVKSS--LAQPLFAVALKH-QQPGVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGS 202 (323)
T ss_dssp BSSCCCCHHHHHGGG--BSSSEEEEECCS-SSCEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETT
T ss_pred ccCCCCCHHHHHHHh--cCCcEEEEEEeC-CCCceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECC
Confidence 589999987 6 8999999987 4689999999984 78999999766789999999999999
No 34
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=1.5e-33 Score=260.50 Aligned_cols=167 Identities=25% Similarity=0.442 Sum_probs=143.0
Q ss_pred ceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccCcccCCCCCCccceecCCCccccCCCCCCCCCC
Q 021429 73 VGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTDC 152 (312)
Q Consensus 73 ~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~c~~C~~~~~~~~~~~~f~~~~Sst~~~v~c~~~~C~~~~~~~~~~C 152 (312)
+..|+++|.||||+|++.|+|||||+++||+|. +.|+|++|+++.
T Consensus 11 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~---------------~~y~~s~Ss~~~-------------------- 55 (340)
T 1wkr_A 11 LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD---------------KSYVKTSTSSAT-------------------- 55 (340)
T ss_dssp SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS---------------SCCCCCTTCEEE--------------------
T ss_pred CcEEEEEEEECCCCcEEEEEEeCCChhheecCC---------------CccCCcCCcccc--------------------
Confidence 569999999999999999999999999999863 479998887533
Q ss_pred CCCCCCccEEEeCCCCceeEEEEEEEEEEecccCCccccccccceEEEeEEeccCCCCCCCccccceeeecCCCCC----
Q 021429 153 TANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS---- 228 (312)
Q Consensus 153 ~~~~~~~~~~~Y~~g~~~~G~~~~D~l~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~---- 228 (312)
.|.|.+.|++|+ +.|.+++|+|+|++. .++++.|||++...+ | ..++||||||+...
T Consensus 56 ----~~~~~i~Yg~Gs-~~G~~~~Dtv~~g~~--------~v~~~~fg~~~~~~~-~-----~~~~GilGLg~~~~s~~~ 116 (340)
T 1wkr_A 56 ----SDKVSVTYGSGS-FSGTEYTDTVTLGSL--------TIPKQSIGVASRDSG-F-----DGVDGILGVGPVDLTVGT 116 (340)
T ss_dssp ----EEEEEEECSSCE-EEEEEEEEEEEETTE--------EEEEEEEEEEEEEES-C-----TTCSEEEECSCGGGGTTS
T ss_pred ----CceEEEEECCcE-EEEEEEEEEEEECCE--------EEcceEEEEEEccCC-C-----cCCCcEEECCcccccccc
Confidence 468999999998 589999999999874 378899999998765 4 24799999998653
Q ss_pred ----------cHHHHHHhcCCC-CCeeEEeecCC----CCcceEEeCCCCC----CCceeecCCCC---CCcEEEEEEEE
Q 021429 229 ----------SMISQLASSGGV-RKMFAHCLDGI----NGGGIFAIGHVVQ----PEVNKTPLVPN---QPHYSINMTAV 286 (312)
Q Consensus 229 ----------s~~~~l~~~g~i-~~~Fs~~l~~~----~~~G~l~fGg~d~----~~~~~~pl~~~---~~~~~v~l~~i 286 (312)
+++++|++||+| +++||+||.+. ...|+|+||++|+ +++.|+|+... ..+|.|. ++|
T Consensus 117 ~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i 195 (340)
T 1wkr_A 117 LSPHTSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSI 195 (340)
T ss_dssp EESCTTCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEE
T ss_pred ccccccccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeE
Confidence 579999999999 79999999863 3479999999984 68999999764 5689999 999
Q ss_pred EECC-EEec
Q 021429 287 QVGL-DFLN 294 (312)
Q Consensus 287 ~vg~-~~~~ 294 (312)
+|++ +.+.
