Query 021430
Match_columns 312
No_of_seqs 190 out of 1399
Neff 6.4
Searched_HMMs 46136
Date Fri Mar 29 02:53:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021430.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021430hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03030 cationic peroxidase; 100.0 2E-104 4E-109 751.3 25.3 292 18-312 20-324 (324)
2 cd00693 secretory_peroxidase H 100.0 1.1E-97 2E-102 703.1 25.3 290 22-311 1-298 (298)
3 PF00141 peroxidase: Peroxidas 100.0 4.5E-73 9.7E-78 518.8 10.6 228 39-280 1-230 (230)
4 PLN02608 L-ascorbate peroxidas 100.0 2.2E-67 4.8E-72 492.1 22.4 224 37-307 15-255 (289)
5 cd00691 ascorbate_peroxidase A 100.0 3.4E-66 7.3E-71 478.7 20.9 226 34-299 11-249 (253)
6 PLN02364 L-ascorbate peroxidas 100.0 4.5E-65 9.7E-70 469.8 20.6 228 26-299 4-246 (250)
7 cd00692 ligninase Ligninase an 100.0 3.5E-64 7.7E-69 478.1 22.9 235 35-312 16-287 (328)
8 PLN02879 L-ascorbate peroxidas 100.0 3.3E-63 7.1E-68 456.8 21.6 217 37-299 18-246 (251)
9 cd00314 plant_peroxidase_like 100.0 9.9E-60 2.2E-64 436.3 19.6 222 38-297 2-255 (255)
10 cd00649 catalase_peroxidase_1 100.0 1.5E-56 3.2E-61 432.6 20.4 265 22-299 28-394 (409)
11 TIGR00198 cat_per_HPI catalase 100.0 1.6E-53 3.4E-58 434.8 21.3 265 22-299 38-399 (716)
12 PRK15061 catalase/hydroperoxid 100.0 1.4E-50 3E-55 411.2 20.6 263 22-297 40-403 (726)
13 cd08201 plant_peroxidase_like_ 100.0 2.3E-51 4.9E-56 378.2 12.4 219 39-297 27-264 (264)
14 cd08200 catalase_peroxidase_2 100.0 3.3E-41 7.2E-46 314.3 18.5 220 40-299 16-296 (297)
15 TIGR00198 cat_per_HPI catalase 100.0 9.5E-36 2E-40 304.5 18.2 218 39-299 430-709 (716)
16 PRK15061 catalase/hydroperoxid 100.0 2.3E-35 4.9E-40 300.3 19.0 220 40-299 441-721 (726)
17 COG0376 KatG Catalase (peroxid 100.0 1.3E-29 2.8E-34 248.2 17.7 249 38-299 71-416 (730)
18 COG0376 KatG Catalase (peroxid 99.5 1.8E-13 3.9E-18 135.3 12.4 215 41-299 452-725 (730)
19 PTZ00411 transaldolase-like pr 77.5 37 0.0008 33.2 11.7 72 131-221 179-264 (333)
20 PRK05269 transaldolase B; Prov 53.4 1.3E+02 0.0028 29.2 10.0 49 131-179 169-221 (318)
21 PF11895 DUF3415: Domain of un 52.3 13 0.00029 28.7 2.5 17 283-299 2-18 (80)
22 TIGR00874 talAB transaldolase. 50.4 1.8E+02 0.0039 28.2 10.5 128 130-285 166-310 (317)
23 PRK12309 transaldolase/EF-hand 47.0 1.7E+02 0.0036 29.3 9.9 48 131-178 173-224 (391)
24 KOG4065 Uncharacterized conser 30.7 1.4E+02 0.0031 25.0 5.5 62 23-105 34-95 (144)
25 PRK12346 transaldolase A; Prov 28.5 60 0.0013 31.5 3.4 89 115-222 150-254 (316)
26 PF09533 DUF2380: Predicted li 26.7 56 0.0012 29.2 2.6 26 164-189 107-132 (188)
27 PF04225 OapA: Opacity-associa 25.2 53 0.0011 25.4 2.0 25 164-188 10-34 (85)
28 PF08782 c-SKI_SMAD_bind: c-SK 23.5 24 0.00052 28.3 -0.2 15 61-76 4-18 (96)
29 PRK01844 hypothetical protein; 22.8 1.5E+02 0.0032 22.6 3.9 28 38-65 24-51 (72)
30 cd00957 Transaldolase_TalAB Tr 21.0 1.1E+02 0.0023 29.7 3.6 64 115-178 149-218 (313)
31 COG3763 Uncharacterized protei 20.0 1.2E+02 0.0027 22.9 2.9 29 38-66 24-52 (71)
No 1
>PLN03030 cationic peroxidase; Provisional
Probab=100.00 E-value=1.9e-104 Score=751.31 Aligned_cols=292 Identities=43% Similarity=0.785 Sum_probs=275.3
Q ss_pred cCCCcCCccccccCCCCHHHHHHHHHHHHHHcCCCchhhhhHhhhccccCCCCCceEeccCCCCCCCCcCCCCCCCCchH
Q 021430 18 SSGNALSLNYYEKTCPDAEWIIAAAVKAAAAKDKTVPAALLRMHFHDCFIRGCDASVLLNSKGSNKAEKDGPPNVSLHAF 97 (312)
Q Consensus 18 ~~~~~l~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~aa~llRL~FHDcfv~GcDgSill~~~~~~~~E~~~~~N~~L~g~ 97 (312)
.+.++|+++||++|||++|+||++.|++++.++|+++|++|||+||||||+||||||||+++ .+||++++|.+|+||
T Consensus 20 ~~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~---~~Ek~a~~N~~l~Gf 96 (324)
T PLN03030 20 VQGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGS---NTEKTALPNLLLRGY 96 (324)
T ss_pred chhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCC---cccccCCCCcCcchH
Confidence 33467999999999999999999999999999999999999999999999999999999964 369999999999999
Q ss_pred HHHHHHHHHHHhhCCCCccHHHHHHHhhHhHHhhcCCCccccCCCCcCCCCCCccccCCCCCCCCChHHHHHHHHhcCCC
Q 021430 98 YVIDNAKKQVETLCPGVVSCADILALAARDAVVLSGGPTWDVPKGRKDGRTSKASETVQLPAPTFNISQLQQSFSQRGLS 177 (312)
Q Consensus 98 ~~I~~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F~~~Gl~ 177 (312)
++|+.||+++|+.||++|||||||+|||||||+++|||.|+|++||||+++|.+.++.+||+|+.++++|++.|+++||+
T Consensus 97 ~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~~LP~p~~~~~~l~~~F~~~Gl~ 176 (324)
T PLN03030 97 DVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDASNLPGFTDSIDVQKQKFAAKGLN 176 (324)
T ss_pred HHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCcccccCCcCCCCCHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999999999997766578999999999999999999999
Q ss_pred hhhHHhhccCcccccccccCCcccccC--C---CCCCCCCHHHHHHHhhhCCCCCCCCCCCCCCCCCCcccchHHHHhhc
Q 021430 178 MEDLAALSGGHTLGFAHCSSFQSRINT--N---NADPTINPSFAESLRNICPIHNQAKNAGANMDASSATFDNTYYKLIL 252 (312)
Q Consensus 178 ~~elVaLsGaHtiG~~hc~~f~~Rl~~--~---~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDn~Yy~~l~ 252 (312)
.+|||+||||||||++||.+|.+|||+ + .+||+||+.|++.|++.||..+...+.+++|+.||.+|||+||++|+
T Consensus 177 ~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~nll 256 (324)
T PLN03030 177 TQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRRIALDTGSSNRFDASFFSNLK 256 (324)
T ss_pred HHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCccccCCCCCCcccccHHHHHHH
Confidence 999999999999999999999999993 2 36999999999999999996333334688999999999999999999
Q ss_pred cCcccchhhhhhcCCcchHHHHHHhhcCh----HHHHHHHHHHHHHhhCCC--CCc--cccccCccCC
Q 021430 253 QGKSLFASDQALLSHPETKNLVSKFASSH----QSFNEAFVKSMIKMSSIN--GGQ--EVRKDCRVVN 312 (312)
Q Consensus 253 ~~~glL~SD~~L~~d~~t~~~V~~yA~d~----~~F~~~Fa~Am~Km~~lg--tg~--eiR~~C~~~n 312 (312)
.++|+|+|||+|++|++|+++|++||.|+ +.|+++|++||+|||+|+ ||+ ||||+|+++|
T Consensus 257 ~~rGlL~SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C~~vN 324 (324)
T PLN03030 257 NGRGILESDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKVCSAIN 324 (324)
T ss_pred hcCCCcCCchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceeccccccC
Confidence 99999999999999999999999999875 599999999999999999 997 9999999998
No 2
>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=1.1e-97 Score=703.08 Aligned_cols=290 Identities=53% Similarity=0.940 Sum_probs=277.6
Q ss_pred cCCccccccCCCCHHHHHHHHHHHHHHcCCCchhhhhHhhhccccCCCCCceEeccCCCCCCCCcCCCCCCCCchHHHHH
Q 021430 22 ALSLNYYEKTCPDAEWIIAAAVKAAAAKDKTVPAALLRMHFHDCFIRGCDASVLLNSKGSNKAEKDGPPNVSLHAFYVID 101 (312)
Q Consensus 22 ~l~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~aa~llRL~FHDcfv~GcDgSill~~~~~~~~E~~~~~N~~L~g~~~I~ 101 (312)
||+++||++|||++|+||++.|++.+.++++++|++|||+||||||+||||||||++++++.+|+++++|.+|+||++|+
T Consensus 1 ~L~~~~Y~~sCP~~e~iV~~~v~~~~~~~~~~a~~~lRl~FHDc~v~GcDaSill~~~~~~~~E~~~~~N~~l~g~~~i~ 80 (298)
T cd00693 1 QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTANNTSEKDAPPNLSLRGFDVID 80 (298)
T ss_pred CCCcccccCCCCChHHHHHHHHHHHHHhCCCcCchhhhhhhHhhhccCcceeEEecCCCCCchhccCCCCCCcchhHHHH
Confidence 69999999999999999999999999999999999999999999999999999999987778999999999999999999
Q ss_pred HHHHHHHhhCCCCccHHHHHHHhhHhHHhhcCCCccccCCCCcCCCCCCccccCCCCCCCCChHHHHHHHHhcCCChhhH
Q 021430 102 NAKKQVETLCPGVVSCADILALAARDAVVLSGGPTWDVPKGRKDGRTSKASETVQLPAPTFNISQLQQSFSQRGLSMEDL 181 (312)
Q Consensus 102 ~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~el 181 (312)
.||+++|+.||++|||||||+||||+||+.+|||.|+|++||+|+.++.+..++.||+|+.+++++++.|+++||+++||
T Consensus 81 ~iK~~~e~~cp~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F~~~G~~~~d~ 160 (298)
T cd00693 81 DIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPLGRRDGRVSSANDVGNLPSPFFSVSQLISLFASKGLTVTDL 160 (298)
T ss_pred HHHHHHHhhCCCcccHHHHHHHhhhhceeccCCCcccccCCCcCCcccCcccccCCCCcccCHHHHHHHHHHcCCCHHHh
Confidence 99999999999999999999999999999999999999999999998876544689999999999999999999999999
Q ss_pred HhhccCcccccccccCCccccc----CCCCCCCCCHHHHHHHhhhCCCCCCCCCCCCCCCCCCcccchHHHHhhccCccc
Q 021430 182 AALSGGHTLGFAHCSSFQSRIN----TNNADPTINPSFAESLRNICPIHNQAKNAGANMDASSATFDNTYYKLILQGKSL 257 (312)
Q Consensus 182 VaLsGaHtiG~~hc~~f~~Rl~----~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDn~Yy~~l~~~~gl 257 (312)
|||+||||||++||.+|.+|+| ++.+||+|++.|+..|+..||..+...+.++||+.||.+|||+||++++.++|+
T Consensus 161 VaL~GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~~l~~~~gl 240 (298)
T cd00693 161 VALSGAHTIGRAHCSSFSDRLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTLVPLDPGTPNTFDNSYYKNLLAGRGL 240 (298)
T ss_pred eeecccceeeeeecccccccccCCCCCCCCCCCccHHHHHHhcCCCCCCCCCCccccCCCCCCCccccHHHHHHHhcccC
Confidence 9999999999999999999998 245899999999999999999754455678999999999999999999999999
Q ss_pred chhhhhhcCCcchHHHHHHhhcChHHHHHHHHHHHHHhhCCC--CCc--cccccCccC
Q 021430 258 FASDQALLSHPETKNLVSKFASSHQSFNEAFVKSMIKMSSIN--GGQ--EVRKDCRVV 311 (312)
Q Consensus 258 L~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lg--tg~--eiR~~C~~~ 311 (312)
|+|||+|+.|++|+++|++||.|++.|+++|++||+||++|| ||. |||++|+++
T Consensus 241 L~SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Kl~~l~v~tg~~GeiR~~C~~~ 298 (298)
T cd00693 241 LTSDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNCRVV 298 (298)
T ss_pred ccCCHHhccCccHHHHHHHHhhCHHHHHHHHHHHHHHHhhcCCccCCCCccCCccccC
Confidence 999999999999999999999999999999999999999999 997 999999975
No 3
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Most haem peroxidases follow the reaction scheme: Fe3+ + H2O2 --> [Fe4+=O]R' (Compound I) + H2O [Fe4+=O]R' + substrate --> [Fe4+=O]R (Compound II) + oxidised substrate [Fe4+=O]R + substrate --> Fe3+ + H2O + oxidised substrate In this mechanism, the enzyme reacts with one equivalent of H2O2 to give [Fe4+=O]R' (compound I). This is a two-electron oxidation/reduction reaction where H2O2 is reduced to water and the enzyme is oxidised. One oxidising equivalent resides on iron, giving the oxyferryl [] intermediate, while in many peroxidases the porphyrin (R) is oxidised to the porphyrin pi-cation radical (R'). Compound I then oxidises an organic substrate to give a substrate radical []. Haem peroxidases include two superfamilies: one found in bacteria, fungi, plants and the second found in animals. The first one can be viewed as consisting of 3 major classes []. Class I, the intracellular peroxidases, includes: yeast cytochrome c peroxidase (CCP), a soluble protein found in the mitochondrial electron transport chain, where it probably protects against toxic peroxides; ascorbate peroxidase (AP), the main enzyme responsible for hydrogen peroxide removal in chloroplasts and cytosol of higher plants; and bacterial catalase- peroxidases, exhibiting both peroxidase and catalase activities. It is thought that catalase-peroxidase provides protection to cells under oxidative stress []. Class II consists of secretory fungal peroxidases: ligninases, or lignin peroxidases (LiPs), and manganese-dependent peroxidases (MnPs). These are monomeric glycoproteins involved in the degradation of lignin. In MnP, Mn2+ serves as the reducing substrate []. Class II proteins contain four conserved disulphide bridges and two conserved calcium-binding sites. Class III consists of the secretory plant peroxidases, which have multiple tissue-specific functions: e.g., removal of hydrogen peroxide from chloroplasts and cytosol; oxidation of toxic compounds; biosynthesis of the cell wall; defence responses towards wounding; indole-3-acetic acid (IAA) catabolism; ethylene biosynthesis; and so on. Class III proteins are also monomeric glycoproteins, containing four conserved disulphide bridges and two calcium ions, although the placement of the disulphides differs from class II enzymes. The crystal structures of a number of these proteins show that they share the same architecture - two all-alpha domains between which the haem group is embedded. ; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1QPA_B 2DV2_A 2B2R_B 1MWV_B 2FXJ_A 2FXG_A 2B2O_B 1X7U_B 2B2Q_A 2FXH_A ....
