Query 021432
Match_columns 312
No_of_seqs 175 out of 1351
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 04:04:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021432.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021432hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pfn_A NAD kinase; structural 100.0 4.9E-57 1.7E-61 432.5 7.7 268 3-308 38-345 (365)
2 1z0s_A Probable inorganic poly 100.0 2.1E-54 7E-59 401.2 7.0 201 72-312 65-266 (278)
3 3afo_A NADH kinase POS5; alpha 100.0 1.5E-53 5.2E-58 412.2 5.9 262 10-302 41-326 (388)
4 1u0t_A Inorganic polyphosphate 100.0 2.7E-50 9.2E-55 379.4 4.9 271 10-312 4-289 (307)
5 2i2c_A Probable inorganic poly 100.0 1.4E-47 4.9E-52 355.1 7.3 207 74-312 34-253 (272)
6 2an1_A Putative kinase; struct 100.0 1.3E-47 4.4E-52 357.8 4.3 267 10-312 5-277 (292)
7 1yt5_A Inorganic polyphosphate 100.0 2.2E-46 7.5E-51 344.7 7.9 203 74-312 40-243 (258)
8 2qv7_A Diacylglycerol kinase D 99.8 1E-19 3.5E-24 172.5 7.9 241 9-309 23-318 (337)
9 2bon_A Lipid kinase; DAG kinas 99.6 6.6E-16 2.2E-20 146.1 5.8 197 74-312 81-322 (332)
10 3s40_A Diacylglycerol kinase; 98.1 4.8E-07 1.7E-11 84.1 0.4 111 10-151 8-126 (304)
11 1pfk_A Phosphofructokinase; tr 87.8 0.061 2.1E-06 50.3 -1.5 85 75-173 94-180 (320)
12 1zxx_A 6-phosphofructokinase; 87.6 0.063 2.2E-06 50.1 -1.5 85 75-173 93-179 (319)
13 4a3s_A 6-phosphofructokinase; 86.4 0.11 3.8E-06 48.4 -0.6 85 75-173 93-179 (319)
14 2f48_A Diphosphate--fructose-6 77.7 0.22 7.4E-06 49.9 -2.3 60 75-145 166-234 (555)
15 3hno_A Pyrophosphate-dependent 76.9 0.28 9.5E-06 47.4 -1.8 51 75-134 104-161 (419)
16 2hig_A 6-phospho-1-fructokinas 76.0 0.25 8.6E-06 48.6 -2.4 62 75-147 189-257 (487)
17 3l7n_A Putative uncharacterize 74.2 0.78 2.7E-05 40.3 0.5 36 72-107 42-93 (236)
18 3o8l_A 6-phosphofructokinase, 72.1 1.5 5.3E-05 45.3 2.2 86 75-173 489-583 (762)
19 3o8l_A 6-phosphofructokinase, 71.4 1.6 5.6E-05 45.1 2.2 84 75-172 109-217 (762)
20 2a9v_A GMP synthase; structura 68.3 1.3 4.4E-05 38.3 0.5 35 73-107 52-94 (212)
21 3opy_A 6-phosphofructo-1-kinas 66.5 1.7 5.7E-05 46.1 1.1 85 75-173 304-413 (989)
22 3opy_B 6-phosphofructo-1-kinas 61.4 2.4 8.2E-05 44.9 1.1 85 75-173 276-385 (941)
23 3o8o_B 6-phosphofructokinase s 61.2 1.1 3.6E-05 46.6 -1.6 86 75-173 484-578 (766)
24 3opy_B 6-phosphofructo-1-kinas 60.6 1 3.5E-05 47.6 -1.8 86 75-173 662-756 (941)
25 1o1y_A Conserved hypothetical 60.1 2.4 8E-05 37.3 0.7 58 50-107 29-102 (239)
26 3opy_A 6-phosphofructo-1-kinas 59.9 0.95 3.2E-05 48.0 -2.2 86 75-173 688-782 (989)
27 3o8o_A 6-phosphofructokinase s 59.0 0.94 3.2E-05 47.1 -2.4 86 75-173 483-577 (787)
28 3m3p_A Glutamine amido transfe 58.5 3.6 0.00012 36.6 1.7 36 72-107 45-91 (250)
29 3o8o_A 6-phosphofructokinase s 53.6 1.9 6.6E-05 44.8 -1.2 18 75-92 99-116 (787)
30 2o6l_A UDP-glucuronosyltransfe 52.2 4.3 0.00015 32.7 1.0 67 74-148 85-154 (170)
31 1pno_A NAD(P) transhydrogenase 51.7 3.2 0.00011 35.0 0.1 68 27-94 41-117 (180)
32 1i1q_B Anthranilate synthase c 50.8 3.2 0.00011 34.8 -0.0 31 77-107 49-85 (192)
33 3o8o_B 6-phosphofructokinase s 50.3 2 6.9E-05 44.5 -1.6 18 75-92 98-115 (766)
34 2fsv_C NAD(P) transhydrogenase 49.9 3.6 0.00012 35.4 0.1 29 66-94 112-140 (203)