T Consensus 196 ~v~~~~~l~ 204 (340)
T 1wkr_A 196 RYGSSTSIL 204 (340)
T ss_dssp EETTTEEEE
T ss_pred EECCCeEcc
Confidence 9998 8774
No 35
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.89 E-value=7.2e-24 Score=159.95 Aligned_cols=84 Identities=39% Similarity=0.601 Sum_probs=75.6
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC----CCCCCCCCCccCcccCCCCCCccceecCCCccccCCC
Q 021429 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK----ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVY 145 (312)
Q Consensus 70 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~c~----~C~~~~~~~~~~~~f~~~~Sst~~~v~c~~~~C~~~~ 145 (312)
++.+.+|+++|.||||+|+|.|+|||||+++||+|..|. .|.. ++.|||++|+||+.
T Consensus 9 n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~-------~~~y~p~~SsT~~~------------ 69 (97)
T 1lya_A 9 NYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWI-------HHKYNSDKSSTYVK------------ 69 (97)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHT-------SCCBCGGGCTTCEE------------
T ss_pred ECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCC-------CCCCCchhCCCcee------------
Confidence 567899999999999999999999999999999999986 4654 47999999999997
Q ss_pred CCCCCCCCCCCCCccEEEeCCCCceeEEEEEEEEEEec
Q 021429 146 GGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDK 183 (312)
Q Consensus 146 ~~~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~l~~~~ 183 (312)
..|.|.+.|++|+ +.|.+++|+|.|++
T Consensus 70 ----------~~~~~~i~Yg~Gs-~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 70 ----------NGTSFDIHYGSGS-LSGYLSQDTVSVPC 96 (97)
T ss_dssp ----------EEEEEEEECSSCE-EEEEEEEEEEEESC
T ss_pred ----------CCCcEEEEECCcE-EEEEEEEEEEEECC
Confidence 3568999999999 59999999999975
No 36
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=99.65 E-value=4.2e-16 Score=136.60 Aligned_cols=98 Identities=17% Similarity=0.306 Sum_probs=81.8
Q ss_pred cccceEEEeEEeccCCCCCCCccccceeeecCCCCC------cHHHHHHhcCCC-CCeeEEeecCCC-C--cceEEeCCC
Q 021429 193 TNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS------SMISQLASSGGV-RKMFAHCLDGIN-G--GGIFAIGHV 262 (312)
Q Consensus 193 ~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~------s~~~~l~~~g~i-~~~Fs~~l~~~~-~--~G~l~fGg~ 262 (312)
.++++.|||++...+.+.. ...++||||||++.. +++++|++||+| +++||+||.+.. . +|+|+||++
T Consensus 4 ~v~~~~Fg~~~~~~~~~f~--~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~ 81 (241)
T 1lya_B 4 KVERQVFGEATKQPGITFI--AAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGT 81 (241)
T ss_dssp EEEEEEEEEEEECCSSTTT--SCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSC
T ss_pred EECCeEEEEEEEccCCccc--cccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCc
Confidence 3678999999988663221 257899999999754 589999999999 899999998852 2 799999999
Q ss_pred CC----CCceeecCCCCCCcEEEEEEEEEECCEEe
Q 021429 263 VQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFL 293 (312)
Q Consensus 263 d~----~~~~~~pl~~~~~~~~v~l~~i~vg~~~~ 293 (312)
|+ +++.|+|+. .+.+|.|.|++|+|+++.+
T Consensus 82 d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~ 115 (241)
T 1lya_B 82 DSKYYKGSLSYLNVT-RKAYWQVHLDQVEVASGLT 115 (241)
T ss_dssp CGGGEEEEEEEEECS-SBTTBEEEEEEEEETTSCE
T ss_pred CHHHcCCceEEEECc-cccEEEEEEeEEEECCeeE
Confidence 95 578999996 4679999999999999875
No 37
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=89.12 E-value=0.49 Score=34.67 Aligned_cols=29 Identities=24% Similarity=0.221 Sum_probs=25.1
Q ss_pred EEEEEEeCCCCceEEEEEEcCCCeeeEeCCC
Q 021429 76 YYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQ 106 (312)
Q Consensus 76 Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~ 106 (312)
-++.+.|| +|.+++++|||.+++-+...+
T Consensus 9 P~vtvkI~--Gq~~eaLLDTGAD~TVl~~~~ 37 (99)
T 2hs1_A 9 PLVTIKIG--GQLKEALLDTGADDTIIEEMS 37 (99)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSEEESCCS
T ss_pred CEEEEEEC--CEEEEEEeccCCCcEEEeccc
Confidence 36789999 999999999999999997543
No 38
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=88.09 E-value=0.5 Score=34.98 Aligned_cols=28 Identities=21% Similarity=0.146 Sum_probs=24.8
Q ss_pred eEEEEEEeCCCCceEEEEEEcCCCeeeEeC
Q 021429 75 LYYAKIGIGTPPKDYYVQVDTGSDIMWVNC 104 (312)
Q Consensus 75 ~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~ 104 (312)
.-++.+.|| +|.+.+++|||++++-+..