Probab=100.00 E-value=4.5e-73 Score=518.77 Aligned_cols=228 Identities=50% Similarity=0.853 Sum_probs=209.2
Q ss_pred HHHHHHHHHHcCCCchhhhhHhhhccccC-CCCCceEeccCCCCCCCCcCCCCCCCCc-hHHHHHHHHHHHHhhCCCCcc
Q 021430 39 IAAAVKAAAAKDKTVPAALLRMHFHDCFI-RGCDASVLLNSKGSNKAEKDGPPNVSLH-AFYVIDNAKKQVETLCPGVVS 116 (312)
Q Consensus 39 Vr~~v~~~~~~~~~~aa~llRL~FHDcfv-~GcDgSill~~~~~~~~E~~~~~N~~L~-g~~~I~~iK~~le~~cp~~VS 116 (312)
||+.|++++.++++++|+||||+|||||+ +|||||||+. .+|+++++|.+|+ ++++|++||+++|++||++||
T Consensus 1 Vr~~v~~~~~~~~~~~~~~lRl~FHDc~~~~GcDgSil~~-----~~e~~~~~N~gl~~~~~~i~~ik~~~~~~cp~~VS 75 (230)
T PF00141_consen 1 VRSDVRAAFKKDPTLAPGLLRLAFHDCFVYGGCDGSILLF-----SAEKDAPPNRGLRDGFDVIDPIKAKLEAACPGVVS 75 (230)
T ss_dssp HHHHHHHHHHHHTTSHHHHHHHHHHHHTTHTSSSSGGGGS-----TTGGGSGGGTTHHHHHHHHHHHHHHHCHHSTTTS-
T ss_pred CHHHHHHHHHHCcCccHHHHHHHccccccccccccceecc-----ccccccccccCcceeeechhhHHhhhcccccCCCC
Confidence 89999999999999999999999999999 9999999983 4799999999997 999999999999999999999
Q ss_pred HHHHHHHhhHhHHhhcCCCccccCCCCcCCCCCCccccCCCCCCCCChHHHHHHHHhcCCChhhHHhhccCccccccccc
Q 021430 117 CADILALAARDAVVLSGGPTWDVPKGRKDGRTSKASETVQLPAPTFNISQLQQSFSQRGLSMEDLAALSGGHTLGFAHCS 196 (312)
Q Consensus 117 cADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~elVaLsGaHtiG~~hc~ 196 (312)
|||||+||||+||+.+|||.|+|++||+|+.++++.++.+||.|+.++++|++.|+++|||++|||||+||||||++||.
T Consensus 76 ~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~e~VaLsGaHTiG~~~c~ 155 (230)
T PF00141_consen 76 CADIIALAARDAVELCGGPRIPVPLGRRDGTVSSPSGASNLPSPTDSVDQLLAFFARKGLSAEEMVALSGAHTIGRAHCS 155 (230)
T ss_dssp HHHHHHHHHHHHHHHTTGGHSHBEB-EBB-SSGGHHHHHHSSTTTSHHHHHHHHHHHTT--HHHHHHHHGGGGSTEESGG
T ss_pred HHHHHHHHhhhcccccccccccccccccccccccccccccccccccccchhhhhhhccccchhhhcceecccccccceec
Confidence 99999999999999999999999999999999998543469999999999999999999999999999999999999999
Q ss_pred CCcccccCCCCCCCCCHHHHHHHhhhCCCCCCCCCCCCCCCCCCcccchHHHHhhccCcccchhhhhhcCCcchHHHHHH
Q 021430 197 SFQSRINTNNADPTINPSFAESLRNICPIHNQAKNAGANMDASSATFDNTYYKLILQGKSLFASDQALLSHPETKNLVSK 276 (312)
Q Consensus 197 ~f~~Rl~~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDn~Yy~~l~~~~glL~SD~~L~~d~~t~~~V~~ 276 (312)
+|. |+| ..+||+|++.|+.. .| ..+.+. .+++| ||.+|||+||+++++++|+|+||++|++|++|+++|++
T Consensus 156 ~f~-rl~-~~~dp~~d~~~~~~---~C-~~~~~~-~~~~d--tp~~fDN~Yy~~ll~~~gll~SD~~L~~d~~t~~~V~~ 226 (230)
T PF00141_consen 156 SFS-RLY-FPPDPTMDPGYAGQ---NC-NSGGDN-GVPLD--TPTVFDNSYYKNLLNGRGLLPSDQALLNDPETRPIVER 226 (230)
T ss_dssp CTG-GTS-CSSGTTSTHHHHHH---SS-STSGCT-CEESS--STTS-SSHHHHHHHHTEEEEHHHHHHHHSTTHHHHHHH
T ss_pred ccc-ccc-ccccccccccccee---cc-CCCccc-ccccc--CCCcchhHHHHHHhcCCCcCHHHHHHhcCHHHHHHHHH
Confidence 999 999 47899999999988 99 444333 77888 99999999999999999999999999999999999999
Q ss_pred hhcC
Q 021430 277 FASS 280 (312)
Q Consensus 277 yA~d 280 (312)
||+|
T Consensus 227 yA~d 230 (230)
T PF00141_consen 227 YAQD 230 (230)
T ss_dssp HHHT
T ss_pred HhcC
Confidence 9976
No 4
>PLN02608 L-ascorbate peroxidase
Probab=100.00 E-value=2.2e-67 Score=492.05 Aligned_cols=224 Identities=30% Similarity=0.418 Sum_probs=202.4
Q ss_pred HHHHHHHHHHHHcCCCchhhhhHhhhcccc-------CCCCCceEeccCCCCCCCCcCCCCCCCC-chHHHHHHHHHHHH
Q 021430 37 WIIAAAVKAAAAKDKTVPAALLRMHFHDCF-------IRGCDASVLLNSKGSNKAEKDGPPNVSL-HAFYVIDNAKKQVE 108 (312)
Q Consensus 37 ~iVr~~v~~~~~~~~~~aa~llRL~FHDcf-------v~GcDgSill~~~~~~~~E~~~~~N~~L-~g~~~I~~iK~~le 108 (312)
+.+++.+ ..+.++|+++|.+|||+||||| ++||||||+++ +|+++++|.|| +|+++|++||+++
T Consensus 15 ~~~~~~~-~~~~~d~~~a~~llRLaFHDc~t~d~~~~~gGcDgSIll~------~E~~~~~N~gL~~g~~vid~iK~~~- 86 (289)
T PLN02608 15 EKARRDL-RALIASKNCAPIMLRLAWHDAGTYDAKTKTGGPNGSIRNE------EEYSHGANNGLKIAIDLCEPVKAKH- 86 (289)
T ss_pred HHHHHHH-HHHHHCCCcHHHHHHHhhhhcCCcCCCCCCCCCCeeeecc------cccCCccccchHHHHHHHHHHHHHc-
Confidence 4556666 4477899999999999999999 89999999984 69999999999 6999999999997
Q ss_pred hhCCCCccHHHHHHHhhHhHHhhcCCCccccCCCCcCCCCCCccccCCCCCCCCChHHHHHHHHhcCCChhhHHhhccCc
Q 021430 109 TLCPGVVSCADILALAARDAVVLSGGPTWDVPKGRKDGRTSKASETVQLPAPTFNISQLQQSFSQRGLSMEDLAALSGGH 188 (312)
Q Consensus 109 ~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~elVaLsGaH 188 (312)
++|||||||+||||+||+.+|||.|+|++||+|++++++. ++||+|+.+++++++.|+++||+++|||+|+|||
T Consensus 87 ----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~--~~LP~p~~~~~~l~~~F~~~Gl~~~D~VaLsGAH 160 (289)
T PLN02608 87 ----PKITYADLYQLAGVVAVEVTGGPTIDFVPGRKDSNACPEE--GRLPDAKKGAKHLRDVFYRMGLSDKDIVALSGGH 160 (289)
T ss_pred ----CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCcCCcc--CCCcCCCCCHHHHHHHHHHcCCCHHHHhhhcccc
Confidence 5899999999999999999999999999999999998754 7899999999999999999999999999999999
Q ss_pred ccccccccCCcccc-cCCCCCCCCCHHHHHHHhhhCCCCCCCCCCCCCCCCCCcccchHHHHhhccC--ccc--chhhhh
Q 021430 189 TLGFAHCSSFQSRI-NTNNADPTINPSFAESLRNICPIHNQAKNAGANMDASSATFDNTYYKLILQG--KSL--FASDQA 263 (312)
Q Consensus 189 tiG~~hc~~f~~Rl-~~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDn~Yy~~l~~~--~gl--L~SD~~ 263 (312)
|||++||. |+ |. ++ .+ .||.+|||+||++++.+ +|+ |+||++
T Consensus 161 TiG~ahc~----r~g~~----------------------g~------~~-~Tp~~FDN~Yy~~ll~~~~~gll~L~SD~~ 207 (289)
T PLN02608 161 TLGRAHPE----RSGFD----------------------GP------WT-KEPLKFDNSYFVELLKGESEGLLKLPTDKA 207 (289)
T ss_pred cccccccc----CCCCC----------------------CC------CC-CCCCccChHHHHHHHcCCcCCccccccCHh
Confidence 99999995 43 10 11 12 68999999999999998 788 799999
Q ss_pred hcCCcchHHHHHHhhcChHHHHHHHHHHHHHhhCCC--CCc--ccccc
Q 021430 264 LLSHPETKNLVSKFASSHQSFNEAFVKSMIKMSSIN--GGQ--EVRKD 307 (312)
Q Consensus 264 L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lg--tg~--eiR~~ 307 (312)
|+.|++|+.+|++||.|++.|+++|++||+||++|| ||+ |+-+.
T Consensus 208 L~~d~~T~~~V~~fA~~~~~F~~~Fa~Am~Km~~lgvltg~~Ge~~~~ 255 (289)
T PLN02608 208 LLEDPEFRPYVELYAKDEDAFFRDYAESHKKLSELGFTPPSSAFKKKS 255 (289)
T ss_pred hhcChhHHHHHHHHhhCHHHHHHHHHHHHHHHHcCCCCCCCCCccccc
Confidence 999999999999999999999999999999999999 887 66543
No 5
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water.
Probab=100.00 E-value=3.4e-66 Score=478.69 Aligned_cols=226 Identities=25% Similarity=0.361 Sum_probs=204.6
Q ss_pred CHHHHHHHHHHHHHHcCCCchhhhhHhhhccccCCCCCceEeccCC---CCCCCCcCCCCCCCC-chHHHHHHHHHHHHh
Q 021430 34 DAEWIIAAAVKAAAAKDKTVPAALLRMHFHDCFIRGCDASVLLNSK---GSNKAEKDGPPNVSL-HAFYVIDNAKKQVET 109 (312)
Q Consensus 34 ~~e~iVr~~v~~~~~~~~~~aa~llRL~FHDcfv~GcDgSill~~~---~~~~~E~~~~~N~~L-~g~~~I~~iK~~le~ 109 (312)
..++||++.|++.+. +++++|++|||+||||| +||+|+++++. ..+.+|+++++|.+| +++++|++||+++
T Consensus 11 ~~~~~V~~~v~~~~~-~~~~~~~llRl~FHDc~--~~d~s~~~~G~d~s~~~~~E~~~~~N~~L~~~~~~i~~iK~~~-- 85 (253)
T cd00691 11 KDLEAARNDIAKLID-DKNCAPILVRLAWHDSG--TYDKETKTGGSNGTIRFDPELNHGANAGLDIARKLLEPIKKKY-- 85 (253)
T ss_pred HHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHh--ccccccCCCCCCccccchhhcCCccccchHHHHHHHHHHHHHc--
Confidence 567899999999999 99999999999999999 47777777543 223479999999999 8999999999987
Q ss_pred hCCCCccHHHHHHHhhHhHHhhcCCCccccCCCCcCCCCCCcccc-CCCCCCCCChHHHHHHHHhcCCChhhHHhhccCc
Q 021430 110 LCPGVVSCADILALAARDAVVLSGGPTWDVPKGRKDGRTSKASET-VQLPAPTFNISQLQQSFSQRGLSMEDLAALSGGH 188 (312)
Q Consensus 110 ~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~Gl~~~elVaLsGaH 188 (312)
| +|||||||+||||+||+.+|||.|+|++||+|+.++....+ .+||.|+.++++|++.|+++||+++|||+|+|||
T Consensus 86 --~-~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~d~VaLsGaH 162 (253)
T cd00691 86 --P-DISYADLWQLAGVVAIEEMGGPKIPFRPGRVDASDPEECPPEGRLPDASKGADHLRDVFYRMGFNDQEIVALSGAH 162 (253)
T ss_pred --C-CCCHHHHHHHHHHHHHHHcCCCccCcccCCCCCCcccccCcccCCCCCCCCHHHHHHHHHhcCCCHHHHHHhcccc
Confidence 4 89999999999999999999999999999999999987666 8899999999999999999999999999999999
Q ss_pred ccccccccCCcccccCCCCCCCCCHHHHHHHhhhCCCCCCCCCCCCCCCCCCcccchHHHHhhccCcc--------cchh
Q 021430 189 TLGFAHCSSFQSRINTNNADPTINPSFAESLRNICPIHNQAKNAGANMDASSATFDNTYYKLILQGKS--------LFAS 260 (312)
Q Consensus 189 tiG~~hc~~f~~Rl~~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDn~Yy~~l~~~~g--------lL~S 260 (312)
|||++||..+ . |. +.+ ..||.+|||+||++|+.++| +|+|
T Consensus 163 TiG~a~c~~~--~-~~----------------------g~~-------~~tp~~FDn~Yy~~ll~~~g~~~~~~~~~L~s 210 (253)
T cd00691 163 TLGRCHKERS--G-YD----------------------GPW-------TKNPLKFDNSYFKELLEEDWKLPTPGLLMLPT 210 (253)
T ss_pred eeecccccCC--C-CC----------------------CCC-------CCCCCcccHHHHHHHhcCCCccCcCcceechh
Confidence 9999999531 0 10 111 15899999999999999999 9999
Q ss_pred hhhhcCCcchHHHHHHhhcChHHHHHHHHHHHHHhhCCC
Q 021430 261 DQALLSHPETKNLVSKFASSHQSFNEAFVKSMIKMSSIN 299 (312)
Q Consensus 261 D~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lg 299 (312)
|++|+.|++|+.+|++||.|++.|+++|++||+||+++|
T Consensus 211 D~~L~~d~~t~~~v~~~a~~~~~F~~~Fa~Am~Km~~l~ 249 (253)
T cd00691 211 DKALLEDPKFRPYVELYAKDQDAFFKDYAEAHKKLSELG 249 (253)
T ss_pred hHHHHcCccHHHHHHHHhhCHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999997
No 6
>PLN02364 L-ascorbate peroxidase 1
Probab=100.00 E-value=4.5e-65 Score=469.81 Aligned_cols=228 Identities=30% Similarity=0.474 Sum_probs=205.2
Q ss_pred cccccC--CCCHHHHHHHHHHHHHHcCCCchhhhhHhhhc-----cccCC--CCCceEeccCCCCCCCCcCCCCCCCC-c
Q 021430 26 NYYEKT--CPDAEWIIAAAVKAAAAKDKTVPAALLRMHFH-----DCFIR--GCDASVLLNSKGSNKAEKDGPPNVSL-H 95 (312)
Q Consensus 26 ~fY~~s--CP~~e~iVr~~v~~~~~~~~~~aa~llRL~FH-----Dcfv~--GcDgSill~~~~~~~~E~~~~~N~~L-~ 95 (312)
+||... |+.+++.+++.+++.+ .+++++|.||||+|| ||+++ ||||||.. .+|+++++|.+| +
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~lRl~FHd~~t~dc~~~~GG~dgSi~~------~~E~~~~~N~gl~~ 76 (250)
