Query 021432
Match_columns 312
No_of_seqs 175 out of 1351
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 02:54:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021432.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021432hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02929 NADH kinase 100.0 1.4E-68 2.9E-73 499.7 16.9 296 13-309 2-298 (301)
2 PRK14077 pnk inorganic polypho 100.0 6.9E-59 1.5E-63 434.5 10.5 262 10-312 10-275 (287)
3 PRK04539 ppnK inorganic polyph 100.0 7.8E-59 1.7E-63 435.9 9.7 268 10-312 5-281 (296)
4 PRK01911 ppnK inorganic polyph 100.0 1.8E-58 3.8E-63 432.7 10.4 266 13-312 3-276 (292)
5 PRK02649 ppnK inorganic polyph 100.0 2.5E-58 5.4E-63 433.8 10.4 272 10-312 1-281 (305)
6 PRK03372 ppnK inorganic polyph 100.0 3.7E-58 7.9E-63 432.6 11.1 269 11-312 6-286 (306)
7 PRK01185 ppnK inorganic polyph 100.0 8.3E-58 1.8E-62 423.8 10.2 254 13-312 3-257 (271)
8 PRK03378 ppnK inorganic polyph 100.0 5.8E-57 1.3E-61 422.7 10.2 267 10-312 5-277 (292)
9 PRK03501 ppnK inorganic polyph 100.0 2.3E-56 4.9E-61 412.6 10.2 207 74-312 38-255 (264)
10 PRK02231 ppnK inorganic polyph 100.0 6.1E-56 1.3E-60 411.4 12.3 210 74-312 41-258 (272)
11 PRK02155 ppnK NAD(+)/NADH kina 100.0 5.1E-56 1.1E-60 416.4 10.2 267 10-312 5-276 (291)
12 PLN02935 Bifunctional NADH kin 100.0 1.3E-55 2.7E-60 432.6 11.0 269 10-312 194-484 (508)
13 PRK01231 ppnK inorganic polyph 100.0 1.2E-55 2.6E-60 414.4 10.1 267 10-312 4-277 (295)
14 PRK03708 ppnK inorganic polyph 100.0 3.5E-55 7.5E-60 408.2 10.9 261 13-312 3-265 (277)
15 PRK04885 ppnK inorganic polyph 100.0 5.8E-55 1.3E-59 403.9 10.2 238 13-312 3-252 (265)
16 PRK00561 ppnK inorganic polyph 100.0 1.1E-53 2.4E-58 393.0 9.6 203 74-312 32-247 (259)
17 PRK14076 pnk inorganic polypho 100.0 1.2E-52 2.5E-57 425.9 11.0 259 13-308 293-556 (569)
18 PLN02727 NAD kinase 100.0 1.2E-52 2.6E-57 430.5 11.2 266 13-310 681-963 (986)
19 PRK14075 pnk inorganic polypho 100.0 8.9E-52 1.9E-56 381.5 12.7 202 74-312 40-241 (256)
20 COG0061 nadF NAD kinase [Coenz 100.0 4.4E-52 9.5E-57 388.5 10.4 259 13-310 3-266 (281)
21 PRK02645 ppnK inorganic polyph 100.0 2.4E-52 5.1E-57 394.3 8.6 263 10-312 3-282 (305)
22 PF01513 NAD_kinase: ATP-NAD k 100.0 5E-52 1.1E-56 388.9 5.0 264 13-306 2-284 (285)
23 PRK04761 ppnK inorganic polyph 100.0 4.2E-49 9.1E-54 360.2 11.7 204 73-312 23-235 (246)
24 KOG2178 Predicted sugar kinase 100.0 2.6E-46 5.6E-51 353.3 11.9 203 72-303 165-379 (409)
25 KOG4180 Predicted kinase [Gene 100.0 8.1E-37 1.8E-41 281.5 13.9 244 30-297 50-383 (395)
26 COG1597 LCB5 Sphingosine kinas 98.4 1.3E-06 2.8E-11 82.8 8.3 117 10-151 2-121 (301)
27 TIGR00147 lipid kinase, YegS/R 98.3 3.9E-07 8.5E-12 85.4 3.7 112 10-151 1-120 (293)
28 PRK00861 putative lipid kinase 98.2 8.4E-06 1.8E-10 76.9 9.1 62 74-151 56-118 (300)
29 PRK12361 hypothetical protein; 98.0 2.2E-05 4.7E-10 80.3 8.3 64 74-150 296-361 (547)
30 PRK11914 diacylglycerol kinase 97.7 3.5E-05 7.5E-10 72.9 4.3 112 10-151 8-126 (306)
31 PRK13337 putative lipid kinase 97.6 5E-05 1.1E-09 71.8 3.1 62 74-150 56-119 (304)
32 PRK13055 putative lipid kinase 97.5 7.1E-05 1.5E-09 71.9 3.2 63 74-151 58-123 (334)
33 PRK13054 lipid kinase; Reviewe 97.5 6.6E-05 1.4E-09 70.9 2.8 62 74-150 55-120 (300)
34 PRK13057 putative lipid kinase 97.4 0.00012 2.6E-09 68.6 3.1 62 74-151 49-111 (287)
35 PRK13059 putative lipid kinase 97.3 0.00017 3.6E-09 68.0 3.3 62 74-151 55-119 (295)
36 COG3199 Predicted inorganic po 97.2 0.00026 5.5E-09 67.6 2.8 68 75-158 100-167 (355)
37 PLN02958 diacylglycerol kinase 96.8 0.001 2.3E-08 67.1 3.9 62 74-151 167-240 (481)
38 TIGR03702 lip_kinase_YegS lipi 96.3 0.0034 7.3E-08 59.1 3.7 63 74-151 51-117 (293)
39 PF00781 DAGK_cat: Diacylglyce 95.4 0.007 1.5E-07 49.9 1.2 43 76-129 55-102 (130)
40 COG0205 PfkA 6-phosphofructoki 95.1 0.014 3E-07 56.5 2.5 87 74-173 93-181 (347)
41 smart00046 DAGKc Diacylglycero 94.4 0.019 4.1E-07 47.2 1.4 19 75-93 49-67 (124)
42 PLN02204 diacylglycerol kinase 91.7 0.077 1.7E-06 54.7 1.3 30 273-307 568-597 (601)
43 PRK14071 6-phosphofructokinase 90.4 0.27 5.8E-06 48.0 3.6 62 75-147 107-170 (360)
44 TIGR02483 PFK_mixed phosphofru 90.4 0.22 4.8E-06 47.9 3.0 63 74-147 93-156 (324)
45 TIGR02482 PFKA_ATP 6-phosphofr 90.1 0.16 3.5E-06 48.3 1.8 84 75-172 91-177 (301)
46 cd00763 Bacterial_PFK Phosphof 88.8 0.12 2.6E-06 49.5 -0.2 62 74-146 91-153 (317)
47 PLN02884 6-phosphofructokinase 88.3 0.31 6.7E-06 48.4 2.3 63 74-146 142-210 (411)
48 cd01743 GATase1_Anthranilate_S 86.6 0.41 8.9E-06 41.7 1.9 58 50-107 14-80 (184)
49 PRK06895 putative anthranilate 85.6 0.39 8.5E-06 42.2 1.3 35 73-107 41-81 (190)
50 PRK03202 6-phosphofructokinase 84.9 0.24 5.3E-06 47.5 -0.4 63 74-146 92-154 (320)
51 KOG4435 Predicted lipid kinase 82.5 2 4.4E-05 42.3 4.7 110 58-178 92-214 (535)
52 PTZ00286 6-phospho-1-fructokin 82.0 0.37 8E-06 48.5 -0.5 62 74-146 175-243 (459)
53 PRK06555 pyrophosphate--fructo 81.9 0.35 7.6E-06 47.8 -0.7 63 75-147 112-180 (403)
54 cd00363 PFK Phosphofructokinas 81.3 0.32 6.8E-06 47.1 -1.2 63 74-147 91-160 (338)
55 PRK14072 6-phosphofructokinase 80.6 0.39 8.4E-06 47.8 -0.9 61 75-145 103-169 (416)
56 CHL00101 trpG anthranilate syn 80.2 1.3 2.8E-05 39.0 2.4 34 74-107 42-81 (190)
57 PRK06830 diphosphate--fructose 79.4 0.5 1.1E-05 47.4 -0.6 61 74-145 171-238 (443)
58 KOG0782 Predicted diacylglycer 79.4 2.2 4.7E-05 43.8 3.9 70 79-161 420-496 (1004)
59 PTZ00287 6-phosphofructokinase 79.3 0.92 2E-05 51.0 1.4 64 75-146 928-997 (1419)
60 PRK06774 para-aminobenzoate sy 77.0 1.5 3.1E-05 38.5 1.7 33 75-107 43-81 (191)
61 PLN02564 6-phosphofructokinase 76.1 0.73 1.6E-05 46.6 -0.5 61 75-146 176-243 (484)
62 TIGR02478 6PF1K_euk 6-phosphof 75.2 1.8 4E-05 46.2 2.2 64 74-147 93-179 (745)
63 cd00764 Eukaryotic_PFK Phospho 75.1 1.9 4E-05 46.2 2.2 61 75-146 478-546 (762)
64 PRK05670 anthranilate synthase 75.0 1.9 4.1E-05 37.8 1.9 33 75-107 43-81 (189)
65 KOG3349 Predicted glycosyltran 71.6 1.1 2.4E-05 38.5 -0.3 68 67-146 72-145 (170)
66 PTZ00468 phosphofructokinase f 71.5 1 2.2E-05 50.3 -0.7 55 74-134 799-864 (1328)
67 PRK07649 para-aminobenzoate/an 70.3 3 6.5E-05 37.0 2.1 33 75-107 43-81 (195)
68 PF00365 PFK: Phosphofructokin 70.3 0.51 1.1E-05 44.5 -3.0 62 75-147 92-155 (282)
69 TIGR02477 PFKA_PPi diphosphate 69.0 1.3 2.9E-05 45.4 -0.5 54 75-134 161-220 (539)
70 PLN03028 pyrophosphate--fructo 68.8 1.1 2.5E-05 46.5 -1.0 53 75-134 173-232 (610)
71 PRK08857 para-aminobenzoate sy 68.3 4 8.6E-05 35.9 2.4 33 75-107 43-81 (193)
72 PRK07567 glutamine amidotransf 67.9 4.7 0.0001 37.0 2.9 36 72-107 48-102 (242)
73 cd01742 GATase1_GMP_Synthase T 67.3 5 0.00011 34.5 2.8 58 50-107 14-79 (181)
74 COG4069 Uncharacterized protei 67.1 4 8.7E-05 38.7 2.3 57 72-132 263-319 (367)
75 PLN02251 pyrophosphate-depende 66.6 1.6 3.5E-05 45.1 -0.4 53 75-134 190-249 (568)
76 PRK07085 diphosphate--fructose 66.6 1.3 2.9E-05 45.6 -1.1 30 75-104 164-199 (555)
77 KOG1116 Sphingosine kinase, in 66.3 5 0.00011 41.3 3.0 36 72-107 233-276 (579)
78 PLN02335 anthranilate synthase 64.1 4 8.7E-05 36.9 1.7 33 75-107 62-100 (222)
79 TIGR02478 6PF1K_euk 6-phosphof 63.7 1.9 4.1E-05 46.1 -0.7 61 75-146 478-546 (745)
80 PRK06490 glutamine amidotransf 63.1 8.4 0.00018 35.3 3.6 36 72-107 49-95 (239)
81 cd00765 Pyrophosphate_PFK Phos 61.9 2.2 4.8E-05 44.0 -0.5 53 75-134 166-225 (550)
82 TIGR00566 trpG_papA glutamine 59.4 7.5 0.00016 34.1 2.5 33 75-107 43-81 (188)
83 TIGR00888 guaA_Nterm GMP synth 58.7 4.7 0.0001 35.1 1.1 58 50-107 14-79 (188)
84 PRK07765 para-aminobenzoate sy 57.2 9.2 0.0002 34.4 2.7 35 73-107 44-85 (214)
85 PRK09065 glutamine amidotransf 56.6 15 0.00033 33.4 4.1 56 52-107 29-97 (237)
86 TIGR01815 TrpE-clade3 anthrani 56.3 6.5 0.00014 41.9 1.8 60 48-107 530-597 (717)
87 PRK07053 glutamine amidotransf 54.8 16 0.00036 33.2 4.0 35 73-107 45-92 (234)
88 PRK00758 GMP synthase subunit 54.7 7.9 0.00017 33.5 1.8 56 51-107 16-76 (184)
89 PRK13527 glutamine amidotransf 54.2 5 0.00011 35.4 0.5 58 49-107 18-86 (200)
90 PTZ00468 phosphofructokinase f 53.3 3.8 8.1E-05 46.1 -0.5 31 75-105 196-232 (1328)
91 PF02233 PNTB: NAD(P) transhyd 53.2 5.8 0.00013 40.0 0.8 49 54-103 360-409 (463)
92 PRK06186 hypothetical protein; 51.4 7.5 0.00016 35.6 1.2 36 72-107 50-91 (229)
93 PF13685 Fe-ADH_2: Iron-contai 50.9 6.5 0.00014 36.4 0.7 62 47-109 35-110 (250)
94 cd01744 GATase1_CPSase Small c 50.4 8.9 0.00019 33.1 1.5 34 74-107 38-78 (178)
95 PRK10310 PTS system galactitol 50.0 37 0.00081 26.3 4.8 34 48-81 21-56 (94)
96 PRK05637 anthranilate synthase 49.9 6.1 0.00013 35.4 0.4 33 75-107 44-82 (208)
97 PRK13181 hisH imidazole glycer 49.3 9.6 0.00021 33.5 1.5 53 51-107 16-81 (199)
98 PF04101 Glyco_tran_28_C: Glyc 48.0 3.8 8.2E-05 34.6 -1.3 35 69-106 66-100 (167)
99 PRK13566 anthranilate synthase 45.6 14 0.0003 39.4 2.3 60 48-107 540-607 (720)
100 KOG1169 Diacylglycerol kinase 45.1 19 0.0004 37.7 3.0 35 271-308 587-621 (634)
101 cd00764 Eukaryotic_PFK Phospho 44.5 6.8 0.00015 42.0 -0.3 19 74-92 96-114 (762)
102 PRK08007 para-aminobenzoate sy 44.1 14 0.0003 32.4 1.7 33 75-107 43-81 (187)
103 PRK10586 putative oxidoreducta 43.8 18 0.00039 35.2 2.6 80 27-107 20-119 (362)
104 TIGR03800 PLP_synth_Pdx2 pyrid 42.9 8 0.00017 33.9 -0.0 53 52-107 16-79 (184)
105 PRK09444 pntB pyridine nucleot 40.7 7 0.00015 39.2 -0.8 28 67-94 373-400 (462)
106 PRK08250 glutamine amidotransf 40.3 45 0.00097 30.3 4.5 36 72-107 42-93 (235)
107 PF00117 GATase: Glutamine ami 40.1 6.1 0.00013 34.2 -1.2 60 48-107 11-81 (192)
108 PRK13152 hisH imidazole glycer 40.0 16 0.00035 32.2 1.5 54 50-107 15-82 (201)
109 cd01740 GATase1_FGAR_AT Type 1 39.8 18 0.0004 32.9 1.9 58 50-107 15-91 (238)
110 PF03698 UPF0180: Uncharacteri 38.8 63 0.0014 24.7 4.3 50 49-102 12-61 (80)
111 COG1105 FruK Fructose-1-phosph 37.5 46 0.001 31.9 4.2 17 77-93 217-233 (310)
112 PRK05665 amidotransferase; Pro 34.6 55 0.0012 29.9 4.1 37 71-107 53-100 (240)
113 CHL00188 hisH imidazole glycer 34.6 16 0.00034 32.8 0.5 52 52-107 19-83 (210)
114 COG1282 PntB NAD/NADP transhyd 34.3 18 0.00039 35.5 0.9 30 65-94 373-402 (463)
115 PF03575 Peptidase_S51: Peptid 34.0 28 0.00061 29.2 2.0 60 48-107 3-78 (154)
116 cd03784 GT1_Gtf_like This fami 32.5 27 0.00057 33.6 1.8 70 72-149 301-373 (401)
117 PRK01175 phosphoribosylformylg 32.1 37 0.00079 31.6 2.5 36 72-107 45-98 (261)
118 PRK03094 hypothetical protein; 31.5 1.2E+02 0.0026 23.2 4.8 52 49-104 12-63 (80)
119 PTZ00287 6-phosphofructokinase 31.1 14 0.0003 42.0 -0.5 30 75-104 271-306 (1419)
120 cd01748 GATase1_IGP_Synthase T 29.8 19 0.00042 31.5 0.3 54 50-107 14-80 (198)
121 COG1819 Glycosyl transferases, 29.8 42 0.00091 33.1 2.7 71 72-150 297-370 (406)
122 cd08171 GlyDH-like2 Glycerol d 29.8 37 0.0008 32.6 2.2 32 74-106 77-110 (345)
123 PF12360 Pax7: Paired box prot 29.7 17 0.00037 24.5 -0.1 15 213-227 1-15 (45)
124 PF14250 AbrB-like: AbrB-like 29.5 37 0.00081 25.3 1.7 33 273-305 38-71 (71)
125 TIGR01737 FGAM_synth_I phospho 29.5 29 0.00062 31.4 1.3 35 73-107 38-87 (227)
126 PF10127 Nuc-transf: Predicted 29.3 26 0.00055 32.0 1.0 33 207-244 17-49 (247)
127 TIGR01426 MGT glycosyltransfer 27.6 41 0.00088 32.4 2.1 69 72-148 288-359 (392)
128 TIGR01855 IMP_synth_hisH imida 27.5 25 0.00055 30.9 0.6 55 50-107 14-80 (196)
129 PRK13525 glutamine amidotransf 26.8 24 0.00053 30.9 0.4 36 72-107 35-81 (189)
130 cd01750 GATase1_CobQ Type 1 gl 26.6 35 0.00076 29.9 1.3 55 49-107 14-81 (194)
131 TIGR01368 CPSaseIIsmall carbam 26.1 28 0.0006 34.0 0.7 58 49-107 186-252 (358)
132 PRK05282 (alpha)-aspartyl dipe 25.9 23 0.0005 32.5 0.0 61 47-107 50-122 (233)
133 PRK12838 carbamoyl phosphate s 25.7 28 0.0006 34.0 0.6 59 48-107 179-246 (354)
134 cd01741 GATase1_1 Subgroup of 25.2 92 0.002 26.7 3.7 36 72-107 43-90 (188)
135 PF06057 VirJ: Bacterial virul 25.0 39 0.00084 30.2 1.3 51 78-147 4-59 (192)
136 PF10087 DUF2325: Uncharacteri 24.9 67 0.0015 24.8 2.5 58 49-106 14-83 (97)
137 PRK13170 hisH imidazole glycer 24.7 28 0.00061 30.6 0.4 54 50-107 16-79 (196)
138 PF08308 PEGA: PEGA domain; I 23.7 1.5E+02 0.0032 21.1 4.0 17 265-281 4-20 (71)
139 PRK14494 putative molybdopteri 23.5 1.2E+02 0.0025 27.8 4.2 36 138-176 160-199 (229)
140 COG3490 Uncharacterized protei 23.0 67 0.0015 30.8 2.5 30 80-109 231-263 (366)
141 PRK12564 carbamoyl phosphate s 22.9 37 0.0008 33.2 0.9 59 49-107 190-257 (360)
142 CHL00197 carA carbamoyl-phosph 22.0 43 0.00093 33.0 1.1 59 49-107 205-272 (382)
143 PRK13141 hisH imidazole glycer 21.9 33 0.00071 30.2 0.2 55 50-107 15-81 (205)
144 PRK14607 bifunctional glutamin 21.9 55 0.0012 33.7 1.9 33 75-107 44-82 (534)
145 cd03132 GATase1_catalase Type 21.9 30 0.00066 28.3 0.0 34 75-108 62-105 (142)
146 PRK03619 phosphoribosylformylg 21.3 82 0.0018 28.3 2.7 54 52-107 19-88 (219)
147 cd08170 GlyDH Glycerol dehydro 20.6 40 0.00086 32.4 0.5 33 74-107 76-110 (351)
148 cd01745 GATase1_2 Subgroup of 20.6 34 0.00074 29.8 0.1 58 50-107 24-109 (189)
149 PTZ00408 NAD-dependent deacety 20.6 77 0.0017 29.1 2.4 38 72-109 169-210 (242)
No 1
>PLN02929 NADH kinase
Probab=100.00 E-value=1.4e-68 Score=499.67 Aligned_cols=296 Identities=63% Similarity=0.981 Sum_probs=267.8
Q ss_pred ccccccccCCCcccccchhHHHhhhhhhhhhhhhHHHHHHhhhcCCcceeecccccCCCccccccEEEEEcCCcceEeec
Q 021432 13 FDVYTVRQSNGISHITNPLILQHLENRCKVHKDAINFCQDILSKKPIEWEPVFRNNLSRPIRNVDLVVTVGGDGTLLQAG 92 (312)
Q Consensus 13 ~~i~~n~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~Dlvi~lGGDGT~L~a~ 92 (312)
+++|+-++.+...+...++++.+|++||+.|+++.+.++++|+++|++|..+.+.++...+.++|+||++|||||||+|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~h~~~~~~~~~~L~~~gi~~~~v~r~~~~~~~~~~Dlvi~lGGDGT~L~aa 81 (301)
T PLN02929 2 FDVYPFRQLEGSGRATNPKVLEYLEDRHKVHKDTVNFCKDILQQKSVDWECVLRNELSQPIRDVDLVVAVGGDGTLLQAS 81 (301)
T ss_pred CccccccccCcccccCChHHHHHHHHhhhhhHHHHHHHHHHHHHcCCEEEEeeccccccccCCCCEEEEECCcHHHHHHH
Confidence 45667677788889999999999999999999999999999999999998888877755678999999999999999999
Q ss_pred ccCCCCcceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhcCccccCccceEEEEecCcccCcccc
Q 021432 93 HLIDDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILEGKTVPSNLSRILIRVNSKSLPTFAL 172 (312)
Q Consensus 93 ~~~~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~g~~~~~~~~rl~~~~~g~~~~~~AL 172 (312)
|.++.++||+|||+||...+++++++|+||+.|++||||+++++++++.|+++++|+|.+++|+|+++.++|+....+||
T Consensus 82 ~~~~~~iPvlGIN~Gp~~~~~~~~~~~~~~~~r~lGfL~~~~~~~~~~~L~~il~g~~~~~~r~~L~~~v~g~~~~~~AL 161 (301)
T PLN02929 82 HFLDDSIPVLGVNSDPTQKDEVEEYSDEFDARRSTGHLCAATAEDFEQVLDDVLFGRLKPTELSRISTVVNGTLLETPAL 161 (301)
T ss_pred HHcCCCCcEEEEECCCcccccccccccccccccCccccccCCHHHHHHHHHHHHcCCceEEEeeeEEEEecCCcccceEe
Confidence 97766899999999998778889999999999999999999999999999999999999999999999998876655899
Q ss_pred cchhhhcCCccccceeEEEEecCCCCCCCCcccccCCeeeeecccchHHHHhcCCeeecccccchhhhhhccCCccchhh
Q 021432 173 NDILIAHPCPAMVSRFSFKIKSDGMPCSPLVNCRSSGLRVSTAAGSSAAMLSAGGFIMPILSHDLQYMVREPISPAAATS 252 (312)
Q Consensus 173 NDv~I~~~~~~~~~~~~~~v~~~~~~~~~~~~~~gDGviVsTptGSTAY~lSAGG~v~Pi~~p~l~~~v~tPi~p~~l~~ 252 (312)
||++|.++.++++++|+++++.+++...++.+|+|||+|||||||||||++||||++|||++|+++++++||||||+ +.
T Consensus 162 NEv~I~~~~~~~~~~~~v~i~~~g~~~~~~~~~~~DGliVsTpTGSTAY~lSAGG~i~Piv~P~l~~~vltPI~Ph~-~~ 240 (301)
T PLN02929 162 NDVLIAHPSPAAVSRFSFRVGRQGGSSGPLINVRSSGLRVSTAAGSTAAMLSAGGFPMPLLSRDLQYMVREPISPGH-PP 240 (301)
T ss_pred eEEEEccCCCccEEEEEEEEcCccCCCceeEEeecCcEEEeCCccHHHHHHhcCCCCCCCCCcccceEEEEeeCCCC-CC
Confidence 99999999999999999999743321126788999999999999999999999999999999999999999999999 66
Q ss_pred hhh-hccccCCceeeEEEeeecceEEEcCcceEEEeecCCeEEEccCCCeeeeecCCC
Q 021432 253 SLI-HGLVKSDQSMEAMWFCKEGFVYIDGSHVFVSIQNGDVIEISSKAPALKVFLPPN 309 (312)
Q Consensus 253 ~~~-~~vv~~~~~i~i~~~~~~~~l~iDG~~~~~~l~~gd~v~I~~s~~~~~l~~~~~ 309 (312)
||+ +++++++++|++++.++++.+++||++..+.++.||+|+|+++++.++++++..
T Consensus 241 r~l~~~vv~~~~~i~i~~~~~~~~i~iDG~~~~~~l~~gd~i~I~~s~~~l~l~~~~~ 298 (301)
T PLN02929 241 KSLMHGFYKPGQHMQVRWNSRKGTIYIDGSHVMHSIKLGDTIEISSDAPPLKVFLSHW 298 (301)
T ss_pred CCccccEECCCCeEEEEEeCCCEEEEECCCcceEecCCCCEEEEEECCCeEEEEEehh
Confidence 654 778999999999987778899999965678899999999999999999998764
No 2
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=100.00 E-value=6.9e-59 Score=434.49 Aligned_cols=262 Identities=19% Similarity=0.225 Sum_probs=216.4
Q ss_pred cccccccccccCCCcccccchhHHHhhhhhhhhhhhhHHHHHHhhhcCCcceeecccccCCCccccccEEEEEcCCcceE
Q 021432 10 LKPFDVYTVRQSNGISHITNPLILQHLENRCKVHKDAINFCQDILSKKPIEWEPVFRNNLSRPIRNVDLVVTVGGDGTLL 89 (312)
Q Consensus 10 ~k~~~i~~n~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~Dlvi~lGGDGT~L 89 (312)
||++++++|.. + .+...+.++..||++++....-. ......+...+.+ ..++ .+++|++|++|||||||
T Consensus 10 ~~~i~ii~~~~-~-~~~~~~~~i~~~l~~~g~~~~~~-~~~~~~~~~~~~~-----~~~~---~~~~Dlvi~iGGDGT~L 78 (287)
T PRK14077 10 IKKIGLVTRPN-V-SLDKEILKLQKILSIYKVEILLE-KESAEILDLPGYG-----LDEL---FKISDFLISLGGDGTLI 78 (287)
T ss_pred CCEEEEEeCCc-H-HHHHHHHHHHHHHHHCCCEEEEe-cchhhhhcccccc-----hhhc---ccCCCEEEEECCCHHHH
Confidence 66788888876 4 77778889999999888532211 1111112111111 0111 24689999999999999
Q ss_pred eecccC-CCCcceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhcCccccCccceEEEEe--cCc-
Q 021432 90 QAGHLI-DDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILEGKTVPSNLSRILIRV--NSK- 165 (312)
Q Consensus 90 ~a~~~~-~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~g~~~~~~~~rl~~~~--~g~- 165 (312)
+|+|.+ ..++|++|||+| ++|||+++++++++++++++++|+|.+++|+++++.+ +++
T Consensus 79 ~aa~~~~~~~~PilGIN~G------------------~lGFLt~~~~~~~~~~l~~i~~g~y~ie~r~~L~~~v~~~~~~ 140 (287)
T PRK14077 79 SLCRKAAEYDKFVLGIHAG------------------HLGFLTDITVDEAEKFFQAFFQGEFEIEKPYMLSVFLEKKQGK 140 (287)
T ss_pred HHHHHhcCCCCcEEEEeCC------------------CcccCCcCCHHHHHHHHHHHHcCCCeEEEEEEEEEEEEeCCce
Confidence 999865 468999999999 8999999999999999999999999999999999886 333
Q ss_pred ccCcccccchhhhcCCccccceeEEEEecCCCCCCCCcccccCCeeeeecccchHHHHhcCCeeecccccchhhhhhccC
Q 021432 166 SLPTFALNDILIAHPCPAMVSRFSFKIKSDGMPCSPLVNCRSSGLRVSTAAGSSAAMLSAGGFIMPILSHDLQYMVREPI 245 (312)
Q Consensus 166 ~~~~~ALNDv~I~~~~~~~~~~~~~~v~~~~~~~~~~~~~~gDGviVsTptGSTAY~lSAGG~v~Pi~~p~l~~~v~tPi 245 (312)
....+||||++|.+..++++.+++++++ ++ ++.+|+|||+||||||||||||||||| ||++|+++++++|||
T Consensus 141 ~~~~~AlNevvi~~~~~~~~~~~~v~id--~~---~~~~~~~DGlIVSTPTGSTAYslSAGG---PIv~P~~~~~~ltPI 212 (287)
T PRK14077 141 ILEKLAFNDVVISKNNQASMAHIEAFLN--EK---YFNEYFGDGVIVATPAGSTAYNMSANG---PIIYPLSQVFILTPV 212 (287)
T ss_pred EEEEEEeeeeeeccCCCccEEEEEEEEC--CE---EEEEEEcCEEEEeCCCchhHhHhhcCC---cccCCCCCeEEEEec
Confidence 2335799999999988889999888885 44 578899999999999999999999999 999999999999999
Q ss_pred CccchhhhhhhccccCCceeeEEEeeecceEEEcCcceEEEeecCCeEEEccCCCeeeeecCCCCCC
Q 021432 246 SPAAATSSLIHGLVKSDQSMEAMWFCKEGFVYIDGSHVFVSIQNGDVIEISSKAPALKVFLPPNLVY 312 (312)
Q Consensus 246 ~p~~l~~~~~~~vv~~~~~i~i~~~~~~~~l~iDG~~~~~~l~~gd~v~I~~s~~~~~l~~~~~~~~ 312 (312)
|||+++.||+ |++++.+|+++.. .++.+++||+ ....+++||+|.|++++.+++++++++.+|
T Consensus 213 ~Phsl~~rpi--Vl~~~~~I~i~~~-~~~~l~~DG~-~~~~l~~~d~i~I~~s~~~~~lv~~~~~~f 275 (287)
T PRK14077 213 CSHSLTQRPI--VLPKGFEVEFKTK-SDCILCIDGQ-DRYKMNDFKSIKVGLSDKNVALIRHKNRDY 275 (287)
T ss_pred ccccccCCCE--EECCCCEEEEEEC-CCEEEEEcCC-eeEecCCCCEEEEEECCCEEEEEECCCCCH
Confidence 9999999998 8998899999754 4788999998 578999999999999999999999888776
No 3
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=100.00 E-value=7.8e-59 Score=435.85 Aligned_cols=268 Identities=25% Similarity=0.318 Sum_probs=219.1
Q ss_pred cccccccccccCCCcccccchhHHHhhhhhhhhhhhhHHHH----HHhhhcCCcceeecccccCCCccccccEEEEEcCC
Q 021432 10 LKPFDVYTVRQSNGISHITNPLILQHLENRCKVHKDAINFC----QDILSKKPIEWEPVFRNNLSRPIRNVDLVVTVGGD 85 (312)
Q Consensus 10 ~k~~~i~~n~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~~~l~~~~~~~Dlvi~lGGD 85 (312)
||+++++.|.+ +.++...+.++..||++++....-..... ...++..+.. .....++ .+++|++|++|||
T Consensus 5 ~~~i~ii~~~~-~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~D~vi~lGGD 78 (296)
T PRK04539 5 FHNIGIVTRPN-TPDIQDTAHTLITFLKQHGFTVYLDEVGIKEGCIYTQDTVGCH--IVNKTEL---GQYCDLVAVLGGD 78 (296)
T ss_pred CCEEEEEecCC-CHHHHHHHHHHHHHHHHCCCEEEEecccccccchhcccccccc--ccchhhc---CcCCCEEEEECCc
Confidence 67788888876 77888888999999999886322100000 0000011111 0111111 2368999999999
Q ss_pred cceEeecccC-CCCcceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhcCccccCccceEEEEe--
Q 021432 86 GTLLQAGHLI-DDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILEGKTVPSNLSRILIRV-- 162 (312)
Q Consensus 86 GT~L~a~~~~-~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~g~~~~~~~~rl~~~~-- 162 (312)
||+|+|+|.+ ..++||+|||+| ++|||++++++++++.++++++|+|.+++|+++++.+
T Consensus 79 GT~L~aa~~~~~~~~PilGIN~G------------------~lGFL~~~~~~~~~~~l~~i~~g~~~~~~r~~l~~~v~~ 140 (296)
T PRK04539 79 GTFLSVAREIAPRAVPIIGINQG------------------HLGFLTQIPREYMTDKLLPVLEGKYLAEERILIEAALIR 140 (296)
T ss_pred HHHHHHHHHhcccCCCEEEEecC------------------CCeEeeccCHHHHHHHHHHHHcCCceEEEeeeEEEEEEE
Confidence 9999999875 468999999999 8999999999999999999999999999999998875
Q ss_pred cCccc-CcccccchhhhcCCccccceeEEEEecCCCCCCCCcccccCCeeeeecccchHHHHhcCCeeecccccchhhhh
Q 021432 163 NSKSL-PTFALNDILIAHPCPAMVSRFSFKIKSDGMPCSPLVNCRSSGLRVSTAAGSSAAMLSAGGFIMPILSHDLQYMV 241 (312)
Q Consensus 163 ~g~~~-~~~ALNDv~I~~~~~~~~~~~~~~v~~~~~~~~~~~~~~gDGviVsTptGSTAY~lSAGG~v~Pi~~p~l~~~v 241 (312)
+|+.. ..+||||++|.+...+++.+++++++ ++ ++.+|+|||+||||||||||||||||| ||++|++++++
T Consensus 141 ~~~~~~~~~ALNdvvi~~~~~~~~~~~~v~id--~~---~~~~~~~DGlIVsTPTGSTAYslSAGG---PIv~P~~~~~~ 212 (296)
T PRK04539 141 EGKTAERALALNDAVLSRGGAGQMIEFEVFVN--RE---FVYTQRSDGLIVSTPTGSTAYSLAAGG---PIMQAGLHAFT 212 (296)
T ss_pred CCeeeeeeeeehhhhhccCCcCceEEEEEEEC--CE---EEEEEecCeEEEECCCcHHHHHhhCCC---ceeCCCCCeEE
Confidence 45432 35799999999998889999888885 44 578899999999999999999999999 99999999999
Q ss_pred hccCCccchhhhhhhccccCCceeeEEEe-eecceEEEcCcceEEEeecCCeEEEccCCCeeeeecCCCCCC
Q 021432 242 REPISPAAATSSLIHGLVKSDQSMEAMWF-CKEGFVYIDGSHVFVSIQNGDVIEISSKAPALKVFLPPNLVY 312 (312)
Q Consensus 242 ~tPi~p~~l~~~~~~~vv~~~~~i~i~~~-~~~~~l~iDG~~~~~~l~~gd~v~I~~s~~~~~l~~~~~~~~ 312 (312)
+||||||+++.||+ |++++.+|+++.. ..++.+++||+ ..+.+++||+|+|++++++++++.+++++|
T Consensus 213 itPI~Phsl~~rpl--Vl~~~~~i~i~~~~~~~~~l~~DG~-~~~~l~~~d~i~i~~s~~~~~li~~~~~~f 281 (296)
T PRK04539 213 LVPICPQSMTNRPI--AIPDTSEIEILVTQGGDARVHFDGQ-THIDVQNLDRITIRRYRNPLRILHPTDYQY 281 (296)
T ss_pred EEecCcCcccCCCE--EECCCCEEEEEEcCCCcEEEEEcCC-ceeecCCCCEEEEEECCCceEEEEcCCCcH
Confidence 99999999999998 8999999998754 34578999998 578999999999999999999999988876
No 4
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=100.00 E-value=1.8e-58 Score=432.69 Aligned_cols=266 Identities=23% Similarity=0.354 Sum_probs=214.4
Q ss_pred ccccccccCCCcccccchhHHHhhhhhhhhhhhhHHHHHHhhhcCCc---ceeecccccCCCccccccEEEEEcCCcceE
Q 021432 13 FDVYTVRQSNGISHITNPLILQHLENRCKVHKDAINFCQDILSKKPI---EWEPVFRNNLSRPIRNVDLVVTVGGDGTLL 89 (312)
Q Consensus 13 ~~i~~n~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~l~~~~~~~Dlvi~lGGDGT~L 89 (312)
+++++|.+ +..+...+.++..||++++....-. +.....+..... +.... .......+++|++|++|||||||
T Consensus 3 igii~~~~-~~~~~~~~~~i~~~l~~~g~~v~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~dlvi~lGGDGT~L 78 (292)
T PRK01911 3 IAIFGQTY-QESASPYIQELFDELEERGAEVLIE-EKFLDFLKQDLKFHPSYDTF--SDNEELDGSADMVISIGGDGTFL 78 (292)
T ss_pred EEEEeCCC-CHHHHHHHHHHHHHHHHCCCEEEEe-cchhhhhccccccccccccc--cchhhcccCCCEEEEECCcHHHH
Confidence 66777765 7777888899999999888632211 111111111000 00000 00011123689999999999999
Q ss_pred eecccC-CCCcceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhcCccccCccceEEEEecCccc-
Q 021432 90 QAGHLI-DDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILEGKTVPSNLSRILIRVNSKSL- 167 (312)
Q Consensus 90 ~a~~~~-~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~g~~~~~~~~rl~~~~~g~~~- 167 (312)
+|+|.+ ..++||+|||+| ++|||+++++++++++++++++|+|.+++|+++++..+++..