35 1wl8_A GMP synthase [glutamine 44.9 4 0.00014 34.0 -0.3 33 75-107 43-81 (189)
36 2bru_C NAD(P) transhydrogenase 41.3 3 0.0001 35.3 -1.7 68 27-94 48-124 (186)
37 1d4o_A NADP(H) transhydrogenas 41.1 3.8 0.00013 34.7 -1.1 78 27-104 40-130 (184)
38 1djl_A Transhydrogenase DIII; 40.4 4.1 0.00014 35.2 -1.0 38 67-104 112-153 (207)
39 3r75_A Anthranilate/para-amino 40.2 7.7 0.00026 39.4 0.8 59 48-107 460-530 (645)
40 2vpi_A GMP synthase; guanine m 37.1 13 0.00046 31.9 1.8 34 74-107 66-105 (218)
41 3tsa_A SPNG, NDP-rhamnosyltran 36.6 20 0.00068 32.5 3.0 69 72-148 283-356 (391)
42 1ka9_H Imidazole glycerol phos 35.6 10 0.00035 31.8 0.8 35 73-107 38-84 (200)
43 4fzr_A SSFS6; structural genom 35.1 14 0.00046 33.9 1.6 69 72-148 297-368 (398)
44 2p6p_A Glycosyl transferase; X 34.7 11 0.00036 34.4 0.7 69 72-148 276-347 (384)
45 3tqi_A GMP synthase [glutamine 32.2 28 0.00096 34.1 3.4 33 75-107 53-91 (527)
46 3otg_A CALG1; calicheamicin, T 30.8 14 0.00047 33.7 0.8 69 72-148 305-376 (412)
47 2iss_D Glutamine amidotransfer 30.2 12 0.00041 31.7 0.3 52 53-107 38-100 (208)
48 3d54_D Phosphoribosylformylgly 29.1 7.8 0.00027 32.6 -1.1 51 54-107 23-88 (213)
49 1qdl_B Protein (anthranilate s 28.9 8.9 0.0003 32.2 -0.8 33 75-107 45-86 (195)
50 2ywj_A Glutamine amidotransfer 28.8 17 0.00059 29.9 1.0 36 72-107 34-77 (186)
51 2ywd_A Glutamine amidotransfer 27.7 13 0.00044 30.7 0.0 53 52-107 19-83 (191)
52 4gud_A Imidazole glycerol phos 27.6 7.8 0.00027 32.7 -1.4 54 50-107 18-81 (211)
53 2ywb_A GMP synthase [glutamine 26.3 22 0.00075 34.6 1.4 33 75-107 42-80 (503)
54 3riy_A NAD-dependent deacetyla 25.9 35 0.0012 30.5 2.6 38 73-110 210-251 (273)
55 1q7r_A Predicted amidotransfer 25.1 16 0.00055 31.2 0.1 53 52-107 40-103 (219)
56 2nv0_A Glutamine amidotransfer 23.9 12 0.00042 31.1 -0.8 35 73-107 36-81 (196)
57 2yjn_A ERYCIII, glycosyltransf 23.6 16 0.00054 34.2 -0.2 69 72-148 332-403 (441)
58 2vxo_A GMP synthase [glutamine 23.4 31 0.0011 35.2 1.9 57 51-107 46-110 (697)
59 1a9x_B Carbamoyl phosphate syn 22.9 18 0.00061 34.2 0.0 58 50-107 204-270 (379)
60 1gpm_A GMP synthetase, XMP ami 22.9 20 0.00068 35.2 0.4 33 75-107 50-88 (525)
61 3uow_A GMP synthetase; structu 22.3 23 0.00078 35.1 0.7 33 75-107 50-92 (556)
62 1rrv_A Glycosyltransferase GTF 22.3 22 0.00074 32.8 0.5 67 73-148 300-369 (416)
63 3ixq_A Ribose-5-phosphate isom 21.8 41 0.0014 29.4 2.2 19 204-222 16-34 (226)
64 1gpw_B Amidotransferase HISH; 21.8 17 0.00058 30.3 -0.3 34 74-107 41-86 (201)
65 3ia7_A CALG4; glycosysltransfe 21.7 23 0.00079 31.9 0.5 69 73-149 295-367 (402)
66 1iir_A Glycosyltransferase GTF 21.0 26 0.00089 32.3 0.7 67 73-148 299-368 (415)
67 4gmk_A Ribose-5-phosphate isom 20.0 48 0.0016 29.1 2.2 20 204-223 17-36 (228)
No 1
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.9e-57 Score=432.47 Aligned_cols=268 Identities=22% Similarity=0.332 Sum_probs=210.3
Q ss_pred cccchhhcccccccccccCCCcccccchhHHHhhhhhhhhhhhhHHHHHHh---hhcCCcce---e-ecccccCCCcccc
Q 021432 3 RRKLLLLLKPFDVYTVRQSNGISHITNPLILQHLENRCKVHKDAINFCQDI---LSKKPIEW---E-PVFRNNLSRPIRN 75 (312)
Q Consensus 3 ~~~~~~~~k~~~i~~n~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---l~~~~~~~---~-~~~~~~l~~~~~~ 75 (312)
++++++|.|.- .........++..||.+++.... .++.+.+. .+...... . ...........++