T Consensus 8 RP~v~v~I~--Gq~~e~LLDTGAD~TVl~~ 35 (104)
T 1fmb_A 8 RPTTIVLIN--DTPLNVLLDTGADTSVLTT 35 (104)
T ss_dssp CCEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred CCEEEEEEC--CEEEEEEeccCCCcEEEcc
Confidence 457889999 9999999999999999873
No 39
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=87.13 E-value=0.76 Score=33.60 Aligned_cols=29 Identities=28% Similarity=0.149 Sum_probs=25.0
Q ss_pred EEEEEEeCCCCceEEEEEEcCCCeeeEeCCC
Q 021429 76 YYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQ 106 (312)
Q Consensus 76 Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~ 106 (312)
-++.+.|| +|.+.+++|||.+++-+...+
T Consensus 9 P~vti~I~--Gq~~e~LLDTGAD~TVl~~~~ 37 (99)
T 3ec0_A 9 PVVTAYIE--GQPVEVLLDTGADDSIVAGIE 37 (99)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEESSCC
T ss_pred CeEEEEEC--CEEEEEEEecCCCceEEcCcc
Confidence 36789999 999999999999999996543
No 40
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=85.07 E-value=0.83 Score=35.68 Aligned_cols=31 Identities=26% Similarity=0.300 Sum_probs=27.6
Q ss_pred CceeEEEEEEeCCCCceEEEEEEcCCCeeeEeC
Q 021429 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNC 104 (312)
Q Consensus 72 ~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~ 104 (312)
..+.+++++.|+ ++++.+++|||++.+-+..
T Consensus 23 ~~~~~~v~v~In--G~~~~~LvDTGAs~s~is~ 53 (148)
T 2i1a_A 23 QVPMLYINIEIN--NYPVKAFVDTGAQTTIMST 53 (148)
T ss_dssp CCCCCEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred ccceEEEEEEEC--CEEEEEEEECCCCccccCH
Confidence 467899999999 8999999999999988864
No 41
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=84.70 E-value=0.79 Score=34.31 Aligned_cols=31 Identities=23% Similarity=0.298 Sum_probs=26.1
Q ss_pred EEEEEeC---CCCceEEEEEEcCCCeeeEeCCCC
Q 021429 77 YAKIGIG---TPPKDYYVQVDTGSDIMWVNCIQC 107 (312)
Q Consensus 77 ~~~i~iG---tP~q~~~v~~DTGS~~~Wv~~~~c 107 (312)
.+.|.|| +|+|.+..++|||.+++-+...++
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~l 45 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIALF 45 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGS
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecccC
Confidence 5667777 789999999999999999987554
No 42
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=81.60 E-value=1.3 Score=33.30 Aligned_cols=27 Identities=26% Similarity=0.154 Sum_probs=23.6
Q ss_pred eEEEEEEeCCCCceEEEEEEcCCCeeeEeC
Q 021429 75 LYYAKIGIGTPPKDYYVQVDTGSDIMWVNC 104 (312)
Q Consensus 75 ~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~ 104 (312)
.-++ +.|| +|.+++++|||.+++-+..