T Consensus 79 ~aa~~~~~~~~PilGIN~G------------------~lGFLt~~~~~~~~~~l~~i~~g~~~i~~r~~L~~~~~~~~~~ 140 (292)
T PRK01911 79 RTATYVGNSNIPILGINTG------------------RLGFLATVSKEEIEETIDELLNGDYTIEERSLLQLESNPKLFG 140 (292)
T ss_pred HHHHHhcCCCCCEEEEecC------------------CCCcccccCHHHHHHHHHHHHcCCceEEEEeeEEEEEcCCcce
Confidence 999865 468999999999 899999999999999999999999999999999998766532
Q ss_pred -CcccccchhhhcCCccccceeEEEEecCCCCCCCCcccccCCeeeeecccchHHHHhcCCeeecccccchhhhhhccCC
Q 021432 168 -PTFALNDILIAHPCPAMVSRFSFKIKSDGMPCSPLVNCRSSGLRVSTAAGSSAAMLSAGGFIMPILSHDLQYMVREPIS 246 (312)
Q Consensus 168 -~~~ALNDv~I~~~~~~~~~~~~~~v~~~~~~~~~~~~~~gDGviVsTptGSTAY~lSAGG~v~Pi~~p~l~~~v~tPi~ 246 (312)
..+||||++|.+...+++.+++++++ ++ ++.+|+|||+||||||||||||||||| ||++|+++++++||||
T Consensus 141 ~~~~alNdvvi~r~~~~~~i~~~v~id--g~---~~~~~~~DGlIVsTPTGSTAYslSAGG---PIv~P~~~~~~ltPI~ 212 (292)
T PRK01911 141 ELNFALNEIAILKRDTSSMITVHTYLN--GE---YLNSYWADGLIVATPTGSTGYSLSCGG---PIIVPDAKSFVITPIA 212 (292)
T ss_pred eeeEEEEEEEEecCCCCcEEEEEEEEC--CE---EEEEEeeceeEECCCCcHHHHHhhCCC---cccCCCCCEEEEEecc
Confidence 35799999999988888888888884 54 578899999999999999999999999 9999999999999999
Q ss_pred ccchhhhhhhccccCCceeeEEEee--ecceEEEcCcceEEEeecCCeEEEccCCCeeeeecCCCCCC
Q 021432 247 PAAATSSLIHGLVKSDQSMEAMWFC--KEGFVYIDGSHVFVSIQNGDVIEISSKAPALKVFLPPNLVY 312 (312)
Q Consensus 247 p~~l~~~~~~~vv~~~~~i~i~~~~--~~~~l~iDG~~~~~~l~~gd~v~I~~s~~~~~l~~~~~~~~ 312 (312)
||+++.||+ |++.+.+|++++.+ .++.+++||+ . .++++||+|+|++++..++++.+++++|
T Consensus 213 Ph~l~~Rpl--Vl~~~~~I~i~~~~~~~~~~l~~DG~-~-~~l~~gd~v~i~~s~~~~~lv~~~~~~f 276 (292)
T PRK01911 213 PHNLNVRPL--VIPDDTEITLEVESRSDNFLVSLDSR-S-ETVDNGTELTIKKADFTIKLVELNNHSF 276 (292)
T ss_pred cCccCCCCE--EECCCCEEEEEEecCCCceEEEEeCC-e-eecCCCCEEEEEECCCeEEEEEeCCCcH
Confidence 999999998 89988999998653 3457899998 4 5899999999999999999999888776
No 5
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=100.00 E-value=2.5e-58 Score=433.80 Aligned_cols=272 Identities=19% Similarity=0.275 Sum_probs=217.6
Q ss_pred cccccccccccCCCcccccchhHHHhhhhhhhhhhhhHHHHHHhhhcCC----cceeecccccCCCccccccEEEEEcCC
Q 021432 10 LKPFDVYTVRQSNGISHITNPLILQHLENRCKVHKDAINFCQDILSKKP----IEWEPVFRNNLSRPIRNVDLVVTVGGD 85 (312)
Q Consensus 10 ~k~~~i~~n~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~l~~~~~~~Dlvi~lGGD 85 (312)
||+++|++|.. +..+...+.++..||++++....-... ....+.... ......+........+++|++|++|||
T Consensus 1 m~~igiv~n~~-~~~~~~~~~~l~~~L~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dlvi~iGGD 78 (305)
T PRK02649 1 MPKAGIIYNDG-KPLAVRTAEELQDKLEAAGWEVVRASS-SGGILGYANPDQPVCHTGIDQLVPPGFDSSMKFAIVLGGD 78 (305)
T ss_pred CCEEEEEEcCC-CHHHHHHHHHHHHHHHHCCCEEEEecc-hhhhcCccccccccccccccccChhhcccCcCEEEEEeCc
Confidence 66788888876 677777889999999988864321111 111111000 000000000001112368999999999
Q ss_pred cceEeecccC-CCCcceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhcCccccCccceEEEEe--
Q 021432 86 GTLLQAGHLI-DDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILEGKTVPSNLSRILIRV-- 162 (312)
Q Consensus 86 GT~L~a~~~~-~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~g~~~~~~~~rl~~~~-- 162 (312)
||||+|+|.+ ..++|++|||+| ++|||++++++++++.++++++|+|.+++|+++++.+
T Consensus 79 GTlL~aar~~~~~~iPilGIN~G------------------~lGFLt~~~~~~~~~~l~~l~~g~y~ie~r~~L~~~v~~ 140 (305)
T PRK02649 79 GTVLSAARQLAPCGIPLLTINTG------------------HLGFLTEAYLNQLDEAIDQVLAGQYTIEERTMLTVSVMR 140 (305)
T ss_pred HHHHHHHHHhcCCCCcEEEEeCC------------------CCcccccCCHHHHHHHHHHHHcCCcEEEEeeeEEEEEEE
Confidence 9999999864 568999999999 8999999999999999999999999999999999886
Q ss_pred cCccc-CcccccchhhhcCCccccceeEEEEecCCCCCCCCcccccCCeeeeecccchHHHHhcCCeeecccccchhhhh
Q 021432 163 NSKSL-PTFALNDILIAHPCPAMVSRFSFKIKSDGMPCSPLVNCRSSGLRVSTAAGSSAAMLSAGGFIMPILSHDLQYMV 241 (312)
Q Consensus 163 ~g~~~-~~~ALNDv~I~~~~~~~~~~~~~~v~~~~~~~~~~~~~~gDGviVsTptGSTAY~lSAGG~v~Pi~~p~l~~~v 241 (312)
+++.. ..+||||++|.+...+++.+++++++ ++ ++.+|+|||+||||||||||||||||| ||++|++++++
T Consensus 141 ~~~~~~~~~ALNevvi~~~~~~~~~~~~v~id--~~---~~~~~~~DGlIVsTPTGSTAYslSAGG---PIv~P~~~~~~ 212 (305)
T PRK02649 141 GDQLRWEALSLNEMVLHREPLTSMCHFEIAIG--RH---APVDIAADGVILSTPTGSTAYSLSAGG---PVITPDVPVLQ 212 (305)
T ss_pred CCcceeeeeeeeeeeeecCCCccEEEEEEEEC--CE---EEEEEecCeEEEeCCCcHHHHHhhCCC---cccCCCCCeEE
Confidence 34432 35799999999888888888888885 44 578899999999999999999999999 99999999999
Q ss_pred hccCCccchhhhhhhccccCCceeeEEEee-ecceEEEcCcceEEEeecCCeEEEccCCCeeeeecCCCCCC
Q 021432 242 REPISPAAATSSLIHGLVKSDQSMEAMWFC-KEGFVYIDGSHVFVSIQNGDVIEISSKAPALKVFLPPNLVY 312 (312)
Q Consensus 242 ~tPi~p~~l~~~~~~~vv~~~~~i~i~~~~-~~~~l~iDG~~~~~~l~~gd~v~I~~s~~~~~l~~~~~~~~ 312 (312)
+||||||+++.||+ |++++++|+++... .++.+++||+ ....+++||+|+|++|+.+++++..++++|
T Consensus 213 itPI~Phsl~~Rpl--Vlp~~~~I~i~~~~~~~~~l~~DG~-~~~~l~~gd~i~I~~s~~~~~lv~~~~~~f 281 (305)
T PRK02649 213 LTPICPHSLASRAL--VFSDSEPVTVFPATPERLVMVVDGN-AGCYVWPEDRVLIRRSPYPVRFIRLQDPEF 281 (305)
T ss_pred EEecCcCCCCCCCE--EECCCCEEEEEecCCCcEEEEEecc-eeEecCCCCEEEEEECCCEEEEEEcCCCCH
Confidence 99999999999998 89888899997543 4567899998 578999999999999999999999988776
No 6
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=100.00 E-value=3.7e-58 Score=432.62 Aligned_cols=269 Identities=19% Similarity=0.297 Sum_probs=216.4
Q ss_pred ccccccccccCCCcccccchhHHHhhhhhhhhhhhhHHHHHHhhhc-C-----CcceeecccccCCCccccccEEEEEcC
Q 021432 11 KPFDVYTVRQSNGISHITNPLILQHLENRCKVHKDAINFCQDILSK-K-----PIEWEPVFRNNLSRPIRNVDLVVTVGG 84 (312)
Q Consensus 11 k~~~i~~n~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~-~-----~~~~~~~~~~~l~~~~~~~Dlvi~lGG 84 (312)
|++++++|.. +..+...+.++..||++++....-... ....+.. . +++...+... ....+++|++|++||
T Consensus 6 ~~I~iv~~~~-~~~~~~~~~~l~~~L~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~vi~lGG 81 (306)
T PRK03372 6 RRVLLVAHTG-RDEATEAARRVAKQLGDAGIGVRVLDA-EAVDLGATHPAPDDFRAMEVVDAD--PDAADGCELVLVLGG 81 (306)
T ss_pred cEEEEEecCC-CHHHHHHHHHHHHHHHHCCCEEEEeec-hhhhhcccccccccccccccccch--hhcccCCCEEEEEcC
Confidence 4455666655 677777889999999998863221111 1111111 0 1111111100 111246899999999
Q ss_pred CcceEeecccC-CCCcceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhcCccccCccceEEEEe-
Q 021432 85 DGTLLQAGHLI-DDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILEGKTVPSNLSRILIRV- 162 (312)
Q Consensus 85 DGT~L~a~~~~-~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~g~~~~~~~~rl~~~~- 162 (312)
|||+|+|+|.+ ..++|++|||+| ++|||+++++++++++++++++|+|.+++|+++++.+
T Consensus 82 DGT~L~aar~~~~~~~PilGIN~G------------------~lGFL~~~~~~~~~~~l~~i~~g~y~i~~R~~L~~~v~ 143 (306)
T PRK03372 82 DGTILRAAELARAADVPVLGVNLG------------------HVGFLAEAEAEDLDEAVERVVDRDYRVEERMTLDVTVR 143 (306)
T ss_pred CHHHHHHHHHhccCCCcEEEEecC------------------CCceeccCCHHHHHHHHHHHHcCCceEEEeeeEEEEEE
Confidence 99999999864 468999999999 8999999999999999999999999999999998775
Q ss_pred -cCccc-CcccccchhhhcCCccccceeEEEEecCCCCCCCCcccccCCeeeeecccchHHHHhcCCeeecccccchhhh
Q 021432 163 -NSKSL-PTFALNDILIAHPCPAMVSRFSFKIKSDGMPCSPLVNCRSSGLRVSTAAGSSAAMLSAGGFIMPILSHDLQYM 240 (312)
Q Consensus 163 -~g~~~-~~~ALNDv~I~~~~~~~~~~~~~~v~~~~~~~~~~~~~~gDGviVsTptGSTAY~lSAGG~v~Pi~~p~l~~~ 240 (312)
+|+.. ..+||||++|.+..++++.+++++++ ++ ++.+|+|||+||||||||||||||||| ||++|+++++
T Consensus 144 ~~g~~~~~~~ALNdvvi~r~~~~~~~~~~v~id--g~---~~~~~~~DGlIVsTPTGSTAYslSAGG---PIv~P~~~~~ 215 (306)
T PRK03372 144 VGGEIVWRGWALNEASLEKADREGMLEVVLEVD--GR---PVSSFGCDGVLVSTPTGSTAYAFSAGG---PVVWPDLEAL 215 (306)
T ss_pred ECCEEEeeeeEEEeEEeecCCCCcEEEEEEEEC--CE---EEEEEecCEEEEeCCCchHHHHhhcCC---cccCCCCCeE
Confidence 55543 35799999999998889988888885 44 578999999999999999999999999 9999999999
Q ss_pred hhccCCccchhhhhhhccccCCceeeEEEee--ecceEEEcCcceEEEeecCCeEEEccCCCeeeeecCCCCCC
Q 021432 241 VREPISPAAATSSLIHGLVKSDQSMEAMWFC--KEGFVYIDGSHVFVSIQNGDVIEISSKAPALKVFLPPNLVY 312 (312)
Q Consensus 241 v~tPi~p~~l~~~~~~~vv~~~~~i~i~~~~--~~~~l~iDG~~~~~~l~~gd~v~I~~s~~~~~l~~~~~~~~ 312 (312)
++||||||+++.||+ |++++++|+++... .++.+++||+ ....+++||+|.|++++++++++.+++++|
T Consensus 216 ~itPI~Ph~l~~Rpl--Vv~~~~~I~i~~~~~~~~~~l~~DG~-~~~~l~~gd~i~i~~s~~~~~lv~~~~~~f 286 (306)
T PRK03372 216 LVVPLNAHALFARPL--VVSPTSTVAVEILADTSDAVLWCDGR-RSVDLPPGARVEVRRGATPVRLARLDSAPF 286 (306)
T ss_pred EEEecccccCCCCCe--EECCCCEEEEEEecCCCcEEEEEcCC-eeEecCCCCEEEEEECCCeEEEEEeCCCCH
Confidence 999999999999998 99999999998643 4678999998 578999999999999999999999988776
No 7
>PRK01185 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=100.00 E-value=8.3e-58 Score=423.85 Aligned_cols=254 Identities=22% Similarity=0.302 Sum_probs=209.7
Q ss_pred ccccccccCCCcccccchhHHHhhhhhhhhhhhhHHHHHHhhhcCCcceeecccccCCCccccccEEEEEcCCcceEeec
Q 021432 13 FDVYTVRQSNGISHITNPLILQHLENRCKVHKDAINFCQDILSKKPIEWEPVFRNNLSRPIRNVDLVVTVGGDGTLLQAG 92 (312)
Q Consensus 13 ~~i~~n~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~Dlvi~lGGDGT~L~a~ 92 (312)
++++.|.. ++.+...+.++..|| .++....-. ....+.+..... ... .. ++|++|++|||||+|+|+
T Consensus 3 i~iv~~~~-~~~~~~~~~~i~~~l-~~g~~~~~~-~~~~~~~~~~~~--------~~~-~~-~~D~vi~lGGDGT~L~a~ 69 (271)
T PRK01185 3 VAFVIRKD-CKRCIKIAKSIIELL-PPDWEIIYE-MEAAKALGMDGL--------DIE-EI-NADVIITIGGDGTILRTL 69 (271)
T ss_pred EEEEecCC-CHHHHHHHHHHHHHH-hcCCEEEEe-chhhhhcCcccC--------ccc-cc-CCCEEEEEcCcHHHHHHH
Confidence 66777765 677777788899999 444321110 111111111100 011 12 689999999999999999
Q ss_pred ccCCCCcceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhcCccccCccceEEEEecCcccCcccc
Q 021432 93 HLIDDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILEGKTVPSNLSRILIRVNSKSLPTFAL 172 (312)
Q Consensus 93 ~~~~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~g~~~~~~~~rl~~~~~g~~~~~~AL 172 (312)
|.+. .|++|||+| ++|||++++++++++.|+++++|+|.+++|+++++.++|+. ..+||
T Consensus 70 ~~~~--~PilGIN~G------------------~lGFL~~~~~~~~~~~l~~i~~g~~~i~~r~~L~~~v~g~~-~~~aL 128 (271)
T PRK01185 70 QRAK--GPILGINMG------------------GLGFLTEIEIDEVGSAIKKLIRGEYFIDERMKLKVYINGER-LEDCT 128 (271)
T ss_pred HHcC--CCEEEEECC------------------CCccCcccCHHHHHHHHHHHHcCCcEEEEeeEEEEEECCcE-eEEEE
Confidence 9764 599999999 89999999999999999999999999999999999988764 35799
Q ss_pred cchhhhcCCccccceeEEEEecCCCCCCCCcccccCCeeeeecccchHHHHhcCCeeecccccchhhhhhccCCccchhh
Q 021432 173 NDILIAHPCPAMVSRFSFKIKSDGMPCSPLVNCRSSGLRVSTAAGSSAAMLSAGGFIMPILSHDLQYMVREPISPAAATS 252 (312)
Q Consensus 173 NDv~I~~~~~~~~~~~~~~v~~~~~~~~~~~~~~gDGviVsTptGSTAY~lSAGG~v~Pi~~p~l~~~v~tPi~p~~l~~ 252 (312)
||++|.+..++++.+++++++ ++ ++.+|+|||+||||||||||||||||| ||++|+++++++||||||+++.
T Consensus 129 Ndvvv~~~~~~~~i~~~v~i~--~~---~~~~~~~DGlIVsTPTGSTAYslSAGG---PIv~P~~~~~~ltPI~Ph~l~~ 200 (271)
T PRK01185 129 NEAVIHTDRIAKIRQFKIYYD--GH---FLDTFKADGVIVATPTGSTSYSSSAGG---PILLPNLEGMVISYIAPYSSRP 200 (271)
T ss_pred EEEEEecCCCCcEEEEEEEEC--CE---EEEEEEeeEEEEeCCCchHHHHhhCCC---ceeCCCCCeEEEEecccCCCCC
Confidence 999999998899999998885 44 578899999999999999999999999 9999999999999999999999
Q ss_pred hhhhccccCCceeeEEEee-ecceEEEcCcceEEEeecCCeEEEccCCCeeeeecCCCCCC
Q 021432 253 SLIHGLVKSDQSMEAMWFC-KEGFVYIDGSHVFVSIQNGDVIEISSKAPALKVFLPPNLVY 312 (312)
Q Consensus 253 ~~~~~vv~~~~~i~i~~~~-~~~~l~iDG~~~~~~l~~gd~v~I~~s~~~~~l~~~~~~~~ 312 (312)
||+ |++++++|++++.. .++.+++||+ ..+++++||+|+|+++++.+++++.++ +|
T Consensus 201 rpl--Vl~~~~~I~i~~~~~~~~~l~~DG~-~~~~l~~~d~i~i~~s~~~~~~v~~~~-~f 257 (271)
T PRK01185 201 KSV--VVPSESTVEIKIAGDQSSLLILDGQ-YEYKISKGDTVEISKSENYARFISFRE-SP 257 (271)
T ss_pred CCE--EECCCCEEEEEEcCCCCEEEEECCC-ceEecCCCCEEEEEECCCeeEEEEcCC-CH
Confidence 998 99999999998643 4678999998 578999999999999999999998876 55
No 8
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=100.00 E-value=5.8e-57 Score=422.66 Aligned_cols=267 Identities=23% Similarity=0.319 Sum_probs=217.2
Q ss_pred cccccccccccCCCcccccchhHHHhhhhhhhhhhhhHHHHHHhhhcCCcceeecccccCCCccccccEEEEEcCCcceE
Q 021432 10 LKPFDVYTVRQSNGISHITNPLILQHLENRCKVHKDAINFCQDILSKKPIEWEPVFRNNLSRPIRNVDLVVTVGGDGTLL 89 (312)
Q Consensus 10 ~k~~~i~~n~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~Dlvi~lGGDGT~L 89 (312)
||++++++|.. +..+...+.++..||++++....-. +.....++ .... .........+++|++|++|||||+|
T Consensus 5 ~~~i~iv~~~~-~~~~~~~~~~i~~~l~~~g~~v~~~-~~~~~~~~---~~~~--~~~~~~~~~~~~d~vi~lGGDGT~L 77 (292)
T PRK03378 5 FKCIGIVGHPR-HPTALTTHEMLYHWLTSKGYEVIVE-QQIAHELQ---LKNV--KTGTLAEIGQQADLAIVVGGDGNML 77 (292)
T ss_pred CCEEEEEEeCC-CHHHHHHHHHHHHHHHHCCCEEEEe-cchhhhcC---cccc--cccchhhcCCCCCEEEEECCcHHHH
Confidence 66777888776 7777888899999999888532210 11111111 1000 0001111124689999999999999
Q ss_pred eecccC-CCCcceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhcCccccCccceEEEEec--Ccc
Q 021432 90 QAGHLI-DDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILEGKTVPSNLSRILIRVN--SKS 166 (312)
Q Consensus 90 ~a~~~~-~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~g~~~~~~~~rl~~~~~--g~~ 166 (312)
+|+|.+ ..++|++|||+| ++|||+++++++++++++++++|+|.+++|+++++.+. ++.
T Consensus 78 ~aa~~~~~~~~Pilgin~G------------------~lGFl~~~~~~~~~~~l~~i~~g~~~i~~r~~L~~~v~~~~~~ 139 (292)
T PRK03378 78 GAARVLARYDIKVIGINRG------------------NLGFLTDLDPDNALQQLSDVLEGHYISEKRFLLEAQVCRHGQQ 139 (292)
T ss_pred HHHHHhcCCCCeEEEEECC------------------CCCcccccCHHHHHHHHHHHHcCCceEEEEEEEEEEEEeCCce
Confidence 999875 457999999999 89999999999999999999999999999999988753 332
Q ss_pred c-CcccccchhhhcCCccccceeEEEEecCCCCCCCCcccccCCeeeeecccchHHHHhcCCeeecccccchhhhhhccC
Q 021432 167 L-PTFALNDILIAHPCPAMVSRFSFKIKSDGMPCSPLVNCRSSGLRVSTAAGSSAAMLSAGGFIMPILSHDLQYMVREPI 245 (312)
Q Consensus 167 ~-~~~ALNDv~I~~~~~~~~~~~~~~v~~~~~~~~~~~~~~gDGviVsTptGSTAY~lSAGG~v~Pi~~p~l~~~v~tPi 245 (312)
. ..+||||++|.+...+++.+++++++ ++ ++.+|+|||+|||||||||||+||||| |+++|+++++++|||
T Consensus 140 ~~~~~aLNdvvi~~~~~~~~i~~~v~id--g~---~~~~~~~DGlIvsTptGSTAYslSAGG---Pii~P~~~~~~itPI 211 (292)
T PRK03378 140 KRISTAINEVVLHPGKVAHMIEFEVYID--DN---FAFSQRSDGLIISTPTGSTAYSLSAGG---PILTPSLDAITLVPM 211 (292)
T ss_pred EEeEEEEEEEEEccCCCccEEEEEEEEC--CE---EEEEEEccEEEEeCCCchHHhHhhcCC---ceeCCCCCeEEEEec
Confidence 2 35799999999988888888888885 44 578899999999999999999999999 999999999999999
Q ss_pred CccchhhhhhhccccCCceeeEEEee--ecceEEEcCcceEEEeecCCeEEEccCCCeeeeecCCCCCC
Q 021432 246 SPAAATSSLIHGLVKSDQSMEAMWFC--KEGFVYIDGSHVFVSIQNGDVIEISSKAPALKVFLPPNLVY 312 (312)
Q Consensus 246 ~p~~l~~~~~~~vv~~~~~i~i~~~~--~~~~l~iDG~~~~~~l~~gd~v~I~~s~~~~~l~~~~~~~~ 312 (312)
|||+++.||+ |++++++|+++... .++.+++||+ ...++++||+|.|++++++++++.+.+++|
T Consensus 212 ~Phsl~~rpl--Vl~~~~~i~i~~~~~~~~~~l~~DG~-~~~~l~~gd~i~i~~s~~~~~lv~~~~~~f 277 (292)
T PRK03378 212 FPHTLSARPL--VIDSSSTIRLKFSPNRSDLEISCDSQ-IALPIQPGEEVLIRRSDYHLNLIHPKDYSY 277 (292)
T ss_pred ccccCCCCCE--EECCCCEEEEEEccCCCcEEEEECCc-eEEEcCCCcEEEEEECCCEEEEEEcCCCCH
Confidence 9999999998 99999999998643 4568999997 579999999999999999999999988776
No 9
>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=100.00 E-value=2.3e-56 Score=412.61 Aligned_cols=207 Identities=18% Similarity=0.323 Sum_probs=183.7
Q ss_pred ccccEEEEEcCCcceEeecccCC-C-CcceeeccC-CCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhcCcc
Q 021432 74 RNVDLVVTVGGDGTLLQAGHLID-D-SIPVLGVNS-DPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILEGKT 150 (312)
Q Consensus 74 ~~~Dlvi~lGGDGT~L~a~~~~~-~-~~PilGIN~-G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~g~~ 150 (312)
+++|++|++|||||||+|+|.+. . ++|++|||+ | ++|||++++++++++.++++++|+|
T Consensus 38 ~~~D~vi~lGGDGT~L~a~~~~~~~~~~pilgIn~~G------------------~lGFL~~~~~~~~~~~l~~i~~g~~ 99 (264)
T PRK03501 38 KNANIIVSIGGDGTFLQAVRKTGFREDCLYAGISTKD------------------QLGFYCDFHIDDLDKMIQAITKEEI 99 (264)
T ss_pred CCccEEEEECCcHHHHHHHHHhcccCCCeEEeEecCC------------------CCeEcccCCHHHHHHHHHHHHcCCc
Confidence 35899999999999999998653 3 689999999 6 8999999999999999999999999
Q ss_pred ccCccceEEEEecCcccCcccccchhhhcCCccccceeEEEEecCCCCCCCCcccccCCeeeeecccchHHHHhcCCeee
Q 021432 151 VPSNLSRILIRVNSKSLPTFALNDILIAHPCPAMVSRFSFKIKSDGMPCSPLVNCRSSGLRVSTAAGSSAAMLSAGGFIM 230 (312)
Q Consensus 151 ~~~~~~rl~~~~~g~~~~~~ALNDv~I~~~~~~~~~~~~~~v~~~~~~~~~~~~~~gDGviVsTptGSTAY~lSAGG~v~ 230 (312)
.+++|+++++.++++. ..+||||++| +...+++.+++++++ ++ ++.+|+|||+|||||||||||++||||
T Consensus 100 ~~~~r~~l~~~v~~~~-~~~alNevvi-~~~~~~~~~~~v~id--~~---~~~~~~~DGlIVsTPtGSTAY~lSAGG--- 169 (264)
T PRK03501 100 EVRKYPTIEVTVDGST-SFYCLNEFSI-RSSIIKTFVIDVYID--DL---HFETFRGDGMVVSTPTGSTAYNKSVRG--- 169 (264)
T ss_pred EEEEeeeEEEEECCcc-ceEEEEEEEE-cCCCCceEEEEEEEC--CE---EeEEEecCEEEEeCCCchHHHHhhcCC---
Confidence 9999999999987764 3579999999 666677888888885 44 578999999999999999999999999
Q ss_pred cccccchhhhhhccCCccchh-h----hhhhccccCCceeeEEEee---ecceEEEcCcceEEEeecCCeEEEccCCCee
Q 021432 231 PILSHDLQYMVREPISPAAAT-S----SLIHGLVKSDQSMEAMWFC---KEGFVYIDGSHVFVSIQNGDVIEISSKAPAL 302 (312)
Q Consensus 231 Pi~~p~l~~~v~tPi~p~~l~-~----~~~~~vv~~~~~i~i~~~~---~~~~l~iDG~~~~~~l~~gd~v~I~~s~~~~ 302 (312)
||++|+++++++||||||+++ . ||+ |++++++|+++... .+..+++||+ . .++++||+|.|++++..+
T Consensus 170 PIv~P~~~~~~itPI~P~~~~~~~~l~rpi--Vl~~~~~I~i~~~~~~~~~~~l~~DG~-~-~~l~~~d~i~I~~s~~~~ 245 (264)
T PRK03501 170 AVVDPLIPCFQVSELASLNNNTYRTLGSPF--ILSHERKLTLKIVQDGNDYPIIGMDNE-A-LSIKHVEKIDIRLSDKQI 245 (264)
T ss_pred cccCCCCCeEEEEeccccCccccccCCCCE--EECCCCEEEEEEecCCCCcEEEEEeCC-E-EEcCCCCEEEEEECCCEE
Confidence 999999999999999999886 3 777 89999999998653 2457899997 5 899999999999999999
Q ss_pred eeecCCCCCC
Q 021432 303 KVFLPPNLVY 312 (312)
Q Consensus 303 ~l~~~~~~~~ 312 (312)
+++.+++++|
T Consensus 246 ~lv~~~~~~f 255 (264)
T PRK03501 246 KTVKLKDNSF 255 (264)
T ss_pred EEEEeCCCCH
Confidence 9999988876
No 10
>PRK02231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=100.00 E-value=6.1e-56 Score=411.36 Aligned_cols=210 Identities=26% Similarity=0.404 Sum_probs=188.9
Q ss_pred ccccEEEEEcCCcceEeecccC-CCCcceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhc-Cccc
Q 021432 74 RNVDLVVTVGGDGTLLQAGHLI-DDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILE-GKTV 151 (312)
Q Consensus 74 ~~~Dlvi~lGGDGT~L~a~~~~-~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~-g~~~ 151 (312)
+++|++|++|||||+|+|+|.+ ..++|++|||+| ++|||++++++++.+.++++++ |+|.
T Consensus 41 ~~~d~vi~iGGDGT~L~aa~~~~~~~~PilgIn~G------------------~lGFL~~~~~~~~~~~l~~~~~~g~~~ 102 (272)
T PRK02231 41 QRAQLAIVIGGDGNMLGRARVLAKYDIPLIGINRG------------------NLGFLTDIDPKNAYEQLEACLERGEFF 102 (272)
T ss_pred cCCCEEEEECCcHHHHHHHHHhccCCCcEEEEeCC------------------CCcccccCCHHHHHHHHHHHHhcCCce
Confidence 3689999999999999999865 468999999999 8999999999999999999998 9999
Q ss_pred cCccceEEEEe--cCccc-CcccccchhhhcCCccccceeEEEEecCCCCCCCCcccccCCeeeeecccchHHHHhcCCe
Q 021432 152 PSNLSRILIRV--NSKSL-PTFALNDILIAHPCPAMVSRFSFKIKSDGMPCSPLVNCRSSGLRVSTAAGSSAAMLSAGGF 228 (312)
Q Consensus 152 ~~~~~rl~~~~--~g~~~-~~~ALNDv~I~~~~~~~~~~~~~~v~~~~~~~~~~~~~~gDGviVsTptGSTAY~lSAGG~ 228 (312)
+++|+++++.+ +|+.. ..+||||++|.+...+++.+++++++ ++ ++.+|+|||+|||||||||||++||||
T Consensus 103 i~~r~~L~~~v~~~~~~~~~~~alNev~i~~~~~~~~~~~~v~i~--~~---~~~~~~~DGlIVsTPtGSTAY~lSAGG- 176 (272)
T PRK02231 103 VEERFLLEAKIERNGKIIATSNALNEVVIHPAKIAHMIDFHVYID--DK---FAFSQRSDGLIISTPTGSTAYSLSAGG- 176 (272)
T ss_pred EEEeeeEEEEEEECCeEeeeeEEEEEEEEecCCCCceEEEEEEEC--CE---EEEEEecCeEEEECCCcHHHHHhhCCC-
Confidence 99999999876 45432 35799999999988889999888885 44 578899999999999999999999999
Q ss_pred eecccccchhhhhhccCCccchhhhhhhccccCCceeeEEEee---ecceEEEcCcceEEEeecCCeEEEccCCCeeeee
Q 021432 229 IMPILSHDLQYMVREPISPAAATSSLIHGLVKSDQSMEAMWFC---KEGFVYIDGSHVFVSIQNGDVIEISSKAPALKVF 305 (312)
Q Consensus 229 v~Pi~~p~l~~~v~tPi~p~~l~~~~~~~vv~~~~~i~i~~~~---~~~~l~iDG~~~~~~l~~gd~v~I~~s~~~~~l~ 305 (312)
||++|+++++++||||||+++.||+ |++++++|+++... ..+.+++||+ ...++++||+|+|++|+.+++++
T Consensus 177 --PIv~P~~~~~~itPI~Phsl~~Rpi--Vl~~~~~I~i~~~~~~~~~~~l~~DG~-~~~~l~~~d~v~I~~s~~~~~lv 251 (272)
T PRK02231 177 --PILTPNLNAIALVPMFPHTLSSRPL--VIDGDSKISLRFAEYNTPQLEVSCDSQ-IALPFTPDDRVHVQKSPDKLRLL 251 (272)
T ss_pred --ceeCCCCCeEEEEeccccccCCCCE--EECCCCEEEEEEcCCCCccEEEEECCC-eEEEeCCCcEEEEEEcCCEEEEE
Confidence 9999999999999999999999998 99999999998643 2467999998 57899999999999999999999
Q ss_pred cCCCCCC
Q 021432 306 LPPNLVY 312 (312)
Q Consensus 306 ~~~~~~~ 312 (312)
..++++|
T Consensus 252 ~~~~~~f 258 (272)
T PRK02231 252 HLKNYNY 258 (272)
T ss_pred EcCCCCH
Confidence 9988776
No 11
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=100.00 E-value=5.1e-56 Score=416.43 Aligned_cols=267 Identities=23% Similarity=0.326 Sum_probs=215.8
Q ss_pred cccccccccccCCCcccccchhHHHhhhhhhhhhhhhHHHHHHhhhcCCcceeecccccCCCccccccEEEEEcCCcceE
Q 021432 10 LKPFDVYTVRQSNGISHITNPLILQHLENRCKVHKDAINFCQDILSKKPIEWEPVFRNNLSRPIRNVDLVVTVGGDGTLL 89 (312)
Q Consensus 10 ~k~~~i~~n~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~Dlvi~lGGDGT~L 89 (312)
||+++++.|.. +..+.....++.+||++++....-.... ...+..... ......+ ..+++|++|++|||||+|
T Consensus 5 ~~~v~iv~~~~-~~~~~e~~~~i~~~L~~~g~~v~v~~~~-~~~~~~~~~--~~~~~~~---~~~~~d~vi~~GGDGt~l 77 (291)
T PRK02155 5 FKTVALIGRYQ-TPGIAEPLESLAAFLAKRGFEVVFEADT-ARNIGLTGY--PALTPEE---IGARADLAVVLGGDGTML 77 (291)
T ss_pred CCEEEEEecCC-CHHHHHHHHHHHHHHHHCCCEEEEecch-hhhcCcccc--cccChhH---hccCCCEEEEECCcHHHH
Confidence 45677777776 6677777888999999887532110010 111111000 0000011 123689999999999999
Q ss_pred eecccC-CCCcceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhcCccccCccceEEEEe--cCcc
Q 021432 90 QAGHLI-DDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILEGKTVPSNLSRILIRV--NSKS 166 (312)
Q Consensus 90 ~a~~~~-~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~g~~~~~~~~rl~~~~--~g~~ 166 (312)
+++|.+ ..++|++|||+| ++|||++++++++++.|+++++|+|.+++|+++++.+ +++.
T Consensus 78 ~~~~~~~~~~~pilGIn~G------------------~lGFL~~~~~~~~~~~l~~~~~g~~~i~~r~~L~~~v~~~~~~ 139 (291)
T PRK02155 78 GIGRQLAPYGVPLIGINHG------------------RLGFITDIPLDDMQETLPPMLAGNYEEEERMLLEARVVRDGEP 139 (291)
T ss_pred HHHHHhcCCCCCEEEEcCC------------------CccccccCCHHHHHHHHHHHHcCCceEEEeEEEEEEEEECCeE
Confidence 999864 568999999999 8999999999999999999999999999999999875 5544
Q ss_pred c-CcccccchhhhcCCccccceeEEEEecCCCCCCCCcccccCCeeeeecccchHHHHhcCCeeecccccchhhhhhccC
Q 021432 167 L-PTFALNDILIAHPCPAMVSRFSFKIKSDGMPCSPLVNCRSSGLRVSTAAGSSAAMLSAGGFIMPILSHDLQYMVREPI 245 (312)
Q Consensus 167 ~-~~~ALNDv~I~~~~~~~~~~~~~~v~~~~~~~~~~~~~~gDGviVsTptGSTAY~lSAGG~v~Pi~~p~l~~~v~tPi 245 (312)
. ..+||||++|.+..++++.+++++++ ++ ++.+|+|||+|||||||||||++|||| ||++|+++++++|||
T Consensus 140 ~~~~~AlNev~v~~~~~~~~~~~~v~i~--~~---~~~~~~gDGlIVsTPtGSTAYslSaGG---PIv~p~~~~~~ltPI 211 (291)
T PRK02155 140 IFHALAFNDVVVNRSGFSGMVELRVSVD--GR---FMYNQRSDGLIVATPTGSTAYALSAGG---PILHPQLPGWVLVPI 211 (291)
T ss_pred EEeeeeeeheeeccCCCCceEEEEEEEC--CE---EEEEEecCeEEEECCCchhhhhhhcCC---cccCCCCCeEEEEec
Confidence 3 35799999999998888999888885 44 578899999999999999999999999 999999999999999
Q ss_pred CccchhhhhhhccccCCceeeEEEee-ecceEEEcCcceEEEeecCCeEEEccCCCeeeeecCCCCCC
Q 021432 246 SPAAATSSLIHGLVKSDQSMEAMWFC-KEGFVYIDGSHVFVSIQNGDVIEISSKAPALKVFLPPNLVY 312 (312)
Q Consensus 246 ~p~~l~~~~~~~vv~~~~~i~i~~~~-~~~~l~iDG~~~~~~l~~gd~v~I~~s~~~~~l~~~~~~~~ 312 (312)
|||+++.||+ |++++++|+++... +++.+++||+ ....+++||+|.|+.++..++++.+.+.+|
T Consensus 212 ~p~~l~~rpi--Vl~~~~~i~i~~~~~~~~~l~~DG~-~~~~l~~~d~i~i~~s~~~~~~~~~~~~~f 276 (291)
T PRK02155 212 APHTLSNRPI--VLPDDSEVAIQIVGGRDVSVNFDMQ-SLTSLELGDRIEVRRSPHTVRFLHPVGYSY 276 (291)
T ss_pred CcCccCCCCE--EECCCCEEEEEEcCCCcEEEEEcCC-cceeCCCCCEEEEEECCCeEEEEecCCCCH
Confidence 9999999988 89999999987643 4568999997 578999999999999999999999888776
No 12
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase
Probab=100.00 E-value=1.3e-55 Score=432.65 Aligned_cols=269 Identities=19% Similarity=0.266 Sum_probs=212.7
Q ss_pred cccccccccccCCCcccccchhHHHhhhh-hhhh-hhhhHHHHHHhhhc----CCc-c-eeecccccCCCccccccEEEE
Q 021432 10 LKPFDVYTVRQSNGISHITNPLILQHLEN-RCKV-HKDAINFCQDILSK----KPI-E-WEPVFRNNLSRPIRNVDLVVT 81 (312)
Q Consensus 10 ~k~~~i~~n~~~~~~~~~~~~~~~~~l~~-~~~~-~~~~~~~~~~~l~~----~~~-~-~~~~~~~~l~~~~~~~Dlvi~ 81 (312)
+|+++|++|.. +..+...+.++..||++ ++.. ..+ ......+.. .+. . |.. ...+.....++|+||+
T Consensus 194 p~~VgIV~n~~-k~~a~el~~~I~~~L~~~~gi~V~ve--~~~a~~l~~~~~~~~~~~~~~~--~~~~~~l~~~~DlVIs 268 (508)
T PLN02935 194 PQTVLIITKPN-STSVRVLCAEMVRWLREQKGLNIYVE--PRVKKELLSESSYFNFVQTWED--EKEILLLHTKVDLVIT 268 (508)
T ss_pred CCEEEEEecCC-CHHHHHHHHHHHHHHHhcCCCEEEEe--chhhhhhccccccccccccccc--cchhhhcccCCCEEEE
Confidence 55677888776 67777788899999984 5432 211 111111110 010 0 000 0111111246899999
Q ss_pred EcCCcceEeecccC-CCCcceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhcCccccCccceEEE
Q 021432 82 VGGDGTLLQAGHLI-DDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILEGKTVPSNLSRILI 160 (312)
Q Consensus 82 lGGDGT~L~a~~~~-~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~g~~~~~~~~rl~~ 160 (312)
||||||||+|+|.+ ...+||+|||+| ++|||++++++++++.|+++++|+|.+++|++|++
T Consensus 269 iGGDGTlL~Aar~~~~~~iPILGIN~G------------------~LGFLt~i~~~e~~~~Le~il~G~y~Ie~R~~L~~ 330 (508)
T PLN02935 269 LGGDGTVLWAASMFKGPVPPVVPFSMG------------------SLGFMTPFHSEQYRDCLDAILKGPISITLRHRLQC 330 (508)
T ss_pred ECCcHHHHHHHHHhccCCCcEEEEeCC------------------CcceecccCHHHHHHHHHHHHcCCceEEEEeEEEE
Confidence 99999999999865 457999999999 89999999999999999999999999999999998
Q ss_pred Eec--Ccc------cCcccccchhhhcCCccccceeEEEEecCCCCCCCCcccccCCeeeeecccchHHHHhcCCeeecc
Q 021432 161 RVN--SKS------LPTFALNDILIAHPCPAMVSRFSFKIKSDGMPCSPLVNCRSSGLRVSTAAGSSAAMLSAGGFIMPI 232 (312)
Q Consensus 161 ~~~--g~~------~~~~ALNDv~I~~~~~~~~~~~~~~v~~~~~~~~~~~~~~gDGviVsTptGSTAY~lSAGG~v~Pi 232 (312)
.+. ++. ..++||||++|.+...+++.+++++++ ++ ++.+|+||||||||||||||||||||| ||
T Consensus 331 ~v~~~~~~~~~~~~~~~~ALNEvvI~rg~~~~~i~l~V~Id--g~---~v~~~rgDGLIVSTPTGSTAYsLSAGG---PI 402 (508)
T PLN02935 331 HIIRDAAKNEYETEEPILVLNEVTIDRGISSFLTNLECYCD--NS---FVTCVQGDGLILSTTSGSTAYSLAAGG---SM 402 (508)
T ss_pred EEEcCCceecccccccceeccceEEecCCCceEEEEEEEEC--CE---eEEEEECCcEEEecCccHHHHHHhcCC---cc
Confidence 752 321 135799999999988888888888885 44 678899999999999999999999999 99
Q ss_pred cccchhhhhhccCCccchhhhhhhccccCCceeeEEEee---ecceEEEcCcceEEEeecCCeEEEccCCCeeeeecCCC
Q 021432 233 LSHDLQYMVREPISPAAATSSLIHGLVKSDQSMEAMWFC---KEGFVYIDGSHVFVSIQNGDVIEISSKAPALKVFLPPN 309 (312)
Q Consensus 233 ~~p~l~~~v~tPi~p~~l~~~~~~~vv~~~~~i~i~~~~---~~~~l~iDG~~~~~~l~~gd~v~I~~s~~~~~l~~~~~ 309 (312)
++|++++|++||||||+++.||+ |++++.+|+|+... ..+.+++||+ ....|.+||+|.|++++.+++++...+
T Consensus 403 V~P~l~~ivlTPIcPHsLs~RPI--Vlp~~s~I~I~v~~~~~~~a~lsiDGq-~~~~L~~GD~V~I~kS~~~v~lV~l~~ 479 (508)
T PLN02935 403 VHPQVPGILFTPICPHSLSFRPL--ILPEYVTIRVQVPFNSRGQAWASFDGK-DRKQLSAGDALVCSMAPWPVPTACQVE 479 (508)
T ss_pred cCCCCCeEEEEecCCCcCCCCCe--EECCCCEEEEEEccCCCCceEEEEcCC-cceecCCCCEEEEEECCCceEEEeeCC
Confidence 99999999999999999999998 99999999998642 3467999998 578999999999999999999887744
Q ss_pred --CCC
Q 021432 310 --LVY 312 (312)
Q Consensus 310 --~~~ 312 (312)
++|
T Consensus 480 ~~~~F 484 (508)
T PLN02935 480 STNDF 484 (508)
T ss_pred CCCCH
Confidence 555
No 13
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=100.00 E-value=1.2e-55 Score=414.44 Aligned_cols=267 Identities=27% Similarity=0.357 Sum_probs=216.5
Q ss_pred cccccccccccCCCcccccchhHHHhhhhhhhhhhhhHHHHHHhhhcCCcceeecccccCCCccccccEEEEEcCCcceE
Q 021432 10 LKPFDVYTVRQSNGISHITNPLILQHLENRCKVHKDAINFCQDILSKKPIEWEPVFRNNLSRPIRNVDLVVTVGGDGTLL 89 (312)
Q Consensus 10 ~k~~~i~~n~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~Dlvi~lGGDGT~L 89 (312)
|+++++++|.. +.++...++++.+||++++....-. +...+.+...... ......+ ..++|+||++|||||+|
T Consensus 4 ~~~v~iv~~~~-k~~a~e~~~~i~~~L~~~giev~v~-~~~~~~~~~~~~~--~~~~~~~---~~~~d~vi~~GGDGt~l 76 (295)
T PRK01231 4 FRNIGLIGRLG-SSSVVETLRRLKDFLLDRGLEVILD-EETAEVLPGHGLQ--TVSRKLL---GEVCDLVIVVGGDGSLL 76 (295)
T ss_pred CCEEEEEecCC-CHHHHHHHHHHHHHHHHCCCEEEEe-cchhhhcCccccc--ccchhhc---ccCCCEEEEEeCcHHHH
Confidence 55677777766 7777778889999998887532110 1111111111111 0111111 23689999999999999
Q ss_pred eecccC-CCCcceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhcCccccCccceEEEEe--cCcc
Q 021432 90 QAGHLI-DDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILEGKTVPSNLSRILIRV--NSKS 166 (312)
Q Consensus 90 ~a~~~~-~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~g~~~~~~~~rl~~~~--~g~~ 166 (312)
+++|.+ ..++|++|||+| ++|||+++++++++++++++++|+|.+++|+++++.+ +|+.