T Consensus 38 ~k~I~iv~K~~--------~~~~~~~~~~l~~~L~~~~~~V~-ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (365)
T 3pfn_A 38 PKSVLVIKKMR--------DASLLQPFKELCTHLMEENMIVY-VEKKVLEDPAIASDESFGAVKKKFCTFREDYDDISNQ 108 (365)
T ss_dssp CCEEEEEECTT--------CGGGHHHHHHHHHHHHHTSCEEE-EEHHHHHSHHHHHCSTTHHHHHHCEEECTTTCCCTTT
T ss_pred CCEEEEEecCC--------CHHHHHHHHHHHHHHHHCCCEEE-EehHHhhhhccccccccccccccccccccChhhcccC
Confidence 45666665522 34455677899999999985321 11222221 11111100 0 0001122233468
Q ss_pred ccEEEEEcCCcceEeecccCC-CCcceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhcCccccCc
Q 021432 76 VDLVVTVGGDGTLLQAGHLID-DSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILEGKTVPSN 154 (312)
Q Consensus 76 ~Dlvi~lGGDGT~L~a~~~~~-~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~g~~~~~~ 154 (312)
+|+||+||||||||+|++.+. ..+||+|||+| ++|||+++++++++++++++++|+|.+++
T Consensus 109 ~DlvI~lGGDGT~L~aa~~~~~~~~PvlGiN~G------------------~LGFLt~~~~~~~~~~l~~vl~g~~~v~~ 170 (365)
T 3pfn_A 109 IDFIICLGGDGTLLYASSLFQGSVPPVMAFHLG------------------SLGFLTPFSFENFQSQVTQVIEGNAAVVL 170 (365)
T ss_dssp CSEEEEESSTTHHHHHHHHCSSSCCCEEEEESS------------------SCTTTCCEESTTHHHHHHHHHHSCCBEEE
T ss_pred CCEEEEEcChHHHHHHHHHhccCCCCEEEEcCC------------------CCccceeecHHHHHHHHHHHHcCCCeEEE
Confidence 999999999999999998754 57999999999 89999999999999999999999999999
Q ss_pred cceEEEEec----------------------------Ccc-cCcccccchhhhcCCccccceeEEEEecCCCCCCCCccc
Q 021432 155 LSRILIRVN----------------------------SKS-LPTFALNDILIAHPCPAMVSRFSFKIKSDGMPCSPLVNC 205 (312)
Q Consensus 155 ~~rl~~~~~----------------------------g~~-~~~~ALNDv~I~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 205 (312)
|+|+++.+. |+. ...+|||||+|.+...+++++++++++ ++ ++.+|
T Consensus 171 R~~L~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ALNEvvI~r~~~~~m~~~~v~id--g~---~~~~~ 245 (365)
T 3pfn_A 171 RSRLKVRVVKELRGKKTAVHNGLGEKGSQAAGLDMDVGKQAMQYQVLNEVVIDRGPSSYLSNVDVYLD--GH---LITTV 245 (365)
T ss_dssp ECCEEEEEEC-----------------------------CEEEEEESSEEEEECTTCSSCCCEEEEET--TE---EEEEE
T ss_pred EeeEEEEEEeccccccccccccccccccccccccccCCceeeccCccceEEEecCCCCcEEEEEEEEC--CE---EEEEE
Confidence 999998763 332 246899999999988888999998885 54 57899
Q ss_pred ccCCeeeeecccchHHHHhcCCeeecccccchhhhhhccCCccchhhhhhhccccCCceeeEEEee---ecceEEEcCcc
Q 021432 206 RSSGLRVSTAAGSSAAMLSAGGFIMPILSHDLQYMVREPISPAAATSSLIHGLVKSDQSMEAMWFC---KEGFVYIDGSH 282 (312)
Q Consensus 206 ~gDGviVsTptGSTAY~lSAGG~v~Pi~~p~l~~~v~tPi~p~~l~~~~~~~vv~~~~~i~i~~~~---~~~~l~iDG~~ 282 (312)
+||||||||||||||||||||| ||++|+++++++||||||+++.||+ |++++.+|+|++.. ..+.+++||+
T Consensus 246 ~aDGlIVSTPTGSTAYslSAGG---PIv~P~~~~i~ltPI~PhsLs~RPi--Vlp~~~~I~i~v~~~~~~~~~vs~DG~- 319 (365)
T 3pfn_A 246 QGDGVIVSTPTGSTAYAAAAGA---SMIHPNVPAIMITPICPHSLSFRPI--VVPAGVELKIMLSPEARNTAWVSFDGR- 319 (365)
T ss_dssp CSSEEEEECGGGGGTHHHHTTC---CEECTTSCCEEEEEESCSSTTCCCE--EECTTCCEEEEECTTCSSCEEEEETTE-
T ss_pred ecCeEEEeCCccHHHHHHhCCC---CccCCCCCeEEEEeccCCccCCCce--EECCCCEEEEEEccCCCCcEEEEEcCC-
Confidence 9999999999999999999999 9999999999999999999999998 88888889988642 2467899998
Q ss_pred eEEEeecCCeEEEccCCCeeeeecCC
Q 021432 283 VFVSIQNGDVIEISSKAPALKVFLPP 308 (312)
Q Consensus 283 ~~~~l~~gd~v~I~~s~~~~~l~~~~ 308 (312)
...++.+||+|+|++++.+++++...