T PLN02364 4 NYPTVSEDYKKAVEKCRRKLRGLI-AEKNCAPIMVRLAWHSAGTFDCQSRTGGPFGTMRF------DAEQAHGANSGIHI 76 (250)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHH-hCCCcHHHHHHHHHccccCcCcCCCCCCCCccccc------cccccCCCccCHHH
Confidence 455533 7889999999999977 789999999999999 88876 99999954 369999999999 8
Q ss_pred hHHHHHHHHHHHHhhCCCCccHHHHHHHhhHhHHhhcCCCccccCCCCcCCCCCCccccCCCCCCCCChHHHHHHHHh-c
Q 021430 96 AFYVIDNAKKQVETLCPGVVSCADILALAARDAVVLSGGPTWDVPKGRKDGRTSKASETVQLPAPTFNISQLQQSFSQ-R 174 (312)
Q Consensus 96 g~~~I~~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F~~-~ 174 (312)
||++|+.||+++ ++|||||||+||||+||+++|||.|+|++||+|++++++. ++||.|+.++++|++.|++ +
T Consensus 77 ~~~~i~~ik~~~-----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~--~~lP~p~~~~~~l~~~F~~~~ 149 (250)
T PLN02364 77 ALRLLDPIREQF-----PTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQPPPE--GRLPDATKGCDHLRDVFAKQM 149 (250)
T ss_pred HHHHHHHHHHHc-----CCcCHHHHHHHHHHHHHHhcCCCeeCCCCCCCCccccccc--CCCCCCCcCHHHHHHHHHHhc
Confidence 999999999998 5999999999999999999999999999999999998764 6899999999999999997 5
Q ss_pred CCChhhHHhhccCcccccccccCCcccccCCCCCCCCCHHHHHHHhhhCCCCCCCCCCCCCCCCCCcccchHHHHhhccC
Q 021430 175 GLSMEDLAALSGGHTLGFAHCSSFQSRINTNNADPTINPSFAESLRNICPIHNQAKNAGANMDASSATFDNTYYKLILQG 254 (312)
Q Consensus 175 Gl~~~elVaLsGaHtiG~~hc~~f~~Rl~~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDn~Yy~~l~~~ 254 (312)
|||++|||||+||||||++|| .|+. . . +. .+ .||.+|||+||++|+.+
T Consensus 150 Gl~~~d~VaLsGaHTiG~~hc----~r~~--~-~------------------g~------~~-~tp~~fDn~Yy~~ll~~ 197 (250)
T PLN02364 150 GLSDKDIVALSGAHTLGRCHK----DRSG--F-E------------------GA------WT-SNPLIFDNSYFKELLSG 197 (250)
T ss_pred CCCHHHheeeecceeeccccC----CCCC--C-C------------------CC------CC-CCCCccchHHHHHHhcC
Confidence 999999999999999999999 3431 0 0 11 12 68999999999999999
Q ss_pred --cccch--hhhhhcCCcchHHHHHHhhcChHHHHHHHHHHHHHhhCCC
Q 021430 255 --KSLFA--SDQALLSHPETKNLVSKFASSHQSFNEAFVKSMIKMSSIN 299 (312)
Q Consensus 255 --~glL~--SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lg 299 (312)
+|+|. ||++|+.|++|+.+|++||.|++.|+++|++||+||++||
T Consensus 198 ~~~gll~l~sD~~L~~d~~T~~~v~~~a~~~~~F~~~Fa~Am~Km~~lg 246 (250)
T PLN02364 198 EKEGLLQLVSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHMKLSELG 246 (250)
T ss_pred CcCCCccccchHHHccCchHHHHHHHHhhCHHHHHHHHHHHHHHHHccC
Confidence 89865 9999999999999999999999999999999999999998
No 7
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases. Ligninases and related extracellular fungal peroxidases belong to class II of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class II peroxidases are fungal glycoproteins that have been implicated in the oxidative breakdown of lignin, the main cell wall component of woody plants. They contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=3.5e-64 Score=478.13 Aligned_cols=235 Identities=24% Similarity=0.365 Sum_probs=212.0
Q ss_pred HHHHHHHHHHHHHHcCCC---chhhhhHhhhccccC------------CCCCceEeccCCCCCCCCcCCCCCCCCchHHH
Q 021430 35 AEWIIAAAVKAAAAKDKT---VPAALLRMHFHDCFI------------RGCDASVLLNSKGSNKAEKDGPPNVSLHAFYV 99 (312)
Q Consensus 35 ~e~iVr~~v~~~~~~~~~---~aa~llRL~FHDcfv------------~GcDgSill~~~~~~~~E~~~~~N~~L~g~~~ 99 (312)
+|..|++.|++.+..+.. .++.+|||+||||++ +||||||||+++ .|+++++|.||+ ++
T Consensus 16 ~~~~v~~dl~~~~~~~~~c~~~a~~~lRL~FHD~~~~~~~~~~~~~~~gGcDgSill~~~----~E~~~~~N~gL~--~v 89 (328)
T cd00692 16 VWFDILDDIQGNLFNGGECGEEAHESLRLTFHDAIGFSPALAAGQFGGGGADGSIVLFDD----IETAFHANIGLD--EI 89 (328)
T ss_pred chHHHHHHHHHHHhcCCCCchHHHHhHHHhhhcccccccccccCCCCCCCcCceeecCCc----ccccCCCCCCHH--HH
Confidence 588999999999986544 577799999999996 899999999853 699999999998 99
Q ss_pred HHHHHHHHHhhCCCCccHHHHHHHhhHhHHhh-cCCCccccCCCCcCCCCCCccccCCCCCCCCChHHHHHHHHhcCCCh
Q 021430 100 IDNAKKQVETLCPGVVSCADILALAARDAVVL-SGGPTWDVPKGRKDGRTSKASETVQLPAPTFNISQLQQSFSQRGLSM 178 (312)
Q Consensus 100 I~~iK~~le~~cp~~VScADilalAar~av~~-~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~ 178 (312)
|+.||..+|+.| |||||||+||||+||+. .|||.|+|++||+|++++.+. ++||.|+.++++|++.|++|||++
T Consensus 90 vd~lk~~~e~~c---VScADiialAa~~AV~~~~GGP~i~v~~GR~D~~~s~~~--g~LP~p~~sv~~l~~~F~~~Gf~~ 164 (328)
T cd00692 90 VEALRPFHQKHN---VSMADFIQFAGAVAVSNCPGAPRLEFYAGRKDATQPAPD--GLVPEPFDSVDKILARFADAGFSP 164 (328)
T ss_pred HHHHHHHHHhcC---cCHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCCCCcc--cCCCCCCCCHHHHHHHHHHcCCCH
Confidence 999999999998 99999999999999995 599999999999999998765 789999999999999999999999
Q ss_pred hhHHhhccCcccccccccCCcccccCCCCCCCCCHHHHHHHhhhCCCCCCCCCCCCCCCCCCcccchHHHHhhc-cCcc-
Q 021430 179 EDLAALSGGHTLGFAHCSSFQSRINTNNADPTINPSFAESLRNICPIHNQAKNAGANMDASSATFDNTYYKLIL-QGKS- 256 (312)
Q Consensus 179 ~elVaLsGaHtiG~~hc~~f~~Rl~~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDn~Yy~~l~-~~~g- 256 (312)
+|||+|+||||||++|. .||+++ .+++| .||.+|||+||++++ .+++
T Consensus 165 ~E~VaLsGAHTiG~a~~-----------~Dps~~-------------------g~p~D-~TP~~FDn~Yf~~ll~~~~~~ 213 (328)
T cd00692 165 DELVALLAAHSVAAQDF-----------VDPSIA-------------------GTPFD-STPGVFDTQFFIETLLKGTAF 213 (328)
T ss_pred HHHhhhcccccccccCC-----------CCCCCC-------------------CCCCC-CCcchhcHHHHHHHHHcCCCC
Confidence 99999999999999982 377774 14678 699999999999987 5555
Q ss_pred ------------------cchhhhhhcCCcchHHHHHHhhcChHHHHHHHHHHHHHhhCCC-CCccccccCccCC
Q 021430 257 ------------------LFASDQALLSHPETKNLVSKFASSHQSFNEAFVKSMIKMSSIN-GGQEVRKDCRVVN 312 (312)
Q Consensus 257 ------------------lL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lg-tg~eiR~~C~~~n 312 (312)
+|+||++|+.|++|+.+|++||.|++.|+++|++||+||++|| .. ..+.+|+.|+
T Consensus 214 ~g~~~~~~e~~~~~~g~~~L~SD~~L~~D~~T~~~v~~fa~dq~~f~~~Fa~Am~KLs~lgv~~-~~l~dcs~v~ 287 (328)
T cd00692 214 PGSGGNQGEVESPLPGEFRLQSDFLLARDPRTACEWQSFVNNQAKMNAAFAAAMLKLSLLGQDN-ISLTDCSDVI 287 (328)
T ss_pred CCccccccccccCccccccccchHHHhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCCCc-chhccCcccC
Confidence 4999999999999999999999999999999999999999999 54 3677999875
No 8
>PLN02879 L-ascorbate peroxidase
Probab=100.00 E-value=3.3e-63 Score=456.80 Aligned_cols=217 Identities=30% Similarity=0.441 Sum_probs=195.7
Q ss_pred HHHHHHHHHHHHcCCCchhhhhHhhhccccC-------CCCCceEeccCCCCCCCCcCCCCCCCCc-hHHHHHHHHHHHH
Q 021430 37 WIIAAAVKAAAAKDKTVPAALLRMHFHDCFI-------RGCDASVLLNSKGSNKAEKDGPPNVSLH-AFYVIDNAKKQVE 108 (312)
Q Consensus 37 ~iVr~~v~~~~~~~~~~aa~llRL~FHDcfv-------~GcDgSill~~~~~~~~E~~~~~N~~L~-g~~~I~~iK~~le 108 (312)
+-++..+.+.+ .+...+|.+|||+||||.+ +||||||++. .|+++++|.||+ ++++|++||+++
T Consensus 18 ~~~~~~~~~~~-~~~~~~p~~vRla~Hdagt~~~~~~~GG~~Gsirf~------~E~~~~~N~gL~~~~~~i~~iK~~~- 89 (251)
T PLN02879 18 QRCKRKLRGLI-AEKHCAPIVLRLAWHSAGTFDVKTKTGGPFGTIRHP------QELAHDANNGLDIAVRLLDPIKELF- 89 (251)
T ss_pred HHHHHHHHHHH-hCCCchhHhHHHHHhhhccccCCCCCCCCCeeecCh------hhccCCCcCChHHHHHHHHHHHHHc-
Confidence 34566777765 5679999999999999974 8999999863 599999999996 999999999998
Q ss_pred hhCCCCccHHHHHHHhhHhHHhhcCCCccccCCCCcCCCCCCccccCCCCCCCCChHHHHHHHHhcCCChhhHHhhccCc
Q 021430 109 TLCPGVVSCADILALAARDAVVLSGGPTWDVPKGRKDGRTSKASETVQLPAPTFNISQLQQSFSQRGLSMEDLAALSGGH 188 (312)
Q Consensus 109 ~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~elVaLsGaH 188 (312)
++|||||||+||||+||+.+|||.|+|++||+|+.++.+. ++||+|+.++++|++.|++|||+++|||||+|||
T Consensus 90 ----~~VScADilalAa~~AV~~~GGP~~~~~~GR~D~~~~~~~--~~lP~p~~~~~~l~~~F~~~Gl~~~dlVALsGaH 163 (251)
T PLN02879 90 ----PILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPPPE--GRLPQATKGVDHLRDVFGRMGLNDKDIVALSGGH 163 (251)
T ss_pred ----CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCCCCcc--cCCCCCCCCHHHHHHHHHHcCCCHHHHeeeeccc
Confidence 6899999999999999999999999999999999998654 7899999999999999999999999999999999
Q ss_pred ccccccccCCcccccCCCCCCCCCHHHHHHHhhhCCCCCCCCCCCCCCCCCCcccchHHHHhhccC--ccc--chhhhhh
Q 021430 189 TLGFAHCSSFQSRINTNNADPTINPSFAESLRNICPIHNQAKNAGANMDASSATFDNTYYKLILQG--KSL--FASDQAL 264 (312)
Q Consensus 189 tiG~~hc~~f~~Rl~~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDn~Yy~~l~~~--~gl--L~SD~~L 264 (312)
|||++||. |. + ..+ .+| .||.+|||+||++|+.+ +|+ |+||++|
T Consensus 164 TiG~ah~~----r~--g----------------------~~g---~~d-~tp~~FDN~Yy~~ll~~~~~gll~L~SD~aL 211 (251)
T PLN02879 164 TLGRCHKE----RS--G----------------------FEG---AWT-PNPLIFDNSYFKEILSGEKEGLLQLPTDKAL 211 (251)
T ss_pred cccccccc----cc--c----------------------CCC---CCC-CCccceeHHHHHHHHcCCcCCCccchhhHHH
Confidence 99999995 32 1 000 123 68999999999999999 887 6899999
Q ss_pred cCCcchHHHHHHhhcChHHHHHHHHHHHHHhhCCC
Q 021430 265 LSHPETKNLVSKFASSHQSFNEAFVKSMIKMSSIN 299 (312)
Q Consensus 265 ~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lg 299 (312)
+.|++|+++|++||.|++.|+++|++||+||++||
T Consensus 212 ~~D~~t~~~V~~~A~d~~~F~~~Fa~Am~KL~~lg 246 (251)
T PLN02879 212 LDDPLFLPFVEKYAADEDAFFEDYTEAHLKLSELG 246 (251)
T ss_pred hcCCcHHHHHHHHhhCHHHHHHHHHHHHHHHHccC
Confidence 99999999999999999999999999999999998
No 9
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised
Probab=100.00 E-value=9.9e-60 Score=436.28 Aligned_cols=222 Identities=35% Similarity=0.490 Sum_probs=205.0
Q ss_pred HHHHHHHHHHHcCCCchhhhhHhhhccccCC--------CCCceEeccCCCCCCCCcCCCCCCCC-chHHHHHHHHHHHH
Q 021430 38 IIAAAVKAAAAKDKTVPAALLRMHFHDCFIR--------GCDASVLLNSKGSNKAEKDGPPNVSL-HAFYVIDNAKKQVE 108 (312)
Q Consensus 38 iVr~~v~~~~~~~~~~aa~llRL~FHDcfv~--------GcDgSill~~~~~~~~E~~~~~N~~L-~g~~~I~~iK~~le 108 (312)
.|++.|++.+.+++.+++++|||+||||++. ||||||+++ +|+++++|.+| +++++|++||.++|
T Consensus 2 ~v~~~l~~~~~~~~~~~~~llRl~fHD~~~~~~~~~~~gg~dgsi~~~------~e~~~~~N~~l~~~~~~l~~ik~~~~ 75 (255)
T cd00314 2 AIKAILEDLITQAGALAGSLLRLAFHDAGTYDIADGKGGGADGSIRFE------PELDRPENGGLDKALRALEPIKSAYD 75 (255)
T ss_pred hHHHHHHHHHHhCcchHHHHHHHHHHHhccccccCCCCCCCCceEecc------ccccCcccccHHHHHHHHHHHHHHcC