T Consensus 77 ~~~~~~~~~~~Pvlgin~G------------------~lGFl~~~~~~~~~~~l~~~~~g~~~i~~r~~L~~~v~~~~~~ 138 (295)
T PRK01231 77 GAARALARHNVPVLGINRG------------------RLGFLTDIRPDELEFKLAEVLDGHYQEEERFLLEAEVRRGGEV 138 (295)
T ss_pred HHHHHhcCCCCCEEEEeCC------------------cccccccCCHHHHHHHHHHHHcCCceEEEEEEEEEEEEECCcE
Confidence 999865 468999999999 8999999999999999999999999999999999875 3443
Q ss_pred c-CcccccchhhhcCCccccceeEEEEecCCCCCCCCcccccCCeeeeecccchHHHHhcCCeeecccccchhhhhhccC
Q 021432 167 L-PTFALNDILIAHPCPAMVSRFSFKIKSDGMPCSPLVNCRSSGLRVSTAAGSSAAMLSAGGFIMPILSHDLQYMVREPI 245 (312)
Q Consensus 167 ~-~~~ALNDv~I~~~~~~~~~~~~~~v~~~~~~~~~~~~~~gDGviVsTptGSTAY~lSAGG~v~Pi~~p~l~~~v~tPi 245 (312)
. ..+||||++|.+..++++.+++++++ ++ ++.+|+|||+|||||||||||+||||| ||++|+++++++|||
T Consensus 139 ~~~~~ALNevvi~~~~~~~~~~~~v~id--~~---~~~~~~~DGlivsTptGSTAY~lSAGG---pIv~p~~~~~~itPI 210 (295)
T PRK01231 139 IGQGDALNDVVLHPGKSTRMIEFELYID--GQ---FVCSQRSDGLIVSTPTGSTAYALSGGG---PIMHPKLDAIVLVPM 210 (295)
T ss_pred EeeeeEEEEEEEccCCCCcEEEEEEEEC--CE---EEEEEEcceEEEeCCCCchhhhhhcCC---ceecCCCCeEEEEec
Confidence 2 45799999999988889999998885 44 578899999999999999999999999 999999999999999
Q ss_pred CccchhhhhhhccccCCceeeEEEee---ecceEEEcCcceEEEeecCCeEEEccCCCeeeeecCCCCCC
Q 021432 246 SPAAATSSLIHGLVKSDQSMEAMWFC---KEGFVYIDGSHVFVSIQNGDVIEISSKAPALKVFLPPNLVY 312 (312)
Q Consensus 246 ~p~~l~~~~~~~vv~~~~~i~i~~~~---~~~~l~iDG~~~~~~l~~gd~v~I~~s~~~~~l~~~~~~~~ 312 (312)
|||+++.||+ |++++++|+++... .++.+++||+ ..+.+++|++|.|+.++..++++.+.+.+|
T Consensus 211 ~ph~l~~rpi--Vl~~~~~I~i~~~~~~~~~~~l~~DG~-~~~~l~~g~~i~i~~s~~~~~l~~~~~~~f 277 (295)
T PRK01231 211 FPHTLSSRPI--VVDGNSEIKIVISKDNRTYPRVSCDGQ-NSVTLAPGDTVTIRKKPQKLRLIHPLDYNY 277 (295)
T ss_pred CCCccCCCCE--EECCCCEEEEEEccCCCCceEEEeCCC-ceEecCCCCEEEEEECCCeEEEEEcCCCCH
Confidence 9999999998 89988899998642 3467899998 579999999999999999999999888776
No 14
>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=100.00 E-value=3.5e-55 Score=408.20 Aligned_cols=261 Identities=22% Similarity=0.331 Sum_probs=213.0
Q ss_pred ccccccccCCCcccccchhHHHhhhhhhhhhhhhHHHHHHhhhcCCcceeecccccCCCccccccEEEEEcCCcceEeec
Q 021432 13 FDVYTVRQSNGISHITNPLILQHLENRCKVHKDAINFCQDILSKKPIEWEPVFRNNLSRPIRNVDLVVTVGGDGTLLQAG 92 (312)
Q Consensus 13 ~~i~~n~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~Dlvi~lGGDGT~L~a~ 92 (312)
++++.|.. +..+...++++.+||++++....-... ....+.. +......... -.++|++|++|||||+|+++
T Consensus 3 v~iv~~~~-k~~~~~~~~~I~~~L~~~g~~v~v~~~-~~~~~~~----~~~~~~~~~~--~~~~d~vi~iGGDGTlL~a~ 74 (277)
T PRK03708 3 FGIVARRD-KEEALKLAYRVYDFLKVSGYEVVVDSE-TYEHLPE----FSEEDVLPLE--EMDVDFIIAIGGDGTILRIE 74 (277)
T ss_pred EEEEecCC-CHHHHHHHHHHHHHHHHCCCEEEEecc-hhhhcCc----cccccccccc--ccCCCEEEEEeCcHHHHHHH
Confidence 66777765 677777889999999988863221000 0100100 0000000111 13689999999999999999
Q ss_pred ccCCCCcceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhcCccccCccceEEEEecCcccCcccc
Q 021432 93 HLIDDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILEGKTVPSNLSRILIRVNSKSLPTFAL 172 (312)
Q Consensus 93 ~~~~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~g~~~~~~~~rl~~~~~g~~~~~~AL 172 (312)
|....++|++|||+| ++|||++++++++.++++++++|+|.+++|+++++.++|+. ..+||
T Consensus 75 ~~~~~~~pi~gIn~G------------------~lGFl~~~~~~~~~~~l~~i~~g~~~~~~r~~l~~~~~~~~-~~~al 135 (277)
T PRK03708 75 HKTKKDIPILGINMG------------------TLGFLTEVEPEETFFALSRLLEGDYFIDERIKLRVYINGEN-VPDAL 135 (277)
T ss_pred HhcCCCCeEEEEeCC------------------CCCccccCCHHHHHHHHHHHHcCCceEEEeEEEEEEECCeE-eEEEe
Confidence 955568999999999 78999999999999999999999999999999999888765 36799
Q ss_pred cchhhhcCCccccceeEEEEecCCCCCCCCcccccCCeeeeecccchHHHHhcCCeeecccccchhhhhhccCCccchhh
Q 021432 173 NDILIAHPCPAMVSRFSFKIKSDGMPCSPLVNCRSSGLRVSTAAGSSAAMLSAGGFIMPILSHDLQYMVREPISPAAATS 252 (312)
Q Consensus 173 NDv~I~~~~~~~~~~~~~~v~~~~~~~~~~~~~~gDGviVsTptGSTAY~lSAGG~v~Pi~~p~l~~~v~tPi~p~~l~~ 252 (312)
||++|.+..++++.+++++++ ++ .+.+|+|||+|||||||||||++|||| ||++|+++++++||||||+++.
T Consensus 136 Ndv~v~~~~~~~~~~~~v~id--g~---~~~~~~gDGvIvsTptGSTAY~lSaGG---pIv~p~~~~~~vtPi~p~~l~~ 207 (277)
T PRK03708 136 NEVVILTGIPGKIIHLKYYVD--GE---LADEVRADGLIISTPTGSTAYAMSAGG---PFVDPRLDAILIAPLCPFKLSS 207 (277)
T ss_pred eeEEEecCCCCcEEEEEEEEC--CE---EEEEEecCEEEEeCCCchHHHHhhCCC---cccCCCCCeEEEEecccccCCC
Confidence 999999988889999898885 44 578899999999999999999999999 9999999999999999999999
Q ss_pred hhhhccccCCceeeEEEee--ecceEEEcCcceEEEeecCCeEEEccCCCeeeeecCCCCCC
Q 021432 253 SLIHGLVKSDQSMEAMWFC--KEGFVYIDGSHVFVSIQNGDVIEISSKAPALKVFLPPNLVY 312 (312)
Q Consensus 253 ~~~~~vv~~~~~i~i~~~~--~~~~l~iDG~~~~~~l~~gd~v~I~~s~~~~~l~~~~~~~~ 312 (312)
||+ |++++.+|+++... .+..+++||+ ....+++|++|.|+.+++.++++... .+|
T Consensus 208 rpl--V~~~~~~i~l~~~~~~~~~~l~~DG~-~~~~l~~~~~v~i~~s~~~~~~~~~~-~~f 265 (277)
T PRK03708 208 RPM--VVPSSSRIDVKLLRTGREIILVIDGQ-YYEELPPDTEITIKKSPRKTKFVRFS-KEI 265 (277)
T ss_pred CCE--EECCCCEEEEEEecCCCcEEEEECCC-eeEecCCCCEEEEEECCCeEEEEecC-CcH
Confidence 998 89999999998643 4567899998 57889999999999999999998877 454
No 15
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=100.00 E-value=5.8e-55 Score=403.86 Aligned_cols=238 Identities=19% Similarity=0.237 Sum_probs=197.1
Q ss_pred ccccccccCCCcccccchhHHHhhhhhhhhhhhhHHHHHHhhhcCCcceeecccccCCCccccccEEEEEcCCcceEeec
Q 021432 13 FDVYTVRQSNGISHITNPLILQHLENRCKVHKDAINFCQDILSKKPIEWEPVFRNNLSRPIRNVDLVVTVGGDGTLLQAG 92 (312)
Q Consensus 13 ~~i~~n~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~Dlvi~lGGDGT~L~a~ 92 (312)
+++++| . ++++...+.++.+||+.++... . .+++|++|++|||||||+|+
T Consensus 3 i~Ii~~-~-~~~~~~~~~~l~~~l~~~g~~~------------------~----------~~~~Dlvi~iGGDGT~L~a~ 52 (265)
T PRK04885 3 VAIISN-G-DPKSKRVASKLKKYLKDFGFIL------------------D----------EKNPDIVISVGGDGTLLSAF 52 (265)
T ss_pred EEEEeC-C-CHHHHHHHHHHHHHHHHcCCcc------------------C----------CcCCCEEEEECCcHHHHHHH
Confidence 666766 3 5666667777777777665321 0 13589999999999999999
Q ss_pred ccCC---CCcceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhcCccccCccceEEEEe--cCcc-
Q 021432 93 HLID---DSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILEGKTVPSNLSRILIRV--NSKS- 166 (312)
Q Consensus 93 ~~~~---~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~g~~~~~~~~rl~~~~--~g~~- 166 (312)
|.+. .++|++|||+| ++|||++++++++++.++++++|+|.+++|+++++.+ +++.
T Consensus 53 ~~~~~~~~~iPilGIN~G------------------~lGFL~~~~~~~~~~~l~~i~~g~y~i~~r~~L~~~v~~~~~~~ 114 (265)
T PRK04885 53 HRYENQLDKVRFVGVHTG------------------HLGFYTDWRPFEVDKLVIALAKDPGQVVSYPLLEVKITYEDGEK 114 (265)
T ss_pred HHhcccCCCCeEEEEeCC------------------CceecccCCHHHHHHHHHHHHcCCceEEEEeeEEEEEEeCCCcE
Confidence 8653 48999999999 8999999999999999999999999999999999875 3322
Q ss_pred cCcccccchhhhcCCccccceeEEEEecCCCCCCCCcccccCCeeeeecccchHHHHhcCCeeecccccchhhhhhccCC
Q 021432 167 LPTFALNDILIAHPCPAMVSRFSFKIKSDGMPCSPLVNCRSSGLRVSTAAGSSAAMLSAGGFIMPILSHDLQYMVREPIS 246 (312)
Q Consensus 167 ~~~~ALNDv~I~~~~~~~~~~~~~~v~~~~~~~~~~~~~~gDGviVsTptGSTAY~lSAGG~v~Pi~~p~l~~~v~tPi~ 246 (312)
...+||||++|.+.. ++.+++++++ ++ ++.+|+|||+||||||||||||||||| ||++|+++++++||||
T Consensus 115 ~~~~alNev~i~~~~--~~~~~~v~id--~~---~~~~~~gDGlIVsTptGSTAYslSaGG---PIv~P~~~~~~ltPI~ 184 (265)
T PRK04885 115 EKYLALNEATIKRIE--GTLVADVYIN--GV---LFERFRGDGLCVSTPTGSTAYNKSLGG---AVLHPSIEALQLTEIA 184 (265)
T ss_pred eeeeeeeeeeeccCC--ceEEEEEEEC--CE---EEEEEEcCEEEEECCCChHHHHhhCCC---ceeCCCCCeEEEEeec
Confidence 235799999999864 5777888884 44 578999999999999999999999999 9999999999999999
Q ss_pred ccchh-----hhhhhccccCCceeeEEEee-ecceEEEcCcceEEEeecCCeEEEccCCCeeeeecCCCCCC
Q 021432 247 PAAAT-----SSLIHGLVKSDQSMEAMWFC-KEGFVYIDGSHVFVSIQNGDVIEISSKAPALKVFLPPNLVY 312 (312)
Q Consensus 247 p~~l~-----~~~~~~vv~~~~~i~i~~~~-~~~~l~iDG~~~~~~l~~gd~v~I~~s~~~~~l~~~~~~~~ 312 (312)
|.+.. .||+ |++++++|+++... .++.+++||+ . .++++||+|.|+++++.++++.+++++|
T Consensus 185 ~l~~r~~~~~~~pl--Vl~~~~~I~i~~~~~~~~~l~~DG~-~-~~l~~~d~i~i~~s~~~~~li~~~~~~f 252 (265)
T PRK04885 185 SINNRVFRTLGSPL--ILPKHHTITLKPVNDDDYQITVDHL-T-IKHKNVKSIEYRVANEKIRFARFRHFPF 252 (265)
T ss_pred cccccccccCCCCE--EECCCCEEEEEEcCCCcEEEEECCC-E-eecCCCCEEEEEECCceEEEEEcCCCCH
Confidence 74321 1266 88888999998633 4567899998 5 8999999999999999999999988876
No 16
>PRK00561 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=100.00 E-value=1.1e-53 Score=392.97 Aligned_cols=203 Identities=18% Similarity=0.239 Sum_probs=175.3
Q ss_pred ccccEEEEEcCCcceEeecccC-CCCcceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHH-HHHHHhcCccc
Q 021432 74 RNVDLVVTVGGDGTLLQAGHLI-DDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQ-LLDNILEGKTV 151 (312)
Q Consensus 74 ~~~Dlvi~lGGDGT~L~a~~~~-~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~-~l~~l~~g~~~ 151 (312)
+++|++|++|||||||+|+|.+ ..++|++|||+| ++|||++++++++++ .++++.+ |.
T Consensus 32 ~~~D~vi~iGGDGT~L~a~~~~~~~~iPilGIN~G------------------~lGFL~~~~~~~~~~~~~~~l~~--~~ 91 (259)
T PRK00561 32 DGADYLFVLGGDGFFVSTAANYNCAGCKVVGINTG------------------HLGFYTSFNETDLDQNFANKLDQ--LK 91 (259)
T ss_pred CCCCEEEEECCcHHHHHHHHHhcCCCCcEEEEecC------------------CCccccccCHHHHHHHHHHHHhh--CC
Confidence 4689999999999999999865 468999999999 899999999999999 7788866 55
Q ss_pred cCccceEEEEecCcccCcccccchhhhcCCccccceeEEEEecCCCCCCCCcccccCCeeeeecccchHHHHhcCCeeec
Q 021432 152 PSNLSRILIRVNSKSLPTFALNDILIAHPCPAMVSRFSFKIKSDGMPCSPLVNCRSSGLRVSTAAGSSAAMLSAGGFIMP 231 (312)
Q Consensus 152 ~~~~~rl~~~~~g~~~~~~ALNDv~I~~~~~~~~~~~~~~v~~~~~~~~~~~~~~gDGviVsTptGSTAY~lSAGG~v~P 231 (312)
+++|+++++.++++. .+||||++|.+.. +.++++++ |++ ++.+|+|||+||||||||||||||||| |
T Consensus 92 ~~~r~~L~~~~~~~~--~~AlNE~vi~~~~---~~~~~v~i--dg~---~~~~~~gDGlIVsTPtGSTAYslSAGG---P 158 (259)
T PRK00561 92 FTQIDLLEVQIDDQI--HLVLNELAVYTNT---AYPINIFI--DNE---FWEKYRGSGLLIGPRTGSTALAKSAKG---A 158 (259)
T ss_pred eEEEEEEEEEECCCe--eEEEEEEEEccCC---ceEEEEEE--CCE---EEEEEecCEEEEeCchHHHHHHHhCCC---C
Confidence 678889998887763 5899999998754 45667777 454 578999999999999999999999999 9
Q ss_pred ccccchhhhhhccCCccch-----hhhhhhccccCCceeeEEEee-----ecceEEEcCcceEEEeecCCeEEEccCCCe
Q 021432 232 ILSHDLQYMVREPISPAAA-----TSSLIHGLVKSDQSMEAMWFC-----KEGFVYIDGSHVFVSIQNGDVIEISSKAPA 301 (312)
Q Consensus 232 i~~p~l~~~v~tPi~p~~l-----~~~~~~~vv~~~~~i~i~~~~-----~~~~l~iDG~~~~~~l~~gd~v~I~~s~~~ 301 (312)
|++|+++++++||||||++ ..||+ |++++.+|+++... ..+.+++||+ ....+++||+|.|++++..
T Consensus 159 Iv~P~~~~~~itPI~Ph~~~~~~~~~rpl--Vl~~~~~I~i~~~~~~~~~~~~~l~~DG~-~~~~l~~~d~v~i~~s~~~ 235 (259)
T PRK00561 159 VIFPRIDVIQIIELNPLLHPNQTTIQSPI--ILPIDTKVEFEIKKAFDHDQFPRFYADGA-KLRLGNSDTTIEISLVRSQ 235 (259)
T ss_pred ccCCCCCeEEEEeeCCCCcccccccCCCe--EECCCCEEEEEEccCCCCCCcEEEEEcCC-eeecCCCCCEEEEEEcCcc
Confidence 9999999999999999973 35777 88889999998643 2457899998 5789999999999999999
Q ss_pred ee-eecCCCCCC
Q 021432 302 LK-VFLPPNLVY 312 (312)
Q Consensus 302 ~~-l~~~~~~~~ 312 (312)
++ ++++++++|
T Consensus 236 ~~~~v~~~~~~f 247 (259)
T PRK00561 236 AMFVASLKTRDF 247 (259)
T ss_pred ceEEEECCCCCH
Confidence 99 788888776
No 17
>PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=100.00 E-value=1.2e-52 Score=425.87 Aligned_cols=259 Identities=24% Similarity=0.378 Sum_probs=210.5
Q ss_pred ccccccccCCCcccccchhHHHhhhhhhhhhhhhHHHHHHhhhcCCcc-eeecccccCCCccccccEEEEEcCCcceEee
Q 021432 13 FDVYTVRQSNGISHITNPLILQHLENRCKVHKDAINFCQDILSKKPIE-WEPVFRNNLSRPIRNVDLVVTVGGDGTLLQA 91 (312)
Q Consensus 13 ~~i~~n~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~l~~~~~~~Dlvi~lGGDGT~L~a 91 (312)
+++++|.. +..+...+.++..||++++....-. ......+...... +. ......++|+||++|||||||++
T Consensus 293 i~iv~~~~-~~~~~~~~~~i~~~l~~~~~~v~~~-~~~~~~~~~~~~~~~~------~~~~~~~~dlvi~lGGDGT~L~a 364 (569)
T PRK14076 293 FGIVSRID-NEEAINLALKIIKYLDSKGIPYELE-SFLYNKLKNRLNEECN------LIDDIEEISHIISIGGDGTVLRA 364 (569)
T ss_pred EEEEcCCC-CHHHHHHHHHHHHHHHHCCCEEEEe-chhhhhhccccccccc------ccccccCCCEEEEECCcHHHHHH
Confidence 66777765 6777777788888888877522110 1111111110000 00 00112368999999999999999
Q ss_pred cccC-CCCcceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhcCccccCccceEEEEe--cCcc-c
Q 021432 92 GHLI-DDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILEGKTVPSNLSRILIRV--NSKS-L 167 (312)
Q Consensus 92 ~~~~-~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~g~~~~~~~~rl~~~~--~g~~-~ 167 (312)
+|.+ ..++||+|||+| ++|||++++++++++.|+++++|+|.+++|++|++.+ +++. .
T Consensus 365 a~~~~~~~~PilGin~G------------------~lGFL~~~~~~~~~~~l~~~~~g~~~i~~r~~L~~~v~~~~~~~~ 426 (569)
T PRK14076 365 SKLVNGEEIPIICINMG------------------TVGFLTEFSKEEIFKAIDSIISGEYEIEKRTKLSGFILKDGHQNI 426 (569)
T ss_pred HHHhcCCCCCEEEEcCC------------------CCCcCcccCHHHHHHHHHHHHcCCceEEEeEEEEEEEEECCccee
Confidence 9865 468999999999 8999999999999999999999999999999999875 3332 2
Q ss_pred CcccccchhhhcCCccccceeEEEEecCCCCCCCCcccccCCeeeeecccchHHHHhcCCeeecccccchhhhhhccCCc
Q 021432 168 PTFALNDILIAHPCPAMVSRFSFKIKSDGMPCSPLVNCRSSGLRVSTAAGSSAAMLSAGGFIMPILSHDLQYMVREPISP 247 (312)
Q Consensus 168 ~~~ALNDv~I~~~~~~~~~~~~~~v~~~~~~~~~~~~~~gDGviVsTptGSTAY~lSAGG~v~Pi~~p~l~~~v~tPi~p 247 (312)
..+||||++|.+..++++.+++++++ ++ ++.+|+|||+||||||||||||||||| ||++|+++++++|||||
T Consensus 427 ~~~alNdv~i~~~~~~~~~~~~v~i~--~~---~~~~~~~DGlivsTptGSTaYslSAGG---Piv~p~~~~~~~tPI~p 498 (569)
T PRK14076 427 LPSALNEVVITTKNPAKMLHFEVYVN--GE---LVEEVRADGIIISTPTGSTAYSLSAGG---PIVEPTVDGFIIVPICP 498 (569)
T ss_pred eeEEEEEEEEccCCCCceEEEEEEEC--CE---EEEEEECCEEEEeCCCchHHHHhhCCC---ceeCCCCCeEEEEeecc
Confidence 35799999999988889999888885 44 578899999999999999999999999 99999999999999999
Q ss_pred cchhhhhhhccccCCceeeEEEeeecceEEEcCcceEEEeecCCeEEEccCCCeeeeecCC
Q 021432 248 AAATSSLIHGLVKSDQSMEAMWFCKEGFVYIDGSHVFVSIQNGDVIEISSKAPALKVFLPP 308 (312)
Q Consensus 248 ~~l~~~~~~~vv~~~~~i~i~~~~~~~~l~iDG~~~~~~l~~gd~v~I~~s~~~~~l~~~~ 308 (312)
|+++.||+ |++++++|++++...++.+++||+ ...++++||+|.|++++..++++...
T Consensus 499 h~l~~rpl--V~~~~~~i~i~~~~~~~~l~~DG~-~~~~l~~gd~I~I~~s~~~~~~v~~~ 556 (569)
T PRK14076 499 FKLSSRPL--VVSANSEIKIKLLKKSALVVIDGS-IEFEAKKGDEIIFRKSDSYAYFVKGD 556 (569)
T ss_pred CCCCCCCE--EECCCCEEEEEEeCCcEEEEECCc-eeeecCCCCEEEEEECCceEEEEecc
Confidence 99999998 999999999987656778999998 57899999999999999999998754
No 18
>PLN02727 NAD kinase
Probab=100.00 E-value=1.2e-52 Score=430.47 Aligned_cols=266 Identities=20% Similarity=0.285 Sum_probs=207.1
Q ss_pred ccccccccCCCcccccchhHHHhhhhh-hhhhhhhHHHHHHhhhc-CCcce-eecccccCCCccccccEEEEEcCCcceE
Q 021432 13 FDVYTVRQSNGISHITNPLILQHLENR-CKVHKDAINFCQDILSK-KPIEW-EPVFRNNLSRPIRNVDLVVTVGGDGTLL 89 (312)
Q Consensus 13 ~~i~~n~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~l~~-~~~~~-~~~~~~~l~~~~~~~Dlvi~lGGDGT~L 89 (312)
++|+++.+ + .....+.++..||.++ +.... ........+.. .+... ......+.....+++|+||+||||||||
T Consensus 681 VgIV~K~~-~-ea~~~~~eL~~~L~~~~gi~V~-VE~~~a~~l~~~~~~~~~~~~~~~~~~el~~~~DLVIvLGGDGTlL 757 (986)
T PLN02727 681 VLLLKKLG-Q-ELMEEAKEVASFLYHQEKMNVL-VEPDVHDIFARIPGFGFVQTFYSQDTSDLHERVDFVACLGGDGVIL 757 (986)
T ss_pred EEEEcCCc-H-HHHHHHHHHHHHHHhCCCeEEE-EecchHHHhhccccccccceecccchhhcccCCCEEEEECCcHHHH
Confidence 45666554 2 5566778889999997 54211 11122222211 11100 0000011111224689999999999999
Q ss_pred eecccC-CCCcceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhcCcccc-----CccceEEEEe-
Q 021432 90 QAGHLI-DDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILEGKTVP-----SNLSRILIRV- 162 (312)
Q Consensus 90 ~a~~~~-~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~g~~~~-----~~~~rl~~~~- 162 (312)
+|+|.+ ...+||+|||+| ++|||++++++++.+.|+++++|+|.+ ++|+++++.+
T Consensus 758 rAar~~~~~~iPILGINlG------------------rLGFLTdi~~ee~~~~L~~Il~G~y~i~~~~ie~R~~L~~~V~ 819 (986)
T PLN02727 758 HASNLFRGAVPPVVSFNLG------------------SLGFLTSHYFEDFRQDLRQVIHGNNTLDGVYITLRMRLRCEIF 819 (986)
T ss_pred HHHHHhcCCCCCEEEEeCC------------------CccccccCCHHHHHHHHHHHHcCCccccccccceeeEEEEEEe
Confidence 999875 467999999999 899999999999999999999999965 6788888764
Q ss_pred -cCccc---CcccccchhhhcCCccccceeEEEEecCCCCCCCCcccccCCeeeeecccchHHHHhcCCeeecccccchh
Q 021432 163 -NSKSL---PTFALNDILIAHPCPAMVSRFSFKIKSDGMPCSPLVNCRSSGLRVSTAAGSSAAMLSAGGFIMPILSHDLQ 238 (312)
Q Consensus 163 -~g~~~---~~~ALNDv~I~~~~~~~~~~~~~~v~~~~~~~~~~~~~~gDGviVsTptGSTAY~lSAGG~v~Pi~~p~l~ 238 (312)
+|+.+ .++||||++|.+...++++.++++++ ++ ++.+|+|||||||||||||||+||||| ||++|+++
T Consensus 820 r~g~~i~~~~~~ALNEVVI~Rg~~~~mi~ieVyID--g~---~l~tyrgDGLIVSTPTGSTAYSLSAGG---PIVhP~v~ 891 (986)
T PLN02727 820 RNGKAMPGKVFDVLNEVVVDRGSNPYLSKIECYEH--DR---LITKVQGDGVIVATPTGSTAYSTAAGG---SMVHPNVP 891 (986)
T ss_pred cCCcccccccceEEEEEEEecCCCccEEEEEEEEC--CE---EeEEeecceEEEECCCchHHhHhhcCC---ceeCCCCC
Confidence 45432 25799999999987778888888884 54 688999999999999999999999999 99999999
Q ss_pred hhhhccCCccchhhhhhhccccCCceeeEEEee---ecceEEEcCcceEEEeecCCeEEEccCCCeeeeecCCCC
Q 021432 239 YMVREPISPAAATSSLIHGLVKSDQSMEAMWFC---KEGFVYIDGSHVFVSIQNGDVIEISSKAPALKVFLPPNL 310 (312)
Q Consensus 239 ~~v~tPi~p~~l~~~~~~~vv~~~~~i~i~~~~---~~~~l~iDG~~~~~~l~~gd~v~I~~s~~~~~l~~~~~~ 310 (312)
+|++||||||+++.||+ |++++.+|+|+... ..+.+++||+ ...+|.+||+|.|++++.+++++.+.+.
T Consensus 892 aIvITPIcPHSLs~RPI--VLp~ds~I~IkI~~~sr~~a~Ls~DGq-~~~~L~~GD~I~Ir~S~~~v~lVr~~~~ 963 (986)
T PLN02727 892 CMLFTPICPHSLSFRPV--ILPDSARLELKIPDDARSNAWVSFDGK-RRQQLSRGDSVRISMSQHPLPTVNKSDQ 963 (986)
T ss_pred eEEEEecCcccCCCCCE--EECCCCeEEEEEccCCCCceEEEECCC-eeeecCCCCEEEEEECCceEEEEEeCCC
Confidence 99999999999999998 89989999998643 2567899998 5789999999999999999999988765
No 19
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=100.00 E-value=8.9e-52 Score=381.55 Aligned_cols=202 Identities=21% Similarity=0.372 Sum_probs=182.3
Q ss_pred ccccEEEEEcCCcceEeecccCCCCcceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhcCccccC
Q 021432 74 RNVDLVVTVGGDGTLLQAGHLIDDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILEGKTVPS 153 (312)
Q Consensus 74 ~~~Dlvi~lGGDGT~L~a~~~~~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~g~~~~~ 153 (312)
.++|++|++|||||+|+|+|.+ ++|++|||+| ++|||+++++++++++++++++|+|.++
T Consensus 40 ~~~d~vi~iGGDGT~L~a~~~~--~~Pilgin~G------------------~lGfl~~~~~~~~~~~l~~~~~g~~~~~ 99 (256)
T PRK14075 40 VTADLIIVVGGDGTVLKAAKKV--GTPLVGFKAG------------------RLGFLSSYTLEEIDRFLEDLKNWNFREE 99 (256)
T ss_pred CCCCEEEEECCcHHHHHHHHHc--CCCEEEEeCC------------------CCccccccCHHHHHHHHHHHHcCCcEEE
Confidence 4789999999999999999977 7999999999 8999999999999999999999999999
Q ss_pred ccceEEEEecCcccCcccccchhhhcCCccccceeEEEEecCCCCCCCCcccccCCeeeeecccchHHHHhcCCeeeccc
Q 021432 154 NLSRILIRVNSKSLPTFALNDILIAHPCPAMVSRFSFKIKSDGMPCSPLVNCRSSGLRVSTAAGSSAAMLSAGGFIMPIL 233 (312)
Q Consensus 154 ~~~rl~~~~~g~~~~~~ALNDv~I~~~~~~~~~~~~~~v~~~~~~~~~~~~~~gDGviVsTptGSTAY~lSAGG~v~Pi~ 233 (312)
+|+++++.+++.. .+||||++|.+..++++.+++++++ ++ .+.+|+|||+||||||||||||+|||| |++
T Consensus 100 ~r~~l~~~~~~~~--~~alNev~i~~~~~~~~~~~~v~i~--~~---~~~~~~~DG~ivsTptGSTaY~lSaGG---piv 169 (256)
T PRK14075 100 KRWFLKIESELGN--HLALNDVTLERDPSQKMVEIEVSFE--DH---SSMWFFADGVVISTPTGSTAYSLSLGG---PII 169 (256)
T ss_pred EeeEEEEEEcCCc--EEEEEEEEEecCCCCcEEEEEEEEC--CE---EEEEEecCEEEEeCCCchHHHHhhCCC---cee
Confidence 9999999876443 5899999999988888889888885 43 467899999999999999999999999 999
Q ss_pred ccchhhhhhccCCccchhhhhhhccccCCceeeEEEeeecceEEEcCcceEEEeecCCeEEEccCCCeeeeecCCCCCC
Q 021432 234 SHDLQYMVREPISPAAATSSLIHGLVKSDQSMEAMWFCKEGFVYIDGSHVFVSIQNGDVIEISSKAPALKVFLPPNLVY 312 (312)
Q Consensus 234 ~p~l~~~v~tPi~p~~l~~~~~~~vv~~~~~i~i~~~~~~~~l~iDG~~~~~~l~~gd~v~I~~s~~~~~l~~~~~~~~ 312 (312)
+|+++++.++|+|||+++.||+ +++++++|+|+. .++..+.+||+. +..++.|+|+.+++.++++.+++++|
T Consensus 170 ~p~~~~l~ItPI~Ph~L~~rpi--Vlp~~~~I~I~~-~~~~~l~iDGe~----~~~~~~I~I~~s~~~l~li~~~~~~f 241 (256)
T PRK14075 170 LPNCEVFEITPIAPQFLATRSI--VIPSNEKVTVES-QRDINLIVDGVL----VGKTNRITVKKSRRYVRILRPKDYDF 241 (256)
T ss_pred CCCCCeEEeeeeehhhcCCCce--EcCCCCEEEEEE-CCceEEEECCCC----cCCCcEEEEEECCCEEEEEEcCCCCH
Confidence 9999999999999999998887 788888999975 346788999973 57889999999999999999988876
No 20
>COG0061 nadF NAD kinase [Coenzyme metabolism]
Probab=100.00 E-value=4.4e-52 Score=388.51 Aligned_cols=259 Identities=27% Similarity=0.345 Sum_probs=206.3
Q ss_pred ccccccccCCCcccccchhHHHhhhhhhhhhhhhHHHHHHhhhcCCcceeecccccCCCccccccEEEEEcCCcceEeec
Q 021432 13 FDVYTVRQSNGISHITNPLILQHLENRCKVHKDAINFCQDILSKKPIEWEPVFRNNLSRPIRNVDLVVTVGGDGTLLQAG 92 (312)
Q Consensus 13 ~~i~~n~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~Dlvi~lGGDGT~L~a~ 92 (312)
+++..+.. +.++...+..+..|++.++...... +...+.|... . ...+. ..+.+|+++++|||||+|+++
T Consensus 3 ~~i~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~l~~~-~-----~~~~~--~~~~~d~ivvlGGDGtlL~~~ 72 (281)
T COG0061 3 VGIVGRPD-KPEALKIAKRLYEFLKFKGVTVEVD-QELAEELKDF-A-----DYVDD--DEEKADLIVVLGGDGTLLRAA 72 (281)
T ss_pred EEEEecCC-cHHHHHHHHHHHHHHHhcCceEEEe-chhhhhcccc-c-----ccccc--cccCceEEEEeCCcHHHHHHH
Confidence 34444444 4445556677777887766532211 2222222211 0 01111 126799999999999999999
Q ss_pred ccC-CCCcceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhcCccccCccceEEEEecCc-ccCcc
Q 021432 93 HLI-DDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILEGKTVPSNLSRILIRVNSK-SLPTF 170 (312)
Q Consensus 93 ~~~-~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~g~~~~~~~~rl~~~~~g~-~~~~~ 170 (312)
+.. ..++|++|||.| ++|||+++++++++++++++.+|+|.+++|+++++.+.++ ....+
T Consensus 73 ~~~~~~~~pilgin~G------------------~lGFLt~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~v~~~~~~~~~ 134 (281)
T COG0061 73 RLLARLDIPVLGINLG------------------HLGFLTDFEPDELEKALDALLEGEYRIEERLLLEVSVNRGDIRRAL 134 (281)
T ss_pred HHhccCCCCEEEEeCC------------------CcccccccCHHHHHHHHHHHhcCceEEEEeEEEEEEEEeCCccccc
Confidence 865 456999999999 8999999999999999999999999999999999887544 44578
Q ss_pred cccchhhhcCCccccceeEEEEecCCCCCCCCcccccCCeeeeecccchHHHHhcCCeeecccccchhhhhhccCCccch
Q 021432 171 ALNDILIAHPCPAMVSRFSFKIKSDGMPCSPLVNCRSSGLRVSTAAGSSAAMLSAGGFIMPILSHDLQYMVREPISPAAA 250 (312)
Q Consensus 171 ALNDv~I~~~~~~~~~~~~~~v~~~~~~~~~~~~~~gDGviVsTptGSTAY~lSAGG~v~Pi~~p~l~~~v~tPi~p~~l 250 (312)
||||++|.+..++++..++++++ +. ++++++|||+||||||||||||+|||| ||++|+++++++||||||++
T Consensus 135 aLNEv~I~~~~~~~~~~~~v~id--~~---~~~~~r~DGliVsTPTGSTAY~lSAGG---PIv~P~l~ai~ltpi~p~~l 206 (281)
T COG0061 135 ALNEVVIHRGSPAKMIEFEVYID--DE---FFESFRGDGLIVSTPTGSTAYNLSAGG---PILHPGLDAIQLTPICPHSL 206 (281)
T ss_pred eeeEEEEecCCCCcEEEEEEEEC--CE---EEEEEecCEEEEEcCCcHHHHhhhcCC---CccCCCCCeEEEeecCCCcc
Confidence 99999999998888777777774 44 688999999999999999999999999 99999999999999999999
Q ss_pred hhhhhhccccCCceeeEEEe--e-ecceEEEcCcceEEEeecCCeEEEccCCCeeeeecCCCC
Q 021432 251 TSSLIHGLVKSDQSMEAMWF--C-KEGFVYIDGSHVFVSIQNGDVIEISSKAPALKVFLPPNL 310 (312)
Q Consensus 251 ~~~~~~~vv~~~~~i~i~~~--~-~~~~l~iDG~~~~~~l~~gd~v~I~~s~~~~~l~~~~~~ 310 (312)
+.||+ ++++..+++++.. . ..+.+++||+ ....+.++++|+|+.+..+++++.+.+.
T Consensus 207 ~~Rpi--v~p~~~~v~i~~~~~~~~~~~~~~Dg~-~~~~~~~~~~i~i~~s~~~~~~~~~~~~ 266 (281)
T COG0061 207 SFRPL--VLPSSSTVRIEVLLTPKRDAVVVVDGQ-ELLLINPGDRIEIRRSPYKARFIRLRSY 266 (281)
T ss_pred cCCCE--EECCCceEEEEEccCCCcceEEEEcCC-ceEecCCCCEEEEEECCCceeEEecCCc
Confidence 98887 8888888888754 2 2357889998 5789999999999999999999887655
No 21
>PRK02645 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=100.00 E-value=2.4e-52 Score=394.28 Aligned_cols=263 Identities=24% Similarity=0.326 Sum_probs=199.8
Q ss_pred cccccccccccCCCcccccchhHHHhhhhhhhhhhhhHHHHHHhhhcCCcceeecccccCCCccccccEEEEEcCCcceE
Q 021432 10 LKPFDVYTVRQSNGISHITNPLILQHLENRCKVHKDAINFCQDILSKKPIEWEPVFRNNLSRPIRNVDLVVTVGGDGTLL 89 (312)
Q Consensus 10 ~k~~~i~~n~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~Dlvi~lGGDGT~L 89 (312)
||++.+++|.. +..+.....++.+||++++....-.... .+ ..+.. .. .......+|++|++|||||+|
T Consensus 3 ~kkv~lI~n~~-~~~~~~~~~~i~~~L~~~g~~v~v~~~~-~~---~~~~~--~~----~~~~~~~~d~vi~~GGDGT~l 71 (305)
T PRK02645 3 LKQVIIAYKAG-SSQAKEAAERCAKQLEARGCKVLMGPSG-PK---DNPYP--VF----LASASELIDLAIVLGGDGTVL 71 (305)
T ss_pred cCEEEEEEeCC-CHHHHHHHHHHHHHHHHCCCEEEEecCc-hh---hcccc--ch----hhccccCcCEEEEECCcHHHH
Confidence 33445555544 4555556778888888777532100000 00 00100 00 011123689999999999999
Q ss_pred eecccC-CCCcceeeccCCCCchhHHhhhhhccccccccccchHHh--hhcHHHHHHHHhcCccccCccceEEEEe--cC
Q 021432 90 QAGHLI-DDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAAT--VNNFEQLLDNILEGKTVPSNLSRILIRV--NS 164 (312)
Q Consensus 90 ~a~~~~-~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~--~~~~~~~l~~l~~g~~~~~~~~rl~~~~--~g 164 (312)
++++.+ ..++|++|||+| +++|||+++. .++ +++++++++|+|.+++|++|++++ ++
T Consensus 72 ~~~~~~~~~~~pv~gin~~-----------------G~lGFL~~~~~~~~~-~~~l~~i~~g~~~i~~r~~L~~~~~~~~ 133 (305)
T PRK02645 72 AAARHLAPHDIPILSVNVG-----------------GHLGFLTHPRDLLQD-ESVWDRLQEDRYAIERRMMLQARVFEGD 133 (305)
T ss_pred HHHHHhccCCCCEEEEecC-----------------CcceEecCchhhcch-HHHHHHHHcCCceEEEeeEEEEEEEeCC
Confidence 999865 468999999994 2899999875 344 889999999999999999999886 33
Q ss_pred c------ccCcccccchhhhcCCccccce--eEEEEecCCCCCCCCcccccCCeeeeecccchHHHHhcCCeeecccccc
Q 021432 165 K------SLPTFALNDILIAHPCPAMVSR--FSFKIKSDGMPCSPLVNCRSSGLRVSTAAGSSAAMLSAGGFIMPILSHD 236 (312)
Q Consensus 165 ~------~~~~~ALNDv~I~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~gDGviVsTptGSTAY~lSAGG~v~Pi~~p~ 236 (312)
+ ....+||||++|.+..++++.. +++++ |++ ++.+|+||||||||||||||||||||| ||++|+
T Consensus 134 ~~~~~~~~~~~~AlNev~i~~~~~~~~~~~~~~v~i--d~~---~~~~~~gDGlIVsTPtGSTAYslSAGG---PIv~P~ 205 (305)
T PRK02645 134 RSNEEPVSESYYALNDFYLKPASEDRSPTCILELEI--DGE---VVDQYQGDGLIVSTPTGSTAYTMAAGG---PILHPG 205 (305)
T ss_pred cccccccccceEEEeeEEEeccCcccccceEEEEEE--CCE---EEEEEecCEEEEecCCChhhhhhhcCC---cccCCC
Confidence 2 1246799999999887667654 66666 555 578899999999999999999999999 999999
Q ss_pred hhhhhhccCCccchhhhhhhccccCCceeeEEEee---ecceEEEcCcceEEEeecCCeEEEccCCCeeeeecCCC-CCC
Q 021432 237 LQYMVREPISPAAATSSLIHGLVKSDQSMEAMWFC---KEGFVYIDGSHVFVSIQNGDVIEISSKAPALKVFLPPN-LVY 312 (312)
Q Consensus 237 l~~~v~tPi~p~~l~~~~~~~vv~~~~~i~i~~~~---~~~~l~iDG~~~~~~l~~gd~v~I~~s~~~~~l~~~~~-~~~ 312 (312)
++++++||||||+++.||+ |++++.+|+++... ..+.+++||+ ....+++|++|+|+.++.+++++...+ .+|
T Consensus 206 ~~~~~vtPi~ph~l~~rpl--Vlp~~~~i~i~~~~~~~~~~~l~~DG~-~~~~l~~~~~i~i~~s~~~~~~v~~~~~~~f 282 (305)
T PRK02645 206 IDAIIVTPICPMSLSSRPI--VIPPGSRVVIWPLGDYDLNIKLWKDGV-LATSIWPGQRCVIQKARHPAKFIILEESYSY 282 (305)
T ss_pred CCeEEEEecCcccccCCCE--EECCCCEEEEEEcCCCCCcEEEEECCC-cceecCCCCEEEEEECCCceEEEEeCCCCCH
Confidence 9999999999999999988 89988999997533 2357899998 578999999999999999999887544 344
No 22
>PF01513 NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Members of this family are ATP-NAD kinases 2.7.1.23 from EC. The enzymes catalyse the phosphorylation of NAD to NADP utilizing ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus.; GO: 0003951 NAD+ kinase activity, 0008152 metabolic process; PDB: 1U0T_B 1U0R_D 1Y3H_A 1Y3I_A 3AFO_B 1YT5_B 2AN1_A 2I2A_A 3V8P_A 2I1W_A ....