T Consensus 320 ~~~~l~~gd~V~I~~s~~~~~li~~~ 345 (365)
T 3pfn_A 320 KRQEIRHGDSISITTSCYPLPSICVR 345 (365)
T ss_dssp EEEEECTTCEEEEEECSSCEEEECSS
T ss_pred eeeecCCCCEEEEEECCCceEEEEeC
Confidence 57899999999999999999998543
No 2
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=100.00 E-value=2.1e-54 Score=401.16 Aligned_cols=201 Identities=27% Similarity=0.410 Sum_probs=181.3
Q ss_pred ccccccEEEEEcCCcceEeecccCC-CCcceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhcCcc
Q 021432 72 PIRNVDLVVTVGGDGTLLQAGHLID-DSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILEGKT 150 (312)
Q Consensus 72 ~~~~~Dlvi~lGGDGT~L~a~~~~~-~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~g~~ 150 (312)
.++++|+||++|||||+|+|+|.+. . +|++|||+| ++||||++++++++++++++++ +|
T Consensus 65 ~~~~~DlvIvlGGDGT~L~aa~~~~~~-~PilGIN~G------------------~lGFLt~~~~~~~~~~l~~l~~-~~ 124 (278)
T 1z0s_A 65 ELENFDFIVSVGGDGTILRILQKLKRC-PPIFGINTG------------------RVGLLTHASPENFEVELKKAVE-KF 124 (278)
T ss_dssp GGGGSSEEEEEECHHHHHHHHTTCSSC-CCEEEEECS------------------SSCTTCCBBTTBCHHHHHHHHH-HC
T ss_pred ccCCCCEEEEECCCHHHHHHHHHhCCC-CcEEEECCC------------------CCccccccCHHHHHHHHHHHHh-hC
Confidence 3468999999999999999998764 5 999999999 8999999999999999999999 99
Q ss_pred ccCccceEEEEecCcccCcccccchhhhcCCccccceeEEEEecCCCCCCCCcccccCCeeeeecccchHHHHhcCCeee
Q 021432 151 VPSNLSRILIRVNSKSLPTFALNDILIAHPCPAMVSRFSFKIKSDGMPCSPLVNCRSSGLRVSTAAGSSAAMLSAGGFIM 230 (312)
Q Consensus 151 ~~~~~~rl~~~~~g~~~~~~ALNDv~I~~~~~~~~~~~~~~v~~~~~~~~~~~~~~gDGviVsTptGSTAY~lSAGG~v~ 230 (312)
.+++|+++++ +.++. .+||||++|.+..++++++++++++ ++ ++.+|+|||+|||||||||||++||||
T Consensus 125 ~i~~r~~L~~-v~~~~--~~ALNEv~I~~~~~~~~~~~~v~id--g~---~~~~~~~DGlIVsTPTGSTAY~lSAGG--- 193 (278)
T 1z0s_A 125 EVERFPRVSC-SAMPD--VLALNEIAVLSRKPAKMIDVALRVD--GV---EVDRIRCDGFIVATQIGSTGYAFSAGG--- 193 (278)
T ss_dssp CEEEECCEEE-TTEEE--EEESSEEEEEESSTTCCEEEEEEET--TE---EEEEEEESEEEEEESGGGGTHHHHTTC---
T ss_pred eEEEeEEEEE-EECCC--cEEEEEEEEecCCCccEEEEEEEEC--CE---EEEEEecCeEEEecCCchhHHHhhCCC---
Confidence 9999999999 86654 6899999999988889999998885 44 578899999999999999999999999
Q ss_pred cccccchhhhhhccCCccchhhhhhhccccCCceeeEEEeeecceEEEcCcceEEEeecCCeEEEccCCCeeeeecCCCC
Q 021432 231 PILSHDLQYMVREPISPAAATSSLIHGLVKSDQSMEAMWFCKEGFVYIDGSHVFVSIQNGDVIEISSKAPALKVFLPPNL 310 (312)
Q Consensus 231 Pi~~p~l~~~v~tPi~p~~l~~~~~~~vv~~~~~i~i~~~~~~~~l~iDG~~~~~~l~~gd~v~I~~s~~~~~l~~~~~~ 310 (312)
||++|+++++++||||||+++.||+ +++++.+|+++ ..++.+++||+ . ++++|++|+|++++..+++ ++++
T Consensus 194 pIv~P~~~~l~ltPI~P~~l~~Rpi--Vl~~~~~i~i~--~~~~~l~~DG~-~--~l~~g~~v~I~~s~~~~~l--~~~~ 264 (278)
T 1z0s_A 194 PVVEPYLECFILIPIAPFRFGWKPY--VVSMERKIEVI--AEKAIVVADGQ-K--SVDFDGEITIEKSEFPAVF--FKNE 264 (278)