Confidence 5889999999999999999999999999996 999999997 39999999997 99999999999999
Q ss_pred hhCCCCccHHHHHHHhhHhHHhhc--CCCccccCCCCcCCCCCC--cccc-CCCCCCCCChHHHHHHHHhcCCChhhHHh
Q 021430 109 TLCPGVVSCADILALAARDAVVLS--GGPTWDVPKGRKDGRTSK--ASET-VQLPAPTFNISQLQQSFSQRGLSMEDLAA 183 (312)
Q Consensus 109 ~~cp~~VScADilalAar~av~~~--GGP~~~v~~GR~D~~~s~--~~~~-~~lP~p~~~~~~l~~~F~~~Gl~~~elVa 183 (312)
. |++|||||||++|+++||+.+ |||.|+|++||+|+..+. ...+ ..+|.|..+++++++.|+++||+++||||
T Consensus 76 ~--~~~vS~ADlialAa~~Av~~~~~ggp~~~~~~GR~D~~~~~~~~p~P~~~~p~~~~~~~~~~~~F~~~Gl~~~e~VA 153 (255)
T cd00314 76 G--GNPVSRADLIALAGAVAVESTFGGGPLIPFRFGRLDATEPDLGVPDPEGLLPNETSSATELRDKFKRMGLSPSELVA 153 (255)
T ss_pred C--CCcccHHHHHHHHHHHHHHHhccCCCeeeeCCCCCCCchhhccCCCCCCCCCCccchHHHHHHHHHHcCCCHHHHHh
Confidence 8 899999999999999999999 999999999999999663 2233 67899999999999999999999999999
Q ss_pred hc-cCccc-ccccccCCcccccCCCCCCCCCHHHHHHHhhhCCCCCCCCCCCCCCCCCCcccchHHHHhhccCc------
Q 021430 184 LS-GGHTL-GFAHCSSFQSRINTNNADPTINPSFAESLRNICPIHNQAKNAGANMDASSATFDNTYYKLILQGK------ 255 (312)
Q Consensus 184 Ls-GaHti-G~~hc~~f~~Rl~~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDn~Yy~~l~~~~------ 255 (312)
|+ ||||| |++||..+..|+ | .+|+.||.+|||+||++++.++
T Consensus 154 L~~GaHti~G~~~~~~~~~~~--------------------~----------~~~~~tp~~fDN~yy~~l~~~~~~~~~~ 203 (255)
T cd00314 154 LSAGAHTLGGKNHGDLLNYEG--------------------S----------GLWTSTPFTFDNAYFKNLLDMNWEWRVG 203 (255)
T ss_pred hccCCeeccCcccCCCCCccc--------------------C----------CCCCCCCCccchHHHHHHhcCCcccccC
Confidence 99 99999 999999876553 2 1344799999999999999998
Q ss_pred ----------ccchhhhhhcCCcchHHHHHHhhcChHHHHHHHHHHHHHhhC
Q 021430 256 ----------SLFASDQALLSHPETKNLVSKFASSHQSFNEAFVKSMIKMSS 297 (312)
Q Consensus 256 ----------glL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~ 297 (312)
++|+||++|+.|++|+.+|++||.|++.|+++|++||+||++
T Consensus 204 ~~~~~~~~~~~~l~sD~~L~~d~~t~~~v~~ya~~~~~f~~~Fa~a~~Km~~ 255 (255)
T cd00314 204 SPDPDGVKGPGLLPSDYALLSDSETRALVERYASDQEKFFEDFAKAWIKMVN 255 (255)
T ss_pred CccCCCcccCCCchhhHHHhcCHhHHHHHHHHHhCHHHHHHHHHHHHHHHcC
Confidence 899999999999999999999999999999999999999985
No 10
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms, where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to class I of the plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C
Probab=100.00 E-value=1.5e-56 Score=432.56 Aligned_cols=265 Identities=21% Similarity=0.329 Sum_probs=230.6
Q ss_pred cCCccc-cccCCCCHH-HHHHHHHHHHHHcC--------CCchhhhhHhhhccccC-------CCCC-ceEeccCCCCCC
Q 021430 22 ALSLNY-YEKTCPDAE-WIIAAAVKAAAAKD--------KTVPAALLRMHFHDCFI-------RGCD-ASVLLNSKGSNK 83 (312)
Q Consensus 22 ~l~~~f-Y~~sCP~~e-~iVr~~v~~~~~~~--------~~~aa~llRL~FHDcfv-------~GcD-gSill~~~~~~~ 83 (312)
.+-.+| |.+.+-... +.|++.|++.+... ...+|.+|||+||++.+ +|++ |+|.+.
T Consensus 28 p~~~~~~~~~~~~~~d~~~~~~di~~ll~~s~~~wp~D~g~~gp~lvRlAWh~AgTy~~~d~~GG~ngg~iRf~------ 101 (409)
T cd00649 28 PMGEDFNYAEEFKKLDLEALKEDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIADGRGGAGTGQQRFA------ 101 (409)
T ss_pred CCCCCCCHHHHhhhccHHHHHHHHHHHHhcccccCccccCCcccceeeeeccccccccCcCCCCCCCCCccccc------
Confidence 355555 555554443 78899999988764 47999999999999986 7997 889875
Q ss_pred CCcCCCCCCCC-chHHHHHHHHHHHHhhCCCCccHHHHHHHhhHhHHhhcCCCccccCCCCcCCCCCCc-----------
Q 021430 84 AEKDGPPNVSL-HAFYVIDNAKKQVETLCPGVVSCADILALAARDAVVLSGGPTWDVPKGRKDGRTSKA----------- 151 (312)
Q Consensus 84 ~E~~~~~N~~L-~g~~~I~~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~----------- 151 (312)
+|++++.|.+| +++.++++||+++ |..||+||+|+||+..|||.+|||.|++.+||.|...+..
T Consensus 102 pe~~~~~N~gL~~a~~~L~pik~k~----~~~iS~ADL~~LaG~~AiE~~Ggp~ipf~~GR~Da~~~~~~v~wg~~~~~~ 177 (409)
T cd00649 102 PLNSWPDNVNLDKARRLLWPIKQKY----GNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGPEKEWL 177 (409)
T ss_pred cccCcHhhhhHHHHHHHHHHHHHHc----CCCccHHHHHHHHHHHHHHHcCCCcccccCCCCccCCCccccccCcchhcc
Confidence 69999999999 7899999999998 4579999999999999999999999999999999975432
Q ss_pred ---------------------------cccCCCCCCCCChHHHHHHHHhcCCChhhHHhh-ccCcccccccccCCccccc
Q 021430 152 ---------------------------SETVQLPAPTFNISQLQQSFSQRGLSMEDLAAL-SGGHTLGFAHCSSFQSRIN 203 (312)
Q Consensus 152 ---------------------------~~~~~lP~p~~~~~~l~~~F~~~Gl~~~elVaL-sGaHtiG~~hc~~f~~Rl~ 203 (312)
+.+..||+|..++.+|++.|++||||++||||| +||||||++||..|.+||+
T Consensus 178 ~~~~~~~~~~l~~pl~a~~mgliyv~Pegp~gLPdP~~sa~~LR~~F~RmGlnd~E~VAL~sGAHTiGkaHc~~~~~rlg 257 (409)
T cd00649 178 ADKRYSGDRDLENPLAAVQMGLIYVNPEGPDGNPDPLAAAKDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASHVG 257 (409)
T ss_pred cccccccchhhccchhhhhccccccCCCCCCCCCCCccCHHHHHHHHHHcCCCHHHHeeeccCCcceeecCcccccccCC
Confidence 111379999999999999999999999999999 5999999999999999984
Q ss_pred CCCCCCCCCHHHHHHHh--hhCCCCC-CCCCCCCCC---CCCCcccchHHHHhhcc------------------------
Q 021430 204 TNNADPTINPSFAESLR--NICPIHN-QAKNAGANM---DASSATFDNTYYKLILQ------------------------ 253 (312)
Q Consensus 204 ~~~~dp~~~~~~~~~L~--~~Cp~~~-~~~~~~~lD---~~tp~~FDn~Yy~~l~~------------------------ 253 (312)
+||++++.|++.|+ +.||.+. .++....+| +.||.+|||+||++|+.
T Consensus 258 ---~dP~~~~~~~~gLgw~~~Cp~g~g~~t~~sglDG~Wt~tP~~FDN~YF~nLl~~eW~~~~~p~g~~Q~~~~~~~~~~ 334 (409)
T cd00649 258 ---PEPEAAPIEQQGLGWKNSYGTGKGKDTITSGLEGAWTPTPTKWDNNYLKNLFGYEWELTKSPAGAWQWVPKNAAGEN 334 (409)
T ss_pred ---CCCCcCHHHHHhhcccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHHhccceeccCCCCcccccccCccccc
Confidence 79999999999996 8999643 233345788 47999999999999998
Q ss_pred ------------CcccchhhhhhcCCcchHHHHHHhhcChHHHHHHHHHHHHHh--hCCC
Q 021430 254 ------------GKSLFASDQALLSHPETKNLVSKFASSHQSFNEAFVKSMIKM--SSIN 299 (312)
Q Consensus 254 ------------~~glL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km--~~lg 299 (312)
+++||+||++|+.|++++++|++||.|++.|+++|++||+|| +.+|
T Consensus 335 ~~~d~~~~~~~~~~gmL~SD~aL~~Dp~tr~iV~~yA~d~~~Ff~dFA~A~~KL~hrdmg 394 (409)
T cd00649 335 TVPDAHDPSKKHAPMMLTTDLALRFDPEYEKISRRFLENPDEFADAFAKAWFKLTHRDMG 394 (409)
T ss_pred cCCCccccccccCcccchhhHhhhcCccHHHHHHHHhcCHHHHHHHHHHHHHHHccccCC
Confidence 568999999999999999999999999999999999999999 4666
No 11
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=1.6e-53 Score=434.79 Aligned_cols=265 Identities=21% Similarity=0.299 Sum_probs=228.6
Q ss_pred cCCccc-cccCCCCH-HHHHHHHHHHHHHcC--------CCchhhhhHhhhccccC-------CCC-CceEeccCCCCCC
Q 021430 22 ALSLNY-YEKTCPDA-EWIIAAAVKAAAAKD--------KTVPAALLRMHFHDCFI-------RGC-DASVLLNSKGSNK 83 (312)
Q Consensus 22 ~l~~~f-Y~~sCP~~-e~iVr~~v~~~~~~~--------~~~aa~llRL~FHDcfv-------~Gc-DgSill~~~~~~~ 83 (312)
.|..+| |.+.+-.. -+.|++.|++.+... ...+|.+|||+||++.+ ||| .|+|.+.
T Consensus 38 p~~~~f~y~~~~~~ld~~a~~~dl~~l~~~s~~wwpad~g~ygp~~vRlAWHsAgTYr~~d~rGGa~gg~iRf~------ 111 (716)
T TIGR00198 38 PMGEDFDYAEEFQQLDLAAVKQDLKHLMTDSQSWWPADWGHYGGLFIRMAWHAAGTYRIADGRGGAATGNQRFA------ 111 (716)
T ss_pred CCCCCccHHHHhhhccHHHHHHHHHHHHhcCcccCccccCCcceeeeeeeccccccccCCCCCCCCCCCceecc------
Confidence 455555 66555443 257899999988764 47999999999999986 788 5888875
Q ss_pred CCcCCCCCCCC-chHHHHHHHHHHHHhhCCCCccHHHHHHHhhHhHHhhcCCCccccCCCCcCCCCCC------------
Q 021430 84 AEKDGPPNVSL-HAFYVIDNAKKQVETLCPGVVSCADILALAARDAVVLSGGPTWDVPKGRKDGRTSK------------ 150 (312)
Q Consensus 84 ~E~~~~~N~~L-~g~~~I~~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~------------ 150 (312)
+|++++.|.+| +++.++++||++ ||++|||||||+||+++||+.+|||.|+|.+||+|+..+.
T Consensus 112 P~~sw~~N~~Ldka~~lL~pIk~k----yp~~VS~ADLivLAG~vAVE~~Ggp~i~f~~GR~D~~~~~~d~~~g~e~~~l 187 (716)
T TIGR00198 112 PLNSWPDNVNLDKARRLLWPIKKK----YGNKLSWADLIILAGTVAYESMGLKVFGFAGGREDIWEPDKDIYWGAEKEWL 187 (716)
T ss_pred cccCchhhhhHHHHHHHHHHHHHH----CCCceeHHHHHHHHHHHHHHHhCCCccCCCCCCCCCCCcccccccccccchh
Confidence 69999999999 789999999875 6899999999999999999999999999999999994321
Q ss_pred -------------------------ccccCCCCCCCCChHHHHHHHHhcCCChhhHHhhc-cCcccccccccCCcccccC
Q 021430 151 -------------------------ASETVQLPAPTFNISQLQQSFSQRGLSMEDLAALS-GGHTLGFAHCSSFQSRINT 204 (312)
Q Consensus 151 -------------------------~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~elVaLs-GaHtiG~~hc~~f~~Rl~~ 204 (312)
+..+..+|+|..++.+|++.|++||||++|||||+ ||||||++||.+|.+|+
T Consensus 188 ~~~~~~~~~l~~p~a~~~~Gliyvnpeg~~~lPdP~~sa~~Lrd~F~rmGLnd~EmVALiaGaHTiGkaHc~s~~~rl-- 265 (716)
T TIGR00198 188 TSSREDRESLENPLAATEMGLIYVNPEGPDGHPDPLCTAQDIRTTFARMGMNDEETVALIAGGHTVGKCHGAGPAELI-- 265 (716)
T ss_pred hccccccccccccchhhhccccccCcccccCCCCCCCCHHHHHHHHHHcCCChHHHeeeecCceeccccCCCcccccC--
Confidence 11113699999999999999999999999999995 99999999999999998
Q ss_pred CCCCCCCCHHHHHHHhhhCCCC---CCCCCCCCCC---CCCCcccchHHHHhhccC------------------------
Q 021430 205 NNADPTINPSFAESLRNICPIH---NQAKNAGANM---DASSATFDNTYYKLILQG------------------------ 254 (312)
Q Consensus 205 ~~~dp~~~~~~~~~L~~~Cp~~---~~~~~~~~lD---~~tp~~FDn~Yy~~l~~~------------------------ 254 (312)
+ +||++++.|++.|+..||.+ +.++....+| ..||.+|||+||++|+.+
T Consensus 266 g-~dP~~~~~~~~gLg~~c~~~~g~g~dt~~sglDG~wT~TP~~FDN~YF~nLl~~~w~~~~s~~g~~q~~~~~~~~~~p 344 (716)
T TIGR00198 266 G-PDPEGAPIEEQGLGWHNQYGKGVGRDTMTSGLEVAWTTTPTQWDNGYFYMLFNYEWELKKSPAGAWQWEAVDAPEIIP 344 (716)
T ss_pred C-CCCCcCHHHHHHhcccCCCCCCCCCCcccccCCCCCCCCCCccchHHHHHHhcCCceeeecCCCCceeeecccccccc
Confidence 3 89999999999999999852 2233346777 579999999999999975
Q ss_pred ----------cccchhhhhhcCCcchHHHHHHhhcChHHHHHHHHHHHHHhhCCC
Q 021430 255 ----------KSLFASDQALLSHPETKNLVSKFASSHQSFNEAFVKSMIKMSSIN 299 (312)
Q Consensus 255 ----------~glL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lg 299 (312)
.++|+||++|..|++++++|++||.|++.|+++|++||.||++..