Probab=100.00 E-value=5e-52 Score=388.91 Aligned_cols=264 Identities=28% Similarity=0.414 Sum_probs=206.6
Q ss_pred ccccccccCCCcccccchhHHHhhhhh-hhhhhhhHHHHHHhhhcCCcceeec-----------ccccCC-CccccccEE
Q 021432 13 FDVYTVRQSNGISHITNPLILQHLENR-CKVHKDAINFCQDILSKKPIEWEPV-----------FRNNLS-RPIRNVDLV 79 (312)
Q Consensus 13 ~~i~~n~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~l~~~~~~~~~~-----------~~~~l~-~~~~~~Dlv 79 (312)
++++.|.. +.++...+.++.+||+.+ +.............+++...+.... ...... ...+++|++
T Consensus 2 Vgii~np~-~~~~~~~~~~~~~~L~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~i 80 (285)
T PF01513_consen 2 VGIIANPN-KPEAIELANELARWLLEKQGIEVLVEGSIAEDILEAIKKRYEVISVEKKLKTLDDTRNALEEMLEEGVDLI 80 (285)
T ss_dssp EEEEESSC-GHCCCHHHHHHHHHHHHTTTEEEEEEHHHHHSHCCCSHSCCCCCTTSHCCCCTCEEEECCHHHHCCCSSEE
T ss_pred EEEEEcCC-CHHHHHHHHHHHHHHHhCCCEEEEEChHHHHHHHHhccccccccccccccccccccchhhhhhcccCCCEE
Confidence 56677766 677788889999999999 4322111121222222211110000 001111 134789999
Q ss_pred EEEcCCcceEeecccCC-CCcceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhcCccccCccceE
Q 021432 80 VTVGGDGTLLQAGHLID-DSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILEGKTVPSNLSRI 158 (312)
Q Consensus 80 i~lGGDGT~L~a~~~~~-~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~g~~~~~~~~rl 158 (312)
|++|||||+|+++|.+. .++||+|||+| ++|||++++++++.++++++++|+|.+++|+++
T Consensus 81 i~lGGDGT~L~~~~~~~~~~~Pilgin~G------------------~lgfl~~~~~~~~~~~l~~~~~g~~~~~~r~~l 142 (285)
T PF01513_consen 81 IVLGGDGTFLRAARLFGDYDIPILGINTG------------------TLGFLTEFEPEDIEEALEKILAGEYSIEERMRL 142 (285)
T ss_dssp EEEESHHHHHHHHHHCTTST-EEEEEESS------------------SSTSSSSEEGCGHHHHHHHHHHTHCEEEEEEEE
T ss_pred EEECCCHHHHHHHHHhccCCCcEEeecCC------------------CccccccCCHHHHHHHHHHHhcCCeEEEEeeeE
Confidence 99999999999998765 48999999999 899999999999999999999999999999999
Q ss_pred EEEecCcc-----cCcccccchhhhcCCccccceeEEEEecCCCCCCCCcccccCCeeeeecccchHHHHhcCCeeeccc
Q 021432 159 LIRVNSKS-----LPTFALNDILIAHPCPAMVSRFSFKIKSDGMPCSPLVNCRSSGLRVSTAAGSSAAMLSAGGFIMPIL 233 (312)
Q Consensus 159 ~~~~~g~~-----~~~~ALNDv~I~~~~~~~~~~~~~~v~~~~~~~~~~~~~~gDGviVsTptGSTAY~lSAGG~v~Pi~ 233 (312)
++.+++.. ..++||||+++.+...+++.+++++++ +. ++.+|+|||+|||||||||||++|||| |++
T Consensus 143 ~~~~~~~~~~~~~~~~~alNei~i~~~~~~~~~~~~v~i~--~~---~~~~~~~dGlivsTptGSTay~lSaGG---piv 214 (285)
T PF01513_consen 143 EVSVDRKKGAEIALIDYALNEIVISRGRASRMIELEVFID--GE---FLETYRGDGLIVSTPTGSTAYSLSAGG---PIV 214 (285)
T ss_dssp EEEEEETTE-CEEEEEEESSEEEEEESSTSSEEEEEEEET--TE---EEEEEEESEEEEEETGGGGTHHHHTT-----EE
T ss_pred EEEEecCCccceeeeeeeecCeeEEcCCCccceEEEEEEC--CE---EEEEEEEeeeEEEecCCceEEEEecCc---cEe
Confidence 98764322 246899999999988888888888885 44 578899999999999999999999999 999
Q ss_pred ccchhhhhhccCCccchhhhhhhccccCCceeeEEEeeecceEEEcCcceEEEeecCCeEEEccCCCeeeeec
Q 021432 234 SHDLQYMVREPISPAAATSSLIHGLVKSDQSMEAMWFCKEGFVYIDGSHVFVSIQNGDVIEISSKAPALKVFL 306 (312)
Q Consensus 234 ~p~l~~~v~tPi~p~~l~~~~~~~vv~~~~~i~i~~~~~~~~l~iDG~~~~~~l~~gd~v~I~~s~~~~~l~~ 306 (312)
+|.++++++||||||++..||+ |++++++|++++...++.+++||+ ...++++||+++|+.+.++++++.
T Consensus 215 ~p~~~~~~~tpi~p~~~~~rpi--Vl~~~~~i~i~~~~~~~~~~~DG~-~~~~~~~~d~i~i~~s~~~~~~ir 284 (285)
T PF01513_consen 215 HPGLDVIILTPICPHSLSNRPI--VLPDDSEIEIKVERREAVLAIDGQ-REIELKPGDEIRIRKSPKPVKLIR 284 (285)
T ss_dssp -TTSSEEEEEEESESSTT-S-E--EEETTSEEEEEEESCEEEEEETTT-EEEEECTTEEEEEEEECCEEEEEE
T ss_pred ccCcceeEEEeccccccCCceE--EECCCCEEEEEEeCCCEEEEEECC-ceEEeCCCcEEEEEEcCCccEEEe
Confidence 9999999999999999999998 999999999987667788999998 689999999999999999998864
No 23
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed
Probab=100.00 E-value=4.2e-49 Score=360.17 Aligned_cols=204 Identities=22% Similarity=0.320 Sum_probs=168.3
Q ss_pred cccccEEEEEcCCcceEeecccC-CCCcceeeccCCCCchhHHhhhhhccccccccccchH-HhhhcHHHHHHHHhcCcc
Q 021432 73 IRNVDLVVTVGGDGTLLQAGHLI-DDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCA-ATVNNFEQLLDNILEGKT 150 (312)
Q Consensus 73 ~~~~Dlvi~lGGDGT~L~a~~~~-~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~-~~~~~~~~~l~~l~~g~~ 150 (312)
.+++|+||++|||||||+++|.+ +.++|++|||+| ++|||++ ++++++.+.++++..+.+
T Consensus 23 ~~~~Dlvi~iGGDGTlL~a~~~~~~~~~PvlGIN~G------------------~lGFL~~~~~~~e~~~~l~~~~~~~~ 84 (246)
T PRK04761 23 IEEADVIVALGGDGFMLQTLHRYMNSGKPVYGMNRG------------------SVGFLMNEYSEDDLLERIAAAEPTVL 84 (246)
T ss_pred cccCCEEEEECCCHHHHHHHHHhcCCCCeEEEEeCC------------------CCCcccCCCCHHHHHHHHHHhhcCcE
Confidence 45799999999999999999864 568999999999 8999996 889999999999887744
Q ss_pred ccCccceEEEEe-cCcccCcccccchhhhcCCccccceeEEEEecCCCCCCC-CcccccCCeeeeecccchHHHHhcCCe
Q 021432 151 VPSNLSRILIRV-NSKSLPTFALNDILIAHPCPAMVSRFSFKIKSDGMPCSP-LVNCRSSGLRVSTAAGSSAAMLSAGGF 228 (312)
Q Consensus 151 ~~~~~~rl~~~~-~g~~~~~~ALNDv~I~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~gDGviVsTptGSTAY~lSAGG~ 228 (312)
. .+ ++++.. +|+....+||||++|.+.. .++.+++++++ ++ . +.+|+|||+|||||||||||+|||||
T Consensus 85 ~--~l-~~~~~~~~~~~~~~~ALNev~i~~~~-~~~~~~~v~id--g~---~~~~~~~gDGlIVSTPtGSTAY~lSAGG- 154 (246)
T PRK04761 85 H--PL-RMTATDVSGEVHEALAINEVSLFRQT-RQAAKLRISID--GK---VRMEELVCDGVLVATPAGSTAYNLSAHG- 154 (246)
T ss_pred E--EE-EEEEEECCCcEeeeeeeeheeeecCC-CceEEEEEEEC--CE---EEEEEEecCeEEEeCCcCHHHHHhhCCC-
Confidence 2 22 223333 3443346899999999876 56778888885 43 3 67899999999999999999999999
Q ss_pred eecccccchhhhhhccCCccchh-hhhhhccccCCceeeEEEee---ecceEEEcCcceEEEeecCCeEEEccCCCe-ee
Q 021432 229 IMPILSHDLQYMVREPISPAAAT-SSLIHGLVKSDQSMEAMWFC---KEGFVYIDGSHVFVSIQNGDVIEISSKAPA-LK 303 (312)
Q Consensus 229 v~Pi~~p~l~~~v~tPi~p~~l~-~~~~~~vv~~~~~i~i~~~~---~~~~l~iDG~~~~~~l~~gd~v~I~~s~~~-~~ 303 (312)
||++|+++++++||||||++. .||+ |++++++|+++... ++..+++||++ ...+++|.|+++.+. .+
T Consensus 155 --PIv~P~~~~~~itPI~P~~~~~~Rpl--Vlp~~~~I~i~~~~~~~~~~~l~~DG~~----~~~~~~v~I~~s~~~~~~ 226 (246)
T PRK04761 155 --PILPLGSNLLALTPISPFRPRRWRGA--LLPNSATVRFDVLEPDKRPVSAVADNTE----VRDVVEVTIREDKDITVT 226 (246)
T ss_pred --cccCCCCCeEEEEeecccCCcCCccE--EECCCCEEEEEEecCCCCcEEEEEcCCC----cccCcEEEEEEcCCccEE
Confidence 999999999999999999875 6777 89999999997643 24578999974 245899999999876 89
Q ss_pred eecCCCCCC
Q 021432 304 VFLPPNLVY 312 (312)
Q Consensus 304 l~~~~~~~~ 312 (312)
++++++.+|
T Consensus 227 l~~~~~~~~ 235 (246)
T PRK04761 227 LLFDPGHSL 235 (246)
T ss_pred EEECCCCCH
Confidence 999888876
No 24
>KOG2178 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.6e-46 Score=353.26 Aligned_cols=203 Identities=25% Similarity=0.404 Sum_probs=176.7
Q ss_pred ccccccEEEEEcCCcceEeecccCCCC-cceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhcCcc
Q 021432 72 PIRNVDLVVTVGGDGTLLQAGHLIDDS-IPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILEGKT 150 (312)
Q Consensus 72 ~~~~~Dlvi~lGGDGT~L~a~~~~~~~-~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~g~~ 150 (312)
.-+..|+||+||||||+|+|+.+++.. .||+.++.| ++||||+++.+++++.+.++++|+.
T Consensus 165 ~~~~~D~iItLGGDGTvL~aS~LFq~~VPPV~sFslG------------------slGFLtpf~f~~f~~~l~~v~~~~~ 226 (409)
T KOG2178|consen 165 LPNRFDLIITLGGDGTVLYASSLFQRSVPPVLSFSLG------------------SLGFLTPFPFANFQEQLARVLNGRA 226 (409)
T ss_pred cccceeEEEEecCCccEEEehhhhcCCCCCeEEeecC------------------CccccccccHHHHHHHHHHHhcCcc
Confidence 446789999999999999999887755 679999999 8999999999999999999999999
Q ss_pred ccCccceEEEEec---Cccc-----CcccccchhhhcCCccccceeEEEEecCCCCCCCCcccccCCeeeeecccchHHH
Q 021432 151 VPSNLSRILIRVN---SKSL-----PTFALNDILIAHPCPAMVSRFSFKIKSDGMPCSPLVNCRSSGLRVSTAAGSSAAM 222 (312)
Q Consensus 151 ~~~~~~rl~~~~~---g~~~-----~~~ALNDv~I~~~~~~~~~~~~~~v~~~~~~~~~~~~~~gDGviVsTptGSTAY~ 222 (312)
.+..|+|+++.+. .... ..++||||+|.|+....++.++++++ ++ .+++..|||||||||||||||+
T Consensus 227 ~v~lR~RL~C~i~rk~~~~~~~~~~~~~vLNEvvIdRGpsP~ls~l~ly~d--~~---~iT~vq~DGliVaTPTGSTAYS 301 (409)
T KOG2178|consen 227 AVNLRMRLRCSLKRKDLAEKTHAASSHYVLNEVVIDRGPSPFLSNLDLYVD--DK---LITKVQGDGLIVATPTGSTAYS 301 (409)
T ss_pred eEeeeeeEEEEEEEecccccccccceEEEeeeEEEccCCCchhcceeEEec--Cc---EEEEEecceEEEecCCchhhhH
Confidence 8988999998752 1111 47899999999987777888888885 44 5788999999999999999999
Q ss_pred HhcCCeeecccccchhhhhhccCCccchhhhhhhccccCCceeeEEEee---ecceEEEcCcceEEEeecCCeEEEccCC
Q 021432 223 LSAGGFIMPILSHDLQYMVREPISPAAATSSLIHGLVKSDQSMEAMWFC---KEGFVYIDGSHVFVSIQNGDVIEISSKA 299 (312)
Q Consensus 223 lSAGG~v~Pi~~p~l~~~v~tPi~p~~l~~~~~~~vv~~~~~i~i~~~~---~~~~l~iDG~~~~~~l~~gd~v~I~~s~ 299 (312)
+|||| ++++|.+.+|.+||||||+|+.||+ +++...+++|++.. ..+.+.+||.+ ..++..||.+.|..+.
T Consensus 302 ~sAGG---SlvhP~vpAIlvTPICPhSLSFRPI--IlPds~~L~I~i~~dsR~~awvSfDG~~-r~El~~GD~i~I~tS~ 375 (409)
T KOG2178|consen 302 ASAGG---SLVHPSVPAILVTPICPHSLSFRPI--ILPDSSELRVEVPLDSRSTAWVSFDGRP-RQELSLGDYIDITTSR 375 (409)
T ss_pred hhcCC---ceecCCCCeEEEeccCCCcccccce--EccCccEEEEEeCccccccceEEecCcc-hhhccCCceEEEEecc
Confidence 99999 9999999999999999999999997 77777888887632 35679999985 6899999999999987
Q ss_pred Ceee
Q 021432 300 PALK 303 (312)
Q Consensus 300 ~~~~ 303 (312)
.++-
T Consensus 376 ypfP 379 (409)
T KOG2178|consen 376 YPFP 379 (409)
T ss_pred CCCc
Confidence 6654
No 25
>KOG4180 consensus Predicted kinase [General function prediction only]
Probab=100.00 E-value=8.1e-37 Score=281.51 Aligned_cols=244 Identities=37% Similarity=0.525 Sum_probs=203.9
Q ss_pred hhHHHhhhhh----------hhhhhhhHHHHHHhhhcCCcceeecccccCCCccccccEEEEEcCCcceEeecc-cCCCC
Q 021432 30 PLILQHLENR----------CKVHKDAINFCQDILSKKPIEWEPVFRNNLSRPIRNVDLVVTVGGDGTLLQAGH-LIDDS 98 (312)
Q Consensus 30 ~~~~~~l~~~----------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~Dlvi~lGGDGT~L~a~~-~~~~~ 98 (312)
.++.++|++| |++|+++++.|++.|++.|++|+.+.|+.+++.+.|+|+||++|||||||.|++ ..++.
T Consensus 50 dql~q~L~srgtdv~~ll~~hKvhkn~~~~~~~~l~k~giesklv~R~~lsq~i~waD~VisvGGDGTfL~Aasrv~~~~ 129 (395)
T KOG4180|consen 50 DQLLQYLESRGTDVGRLLSKHKVHKNAIKFCQEELSKAGIESKLVSRNDLSQPIRWADMVISVGGDGTFLLAASRVIDDS 129 (395)
T ss_pred HHHHHHHHhcCchHHHHHHHhHHHHHHHHHHHHHHhhCCcceeeeehhhccCcCchhhEEEEecCccceeehhhhhhccC
Confidence 5678899999 889999999999999999999999999999999999999999999999999986 67788
Q ss_pred cceeeccCCCCchhHHhhhhhccccccccccchHHh--hhcHHHHHHHHhcCccccCccceEEEEecC------------
Q 021432 99 IPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAAT--VNNFEQLLDNILEGKTVPSNLSRILIRVNS------------ 164 (312)
Q Consensus 99 ~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~--~~~~~~~l~~l~~g~~~~~~~~rl~~~~~g------------ 164 (312)
+||+|||++|. ++-|.||--. +++...++.++.+|+|+.-.|.|++.++.|
T Consensus 130 ~PViGvNtDP~---------------~Seg~lcL~~~~~~n~~~al~k~~sgnF~wv~r~rir~tv~g~~gip~p~dlh~ 194 (395)
T KOG4180|consen 130 KPVIGVNTDPT---------------GSEGHLCLPDKYPSNPAGALCKLTSGNFEWVLRQRIRGTVVGDDGIPDPIDLHD 194 (395)
T ss_pred CceeeecCCCC---------------cCcceEeccccCCCCcHHHHHHHHhccHHHhhhheeEEEEecCCCCCCchhhhh
Confidence 99999999997 5788888653 577889999999999998888888877643
Q ss_pred ---------------------------cccCcccccchhhhcCCccccceeEEEEecCCCCCCCCcccccCCeeeeeccc
Q 021432 165 ---------------------------KSLPTFALNDILIAHPCPAMVSRFSFKIKSDGMPCSPLVNCRSSGLRVSTAAG 217 (312)
Q Consensus 165 ---------------------------~~~~~~ALNDv~I~~~~~~~~~~~~~~v~~~~~~~~~~~~~~gDGviVsTptG 217 (312)
+.++..|||||+|..+.++++++|++.|+. . .+.+++++|+++||.||
T Consensus 195 ~q~s~nqr~sa~~i~~~~~s~sea~~~~~LpvlALNEVfIgE~lsarVS~y~i~idd-~----~~~KqKssgl~vctgTG 269 (395)
T KOG4180|consen 195 QQLSDNQRSSAKEIEETLLSHSEAVEIVALPVLALNEVFIGESLSARVSYYEISIDD-K----DGVKQKSSGLVVCTGTG 269 (395)
T ss_pred hhhccccccchhhHHHHHHhhhhhccccccchhhhcceeecCcccccceeEEEEecC-c----ccccccCCCeeEecCCC
Confidence 024567999999999999999999999973 3 35689999999999999
Q ss_pred chHHHHhcCC--------------------------------------eeecccccchhhhhhccCCccchhhhhhhccc
Q 021432 218 SSAAMLSAGG--------------------------------------FIMPILSHDLQYMVREPISPAAATSSLIHGLV 259 (312)
Q Consensus 218 STAY~lSAGG--------------------------------------~v~Pi~~p~l~~~v~tPi~p~~l~~~~~~~vv 259 (312)
||+|+++.+- .++-+.+|++.+-+++|||-..+.+...++.
T Consensus 270 stsw~~~iNria~q~v~d~l~~l~~~~~~~vp~~Re~ve~i~~~~nq~llF~PD~p~l~fSiRepi~n~~~~s~~~R~f- 348 (395)
T KOG4180|consen 270 STSWTFNINRIAEQAVGDLLMILLSRDNLQVPFMRELVEEISTAYNQHLLFKPDRPQLAFSIREPIFNATWPSTDPRGF- 348 (395)
T ss_pred cceEeecccHHHHHHHHHHHHHHHhcCcccchhhhhhhHHHHHHhhhcCccCCCCcchhhhhhhhhhccccCCCccccc-
Confidence 9999987742 2344567778888888888765543222222
Q ss_pred cCCceeeEEEeeecceEEEcCcceEEEeecCCeEEEcc
Q 021432 260 KSDQSMEAMWFCKEGFVYIDGSHVFVSIQNGDVIEISS 297 (312)
Q Consensus 260 ~~~~~i~i~~~~~~~~l~iDG~~~~~~l~~gd~v~I~~ 297 (312)
.++|.|+..+.++.+++||. ..++|..|....+..
T Consensus 349 --~~kI~iksrC~da~lVidG~-is~~fndga~a~mev 383 (395)
T KOG4180|consen 349 --ADKICIKSRCQDAHLVIDGG-ISIPFNDGALAVMEV 383 (395)
T ss_pred --ceeEEEecceeeeeEEEecc-eEeecCcchhheeee
Confidence 35789988889999999997 789999998776654
No 26
>COG1597 LCB5 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]
Probab=98.36 E-value=1.3e-06 Score=82.82 Aligned_cols=117 Identities=23% Similarity=0.263 Sum_probs=74.9
Q ss_pred cccccccccccC-CCcccccchhHHHhhhhhhhhhhhhHHHHHHhhhcCCcceeecccccCCCccccccEEEEEcCCcce
Q 021432 10 LKPFDVYTVRQS-NGISHITNPLILQHLENRCKVHKDAINFCQDILSKKPIEWEPVFRNNLSRPIRNVDLVVTVGGDGTL 88 (312)
Q Consensus 10 ~k~~~i~~n~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~Dlvi~lGGDGT~ 88 (312)
||++.+++|..+ +.......+++.+.|+.++..+....- ++.+-..+.. .++ .....|.||+.|||||+
T Consensus 2 ~~~~~~i~Np~sG~~~~~~~~~~~~~~l~~~g~~~~~~~t------~~~g~a~~~a--~~a--~~~~~D~via~GGDGTv 71 (301)
T COG1597 2 MKKALLIYNPTSGKGKAKKLLREVEELLEEAGHELSVRVT------EEAGDAIEIA--REA--AVEGYDTVIAAGGDGTV 71 (301)
T ss_pred CceEEEEEcccccccchhhHHHHHHHHHHhcCCeEEEEEe------ecCccHHHHH--HHH--HhcCCCEEEEecCcchH
Confidence 677788888876 566666667777777777763221000 0000000000 000 12368999999999999
Q ss_pred Eeecc-cCCCCcceeeccCCCCchhHHhhhhhccccccccccchHHhhh-cHHHHHHHHhcCccc
Q 021432 89 LQAGH-LIDDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVN-NFEQLLDNILEGKTV 151 (312)
Q Consensus 89 L~a~~-~~~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~-~~~~~l~~l~~g~~~ 151 (312)
=.++- ..+.+.|.|||=++++ .|.|+ |.+|. |. +++++++.+.+|+..
T Consensus 72 ~evingl~~~~~~~LgilP~GT--------~NdfA--r~Lgi-----p~~~~~~Al~~i~~g~~~ 121 (301)
T COG1597 72 NEVANGLAGTDDPPLGILPGGT--------ANDFA--RALGI-----PLDDIEAALELIKSGETR 121 (301)
T ss_pred HHHHHHHhcCCCCceEEecCCc--------hHHHH--HHcCC-----CchhHHHHHHHHHcCCeE
Confidence 98875 4454445488877654 68887 57876 66 599999999999754
No 27
>TIGR00147 lipid kinase, YegS/Rv2252/BmrU family. The E. coli member of this family, YegS has been purified and shown to have phosphatidylglycerol kinase activity. The member from M. tuberculosis, Rv2252, has diacylglycerol kinase activity. BmrU from B. subtilis is in an operon with multidrug efflux transporter Bmr, but is uncharacterized.
Probab=98.31 E-value=3.9e-07 Score=85.42 Aligned_cols=112 Identities=18% Similarity=0.245 Sum_probs=66.4
Q ss_pred cccccccccccC-CCcccccchhHHHhhhhhhhhhhh--hHH--HHHHhhhcCCcceeecccccCCCccccccEEEEEcC
Q 021432 10 LKPFDVYTVRQS-NGISHITNPLILQHLENRCKVHKD--AIN--FCQDILSKKPIEWEPVFRNNLSRPIRNVDLVVTVGG 84 (312)
Q Consensus 10 ~k~~~i~~n~~~-~~~~~~~~~~~~~~l~~~~~~~~~--~~~--~~~~~l~~~~~~~~~~~~~~l~~~~~~~Dlvi~lGG 84 (312)
||++.++.|..+ +.......+++..+|++++..+.. ... .....++ .. .-.++|++|++||
T Consensus 1 ~~~~~ii~Np~sg~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~~~~~~~~~-----------~~---~~~~~d~ivv~GG 66 (293)
T TIGR00147 1 MAEAPAILNPTAGKSNDNKPLREVIMLLREEGMEIHVRVTWEKGDAARYVE-----------EA---RKFGVDTVIAGGG 66 (293)
T ss_pred CceEEEEECCCccchhhHHHHHHHHHHHHHCCCEEEEEEecCcccHHHHHH-----------HH---HhcCCCEEEEECC
Confidence 577888888864 333344556666777666642210 000 0000000 00 0135799999999
Q ss_pred CcceEeecccC-C-CCcceee-ccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhcCccc
Q 021432 85 DGTLLQAGHLI-D-DSIPVLG-VNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILEGKTV 151 (312)
Q Consensus 85 DGT~L~a~~~~-~-~~~PilG-IN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~g~~~ 151 (312)
|||+..+++.+ . .+.|.+| |+.|. .|.|+ +.+|. +.+++++++.+.+|+..
T Consensus 67 DGTl~~v~~~l~~~~~~~~lgiiP~Gt---------~N~~a--~~l~i-----~~~~~~~~~~l~~~~~~ 120 (293)
T TIGR00147 67 DGTINEVVNALIQLDDIPALGILPLGT---------ANDFA--RSLGI-----PEDLDKAAKLVIAGDAR 120 (293)
T ss_pred CChHHHHHHHHhcCCCCCcEEEEcCcC---------HHHHH--HHcCC-----CCCHHHHHHHHHcCCce
Confidence 99999988643 3 3567788 88882 23333 12332 67888999999988753
No 28
>PRK00861 putative lipid kinase; Reviewed
Probab=98.16 E-value=8.4e-06 Score=76.86 Aligned_cols=62 Identities=34% Similarity=0.531 Sum_probs=45.1
Q ss_pred ccccEEEEEcCCcceEeeccc-CCCCcceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhcCccc
Q 021432 74 RNVDLVVTVGGDGTLLQAGHL-IDDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILEGKTV 151 (312)
Q Consensus 74 ~~~Dlvi~lGGDGT~L~a~~~-~~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~g~~~ 151 (312)
+++|+||++|||||+-.++.. ...++|+-=|-.| + .|.|+ |.+|. +.+++++++.+.+|...
T Consensus 56 ~~~d~vv~~GGDGTl~evv~~l~~~~~~lgviP~G-T--------gNdfA--r~lgi-----~~~~~~a~~~i~~g~~~ 118 (300)
T PRK00861 56 RGAELIIASGGDGTLSAVAGALIGTDIPLGIIPRG-T--------ANAFA--AALGI-----PDTIEEACRTILQGKTR 118 (300)
T ss_pred cCCCEEEEECChHHHHHHHHHHhcCCCcEEEEcCC-c--------hhHHH--HHcCC-----CCCHHHHHHHHHcCCcE
Confidence 457999999999999988754 4445554334444 3 57777 47776 66889999999988753
No 29
>PRK12361 hypothetical protein; Provisional
Probab=97.97 E-value=2.2e-05 Score=80.26 Aligned_cols=64 Identities=31% Similarity=0.505 Sum_probs=42.1
Q ss_pred ccccEEEEEcCCcceEeeccc-CCCCcceeeccCCCCchhHHhhhhhcccccccc-ccchHHhhhcHHHHHHHHhcCcc
Q 021432 74 RNVDLVVTVGGDGTLLQAGHL-IDDSIPVLGVNSDPTRGEEVDMLSNEFDASRSK-GYLCAATVNNFEQLLDNILEGKT 150 (312)
Q Consensus 74 ~~~Dlvi~lGGDGT~L~a~~~-~~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~-GfL~~~~~~~~~~~l~~l~~g~~ 150 (312)
++.|+||++|||||+-.++.. .+.++| +||=+.++ .|.|+ |.+ |+=.+ ..+.+++++.+.+|..
T Consensus 296 ~~~d~Viv~GGDGTl~ev~~~l~~~~~~-lgiiP~GT--------gNdfA--r~L~gi~~~--~~~~~~a~~~i~~g~~ 361 (547)
T PRK12361 296 AGADIVIACGGDGTVTEVASELVNTDIT-LGIIPLGT--------ANALS--HALFGLGSK--LIPVEQACDNIIQGHT 361 (547)
T ss_pred cCCCEEEEECCCcHHHHHHHHHhcCCCC-EEEecCCc--------hhHHH--HHhcCCCCC--CccHHHHHHHHHhCCC
Confidence 357999999999999888754 344455 55544433 57776 355 44110 1467888888888864
No 30
>PRK11914 diacylglycerol kinase; Reviewed
Probab=97.70 E-value=3.5e-05 Score=72.88 Aligned_cols=112 Identities=22% Similarity=0.258 Sum_probs=65.9
Q ss_pred cccccccccccC-CCcccccchhHHHhhhhhhhhhh--hh--HHHHHHhhhcCCcceeecccccCCCccccccEEEEEcC
Q 021432 10 LKPFDVYTVRQS-NGISHITNPLILQHLENRCKVHK--DA--INFCQDILSKKPIEWEPVFRNNLSRPIRNVDLVVTVGG 84 (312)
Q Consensus 10 ~k~~~i~~n~~~-~~~~~~~~~~~~~~l~~~~~~~~--~~--~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~Dlvi~lGG 84 (312)
||++.++.|..+ +..+.....++.+.|++++.... .. ......+.++ . ...++|+||++||
T Consensus 8 ~~~~~iI~NP~sG~g~~~~~~~~~~~~l~~~g~~~~~~~t~~~~~~~~~a~~-----------~---~~~~~d~vvv~GG 73 (306)
T PRK11914 8 IGKVTVLTNPLSGHGAAPHAAERAIARLHHRGVDVVEIVGTDAHDARHLVAA-----------A---LAKGTDALVVVGG 73 (306)
T ss_pred CceEEEEECCCCCCCcHHHHHHHHHHHHHHcCCeEEEEEeCCHHHHHHHHHH-----------H---HhcCCCEEEEECC
Confidence 467778888775 34434445566666666654211 00 0001111000 0 1135799999999
Q ss_pred CcceEeeccc-CCCCcceeeccCCCCchhHHhhhhhccccccccccchHHhh-hcHHHHHHHHhcCccc
Q 021432 85 DGTLLQAGHL-IDDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATV-NNFEQLLDNILEGKTV 151 (312)
Q Consensus 85 DGT~L~a~~~-~~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~-~~~~~~l~~l~~g~~~ 151 (312)
|||+=.++.. ...++|+-=|-.| + .|.|+ |.+|. + .+.+++++.+.+|...
T Consensus 74 DGTi~evv~~l~~~~~~lgiiP~G-T--------~NdfA--r~lg~-----~~~~~~~a~~~i~~g~~~ 126 (306)
T PRK11914 74 DGVISNALQVLAGTDIPLGIIPAG-T--------GNDHA--REFGI-----PTGDPEAAADVIVDGWTE 126 (306)
T ss_pred chHHHHHhHHhccCCCcEEEEeCC-C--------cchhH--HHcCC-----CCCCHHHHHHHHHcCCce
Confidence 9998888754 3445664444444 3 57777 46775 4 3688888989888754
No 31
>PRK13337 putative lipid kinase; Reviewed
Probab=97.55 E-value=5e-05 Score=71.82 Aligned_cols=62 Identities=37% Similarity=0.559 Sum_probs=43.9
Q ss_pred ccccEEEEEcCCcceEeeccc-CCC-CcceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhcCcc
Q 021432 74 RNVDLVVTVGGDGTLLQAGHL-IDD-SIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILEGKT 150 (312)
Q Consensus 74 ~~~Dlvi~lGGDGT~L~a~~~-~~~-~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~g~~ 150 (312)
+.+|+||++|||||+-.++.. .+. ..|-|||=++++ .|.|+ |.+|. +.+++++++.+.+|..
T Consensus 56 ~~~d~vvv~GGDGTl~~vv~gl~~~~~~~~lgiiP~GT--------~NdfA--r~lgi-----~~~~~~a~~~i~~g~~ 119 (304)
T PRK13337 56 RKFDLVIAAGGDGTLNEVVNGIAEKENRPKLGIIPVGT--------TNDFA--RALHV-----PRDIEKAADVIIEGHT 119 (304)
T ss_pred cCCCEEEEEcCCCHHHHHHHHHhhCCCCCcEEEECCcC--------HhHHH--HHcCC-----CCCHHHHHHHHHcCCe
Confidence 357999999999998777653 322 234566655544 57776 46775 5678889999988875
No 32
>PRK13055 putative lipid kinase; Reviewed
Probab=97.48 E-value=7.1e-05 Score=71.87 Aligned_cols=63 Identities=24% Similarity=0.385 Sum_probs=44.7
Q ss_pred ccccEEEEEcCCcceEeeccc-CC-CCcceeeccCCCCchhHHhhhhhccccccccccchHHhhh-cHHHHHHHHhcCcc
Q 021432 74 RNVDLVVTVGGDGTLLQAGHL-ID-DSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVN-NFEQLLDNILEGKT 150 (312)
Q Consensus 74 ~~~Dlvi~lGGDGT~L~a~~~-~~-~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~-~~~~~l~~l~~g~~ 150 (312)
.++|+||++|||||+-.++.. .. ...|.|||=++++ .|.|+ |.+|. +. +++++++.+.+|+.
T Consensus 58 ~~~d~vvv~GGDGTl~evvngl~~~~~~~~LgiiP~GT--------gNdfA--r~Lgi-----~~~~~~~a~~~l~~g~~ 122 (334)
T PRK13055 58 AGFDLIIAAGGDGTINEVVNGIAPLEKRPKMAIIPAGT--------TNDYA--RALKI-----PRDNPVEAAKVILKNQT 122 (334)
T ss_pred cCCCEEEEECCCCHHHHHHHHHhhcCCCCcEEEECCCc--------hhHHH--HHcCC-----CCcCHHHHHHHHHcCCc
Confidence 357999999999998887753 32 2235567655544 67777 47775 55 68889999988875
Q ss_pred c
Q 021432 151 V 151 (312)
Q Consensus 151 ~ 151 (312)
.
T Consensus 123 ~ 123 (334)
T PRK13055 123 I 123 (334)
T ss_pred E
Confidence 3
No 33
>PRK13054 lipid kinase; Reviewed
Probab=97.47 E-value=6.6e-05 Score=70.86 Aligned_cols=62 Identities=27% Similarity=0.401 Sum_probs=43.7
Q ss_pred ccccEEEEEcCCcceEeeccc-CCC--C-cceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhcCc
Q 021432 74 RNVDLVVTVGGDGTLLQAGHL-IDD--S-IPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILEGK 149 (312)
Q Consensus 74 ~~~Dlvi~lGGDGT~L~a~~~-~~~--~-~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~g~ 149 (312)
.++|.||++|||||+-.++.. .+. + .|.|||=++++ .|.|+ |.+|. +.+++++++.+.+|.
T Consensus 55 ~~~d~vvv~GGDGTl~evv~~l~~~~~~~~~~lgiiP~GT--------gNdfa--r~lgi-----~~~~~~a~~~i~~g~ 119 (300)
T PRK13054 55 LGVATVIAGGGDGTINEVATALAQLEGDARPALGILPLGT--------ANDFA--TAAGI-----PLEPDKALKLAIEGR 119 (300)
T ss_pred cCCCEEEEECCccHHHHHHHHHHhhccCCCCcEEEEeCCc--------HhHHH--HhcCC-----CCCHHHHHHHHHhCC
Confidence 357999999999998887753 321 2 24466555544 57777 47775 567888999998887
Q ss_pred c
Q 021432 150 T 150 (312)
Q Consensus 150 ~ 150 (312)
.
T Consensus 120 ~ 120 (300)
T PRK13054 120 A 120 (300)
T ss_pred c
Confidence 5
No 34
>PRK13057 putative lipid kinase; Reviewed
Probab=97.37 E-value=0.00012 Score=68.62 Aligned_cols=62 Identities=29% Similarity=0.422 Sum_probs=47.3
Q ss_pred ccccEEEEEcCCcceEeeccc-CCCCcceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhcCccc
Q 021432 74 RNVDLVVTVGGDGTLLQAGHL-IDDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILEGKTV 151 (312)
Q Consensus 74 ~~~Dlvi~lGGDGT~L~a~~~-~~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~g~~~ 151 (312)
.++|.||++|||||+-.++.. ...++|+.-|..|. .|.|+ |.+|. +.+++++++.+.+|...
T Consensus 49 ~~~d~iiv~GGDGTv~~v~~~l~~~~~~lgiiP~GT---------~Ndfa--r~Lg~-----~~~~~~a~~~i~~~~~~ 111 (287)
T PRK13057 49 DGVDLVIVGGGDGTLNAAAPALVETGLPLGILPLGT---------ANDLA--RTLGI-----PLDLEAAARVIATGQVR 111 (287)
T ss_pred cCCCEEEEECchHHHHHHHHHHhcCCCcEEEECCCC---------ccHHH--HHcCC-----CCCHHHHHHHHHcCCeE
Confidence 457999999999999988754 44567876677763 57776 47776 56788999999988753
No 35
>PRK13059 putative lipid kinase; Reviewed
Probab=97.30 E-value=0.00017 Score=68.04 Aligned_cols=62 Identities=23% Similarity=0.408 Sum_probs=43.5
Q ss_pred ccccEEEEEcCCcceEeeccc-C--CCCcceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhcCcc
Q 021432 74 RNVDLVVTVGGDGTLLQAGHL-I--DDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILEGKT 150 (312)
Q Consensus 74 ~~~Dlvi~lGGDGT~L~a~~~-~--~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~g~~ 150 (312)
+.+|.||++|||||+=.++.. . +.++| |||=+.++ .|.|+ |.+|. +.+..++++.+.+|+.
T Consensus 55 ~~~d~vi~~GGDGTv~evv~gl~~~~~~~~-lgviP~GT--------gNdfA--r~lgi-----~~~~~~a~~~i~~g~~ 118 (295)
T PRK13059 55 ESYKYILIAGGDGTVDNVVNAMKKLNIDLP-IGILPVGT--------ANDFA--KFLGM-----PTDIGEACEQILKSKP 118 (295)
T ss_pred cCCCEEEEECCccHHHHHHHHHHhcCCCCc-EEEECCCC--------HhHHH--HHhCC-----CCCHHHHHHHHHhCCc
Confidence 357999999999998887753 3 23455 45433333 57777 47775 6778899999998874
Q ss_pred c
Q 021432 151 V 151 (312)
Q Consensus 151 ~ 151 (312)
.