T ss_dssp CEECTTSCCEEEEEESCCSSBCCCE--EECTTSCEEEE--EEEEEEEETTT-E--EEEEEEEEEEEECSCCEEE--ECCT
T ss_pred ceeCCCCCeEEEEEeCCCCCCCCcE--EECCCCEEEEE--eCcEEEEEcCC-e--ecCCCcEEEEEECCCeeEe--CCCC
Confidence 9999999999999999999998887 88888889987 56789999997 4 8999999999999999999 4555
Q ss_pred CC
Q 021432 311 VY 312 (312)
Q Consensus 311 ~~ 312 (312)
+|
T Consensus 265 ~f 266 (278)
T 1z0s_A 265 KR 266 (278)
T ss_dssp TH
T ss_pred CH
Confidence 54
No 3
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-53 Score=412.21 Aligned_cols=262 Identities=18% Similarity=0.265 Sum_probs=204.3
Q ss_pred cccccccccccCCCcccccchhHHHhhhhh--hhhhhhhHHHHHHhhhc-CCc------cee-ecccccCCCccccccEE
Q 021432 10 LKPFDVYTVRQSNGISHITNPLILQHLENR--CKVHKDAINFCQDILSK-KPI------EWE-PVFRNNLSRPIRNVDLV 79 (312)
Q Consensus 10 ~k~~~i~~n~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~l~~-~~~------~~~-~~~~~~l~~~~~~~Dlv 79 (312)
||++.++.|.. +..+...+.++.+||+.+ +....- .....+.+.. ... ... ...........+++|+|
T Consensus 41 ~k~V~II~n~~-~~~~~~~~~~l~~~L~~~~~gi~V~v-e~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DlV 118 (388)
T 3afo_A 41 LQNVYITKKPW-TPSTREAMVEFITHLHESYPEVNVIV-QPDVAEEISQDFKSPLENDPNRPHILYTGPEQDIVNRTDLL 118 (388)
T ss_dssp CCEEEEEECTT-CHHHHHHHHHHHHHHHHHCTTCEEEC-CHHHHHHHHTTCCSCGGGCTTSCEEEEECCHHHHHHHCSEE
T ss_pred CcEEEEEEeCC-CHHHHHHHHHHHHHHHHhCCCeEEEE-eCchhhhhhhhccccccccccccccccccchhhcccCCCEE
Confidence 45566677655 566777889999999998 432111 1222222211 100 000 00000001113468999
Q ss_pred EEEcCCcceEeecccCC-CCc-ceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhcCccccCccce
Q 021432 80 VTVGGDGTLLQAGHLID-DSI-PVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILEGKTVPSNLSR 157 (312)
Q Consensus 80 i~lGGDGT~L~a~~~~~-~~~-PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~g~~~~~~~~r 157 (312)
|++|||||+|+|++.+. .++ |++|||+| ++|||+++++++++++++++++|+|.+++|++
T Consensus 119 IvlGGDGTlL~aa~~~~~~~vpPiLGIN~G------------------~lGFLt~~~~~~~~~al~~il~g~~~~~~r~~ 180 (388)
T 3afo_A 119 VTLGGDGTILHGVSMFGNTQVPPVLAFALG------------------TLGFLSPFDFKEHKKVFQEVISSRAKCLHRTR 180 (388)
T ss_dssp EEEESHHHHHHHHHTTTTSCCCCEEEEECS------------------SCCSSCCEEGGGHHHHHHHHHTTCCEEEEECC
T ss_pred EEEeCcHHHHHHHHHhcccCCCeEEEEECC------------------CcccCCcCChHHHHHHHHHHhcCCceEEEeeE
Confidence 99999999999998764 567 89999999 89999999999999999999999999999999
Q ss_pred EEEEe--cCcc--cCcccccchhhhcCCccccceeEEEEecCCCCCCCCcccccCCeeeeecccchHHHHhcCCeeeccc
Q 021432 158 ILIRV--NSKS--LPTFALNDILIAHPCPAMVSRFSFKIKSDGMPCSPLVNCRSSGLRVSTAAGSSAAMLSAGGFIMPIL 233 (312)
Q Consensus 158 l~~~~--~g~~--~~~~ALNDv~I~~~~~~~~~~~~~~v~~~~~~~~~~~~~~gDGviVsTptGSTAY~lSAGG~v~Pi~ 233 (312)