T Consensus 345 ~~~~~~~~~~~~mL~SDlaL~~Dp~~r~iVe~yA~d~~~F~~dFA~Aw~KL~~~d 399 (716)
T TIGR00198 345 DVEDPNKKHNPIMLDADLALRFDPEFRKISRRFLREPDYFAEAFAKAWFKLTHRD 399 (716)
T ss_pred cccccccccccCccchhHHhccCccHHHHHHHHhcCHHHHHHHHHHHHHHHcccc
Confidence 689999999999999999999999999999999999999999544
No 12
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=1.4e-50 Score=411.15 Aligned_cols=263 Identities=21% Similarity=0.322 Sum_probs=227.5
Q ss_pred cCCccc-cccCCCCHH-HHHHHHHHHHHHcC--------CCchhhhhHhhhccccC-------CCCC-ceEeccCCCCCC
Q 021430 22 ALSLNY-YEKTCPDAE-WIIAAAVKAAAAKD--------KTVPAALLRMHFHDCFI-------RGCD-ASVLLNSKGSNK 83 (312)
Q Consensus 22 ~l~~~f-Y~~sCP~~e-~iVr~~v~~~~~~~--------~~~aa~llRL~FHDcfv-------~GcD-gSill~~~~~~~ 83 (312)
.|-.+| |.+-+-... +.|++.|++.+... ...+|.+|||+||++.+ +||+ |+|.+.
T Consensus 40 p~~~~f~y~~~~~~ld~~a~k~di~~l~~~sqdwwpaD~g~ygp~~vRlAWH~AgTYr~~d~rGGangg~iRf~------ 113 (726)
T PRK15061 40 PMGEDFDYAEEFKKLDLEALKKDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRFA------ 113 (726)
T ss_pred CCCCCCCHHHHhchhhHHHHHHHHHHHHhcccccccccCCCccceeeeeeecccccccCcCCCCCCCCCcccCc------
Confidence 455566 666554442 57899999988764 47999999999999986 7886 788875
Q ss_pred CCcCCCCCCCC-chHHHHHHHHHHHHhhCCCCccHHHHHHHhhHhHHhhcCCCccccCCCCcCCCCCCc-----------
Q 021430 84 AEKDGPPNVSL-HAFYVIDNAKKQVETLCPGVVSCADILALAARDAVVLSGGPTWDVPKGRKDGRTSKA----------- 151 (312)
Q Consensus 84 ~E~~~~~N~~L-~g~~~I~~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~----------- 151 (312)
+|++++.|.+| +++.++++||+++ |..||+||+|+||+..|||.+|||.|++.+||.|...+..
T Consensus 114 pe~~w~~N~gL~ka~~~L~pik~ky----~~~iS~ADLi~LaG~vAiE~~Ggp~i~f~~GR~D~~~~~~~v~wg~e~~~l 189 (726)
T PRK15061 114 PLNSWPDNVNLDKARRLLWPIKQKY----GNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPEEDVYWGPEKEWL 189 (726)
T ss_pred ccccchhhhhHHHHHHHHHHHHHHh----CCCccHHHHHHHHHHHHHHHcCCCccCcCCCCCCCcCCccccccCcccccc
Confidence 69999999999 7899999999998 4689999999999999999999999999999999864332
Q ss_pred ----------------------------cccCCCCCCCCChHHHHHHHHhcCCChhhHHhhc-cCcccccccccCCcccc
Q 021430 152 ----------------------------SETVQLPAPTFNISQLQQSFSQRGLSMEDLAALS-GGHTLGFAHCSSFQSRI 202 (312)
Q Consensus 152 ----------------------------~~~~~lP~p~~~~~~l~~~F~~~Gl~~~elVaLs-GaHtiG~~hc~~f~~Rl 202 (312)
+.+..+|+|..++.+|++.|++||||++|||||+ ||||||++||..|.+|+
T Consensus 190 ~~~~r~~~~~~l~~pl~a~~mgliyvnpegp~glPdP~~sa~~lR~tF~RMGmnDeEtVALiaGgHT~GkaHca~~~~rl 269 (726)
T PRK15061 190 GGDERYSGERDLENPLAAVQMGLIYVNPEGPNGNPDPLAAARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGDASHV 269 (726)
T ss_pred ccccccccccccccchhhhhccceecCCCCCCCCCCcccCHHHHHHHHHHcCCCHHHheeeccCCceeeeCCCcCccccc
Confidence 1112379999999999999999999999999995 99999999999999998
Q ss_pred cCCCCCCCCCHHHHHHHh--hhCCCC-CCCCCCCCCC---CCCCcccchHHHHhhccC----------------------
Q 021430 203 NTNNADPTINPSFAESLR--NICPIH-NQAKNAGANM---DASSATFDNTYYKLILQG---------------------- 254 (312)
Q Consensus 203 ~~~~~dp~~~~~~~~~L~--~~Cp~~-~~~~~~~~lD---~~tp~~FDn~Yy~~l~~~---------------------- 254 (312)
++||.+++.+.+.|. +.||.+ +.++....+| ..||.+|||+||++|+.+
T Consensus 270 ---gpdP~~a~~~~qgLgw~~~c~~g~g~dt~tsGldG~Wt~tPt~fDN~YF~nLl~~~W~~~~sp~G~~qw~~~~~~~~ 346 (726)
T PRK15061 270 ---GPEPEAAPIEEQGLGWKNSYGSGKGADTITSGLEGAWTTTPTQWDNGYFENLFGYEWELTKSPAGAWQWVPKDGAAE 346 (726)
T ss_pred ---CCCCCcCHHHHHhccccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHhhCcceeccCCCccccccccCcccc
Confidence 379999999999985 899964 2333345688 579999999999999984
Q ss_pred --------------cccchhhhhhcCCcchHHHHHHhhcChHHHHHHHHHHHHHhhC
Q 021430 255 --------------KSLFASDQALLSHPETKNLVSKFASSHQSFNEAFVKSMIKMSS 297 (312)
Q Consensus 255 --------------~glL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~ 297 (312)
.+||+||++|..||+++++|++||.|++.|+++|++||.||+.
T Consensus 347 ~~~pd~~~~~~~~~~~MLtSD~AL~~DP~~r~iV~~fA~d~~~F~~~FA~A~~KL~h 403 (726)
T PRK15061 347 DTVPDAHDPSKKHAPTMLTTDLALRFDPEYEKISRRFLENPEEFADAFARAWFKLTH 403 (726)
T ss_pred ccCCcccccccccCcccccccHHhhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHcc
Confidence 5899999999999999999999999999999999999999955
No 13
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins. This is a subgroup of heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX) which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions.
Probab=100.00 E-value=2.3e-51 Score=378.16 Aligned_cols=219 Identities=25% Similarity=0.376 Sum_probs=182.4
Q ss_pred HHHHHHHHHHcCCCchhhhhHhhhcccc-------CCCCCceEeccCCCCCCCCcC-CCCCCCCchHHHHHHHHHHHHhh
Q 021430 39 IAAAVKAAAAKDKTVPAALLRMHFHDCF-------IRGCDASVLLNSKGSNKAEKD-GPPNVSLHAFYVIDNAKKQVETL 110 (312)
Q Consensus 39 Vr~~v~~~~~~~~~~aa~llRL~FHDcf-------v~GcDgSill~~~~~~~~E~~-~~~N~~L~g~~~I~~iK~~le~~ 110 (312)
|...-..+...+++++++||||+||||| ++||||||+++.. .+|+. .+.|.+|++|+.|+.+
T Consensus 27 v~~c~~~~~~~~~~~aa~~LRL~FHDc~t~~~~~g~gGcDgSIlle~~---~~En~G~~~n~~l~~~~~i~~~------- 96 (264)
T cd08201 27 VTPCTDCAPGPGRQAAAEWLRTAFHDMATHNVDDGTGGLDASIQYELD---RPENIGSGFNTTLNFFVNFYSP------- 96 (264)
T ss_pred cccccccCcCCCccHHHHHHHHHHHhhcCcccCCCCCCCCcceeecCC---ChhhccCchhhccccceeeccC-------
Confidence 3444444556889999999999999999 8999999999742 46887 5667788888887543
Q ss_pred CCCCccHHHHHHHhhHhHHhhcCCCccccCCCCcCCCCCCccccCCCCCCCCChHHHHHHHHhcCCChhhHHhhcc-Ccc
Q 021430 111 CPGVVSCADILALAARDAVVLSGGPTWDVPKGRKDGRTSKASETVQLPAPTFNISQLQQSFSQRGLSMEDLAALSG-GHT 189 (312)
Q Consensus 111 cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~elVaLsG-aHt 189 (312)
+||||||||||||+||+.+|||.|+|++||+|++++.+. .||.|+.++++|++.|++|||+++|||+|+| |||
T Consensus 97 ---~VScADiialAa~~AV~~~GGP~i~v~~GR~Da~~s~~~---glP~P~~~v~~l~~~Fa~~Gfs~~DmVaLsggaHT 170 (264)
T cd08201 97 ---RSSMADLIAMGVVTSVASCGGPVVPFRAGRIDATEAGQA---GVPEPQTDLGTTTESFRRQGFSTSEMIALVACGHT 170 (264)
T ss_pred ---ccCHHHHHHHHHHHHHHHcCCCeecccccCCCccccccc---cCCCCccCHHHHHHHHHHcCCChHHHheeecCCee
Confidence 699999999999999999999999999999999988765 4999999999999999999999999999995 999
Q ss_pred cccccccCCcccccCCCCCCCCCHHHHHHHhhhCCCCCCCCCCCCCCCCCCcccchHHHHhhccCcc----------cch
Q 021430 190 LGFAHCSSFQSRINTNNADPTINPSFAESLRNICPIHNQAKNAGANMDASSATFDNTYYKLILQGKS----------LFA 259 (312)
Q Consensus 190 iG~~hc~~f~~Rl~~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDn~Yy~~l~~~~g----------lL~ 259 (312)
||++||..|.++.- |.. ..+...++| .||.+|||+||.+++.+.. .+.
T Consensus 171 iG~ahc~~f~~~~~-----~g~----------------~~~~~~p~d-stp~~FDn~~f~E~l~g~~~~~L~~~~~~~~~ 228 (264)
T cd08201 171 LGGVHSEDFPEIVP-----PGS----------------VPDTVLQFF-DTTIQFDNKVVTEYLSGTTNNPLVVGPNNTTN 228 (264)
T ss_pred eeecccccchhhcC-----Ccc----------------ccCCCCCCC-CCccccchHHHHHHhcCCCCCceeecCCCCcc
Confidence 99999999876641 110 001234677 6999999999999998742 368
Q ss_pred hhhhhcCCcchHHHHHHhhcChHHHHHHHHHHHHHhhC
Q 021430 260 SDQALLSHPETKNLVSKFASSHQSFNEAFVKSMIKMSS 297 (312)
Q Consensus 260 SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~ 297 (312)
||..++..+.-. .++..| +++.|.+.++..++||.+
T Consensus 229 sd~r~f~~d~n~-t~~~l~-~~~~f~~~c~~~~~~mi~ 264 (264)
T cd08201 229 SDLRIFSSDGNV-TMNELA-SPDTFQKTCADILQRMID 264 (264)
T ss_pred chhhheecCccH-HHHHhc-ChHHHHHHHHHHHHHHhC
Confidence 999999865543 567787 789999999999999974
No 14
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=100.00 E-value=3.3e-41 Score=314.33 Aligned_cols=220 Identities=20% Similarity=0.240 Sum_probs=182.5
Q ss_pred HHHHHHHHHcCCCchhhhhHhhhccccC-------CCCCce-EeccCCCCCCCCcCCCCCCC--C-chHHHHHHHHHHHH
Q 021430 40 AAAVKAAAAKDKTVPAALLRMHFHDCFI-------RGCDAS-VLLNSKGSNKAEKDGPPNVS--L-HAFYVIDNAKKQVE 108 (312)
Q Consensus 40 r~~v~~~~~~~~~~aa~llRL~FHDcfv-------~GcDgS-ill~~~~~~~~E~~~~~N~~--L-~g~~~I~~iK~~le 108 (312)
-+.+++.+.......+.||||+||++.+ ||++|+ |.|. +|++++.|.+ | +.+.++++||+++.