T Consensus 14 rP~v-ikI~--Gq~~eaLLDTGAD~TVi~~ 40 (116)
T 2hah_A 14 PEIL-IFVN--GYPIKFLLDTGADITVLNR 40 (116)
T ss_dssp CEEE-EEET--TEEEEEEECTTCSSCEEEG
T ss_pred CCEE-EEEC--CEEEEEEecCCCCcEEEcc
Confidence 4456 9999 9999999999999999875
No 43
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=79.89 E-value=1.5 Score=34.43 Aligned_cols=32 Identities=16% Similarity=0.257 Sum_probs=27.7
Q ss_pred CceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCC
Q 021429 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCI 105 (312)
Q Consensus 72 ~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~ 105 (312)
....|++++.|. ++++++++|||++.+.+...
T Consensus 21 ~~~~l~v~~~In--g~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 21 QVTMLYINCKVN--GHPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp -CCCCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred ccCEEEEEEEEC--CEEEEEEEeCCCCcEeeCHH
Confidence 356889999998 99999999999999998754
No 44
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=78.95 E-value=2 Score=32.22 Aligned_cols=31 Identities=13% Similarity=0.129 Sum_probs=26.3
Q ss_pred eEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCC
Q 021429 75 LYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQC 107 (312)
Q Consensus 75 ~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~c 107 (312)
.-.+.+.|| +|.+.+++|||.+++-+...+.
T Consensus 9 RP~vti~I~--Gq~~eaLLDTGADdTVi~~~~l 39 (114)
T 3sqf_A 9 KPSLTLWLD--DKMFTGLINTGADVTIIKLEDW 39 (114)
T ss_dssp CCEEEEEET--TEEEEEEECTTCSSCEEEGGGS
T ss_pred CCeEEEEEC--CEEEEEEEccCCCceEEecccC
Confidence 346789999 9999999999999999976543
No 45
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=73.88 E-value=3.9 Score=31.44 Aligned_cols=32 Identities=16% Similarity=0.046 Sum_probs=27.1
Q ss_pred ceeEEEEEEeCCCCceEEEEEEcCCCeeeEeCCC
Q 021429 73 VGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQ 106 (312)
Q Consensus 73 ~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~ 106 (312)
...-++.+.|+ +|++.+++|||.+++-+...+
T Consensus 20 ~~RP~v~i~I~--G~~~~~LlDTGAd~tVl~~~~ 51 (132)
T 3slz_A 20 PPEPRITLKVG--GQPVTFLVDTGAQHSVLTQNP 51 (132)
T ss_dssp CCSSEEEEEET--TEEEEEEECTTCSSCEECSCC
T ss_pred cCCCEEEEEEC--CEEEEEEEeCCCCeEEEcccc
Confidence 45668889999 999999999999999997543
No 46
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=67.65 E-value=5.3 Score=30.35 Aligned_cols=23 Identities=17% Similarity=0.148 Sum_probs=19.6
Q ss_pred eCCCCceEEEEEEcCCCeeeEeCCC
Q 021429 82 IGTPPKDYYVQVDTGSDIMWVNCIQ 106 (312)
Q Consensus 82 iGtP~q~~~v~~DTGS~~~Wv~~~~ 106 (312)
|| +|.+.+++|||.+++-+...+
T Consensus 27 i~--gq~~eaLLDTGAD~TVl~~~~ 49 (124)
T 2rsp_A 27 QR--SVYITALLDSGADITIISEED 49 (124)
T ss_dssp CS--EEEEEEEECTTCSSCEEETTT
T ss_pred CC--CEEEEEEecCCCCcEEEeccc
Confidence 66 788899999999999998644
No 47
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=65.97 E-value=5.2 Score=33.13 Aligned_cols=28 Identities=25% Similarity=0.163 Sum_probs=24.7
Q ss_pred eEEEEEEeCCCCceEEEEEEcCCCeeeEeC
Q 021429 75 LYYAKIGIGTPPKDYYVQVDTGSDIMWVNC 104 (312)
Q Consensus 75 ~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~ 104 (312)
.-.+.+.|| +|.+.+++|||.+++-+..