T Consensus 119 ~ 119 (295)
T PRK13059 119 K 119 (295)
T ss_pred E
Confidence 3
No 36
>COG3199 Predicted inorganic polyphosphate/ATP-NAD kinase [General function prediction only]
Probab=97.16 E-value=0.00026 Score=67.60 Aligned_cols=68 Identities=29% Similarity=0.523 Sum_probs=51.8
Q ss_pred cccEEEEEcCCcceEeecccCCCCcceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhcCccccCc
Q 021432 75 NVDLVVTVGGDGTLLQAGHLIDDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILEGKTVPSN 154 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~~~~~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~g~~~~~~ 154 (312)
.+|+++..|||||.--++...+.++|+|||.+|. |++ .|. -.++|++....+..+++|++..++
T Consensus 100 gVdlIvfaGGDGTarDVa~av~~~vPvLGipaGv----------k~~-----Sgv-fA~~P~~aa~l~~~~lkg~~r~~~ 163 (355)
T COG3199 100 GVDLIVFAGGDGTARDVAEAVGADVPVLGIPAGV----------KNY-----SGV-FALSPEDAARLLGAFLKGNARLEN 163 (355)
T ss_pred CceEEEEeCCCccHHHHHhhccCCCceEeecccc----------cee-----ccc-cccChHHHHHHHHHHhcccccccc
Confidence 6999999999999877776667789999999993 333 231 134578888899999999887766
Q ss_pred cceE
Q 021432 155 LSRI 158 (312)
Q Consensus 155 ~~rl 158 (312)
+.-+
T Consensus 164 r~V~ 167 (355)
T COG3199 164 REVV 167 (355)
T ss_pred cccc
Confidence 4433
No 37
>PLN02958 diacylglycerol kinase/D-erythro-sphingosine kinase
Probab=96.81 E-value=0.001 Score=67.05 Aligned_cols=62 Identities=24% Similarity=0.385 Sum_probs=41.0
Q ss_pred ccccEEEEEcCCcceEeeccc-CCC-------CcceeeccCCCCchhHHhhhhhcccccccc----ccchHHhhhcHHHH
Q 021432 74 RNVDLVVTVGGDGTLLQAGHL-IDD-------SIPVLGVNSDPTRGEEVDMLSNEFDASRSK----GYLCAATVNNFEQL 141 (312)
Q Consensus 74 ~~~Dlvi~lGGDGT~L~a~~~-~~~-------~~PilGIN~G~~~~~~~~~~~~~~~~~~~~----GfL~~~~~~~~~~~ 141 (312)
.++|.||++|||||+=.++.- +.. .+| |||=+.++ .|.|+ |++ |. +.+..++
T Consensus 167 ~~~D~VV~vGGDGTlnEVvNGL~~~~~~~~~~~~p-LGiIPaGT--------gNdfA--rsL~~~~gi-----p~~~~~A 230 (481)
T PLN02958 167 SKYDGIVCVSGDGILVEVVNGLLEREDWKTAIKLP-IGMVPAGT--------GNGMA--KSLLDSVGE-----PCSATNA 230 (481)
T ss_pred cCCCEEEEEcCCCHHHHHHHHHhhCccccccccCc-eEEecCcC--------cchhh--hhhccccCC-----CcCHHHH
Confidence 468999999999998776643 221 345 45433333 46666 355 43 5677888
Q ss_pred HHHHhcCccc
Q 021432 142 LDNILEGKTV 151 (312)
Q Consensus 142 l~~l~~g~~~ 151 (312)
+..|..|...
T Consensus 231 ~~~I~~g~~~ 240 (481)
T PLN02958 231 VLAIIRGHKC 240 (481)
T ss_pred HHHHHcCCce
Confidence 8889998754
No 38
>TIGR03702 lip_kinase_YegS lipid kinase YegS. Members of this protein family are designated YegS, an apparent lipid kinase family in the Proteobacteria. Bakali, et al. report phosphatidylglycerol kinase activity for the member from Escherichia coli, but refrain from calling that activity synonymous with its biological role. Note that a broader, subfamily-type model (TIGR00147), includes this family but also multiple paralogs in some species and varied functions.
Probab=96.34 E-value=0.0034 Score=59.06 Aligned_cols=63 Identities=30% Similarity=0.410 Sum_probs=41.9
Q ss_pred ccccEEEEEcCCcceEeeccc-CC--CCc-ceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhcCc
Q 021432 74 RNVDLVVTVGGDGTLLQAGHL-ID--DSI-PVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILEGK 149 (312)
Q Consensus 74 ~~~Dlvi~lGGDGT~L~a~~~-~~--~~~-PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~g~ 149 (312)
.++|.||++|||||+-.++.. .+ ... |-|||=+.++ .|.|+ |.+|. +.+.+++++.+++|.
T Consensus 51 ~~~d~vv~~GGDGTi~ev~ngl~~~~~~~~~~lgiiP~GT--------gNdfA--r~l~i-----p~~~~~a~~~i~~g~ 115 (293)
T TIGR03702 51 LGVSTVIAGGGDGTLREVATALAQIRDDAAPALGLLPLGT--------ANDFA--TAAGI-----PLEPAKALKLALNGA 115 (293)
T ss_pred cCCCEEEEEcCChHHHHHHHHHHhhCCCCCCcEEEEcCCc--------hhHHH--HhcCC-----CCCHHHHHHHHHhCC
Confidence 457999999999998877643 32 122 2345433322 47777 46765 667888999998886
Q ss_pred cc
Q 021432 150 TV 151 (312)
Q Consensus 150 ~~ 151 (312)
..
T Consensus 116 ~~ 117 (293)
T TIGR03702 116 AQ 117 (293)
T ss_pred ce
Confidence 53
No 39
>PF00781 DAGK_cat: Diacylglycerol kinase catalytic domain; InterPro: IPR001206 The DAG-kinase catalytic domain or DAGKc domain is present in mammalian lipid kinases, such as diacylglycerol (DAG), ceramide and sphingosine kinases, as well as in related bacterial proteins [, ]. Eukaryotic DAG-kinase (2.7.1.107 from EC) catalyses the phosphorylation of DAG to phosphatidic acid, thus modulating the balance between the two signaling lipids. At least ten different isoforms have been identified in mammals, which form 5 groups characterised by different functional domains, such as the calcium-binding EF hand (see PDOC00018 from PROSITEDOC), PH (see PDOC50003 from PROSITEDOC), SAM (see PDOC50105 from PROSITEDOC) , DAG/PE-binding C1 domain (see PDOC00379 from PROSITEDOC) and ankyrin repeats (see PDOC50088 from PROSITEDOC) []. In bacteria, an integral membrane DAG kinase forms a homotrimeric protein that lacks the DAGKc domain (see PDOC00820 from PROSITEDOC). In contrast, the bacterial yegS protein is a soluble cytosolic protein that contains the DAGKc domain in the N-terminal part. YegS is a lipid kinase with two structural domains, wherein the active site is located in the interdomain cleft, C-terminal to the DAGKc domain which forms an alpha/beta fold []. The tertiary structure resembles that of NAD kinases and contains a metal-binding site in the C-terminal region [, ]. This domain is usually associated with an accessory domain (see IPR000756 from INTERPRO).; GO: 0004143 diacylglycerol kinase activity, 0007205 activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway; PDB: 2JGR_A 2BON_A 3T5P_D 3S40_A 2P1R_A 2QV7_A 2QVL_A.
Probab=95.35 E-value=0.007 Score=49.86 Aligned_cols=43 Identities=35% Similarity=0.522 Sum_probs=25.9
Q ss_pred ccEEEEEcCCcceEeeccc-CCCC----cceeeccCCCCchhHHhhhhhcccccccccc
Q 021432 76 VDLVVTVGGDGTLLQAGHL-IDDS----IPVLGVNSDPTRGEEVDMLSNEFDASRSKGY 129 (312)
Q Consensus 76 ~Dlvi~lGGDGT~L~a~~~-~~~~----~PilGIN~G~~~~~~~~~~~~~~~~~~~~Gf 129 (312)
.|.||++|||||+-.++.. .... +|+.=|-+|. .|.|+ +++|+
T Consensus 55 ~~~ivv~GGDGTl~~vv~~l~~~~~~~~~~l~iiP~GT---------~N~~a--r~lg~ 102 (130)
T PF00781_consen 55 PDVIVVVGGDGTLNEVVNGLMGSDREDKPPLGIIPAGT---------GNDFA--RSLGI 102 (130)
T ss_dssp -SEEEEEESHHHHHHHHHHHCTSTSSS--EEEEEE-SS---------S-HHH--HHTT-
T ss_pred ccEEEEEcCccHHHHHHHHHhhcCCCccceEEEecCCC---------hhHHH--HHcCC
Confidence 3999999999999888753 3322 2554445552 46666 46766
No 40
>COG0205 PfkA 6-phosphofructokinase [Carbohydrate transport and metabolism]
Probab=95.10 E-value=0.014 Score=56.52 Aligned_cols=87 Identities=29% Similarity=0.428 Sum_probs=53.5
Q ss_pred ccccEEEEEcCCcceEeecccCCCC-cceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhcCcccc
Q 021432 74 RNVDLVVTVGGDGTLLQAGHLIDDS-IPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILEGKTVP 152 (312)
Q Consensus 74 ~~~Dlvi~lGGDGT~L~a~~~~~~~-~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~g~~~~ 152 (312)
.+.|.+|++|||||+-.|..+.+.. +|++|| +++ ++.-....+ -.+||.+..+. .-++++++. .+.
T Consensus 93 ~gId~LvvIGGDgS~~gA~~Lae~~~i~vVGv-PkT-----IDNDi~~td--~tiGfdTA~~~--~~eaid~l~---dta 159 (347)
T COG0205 93 LGIDALVVIGGDGSYTGAALLAEEGGIPVVGV-PKT-----IDNDISGTD--FTIGFDTALET--AVEAIDNLR---DTA 159 (347)
T ss_pred cCCCEEEEECCCChHHHHHHHHHhcCCcEEec-CCC-----ccCCCcccc--cCccHHHHHHH--HHHHHHHHH---HHH
Confidence 3678999999999999998776544 999999 332 222122222 27999999753 445566665 222
Q ss_pred CccceEE-EEecCcccCccccc
Q 021432 153 SNLSRIL-IRVNSKSLPTFALN 173 (312)
Q Consensus 153 ~~~~rl~-~~~~g~~~~~~ALN 173 (312)
..+.|.. +.+-|+...+.||+
T Consensus 160 ssh~r~~iveVMGR~aG~lAl~ 181 (347)
T COG0205 160 SSHERIFIVEVMGRHAGWLALA 181 (347)
T ss_pred hCcCCEEEEEecCcChhHHHHH
Confidence 3344544 34556654444443
No 41
>smart00046 DAGKc Diacylglycerol kinase catalytic domain (presumed). Diacylglycerol (DAG) is a second messenger that acts as a protein kinase C activator. DAG can be produced from the hydrolysis of phosphatidylinositol 4,5-bisphosphate (PIP2) by a phosphoinositide-specific phospholipase C and by the degradation of phosphatidylcholine (PC) by a phospholipase C or the concerted actions of phospholipase D and phosphatidate phosphohydrolase. This domain is presumed to be the catalytic domain. Bacterial homologues areknown.
Probab=94.41 E-value=0.019 Score=47.17 Aligned_cols=19 Identities=37% Similarity=0.478 Sum_probs=16.5
Q ss_pred cccEEEEEcCCcceEeecc
Q 021432 75 NVDLVVTVGGDGTLLQAGH 93 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~~ 93 (312)
..|.||++|||||+-.+..
T Consensus 49 ~~d~vvv~GGDGTi~~vvn 67 (124)
T smart00046 49 KFDRVLVCGGDGTVGWVLN 67 (124)
T ss_pred cCCEEEEEccccHHHHHHH
Confidence 4789999999999887764
No 42
>PLN02204 diacylglycerol kinase
Probab=91.73 E-value=0.077 Score=54.73 Aligned_cols=30 Identities=13% Similarity=0.209 Sum_probs=20.6
Q ss_pred cceEEEcCcceEEEeecCCeEEEccCCCeeeeecC
Q 021432 273 EGFVYIDGSHVFVSIQNGDVIEISSKAPALKVFLP 307 (312)
Q Consensus 273 ~~~l~iDG~~~~~~l~~gd~v~I~~s~~~~~l~~~ 307 (312)
+..+.+||+. + ....++++.....++|+.+
T Consensus 568 ~~~~niDGE~----~-~~~~v~v~V~~~al~lfa~ 597 (601)
T PLN02204 568 ESVWNLDGEI----F-QAHQLSAQVFRGLVNLFAS 597 (601)
T ss_pred CceEEeCCCc----C-CCccEEEEEEcCeeEEEec
Confidence 3457799962 2 2346888888888888764
No 43
>PRK14071 6-phosphofructokinase; Provisional
Probab=90.40 E-value=0.27 Score=47.99 Aligned_cols=62 Identities=26% Similarity=0.451 Sum_probs=42.0
Q ss_pred cccEEEEEcCCcceEeecccCCC-CcceeeccCCCCchhHHhhhhhcccc-ccccccchHHhhhcHHHHHHHHhc
Q 021432 75 NVDLVVTVGGDGTLLQAGHLIDD-SIPVLGVNSDPTRGEEVDMLSNEFDA-SRSKGYLCAATVNNFEQLLDNILE 147 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~~~~~~-~~PilGIN~G~~~~~~~~~~~~~~~~-~~~~GfL~~~~~~~~~~~l~~l~~ 147 (312)
+.|.+|++|||||+-.+.++.+. ++|++||-- +- -|.+.. ..++||-+.++. .-++++++..
T Consensus 107 ~Id~Li~IGGdgS~~~a~~L~~~~~i~vIgiPk-TI--------DNDl~~td~t~Gf~TA~~~--~~~~id~i~~ 170 (360)
T PRK14071 107 GLDALIGIGGDGSLAILRRLAQQGGINLVGIPK-TI--------DNDVGATEVSIGFDTAVNI--ATEALDRLHF 170 (360)
T ss_pred CCCEEEEECChhHHHHHHHHHHhcCCcEEEecc-cc--------cCCCcCcccCcChhHHHHH--HHHHHHHHHh
Confidence 67999999999998766555443 799999932 11 122211 248999999875 5557777754
No 44
>TIGR02483 PFK_mixed phosphofructokinase. Members of this family that are characterized, save one, are phosphofructokinases dependent on pyrophosphate (EC 2.7.1.90) rather than ATP (EC 2.7.1.11). The exception is one of three phosphofructokinases from Streptomyces coelicolor. Family members are both bacterial and archaeal.
Probab=90.38 E-value=0.22 Score=47.86 Aligned_cols=63 Identities=32% Similarity=0.544 Sum_probs=42.9
Q ss_pred ccccEEEEEcCCcceEeecccCCCCcceeeccCCCCchhHHhhhhhcccc-ccccccchHHhhhcHHHHHHHHhc
Q 021432 74 RNVDLVVTVGGDGTLLQAGHLIDDSIPVLGVNSDPTRGEEVDMLSNEFDA-SRSKGYLCAATVNNFEQLLDNILE 147 (312)
Q Consensus 74 ~~~Dlvi~lGGDGT~L~a~~~~~~~~PilGIN~G~~~~~~~~~~~~~~~~-~~~~GfL~~~~~~~~~~~l~~l~~ 147 (312)
.+.|.+|++|||||+-.|.++.+.++|++||-. +-+ |.+.- ..++||-+.++. +-+.++.+..
T Consensus 93 ~~Id~LivIGGdgS~~~a~~L~~~gi~vigiPk-TID--------NDl~gtd~tiGfdTA~~~--~~~~i~~i~~ 156 (324)
T TIGR02483 93 LGLDALIAIGGDGTLGIARRLADKGLPVVGVPK-TID--------NDLEATDYTFGFDTAVEI--ATEALDRLHT 156 (324)
T ss_pred cCCCEEEEECCchHHHHHHHHHhcCCCEEeecc-ccC--------CCCcCCccCcCHHHHHHH--HHHHHHHHHH
Confidence 367999999999999777666555799999942 111 11111 137999998764 5566666654
No 45
>TIGR02482 PFKA_ATP 6-phosphofructokinase. 6-phosphofructokinase (EC 2.7.1.11) catalyzes the addition of phosphate from ATP to fructose 6-phosphate to give fructose 1,6-bisphosphate. This represents a key control step in glycolysis. This model hits bacterial ATP-dependent 6-phosphofructokinases which lack a beta-hairpin loop present in TIGR02483 family members. TIGR02483 contains members that are ATP-dependent as well as members that are pyrophosphate-dependent. TIGR02477 represents the pyrophosphate-dependent phosphofructokinase, diphosphate--fructose-6-phosphate 1-phosphotransferase (EC 2.7.1.90).
Probab=90.11 E-value=0.16 Score=48.30 Aligned_cols=84 Identities=25% Similarity=0.460 Sum_probs=50.0
Q ss_pred cccEEEEEcCCcceEeecccCC-CCcceeeccCCCCchhHHhhhhhcccc-ccccccchHHhhhcHHHHHHHHhcCcccc
Q 021432 75 NVDLVVTVGGDGTLLQAGHLID-DSIPVLGVNSDPTRGEEVDMLSNEFDA-SRSKGYLCAATVNNFEQLLDNILEGKTVP 152 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~~~~~-~~~PilGIN~G~~~~~~~~~~~~~~~~-~~~~GfL~~~~~~~~~~~l~~l~~g~~~~ 152 (312)
+.|.+|++|||||+-.+.++.+ .++|++||-. + +-|.... ..++||-+.++ .+-++++++..- ..-
T Consensus 91 ~Id~Li~IGGdgs~~~a~~L~e~~~i~vigiPk-T--------IDNDl~~td~s~GfdTA~~--~~~~~i~~i~~t-a~s 158 (301)
T TIGR02482 91 GIEGLVVIGGDGSYTGAQKLYEEGGIPVIGLPG-T--------IDNDIPGTDYTIGFDTALN--TIIDAVDKIRDT-ATS 158 (301)
T ss_pred CCCEEEEeCCchHHHHHHHHHHhhCCCEEeecc-c--------ccCCCcCcccCcChhHHHH--HHHHHHHHHHHH-hhc
Confidence 6799999999999988877655 5799999943 1 1122111 24899988865 234555556321 111
Q ss_pred CccceE-EEEecCcccCcccc
Q 021432 153 SNLSRI-LIRVNSKSLPTFAL 172 (312)
Q Consensus 153 ~~~~rl-~~~~~g~~~~~~AL 172 (312)
. .|+ -+.+-|+..-+.||
T Consensus 159 ~--~rv~ivEvMGR~~G~lAl 177 (301)
T TIGR02482 159 H--ERAFVIEVMGRHAGDLAL 177 (301)
T ss_pred C--CCEEEEEeCCCCHHHHHH
Confidence 2 233 34555654444454
No 46
>cd00763 Bacterial_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include bacterial ATP-dependent phosphofructokinases. These are allosrterically regulated homotetramers; the subunits are of about 320 amino acids.
Probab=88.77 E-value=0.12 Score=49.54 Aligned_cols=62 Identities=24% Similarity=0.486 Sum_probs=41.3
Q ss_pred ccccEEEEEcCCcceEeecccCCCCcceeeccCCCCchhHHhhhhhcccc-ccccccchHHhhhcHHHHHHHHh
Q 021432 74 RNVDLVVTVGGDGTLLQAGHLIDDSIPVLGVNSDPTRGEEVDMLSNEFDA-SRSKGYLCAATVNNFEQLLDNIL 146 (312)
Q Consensus 74 ~~~Dlvi~lGGDGT~L~a~~~~~~~~PilGIN~G~~~~~~~~~~~~~~~~-~~~~GfL~~~~~~~~~~~l~~l~ 146 (312)
.+.|.+|++|||||+-.|.++.+.++|++||-- +-+ |.+.. ..++||-+.++. +-+.++.+.
T Consensus 91 ~~Id~Li~IGGdgs~~~a~~L~e~~i~vigiPk-TID--------NDi~gtd~t~Gf~TA~~~--~~~~i~~i~ 153 (317)
T cd00763 91 HGIDALVVIGGDGSYMGAMRLTEHGFPCVGLPG-TID--------NDIPGTDYTIGFDTALNT--VVEAIDRIR 153 (317)
T ss_pred cCCCEEEEECCchHHHHHHHHHHcCCCEEEecc-ccc--------CCCCCCccCCCHHHHHHH--HHHHHHHHH
Confidence 367999999999999888776656799999932 111 11111 237999988753 334455554
No 47
>PLN02884 6-phosphofructokinase
Probab=88.28 E-value=0.31 Score=48.38 Aligned_cols=63 Identities=17% Similarity=0.380 Sum_probs=39.8
Q ss_pred ccccEEEEEcCCcceEeecccCC------CCcceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHh
Q 021432 74 RNVDLVVTVGGDGTLLQAGHLID------DSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNIL 146 (312)
Q Consensus 74 ~~~Dlvi~lGGDGT~L~a~~~~~------~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~ 146 (312)
.+.|.+|+||||||+-.|.++.+ .++|++||- ++-+++-. .. ..+.||-+.++. +-++++++.
T Consensus 142 ~~Id~LivIGGdgS~~~a~~L~~~~~~~g~~i~vIGIP-kTIDNDi~-----~t--D~TiGFdTAv~~--~~~ai~~l~ 210 (411)
T PLN02884 142 RGINMLFVLGGNGTHAGANAIHNECRKRKMKVSVVGVP-KTIDNDIL-----LM--DKTFGFDTAVEE--AQRAINSAY 210 (411)
T ss_pred cCCCEEEEECCchHHHHHHHHHHHHHHcCCCceEEecc-ccccCCCc-----Cc--ccCCCHHHHHHH--HHHHHHHHH
Confidence 36799999999999988865432 349999993 21111110 11 137999888653 445555553
No 48
>cd01743 GATase1_Anthranilate_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in Anthranilate synthase. Type 1 glutamine amidotransferase (GATase1) domain found in Anthranilate synthase (ASase). This group contains proteins similar to para-aminobenzoate (PABA) synthase and ASase. These enzymes catalyze similar reactions and produce similar products, PABA and ortho-aminobenzoate (anthranilate). Each enzyme is composed of non-identical subunits: a glutamine amidotransferase subunit (component II) and a subunit that produces an aminobenzoate products (component I). ASase catalyses the synthesis of anthranilate from chorismate and glutamine and is a tetrameric protein comprising two copies each of components I and II. Component II of ASase belongs to the family of triad GTases which hydrolyze glutamine and transfer nascent ammonia between the active sites. In some bacteria, such as Escherichia coli, component II can be much larger than in other organisms, due to the prese
Probab=86.65 E-value=0.41 Score=41.68 Aligned_cols=58 Identities=24% Similarity=0.304 Sum_probs=36.5
Q ss_pred HHHhhhcCCcceeecccccCCC---ccccccEEEEEcCCcceEeec------ccCCCCcceeeccCC
Q 021432 50 CQDILSKKPIEWEPVFRNNLSR---PIRNVDLVVTVGGDGTLLQAG------HLIDDSIPVLGVNSD 107 (312)
Q Consensus 50 ~~~~l~~~~~~~~~~~~~~l~~---~~~~~Dlvi~lGGDGT~L~a~------~~~~~~~PilGIN~G 107 (312)
+.+.|++.|+++..+..+.... ...++|.+|+.||.|+..... +.+..++|+|||-.|
T Consensus 14 ~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~dgvil~gG~~~~~~~~~~~~i~~~~~~~~PvlGIC~G 80 (184)
T cd01743 14 LVQYLRELGAEVVVVRNDEITLEELELLNPDAIVISPGPGHPEDAGISLEIIRALAGKVPILGVCLG 80 (184)
T ss_pred HHHHHHHcCCceEEEeCCCCCHHHHhhcCCCEEEECCCCCCcccchhHHHHHHHHhcCCCEEEECHh
Confidence 3344555566555443332211 246799999999999976542 123346999999987
No 49
>PRK06895 putative anthranilate synthase component II; Provisional
Probab=85.56 E-value=0.39 Score=42.19 Aligned_cols=35 Identities=14% Similarity=0.136 Sum_probs=24.0
Q ss_pred cccccEEEEEcCCcceEe------ecccCCCCcceeeccCC
Q 021432 73 IRNVDLVVTVGGDGTLLQ------AGHLIDDSIPVLGVNSD 107 (312)
Q Consensus 73 ~~~~Dlvi~lGGDGT~L~------a~~~~~~~~PilGIN~G 107 (312)
++.+|.+|+.||-|.--. ..+.+..++|+|||-.|
T Consensus 41 l~~~d~iIi~gGp~~~~~~~~~~~~i~~~~~~~PiLGIClG 81 (190)
T PRK06895 41 VENFSHILISPGPDVPRAYPQLFAMLERYHQHKSILGVCLG 81 (190)
T ss_pred hccCCEEEECCCCCChHHhhHHHHHHHHhcCCCCEEEEcHH
Confidence 457899999999993111 11112347999999988
No 50
>PRK03202 6-phosphofructokinase; Provisional
Probab=84.90 E-value=0.24 Score=47.50 Aligned_cols=63 Identities=25% Similarity=0.444 Sum_probs=41.8
Q ss_pred ccccEEEEEcCCcceEeecccCCCCcceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHh
Q 021432 74 RNVDLVVTVGGDGTLLQAGHLIDDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNIL 146 (312)
Q Consensus 74 ~~~Dlvi~lGGDGT~L~a~~~~~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~ 146 (312)
.+.|.+|++|||||+-.+.++.+.++|++||-. + ++.-.... ..++||-+.++. +-++++++.
T Consensus 92 ~~Id~Li~IGGd~s~~~a~~L~e~~i~vigiPk-T-----IDNDl~gt--d~s~Gf~TA~~~--~~~~i~~l~ 154 (320)
T PRK03202 92 LGIDALVVIGGDGSYMGAKRLTEHGIPVIGLPG-T-----IDNDIAGT--DYTIGFDTALNT--AVEAIDRLR 154 (320)
T ss_pred cCCCEEEEeCChHHHHHHHHHHhcCCcEEEecc-c-----ccCCCCCC--ccCcCHHHHHHH--HHHHHHHHH
Confidence 367999999999999988877666899999942 1 11111111 238999888652 344555553
No 51
>KOG4435 consensus Predicted lipid kinase [Lipid transport and metabolism; Signal transduction mechanisms]
Probab=82.54 E-value=2 Score=42.31 Aligned_cols=110 Identities=17% Similarity=0.268 Sum_probs=55.1
Q ss_pred CcceeecccccCCC------ccc-cccEEEEEcCCcceEeecc-cC---CCCcceeeccCCCCc-hhHHhhhhhcccccc
Q 021432 58 PIEWEPVFRNNLSR------PIR-NVDLVVTVGGDGTLLQAGH-LI---DDSIPVLGVNSDPTR-GEEVDMLSNEFDASR 125 (312)
Q Consensus 58 ~~~~~~~~~~~l~~------~~~-~~Dlvi~lGGDGT~L~a~~-~~---~~~~PilGIN~G~~~-~~~~~~~~~~~~~~~ 125 (312)
|.+++++..+...+ ..+ ..|+++|.|||||+=.+.- .+ ....|+ |+-+|+.+ +..--.+.+-|+..-
T Consensus 92 G~~V~Ivktd~~gqak~l~e~~~t~~Dii~VaGGDGT~~eVVTGi~Rrr~~~~pv-~~~P~G~~~l~~~s~l~~vfe~~d 170 (535)
T KOG4435|consen 92 GVQVDIVKTDNQGQAKALAEAVDTQEDIIYVAGGDGTIGEVVTGIFRRRKAQLPV-GFYPGGYDNLWLKSMLPSVFENSD 170 (535)
T ss_pred cceEEEEecCcHHHHHHHHHHhccCCCeEEEecCCCcHHHhhHHHHhcccccCce-eeccCccchHhhhhhchhhhccch
Confidence 55666554444322 122 2399999999999866542 22 224554 33333221 111112233332100
Q ss_pred ccccchHHhhhcHHHHHHHHhcCccccCccceEEEEecCc-ccCcccccchhhh
Q 021432 126 SKGYLCAATVNNFEQLLDNILEGKTVPSNLSRILIRVNSK-SLPTFALNDILIA 178 (312)
Q Consensus 126 ~~GfL~~~~~~~~~~~l~~l~~g~~~~~~~~rl~~~~~g~-~~~~~ALNDv~I~ 178 (312)
+...+-++...+++++-+ .--++.+.-.|. ..+.++||++.-.
T Consensus 171 --------~V~h~~~a~~avikde~k--sv~~fdv~~~gs~l~P~fgl~glswG 214 (535)
T KOG4435|consen 171 --------DVRHACEAAMAVIKDEKK--SVYAFDVTTEGSTLAPEFGLGGLSWG 214 (535)
T ss_pred --------HHHHHHHHHHHHhccccc--ceEEEEeccCCCccccccccCccchh
Confidence 134455666677777643 122444433443 3477899998654
No 52
>PTZ00286 6-phospho-1-fructokinase; Provisional
Probab=82.00 E-value=0.37 Score=48.51 Aligned_cols=62 Identities=23% Similarity=0.405 Sum_probs=39.7
Q ss_pred ccccEEEEEcCCcceEeecccCC------CCcceeeccCCCCchhHHhhhhhcccc-ccccccchHHhhhcHHHHHHHHh
Q 021432 74 RNVDLVVTVGGDGTLLQAGHLID------DSIPVLGVNSDPTRGEEVDMLSNEFDA-SRSKGYLCAATVNNFEQLLDNIL 146 (312)
Q Consensus 74 ~~~Dlvi~lGGDGT~L~a~~~~~------~~~PilGIN~G~~~~~~~~~~~~~~~~-~~~~GfL~~~~~~~~~~~l~~l~ 146 (312)
.+.|.+++||||||+-.|.+..+ .++|++||-- + + -|.... ..+.||-+.++ .+.++++.+.
T Consensus 175 ~~I~~L~vIGGdgT~~~A~~L~ee~~~~g~~I~VIGIPK-T-----I---DNDI~~td~S~GFdTAv~--~~~~aI~~~~ 243 (459)
T PTZ00286 175 HGINILFTLGGDGTHRGALAIYKELRRRKLNISVVGIPK-T-----I---DNDIPIIDESFGFQTAVE--EAQNAIRAAY 243 (459)
T ss_pred cCCCEEEEeCCchHHHHHHHHHHHHHHhCCCceEEEecc-c-----c---CCCCCCcccCcCchHHHH--HHHHHHHHHH
Confidence 36789999999999988865432 3599999932 1 1 122211 25899988865 3344555543
No 53
>PRK06555 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Validated
Probab=81.88 E-value=0.35 Score=47.81 Aligned_cols=63 Identities=29% Similarity=0.409 Sum_probs=40.2
Q ss_pred cccEEEEEcCCcceEeecccCC------CCcceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhc
Q 021432 75 NVDLVVTVGGDGTLLQAGHLID------DSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILE 147 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~~~~~------~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~ 147 (312)
+.|.+|++|||||+-.|.++.+ .++|++||-- + ++.-....+ .++||-+.++ .+-++++++..
T Consensus 112 ~Id~Li~IGGdgS~~~a~~L~~~~~~~g~~i~vvgIPk-T-----IDNDl~~td--~t~Gf~TA~~--~~~~ai~~l~~ 180 (403)
T PRK06555 112 GVDILHTIGGDDTNTTAADLAAYLAENGYDLTVVGLPK-T-----IDNDVVPIR--QSLGAWTAAE--QGARFFDNVIN 180 (403)
T ss_pred CCCEEEEECChhHHHHHHHHHHHHHHhCCCceEEEeee-e-----eeCCCCCcc--CCcCHHHHHH--HHHHHHHHHHH
Confidence 6799999999999988866432 3699999932 1 111111112 3799988865 33455555543
No 54
>cd00363 PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to PFK family that includes ATP- and pyrophosphate (PPi)- dependent phosphofructokinases. Some members evolved by gene duplication and thus have a large C-terminal/N-terminal extension comprising a second PFK domain. Generally, ATP-PFKs are allosteric homotetramers, and PPi-PFKs are dimeric and nonallosteric except for plant PPi-PFKs which are allosteric heterotetramers.
Probab=81.29 E-value=0.32 Score=47.05 Aligned_cols=63 Identities=24% Similarity=0.469 Sum_probs=41.0
Q ss_pred ccccEEEEEcCCcceEeecccCC------CCcceeeccCCCCchhHHhhhhhcccc-ccccccchHHhhhcHHHHHHHHh
Q 021432 74 RNVDLVVTVGGDGTLLQAGHLID------DSIPVLGVNSDPTRGEEVDMLSNEFDA-SRSKGYLCAATVNNFEQLLDNIL 146 (312)
Q Consensus 74 ~~~Dlvi~lGGDGT~L~a~~~~~------~~~PilGIN~G~~~~~~~~~~~~~~~~-~~~~GfL~~~~~~~~~~~l~~l~ 146 (312)
.+.|.+|++|||||+-.+.++.+ .++|++||-- +-+ |.+.. ..++||-+.++ .+.++++++.
T Consensus 91 ~~I~~Lv~IGGd~s~~~a~~L~e~~~~~~~~i~vigiPk-TID--------NDl~~td~s~Gf~TA~~--~~~~~i~~l~ 159 (338)
T cd00363 91 HGIDALVVIGGDGSYTGADLLTEEWPSKYQGFNVIGLPG-TID--------NDIKGTDYTIGFDTALK--TIVEAIDRIR 159 (338)
T ss_pred hCCCEEEEeCCHHHHHHHHHHHHHHHhcCCCccEEEeee-ccc--------CCCcCcccCcCHHHHHH--HHHHHHHHHH
Confidence 36799999999999988865432 2799999942 111 11111 23799988865 3455666665
Q ss_pred c
Q 021432 147 E 147 (312)
Q Consensus 147 ~ 147 (312)
.
T Consensus 160 ~ 160 (338)
T cd00363 160 D 160 (338)
T ss_pred H
Confidence 4
No 55
>PRK14072 6-phosphofructokinase; Provisional
Probab=80.55 E-value=0.39 Score=47.76 Aligned_cols=61 Identities=13% Similarity=0.187 Sum_probs=37.6
Q ss_pred cccEEEEEcCCcceEeecccCC------CCcceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHH
Q 021432 75 NVDLVVTVGGDGTLLQAGHLID------DSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNI 145 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~~~~~------~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l 145 (312)
+.|.+|+||||||+-.|.++.+ .++|++||- ++-+++-.+ - ..+.||-+.++. +-++++++
T Consensus 103 ~Id~LivIGGdgS~~~a~~L~e~~~~~g~~i~vIgIP-kTIDNDl~g-----t--D~t~GF~TA~~~--i~~ai~~l 169 (416)
T PRK14072 103 DIGYFFYNGGNDSMDTALKVSQLAKKMGYPIRCIGIP-KTIDNDLPG-----T--DHCPGFGSAAKY--IATSVLEA 169 (416)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHHHhCCCceEEEee-ecccCCCCC-----C--CCCCChHHHHHH--HHHHHHHH
Confidence 6799999999999988865432 349999993 211111111 1 237899888652 33444444
No 56
>CHL00101 trpG anthranilate synthase component 2
Probab=80.18 E-value=1.3 Score=38.97 Aligned_cols=34 Identities=26% Similarity=0.401 Sum_probs=25.8
Q ss_pred ccccEEEEEcCCcceEeec------ccCCCCcceeeccCC
Q 021432 74 RNVDLVVTVGGDGTLLQAG------HLIDDSIPVLGVNSD 107 (312)
Q Consensus 74 ~~~Dlvi~lGGDGT~L~a~------~~~~~~~PilGIN~G 107 (312)
.++|.+|+.||.|..-... +.+..++|+|||-.|
T Consensus 42 ~~~dgiiisgGpg~~~~~~~~~~i~~~~~~~~PiLGIClG 81 (190)
T CHL00101 42 LNIRHIIISPGPGHPRDSGISLDVISSYAPYIPILGVCLG 81 (190)
T ss_pred CCCCEEEECCCCCChHHCcchHHHHHHhcCCCcEEEEchh
Confidence 3589999999999875431 123457999999988
No 57
>PRK06830 diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional
Probab=79.41 E-value=0.5 Score=47.37 Aligned_cols=61 Identities=25% Similarity=0.481 Sum_probs=39.1
Q ss_pred ccccEEEEEcCCcceEeecccCC------CCcceeeccCCCCchhHHhhhhhcccc-ccccccchHHhhhcHHHHHHHH
Q 021432 74 RNVDLVVTVGGDGTLLQAGHLID------DSIPVLGVNSDPTRGEEVDMLSNEFDA-SRSKGYLCAATVNNFEQLLDNI 145 (312)
Q Consensus 74 ~~~Dlvi~lGGDGT~L~a~~~~~------~~~PilGIN~G~~~~~~~~~~~~~~~~-~~~~GfL~~~~~~~~~~~l~~l 145 (312)
.+.|.+++||||||+-.|.+..+ .++|++||-- + + -|.... ..+.||-+.++ .+-++++.+
T Consensus 171 ~~I~~L~vIGGdgT~~gA~~l~ee~~~~g~~I~VIGIPK-T-----I---DNDi~~td~S~GFdTAv~--~a~~aI~~~ 238 (443)
T PRK06830 171 MNINILFVIGGDGTLRGASAIAEEIERRGLKISVIGIPK-T-----I---DNDINFIQKSFGFETAVE--KATEAIRCA 238 (443)
T ss_pred cCCCEEEEeCCchHHHHHHHHHHHHHHhCCCceEEEecc-c-----c---CCCCcCcccCCCHHHHHH--HHHHHHHHH
Confidence 36799999999999988865432 3589999942 1 1 111111 25899988865 234455544
No 58
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=79.37 E-value=2.2 Score=43.77 Aligned_cols=70 Identities=21% Similarity=0.385 Sum_probs=41.0
Q ss_pred EEEEcCCcce---EeecccCC--CCcc--eeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhcCccc
Q 021432 79 VVTVGGDGTL---LQAGHLID--DSIP--VLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILEGKTV 151 (312)
Q Consensus 79 vi~lGGDGT~---L~a~~~~~--~~~P--ilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~g~~~ 151 (312)
|++-|||||+ |.+...++ ...| ||...+| |.++ |-+|.=-.++-+-+.+++..+..|...
T Consensus 420 ILaCGGDGTVGWiLStLD~L~l~p~PPvailPLGTG-----------NDLA--RtlnWGGgytDEPvSkil~~ve~gtvV 486 (1004)
T KOG0782|consen 420 ILACGGDGTVGWILSTLDNLNLPPYPPVAILPLGTG-----------NDLA--RTLNWGGGYTDEPVSKILQAVEHGTVV 486 (1004)
T ss_pred EEEecCCCceeehhhhhhhcCCCCCCCeeEeecCCc-----------chHH--HhcccCCCcCcchHHHHHHHHhcCcEE
Confidence 7789999996 44443332 2233 4566665 2222 223322233445677888899999876
Q ss_pred cCccceEEEE
Q 021432 152 PSNLSRILIR 161 (312)
Q Consensus 152 ~~~~~rl~~~ 161 (312)
-..|.++.+.
T Consensus 487 qLDRW~lhvE 496 (1004)
T KOG0782|consen 487 QLDRWRLHVE 496 (1004)
T ss_pred eeeeeeeccc
Confidence 5556666664
No 59
>PTZ00287 6-phosphofructokinase; Provisional
Probab=79.26 E-value=0.92 Score=51.03 Aligned_cols=64 Identities=25% Similarity=0.452 Sum_probs=38.4
Q ss_pred cccEEEEEcCCcceEeecccCC----CCcc--eeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHh
Q 021432 75 NVDLVVTVGGDGTLLQAGHLID----DSIP--VLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNIL 146 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~~~~~----~~~P--ilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~ 146 (312)
+.|.+|+||||||+-.|+.+.+ .++| ++||- ++-+++ +.+++ -...+||=+.+.. +-+++.+|.
T Consensus 928 ~ID~LVvIGGDgS~t~A~~LaE~f~~~gi~i~VIGVP-kTIDND----L~~~~-tD~TiGFDTAv~~--~seaI~nL~ 997 (1419)
T PTZ00287 928 QLNGLVMPGSNVTITEAALLAEYFLEKKIPTSVVGIP-LTGSNN----LIHEL-IETCVGFDSSTKV--YASLIGNVL 997 (1419)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHHhcCCCccEEEeC-ceeeCC----CCCCC-CcCCCCHHHHHHH--HHHHHHHHH
Confidence 6799999999999998876432 4566 99993 211111 11100 0137999888653 334444443
No 60
>PRK06774 para-aminobenzoate synthase component II; Provisional
Probab=76.97 E-value=1.5 Score=38.55 Aligned_cols=33 Identities=30% Similarity=0.387 Sum_probs=25.4
Q ss_pred cccEEEEEcCCcceEeec------ccCCCCcceeeccCC
Q 021432 75 NVDLVVTVGGDGTLLQAG------HLIDDSIPVLGVNSD 107 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~------~~~~~~~PilGIN~G 107 (312)
++|.||..||.|+..... +.+..++|+|||-.|
T Consensus 43 ~~~~iilsgGP~~~~~~~~~~~~i~~~~~~~PiLGIC~G 81 (191)
T PRK06774 43 APSHLVISPGPCTPNEAGISLAVIRHFADKLPILGVCLG 81 (191)
T ss_pred CCCeEEEcCCCCChHhCCCchHHHHHhcCCCCEEEECHH
Confidence 579999999999965442 223457999999987
No 61
>PLN02564 6-phosphofructokinase
Probab=76.07 E-value=0.73 Score=46.60 Aligned_cols=61 Identities=23% Similarity=0.441 Sum_probs=38.2
Q ss_pred cccEEEEEcCCcceEeecccCC----CC--cceeeccCCCCchhHHhhhhhcccc-ccccccchHHhhhcHHHHHHHHh
Q 021432 75 NVDLVVTVGGDGTLLQAGHLID----DS--IPVLGVNSDPTRGEEVDMLSNEFDA-SRSKGYLCAATVNNFEQLLDNIL 146 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~~~~~----~~--~PilGIN~G~~~~~~~~~~~~~~~~-~~~~GfL~~~~~~~~~~~l~~l~ 146 (312)
+.|.+|+||||||+-.|.++.+ .+ ++++||-- + ++ |.+.. ..+.||-+.++ .+.++++++.
T Consensus 176 ~Id~LivIGGDGS~~gA~~L~e~~~~~g~~i~VIGIPK-T-----ID---NDI~~tD~T~GFdTAv~--~~~~aI~~i~ 243 (484)
T PLN02564 176 GINQVYIIGGDGTQKGASVIYEEIRRRGLKVAVAGIPK-T-----ID---NDIPVIDKSFGFDTAVE--EAQRAINAAH 243 (484)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHHHcCCCceEEEecc-c-----cc---CCCcCcccCCCHHHHHH--HHHHHHHHHH
Confidence 6799999999999988865432 33 55899832 1 11 11111 24799988865 3445555553
No 62
>TIGR02478 6PF1K_euk 6-phosphofructokinase, eukaryotic type. Members of this family are eukaryotic (with one exception) ATP-dependent 6-phosphofructokinases (EC 2.7.1.11) in which two tandem copies of the phosphofructokinase are found. Members are found, often including several isozymes, in animals and fungi and in the bacterium Propionibacterium acnes KPA171202 (a human skin commensal).