T Consensus 16 i~~lk~~i~~~gl~~~~lvrlAWhsAgTyr~sd~rGGaNGariRl~------pe~~w~~N~~~~L~~~~~~Le~ik~~~~ 89 (297)
T cd08200 16 IAALKAKILASGLTVSELVSTAWASASTFRNSDKRGGANGARIRLA------PQKDWEVNEPEELAKVLAVLEGIQKEFN 89 (297)
T ss_pred HHHHHHHHHhcCCcHHHHHHHhhhccccccCCCCCCCCCcccccCc------cccCcCccCcHHHHHHHHHHHHHHHHhc
Confidence 3677888888889999999999999986 899999 7775 6999999998 8 68999999999984
Q ss_pred hh-CC-CCccHHHHHHHhhHhHHhhcCC-----CccccCCCCcCCCCCCcccc---CCCCCCC------------CChHH
Q 021430 109 TL-CP-GVVSCADILALAARDAVVLSGG-----PTWDVPKGRKDGRTSKASET---VQLPAPT------------FNISQ 166 (312)
Q Consensus 109 ~~-cp-~~VScADilalAar~av~~~GG-----P~~~v~~GR~D~~~s~~~~~---~~lP~p~------------~~~~~ 166 (312)
.. -+ ..||+||+|+||+..|||.+|| |.|++.+||.|...+..... ..+|.+. .+.++
T Consensus 90 ~~~~~~~~vS~ADLivLaG~vAiE~agg~ag~~p~Ipf~pGR~Da~~~~td~~sf~~l~P~adg~rny~~~~~~~~~~~~ 169 (297)
T cd08200 90 ESQSGGKKVSLADLIVLGGCAAVEKAAKDAGVDIKVPFTPGRTDATQEQTDVESFEVLEPKADGFRNYLKKGYRVPPEEM 169 (297)
T ss_pred ccccCCccccHHHHHHHHhHHHHHHHHhccCCCceeccCCCCCCcccCCCCcccccccCCCCcccccccccCCCCCHHHH
Confidence 22 11 2799999999999999999999 99999999999987643211 1335332 23478
Q ss_pred HHHHHHhcCCChhhHHhhccCc-ccccccccCCcccccCCCCCCCCCHHHHHHHhhhCCCCCCCCCCCCCCCCCCcccch
Q 021430 167 LQQSFSQRGLSMEDLAALSGGH-TLGFAHCSSFQSRINTNNADPTINPSFAESLRNICPIHNQAKNAGANMDASSATFDN 245 (312)
Q Consensus 167 l~~~F~~~Gl~~~elVaLsGaH-tiG~~hc~~f~~Rl~~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDn 245 (312)
|++.|.++|||++|||||+||| ++|..|..++. |.++ .+|.+|||
T Consensus 170 Lrd~f~rlglsd~EmvaL~Gg~r~lG~~~~~s~~---------------------------G~wT-------~~p~~f~N 215 (297)
T cd08200 170 LVDKAQLLTLTAPEMTVLVGGLRVLGANYGGSKH---------------------------GVFT-------DRPGVLTN 215 (297)
T ss_pred HHHHHHhCCCChHHHhheecchhhcccCCCCCCC---------------------------CCCc-------CCCCcccc
Confidence 9999999999999999999997 69988753211 2222 57999999
Q ss_pred HHHHhhccC--------------------cc-----cchhhhhhcCCcchHHHHHHhhcC--hHHHHHHHHHHHHHhhCC
Q 021430 246 TYYKLILQG--------------------KS-----LFASDQALLSHPETKNLVSKFASS--HQSFNEAFVKSMIKMSSI 298 (312)
Q Consensus 246 ~Yy~~l~~~--------------------~g-----lL~SD~~L~~d~~t~~~V~~yA~d--~~~F~~~Fa~Am~Km~~l 298 (312)
.||++|+.. .| .+++|+.|.+|++.|++|+.||.| ++.|++||++||.||+++
T Consensus 216 ~fF~nLLd~~~~W~~~~~~~~~~~~~dr~~g~~~~~~t~~Dl~l~sd~~~R~~ve~YA~dd~~~~F~~DF~~A~~Klmel 295 (297)
T cd08200 216 DFFVNLLDMSTEWKPADEDDGLFEGRDRKTGEVKWTATRVDLVFGSNSELRAVAEVYASDDAQEKFVKDFVAAWTKVMNL 295 (297)
T ss_pred HHHHHHhcccceeeecCCCCCceeeccCCCCceeeccChhhhhhccCHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhc
Confidence 999999951 01 278999999999999999999998 899999999999999987
Q ss_pred C
Q 021430 299 N 299 (312)
Q Consensus 299 g 299 (312)
.
T Consensus 296 d 296 (297)
T cd08200 296 D 296 (297)
T ss_pred C
Confidence 4
No 15
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=9.5e-36 Score=304.52 Aligned_cols=218 Identities=18% Similarity=0.253 Sum_probs=177.2
Q ss_pred HHHHHHH---HHHcCCCchhhhhHhhhccccC-------CCCCce-EeccCCCCCCCCcCCCCC--CCC-chHHHHHHHH
Q 021430 39 IAAAVKA---AAAKDKTVPAALLRMHFHDCFI-------RGCDAS-VLLNSKGSNKAEKDGPPN--VSL-HAFYVIDNAK 104 (312)
Q Consensus 39 Vr~~v~~---~~~~~~~~aa~llRL~FHDcfv-------~GcDgS-ill~~~~~~~~E~~~~~N--~~L-~g~~~I~~iK 104 (312)
|++.|+. .+.......+.||||+||++.+ ||++|+ |.|. +|++++.| .+| +.+.++|+||
T Consensus 430 v~~di~~lk~~i~~sgl~~~~lVr~AWhsA~Tyr~sd~rGGaNGariRl~------pe~~w~~N~p~gL~~vl~~Le~Ik 503 (716)
T TIGR00198 430 SEGDIKELKQQILASGLSVSELVCTAWASASTFRSSDYRGGANGARIRLE------PQKNWPVNEPTRLAKVLAVLEKIQ 503 (716)
T ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHhhhhcccccCCCCCCCCCcceeecc------hhcCcccCCHHHHHHHHHHHHHHH
Confidence 3444444 4666777899999999999986 899999 8775 69999999 799 7899999999
Q ss_pred HHHHhhCCCCccHHHHHHHhhHhHHhhc---CCC--ccccCCCCcCCCCCCccccCCCC---CC------------CCCh
Q 021430 105 KQVETLCPGVVSCADILALAARDAVVLS---GGP--TWDVPKGRKDGRTSKASETVQLP---AP------------TFNI 164 (312)
Q Consensus 105 ~~le~~cp~~VScADilalAar~av~~~---GGP--~~~v~~GR~D~~~s~~~~~~~lP---~p------------~~~~ 164 (312)
+++.. ..||+||+|+||+..|||.+ ||| .|++.+||.|............| .+ ....
T Consensus 504 ~~f~~---~~vS~ADLivLaG~vAVE~aa~~gG~~~~Vpf~pGR~Da~~~~td~~~~~~l~p~adgfRn~~~~~~~~~~~ 580 (716)
T TIGR00198 504 AEFAK---GPVSLADLIVLGGGAAVEKAALDAGISVNVPFLPGRVDATQAMTDAESFTPLEPIADGFRNYLKRDYAVTPE 580 (716)
T ss_pred HHcCC---CcccHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCccccCCCCccccccCCCCCcccchhccccccCCHH
Confidence 99842 27999999999999999998 898 58999999999876432112222 11 2235
Q ss_pred HHHHHHHHhcCCChhhHHhhccC-cccccccccCCcccccCCCCCCCCCHHHHHHHhhhCCCCCCCCCCCCCCCCCCccc
Q 021430 165 SQLQQSFSQRGLSMEDLAALSGG-HTLGFAHCSSFQSRINTNNADPTINPSFAESLRNICPIHNQAKNAGANMDASSATF 243 (312)
Q Consensus 165 ~~l~~~F~~~Gl~~~elVaLsGa-HtiG~~hc~~f~~Rl~~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~F 243 (312)
..|++.|.++|||++|||||+|| |++|++|..++. |.++ .+|.+|
T Consensus 581 ~~l~d~a~~lglt~~EmvaL~Gg~r~lG~~~~~s~~---------------------------G~~T-------~~p~~f 626 (716)
T TIGR00198 581 ELLLDKAQLLTLTAPEMTVLIGGMRVLGANHGGSKH---------------------------GVFT-------DRVGVL 626 (716)
T ss_pred HHHHHHHHhCCCChHHHHheecchhhccccCCCCCC---------------------------CCCc-------CCCCcc
Confidence 66889999999999999999999 599999854321 2222 579999
Q ss_pred chHHHHhhccCc--------------------c---c--chhhhhhcCCcchHHHHHHhhcCh--HHHHHHHHHHHHHhh
Q 021430 244 DNTYYKLILQGK--------------------S---L--FASDQALLSHPETKNLVSKFASSH--QSFNEAFVKSMIKMS 296 (312)
Q Consensus 244 Dn~Yy~~l~~~~--------------------g---l--L~SD~~L~~d~~t~~~V~~yA~d~--~~F~~~Fa~Am~Km~ 296 (312)
||.||++|+... | + ..+|+.|.+|++.|++|+.||+|+ +.|++||++||.|++
T Consensus 627 ~NdfF~~LLd~~~~w~~~~~~~~~~~~~dr~tg~~~~~~t~~Dl~~~sd~~lra~aE~YA~dd~~~~F~~DF~~Aw~Klm 706 (716)
T TIGR00198 627 SNDFFVNLLDMAYEWRAADNNRYLFEGGDRQTGEVKWTATRVDLVFGSNSILRAVAEVYAQDDAREKFVKDFVAAWTKVM 706 (716)
T ss_pred ccHHHHHHhcCCceeeecCCCCceeeeecCCCCceeeccChhheeeccCHHHHHHHHHHhcccccchHHHHHHHHHHHHH
Confidence 999999998620 1 2 278999999999999999999997 899999999999999
Q ss_pred CCC
Q 021430 297 SIN 299 (312)
Q Consensus 297 ~lg 299 (312)
+++
T Consensus 707 ~ld 709 (716)
T TIGR00198 707 NLD 709 (716)
T ss_pred hCC
Confidence 987
No 16
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=2.3e-35 Score=300.31 Aligned_cols=220 Identities=20% Similarity=0.253 Sum_probs=182.7
Q ss_pred HHHHHHHHHcCCCchhhhhHhhhccccC-------CCCCce-EeccCCCCCCCCcCCCCCC--CC-chHHHHHHHHHHHH
Q 021430 40 AAAVKAAAAKDKTVPAALLRMHFHDCFI-------RGCDAS-VLLNSKGSNKAEKDGPPNV--SL-HAFYVIDNAKKQVE 108 (312)
Q Consensus 40 r~~v~~~~~~~~~~aa~llRL~FHDcfv-------~GcDgS-ill~~~~~~~~E~~~~~N~--~L-~g~~~I~~iK~~le 108 (312)
-..+++.+....-..+.|||++||++.+ ||++|+ |.|. +|++++.|. +| +.++++++||++++
T Consensus 441 i~~lk~~i~~~gl~~~~LVr~AWhsA~Tyr~sd~rGGaNGarIRl~------Pq~~w~~N~p~~L~~vl~~LE~Ik~~f~ 514 (726)
T PRK15061 441 IAALKAKILASGLSVSELVSTAWASASTFRGSDKRGGANGARIRLA------PQKDWEVNEPAQLAKVLAVLEGIQAEFN 514 (726)
T ss_pred HHHHHHHHHhcCCcHHHHHHHHHhhcccccCCCCCCCCCccceecc------cccCccccCHHHHHHHHHHHHHHHHHHh
Confidence 3567777888888999999999999986 899999 8886 699999999 88 68999999999996
Q ss_pred hhC--CCCccHHHHHHHhhHhHHhhc---CC--CccccCCCCcCCCCCCcccc---CCCCCCC------------CChHH
Q 021430 109 TLC--PGVVSCADILALAARDAVVLS---GG--PTWDVPKGRKDGRTSKASET---VQLPAPT------------FNISQ 166 (312)
Q Consensus 109 ~~c--p~~VScADilalAar~av~~~---GG--P~~~v~~GR~D~~~s~~~~~---~~lP~p~------------~~~~~ 166 (312)
..- ...||+||+|+||+..|||.+ || |.|++.+||.|......... ..+|.+. ...+.
T Consensus 515 ~~~~~~~~vS~ADLivLaG~vAIE~aa~~aG~~~~VPf~pGR~Da~~~~td~esf~~l~P~Adgfrny~~~~~~~~~e~~ 594 (726)
T PRK15061 515 AAQSGGKKVSLADLIVLGGNAAVEQAAKAAGHDVTVPFTPGRTDATQEQTDVESFAVLEPKADGFRNYLKKGYSVSPEEL 594 (726)
T ss_pred hccCCCCceeHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCCcccCCCCcccccccCCCCccccccccccCCCCHHHH
Confidence 532 237999999999999999998 68 99999999999987643321 2456532 23478
Q ss_pred HHHHHHhcCCChhhHHhhccCc-ccccccccCCcccccCCCCCCCCCHHHHHHHhhhCCCCCCCCCCCCCCCCCCcccch
Q 021430 167 LQQSFSQRGLSMEDLAALSGGH-TLGFAHCSSFQSRINTNNADPTINPSFAESLRNICPIHNQAKNAGANMDASSATFDN 245 (312)
Q Consensus 167 l~~~F~~~Gl~~~elVaLsGaH-tiG~~hc~~f~~Rl~~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDn 245 (312)
|++.|.++|||++|||||+||| ++|..|-.++. |..+ .+|.+|||
T Consensus 595 L~d~a~~lglt~~EmvaL~Gg~r~Lg~~~~~S~~---------------------------G~~T-------~~p~~fsN 640 (726)
T PRK15061 595 LVDKAQLLTLTAPEMTVLVGGLRVLGANYGGSKH---------------------------GVFT-------DRPGVLTN 640 (726)
T ss_pred HHHHHHhCCCChHHHhheecchhhcccCCCCCCC---------------------------CCCc-------CCCCcccc
Confidence 9999999999999999999997 78888743221 2222 57999999
Q ss_pred HHHHhhccC----------c----------c---c--chhhhhhcCCcchHHHHHHhhcC--hHHHHHHHHHHHHHhhCC
Q 021430 246 TYYKLILQG----------K----------S---L--FASDQALLSHPETKNLVSKFASS--HQSFNEAFVKSMIKMSSI 298 (312)
Q Consensus 246 ~Yy~~l~~~----------~----------g---l--L~SD~~L~~d~~t~~~V~~yA~d--~~~F~~~Fa~Am~Km~~l 298 (312)
.||++|+.- . | + +.+|..|.+|++.|++|+.||.| ++.|++||++||.|++++
T Consensus 641 dfFvnLLdm~~~W~~~~~~~~~ye~~Dr~tg~~~~~~t~~Dlvfgsds~lRa~aEvYA~dd~~~kF~~DF~~Aw~Kvmel 720 (726)
T PRK15061 641 DFFVNLLDMGTEWKPTDEDEEVYEGRDRKTGEVKWTATRVDLVFGSNSQLRALAEVYASDDAKEKFVRDFVAAWTKVMNL 720 (726)
T ss_pred HHHHHHhcCCceeeecCCCCCceeeccCCCcceeeccChhheecccCHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhC
Confidence 999999951 0 1 1 47899999999999999999998 999999999999999998
Q ss_pred C
Q 021430 299 N 299 (312)
Q Consensus 299 g 299 (312)
+
T Consensus 721 d 721 (726)
T PRK15061 721 D 721 (726)
T ss_pred C
Confidence 7
No 17
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.97 E-value=1.3e-29 Score=248.21 Aligned_cols=249 Identities=20% Similarity=0.302 Sum_probs=194.8
Q ss_pred HHHHHHHHHHHcC--------CCchhhhhHhhhccccC-------CCC-CceEeccCCCCCCCCcCCCCCCCC-chHHHH
Q 021430 38 IIAAAVKAAAAKD--------KTVPAALLRMHFHDCFI-------RGC-DASVLLNSKGSNKAEKDGPPNVSL-HAFYVI 100 (312)
Q Consensus 38 iVr~~v~~~~~~~--------~~~aa~llRL~FHDcfv-------~Gc-DgSill~~~~~~~~E~~~~~N~~L-~g~~~I 100 (312)
.|+..++...... ....|-+|||+||-+.+ +|. .|... +.++.++|.|.+| +++.++
T Consensus 71 Avk~Dl~aLmtdSqdWWPAD~GhYGplfIRmAWHsAGTYRi~DGRGGa~~G~qR------FaPlnSWPDN~nLDKarRLL 144 (730)
T COG0376 71 AVKRDLKALMTDSQDWWPADFGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQR------FAPLNSWPDNANLDKARRLL 144 (730)
T ss_pred HHHHHHHHHhhcccccCcccccccccceeeeeecccCceecccCCCCCCCCcee------cccccCCCcccchHHHHHHh
Confidence 4555555554443 24889999999999986 333 22232 4578889999999 799999
Q ss_pred HHHHHHHHhhCCCCccHHHHHHHhhHhHHhhcCCCccccCCCCcCCCCCCc-----------------------------
Q 021430 101 DNAKKQVETLCPGVVSCADILALAARDAVVLSGGPTWDVPKGRKDGRTSKA----------------------------- 151 (312)
Q Consensus 101 ~~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~----------------------------- 151 (312)
.+||+++ +..||+||++.|++..|++.+|++.+.+..||.|-..+..