T Consensus 8 RP~vtv~I~--Gq~~e~LLDTGAD~TVl~~ 35 (203)
T 3ka2_A 8 RPLVTIRIG--GQLKEALLDTGADDTVIEE 35 (203)
T ss_dssp CCEEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred CCeEEEEEC--CEEEEEEEecCCCceEEec
Confidence 447889999 9999999999999998864
No 48
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=46.10 E-value=23 Score=29.18 Aligned_cols=28 Identities=25% Similarity=0.163 Sum_probs=24.6
Q ss_pred eEEEEEEeCCCCceEEEEEEcCCCeeeEeC
Q 021429 75 LYYAKIGIGTPPKDYYVQVDTGSDIMWVNC 104 (312)
Q Consensus 75 ~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~ 104 (312)
.-.+.+.|| +|.+.+++|||.+++-+..
T Consensus 112 rP~~~iki~--Gq~~e~LlDTGAD~TVl~~ 139 (203)
T 3ka2_A 112 RPLVTIRIG--GQLKEALLDTGADDTVIEE 139 (203)
T ss_dssp CCEEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred CCcEEEEEC--CEEEeeeecccCCceeeec
Confidence 457889999 8999999999999998864
No 49
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=31.11 E-value=44 Score=27.77 Aligned_cols=31 Identities=13% Similarity=0.097 Sum_probs=22.6
Q ss_pred eeEEEE---EEeCC-----CCceEEEEEEcCCCeeeEeC
Q 021429 74 GLYYAK---IGIGT-----PPKDYYVQVDTGSDIMWVNC 104 (312)
Q Consensus 74 ~~Y~~~---i~iGt-----P~q~~~v~~DTGS~~~Wv~~ 104 (312)
+.|.++ |.||. +.....++||||++.+++|.
T Consensus 188 ~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~ 226 (239)
T 1b5f_A 188 YYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPT 226 (239)
T ss_dssp TTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECH
T ss_pred CeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCH
Confidence 455554 66774 13456899999999999985
No 50
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=24.24 E-value=69 Score=26.39 Aligned_cols=33 Identities=15% Similarity=0.238 Sum_probs=23.5
Q ss_pred eeEEE---EEEeCCC----CceEEEEEEcCCCeeeEeCCC
Q 021429 74 GLYYA---KIGIGTP----PKDYYVQVDTGSDIMWVNCIQ 106 (312)
Q Consensus 74 ~~Y~~---~i~iGtP----~q~~~v~~DTGS~~~Wv~~~~ 106 (312)
..|.+ .|.||.- .....+++|||++.+++|...
T Consensus 99 ~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~~ 138 (241)
T 1lya_B 99 AYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVDE 138 (241)
T ss_dssp TTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHHH
T ss_pred cEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHHH
Confidence 44555 4667752 345689999999999998743
No 51
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=21.42 E-value=62 Score=28.26 Aligned_cols=34 Identities=15% Similarity=0.219 Sum_probs=25.2
Q ss_pred ceeEEEE---EEeCC---CCceEEEEEEcCCCeeeEeCCC
Q 021429 73 VGLYYAK---IGIGT---PPKDYYVQVDTGSDIMWVNCIQ 106 (312)
Q Consensus 73 ~~~Y~~~---i~iGt---P~q~~~v~~DTGS~~~Wv~~~~ 106 (312)
.+.|.++ |.||. +.....++||||++.+++|...
T Consensus 192 ~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lp~~~ 231 (329)
T 3c9x_A 192 QGFWEFTASGYSVGGGKLNRNSIDGIADTGTTLLLLDDNV 231 (329)
T ss_dssp TSSCEEEECCEEETTCCCCSCCEEEEECTTCCSEEECHHH
T ss_pred CceEEEEEeeEEECCEeccCCCceEEEECCCCcEeCCHHH
Confidence 3456665 56775 2456899999999999998743
Done!