Probab=75.23 E-value=1.8 Score=46.17 Aligned_cols=64 Identities=22% Similarity=0.335 Sum_probs=39.0
Q ss_pred ccccEEEEEcCCcceEeecccC-----------------------CCCcceeeccCCCCchhHHhhhhhccccccccccc
Q 021432 74 RNVDLVVTVGGDGTLLQAGHLI-----------------------DDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYL 130 (312)
Q Consensus 74 ~~~Dlvi~lGGDGT~L~a~~~~-----------------------~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL 130 (312)
.+.|.+|++|||||+-.|..+. ..++|++||- ++-+++-.+ . ..+.||-
T Consensus 93 ~~Id~LivIGGdgS~~~a~~l~~e~~~~~~~l~~~~~i~~~~~~~~~~l~vvGiP-kTIDNDl~g-----T--d~TiGfd 164 (745)
T TIGR02478 93 RGIDNLVVIGGDGSLTGADLFREEWPSLLEELVDTGKITAEQAEEHRHLTIVGLV-GSIDNDMCG-----T--DMTIGAD 164 (745)
T ss_pred hCCCEEEEECChhHHHHHHHHHHHhHHHHHHHHHccchhHHHHhcCCCCcEEEEc-cccccCCCC-----C--cCCCCHH
Confidence 3679999999999987765211 1268999994 322111111 1 1379998
Q ss_pred hHHhhhcHHHHHHHHhc
Q 021432 131 CAATVNNFEQLLDNILE 147 (312)
Q Consensus 131 ~~~~~~~~~~~l~~l~~ 147 (312)
+.++. +-++++++..
T Consensus 165 TA~~~--i~~aid~i~~ 179 (745)
T TIGR02478 165 SALHR--ICEAIDAISS 179 (745)
T ss_pred HHHHH--HHHHHHHHHh
Confidence 88652 3455555544
No 63
>cd00764 Eukaryotic_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include eukaryotic ATP-dependent phosphofructokinases. These have evolved from the bacterial PFKs by gene duplication and fusion events and exhibit complex allosteric behavior.
Probab=75.05 E-value=1.9 Score=46.17 Aligned_cols=61 Identities=23% Similarity=0.208 Sum_probs=39.4
Q ss_pred cccEEEEEcCCcceEeecccCC-------CCcceeeccCCCCchhHHhhhhhcccc-ccccccchHHhhhcHHHHHHHHh
Q 021432 75 NVDLVVTVGGDGTLLQAGHLID-------DSIPVLGVNSDPTRGEEVDMLSNEFDA-SRSKGYLCAATVNNFEQLLDNIL 146 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~~~~~-------~~~PilGIN~G~~~~~~~~~~~~~~~~-~~~~GfL~~~~~~~~~~~l~~l~ 146 (312)
+.|.+|+||||||+-.+.++.+ ..+|++||- .+- -|+..- ..++||-+.++ .+-+.++++.
T Consensus 478 ~Id~LivIGGdgs~~~a~~L~~~~~~y~~~~i~vVgIP-kTI--------DNDv~gTd~siGfdTAln--~~~~~id~i~ 546 (762)
T cd00764 478 GIDGLIIVGGFEAYKGLLQLREAREQYEEFCIPMVLIP-ATV--------SNNVPGTDFSLGSDTALN--ALMKYCDRIK 546 (762)
T ss_pred CCCEEEEECChhHHHHHHHHHHHHhhCCCCCccEEEec-ccc--------cCCCCCCcCCCCHHHHHH--HHHHHHHHHH
Confidence 6799999999999987755431 469999993 211 122211 13799988865 3445555663
No 64
>PRK05670 anthranilate synthase component II; Provisional
Probab=75.04 E-value=1.9 Score=37.78 Aligned_cols=33 Identities=36% Similarity=0.536 Sum_probs=24.0
Q ss_pred cccEEEEEcCCcceEeec------ccCCCCcceeeccCC
Q 021432 75 NVDLVVTVGGDGTLLQAG------HLIDDSIPVLGVNSD 107 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~------~~~~~~~PilGIN~G 107 (312)
++|.+|+.||-|+.-.+. +.+..++|+|||-.|
T Consensus 43 ~~dglIlsgGpg~~~d~~~~~~~l~~~~~~~PvLGIClG 81 (189)
T PRK05670 43 NPDAIVLSPGPGTPAEAGISLELIREFAGKVPILGVCLG 81 (189)
T ss_pred CCCEEEEcCCCCChHHcchHHHHHHHhcCCCCEEEECHH
Confidence 379999999999973321 112346999999988
No 65
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=71.58 E-value=1.1 Score=38.46 Aligned_cols=68 Identities=28% Similarity=0.445 Sum_probs=47.1
Q ss_pred ccCCCccccccEEEEEcCCcceEeecccCCCCccee-eccCCCCchhHHh-----hhhhccccccccccchHHhhhcHHH
Q 021432 67 NNLSRPIRNVDLVVTVGGDGTLLQAGHLIDDSIPVL-GVNSDPTRGEEVD-----MLSNEFDASRSKGYLCAATVNNFEQ 140 (312)
Q Consensus 67 ~~l~~~~~~~Dlvi~lGGDGT~L~a~~~~~~~~Pil-GIN~G~~~~~~~~-----~~~~~~~~~~~~GfL~~~~~~~~~~ 140 (312)
..+.+++.++|+||+-+|-||.|.+.+. ++|++ -||- .++ ++.+.++ ..|+|--+.+.++.+
T Consensus 72 psl~e~I~~AdlVIsHAGaGS~letL~l---~KPlivVvNd------~LMDNHQ~ELA~qL~---~egyL~~C~ps~L~~ 139 (170)
T KOG3349|consen 72 PSLTEDIRSADLVISHAGAGSCLETLRL---GKPLIVVVND------SLMDNHQLELAKQLA---EEGYLYYCTPSTLPA 139 (170)
T ss_pred ccHHHHHhhccEEEecCCcchHHHHHHc---CCCEEEEeCh------HhhhhHHHHHHHHHH---hcCcEEEeeccchHH
Confidence 4455678899999999999999988663 57865 5563 232 3445555 567777777777777
Q ss_pred HHHHHh
Q 021432 141 LLDNIL 146 (312)
Q Consensus 141 ~l~~l~ 146 (312)
.|.++-
T Consensus 140 ~L~~~~ 145 (170)
T KOG3349|consen 140 GLAKLD 145 (170)
T ss_pred HHHhhc
Confidence 665553
No 66
>PTZ00468 phosphofructokinase family protein; Provisional
Probab=71.54 E-value=1 Score=50.30 Aligned_cols=55 Identities=18% Similarity=0.218 Sum_probs=34.9
Q ss_pred ccccEEEEEcCCcceEeecccCC-----------CCcceeeccCCCCchhHHhhhhhccccccccccchHHh
Q 021432 74 RNVDLVVTVGGDGTLLQAGHLID-----------DSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAAT 134 (312)
Q Consensus 74 ~~~Dlvi~lGGDGT~L~a~~~~~-----------~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~ 134 (312)
.+.|.+|+||||||+-.|+.+.+ .++||+||-- .-++ ++.+++- .-.+||-+.+.
T Consensus 799 ~~Id~LVvIGGDgS~t~A~~Lae~~~~~~~~~~~~gi~VIgVPk-TIDN----Dl~~~~t-e~TiGFDTA~~ 864 (1328)
T PTZ00468 799 FNMRAIAIVGNSEAATFGASLSEQLICMSLNGMKSEIPVVFVPV-CLEN----SISHQMI-ETCIGFDSVTK 864 (1328)
T ss_pred cCCCEEEEeCCchHHHHHHHHHHHHhhhccccccCCCcEEEeCc-cccC----CCCCCCc-cccccHHhHHH
Confidence 36799999999999998876432 2699999932 1111 1111111 12688888875
No 67
>PRK07649 para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II; Validated
Probab=70.32 E-value=3 Score=36.96 Aligned_cols=33 Identities=24% Similarity=0.416 Sum_probs=24.9
Q ss_pred cccEEEEEcCCcceEeec------ccCCCCcceeeccCC
Q 021432 75 NVDLVVTVGGDGTLLQAG------HLIDDSIPVLGVNSD 107 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~------~~~~~~~PilGIN~G 107 (312)
++|.||..||-|...... +.+..++|+|||-.|
T Consensus 43 ~~d~iIlsgGP~~p~~~~~~~~~i~~~~~~~PvLGIClG 81 (195)
T PRK07649 43 KPDFLMISPGPCSPNEAGISMEVIRYFAGKIPIFGVCLG 81 (195)
T ss_pred CCCEEEECCCCCChHhCCCchHHHHHhcCCCCEEEEcHH
Confidence 589999999999865432 112347999999988
No 68
>PF00365 PFK: Phosphofructokinase; InterPro: IPR000023 The enzyme-catalysed transfer of a phosphoryl group from ATP is an important reaction in a wide variety of biological processes []. One enzyme that utilises this reaction is phosphofructokinase (PFK), which catalyses the phosphorylation of fructose-6-phosphate to fructose-1,6- bisphosphate, a key regulatory step in the glycolytic pathway [, ]. PFK exists as a homotetramer in bacteria and mammals (where each monomer possesses 2 similar domains), and as an octomer in yeast (where there are 4 alpha- (PFK1) and 4 beta-chains (PFK2), the latter, like the mammalian monomers, possessing 2 similar domains []). PFK is ~300 amino acids in length, and structural studies of the bacterial enzyme have shown it comprises two similar (alpha/beta) lobes: one involved in ATP binding and the other housing both the substrate-binding site and the allosteric site (a regulatory binding site distinct from the active site, but that affects enzyme activity). The identical tetramer subunits adopt 2 different conformations: in a 'closed' state, the bound magnesium ion bridges the phosphoryl groups of the enzyme products (ADP and fructose-1,6- bisphosphate); and in an 'open' state, the magnesium ion binds only the ADP [], as the 2 products are now further apart. These conformations are thought to be successive stages of a reaction pathway that requires subunit closure to bring the 2 molecules sufficiently close to react []. Deficiency in PFK leads to glycogenosis type VII (Tauri's disease), an autosomal recessive disorder characterised by severe nausea, vomiting, muscle cramps and myoglobinuria in response to bursts of intense or vigorous exercise []. Sufferers are usually able to lead a reasonably ordinary life by learning to adjust activity levels [].; GO: 0003872 6-phosphofructokinase activity, 0006096 glycolysis, 0005945 6-phosphofructokinase complex; PDB: 3O8O_E 3OPY_H 1PFK_A 2PFK_D 1MTO_F 3U39_C 6PFK_A 4PFK_A 3PFK_A 3HNO_B ....
Probab=70.30 E-value=0.51 Score=44.45 Aligned_cols=62 Identities=29% Similarity=0.556 Sum_probs=38.6
Q ss_pred cccEEEEEcCCcceEeecccC-CCCcceeeccCCCCchhHHhhhhhcccc-ccccccchHHhhhcHHHHHHHHhc
Q 021432 75 NVDLVVTVGGDGTLLQAGHLI-DDSIPVLGVNSDPTRGEEVDMLSNEFDA-SRSKGYLCAATVNNFEQLLDNILE 147 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~~~~-~~~~PilGIN~G~~~~~~~~~~~~~~~~-~~~~GfL~~~~~~~~~~~l~~l~~ 147 (312)
+.|.+|++|||||+-.|.++. ...+|++||-. + + -|+..- ..++||-+.++. +-++++.+..
T Consensus 92 ~Id~Li~IGG~gs~~~a~~L~~~~~i~vigiPk-T-----I---DNDi~gtd~siGf~TA~~~--~~~~i~~i~~ 155 (282)
T PF00365_consen 92 GIDALIVIGGDGSMKGAHKLSEEFGIPVIGIPK-T-----I---DNDIPGTDYSIGFDTAVNY--IAEAIDNIKT 155 (282)
T ss_dssp TESEEEEEESHHHHHHHHHHHHHHHSEEEEEEE-E-----T---TSSCTTSSS-BTHHHHHHH--HHHHHHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHhcCceEEEEEec-c-----c---cCCcCCCCCCcccCchhHH--HHHHHHHHHH
Confidence 578999999999987776554 23589999832 1 1 111110 137999888753 4456666643
No 69
>TIGR02477 PFKA_PPi diphosphate--fructose-6-phosphate 1-phosphotransferase. Diphosphate--fructose-6-phosphate 1-phosphotransferase catalyzes the addition of phosphate from diphosphate (PPi) to fructose 6-phosphate to give fructose 1,6-bisphosphate (EC 2.7.1.90). The enzyme is also known as pyrophosphate-dependent phosphofructokinase. The usage of PPi-dependent enzymes in glycolysis presumably frees up ATP for other processes. TIGR02482 represents the ATP-dependent 6-phosphofructokinase enzyme contained within Pfam pfam00365: Phosphofructokinase. This model hits primarily bacterial, plant alpha, and plant beta sequences.
Probab=69.00 E-value=1.3 Score=45.45 Aligned_cols=54 Identities=31% Similarity=0.428 Sum_probs=34.5
Q ss_pred cccEEEEEcCCcceEeecccC------CCCcceeeccCCCCchhHHhhhhhccccccccccchHHh
Q 021432 75 NVDLVVTVGGDGTLLQAGHLI------DDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAAT 134 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~~~~------~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~ 134 (312)
+.|.+|++|||||+-.|.++. +.+++++||-- +-++ ++.+++ -..+.||-+.+.
T Consensus 161 ~Id~LviIGGdgS~~~A~~Lae~~~~~g~~i~VIGIPk-TIDN----Dl~~~~-td~s~GFdTA~~ 220 (539)
T TIGR02477 161 KLDGLVIIGGDDSNTNAALLAEYFAKHGLKTQVIGVPK-TIDG----DLKNQF-IETSFGFDTACK 220 (539)
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHHhcCCCceEEEEee-eecC----CCCCCC-CCCCcCHHHHHH
Confidence 679999999999998886543 23599999932 1110 111100 023799988865
No 70
>PLN03028 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Provisional
Probab=68.81 E-value=1.1 Score=46.52 Aligned_cols=53 Identities=25% Similarity=0.352 Sum_probs=34.4
Q ss_pred cccEEEEEcCCcceEeecccC------CCCcceeeccCCCCchhHHh-hhhhccccccccccchHHh
Q 021432 75 NVDLVVTVGGDGTLLQAGHLI------DDSIPVLGVNSDPTRGEEVD-MLSNEFDASRSKGYLCAAT 134 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~~~~------~~~~PilGIN~G~~~~~~~~-~~~~~~~~~~~~GfL~~~~ 134 (312)
+.|.+|+||||||+-.|+++. +.+++++||-- + ++ ++.+++- ..+.||=+.+.
T Consensus 173 ~Id~LvvIGGddS~~~A~~Lae~~~~~~~~i~VIGIPK-T-----IDNDL~~~~t-d~s~GFdTA~k 232 (610)
T PLN03028 173 KLDGLVIIGGVTSNTDAAQLAETFAEAKCKTKVVGVPV-T-----LNGDLKNQFV-ETNVGFDTICK 232 (610)
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHHHcCCCceEEEece-e-----eeCCCCCCCC-CCCcCHHHHHH
Confidence 679999999999998886543 23799999932 1 11 1211110 14789988764
No 71
>PRK08857 para-aminobenzoate synthase component II; Provisional
Probab=68.33 E-value=4 Score=35.90 Aligned_cols=33 Identities=27% Similarity=0.263 Sum_probs=24.7
Q ss_pred cccEEEEEcCCcceEee------cccCCCCcceeeccCC
Q 021432 75 NVDLVVTVGGDGTLLQA------GHLIDDSIPVLGVNSD 107 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a------~~~~~~~~PilGIN~G 107 (312)
++|.+|+.||.|..-.. .+.+..++|+|||-.|
T Consensus 43 ~~~~iilsgGp~~~~~~~~~~~~i~~~~~~~PiLGIClG 81 (193)
T PRK08857 43 NPTHLVISPGPCTPNEAGISLQAIEHFAGKLPILGVCLG 81 (193)
T ss_pred CCCEEEEeCCCCChHHCcchHHHHHHhcCCCCEEEEcHH
Confidence 47899999999886542 1223457999999988
No 72
>PRK07567 glutamine amidotransferase; Provisional
Probab=67.89 E-value=4.7 Score=36.96 Aligned_cols=36 Identities=17% Similarity=0.247 Sum_probs=25.8
Q ss_pred ccccccEEEEEcCCcceEee---------------ccc----CCCCcceeeccCC
Q 021432 72 PIRNVDLVVTVGGDGTLLQA---------------GHL----IDDSIPVLGVNSD 107 (312)
Q Consensus 72 ~~~~~Dlvi~lGGDGT~L~a---------------~~~----~~~~~PilGIN~G 107 (312)
+.+++|.+|+.||.+...-. .+. ...++|+|||-.|
T Consensus 48 ~~~~~dgvIi~Gg~~~~~d~~~~~~pw~~~~~~~i~~~i~~~~~~~~PvLGIC~G 102 (242)
T PRK07567 48 DLDDYSGVIVGGSPFNVSDPAESKSPWQRRVEAELSGLLDEVVARDFPFLGACYG 102 (242)
T ss_pred CHhhccEEEEcCCCCcCCCCCCccchHHHHHHHHHHHHHHHHHhcCCCEEEEchh
Confidence 45678999999998765322 011 1457999999998
No 73
>cd01742 GATase1_GMP_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in GMP synthetase. Type 1 glutamine amidotransferase (GATase1) domain found in GMP synthetase. GMP synthetase is a glutamine amidotransferase from the de novo purine biosynthetic pathway. Glutamine amidotransferase (GATase) activity catalyse the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. GMP synthetase catalyses the amination of the nucleotide precursor xanthosine 5'-monophospahte to form GMP. GMP synthetase belongs to the triad family of amidotransferases having a conserved Cys-His-Glu catalytic triad in the glutaminase active site.
Probab=67.28 E-value=5 Score=34.47 Aligned_cols=58 Identities=14% Similarity=0.193 Sum_probs=34.6
Q ss_pred HHHhhhcCCcceeecccccC--CCccccccEEEEEcCCcceEee-----ccc-CCCCcceeeccCC
Q 021432 50 CQDILSKKPIEWEPVFRNNL--SRPIRNVDLVVTVGGDGTLLQA-----GHL-IDDSIPVLGVNSD 107 (312)
Q Consensus 50 ~~~~l~~~~~~~~~~~~~~l--~~~~~~~Dlvi~lGGDGT~L~a-----~~~-~~~~~PilGIN~G 107 (312)
+.+.|++.|.++..+..+.- .....++|.+|.-||.+..... .+. .+.++|++||-.|
T Consensus 14 ~~~~l~~~G~~~~~~~~~~~~~~~~~~~~dgvIl~Gg~~~~~~~~~~~~~~~~~~~~~PilGIC~G 79 (181)
T cd01742 14 IARRVRELGVYSEILPNTTPLEEIKLKNPKGIILSGGPSSVYEEDAPRVDPEIFELGVPVLGICYG 79 (181)
T ss_pred HHHHHHhcCceEEEecCCCChhhhcccCCCEEEECCCcccccccccchhhHHHHhcCCCEEEEcHH
Confidence 34445555655444332211 1135679999999998765432 121 2347999999988
No 74
>COG4069 Uncharacterized protein conserved in archaea [Function unknown]
Probab=67.10 E-value=4 Score=38.69 Aligned_cols=57 Identities=28% Similarity=0.264 Sum_probs=39.0
Q ss_pred ccccccEEEEEcCCcceEeecccCCCCcceeeccCCCCchhHHhhhhhccccccccccchH
Q 021432 72 PIRNVDLVVTVGGDGTLLQAGHLIDDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCA 132 (312)
Q Consensus 72 ~~~~~Dlvi~lGGDGT~L~a~~~~~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~ 132 (312)
.++.++++|++|-|=|-+.+--....++||+||--|- -.+..+|.+-.++++=++..
T Consensus 263 l~~~~~lvvTvGDDTT~vagdIl~RfgipiiGItDgD----~D~~~~~~~~~~gsvi~~l~ 319 (367)
T COG4069 263 LIEGAGLVVTVGDDTTEVAGDILYRFGIPIIGITDGD----CDEVTREVNIAPGSVILLLK 319 (367)
T ss_pred hhccCceEEEEcCcchhHHHHHHHhcCCcEEecccCC----hHHhhhhcccCCCcEEEEEc
Confidence 4678899999999988877654445589999998772 22344555555566555433
No 75
>PLN02251 pyrophosphate-dependent phosphofructokinase
Probab=66.64 E-value=1.6 Score=45.05 Aligned_cols=53 Identities=26% Similarity=0.392 Sum_probs=34.1
Q ss_pred cccEEEEEcCCcceEeecccC------CCCcceeeccCCCCchhHHh-hhhhccccccccccchHHh
Q 021432 75 NVDLVVTVGGDGTLLQAGHLI------DDSIPVLGVNSDPTRGEEVD-MLSNEFDASRSKGYLCAAT 134 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~~~~------~~~~PilGIN~G~~~~~~~~-~~~~~~~~~~~~GfL~~~~ 134 (312)
+.|.+|++|||||+-.|+++. +.+++|+||-- + ++ ++.+. +...+.||=+.+.
T Consensus 190 ~Id~LViIGGddS~~~A~~Lae~~~~~g~~i~VIGVPK-T-----IDNDL~~t-d~e~s~GFdTA~k 249 (568)
T PLN02251 190 DLDGLVVIGGDDSNTNACLLAEYFRAKNLKTRVIGCPK-T-----IDGDLKSK-EVPTSFGFDTACK 249 (568)
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHHhcCCCeeEEEeCc-e-----EeCCCCCC-cCCCCCCHHHHHH
Confidence 679999999999999886543 23589999932 1 11 11111 1113789988765
No 76
>PRK07085 diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional
Probab=66.58 E-value=1.3 Score=45.58 Aligned_cols=30 Identities=33% Similarity=0.477 Sum_probs=24.9
Q ss_pred cccEEEEEcCCcceEeecccC------CCCcceeec
Q 021432 75 NVDLVVTVGGDGTLLQAGHLI------DDSIPVLGV 104 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~~~~------~~~~PilGI 104 (312)
+.|.+|++|||||+-.|.++. +.++|++||
T Consensus 164 ~Id~LviIGGd~S~~~A~~Lae~~~~~~~~i~VIGI 199 (555)
T PRK07085 164 KLDGLVIIGGDDSNTNAAILAEYFAKHGCKTQVIGV 199 (555)
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHHHhCCCccEEEE
Confidence 679999999999998886543 237999999
No 77
>KOG1116 consensus Sphingosine kinase, involved in sphingolipid metabolism [Lipid transport and metabolism; Signal transduction mechanisms]
Probab=66.25 E-value=5 Score=41.27 Aligned_cols=36 Identities=28% Similarity=0.408 Sum_probs=25.0
Q ss_pred ccccccEEEEEcCCcceEeecc-cC---C----CCcceeeccCC
Q 021432 72 PIRNVDLVVTVGGDGTLLQAGH-LI---D----DSIPVLGVNSD 107 (312)
Q Consensus 72 ~~~~~Dlvi~lGGDGT~L~a~~-~~---~----~~~PilGIN~G 107 (312)
++.++|-||++||||++-.+.. ++ + ..+||-=|-+|
T Consensus 233 dl~kyDgIv~vsGDGl~hEVlNGLl~R~D~~~~~klPigiiP~G 276 (579)
T KOG1116|consen 233 DLGKYDGIVCVSGDGLLHEVLNGLLERPDWEAAVKLPIGIIPCG 276 (579)
T ss_pred hccccceEEEecCCcCHHHhhhccccccchhhHhcCceeEeecC
Confidence 5678999999999999876653 22 1 25676444444
No 78
>PLN02335 anthranilate synthase
Probab=64.09 E-value=4 Score=36.93 Aligned_cols=33 Identities=24% Similarity=0.263 Sum_probs=24.4
Q ss_pred cccEEEEEcCCcceEee------cccCCCCcceeeccCC
Q 021432 75 NVDLVVTVGGDGTLLQA------GHLIDDSIPVLGVNSD 107 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a------~~~~~~~~PilGIN~G 107 (312)
++|.||..||-|..-.. .+.....+|++||-.|
T Consensus 62 ~~d~iVisgGPg~p~d~~~~~~~~~~~~~~~PiLGIClG 100 (222)
T PLN02335 62 NPRGVLISPGPGTPQDSGISLQTVLELGPLVPLFGVCMG 100 (222)
T ss_pred CCCEEEEcCCCCChhhccchHHHHHHhCCCCCEEEecHH
Confidence 57999999999976442 1123346999999987
No 79
>TIGR02478 6PF1K_euk 6-phosphofructokinase, eukaryotic type. Members of this family are eukaryotic (with one exception) ATP-dependent 6-phosphofructokinases (EC 2.7.1.11) in which two tandem copies of the phosphofructokinase are found. Members are found, often including several isozymes, in animals and fungi and in the bacterium Propionibacterium acnes KPA171202 (a human skin commensal).
Probab=63.73 E-value=1.9 Score=46.09 Aligned_cols=61 Identities=23% Similarity=0.232 Sum_probs=39.2
Q ss_pred cccEEEEEcCCcceEeecccCC-------CCcceeeccCCCCchhHHhhhhhcccc-ccccccchHHhhhcHHHHHHHHh
Q 021432 75 NVDLVVTVGGDGTLLQAGHLID-------DSIPVLGVNSDPTRGEEVDMLSNEFDA-SRSKGYLCAATVNNFEQLLDNIL 146 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~~~~~-------~~~PilGIN~G~~~~~~~~~~~~~~~~-~~~~GfL~~~~~~~~~~~l~~l~ 146 (312)
+.|.+|+||||||+-.+.++.+ .++|++||-. +- -|.... ..++||-+.++. +-++++++.
T Consensus 478 ~Id~LivIGGdgs~~~a~~L~~~~~~~~~~~i~vvgIPk-TI--------DNDi~gtd~t~GfdTA~~~--~~~~id~i~ 546 (745)
T TIGR02478 478 KIDGLLIIGGFEAFEALLQLEQAREKYPAFRIPMVVIPA-TI--------SNNVPGTEYSLGSDTALNE--ITEYCDNIK 546 (745)
T ss_pred CCCEEEEeCChHHHHHHHHHHHHHhhCCCCCccEEEecc-cc--------cCCCCCCccCCCHHHHHHH--HHHHHHHHH
Confidence 5799999999999987765432 3699999932 11 121111 137999888753 344565554
No 80
>PRK06490 glutamine amidotransferase; Provisional
Probab=63.08 E-value=8.4 Score=35.28 Aligned_cols=36 Identities=17% Similarity=0.293 Sum_probs=26.0
Q ss_pred ccccccEEEEEcCCcceEeec-------cc----CCCCcceeeccCC
Q 021432 72 PIRNVDLVVTVGGDGTLLQAG-------HL----IDDSIPVLGVNSD 107 (312)
Q Consensus 72 ~~~~~Dlvi~lGGDGT~L~a~-------~~----~~~~~PilGIN~G 107 (312)
.+.++|.+|+.||-++.-... .. ...++|+|||-.|
T Consensus 49 ~l~~~dgvii~Ggp~~~~d~~~wi~~~~~~i~~~~~~~~PvLGIC~G 95 (239)
T PRK06490 49 TLEDHAGAVIFGGPMSANDPDDFIRREIDWISVPLKENKPFLGICLG 95 (239)
T ss_pred cccccCEEEEECCCCCCCCCchHHHHHHHHHHHHHHCCCCEEEECHh
Confidence 456789999999998763221 11 2357999999988
No 81
>cd00765 Pyrophosphate_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include pyrophosphate-dependent phosphofructokinases. These are found in bacteria as well as plants. These may be dimeric nonallosteric enzymes as in bacteria or allosteric heterotetramers as in plants.
Probab=61.89 E-value=2.2 Score=43.95 Aligned_cols=53 Identities=30% Similarity=0.445 Sum_probs=34.1
Q ss_pred cccEEEEEcCCcceEeecccC------CCCcceeeccCCCCchhHHhhhhhc-cccccccccchHHh
Q 021432 75 NVDLVVTVGGDGTLLQAGHLI------DDSIPVLGVNSDPTRGEEVDMLSNE-FDASRSKGYLCAAT 134 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~~~~------~~~~PilGIN~G~~~~~~~~~~~~~-~~~~~~~GfL~~~~ 134 (312)
+.|.+|++|||||+-.|+++. +.+++|+||-- +-++ ++.+. .+ .+.||=+.+.
T Consensus 166 ~Id~LviIGGddS~~~A~~Lae~~~~~g~~i~VIGVPK-TIDN----Dl~~t~id--~s~GFdTA~k 225 (550)
T cd00765 166 DLDALVVIGGDDSNTNAALLAENFRSKGLKTRVIGVPK-TIDG----DLKNKEIE--TSFGFDTATK 225 (550)
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHHhcCCCceEEEEee-eecC----CCCCCCCC--CCcCHHHHHH
Confidence 579999999999998886543 23489999932 1110 11111 12 3789988765
No 82
>TIGR00566 trpG_papA glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase. This model describes the glutamine amidotransferase domain or peptide of the tryptophan-biosynthetic pathway enzyme anthranilate synthase or of the folate biosynthetic pathway enzyme para-aminobenzoate synthase. In at least one case, a single polypeptide from Bacillus subtilis was shown to have both functions. This model covers a subset of the sequences described by the pfam model GATase.
Probab=59.41 E-value=7.5 Score=34.07 Aligned_cols=33 Identities=30% Similarity=0.341 Sum_probs=24.9
Q ss_pred cccEEEEEcCCcceEeec------ccCCCCcceeeccCC
Q 021432 75 NVDLVVTVGGDGTLLQAG------HLIDDSIPVLGVNSD 107 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~------~~~~~~~PilGIN~G 107 (312)
++|.+|..||-|..-... +.+..++|+|||-.|
T Consensus 43 ~~d~iilsgGpg~p~~~~~~~~~i~~~~~~~PvLGIC~G 81 (188)
T TIGR00566 43 LPLLIVISPGPCTPNEAGISLEAIRHFAGKLPILGVCLG 81 (188)
T ss_pred CCCEEEEcCCCCChhhcchhHHHHHHhccCCCEEEECHH
Confidence 478999999999975532 112347999999988
No 83
>TIGR00888 guaA_Nterm GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit. separate polypeptide chains in most of the Archaea. This N-terminal region would be the smaller subunit.
Probab=58.69 E-value=4.7 Score=35.10 Aligned_cols=58 Identities=21% Similarity=0.240 Sum_probs=32.1
Q ss_pred HHHhhhcCCcceeecccccCCCccc--cccEEEEEcCCcceEee-----ccc-CCCCcceeeccCC
Q 021432 50 CQDILSKKPIEWEPVFRNNLSRPIR--NVDLVVTVGGDGTLLQA-----GHL-IDDSIPVLGVNSD 107 (312)
Q Consensus 50 ~~~~l~~~~~~~~~~~~~~l~~~~~--~~Dlvi~lGGDGT~L~a-----~~~-~~~~~PilGIN~G 107 (312)
+.+.|++.|.++..+..+.-...+. ++|.+|.-||.+..-.. .+. ++.++|++||-.|
T Consensus 14 l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~glii~Gg~~~~~~~~~~~~i~~~~~~~~PilGIC~G 79 (188)
T TIGR00888 14 IARRLRELGVYSELVPNTTPLEEIREKNPKGIILSGGPSSVYAENAPRADEKIFELGVPVLGICYG 79 (188)
T ss_pred HHHHHHHcCCEEEEEeCCCCHHHHhhcCCCEEEECCCCCCcCcCCchHHHHHHHhCCCCEEEECHH
Confidence 3444555665554332111011122 24599999998875421 111 2457999999988
No 84
>PRK07765 para-aminobenzoate synthase component II; Provisional
Probab=57.16 E-value=9.2 Score=34.35 Aligned_cols=35 Identities=31% Similarity=0.396 Sum_probs=25.8
Q ss_pred cccccEEEEEcCCcceEeecc---c----CCCCcceeeccCC
Q 021432 73 IRNVDLVVTVGGDGTLLQAGH---L----IDDSIPVLGVNSD 107 (312)
Q Consensus 73 ~~~~Dlvi~lGGDGT~L~a~~---~----~~~~~PilGIN~G 107 (312)
..++|.+|..||.|..-+... . .+.++|+|||-.|
T Consensus 44 ~~~~dgliisGGp~~~~~~~~~~~~i~~~~~~~~PiLGIC~G 85 (214)
T PRK07765 44 AAQFDGVLLSPGPGTPERAGASIDMVRACAAAGTPLLGVCLG 85 (214)
T ss_pred hcCCCEEEECCCCCChhhcchHHHHHHHHHhCCCCEEEEccC
Confidence 347999999999998643321 1 1347999999988
No 85
>PRK09065 glutamine amidotransferase; Provisional
Probab=56.61 E-value=15 Score=33.44 Aligned_cols=56 Identities=13% Similarity=-0.012 Sum_probs=33.1
Q ss_pred HhhhcCCcceeeccccc--CCCccccccEEEEEcCCcceEee----------ccc-CCCCcceeeccCC
Q 021432 52 DILSKKPIEWEPVFRNN--LSRPIRNVDLVVTVGGDGTLLQA----------GHL-IDDSIPVLGVNSD 107 (312)
Q Consensus 52 ~~l~~~~~~~~~~~~~~--l~~~~~~~Dlvi~lGGDGT~L~a----------~~~-~~~~~PilGIN~G 107 (312)
..+...+++++.+.... ...+..++|.+|+.||-.+.... .+. +..++|+|||-.|
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~p~~~~~dgvvi~Gg~~~~~d~~~w~~~~~~~i~~~~~~~~PvlGIC~G 97 (237)
T PRK09065 29 VALGLAEQPVVVVRVFAGEPLPAPDDFAGVIITGSWAMVTDRLDWSERTADWLRQAAAAGMPLLGICYG 97 (237)
T ss_pred HHhccCCceEEEEeccCCCCCCChhhcCEEEEeCCCcccCCCchhHHHHHHHHHHHHHCCCCEEEEChh
Confidence 34445555554332211 11235688999999998875421 111 2347999999988
No 86
>TIGR01815 TrpE-clade3 anthranilate synthase, alpha proteobacterial clade. This model represents a small clade of anthranilate synthases from alpha proteobacteria and Nostoc (a cyanobacterium). This enzyme is the first step in the pathway for the biosynthesis of tryprophan from chorismate.
Probab=56.28 E-value=6.5 Score=41.91 Aligned_cols=60 Identities=20% Similarity=0.208 Sum_probs=38.8
Q ss_pred HHHHHhhhcCCcceeecccccCCC--ccccccEEEEEcCCcceEee-----cc-cCCCCcceeeccCC
Q 021432 48 NFCQDILSKKPIEWEPVFRNNLSR--PIRNVDLVVTVGGDGTLLQA-----GH-LIDDSIPVLGVNSD 107 (312)
Q Consensus 48 ~~~~~~l~~~~~~~~~~~~~~l~~--~~~~~Dlvi~lGGDGT~L~a-----~~-~~~~~~PilGIN~G 107 (312)
..+.+.|++.|.++..+....... ...++|.||+.||-|+.-.. .+ .+..++|+|||-.|
T Consensus 530 ~~l~~~L~~~G~~v~vv~~~~~~~~~~~~~~DgLILsgGPGsp~d~~~~~~I~~~~~~~iPvLGICLG 597 (717)
T TIGR01815 530 HTLANYLRQTGASVTTLRHSHAEAAFDERRPDLVVLSPGPGRPADFDVAGTIDAALARGLPVFGVCLG 597 (717)
T ss_pred HHHHHHHHHCCCeEEEEECCCChhhhhhcCCCEEEEcCCCCCchhcccHHHHHHHHHCCCCEEEECHH
Confidence 445666777887766553221111 12468999999999996432 11 23457999999988
No 87
>PRK07053 glutamine amidotransferase; Provisional
Probab=54.78 E-value=16 Score=33.24 Aligned_cols=35 Identities=23% Similarity=0.384 Sum_probs=24.5
Q ss_pred cccccEEEEEcCCcceEeec---------c----cCCCCcceeeccCC
Q 021432 73 IRNVDLVVTVGGDGTLLQAG---------H----LIDDSIPVLGVNSD 107 (312)
Q Consensus 73 ~~~~Dlvi~lGGDGT~L~a~---------~----~~~~~~PilGIN~G 107 (312)
..++|.+|+.||-...-... . .++.++|++||-.|
T Consensus 45 ~~~~d~lii~Ggp~~~~d~~~~p~~~~~~~~i~~~~~~~~PvlGIC~G 92 (234)
T PRK07053 45 ALEPDLLVVLGGPIGVYDDELYPFLAPEIALLRQRLAAGLPTLGICLG 92 (234)
T ss_pred ccCCCEEEECCCCCCCCCCCcCCcHHHHHHHHHHHHHCCCCEEEECcc
Confidence 45789999999876543221 1 12357999999998
No 88
>PRK00758 GMP synthase subunit A; Validated
Probab=54.75 E-value=7.9 Score=33.55 Aligned_cols=56 Identities=16% Similarity=0.280 Sum_probs=30.5
Q ss_pred HHhhhcCCcceeecccccCCCccccc-cEEEEEcCCcceEee---cccC-CCCcceeeccCC
Q 021432 51 QDILSKKPIEWEPVFRNNLSRPIRNV-DLVVTVGGDGTLLQA---GHLI-DDSIPVLGVNSD 107 (312)
Q Consensus 51 ~~~l~~~~~~~~~~~~~~l~~~~~~~-Dlvi~lGGDGT~L~a---~~~~-~~~~PilGIN~G 107 (312)
.+.|++.|.++..+..+.-...+.+. |.+|.-||.. +-.. ...+ +.++|++||-.|
T Consensus 16 ~~~l~~~g~~~~~~~~~~~~~~l~~~~dgivi~Gg~~-~~~~~~~~~~l~~~~~PilGIC~G 76 (184)
T PRK00758 16 HRTLRYLGVDAKIIPNTTPVEEIKAFEDGLILSGGPD-IERAGNCPEYLKELDVPILGICLG 76 (184)
T ss_pred HHHHHHcCCcEEEEECCCCHHHHhhcCCEEEECCCCC-hhhccccHHHHHhCCCCEEEEeHH
Confidence 33444555555443311111123455 9999999873 3111 1223 347999999988
No 89
>PRK13527 glutamine amidotransferase subunit PdxT; Provisional
Probab=54.21 E-value=5 Score=35.45 Aligned_cols=58 Identities=21% Similarity=0.327 Sum_probs=34.0
Q ss_pred HHHHhhhcCCcceeecccccCCCccccccEEEEEcCCcceEe----------ecc-cCCCCcceeeccCC
Q 021432 49 FCQDILSKKPIEWEPVFRNNLSRPIRNVDLVVTVGGDGTLLQ----------AGH-LIDDSIPVLGVNSD 107 (312)
Q Consensus 49 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~Dlvi~lGGDGT~L~----------a~~-~~~~~~PilGIN~G 107 (312)
.+.+.|+..|.+++...... ...+.++|.+|.-||-++... ..+ ....++|++||-.|
T Consensus 18 ~~~~~l~~~g~~~~~~~~~~-~~~l~~~d~iii~GG~~~~~~~~~~~~~~~~~i~~~~~~~~pilGIC~G 86 (200)
T PRK13527 18 ALKRALDELGIDGEVVEVRR-PGDLPDCDALIIPGGESTTIGRLMKREGILDEIKEKIEEGLPILGTCAG 86 (200)
T ss_pred HHHHHHHhcCCCeEEEEeCC-hHHhccCCEEEECCCcHHHHHHHHhhccHHHHHHHHHHCCCeEEEECHH
Confidence 34444555665444332221 123567999999999887521 111 12357899999888
No 90
>PTZ00468 phosphofructokinase family protein; Provisional
Probab=53.31 E-value=3.8 Score=46.06 Aligned_cols=31 Identities=29% Similarity=0.416 Sum_probs=24.8
Q ss_pred cccEEEEEcCCcceEeecccC------CCCcceeecc
Q 021432 75 NVDLVVTVGGDGTLLQAGHLI------DDSIPVLGVN 105 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~~~~------~~~~PilGIN 105 (312)
+.|.+|++|||||+-.|+++. +.+++++||-
T Consensus 196 ~Id~LVvIGGDgS~t~A~~LaEy~~~~g~~I~VIGIP 232 (1328)
T PTZ00468 196 KLHGLVVIGGDDSNTNAAVLAEYFKRNSSSTVVVGCP 232 (1328)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHHhcCCCeeEEEEe
Confidence 679999999999998886543 2358999993
No 91
>PF02233 PNTB: NAD(P) transhydrogenase beta subunit; InterPro: IPR012136 NAD(P) transhydrogenase catalyses the transfer of reducing equivalents between NAD(H) and NADP(H), coupled to the translocation of protons across a membrane []. It is an integral membrane protein found in most organisms except for yeasts, plants and some bacterial species. In bacterial species it is located in the cytoplasmic membrane, while in mitochondria it is located in the inner membrane. Under most physiological conditions this enzyme synthesises NADPH, driven by consumption of the proton electrochemical gradient. The resulting NADPH is subsequently used for biosynthetic reactions or the reduction of glutathione. The global structure of this enzyme is similar in all organisms, consisting of three distinct domains, though the polypeptide composition can vary. Domain I binds NAD(+)/NADH, domain II is a hydrophobic membrane-spanning domain, and domain III binds NADP(+)/NADPH. Domain I is composed of two subdomains, both of which form a Rossman fold, while domain III consists of a single Rossman fold where the NADP(+) is flipped relative to the normal orientation of bound nucleotides within the Rossman fold [, , ]. Several residues within these domains are thought to make functionally important interdomain contacts for hydride transfer between these domains []. Proton translocation occurs through domain II and is thought to induce conformational changes which are transmitted across domain III to the site of hydride transfer between domains I and III. This entry represents the beta subunit found in bacterial two-subunit NADP(H) transhydrogenases. This subunit forms domain III and part of the transmembrane domain II. ; GO: 0008750 NAD(P)+ transhydrogenase (AB-specific) activity, 0050661 NADP binding, 0055114 oxidation-reduction process, 0016021 integral to membrane; PDB: 1PT9_A 1DJL_A 1U31_B 2BRU_C 1PTJ_C 1HZZ_C 2FRD_C 2FSV_C 1XLT_C 1U2G_C ....