T Consensus 145 WPIKkKY----G~kiSWaDL~iLaGnvAlEsMGfktfGFa~GR~D~wepd~dvyWG~e~~wl~d~Ry~~~~~Le~Plaav 220 (730)
T COG0376 145 WPIKKKY----GRKISWADLIILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGSEKTWLGDERYSGDRDLENPLAAV 220 (730)
T ss_pred hhHhHhh----cccccHhHhhhhhchhhhhhcCCccccccCCCCcCCCCccccccCccccccccccccccccccCchhhh
Confidence 9999998 6799999999999999999999999999999999876654
Q ss_pred ---------cccCCCCCCCCChHHHHHHHHhcCCChhhHHhhc-cCcccccccccCCcccccCCCCCCCCCHHHHHHH--
Q 021430 152 ---------SETVQLPAPTFNISQLQQSFSQRGLSMEDLAALS-GGHTLGFAHCSSFQSRINTNNADPTINPSFAESL-- 219 (312)
Q Consensus 152 ---------~~~~~lP~p~~~~~~l~~~F~~~Gl~~~elVaLs-GaHtiG~~hc~~f~~Rl~~~~~dp~~~~~~~~~L-- 219 (312)
+.+...|+|..+..+++..|+||+++++|.|||+ ||||+|.+|...-..-+ +++|.-.+--.+.|
T Consensus 221 qMGLIYVNPEGpng~PDpl~aA~dIRetFaRMaMNDeETVALiaGGHtfGKtHGag~a~~v---g~ePe~a~ie~qGlGW 297 (730)
T COG0376 221 QMGLIYVNPEGPNGNPDPLAAARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASNV---GPEPEAAPIEQQGLGW 297 (730)
T ss_pred eeeeEEeCCCCCCCCCChhhhHHHHHHHHHHhcCCcHhhhhhhhcccccccccCCCchhhc---CCCccccchhhhcccc
Confidence 3335689999999999999999999999999998 79999999976533322 35665444444433
Q ss_pred hhhCCCC-CCCCCCCCCC---CCCCcccchHHHHhhccC-----------------------------------cccchh
Q 021430 220 RNICPIH-NQAKNAGANM---DASSATFDNTYYKLILQG-----------------------------------KSLFAS 260 (312)
Q Consensus 220 ~~~Cp~~-~~~~~~~~lD---~~tp~~FDn~Yy~~l~~~-----------------------------------~glL~S 260 (312)
.+.|..+ +.++-...+. ..||++|||+||.+|+.. ..||.+
T Consensus 298 ~~~~g~G~G~dtitsGlE~~Wt~tPT~w~n~ff~~Lf~yEWeltksPAGa~Qw~~k~~~~~~~pd~~dp~~~~~p~Mltt 377 (730)
T COG0376 298 ANTYGSGKGPDTITSGLEGAWTTTPTQWSNEFFENLFNYEWELTKSPAGAWQWDAKSAAAETIPDAHDPSKKHGPMMLTT 377 (730)
T ss_pred ccccCCCcCcccccccccccCCCCcchhhhHHHHHHhccceeeecCCCccccccccCccccCCCCCCCcccccCceeecc
Confidence 3445432 2222112222 258999999999999852 158999
Q ss_pred hhhhcCCcchHHHHHHhhcChHHHHHHHHHHHHHhhCCC
Q 021430 261 DQALLSHPETKNLVSKFASSHQSFNEAFVKSMIKMSSIN 299 (312)
Q Consensus 261 D~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lg 299 (312)
|++|--||..+++.++|..|++.|.+.|++||-||..-+
T Consensus 378 DlaLr~DP~Y~kIs~rf~e~pd~F~~~FArAWfKLtHRD 416 (730)
T COG0376 378 DLALRFDPEYEKISRRFLEDPDEFADAFARAWFKLTHRD 416 (730)
T ss_pred chhhhcChHHHHHHHHHHhCHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999999999998655
No 18
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.49 E-value=1.8e-13 Score=135.33 Aligned_cols=215 Identities=22% Similarity=0.283 Sum_probs=156.9
Q ss_pred HHHHHHHHcCCCchhhhhHhhhccccC-------CCCCce-EeccCCCCCCCCcCCCCCC--CC-chHHHHHHHHHHHHh
Q 021430 41 AAVKAAAAKDKTVPAALLRMHFHDCFI-------RGCDAS-VLLNSKGSNKAEKDGPPNV--SL-HAFYVIDNAKKQVET 109 (312)
Q Consensus 41 ~~v~~~~~~~~~~aa~llRL~FHDcfv-------~GcDgS-ill~~~~~~~~E~~~~~N~--~L-~g~~~I~~iK~~le~ 109 (312)
..++..+.+..-....|+-.+|-.+-+ +|.+|. |.|. +.++++.|. .| +-+.+++.|.+.++
T Consensus 452 ~~lK~~IlasgLsvs~lVstAWaSAsTfRgsDkRGGaNGaRirLa------PqkdWevN~P~~l~kvl~~le~iq~~fn- 524 (730)
T COG0376 452 AALKAKILASGLSVSQLVSTAWASASTFRGSDKRGGANGARIRLA------PQKDWEVNQPAELAKVLAVLEKIQKEFN- 524 (730)
T ss_pred HHHHHHHHHccCCHHHHHHHHHHhhhhccCCcccCCcCcceEeec------ccccCCCCCHHHHHHHHHHHHHHHHHhc-
Confidence 467777888888899999999998875 688887 6675 589999996 45 67899999999886
Q ss_pred hCCCCccHHHHHHHhhHhHHhhc---CCCc--cccCCCCcCCCCCCcccc--CCC-CCC------------CCChHHHHH
Q 021430 110 LCPGVVSCADILALAARDAVVLS---GGPT--WDVPKGRKDGRTSKASET--VQL-PAP------------TFNISQLQQ 169 (312)
Q Consensus 110 ~cp~~VScADilalAar~av~~~---GGP~--~~v~~GR~D~~~s~~~~~--~~l-P~p------------~~~~~~l~~ 169 (312)
..||.||+|+|++..+|+.+ +|-. +|+.+||.|......... ..| |-. ..+..-|++
T Consensus 525 ---kkvSlADlIVL~G~a~ie~AAk~aG~~v~VPF~pGR~DA~qeqtDv~sf~~LeP~aDGfRNy~~~~~~~~pe~~LvD 601 (730)
T COG0376 525 ---KKVSLADLIVLGGNAAVEKAAKAAGFSVTVPFAPGRTDASQEQTDVESFAVLEPIADGFRNYVKKDYVLTPEELLVD 601 (730)
T ss_pred ---CccchhHheeecchHHHHHHHHhcCceeeeccCCCCcccchhhcchhhhhcccccchhhhhhccCCCcCCHHHHHHH
Confidence 47999999999999999974 6654 577899999976654321 112 211 122334668
Q ss_pred HHHhcCCChhhHHhhccCcc-cccccccCCcccccCCCCCCCCCHHHHHHHhhhCCCCCCCCCCCCCCCCCCcccchHHH
Q 021430 170 SFSQRGLSMEDLAALSGGHT-LGFAHCSSFQSRINTNNADPTINPSFAESLRNICPIHNQAKNAGANMDASSATFDNTYY 248 (312)
Q Consensus 170 ~F~~~Gl~~~elVaLsGaHt-iG~~hc~~f~~Rl~~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDn~Yy 248 (312)
.-+-.+||..||++|.||-- +|.-+..+ ...|.- ..|..+.|.||
T Consensus 602 kAqlL~LtapemtVLiGGlRvLg~n~g~s--------------------------------~~GVfT--~~pg~LtndFF 647 (730)
T COG0376 602 KAQLLTLTAPEMTVLIGGLRVLGANYGGS--------------------------------KHGVFT--DRPGVLTNDFF 647 (730)
T ss_pred HHHHhccCCccceEEEcceEeeccCCCCC--------------------------------ccceec--cCcccccchhh
Confidence 88889999999999998742 33222110 001111 24666777777
Q ss_pred HhhccC----------c----------cc-----chhhhhhcCCcchHHHHHHhhcC--hHHHHHHHHHHHHHhhCCC
Q 021430 249 KLILQG----------K----------SL-----FASDQALLSHPETKNLVSKFASS--HQSFNEAFVKSMIKMSSIN 299 (312)
Q Consensus 249 ~~l~~~----------~----------gl-----L~SD~~L~~d~~t~~~V~~yA~d--~~~F~~~Fa~Am~Km~~lg 299 (312)
.||+.- + |- -..|..+-+++..|.+.+.||.| ++.|.+||.+||.|..++.
T Consensus 648 vnLlDM~~~W~~~~~~~~~feg~DrktG~~kwt~trvDLvfGsns~LRA~aEVYa~dda~ekFv~DFvaaw~kVMn~D 725 (730)
T COG0376 648 VNLLDMGTEWKPTDDARGLFEGRDRKTGEVKWTATRVDLVFGSNSELRALAEVYASDDAKEKFVKDFVAAWTKVMNLD 725 (730)
T ss_pred hhhhhccceeeeccccccceeccccccCceEeeeeEEeEEecCcHHHHHHHHHHhccchHHHHHHHHHHHHHHHhccc
Confidence 777641 1 21 35788888899999999999975 7889999999999998875
No 19
>PTZ00411 transaldolase-like protein; Provisional
Probab=77.47 E-value=37 Score=33.17 Aligned_cols=72 Identities=21% Similarity=0.303 Sum_probs=43.6
Q ss_pred hcCCCccccCCCCcCCCCCCccccCCC-CCC---CCChHHHHHHHHhcCCC----------hhhHHhhccCccccccccc
Q 021430 131 LSGGPTWDVPKGRKDGRTSKASETVQL-PAP---TFNISQLQQSFSQRGLS----------MEDLAALSGGHTLGFAHCS 196 (312)
Q Consensus 131 ~~GGP~~~v~~GR~D~~~s~~~~~~~l-P~p---~~~~~~l~~~F~~~Gl~----------~~elVaLsGaHtiG~~hc~ 196 (312)
.+|-..+..+.||.+..--.+...... +.. -..+.++...|++.|+. .+|+..|.|+|.+
T Consensus 179 eAGa~~ISPfVGRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~k~~g~~T~Im~ASfRn~~qi~~laG~D~l------ 252 (333)
T PTZ00411 179 QAGVTLISPFVGRILDWYKKPEKAESYVGAQDPGVISVTKIYNYYKKHGYKTIVMGASFRNTGEILELAGCDKL------ 252 (333)
T ss_pred HcCCCEEEeecchHHHhcccccccccccccCCchHHHHHHHHHHHHHcCCCeEEEecccCCHHHHHHHHCCCEE------
Confidence 358888999999986543222111112 212 23567788888888874 4566666666543
Q ss_pred CCcccccCCCCCCCCCHHHHHHHhh
Q 021430 197 SFQSRINTNNADPTINPSFAESLRN 221 (312)
Q Consensus 197 ~f~~Rl~~~~~dp~~~~~~~~~L~~ 221 (312)
+++|...++|..
T Consensus 253 -------------Ti~p~ll~~L~~ 264 (333)
T PTZ00411 253 -------------TISPKLLEELAN 264 (333)
T ss_pred -------------eCCHHHHHHHHh
Confidence 356667777654
No 20
>PRK05269 transaldolase B; Provisional
Probab=53.42 E-value=1.3e+02 Score=29.19 Aligned_cols=49 Identities=10% Similarity=0.027 Sum_probs=30.3
Q ss_pred hcCCCccccCCCCcCCCCCCcccc-CC---CCCCCCChHHHHHHHHhcCCChh
Q 021430 131 LSGGPTWDVPKGRKDGRTSKASET-VQ---LPAPTFNISQLQQSFSQRGLSME 179 (312)
Q Consensus 131 ~~GGP~~~v~~GR~D~~~s~~~~~-~~---lP~p~~~~~~l~~~F~~~Gl~~~ 179 (312)
.+|-..+..+.||.|...-..... .. --++-..+.++...|++.|+..+
T Consensus 169 ~AGa~~ISPfVgRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~k~~~~~t~ 221 (318)
T PRK05269 169 EAGVFLISPFVGRILDWYKKNTGKKEYAPAEDPGVVSVTKIYNYYKKHGYKTV 221 (318)
T ss_pred HcCCCEEEeeccHHHHHhhhcccccccCcCCCcHHHHHHHHHHHHHHcCCCce
Confidence 458888999999988642211100 00 11223457788889999998654
No 21
>PF11895 DUF3415: Domain of unknown function (DUF3415); InterPro: IPR024589 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Peroxidases are found in bacteria, fungi, plants and animals. Fungal ligninases are extracellular haem enzymes involved in the degradation of lignin. They include lignin peroxidases (LiPs), manganese-dependent peroxidases (MnPs) and versatile peroxidases, which combine the substrate-specificity characteristics of the other two []. In MnP, Mn2+ serves as the reducing substrate []. It is commonly thought that the plant polymer lignin is the second most abundant organic compound on Earth, exceeded only by cellulose. Higher plants synthesise vast quantities of insoluble macromolecules, including lignins. Lignin is an amorphous three-dimensional aromatic biopolymer composed of oxyphenylpropane units. Biodegradation of lignins is slow - it is probable that their decomposition is the rate-limiting step in the biospheric carbon-oxygen cycle, which is mediated almost entirely by the catabolic activities of microorganisms. The white-rot fungi are able extensively to decompose all the important structural components of wood, including both cellulose and lignin. Under the proper environmental conditions, white-rot fungi completely degrade all structural components of lignin, with ultimate formation of CO2 and H2O. The first step in lignin degradation is depolymerisation, catalysed by the LiPs (ligninases). LiPs are secreted, along with hydrogen peroxide (H2O2), by white-rot fungi under conditions of nutrient limitation. The enzymes are not only important in lignin biodegradation, but are also potentially valuable in chemical waste disposal because of their ability to degrade environmental pollutants []. To date, 3D structures have been determined for LiP [] and MnP [] from Phanerochaete chrysosporium (White-rot fungus), and for the fungal peroxidase from Arthromyces ramosus []. All these proteins share the same architecture and consist of 2 all-alpha domains, between which is embedded the haem group. The helical topography of LiPs is nearly identical to that of yeast cytochrome c peroxidase (CCP) [], despite the former having 4 disulphide bonds, which are absent in CCP (MnP has an additional disulphide bond at the C terminus). This uncharacterised C-terminal domain is found in fungal ligninases. It is about 80 amino acids in length and associated with Pfam:PF00141.; PDB: 1B85_B 1B82_A 1B80_A 1YYG_A 1YZP_A 1MNP_A 1MN1_A 1YZR_A 1MN2_A 3M8M_A ....
Probab=52.25 E-value=13 Score=28.73 Aligned_cols=17 Identities=24% Similarity=0.468 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHhhCCC
Q 021430 283 SFNEAFVKSMIKMSSIN 299 (312)
Q Consensus 283 ~F~~~Fa~Am~Km~~lg 299 (312)
...+.|..||.||+.||
T Consensus 2 ~m~~~F~~am~KlavLG 18 (80)
T PF11895_consen 2 KMQSAFKAAMAKLAVLG 18 (80)
T ss_dssp HHHHHHHHHHHHHCTTT
T ss_pred hHHHHHHHHHHHHHHhc
Confidence 35678999999999998
No 22
>TIGR00874 talAB transaldolase. This family includes the majority of known and predicted transaldolase sequences, including E. coli TalA and TalB. It excluded two other families. The first includes E. coli transaldolase-like protein TalC. The second family includes the putative transaldolases of Helicobacter pylori and Mycobacterium tuberculosis.
Probab=50.37 E-value=1.8e+02 Score=28.24 Aligned_cols=128 Identities=14% Similarity=0.225 Sum_probs=65.1
Q ss_pred hhcCCCccccCCCCcCCCCCCccccCCC----CCCCCChHHHHHHHHhcCCCh----------hhHHhhccCcccccccc
Q 021430 130 VLSGGPTWDVPKGRKDGRTSKASETVQL----PAPTFNISQLQQSFSQRGLSM----------EDLAALSGGHTLGFAHC 195 (312)
Q Consensus 130 ~~~GGP~~~v~~GR~D~~~s~~~~~~~l----P~p~~~~~~l~~~F~~~Gl~~----------~elVaLsGaHtiG~~hc 195 (312)
..+|-..|..+.||.|-..-........ -++-..+.++...|++.|+.. +|+.+|.|+|.+
T Consensus 166 a~AGa~~ISPFVgRi~dw~~~~~g~~~~~~~~d~Gv~~v~~i~~~~k~~g~~T~Im~ASfRn~~qv~~laG~d~~----- 240 (317)
T TIGR00874 166 AEAKVTLISPFVGRILDWYKAATGKKEYSIEEDPGVASVKKIYNYYKKHGYPTEVMGASFRNKEEILALAGCDRL----- 240 (317)
T ss_pred HHcCCCEEEeecchHhHhhhhccCccccccccCchHHHHHHHHHHHHHcCCCcEEEeeccCCHHHHHHHHCCCeE-----
Confidence 3468889999999987632211100011 123346777888998988854 444444444422
Q ss_pred cCCcccccCCCCCCCCCHHHHHHHhhhCCC-CC--CCCCCCCCCCCCCcccchHHHHhhccCcccchhhhhhcCCcchHH
Q 021430 196 SSFQSRINTNNADPTINPSFAESLRNICPI-HN--QAKNAGANMDASSATFDNTYYKLILQGKSLFASDQALLSHPETKN 272 (312)
Q Consensus 196 ~~f~~Rl~~~~~dp~~~~~~~~~L~~~Cp~-~~--~~~~~~~lD~~tp~~FDn~Yy~~l~~~~glL~SD~~L~~d~~t~~ 272 (312)
+++|...++|...-.. .. ........+ ..|..+|...|+-.++..+|=. ..+..
T Consensus 241 --------------Ti~p~ll~~L~~~~~~~~~~l~~~~~~~~~-~~~~~~~e~~fr~~~~~d~ma~--------ekl~~ 297 (317)
T TIGR00874 241 --------------TISPALLDELKESTGPVERKLDPESAKKVD-KQPIILDESEFRFLHNEDAMAT--------EKLAE 297 (317)
T ss_pred --------------eCCHHHHHHHHhCCCCcCccCCcccccccc-ccCCCCCHHHHHHHhCCCcchH--------HHHHH
Confidence 4677777777653210 00 000000011 2345678888864443332110 12344
Q ss_pred HHHHhhcChHHHH
Q 021430 273 LVSKFASSHQSFN 285 (312)
Q Consensus 273 ~V~~yA~d~~~F~ 285 (312)
-++.|+.|+....
T Consensus 298 gir~F~~d~~~Le 310 (317)
T TIGR00874 298 GIRKFAADQEKLE 310 (317)
T ss_pred HHHHHHHHHHHHH
Confidence 5666776665443
No 23
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=46.97 E-value=1.7e+02 Score=29.29 Aligned_cols=48 Identities=15% Similarity=0.128 Sum_probs=29.9
Q ss_pred hcCCCccccCCCCcCCCCCCccccCCCCCCC----CChHHHHHHHHhcCCCh
Q 021430 131 LSGGPTWDVPKGRKDGRTSKASETVQLPAPT----FNISQLQQSFSQRGLSM 178 (312)
Q Consensus 131 ~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~----~~~~~l~~~F~~~Gl~~ 178 (312)
.+|-..|..+.||.|...-.......+|... ..+.++...|++.|+..
T Consensus 173 eAGa~~ISPfVgRi~dw~~~~~g~~~~~~~~dpGv~~v~~i~~~~~~~~~~T 224 (391)
T PRK12309 173 EAGVTLISPFVGRILDWYKKETGRDSYPGAEDPGVQSVTQIYNYYKKFGYKT 224 (391)
T ss_pred HcCCCEEEeecchhhhhhhhccCCCccccccchHHHHHHHHHHHHHhcCCCc
Confidence 3688899999999877432211101244332 24777888888888753
No 24
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=30.74 E-value=1.4e+02 Score=24.98 Aligned_cols=62 Identities=16% Similarity=0.147 Sum_probs=41.4
Q ss_pred CCccccccCCCCHHHHHHHHHHHHHHcCCCchhhhhHhhhccccCCCCCceEeccCCCCCCCCcCCCCCCCCchHHHHHH
Q 021430 23 LSLNYYEKTCPDAEWIIAAAVKAAAAKDKTVPAALLRMHFHDCFIRGCDASVLLNSKGSNKAEKDGPPNVSLHAFYVIDN 102 (312)
Q Consensus 23 l~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~aa~llRL~FHDcfv~GcDgSill~~~~~~~~E~~~~~N~~L~g~~~I~~ 102 (312)
=+++|-.+.-- -|.-|++.+...+.+...+.|.-+|++|-..- +-..|.-|.|++++..
T Consensus 34 gs~~~~~~~vh-DeeHIkeHLegki~~~a~mtpeqlqfHYF~MH--------------------Dldknn~lDGiEl~kA 92 (144)
T KOG4065|consen 34 GSMGLDKKEVH-DEEHIKEHLEGKIEKVAKMTPEQLQFHYFSMH--------------------DLDKNNFLDGIELLKA 92 (144)
T ss_pred ccccccccccc-cHHHHHHHHhcccchhhhCCHHHHhhhhhhhh--------------------ccCcCCcchHHHHHHH
Confidence 35566665553 35667888888888888899998888874321 1223556678888776
Q ss_pred HHH
Q 021430 103 AKK 105 (312)
Q Consensus 103 iK~ 105 (312)
|.-
T Consensus 93 iTH 95 (144)
T KOG4065|consen 93 ITH 95 (144)
T ss_pred HHH
Confidence 643
No 25
>PRK12346 transaldolase A; Provisional
Probab=28.47 E-value=60 Score=31.50 Aligned_cols=89 Identities=18% Similarity=0.194 Sum_probs=51.0
Q ss_pred ccHHHHHHHhhHhHHh--hcCCCccccCCCCcCCCCCCccccCCCCC----CCCChHHHHHHHHhcCCC----------h
Q 021430 115 VSCADILALAARDAVV--LSGGPTWDVPKGRKDGRTSKASETVQLPA----PTFNISQLQQSFSQRGLS----------M 178 (312)
Q Consensus 115 VScADilalAar~av~--~~GGP~~~v~~GR~D~~~s~~~~~~~lP~----p~~~~~~l~~~F~~~Gl~----------~ 178 (312)
|+|-=-+.+....++. .+|-..|..+.||.|...........++. +-..+.++...|++.|+. .
T Consensus 150 I~~n~TliFS~~Qa~~aa~AGa~~ISPfVgRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~k~~~~~T~Vm~ASfRn~ 229 (316)
T PRK12346 150 INCNLTLLFSFAQARACAEAGVFLISPFVGRIYDWYQARKPMDPYVVEEDPGVKSVRNIYDYYKQHRYETIVMGASFRRT 229 (316)
T ss_pred CceeEEEecCHHHHHHHHHcCCCEEEecccHHHHhhhhccccccccccCCChHHHHHHHHHHHHHcCCCcEEEecccCCH
Confidence 4444334444444433 46888999999998864322111011211 223577788889888875 3
Q ss_pred hhHHhhccCcccccccccCCcccccCCCCCCCCCHHHHHHHhhh
Q 021430 179 EDLAALSGGHTLGFAHCSSFQSRINTNNADPTINPSFAESLRNI 222 (312)
Q Consensus 179 ~elVaLsGaHtiG~~hc~~f~~Rl~~~~~dp~~~~~~~~~L~~~ 222 (312)
+|+.+|.|+|.+ +++|...++|...
T Consensus 230 ~qi~alaG~d~l-------------------Ti~p~ll~~L~~~ 254 (316)
T PRK12346 230 EQILALAGCDRL-------------------TISPNLLKELQES 254 (316)
T ss_pred HHHHHHhCCCEE-------------------eCCHHHHHHHHhc
Confidence 555566665533 4667777777653
No 26
>PF09533 DUF2380: Predicted lipoprotein of unknown function (DUF2380); InterPro: IPR011755 This family consists of at least 9 paralogs in Myxococcus xanthus, a member of the Deltaproteobacteria. One appears truncated toward the N terminus; the others are predicted lipoproteins. The function is unknown.
Probab=26.74 E-value=56 Score=29.21 Aligned_cols=26 Identities=19% Similarity=0.356 Sum_probs=22.3
Q ss_pred hHHHHHHHHhcCCChhhHHhhccCcc
Q 021430 164 ISQLQQSFSQRGLSMEDLAALSGGHT 189 (312)
Q Consensus 164 ~~~l~~~F~~~Gl~~~elVaLsGaHt 189 (312)
..+|...|.++|+++.|-+.++..|.
T Consensus 107 a~~la~wF~~~Gi~IHd~ti~Ip~~v 132 (188)
T PF09533_consen 107 AEELAEWFERRGIDIHDYTIPIPRDV 132 (188)
T ss_pred cHHHHHHHHHcCCChhheeEecCHHH
Confidence 46799999999999999998887653
No 27
>PF04225 OapA: Opacity-associated protein A LysM-like domain; InterPro: IPR007340 This entry includes the Haemophilus influenzae opacity-associated protein. This protein is required for efficient nasopharyngeal mucosal colonization, and its expression is associated with a distinctive transparent colony phenotype. OapA is thought to be a secreted protein, and its expression exhibits high-frequency phase variation [].; PDB: 2GU1_A.
Probab=25.20 E-value=53 Score=25.40 Aligned_cols=25 Identities=32% Similarity=0.363 Sum_probs=18.2
Q ss_pred hHHHHHHHHhcCCChhhHHhhccCc
Q 021430 164 ISQLQQSFSQRGLSMEDLAALSGGH 188 (312)
Q Consensus 164 ~~~l~~~F~~~Gl~~~elVaLsGaH 188 (312)
-+.|...|.+.||+..||-.|+-+.
T Consensus 10 GDtLs~iF~~~gls~~dl~~v~~~~ 34 (85)
T PF04225_consen 10 GDTLSTIFRRAGLSASDLYAVLEAD 34 (85)
T ss_dssp T--HHHHHHHTT--HHHHHHHHHHG
T ss_pred CCcHHHHHHHcCCCHHHHHHHHhcc
Confidence 3578899999999999999998654
No 28
>PF08782 c-SKI_SMAD_bind: c-SKI Smad4 binding domain; InterPro: IPR014890 c-SKI is an oncoprotein that inhibits TGF-beta signalling through interaction with Smad proteins []. This protein binds to Smad4 [].; GO: 0005634 nucleus; PDB: 1MR1_C.
Probab=23.54 E-value=24 Score=28.29 Aligned_cols=15 Identities=40% Similarity=1.119 Sum_probs=9.7
Q ss_pred hhccccCCCCCceEec
Q 021430 61 HFHDCFIRGCDASVLL 76 (312)
Q Consensus 61 ~FHDcfv~GcDgSill 76 (312)
.+|+|| +||.|++..
T Consensus 4 V~HeC~-g~c~G~f~P 18 (96)
T PF08782_consen 4 VYHECF-GGCRGSFIP 18 (96)
T ss_dssp EEE-ST-T-EEEEE-G
T ss_pred eEEeec-CccceEech
Confidence 479998 799999863
No 29
>PRK01844 hypothetical protein; Provisional
Probab=22.82 E-value=1.5e+02 Score=22.57 Aligned_cols=28 Identities=14% Similarity=0.192 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHcCCCchhhhhHhhhccc
Q 021430 38 IIAAAVKAAAAKDKTVPAALLRMHFHDC 65 (312)
Q Consensus 38 iVr~~v~~~~~~~~~~aa~llRL~FHDc 65 (312)
+-|+.+++.++++|.+-...||.-|--.
T Consensus 24 ~ark~~~k~lk~NPpine~mir~Mm~QM 51 (72)
T PRK01844 24 IARKYMMNYLQKNPPINEQMLKMMMMQM 51 (72)
T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHh
Confidence 4789999999999999999999988754
No 30
>cd00957 Transaldolase_TalAB Transaldolases including both TalA and TalB. The enzyme catalyses the reversible transfer of a dyhydroxyacetone moiety, derived from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. The catalytic mechanism is similar to other class I aldolases. The enzyme is found in the non-oxidative branch of the pentose phosphate pathway and forms a dimer in solution.
Probab=21.03 E-value=1.1e+02 Score=29.67 Aligned_cols=64 Identities=16% Similarity=0.140 Sum_probs=35.1
Q ss_pred ccHHHHHHHhhHhHHh--hcCCCccccCCCCcCCCCCCccccCCCC----CCCCChHHHHHHHHhcCCCh
Q 021430 115 VSCADILALAARDAVV--LSGGPTWDVPKGRKDGRTSKASETVQLP----APTFNISQLQQSFSQRGLSM 178 (312)
Q Consensus 115 VScADilalAar~av~--~~GGP~~~v~~GR~D~~~s~~~~~~~lP----~p~~~~~~l~~~F~~~Gl~~ 178 (312)
|+|-=-+.+....|+. .+|-..+..+.||.|-..-........+ ++-..+.++...|++.|+..
T Consensus 149 I~vn~TlvFS~~Qa~~aa~AGa~~ISPfVgRi~d~~~~~~~~~~~~~~~d~Gv~~v~~i~~~~~~~~~~T 218 (313)
T cd00957 149 IHCNLTLLFSFAQAVACAEAGVTLISPFVGRILDWYKKHSGDKAYTAEEDPGVASVKKIYNYYKKFGYKT 218 (313)
T ss_pred CceeeeeecCHHHHHHHHHcCCCEEEeecchHHHhhhhccccccCCccCCcHHHHHHHHHHHHHHcCCCc
Confidence 3333333444333333 3577889999999875422111000111 12235777888998989864
No 31
>COG3763 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.01 E-value=1.2e+02 Score=22.91 Aligned_cols=29 Identities=14% Similarity=0.207 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHcCCCchhhhhHhhhcccc
Q 021430 38 IIAAAVKAAAAKDKTVPAALLRMHFHDCF 66 (312)
Q Consensus 38 iVr~~v~~~~~~~~~~aa~llRL~FHDcf 66 (312)
|.|+.+++.+.++|.+-...||+.+--..
T Consensus 24 iark~~~k~lk~NPpine~~iR~M~~qmG 52 (71)
T COG3763 24 IARKQMKKQLKDNPPINEEMIRMMMAQMG 52 (71)
T ss_pred HHHHHHHHHHhhCCCCCHHHHHHHHHHhC
Confidence 78999999999999999999999987553
Done!