Probab=53.23 E-value=5.8 Score=40.00 Aligned_cols=49 Identities=16% Similarity=0.359 Sum_probs=27.9
Q ss_pred hhcCCcceeec-ccccCCCccccccEEEEEcCCcceEeecccCCCCcceee
Q 021432 54 LSKKPIEWEPV-FRNNLSRPIRNVDLVVTVGGDGTLLQAGHLIDDSIPVLG 103 (312)
Q Consensus 54 l~~~~~~~~~~-~~~~l~~~~~~~Dlvi~lGGDGT~L~a~~~~~~~~PilG 103 (312)
|.+.++.++.+ +-+++..+++++|+++++|=--|+=-+++.-+ +.||-|
T Consensus 360 LAEa~VpYd~~~emdeiN~~f~~~Dv~lViGANDvVNPaA~~d~-~SpI~G 409 (463)
T PF02233_consen 360 LAEANVPYDIVKEMDEINPDFPDTDVVLVIGANDVVNPAAREDP-NSPIYG 409 (463)
T ss_dssp HHHCT--GGGEEEHHHHGGGGGG-SEEEEES-SGGG-CHHCCST-TSTTTT
T ss_pred EEecCCCHHHHhhhhhcccchhcCCEEEEeccccccCchhccCC-CCCCCC
Confidence 33444444422 23455567899999999999999988887532 344433
No 92
>PRK06186 hypothetical protein; Validated
Probab=51.40 E-value=7.5 Score=35.62 Aligned_cols=36 Identities=25% Similarity=0.339 Sum_probs=27.5
Q ss_pred ccccccEEEEEcCCcc-----eEeecccC-CCCcceeeccCC
Q 021432 72 PIRNVDLVVTVGGDGT-----LLQAGHLI-DDSIPVLGVNSD 107 (312)
Q Consensus 72 ~~~~~Dlvi~lGGDGT-----~L~a~~~~-~~~~PilGIN~G 107 (312)
.++++|-|++.||=|. .+.+++++ ..++|+|||-.|
T Consensus 50 ~l~~~dgilvpgGfg~rg~~Gki~ai~~Are~~iP~LGIClG 91 (229)
T PRK06186 50 DLAGFDGIWCVPGSPYRNDDGALTAIRFARENGIPFLGTCGG 91 (229)
T ss_pred hHhhCCeeEeCCCCCcccHhHHHHHHHHHHHcCCCeEeechh
Confidence 4678999999999775 23344543 368999999988
No 93
>PF13685 Fe-ADH_2: Iron-containing alcohol dehydrogenase; PDB: 3CE9_C.
Probab=50.93 E-value=6.5 Score=36.42 Aligned_cols=62 Identities=23% Similarity=0.423 Sum_probs=35.5
Q ss_pred HHHHHHhhhcCCcceeecc----ccc------CCCcc--ccccEEEEEcCCcceEeecccC--CCCcceeeccCCCC
Q 021432 47 INFCQDILSKKPIEWEPVF----RNN------LSRPI--RNVDLVVTVGGDGTLLQAGHLI--DDSIPVLGVNSDPT 109 (312)
Q Consensus 47 ~~~~~~~l~~~~~~~~~~~----~~~------l~~~~--~~~Dlvi~lGGDGT~L~a~~~~--~~~~PilGIN~G~~ 109 (312)
.+.+++.|+..|+++..+. ..+ +...+ .++|++|.+|| ||+.-.+|+. ..++|++-|-+-+.
T Consensus 35 g~~v~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~vGg-G~i~D~~K~~A~~~~~p~isVPTa~S 110 (250)
T PF13685_consen 35 GEKVEESLKSAGIEVAVIEEFVGDADEDEVEKLVEALRPKDADLIIGVGG-GTIIDIAKYAAFELGIPFISVPTAAS 110 (250)
T ss_dssp HHHHHHHHHTTT-EEEEEE-EE---BHHHHHHHHTTS--TT--EEEEEES-HHHHHHHHHHHHHHT--EEEEES--S
T ss_pred HHHHHHHHHHcCCeEEEEecCCCCCCHHHHHHHHHHhcccCCCEEEEeCC-cHHHHHHHHHHHhcCCCEEEeccccc
Confidence 3456666777776655332 111 11122 48899999999 9999998874 35799999977653
No 94
>cd01744 GATase1_CPSase Small chain of the glutamine-dependent form of carbamoyl phosphate synthase, CPSase II. This group of sequences represents the small chain of the glutamine-dependent form of carbamoyl phosphate synthase, CPSase II. CPSase II catalyzes the production of carbomyl phosphate (CP) from bicarbonate, glutamine and two molecules of MgATP. The reaction is believed to proceed by a series of four biochemical reactions involving a minimum of three discrete highly reactive intermediates. The synthesis of CP is critical for the initiation of two separate biosynthetic pathways. In one CP is coupled to aspartate, its carbon and nitrogen nuclei ultimately incorporated into the aromatic moieties of pyrimidine nucleotides. In the second pathway CP is condensed with ornithine at the start of the urea cycle and is utilized for the detoxification of ammonia and biosynthesis of arginine. CPSases may be encoded by one or by several genes, depending on the species. The E.coli enzyme is
Probab=50.43 E-value=8.9 Score=33.14 Aligned_cols=34 Identities=21% Similarity=0.329 Sum_probs=24.1
Q ss_pred ccccEEEEEcCCcceEee------cc-cCCCCcceeeccCC
Q 021432 74 RNVDLVVTVGGDGTLLQA------GH-LIDDSIPVLGVNSD 107 (312)
Q Consensus 74 ~~~Dlvi~lGGDGT~L~a------~~-~~~~~~PilGIN~G 107 (312)
.++|.+|..||.|+.-+. .+ ..+.++|++||-.|
T Consensus 38 ~~~dgiil~GG~~~~~~~~~~~~~~~~~~~~~~PvlGIC~G 78 (178)
T cd01744 38 LDPDGIFLSNGPGDPALLDEAIKTVRKLLGKKIPIFGICLG 78 (178)
T ss_pred cCCCEEEECCCCCChhHhHHHHHHHHHHHhCCCCEEEECHH
Confidence 468999999998764331 11 12456999999988
No 95
>PRK10310 PTS system galactitol-specific transporter subunit IIB; Provisional
Probab=50.04 E-value=37 Score=26.34 Aligned_cols=34 Identities=18% Similarity=0.222 Sum_probs=17.5
Q ss_pred HHHHHhhhcCCcceeecc--cccCCCccccccEEEE
Q 021432 48 NFCQDILSKKPIEWEPVF--RNNLSRPIRNVDLVVT 81 (312)
Q Consensus 48 ~~~~~~l~~~~~~~~~~~--~~~l~~~~~~~Dlvi~ 81 (312)
..+++.++++|++.+... ..++.....++|++++
T Consensus 21 ~ki~~~l~~~gi~~~v~~~~~~e~~~~~~~~D~iv~ 56 (94)
T PRK10310 21 EEIKELCQSHNIPVELIQCRVNEIETYMDGVHLICT 56 (94)
T ss_pred HHHHHHHHHCCCeEEEEEecHHHHhhhcCCCCEEEE
Confidence 445566666666544322 1223223467887765
No 96
>PRK05637 anthranilate synthase component II; Provisional
Probab=49.91 E-value=6.1 Score=35.41 Aligned_cols=33 Identities=42% Similarity=0.637 Sum_probs=24.9
Q ss_pred cccEEEEEcCCcceEeec---ccCC---CCcceeeccCC
Q 021432 75 NVDLVVTVGGDGTLLQAG---HLID---DSIPVLGVNSD 107 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~---~~~~---~~~PilGIN~G 107 (312)
++|.||..||-|..-.+. ..++ .++|+|||-.|
T Consensus 44 ~~~~iIlsgGPg~~~d~~~~~~li~~~~~~~PiLGIClG 82 (208)
T PRK05637 44 NPDLICLSPGPGHPRDAGNMMALIDRTLGQIPLLGICLG 82 (208)
T ss_pred CCCEEEEeCCCCCHHHhhHHHHHHHHHhCCCCEEEEcHH
Confidence 679999999999985541 2222 36999999988
No 97
>PRK13181 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional
Probab=49.26 E-value=9.6 Score=33.54 Aligned_cols=53 Identities=23% Similarity=0.270 Sum_probs=29.2
Q ss_pred HHhhhcCCcceeecccccCCCccccccEEEEEcCCcce------------Eeecc-cCCCCcceeeccCC
Q 021432 51 QDILSKKPIEWEPVFRNNLSRPIRNVDLVVTVGGDGTL------------LQAGH-LIDDSIPVLGVNSD 107 (312)
Q Consensus 51 ~~~l~~~~~~~~~~~~~~l~~~~~~~Dlvi~lGGDGT~------------L~a~~-~~~~~~PilGIN~G 107 (312)
.+.|+..|+++..+.. ...+.++|.+|. +|-|.. ....+ ....++|+|||-.|
T Consensus 16 ~~~l~~~g~~v~~~~~---~~~l~~~d~lil-pG~g~~~~~~~~l~~~~~~~~i~~~~~~~~PvlGiC~G 81 (199)
T PRK13181 16 ANALKRLGVEAVVSSD---PEEIAGADKVIL-PGVGAFGQAMRSLRESGLDEALKEHVEKKQPVLGICLG 81 (199)
T ss_pred HHHHHHCCCcEEEEcC---hHHhccCCEEEE-CCCCCHHHHHHHHHHCChHHHHHHHHHCCCCEEEECHh
Confidence 3345556665544311 123567999885 554442 11111 12457999999887
No 98
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=48.01 E-value=3.8 Score=34.60 Aligned_cols=35 Identities=26% Similarity=0.424 Sum_probs=23.8
Q ss_pred CCCccccccEEEEEcCCcceEeecccCCCCcceeeccC
Q 021432 69 LSRPIRNVDLVVTVGGDGTLLQAGHLIDDSIPVLGVNS 106 (312)
Q Consensus 69 l~~~~~~~Dlvi~lGGDGT~L~a~~~~~~~~PilGIN~ 106 (312)
+.+.+..+|+||+=||=||+..+... ++|.+-|-.
T Consensus 66 m~~~m~~aDlvIs~aG~~Ti~E~l~~---g~P~I~ip~ 100 (167)
T PF04101_consen 66 MAELMAAADLVISHAGAGTIAEALAL---GKPAIVIPL 100 (167)
T ss_dssp HHHHHHHHSEEEECS-CHHHHHHHHC---T--EEEE--
T ss_pred HHHHHHHcCEEEeCCCccHHHHHHHc---CCCeeccCC
Confidence 44467899999999999999888663 578766643
No 99
>PRK13566 anthranilate synthase; Provisional
Probab=45.62 E-value=14 Score=39.44 Aligned_cols=60 Identities=20% Similarity=0.187 Sum_probs=37.5
Q ss_pred HHHHHhhhcCCcceeecccccCCC--ccccccEEEEEcCCcceEe-----eccc-CCCCcceeeccCC
Q 021432 48 NFCQDILSKKPIEWEPVFRNNLSR--PIRNVDLVVTVGGDGTLLQ-----AGHL-IDDSIPVLGVNSD 107 (312)
Q Consensus 48 ~~~~~~l~~~~~~~~~~~~~~l~~--~~~~~Dlvi~lGGDGT~L~-----a~~~-~~~~~PilGIN~G 107 (312)
..+.+.|++.|.++..+..+.-.. ...++|.||..||-|+.-. ..+. ++.++|||||-.|
T Consensus 540 ~~l~~~Lr~~G~~v~vv~~~~~~~~~~~~~~DgVVLsgGpgsp~d~~~~~lI~~a~~~~iPILGIClG 607 (720)
T PRK13566 540 HTLANYFRQTGAEVTTVRYGFAEEMLDRVNPDLVVLSPGPGRPSDFDCKATIDAALARNLPIFGVCLG 607 (720)
T ss_pred HHHHHHHHHCCCEEEEEECCCChhHhhhcCCCEEEECCCCCChhhCCcHHHHHHHHHCCCcEEEEehh
Confidence 345666777777766543322111 2246899999999987421 1122 2457999999988
No 100
>KOG1169 consensus Diacylglycerol kinase [Lipid transport and metabolism; Signal transduction mechanisms]
Probab=45.08 E-value=19 Score=37.71 Aligned_cols=35 Identities=29% Similarity=0.180 Sum_probs=23.9
Q ss_pred eecceEEEcCcceEEEeecCCeEEEccCCCeeeeecCC
Q 021432 271 CKEGFVYIDGSHVFVSIQNGDVIEISSKAPALKVFLPP 308 (312)
Q Consensus 271 ~~~~~l~iDG~~~~~~l~~gd~v~I~~s~~~~~l~~~~ 308 (312)
.+..-+-+||+.. .++=-+|+|+...+..-|..++
T Consensus 587 ~k~~PMQiDGEPW---~Q~p~tI~Ithk~q~~mL~~~~ 621 (634)
T KOG1169|consen 587 KKTFPMQIDGEPW---MQPPCTIEITHKNQAPMLMKAA 621 (634)
T ss_pred ccCcceecCCccc---cCCCceEEEEecchHhhhhccc
Confidence 3456678999863 3444558898877776666665
No 101
>cd00764 Eukaryotic_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include eukaryotic ATP-dependent phosphofructokinases. These have evolved from the bacterial PFKs by gene duplication and fusion events and exhibit complex allosteric behavior.
Probab=44.52 E-value=6.8 Score=42.00 Aligned_cols=19 Identities=37% Similarity=0.707 Sum_probs=16.4
Q ss_pred ccccEEEEEcCCcceEeec
Q 021432 74 RNVDLVVTVGGDGTLLQAG 92 (312)
Q Consensus 74 ~~~Dlvi~lGGDGT~L~a~ 92 (312)
.+.|.+|++|||||+-.|.
T Consensus 96 ~~Id~LvvIGGdgSl~gA~ 114 (762)
T cd00764 96 RGITNLCVIGGDGSLTGAD 114 (762)
T ss_pred cCCCEEEEeCCchHHHHHH
Confidence 3679999999999997775
No 102
>PRK08007 para-aminobenzoate synthase component II; Provisional
Probab=44.08 E-value=14 Score=32.37 Aligned_cols=33 Identities=27% Similarity=0.337 Sum_probs=24.8
Q ss_pred cccEEEEEcCCcceEeec------ccCCCCcceeeccCC
Q 021432 75 NVDLVVTVGGDGTLLQAG------HLIDDSIPVLGVNSD 107 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~------~~~~~~~PilGIN~G 107 (312)
++|.||.-||=|+.-... +.+..++|+|||-.|
T Consensus 43 ~~d~iils~GPg~p~~~~~~~~~~~~~~~~~PiLGIClG 81 (187)
T PRK08007 43 KPQKIVISPGPCTPDEAGISLDVIRHYAGRLPILGVCLG 81 (187)
T ss_pred CCCEEEEcCCCCChHHCCccHHHHHHhcCCCCEEEECHH
Confidence 579999999998765542 223357999999987
No 103
>PRK10586 putative oxidoreductase; Provisional
Probab=43.80 E-value=18 Score=35.23 Aligned_cols=80 Identities=11% Similarity=0.155 Sum_probs=46.3
Q ss_pred ccchhHHHhhhhhhh----------hhhhhHHHHHHhhhcCCcceeeccc----ccCCC----ccccccEEEEEcCCcce
Q 021432 27 ITNPLILQHLENRCK----------VHKDAINFCQDILSKKPIEWEPVFR----NNLSR----PIRNVDLVVTVGGDGTL 88 (312)
Q Consensus 27 ~~~~~~~~~l~~~~~----------~~~~~~~~~~~~l~~~~~~~~~~~~----~~l~~----~~~~~Dlvi~lGGDGT~ 88 (312)
....++-+++++.+. ........+...|++.++.+..+.. +++.+ .-.++|+||.+|| |..
T Consensus 20 ga~~~l~~~~~~~g~~~~lvv~g~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~v~~l~~~~~~~~d~iiavGG-Gs~ 98 (362)
T PRK10586 20 GSIDHLHDFFTDEQLSRAVWIYGERAIAAAQPYLPPAFELPGAKHILFRGHCSESDVAQLAAASGDDRQVVIGVGG-GAL 98 (362)
T ss_pred CHHHHHHHHHHhcCCCeEEEEEChHHHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHhccCCCEEEEecC-cHH
Confidence 345666677776551 1111223445567776665542211 11111 1136799999998 788
Q ss_pred EeecccC--CCCcceeeccCC
Q 021432 89 LQAGHLI--DDSIPVLGVNSD 107 (312)
Q Consensus 89 L~a~~~~--~~~~PilGIN~G 107 (312)
+-+++.+ ...+|++.|.+-
T Consensus 99 iD~aK~~a~~~~~p~i~vPT~ 119 (362)
T PRK10586 99 LDTAKALARRLGLPFVAIPTI 119 (362)
T ss_pred HHHHHHHHhhcCCCEEEEeCC
Confidence 8887754 246899999864
No 104
>TIGR03800 PLP_synth_Pdx2 pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2. Pyridoxal 5'-phosphate (PLP) is synthesized by the PdxA/PdxJ pathway in some species (mostly within the gamma subdivision of the proteobacteria) and by the Pdx1/Pdx2 pathway in most other organisms. This family describes Pdx2, the glutaminase subunit of the PLP synthase.
Probab=42.90 E-value=8 Score=33.90 Aligned_cols=53 Identities=25% Similarity=0.357 Sum_probs=34.7
Q ss_pred HhhhcCCcceeecccccCCCccccccEEEEEcCCcceEe----ec------c-cCCCCcceeeccCC
Q 021432 52 DILSKKPIEWEPVFRNNLSRPIRNVDLVVTVGGDGTLLQ----AG------H-LIDDSIPVLGVNSD 107 (312)
Q Consensus 52 ~~l~~~~~~~~~~~~~~l~~~~~~~Dlvi~lGGDGT~L~----a~------~-~~~~~~PilGIN~G 107 (312)
+.|++.|.++..+.. ...++++|.+|.-||.++... .. + ....++|++||-.|
T Consensus 16 ~~l~~~g~~~~~v~~---~~~l~~~d~liipGG~~~~~~~l~~~~~l~~~i~~~~~~g~pilGIC~G 79 (184)
T TIGR03800 16 RALEALGVEGVEVKR---PEQLDEIDGLIIPGGESTTLSRLLDKYGMFEPLRNFILSGLPVFGTCAG 79 (184)
T ss_pred HHHHHCCCEEEEECC---hHHhccCCEEEECCCCHHHHHHHHHhccHHHHHHHHHHcCCcEEEECHH
Confidence 455567776655432 123568999999999988622 11 1 12357999999988
No 105
>PRK09444 pntB pyridine nucleotide transhydrogenase; Provisional
Probab=40.71 E-value=7 Score=39.22 Aligned_cols=28 Identities=18% Similarity=0.381 Sum_probs=23.4
Q ss_pred ccCCCccccccEEEEEcCCcceEeeccc
Q 021432 67 NNLSRPIRNVDLVVTVGGDGTLLQAGHL 94 (312)
Q Consensus 67 ~~l~~~~~~~Dlvi~lGGDGT~L~a~~~ 94 (312)
++++.+++++|+++++|=--|+--+++.
T Consensus 373 deIN~~F~~tDvalVIGANDvVNPaA~~ 400 (462)
T PRK09444 373 DEINDDFADTDTVLVIGANDTVNPAAQE 400 (462)
T ss_pred HhhccccccCCEEEEecCccCCCccccc
Confidence 4455578899999999999999888875
No 106
>PRK08250 glutamine amidotransferase; Provisional
Probab=40.34 E-value=45 Score=30.32 Aligned_cols=36 Identities=22% Similarity=0.306 Sum_probs=24.3
Q ss_pred ccccccEEEEEcCCcceEe------------e---cc-cCCCCcceeeccCC
Q 021432 72 PIRNVDLVVTVGGDGTLLQ------------A---GH-LIDDSIPVLGVNSD 107 (312)
Q Consensus 72 ~~~~~Dlvi~lGGDGT~L~------------a---~~-~~~~~~PilGIN~G 107 (312)
...++|.+|+.||-.+.-. . .+ .+..++|++||-.|
T Consensus 42 ~~~~~d~vii~GGp~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~PvlGIC~G 93 (235)
T PRK08250 42 NADGFDLLIVMGGPQSPRTTREECPYFDSKAEQRLINQAIKAGKAVIGVCLG 93 (235)
T ss_pred CccccCEEEECCCCCChhhccccccccchHHHHHHHHHHHHcCCCEEEEChh
Confidence 3567999999999555211 0 11 12357999999988
No 107
>PF00117 GATase: Glutamine amidotransferase class-I; InterPro: IPR017926 Glutamine amidotransferase (GATase) enzymes catalyse the removal of the ammonia group from glutamine and then transfer this group to a substrate to form a new carbon-nitrogen group []. The GATase domain exists either as a separate polypeptidic subunit or as part of a larger polypeptide fused in different ways to a synthase domain. Two classes of GATase domains have been identified [, ]: class-I (also known as trpG-type or triad) and class-II (also known as purF-type or Ntn). Class-I (or type 1) GATase domains have been found in the following enzymes: The second component of anthranilate synthase (AS) []. AS catalyzes the biosynthesis of anthranilate from chorismate and glutamine. AS is generally a dimeric enzyme: the first component can synthesize anthranilate using ammonia rather than glutamine, whereas component II provides the GATase activity []. In some bacteria and in fungi the GATase component of AS is part of a multifunctional protein that also catalyzes other steps of the biosynthesis of tryptophan. The second component of 4-amino-4-deoxychorismate (ADC) synthase, a dimeric prokaryotic enzyme that functions in the pathway that catalyzes the biosynthesis of para-aminobenzoate (PABA) from chorismate and glutamine. The second component (gene pabA) provides the GATase activity []. CTP synthase. CTP synthase catalyzes the final reaction in the biosynthesis of pyrimidine, the ATP-dependent formation of CTP from UTP and glutamine. CTP synthase is a single chain enzyme that contains two distinct domains; the GATase domain is in the C-terminal section []. GMP synthase (glutamine-hydrolyzing). GMP synthase catalyzes the ATP-dependent formation of GMP from xanthosine 5'-phosphate and glutamine. GMP synthase is a single chain enzyme that contains two distinct domains; the GATase domain is in the N-terminal section [, ]. Glutamine-dependent carbamoyl-phosphate synthase (GD-CPSase); an enzyme involved in both arginine and pyrimidine biosynthesis and which catalyzes the ATP-dependent formation of carbamoyl phosphate from glutamine and carbon dioxide. In bacteria GD-CPSase is composed of two subunits: the large chain (gene carB) provides the CPSase activity, while the small chain (gene carA) provides the GATase activity. In yeast the enzyme involved in arginine biosynthesis is also composed of two subunits: CPA1 (GATase), and CPA2 (CPSase). In most eukaryotes, the first three steps of pyrimidine biosynthesis are catalyzed by a large multifunctional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals). The GATase domain is located at the N-terminal extremity of this polyprotein []. Phosphoribosylformylglycinamidine synthase, an enzyme that catalyzes the fourth step in the de novo biosynthesis of purines. In some species of bacteria and rchaea, FGAM synthase II is composed of two subunits: a small chain (gene purQ) which provides the GATase activity and a large chain (gene purL) which provides the aminator activity. In eukaryotes and Gram-negative bacteria a single polypeptide (large type of purL) contains a FGAM synthethase domain and the GATase as the C-terminal domain []. Imidazole glycerol phosphate synthase subunit hisH, an enzyme that catalyzes the fifth step in the biosynthesis of histidine. A triad of conserved Cys-His-Glu forms the active site, wherein the catalytic cysteine is essential for the amidotransferase activity [, ]. Different structures show that the active site Cys of type 1 GATase is located at the tip of a nucleophile elbow.; PDB: 1I7S_D 1I7Q_D 3UOW_B 1GPM_C 1O1Y_A 2VXO_A 2VPI_B 1OX5_B 1OX6_B 1OX4_B ....
Probab=40.12 E-value=6.1 Score=34.20 Aligned_cols=60 Identities=20% Similarity=0.244 Sum_probs=38.1
Q ss_pred HHHHHhhhcCCcceeecccccC-CC---ccccccEEEEEcCCcceEee------ccc-CCCCcceeeccCC
Q 021432 48 NFCQDILSKKPIEWEPVFRNNL-SR---PIRNVDLVVTVGGDGTLLQA------GHL-IDDSIPVLGVNSD 107 (312)
Q Consensus 48 ~~~~~~l~~~~~~~~~~~~~~l-~~---~~~~~Dlvi~lGGDGT~L~a------~~~-~~~~~PilGIN~G 107 (312)
..+.+.+++.+++++.+..+.. .. ...++|.+|+.||=|..-.. .+. ...++|+|||-.|
T Consensus 11 ~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~d~iii~Gg~~~~~d~~~~~~~i~~~~~~~~PilGIC~G 81 (192)
T PF00117_consen 11 HSLVRALRELGIDVEVVRVDSDFEEPLEDLDDYDGIIISGGPGSPYDIEGLIELIREARERKIPILGICLG 81 (192)
T ss_dssp HHHHHHHHHTTEEEEEEETTGGHHHHHHHTTTSSEEEEECESSSTTSHHHHHHHHHHHHHTTSEEEEETHH
T ss_pred HHHHHHHHHCCCeEEEEECCCchhhhhhhhcCCCEEEECCcCCccccccccccccccccccceEEEEEeeh
Confidence 4455666677766655433321 11 25689999999998876631 121 2357999999887
No 108
>PRK13152 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional
Probab=39.96 E-value=16 Score=32.20 Aligned_cols=54 Identities=15% Similarity=0.143 Sum_probs=31.1
Q ss_pred HHHhhhcCCcceeecccccCCCccccccEEEEEcCCcceEeec-------------cc-CCCCcceeeccCC
Q 021432 50 CQDILSKKPIEWEPVFRNNLSRPIRNVDLVVTVGGDGTLLQAG-------------HL-IDDSIPVLGVNSD 107 (312)
Q Consensus 50 ~~~~l~~~~~~~~~~~~~~l~~~~~~~Dlvi~lGGDGT~L~a~-------------~~-~~~~~PilGIN~G 107 (312)
+.+.|++.+.++..+...+ .+.++|.+|. -|-|++-.+. +. ++.++|+|||-.|
T Consensus 15 v~~~l~~~g~~~~~~~~~~---~l~~~d~lil-PG~g~~~~~~~~l~~~~~~~~l~~~~~~~~~pvlGiC~G 82 (201)
T PRK13152 15 VAKAFEKIGAINFIAKNPK---DLQKADKLLL-PGVGSFKEAMKNLKELGFIEALKEQVLVQKKPILGICLG 82 (201)
T ss_pred HHHHHHHCCCeEEEECCHH---HHcCCCEEEE-CCCCchHHHHHHHHHcCcHHHHHHHHHhCCCcEEEECHh
Confidence 3344555565544432211 2456897766 8877753321 11 2457999999988
No 109
>cd01740 GATase1_FGAR_AT Type 1 glutamine amidotransferase (GATase1)-like domain found in Formylglycinamide ribonucleotide amidotransferase. Type 1 glutamine amidotransferase (GATase1)-like domain found in Formylglycinamide ribonucleotide amidotransferase (FGAR-AT). FGAR-AT catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, Pi, and glutamate in the fourth step of the purine biosynthetic pathway. FGAR-AT is a glutamine amidotransferase. Glutamine amidotransferase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. FGAR-AT belongs to the triad family of amidotransferases having a conserved Cys-His-Glu catalytic triad in the glutaminase active site
Probab=39.81 E-value=18 Score=32.88 Aligned_cols=58 Identities=24% Similarity=0.287 Sum_probs=33.9
Q ss_pred HHHhhhcCCcceeecccccC---CCccccccEEEEEcCCc--ceEe-------------ecc-cCCCCcceeeccCC
Q 021432 50 CQDILSKKPIEWEPVFRNNL---SRPIRNVDLVVTVGGDG--TLLQ-------------AGH-LIDDSIPVLGVNSD 107 (312)
Q Consensus 50 ~~~~l~~~~~~~~~~~~~~l---~~~~~~~Dlvi~lGGDG--T~L~-------------a~~-~~~~~~PilGIN~G 107 (312)
....|+..|+++..+...+. ...++++|.+|.-||-. .-++ ..+ +.+.++|++||-.|
T Consensus 15 ~~~al~~aG~~v~~v~~~~~~~~~~~l~~~d~liipGG~~~~d~l~~~~~~~~~~~~~~~l~~~~~~g~pvlGIC~G 91 (238)
T cd01740 15 MAYAFELAGFEAEDVWHNDLLAGRKDLDDYDGVVLPGGFSYGDYLRAGAIAAASPLLMEEVKEFAERGGLVLGICNG 91 (238)
T ss_pred HHHHHHHcCCCEEEEeccCCccccCCHhhCCEEEECCCCCcccccccccccccChhHHHHHHHHHhCCCeEEEECcH
Confidence 34445556665554433222 11357899999999943 2222 112 23457999999988
No 110
>PF03698 UPF0180: Uncharacterised protein family (UPF0180); InterPro: IPR005370 The members of this family are small uncharacterised proteins.
Probab=38.78 E-value=63 Score=24.68 Aligned_cols=50 Identities=22% Similarity=0.353 Sum_probs=30.1
Q ss_pred HHHHhhhcCCcceeecccccCCCccccccEEEEEcCCcceEeecccCCCCccee
Q 021432 49 FCQDILSKKPIEWEPVFRNNLSRPIRNVDLVVTVGGDGTLLQAGHLIDDSIPVL 102 (312)
Q Consensus 49 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~Dlvi~lGGDGT~L~a~~~~~~~~Pil 102 (312)
.+++.|++.|.++..+.-. .+.+++|++|+=|.|--++...... ...||+
T Consensus 12 ~v~~~L~~~GyeVv~l~~~---~~~~~~daiVvtG~~~n~mg~~d~~-~~~pVI 61 (80)
T PF03698_consen 12 NVKEALREKGYEVVDLENE---QDLQNVDAIVVTGQDTNMMGIQDTS-TKVPVI 61 (80)
T ss_pred HHHHHHHHCCCEEEecCCc---cccCCcCEEEEECCCcccccccccc-cCceEE
Confidence 3455566666655433211 1356899999999887776554322 246775
No 111
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=37.47 E-value=46 Score=31.90 Aligned_cols=17 Identities=35% Similarity=0.800 Sum_probs=14.7
Q ss_pred cEEEEEcCCcceEeecc
Q 021432 77 DLVVTVGGDGTLLQAGH 93 (312)
Q Consensus 77 Dlvi~lGGDGT~L~a~~ 93 (312)
.+||++|+||.++-...
T Consensus 217 ~ViVSlG~~Gal~~~~~ 233 (310)
T COG1105 217 NVIVSLGADGALLVTAE 233 (310)
T ss_pred EEEEEecCcccEEEccC
Confidence 36999999999998864
No 112
>PRK05665 amidotransferase; Provisional
Probab=34.63 E-value=55 Score=29.94 Aligned_cols=37 Identities=16% Similarity=0.174 Sum_probs=25.0
Q ss_pred CccccccEEEEEcCCcceEeec----------c-cCCCCcceeeccCC
Q 021432 71 RPIRNVDLVVTVGGDGTLLQAG----------H-LIDDSIPVLGVNSD 107 (312)
Q Consensus 71 ~~~~~~Dlvi~lGGDGT~L~a~----------~-~~~~~~PilGIN~G 107 (312)
...+++|.+|+.||-...-... + .+..++|+|||-.|
T Consensus 53 ~~~~~~dgiiitGs~~~v~~~~pwi~~l~~~i~~~~~~~~PilGIC~G 100 (240)
T PRK05665 53 ADDEKFDAYLVTGSKADSFGTDPWIQTLKTYLLKLYERGDKLLGVCFG 100 (240)
T ss_pred CCcccCCEEEECCCCCCccccchHHHHHHHHHHHHHhcCCCEEEEeHH
Confidence 3467799999999955442211 1 12347999999988
No 113
>CHL00188 hisH imidazole glycerol phosphate synthase subunit hisH; Provisional
Probab=34.61 E-value=16 Score=32.84 Aligned_cols=52 Identities=13% Similarity=0.163 Sum_probs=29.5
Q ss_pred HhhhcCCcceeecccccCCCccccccEEEEEcCCcceEe------------ecc-cCCCCcceeeccCC
Q 021432 52 DILSKKPIEWEPVFRNNLSRPIRNVDLVVTVGGDGTLLQ------------AGH-LIDDSIPVLGVNSD 107 (312)
Q Consensus 52 ~~l~~~~~~~~~~~~~~l~~~~~~~Dlvi~lGGDGT~L~------------a~~-~~~~~~PilGIN~G 107 (312)
+.|+..|.+...+.. ...+.++|.+| ++|-|.+-. ..+ .+..++|+|||-.|
T Consensus 19 ~al~~~g~~v~vv~~---~~~l~~~d~iI-lPG~g~~~~~~~~l~~~gl~~~i~~~~~~~~pvlGIClG 83 (210)
T CHL00188 19 RAIQQAGQQPCIINS---ESELAQVHALV-LPGVGSFDLAMKKLEKKGLITPIKKWIAEGNPFIGICLG 83 (210)
T ss_pred HHHHHcCCcEEEEcC---HHHhhhCCEEE-ECCCCchHHHHHHHHHCCHHHHHHHHHHcCCCEEEECHH
Confidence 334445555444422 12346789877 688776421 111 22357999999887
No 114
>COG1282 PntB NAD/NADP transhydrogenase beta subunit [Energy production and conversion]
Probab=34.34 E-value=18 Score=35.51 Aligned_cols=30 Identities=13% Similarity=0.287 Sum_probs=24.2
Q ss_pred ccccCCCccccccEEEEEcCCcceEeeccc
Q 021432 65 FRNNLSRPIRNVDLVVTVGGDGTLLQAGHL 94 (312)
Q Consensus 65 ~~~~l~~~~~~~Dlvi~lGGDGT~L~a~~~ 94 (312)
+-+++..++.++|.+++||-.-|.-=|++.
T Consensus 373 emddIN~dF~~tDVvlVIGANDvvNPAA~~ 402 (463)
T COG1282 373 EMDEINDDFADTDVVLVIGANDVVNPAAQD 402 (463)
T ss_pred hHHhhcchhccccEEEEEccCCCCChhhcc
Confidence 345666688999999999999888877763
No 115
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=33.96 E-value=28 Score=29.24 Aligned_cols=60 Identities=17% Similarity=0.174 Sum_probs=32.9
Q ss_pred HHHHHhhhcCCcceeecccccC-----CCccccccEEEEEcCCcceEeec-c----------cCCCCcceeeccCC
Q 021432 48 NFCQDILSKKPIEWEPVFRNNL-----SRPIRNVDLVVTVGGDGTLLQAG-H----------LIDDSIPVLGVNSD 107 (312)
Q Consensus 48 ~~~~~~l~~~~~~~~~~~~~~l-----~~~~~~~Dlvi~lGGDGT~L~a~-~----------~~~~~~PilGIN~G 107 (312)
+..++.|++.|+++..+..... .+.+.++|+|++-|||=..+... + .+..+.|+.|...|
T Consensus 3 ~~~~~~f~~~g~~v~~l~~~~~~~~~~~~~i~~ad~I~~~GG~~~~l~~~l~~t~l~~~i~~~~~~G~vi~G~SAG 78 (154)
T PF03575_consen 3 EKFRKAFRKLGFEVDQLDLSDRNDADILEAIREADAIFLGGGDTFRLLRQLKETGLDEAIREAYRKGGVIIGTSAG 78 (154)
T ss_dssp HHHHHHHHHCT-EEEECCCTSCGHHHHHHHHHHSSEEEE--S-HHHHHHHHHHTTHHHHHHHHHHTTSEEEEETHH
T ss_pred HHHHHHHHHCCCEEEEEeccCCChHHHHHHHHhCCEEEECCCCHHHHHHHHHhCCHHHHHHHHHHCCCEEEEEChH
Confidence 4456677788877665543331 22567999999999995433221 1 11234677777665
No 116
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=32.51 E-value=27 Score=33.59 Aligned_cols=70 Identities=20% Similarity=0.138 Sum_probs=42.5
Q ss_pred ccccccEEEEEcCCcceEeecccCCCCcceeeccCCCCchhHHhhhhhccccccccccchH---HhhhcHHHHHHHHhcC
Q 021432 72 PIRNVDLVVTVGGDGTLLQAGHLIDDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCA---ATVNNFEQLLDNILEG 148 (312)
Q Consensus 72 ~~~~~Dlvi~lGGDGT~L~a~~~~~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~---~~~~~~~~~l~~l~~g 148 (312)
.+..+|++|+-||=||+..+.. .++|.+.+-...........+ .+ ...|.... ++++++.++++++++.
T Consensus 301 ll~~~d~~I~hgG~~t~~eal~---~GvP~v~~P~~~dQ~~~a~~~----~~-~G~g~~l~~~~~~~~~l~~al~~~l~~ 372 (401)
T cd03784 301 LLPRCAAVVHHGGAGTTAAALR---AGVPQLVVPFFGDQPFWAARV----AE-LGAGPALDPRELTAERLAAALRRLLDP 372 (401)
T ss_pred HhhhhheeeecCCchhHHHHHH---cCCCEEeeCCCCCcHHHHHHH----HH-CCCCCCCCcccCCHHHHHHHHHHHhCH
Confidence 4668999999999999988855 368888886542211111111 11 12343322 2467777788887764
Q ss_pred c
Q 021432 149 K 149 (312)
Q Consensus 149 ~ 149 (312)
.
T Consensus 373 ~ 373 (401)
T cd03784 373 P 373 (401)
T ss_pred H
Confidence 4
No 117
>PRK01175 phosphoribosylformylglycinamidine synthase I; Provisional
Probab=32.09 E-value=37 Score=31.64 Aligned_cols=36 Identities=28% Similarity=0.591 Sum_probs=24.3
Q ss_pred ccccccEEEEEcCC--cceEee---------------cc-cCCCCcceeeccCC
Q 021432 72 PIRNVDLVVTVGGD--GTLLQA---------------GH-LIDDSIPVLGVNSD 107 (312)
Q Consensus 72 ~~~~~Dlvi~lGGD--GT~L~a---------------~~-~~~~~~PilGIN~G 107 (312)
.++++|.+|..||- |.-+++ .+ +++.++|++||-.|
T Consensus 45 ~l~~~DgLvipGGfs~gD~l~~g~~~~~~l~~~l~~~Ik~f~~~gkpVLGICnG 98 (261)
T PRK01175 45 SVSDYDCLVIPGGFSAGDYIRAGAIFAARLKAVLRKDIEEFIDEGYPIIGICNG 98 (261)
T ss_pred chhhCCEEEECCCCCcccccccchhhHHHHHHHHHHHHHHHHHCCCeEEEECHH
Confidence 36789999999992 222321 11 23467999999887
No 118
>PRK03094 hypothetical protein; Provisional
Probab=31.46 E-value=1.2e+02 Score=23.23 Aligned_cols=52 Identities=17% Similarity=0.155 Sum_probs=32.6
Q ss_pred HHHHhhhcCCcceeecccccCCCccccccEEEEEcCCcceEeecccCCCCcceeec
Q 021432 49 FCQDILSKKPIEWEPVFRNNLSRPIRNVDLVVTVGGDGTLLQAGHLIDDSIPVLGV 104 (312)
Q Consensus 49 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~Dlvi~lGGDGT~L~a~~~~~~~~PilGI 104 (312)
.+++.|++.|.++..+.. .+..+.+|++|+=|-|.-++...... .+.||+--
T Consensus 12 ~i~~~L~~~GYeVv~l~~---~~~~~~~Da~VitG~d~n~mgi~d~~-t~~pVI~A 63 (80)
T PRK03094 12 DVQQALKQKGYEVVQLRS---EQDAQGCDCCVVTGQDSNVMGIADTS-TKGSVITA 63 (80)
T ss_pred HHHHHHHHCCCEEEecCc---ccccCCcCEEEEeCCCcceecccccc-cCCcEEEc
Confidence 345556666665443321 11246799999999999999875433 24777643
No 119
>PTZ00287 6-phosphofructokinase; Provisional
Probab=31.08 E-value=14 Score=42.04 Aligned_cols=30 Identities=30% Similarity=0.684 Sum_probs=23.6
Q ss_pred cccEEEEEcCCcceEeecccCC----CCcc--eeec
Q 021432 75 NVDLVVTVGGDGTLLQAGHLID----DSIP--VLGV 104 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~~~~~----~~~P--ilGI 104 (312)
+.|.+|+||||||+-.|.++.+ .++| |+||
T Consensus 271 ~Id~LViIGGddS~~~A~~Lae~~~~~gi~i~VIGI 306 (1419)
T PTZ00287 271 KLNGLVIIGGDGSNSNAALISEYFAERQIPISIIGI 306 (1419)
T ss_pred CCCEEEEECChhHHHHHHHHHHHHHhcCCCeeEEEE
Confidence 6799999999999988876432 4567 5888
No 120
>cd01748 GATase1_IGP_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in imidazole glycerol phosphate synthase (IGPS). Type 1 glutamine amidotransferase (GATase1) domain found in imidazole glycerol phosphate synthase (IGPS). IGPS incorporates ammonia derived from glutamine into N1-[(5'-phosphoribulosyl)-formimino]-5-aminoimidazole-4-carboxamide ribonucleotide (PRFAR) to form 5'-(5-aminoimidazole-4-carboxamide) ribonucleotide (AICAR) and imidazole glycerol phosphate (IGP). The glutamine amidotransferase domain generates the ammonia nucleophile which is channeled from the glutaminase active site to the PRFAR active site. IGPS belong to the triad family of amidotransferases having a conserved Cys-His-Glu catalytic triad in the glutaminase active site.
Probab=29.83 E-value=19 Score=31.49 Aligned_cols=54 Identities=20% Similarity=0.230 Sum_probs=30.5
Q ss_pred HHHhhhcCCcceeecccccCCCccccccEEEEEcCCcce------------Eeecc-cCCCCcceeeccCC
Q 021432 50 CQDILSKKPIEWEPVFRNNLSRPIRNVDLVVTVGGDGTL------------LQAGH-LIDDSIPVLGVNSD 107 (312)
Q Consensus 50 ~~~~l~~~~~~~~~~~~~~l~~~~~~~Dlvi~lGGDGT~------------L~a~~-~~~~~~PilGIN~G 107 (312)
+.+.|++.|.++..+... .++.++|.||.-|| |+. ....+ ....++|++||-.|
T Consensus 14 ~~~~l~~~g~~v~v~~~~---~~l~~~d~iiipG~-~~~~~~~~~~~~~~~~~~i~~~~~~~~pilGiC~G 80 (198)
T cd01748 14 VANALERLGAEVIITSDP---EEILSADKLILPGV-GAFGDAMANLRERGLIEALKEAIASGKPFLGICLG 80 (198)
T ss_pred HHHHHHHCCCeEEEEcCh---HHhccCCEEEECCC-CcHHHHHHHHHHcChHHHHHHHHHCCCcEEEECHH
Confidence 445556667666554321 13567898888554 321 11112 12357999999877
No 121
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=29.82 E-value=42 Score=33.15 Aligned_cols=71 Identities=15% Similarity=0.226 Sum_probs=43.9
Q ss_pred ccccccEEEEEcCCcceEeecccCCCCcceeeccCCCCchhHHhhhhhccccccccccchH---HhhhcHHHHHHHHhcC
Q 021432 72 PIRNVDLVVTVGGDGTLLQAGHLIDDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCA---ATVNNFEQLLDNILEG 148 (312)
Q Consensus 72 ~~~~~Dlvi~lGGDGT~L~a~~~~~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~---~~~~~~~~~l~~l~~g 148 (312)
.+..+|++|+-||=||+..+.+. ++|++.+-.+...... ..-.+ ....|.... .+...+.+++.++++.
T Consensus 297 ~l~~ad~vI~hGG~gtt~eaL~~---gvP~vv~P~~~DQ~~n-A~rve----~~G~G~~l~~~~l~~~~l~~av~~vL~~ 368 (406)
T COG1819 297 LLPRADAVIHHGGAGTTSEALYA---GVPLVVIPDGADQPLN-AERVE----ELGAGIALPFEELTEERLRAAVNEVLAD 368 (406)
T ss_pred HhhhcCEEEecCCcchHHHHHHc---CCCEEEecCCcchhHH-HHHHH----HcCCceecCcccCCHHHHHHHHHHHhcC
Confidence 56789999999999999888653 5888777555211001 00000 124564444 3466777777777776
Q ss_pred cc
Q 021432 149 KT 150 (312)
Q Consensus 149 ~~ 150 (312)
+.
T Consensus 369 ~~ 370 (406)
T COG1819 369 DS 370 (406)
T ss_pred HH
Confidence 54
No 122
>cd08171 GlyDH-like2 Glycerol dehydrogenase-like. Glycerol dehydrogenases-like. The proteins in this family have not been characterized, but they show sequence homology with glycerol dehydrogenase. Glycerol dehydrogenases (GlyDH) is a key enzyme in the glycerol dissimilation pathway. In anaerobic conditions, many microorganisms utilize glycerol as a source of carbon through coupled oxidative and reductive pathways. One of the pathways involves the oxidation of glycerol to dihydroxyacetone with the reduction of NAD+ to NADH catalyzed by glycerol dehydrogenases. Dihydroxyacetone is then phosphorylated by dihydroxyacetone kinase and enters the glycolytic pathway for further degradation. The activity of GlyDH is zinc-dependent. The zinc ion plays a role in stabilizing an alkoxide intermediate at the active site.
Probab=29.81 E-value=37 Score=32.61 Aligned_cols=32 Identities=22% Similarity=0.508 Sum_probs=25.7
Q ss_pred ccccEEEEEcCCcceEeecccCC--CCcceeeccC
Q 021432 74 RNVDLVVTVGGDGTLLQAGHLID--DSIPVLGVNS 106 (312)
Q Consensus 74 ~~~Dlvi~lGGDGT~L~a~~~~~--~~~PilGIN~ 106 (312)
.++|+||.+|| |+.+-+++.+. ..+|++.|.+
T Consensus 77 ~~~d~iiavGG-Gs~~D~aK~ia~~~~~p~i~VPT 110 (345)
T cd08171 77 QEADMIFAVGG-GKAIDTVKVLADKLGKPVFTFPT 110 (345)
T ss_pred cCCCEEEEeCC-cHHHHHHHHHHHHcCCCEEEecC
Confidence 47899999999 88888887642 3689988875
No 123
>PF12360 Pax7: Paired box protein 7 ; InterPro: IPR022106 This domain family is found in eukaryotes, and is approximately 40 amino acids in length. The family is found in association with PF00046 from PFAM, PF00292 from PFAM. Pax7 belongs to a family of genes that encode paired-box-containing transcription factors involved in the control of developmental processes. Pax7 has a distinct role in the specification of myogenic satellite cells.
Probab=29.75 E-value=17 Score=24.55 Aligned_cols=15 Identities=53% Similarity=0.488 Sum_probs=12.2
Q ss_pred eecccchHHHHhcCC
Q 021432 213 STAAGSSAAMLSAGG 227 (312)
Q Consensus 213 sTptGSTAY~lSAGG 227 (312)
|.+-|++||.||.+-
T Consensus 1 s~~d~~saY~Lss~R 15 (45)
T PF12360_consen 1 SAADGSSAYCLSSNR 15 (45)
T ss_pred CCccccccccccccc
Confidence 357799999999965
No 124
>PF14250 AbrB-like: AbrB-like transcriptional regulator
Probab=29.53 E-value=37 Score=25.27 Aligned_cols=33 Identities=18% Similarity=0.291 Sum_probs=23.2
Q ss_pred cceEEEcC-cceEEEeecCCeEEEccCCCeeeee
Q 021432 273 EGFVYIDG-SHVFVSIQNGDVIEISSKAPALKVF 305 (312)
Q Consensus 273 ~~~l~iDG-~~~~~~l~~gd~v~I~~s~~~~~l~ 305 (312)
++.+.|-- +...+.|+|||+++|+...+.++|+
T Consensus 38 NGnLLIG~AYT~~m~L~PGdEFeI~LgrKhI~L~ 71 (71)
T PF14250_consen 38 NGNLLIGSAYTKQMGLKPGDEFEIKLGRKHIHLI 71 (71)
T ss_pred CCCEEEcHHHHHHhCCCCCCEEEEEeCcceEEeC
Confidence 45454432 2236789999999999988887763
No 125
>TIGR01737 FGAM_synth_I phosphoribosylformylglycinamidine synthase I. In some species, phosphoribosylformylglycinamidine synthase is composed of a single polypeptide chain. This model describes the PurQ protein of Bacillus subtilis (where PurL, PurQ, and PurS are required for phosphoribosylformylglycinamidine synthase activity) and functionally equivalent proteins from other bacteria and archaea.
Probab=29.46 E-value=29 Score=31.37 Aligned_cols=35 Identities=31% Similarity=0.507 Sum_probs=22.8
Q ss_pred cccccEEEEEcCCc--ceEee------------cc-cCCCCcceeeccCC
Q 021432 73 IRNVDLVVTVGGDG--TLLQA------------GH-LIDDSIPVLGVNSD 107 (312)
Q Consensus 73 ~~~~Dlvi~lGGDG--T~L~a------------~~-~~~~~~PilGIN~G 107 (312)
++++|.+|+-||-. .-+++ .+ ....++|++||-.|
T Consensus 38 l~~~d~lilpGG~~~~d~~~~~~~~~~~~~~~~l~~~~~~g~pvlgIC~G 87 (227)
T TIGR01737 38 LPDYDGVVLPGGFSYGDYLRAGAIAAASPIMQEVREFAEKGVPVLGICNG 87 (227)
T ss_pred CCCCCEEEECCCCcccccccccchhcchHHHHHHHHHHHcCCEEEEECHH
Confidence 56799999999842 11111 11 12357899999887
No 126
>PF10127 Nuc-transf: Predicted nucleotidyltransferase; InterPro: IPR018775 Proteins in this entry are predicted to catalyse the transfer of nucleotide residues from nucleoside diphosphates or triphosphates into dimer or polymer forms.
Probab=29.28 E-value=26 Score=32.00 Aligned_cols=33 Identities=15% Similarity=0.137 Sum_probs=23.1
Q ss_pred cCCeeeeecccchHHHHhcCCeeecccccchhhhhhcc
Q 021432 207 SSGLRVSTAAGSSAAMLSAGGFIMPILSHDLQYMVREP 244 (312)
Q Consensus 207 gDGviVsTptGSTAY~lSAGG~v~Pi~~p~l~~~v~tP 244 (312)
+--++.++-+||.||+++.-. .+-++.++-+.|
T Consensus 17 ~~~il~~~~sGS~a~G~~s~d-----SD~D~r~vy~~~ 49 (247)
T PF10127_consen 17 NVKILYACESGSRAYGFASPD-----SDYDVRGVYIPP 49 (247)
T ss_pred CCcEEEEecccccccCCCCCC-----cCcccchhccCC
Confidence 446899999999999998765 244444444443
No 127
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=27.56 E-value=41 Score=32.37 Aligned_cols=69 Identities=14% Similarity=0.265 Sum_probs=40.8
Q ss_pred ccccccEEEEEcCCcceEeecccCCCCcceeeccCCCCchhHHhhhhhccccccccccch---HHhhhcHHHHHHHHhcC
Q 021432 72 PIRNVDLVVTVGGDGTLLQAGHLIDDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLC---AATVNNFEQLLDNILEG 148 (312)
Q Consensus 72 ~~~~~Dlvi~lGGDGT~L~a~~~~~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~---~~~~~~~~~~l~~l~~g 148 (312)
.+..+|++|+-||-||++.+.. .++|.+.+-........ .+.+.. ...|... +++++++.+.+.++++.
T Consensus 288 ll~~~~~~I~hgG~~t~~Eal~---~G~P~v~~p~~~dq~~~----a~~l~~-~g~g~~l~~~~~~~~~l~~ai~~~l~~ 359 (392)
T TIGR01426 288 ILKKADAFITHGGMNSTMEALF---NGVPMVAVPQGADQPMT----ARRIAE-LGLGRHLPPEEVTAEKLREAVLAVLSD 359 (392)
T ss_pred HHhhCCEEEECCCchHHHHHHH---hCCCEEecCCcccHHHH----HHHHHH-CCCEEEeccccCCHHHHHHHHHHHhcC
Confidence 3567899999999999988765 36899988665321111 111110 1223221 23456677777777654
No 128
>TIGR01855 IMP_synth_hisH imidazole glycerol phosphate synthase, glutamine amidotransferase subunit. This model represents the glutamine amidotransferase subunit (or domain, in eukaryotic systems) of imidazole glycerol phosphate synthase. This subunit catalyzes step 5 of histidine biosynthesis from PRPP. The other subunit, the cyclase, catalyzes step 6.
Probab=27.47 E-value=25 Score=30.88 Aligned_cols=55 Identities=18% Similarity=0.147 Sum_probs=30.3
Q ss_pred HHHhhhcCCcceeecccccCCCccccccEEEEEcCCc--ce--------Eeec-c-cCCCCcceeeccCC
Q 021432 50 CQDILSKKPIEWEPVFRNNLSRPIRNVDLVVTVGGDG--TL--------LQAG-H-LIDDSIPVLGVNSD 107 (312)
Q Consensus 50 ~~~~l~~~~~~~~~~~~~~l~~~~~~~Dlvi~lGGDG--T~--------L~a~-~-~~~~~~PilGIN~G 107 (312)
+.+.|+..|.+++.+..+ ..++++|.+|.-||.- +. +... + .+..++|+|||-.|
T Consensus 14 l~~~l~~~g~~v~v~~~~---~~l~~~d~lii~G~~~~~~~~~~l~~~~~~~l~~~~~~~~~pvlGiC~G 80 (196)
T TIGR01855 14 VKRALKRVGAEPVVVKDS---KEAELADKLILPGVGAFGAAMARLRENGLDLFVELVVRLGKPVLGICLG 80 (196)
T ss_pred HHHHHHHCCCcEEEEcCH---HHhccCCEEEECCCCCHHHHHHHHHHcCcHHHHHHHHhCCCCEEEECHH
Confidence 444555666665554321 1346789887755321 11 1122 2 33457899999877
No 129
>PRK13525 glutamine amidotransferase subunit PdxT; Provisional
Probab=26.78 E-value=24 Score=30.89 Aligned_cols=36 Identities=22% Similarity=0.477 Sum_probs=25.7
Q ss_pred ccccccEEEEEcCCcceEee----------cc-cCCCCcceeeccCC
Q 021432 72 PIRNVDLVVTVGGDGTLLQA----------GH-LIDDSIPVLGVNSD 107 (312)
Q Consensus 72 ~~~~~Dlvi~lGGDGT~L~a----------~~-~~~~~~PilGIN~G 107 (312)
.++++|.+|.-||-++.... .+ ....++|++||-.|
T Consensus 35 ~l~~~dgiii~GG~~~~~~~~~~~~~~~~~i~~~~~~g~PilGIC~G 81 (189)
T PRK13525 35 DLDEIDGLILPGGESTTMGKLLRDFGLLEPLREFIASGLPVFGTCAG 81 (189)
T ss_pred HhccCCEEEECCCChHHHHHHHHhccHHHHHHHHHHCCCeEEEECHH
Confidence 45679999999998765311 11 23457999999887
No 130
>cd01750 GATase1_CobQ Type 1 glutamine amidotransferase (GATase1) domain found in Cobyric Acid Synthase (CobQ). Type 1 glutamine amidotransferase (GATase1) domain found in Cobyric Acid Synthase (CobQ). CobQ plays a role in cobalamin biosythesis. CobQ catalyses amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide in the biosynthesis of cobalamin. CobQ belongs to the triad family of amidotransferases. Two of the three residues of the catalytic triad that are involved in glutamine binding, hydrolysis and transfer of the resulting ammonia to the acceptor substrate in other triad aminodotransferases are conserved in CobQ.
Probab=26.55 E-value=35 Score=29.94 Aligned_cols=55 Identities=16% Similarity=0.219 Sum_probs=31.1
Q ss_pred HHHHhhhcCCcceeecccccCCCccccccEEEEEcCCcceE------------eecc-cCCCCcceeeccCC
Q 021432 49 FCQDILSKKPIEWEPVFRNNLSRPIRNVDLVVTVGGDGTLL------------QAGH-LIDDSIPVLGVNSD 107 (312)
Q Consensus 49 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~Dlvi~lGGDGT~L------------~a~~-~~~~~~PilGIN~G 107 (312)
.+...++..|.++..+.... .+.++|.|| |||-+..- ...+ .+..++|++||-.|
T Consensus 14 ~l~~~~~~~G~~~~~~~~~~---~~~~~d~li-lpGg~~~~~~~~~~~~~~~~~~i~~~~~~g~pvlgiC~G 81 (194)
T cd01750 14 DLDPLAREPGVDVRYVEVPE---GLGDADLII-LPGSKDTIQDLAWLRKRGLAEAIKNYARAGGPVLGICGG 81 (194)
T ss_pred HHHHHHhcCCceEEEEeCCC---CCCCCCEEE-ECCCcchHHHHHHHHHcCHHHHHHHHHHCCCcEEEECHH
Confidence 34555667777766553221 256789766 55544221 1111 12357899999887
No 131
>TIGR01368 CPSaseIIsmall carbamoyl-phosphate synthase, small subunit. This model represents the whole of the small chain of the glutamine-dependent form (EC 6.3.5.5) of carbamoyl phosphate synthase, CPSase II. The C-terminal domain has glutamine amidotransferase activity. Note that the sequence from the mammalian urea cycle form has lost the active site Cys, resulting in an ammonia-dependent form, CPSase I (EC 6.3.4.16). CPSases of pyrimidine biosynthesis, arginine biosynthesis, and the urea cycle may be encoded by one or by several genes, depending on the species.
Probab=26.15 E-value=28 Score=34.04 Aligned_cols=58 Identities=22% Similarity=0.219 Sum_probs=35.0
Q ss_pred HHHHhhhcCCcceeecccccCCCcc--ccccEEEEEcCCcceEe------ecc-cCCCCcceeeccCC
Q 021432 49 FCQDILSKKPIEWEPVFRNNLSRPI--RNVDLVVTVGGDGTLLQ------AGH-LIDDSIPVLGVNSD 107 (312)
Q Consensus 49 ~~~~~l~~~~~~~~~~~~~~l~~~~--~~~Dlvi~lGGDGT~L~------a~~-~~~~~~PilGIN~G 107 (312)
.+.+.|.+.|..+..+..+.....+ ..+|.+|.-||-|..-. ..+ .++ ++|+|||-.|
T Consensus 186 ni~~~L~~~G~~v~vvp~~~~~~~i~~~~pDGIiLSgGPgdp~~~~~~i~~i~~~~~-~~PILGIClG 252 (358)
T TIGR01368 186 NILRRLVKRGCEVTVVPYDTDAEEIKKYNPDGIFLSNGPGDPAAVEPAIETIRKLLE-KIPIFGICLG 252 (358)
T ss_pred HHHHHHHHCCCEEEEEcCCCCHHHHHhhCCCEEEECCCCCCHHHHHHHHHHHHHHHc-CCCEEEECHH
Confidence 4555667778776655322111111 23599999999776422 222 234 7999999988
No 132
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=25.94 E-value=23 Score=32.45 Aligned_cols=61 Identities=18% Similarity=0.231 Sum_probs=41.3
Q ss_pred HHHHHHhhhcCCcceeeccccc-CCCccccccEEEEEcCCcceEeec-c----------cCCCCcceeeccCC
Q 021432 47 INFCQDILSKKPIEWEPVFRNN-LSRPIRNVDLVVTVGGDGTLLQAG-H----------LIDDSIPVLGVNSD 107 (312)
Q Consensus 47 ~~~~~~~l~~~~~~~~~~~~~~-l~~~~~~~Dlvi~lGGDGT~L~a~-~----------~~~~~~PilGIN~G 107 (312)
.+..++.+++.|+++..+...+ ..+.+.++|+|++=||+=+.|... + .+..++|++|...|
T Consensus 50 ~~~~~~af~~lG~~v~~l~~~~d~~~~l~~ad~I~v~GGnt~~l~~~l~~~gl~~~l~~~~~~G~~~~G~SAG 122 (233)
T PRK05282 50 TAKVAEALAPLGIEVTGIHRVADPVAAIENAEAIFVGGGNTFQLLKQLYERGLLAPIREAVKNGTPYIGWSAG 122 (233)
T ss_pred HHHHHHHHHHCCCEEEEeccchhhHHHHhcCCEEEECCccHHHHHHHHHHCCcHHHHHHHHHCCCEEEEECHH
Confidence 3456677888898766554322 223478999999999987755431 1 12357899999988
No 133
>PRK12838 carbamoyl phosphate synthase small subunit; Reviewed
Probab=25.70 E-value=28 Score=33.97 Aligned_cols=59 Identities=24% Similarity=0.182 Sum_probs=35.6
Q ss_pred HHHHHhhhcCCcceeecccccCCCcc--ccccEEEEEcCCcceEee------ccc-CCCCcceeeccCC
Q 021432 48 NFCQDILSKKPIEWEPVFRNNLSRPI--RNVDLVVTVGGDGTLLQA------GHL-IDDSIPVLGVNSD 107 (312)
Q Consensus 48 ~~~~~~l~~~~~~~~~~~~~~l~~~~--~~~Dlvi~lGGDGT~L~a------~~~-~~~~~PilGIN~G 107 (312)
..+.+.|.+.|..+..+..+.-...+ .++|.+|.-||-|..-.. .+. +. .+|++||-.|
T Consensus 179 ~ni~~~L~~~G~~v~vvp~~~~~~~i~~~~~DGIiLsgGPgdp~~~~~~~~~i~~~~~-~~PvlGIClG 246 (354)
T PRK12838 179 KSILRSLSKRGCKVTVLPYDTSLEEIKNLNPDGIVLSNGPGDPKELQPYLPEIKKLIS-SYPILGICLG 246 (354)
T ss_pred HHHHHHHHHCCCeEEEEECCCCHHHHhhcCCCEEEEcCCCCChHHhHHHHHHHHHHhc-CCCEEEECHH
Confidence 34555666777766655322111111 368999999999874322 221 23 3999999988
No 134
>cd01741 GATase1_1 Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. This group contains a subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. GATase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. Glutamine amidotransferases (GATase) includes the triad family of amidotransferases which have a conserved Cys-His-Glu catalytic triad in the glutaminase active site. In this subgroup this triad is conserved. GATase activity can be found in a range of biosynthetic enzymes, including: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase , anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. Glutamine amidotransferase (GATase) domains can occur either as single polypeptides, as in glutamine
Probab=25.24 E-value=92 Score=26.71 Aligned_cols=36 Identities=22% Similarity=0.339 Sum_probs=25.8
Q ss_pred ccccccEEEEEcCCcce-Eeec----------c-cCCCCcceeeccCC
Q 021432 72 PIRNVDLVVTVGGDGTL-LQAG----------H-LIDDSIPVLGVNSD 107 (312)
Q Consensus 72 ~~~~~Dlvi~lGGDGT~-L~a~----------~-~~~~~~PilGIN~G 107 (312)
.+.+.|.+|.-||-++. .... + ....++|++||-.|
T Consensus 43 ~~~~~dgvil~Gg~~~~~~~~~~~~~~~~~~i~~~~~~~~pilgiC~G 90 (188)
T cd01741 43 DLDDYDGLVILGGPMSVDEDDYPWLKKLKELIRQALAAGKPVLGICLG 90 (188)
T ss_pred CcccCCEEEECCCCccCCccCChHHHHHHHHHHHHHHCCCCEEEECcc
Confidence 46789999999998876 2111 1 12356999999988
No 135
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=25.00 E-value=39 Score=30.16 Aligned_cols=51 Identities=27% Similarity=0.401 Sum_probs=35.1
Q ss_pred EEEEEcCCcceEeecc-----cCCCCcceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhc
Q 021432 78 LVVTVGGDGTLLQAGH-----LIDDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILE 147 (312)
Q Consensus 78 lvi~lGGDGT~L~a~~-----~~~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~ 147 (312)
++|.+-|||-.-..-+ +.+.++||+|||+= .=|...-+|++....++++.+
T Consensus 4 ~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl-------------------~Yfw~~rtP~~~a~Dl~~~i~ 59 (192)
T PF06057_consen 4 LAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSL-------------------RYFWSERTPEQTAADLARIIR 59 (192)
T ss_pred EEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechH-------------------HHHhhhCCHHHHHHHHHHHHH
Confidence 6888999999875433 22468999999973 224444567777777777654
No 136
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=24.93 E-value=67 Score=24.75 Aligned_cols=58 Identities=19% Similarity=0.208 Sum_probs=30.2
Q ss_pred HHHHhhhcCCcceeec------cccc--CCCccccccEEEEEcC---CcceEeecccC-CCCcceeeccC
Q 021432 49 FCQDILSKKPIEWEPV------FRNN--LSRPIRNVDLVVTVGG---DGTLLQAGHLI-DDSIPVLGVNS 106 (312)
Q Consensus 49 ~~~~~l~~~~~~~~~~------~~~~--l~~~~~~~Dlvi~lGG---DGT~L~a~~~~-~~~~PilGIN~ 106 (312)
..++.+++.|.+.... .... +.+.+.++|+||++=+ =++...+-+.+ ..++|++=.+.
T Consensus 14 ~~~~~~~~~G~~~~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~~~~~ 83 (97)
T PF10087_consen 14 RYKRILEKYGGKLIHHGRDGGDEKKASRLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYGIPIIYSRS 83 (97)
T ss_pred HHHHHHHHcCCEEEEEecCCCCccchhHHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcCCcEEEECC
Confidence 3445555666554433 1122 3446778999998632 11111111122 25799998883
No 137
>PRK13170 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional
Probab=24.73 E-value=28 Score=30.61 Aligned_cols=54 Identities=24% Similarity=0.158 Sum_probs=32.0
Q ss_pred HHHhhhcCCcceeecccccCCCccccccEEEEEcCCcceEeecc------c---C-CCCcceeeccCC
Q 021432 50 CQDILSKKPIEWEPVFRNNLSRPIRNVDLVVTVGGDGTLLQAGH------L---I-DDSIPVLGVNSD 107 (312)
Q Consensus 50 ~~~~l~~~~~~~~~~~~~~l~~~~~~~Dlvi~lGGDGT~L~a~~------~---~-~~~~PilGIN~G 107 (312)
+...|++.+.++..+... +.+.++|.+| +-|=|+...+.+ . + +.++|+|||-.|
T Consensus 16 ~~~~l~~~g~~~~~v~~~---~~~~~~d~iI-lPG~G~~~~~~~~l~~~~l~~~i~~~~~PilGIClG 79 (196)
T PRK13170 16 VKFAIERLGYEPVVSRDP---DVILAADKLF-LPGVGTAQAAMDQLRERELIDLIKACTQPVLGICLG 79 (196)
T ss_pred HHHHHHHCCCeEEEECCH---HHhCCCCEEE-ECCCCchHHHHHHHHHcChHHHHHHcCCCEEEECHH
Confidence 344555666666555322 2345688766 477666555421 1 1 236899999988
No 138
>PF08308 PEGA: PEGA domain; InterPro: IPR013229 This domain is found in both archaea and bacteria and has similarity to S-layer (surface layer) proteins. It is named after the characteristic PEGA sequence motif found in this domain. The secondary structure of this domain is predicted to be beta-strands.
Probab=23.73 E-value=1.5e+02 Score=21.15 Aligned_cols=17 Identities=24% Similarity=0.292 Sum_probs=11.4
Q ss_pred eeEEEeeecceEEEcCc
Q 021432 265 MEAMWFCKEGFVYIDGS 281 (312)
Q Consensus 265 i~i~~~~~~~~l~iDG~ 281 (312)
+.|.+....+.+++||+
T Consensus 4 l~V~s~p~gA~V~vdg~ 20 (71)
T PF08308_consen 4 LRVTSNPSGAEVYVDGK 20 (71)
T ss_pred EEEEEECCCCEEEECCE
Confidence 55655556677788875
No 139
>PRK14494 putative molybdopterin-guanine dinucleotide biosynthesis protein MobB/FeS domain-containing protein protein; Provisional
Probab=23.54 E-value=1.2e+02 Score=27.75 Aligned_cols=36 Identities=19% Similarity=0.340 Sum_probs=23.9
Q ss_pred HHHHHHHHhcCccccCc----cceEEEEecCcccCcccccchh
Q 021432 138 FEQLLDNILEGKTVPSN----LSRILIRVNSKSLPTFALNDIL 176 (312)
Q Consensus 138 ~~~~l~~l~~g~~~~~~----~~rl~~~~~g~~~~~~ALNDv~ 176 (312)
..+..+++.+|+..... ..++.+.+||+.+ -||+.+
T Consensus 160 C~~~a~~i~~g~~~~~~C~~~~~~~~~~v~g~~i---~ln~fv 199 (229)
T PRK14494 160 CKGFAKAIVKGEAKWDDCVSLSGRVKLIVDGKII---PLNPFV 199 (229)
T ss_pred HHHHHHHHHcCCCCccCCccCCceeEEEECCeee---cCCHHH
Confidence 44556677788776532 2357788899875 477765
No 140
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.00 E-value=67 Score=30.77 Aligned_cols=30 Identities=23% Similarity=0.351 Sum_probs=24.0
Q ss_pred EEEcCCcceEeecccCC---CCcceeeccCCCC
Q 021432 80 VTVGGDGTLLQAGHLID---DSIPVLGVNSDPT 109 (312)
Q Consensus 80 i~lGGDGT~L~a~~~~~---~~~PilGIN~G~~ 109 (312)
+-+|+|||++-..++-. +-.|++|+..+++
T Consensus 231 ld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~ 263 (366)
T COG3490 231 LDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGE 263 (366)
T ss_pred eeeCCCCcEEEEEEeeCCCccCCcceeeccCCC
Confidence 56899999999998753 3367899998854
No 141
>PRK12564 carbamoyl phosphate synthase small subunit; Reviewed
Probab=22.91 E-value=37 Score=33.17 Aligned_cols=59 Identities=19% Similarity=0.163 Sum_probs=35.7
Q ss_pred HHHHhhhcCCcceeecccccCCCcc--ccccEEEEEcCCcceEee------ccc-CCCCcceeeccCC
Q 021432 49 FCQDILSKKPIEWEPVFRNNLSRPI--RNVDLVVTVGGDGTLLQA------GHL-IDDSIPVLGVNSD 107 (312)
Q Consensus 49 ~~~~~l~~~~~~~~~~~~~~l~~~~--~~~Dlvi~lGGDGT~L~a------~~~-~~~~~PilGIN~G 107 (312)
.+.+.|.+.|..+..+..+.....+ .++|.||.-||.|.--+. .+. .+.++|++||-.|
T Consensus 190 nivr~L~~~G~~v~vvp~~~~~~~i~~~~~DGIvLSgGPgdp~~~~~~~~~i~~~~~~~~PilGIClG 257 (360)
T PRK12564 190 NILRELAERGCRVTVVPATTTAEEILALNPDGVFLSNGPGDPAALDYAIEMIRELLEKKIPIFGICLG 257 (360)
T ss_pred HHHHHHHHCCCEEEEEeCCCCHHHHHhcCCCEEEEeCCCCChHHHHHHHHHHHHHHHcCCeEEEECHH
Confidence 3455666777766655432211111 268999999998864321 222 2346999999988
No 142
>CHL00197 carA carbamoyl-phosphate synthase arginine-specific small subunit; Provisional
Probab=21.96 E-value=43 Score=33.04 Aligned_cols=59 Identities=15% Similarity=0.094 Sum_probs=36.5
Q ss_pred HHHHhhhcCCcceeecccccCCCc--cccccEEEEEcCCcceEe------ecc-cCCCCcceeeccCC
Q 021432 49 FCQDILSKKPIEWEPVFRNNLSRP--IRNVDLVVTVGGDGTLLQ------AGH-LIDDSIPVLGVNSD 107 (312)
Q Consensus 49 ~~~~~l~~~~~~~~~~~~~~l~~~--~~~~Dlvi~lGGDGT~L~------a~~-~~~~~~PilGIN~G 107 (312)
.+.+.|.+.|.++.++..+.-.+. ..++|.||.-||-|.--. ..+ .+...+|++||-.|
T Consensus 205 ni~~~L~~~G~~v~vvp~~~~~~~i~~~~~dgIilSgGPg~p~~~~~~i~~i~~~~~~~~PilGIClG 272 (382)
T CHL00197 205 NILRRLKSFGCSITVVPATSPYQDILSYQPDGILLSNGPGDPSAIHYGIKTVKKLLKYNIPIFGICMG 272 (382)
T ss_pred HHHHHHHHCCCeEEEEcCCCCHHHHhccCCCEEEEcCCCCChhHHHHHHHHHHHHHhCCCCEEEEcHH
Confidence 456677788887766633221111 126899999999885321 112 23346999999988
No 143
>PRK13141 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional
Probab=21.94 E-value=33 Score=30.24 Aligned_cols=55 Identities=18% Similarity=0.137 Sum_probs=30.4
Q ss_pred HHHhhhcCCcceeecccccCCCccccccEEEEEcCC---cc--------eEeecc-cCCCCcceeeccCC
Q 021432 50 CQDILSKKPIEWEPVFRNNLSRPIRNVDLVVTVGGD---GT--------LLQAGH-LIDDSIPVLGVNSD 107 (312)
Q Consensus 50 ~~~~l~~~~~~~~~~~~~~l~~~~~~~Dlvi~lGGD---GT--------~L~a~~-~~~~~~PilGIN~G 107 (312)
+.+.|++.|+++..+... ..+.++|.+|+-||. .+ +....+ ....++|++||-.|
T Consensus 15 i~~~l~~~G~~v~~~~~~---~~l~~~d~iiipG~~~~~~~~~~~~~~~~~~~i~~~~~~~~pvlGIC~G 81 (205)
T PRK13141 15 VEKALERLGAEAVITSDP---EEILAADGVILPGVGAFPDAMANLRERGLDEVIKEAVASGKPLLGICLG 81 (205)
T ss_pred HHHHHHHCCCeEEEECCH---HHhccCCEEEECCCCchHHHHHHHHHcChHHHHHHHHHCCCcEEEECHH
Confidence 344555666665544211 234578998876642 12 122222 22357999999887
No 144
>PRK14607 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Provisional
Probab=21.94 E-value=55 Score=33.67 Aligned_cols=33 Identities=30% Similarity=0.468 Sum_probs=24.6
Q ss_pred cccEEEEEcCCcceEeec------ccCCCCcceeeccCC
Q 021432 75 NVDLVVTVGGDGTLLQAG------HLIDDSIPVLGVNSD 107 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~------~~~~~~~PilGIN~G 107 (312)
++|.||.-||.|..-... +.+..++|+|||-.|
T Consensus 44 ~~d~vIlsgGP~~p~~~~~~~~li~~~~~~~PvLGIClG 82 (534)
T PRK14607 44 NPSHIVISPGPGRPEEAGISVEVIRHFSGKVPILGVCLG 82 (534)
T ss_pred CCCEEEECCCCCChhhCCccHHHHHHhhcCCCEEEEcHH
Confidence 579999999999864431 112347899999988
No 145
>cd03132 GATase1_catalase Type 1 glutamine amidotransferase (GATase1)-like domain found in at the C-terminal of several large catalases. Type 1 glutamine amidotransferase (GATase1)-like domain found in at the C-terminal of several large catalases. Catalase catalyzes the dismutation of hydrogen peroxide (H2O2) to water and oxygen. This group includes the large catalases: Neurospora crassa Catalase-1 and Catalase-3 and, Escherichia coli HP-II. This GATase1-like domain has an essential role in HP-II catalase activity. However, it lacks enzymatic activity and the catalytic triad typical of GATase1 domains. Catalase-1 and -3 are homotetrameric, HP-II is homohexameric. It has been proposed that this domain may facilitate the folding and oligomerization process. The interface between this GATase1-like domain of HP-II and the core of the subunit forms part of a channel which provides access to the deeply buried catalase active sites of HPII. Catalase-1 is associated with non-growing cells; C
Probab=21.88 E-value=30 Score=28.26 Aligned_cols=34 Identities=21% Similarity=0.256 Sum_probs=23.6
Q ss_pred cccEEEEEcCCcceE--ee-------cc-cCCCCcceeeccCCC
Q 021432 75 NVDLVVTVGGDGTLL--QA-------GH-LIDDSIPVLGVNSDP 108 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L--~a-------~~-~~~~~~PilGIN~G~ 108 (312)
++|++++.||.+..- .. .+ ......||.+|-.|+
T Consensus 62 ~~D~liVpGg~~~~~~~~~~~~l~~~l~~~~~~~~~I~aic~G~ 105 (142)
T cd03132 62 LFDAVVVPGGAEAAFALAPSGRALHFVTEAFKHGKPIGAVGEGS 105 (142)
T ss_pred hcCEEEECCCccCHHHHccChHHHHHHHHHHhcCCeEEEcCchH
Confidence 689999999987632 11 11 123578999999884
No 146
>PRK03619 phosphoribosylformylglycinamidine synthase I; Provisional
Probab=21.34 E-value=82 Score=28.26 Aligned_cols=54 Identities=28% Similarity=0.346 Sum_probs=30.9
Q ss_pred Hhhh-cCCcceeecccccCCCccccccEEEEEcCCc--ceEee------------c-ccCCCCcceeeccCC
Q 021432 52 DILS-KKPIEWEPVFRNNLSRPIRNVDLVVTVGGDG--TLLQA------------G-HLIDDSIPVLGVNSD 107 (312)
Q Consensus 52 ~~l~-~~~~~~~~~~~~~l~~~~~~~Dlvi~lGGDG--T~L~a------------~-~~~~~~~PilGIN~G 107 (312)
..|+ ..|.+...+...+ ..++++|.+|.-||-+ ..|++ . +....++|++||-.|
T Consensus 19 ~a~~~~~G~~~~~v~~~~--~~l~~~D~lvipGG~~~~d~l~~~~~~~~~~~~~~l~~~~~~g~~ilgIC~G 88 (219)
T PRK03619 19 RALRDLLGAEPEYVWHKE--TDLDGVDAVVLPGGFSYGDYLRCGAIAAFSPIMKAVKEFAEKGKPVLGICNG 88 (219)
T ss_pred HHHHhcCCCeEEEEecCc--CCCCCCCEEEECCCCchhhhhccchhhhchHHHHHHHHHHHCCCEEEEECHH
Confidence 3444 4565544332221 2356799999999843 22221 1 123457999999888
No 147
>cd08170 GlyDH Glycerol dehydrogenases (GlyDH) catalyzes oxidation of glycerol to dihydroxyacetone in glycerol dissmilation. Glycerol dehydrogenases (GlyDH) is a key enzyme in the glycerol dissimilation pathway . In anaerobic conditions, many microorganisms utilize glycerol as a source of carbon through coupled oxidative and reductive pathways. One of the pathways involves the oxidation of glycerol to dihydroxyacetone with the reduction of NAD+ to NADH catalyzed by glycerol dehydrogenases. Dihydroxyacetone is then phosphorylated by dihydroxyacetone kinase and enters the glycolytic pathway for further degradation. The activity of GlyDH is zinc-dependent. The zinc ion plays a role in stabilizing an alkoxide intermediate at the active site.
Probab=20.63 E-value=40 Score=32.36 Aligned_cols=33 Identities=27% Similarity=0.473 Sum_probs=26.1
Q ss_pred ccccEEEEEcCCcceEeecccCC--CCcceeeccCC
Q 021432 74 RNVDLVVTVGGDGTLLQAGHLID--DSIPVLGVNSD 107 (312)
Q Consensus 74 ~~~Dlvi~lGGDGT~L~a~~~~~--~~~PilGIN~G 107 (312)
.++|+||.+|| |+.+-+++.+. ..+|++.|-+-
T Consensus 76 ~~~D~IIavGG-GS~iD~aK~ia~~~~~P~iaIPTT 110 (351)
T cd08170 76 NGADVVIGIGG-GKTLDTAKAVADYLGAPVVIVPTI 110 (351)
T ss_pred cCCCEEEEecC-chhhHHHHHHHHHcCCCEEEeCCc
Confidence 47899999999 88888887642 46899988753
No 148
>cd01745 GATase1_2 Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. This group contains a subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. GATase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. Glutamine amidotransferases (GATase) includes the triad family of amidotransferases which have a conserved Cys-His-Glu catalytic triad in the glutaminase active site. In this subgroup this triad is conserved. GATase activity can be found in a range of biosynthetic enzymes, including: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase , anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. Glutamine amidotransferase (GATase) domains can occur either as single polypeptides, as in glutamine
Probab=20.61 E-value=34 Score=29.83 Aligned_cols=58 Identities=16% Similarity=0.113 Sum_probs=32.2
Q ss_pred HHHhhhcCCcceeeccccc----CCCccccccEEEEEcCCcceE-----------------------eecc-cCCCCcce
Q 021432 50 CQDILSKKPIEWEPVFRNN----LSRPIRNVDLVVTVGGDGTLL-----------------------QAGH-LIDDSIPV 101 (312)
Q Consensus 50 ~~~~l~~~~~~~~~~~~~~----l~~~~~~~Dlvi~lGGDGT~L-----------------------~a~~-~~~~~~Pi 101 (312)
..+.|+..|.....+.... +...+.++|.+|.-||-+.-- ...+ .++.++|+
T Consensus 24 ~~~~l~~~G~~~~iv~~~~~~~~~~~~l~~~dglvl~GG~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~Pi 103 (189)
T cd01745 24 YVDAVRKAGGLPVLLPPVDDEEDLEQYLELLDGLLLTGGGDVDPPLYGEEPHPELGPIDPERDAFELALLRAALERGKPI 103 (189)
T ss_pred HHHHHHHCCCEEEEeCCCCChHHHHHHHhhCCEEEECCCCCCChhhcCCCCCcccCCCChhHHHHHHHHHHHHHHCCCCE
Confidence 3444555665444332221 112346789999999964310 1111 12457999
Q ss_pred eeccCC
Q 021432 102 LGVNSD 107 (312)
Q Consensus 102 lGIN~G 107 (312)
+||-.|
T Consensus 104 lgiC~G 109 (189)
T cd01745 104 LGICRG 109 (189)
T ss_pred EEEcch
Confidence 999988
No 149
>PTZ00408 NAD-dependent deacetylase; Provisional
Probab=20.61 E-value=77 Score=29.09 Aligned_cols=38 Identities=24% Similarity=0.343 Sum_probs=31.8
Q ss_pred ccccccEEEEEcCCcceEeecccC----CCCcceeeccCCCC
Q 021432 72 PIRNVDLVVTVGGDGTLLQAGHLI----DDSIPVLGVNSDPT 109 (312)
Q Consensus 72 ~~~~~Dlvi~lGGDGT~L~a~~~~----~~~~PilGIN~G~~ 109 (312)
.+.++|++|++|=.+++.-|+.+. ..+.|++=||.+|.
T Consensus 169 ~~~~~DlllviGTSl~V~pa~~l~~~a~~~g~~vi~IN~~~~ 210 (242)
T PTZ00408 169 VMSKTDLFVAVGTSGNVYPAAGFVGRAQFYGATTLELNLEEG 210 (242)
T ss_pred HHHhCCEEEEEccCCccccHHHHHHHHHHcCCeEEEECCCCC
Confidence 456899999999999999888653 25789999999975
Done!