|++.+ +|+. ...+||||++|.+...++++.++++++ ++ ++.+|+|||||||||||||||+||||| ||+
T Consensus 181 L~~~v~~~~~~~~~~~~ALNev~i~~~~~~~~~~~~v~id--~~---~~~~~~~DGliVsTPTGSTAYslSAGG---pIv 252 (388)
T 3afo_A 181 LECHLKKKDSNSSIVTHAMNDIFLHRGNSPHLTNLDIFID--GE---FLTRTTADGVALATPTGSTAYSLSAGG---SIV 252 (388)
T ss_dssp EEEEEECTTCCCCEEEEESSEEEEECTTCSSCEEEEEEET--TE---EEEEEEEEEEEEECTGGGGTHHHHTTC---CEE
T ss_pred EEEEEEeCCccchhhheeeceEEEecCCCCcEEEEEEEEC--CE---EEEeecCCeEEEeCCCcHHHHHHhccC---Ccc
Confidence 99876 3443 246899999999988888888888884 54 578899999999999999999999999 999
Q ss_pred ccchhhhhhccCCccchhhhhhhccccCCceeeEEEee--------ecceEEEcCcceEEEeecCCeEEEccCCCee
Q 021432 234 SHDLQYMVREPISPAAATSSLIHGLVKSDQSMEAMWFC--------KEGFVYIDGSHVFVSIQNGDVIEISSKAPAL 302 (312)
Q Consensus 234 ~p~l~~~v~tPi~p~~l~~~~~~~vv~~~~~i~i~~~~--------~~~~l~iDG~~~~~~l~~gd~v~I~~s~~~~ 302 (312)
+|.++++++||||||+++.||+ |++++..|+|++.. .++.+++||+ ...++.+||+|+|++++..+
T Consensus 253 ~P~~~~~~ltPI~Ph~l~~Rpi--Vl~~~~~i~i~v~~~~~~~~~~~~~~l~~DG~-~~~~l~~gd~v~v~~s~~~~ 326 (388)
T 3afo_A 253 SPLVPAILMTPICPRSLSFRPL--ILPHSSHIRIKIGSKLNQKPVNSVVKLSVDGI-PQQDLDVGDEIYVINEVGTI 326 (388)
T ss_dssp CTTSCEEEEEEEEESCSCCCCE--EEETTCCEEEEECCCSSCSCSSSCEEEEETTE-EEEEECTTCEEEEEESSCCC
T ss_pred cCCCCceEEeeecCCcccCCCe--EECCCCEEEEEEccccccccccccEEEEEcCC-cceecCCCCEEEEEECCcee
Confidence 9999999999999999999987 88888889888643 2468999997 67899999999999988766
No 4
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=100.00 E-value=2.7e-50 Score=379.38 Aligned_cols=271 Identities=23% Similarity=0.299 Sum_probs=207.3
Q ss_pred cccccccccccCCCcccccchhHHHhhhhhhhhhhhhHHHHHH---------hhhcCCcceeecccccCCCccccccEEE
Q 021432 10 LKPFDVYTVRQSNGISHITNPLILQHLENRCKVHKDAINFCQD---------ILSKKPIEWEPVFRNNLSRPIRNVDLVV 80 (312)
Q Consensus 10 ~k~~~i~~n~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---------~l~~~~~~~~~~~~~~l~~~~~~~Dlvi 80 (312)
||++.++.|.. +........++.+||++++....-....... .+++.+.......+.. ...+++|+||
T Consensus 4 m~ki~iI~n~~-~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~d~vi 80 (307)
T 1u0t_A 4 HRSVLLVVHTG-RDEATETARRVEKVLGDNKIALRVLSAEAVDRGSLHLAPDDMRAMGVEIEVVDADQ--HAADGCELVL 80 (307)
T ss_dssp -CEEEEEESSS-GGGGSHHHHHHHHHHHTTTCEEEEEC-------------------------------------CCCEE
T ss_pred CCEEEEEEeCC-CHHHHHHHHHHHHHHHHCCCEEEEecchhhhhhccccccccccccccccccccccc--ccccCCCEEE
Confidence 45666667665 4455566788999999998632211111110 0111111111111110 1235789999
Q ss_pred EEcCCcceEeecccC-CCCcceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhcCccccCccceEE
Q 021432 81 TVGGDGTLLQAGHLI-DDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILEGKTVPSNLSRIL 159 (312)
Q Consensus 81 ~lGGDGT~L~a~~~~-~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~g~~~~~~~~rl~ 159 (312)
++|||||+|++++.+ ..++|++|||+| ++|||+++.+++++++++++++|+|.+++|++++
T Consensus 81 ~~GGDGT~l~a~~~~~~~~~pvlgi~~G------------------~~gfl~~~~~~~~~~~~~~i~~g~~~~~~r~~l~ 142 (307)
T 1u0t_A 81 VLGGDGTFLRAAELARNASIPVLGVNLG------------------RIGFLAEAEAEAIDAVLEHVVAQDYRVEDRLTLD 142 (307)
T ss_dssp EEECHHHHHHHHHHHHHHTCCEEEEECS------------------SCCSSCSEEGGGHHHHHHHHHHTCCEEEEECCEE
T ss_pred EEeCCHHHHHHHHHhccCCCCEEEEeCC------------------CCccCcccCHHHHHHHHHHHHcCCcEEEEEEEEE
Confidence 999999999999865 346899999998 7999999999999999999999999999999998
Q ss_pred EEe--cCccc-CcccccchhhhcCCccccceeEEEEecCCCCCCCCcccccCCeeeeecccchHHHHhcCCeeecccccc
Q 021432 160 IRV--NSKSL-PTFALNDILIAHPCPAMVSRFSFKIKSDGMPCSPLVNCRSSGLRVSTAAGSSAAMLSAGGFIMPILSHD 236 (312)
Q Consensus 160 ~~~--~g~~~-~~~ALNDv~I~~~~~~~~~~~~~~v~~~~~~~~~~~~~~gDGviVsTptGSTAY~lSAGG~v~Pi~~p~ 236 (312)
+.+ +|+.. ..+||||+++.+...+++.++++++ |++ ++.+|++||+|||||||||||++|||| |+++|+
T Consensus 143 ~~v~~~g~~~~~~~ALNev~i~~~~~~~~~~~~v~i--dg~---~~~~~~~dGlivsTptGSTaY~lSaGG---piv~P~ 214 (307)
T 1u0t_A 143 VVVRQGGRIVNRGWALNEVSLEKGPRLGVLGVVVEI--DGR---PVSAFGCDGVLVSTPTGSTAYAFSAGG---PVLWPD 214 (307)
T ss_dssp EEEEETTEEEEEEEESSEEEEECSSSSSCEEEEEES--SSS---EEEEEEESEEEEECTGGGGTHHHHTTC---CEECTT
T ss_pred EEEEeCccceeceeeeeeEEEecCCCceEEEEEEEE--CCE---EEEEEcCCEEEEccchhhHHHHhcCCC---CccCCC
Confidence 765 56542 3579999999987777888877777 454 567899999999999999999999999 899999
Q ss_pred hhhhhhccCCccchhhhhhhccccCCceeeEEEe--eecceEEEcCcceEEEeecCCeEEEccCCCeeeeecCCCCCC
Q 021432 237 LQYMVREPISPAAATSSLIHGLVKSDQSMEAMWF--CKEGFVYIDGSHVFVSIQNGDVIEISSKAPALKVFLPPNLVY 312 (312)
Q Consensus 237 l~~~v~tPi~p~~l~~~~~~~vv~~~~~i~i~~~--~~~~~l~iDG~~~~~~l~~gd~v~I~~s~~~~~l~~~~~~~~ 312 (312)
+++++++|+|||.++.||+ +++++.+|+|++. ..++.+++||+ ...++++|++|+|+.+++.++++.+++++|
T Consensus 215 ~~~~~l~pi~p~~l~~rp~--v~~~~~~i~i~v~~~~~~~~~~~DG~-~~~~l~~g~~i~i~~~~~~~~li~~~~~~~ 289 (307)
T 1u0t_A 215 LEAILVVPNNAHALFGRPM--VTSPEATIAIEIEADGHDALVFCDGR-REMLIPAGSRLEVTRCVTSVKWARLDSAPF 289 (307)
T ss_dssp CCCEEEEEESCSSSCCCCE--EECTTCCEEEEECTTSCCEEEEETTT-EEEEECTTCEEEEEECSSCEEEEECSCCCH
T ss_pred CCeEEEEeecCccccCCCE--EECCCCEEEEEEecCCCCEEEEECCC-eEEecCCCCEEEEEECCCeeEEEEeCCCCH
Confidence 9999999999999998887 7888888988764 35678999998 578999999999999999999999988876
No 5
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=100.00 E-value=1.4e-47 Score=355.10 Aligned_cols=207 Identities=17% Similarity=0.240 Sum_probs=179.7
Q ss_pred ccccEEEEEcCCcceEeecccC-CC--CcceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhcCcc
Q 021432 74 RNVDLVVTVGGDGTLLQAGHLI-DD--SIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILEGKT 150 (312)
Q Consensus 74 ~~~Dlvi~lGGDGT~L~a~~~~-~~--~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~g~~ 150 (312)
+++|+||++|||||+|++++.+ +. ++|++|||+| ++|||+++.+++++++++++++|+|
T Consensus 34 ~~~D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G------------------~lgfl~~~~~~~~~~~l~~l~~g~~ 95 (272)
T 2i2c_A 34 VEPEIVISIGGDGTFLSAFHQYEERLDEIAFIGIHTG------------------HLGFYADWRPAEADKLVKLLAKGEY 95 (272)
T ss_dssp SSCSEEEEEESHHHHHHHHHHTGGGTTTCEEEEEESS------------------SCCSSCCBCGGGHHHHHHHHHTTCC
T ss_pred CCCCEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCC------------------CCCcCCcCCHHHHHHHHHHHHcCCC
Confidence 4689999999999999999865 33 7999999999 7999999999999999999999999
Q ss_pred ccCccceEEEEe---cCccc-CcccccchhhhcCCccccceeEEEEecCCCCCCCCcccccCCeeeeecccchHHHHhcC
Q 021432 151 VPSNLSRILIRV---NSKSL-PTFALNDILIAHPCPAMVSRFSFKIKSDGMPCSPLVNCRSSGLRVSTAAGSSAAMLSAG 226 (312)
Q Consensus 151 ~~~~~~rl~~~~---~g~~~-~~~ALNDv~I~~~~~~~~~~~~~~v~~~~~~~~~~~~~~gDGviVsTptGSTAY~lSAG 226 (312)
.+++++++++.+ +|+.. ..+||||++|.+. +++.+++++++ ++ ++.+|++||+|||||||||||++|||
T Consensus 96 ~i~~r~~L~~~v~~~~g~~~~~~~ALNev~i~~~--~~~~~~~i~id--g~---~~~~~~~DGlivsTptGSTaY~~SaG 168 (272)
T 2i2c_A 96 QKVSYPLLKTTVKYGIGKKEATYLALNESTVKSS--GGPFVVDVVIN--DI---HFERFRGDGLCMSTPSGTTAYNKSLG 168 (272)
T ss_dssp EEEEEEEEEEEEEESSSCCEEEEEESSEEEEEES--SSCEEEEEEET--TE---EEEEEEESEEEEECTGGGGTHHHHTT
T ss_pred EEEEEEEEEEEEEeCCCcEEeHHhhhhHhhhccc--CcEEEEEEEEC--CE---EEEEEECCEEEEEccccHHHHHHcCC
Confidence 999999988776 45542 4689999999874 47778888884 44 57889999999999999999999999
Q ss_pred CeeecccccchhhhhhccCCccchh-----hhhhhccccCCceeeEEEe-eecceEEEcCcceEEEeecCCeEEEccCCC
Q 021432 227 GFIMPILSHDLQYMVREPISPAAAT-----SSLIHGLVKSDQSMEAMWF-CKEGFVYIDGSHVFVSIQNGDVIEISSKAP 300 (312)
Q Consensus 227 G~v~Pi~~p~l~~~v~tPi~p~~l~-----~~~~~~vv~~~~~i~i~~~-~~~~~l~iDG~~~~~~l~~gd~v~I~~s~~ 300 (312)
| |+++|++++++++|||||++. .+|+ +++++++++|++. ..++.+++||+ . ..+.+|++|+|+.++.
T Consensus 169 G---piv~P~~~~~~ltpi~p~~l~~~r~~~~p~--v~~~~~~i~i~~~~~~~~~~~~DG~-~-~~~~~~~~v~i~~~~~ 241 (272)
T 2i2c_A 169 G---ALMHPSIEAMQLTEMASINNRVYRTIGSPL--VFPKHHVVSLQPVNDKDFQISVDHL-S-ILHRDVQEIRYEVSAK 241 (272)
T ss_dssp C---CCCCTTSCEEEEEEESCCCSSSCCCCCSCE--EEETTCCEEEEESSCCCEEEEETTE-E-EEECSEEEEEEEEEEE
T ss_pred C---CeeCCCCCceEEeCCCCccchhhhccCCcE--EeCCCCEEEEEEcCCCCEEEEECCC-E-eecCCCCEEEEEEcCC
Confidence 9 999999999999999999887 3465 7787888998753 34578999997 4 6789999999999999
Q ss_pred eeeeecCCCCCC
Q 021432 301 ALKVFLPPNLVY 312 (312)
Q Consensus 301 ~~~l~~~~~~~~ 312 (312)
.++++.+++++|
T Consensus 242 ~~~~i~~~~~~f 253 (272)
T 2i2c_A 242 KIHFARFRSFPF 253 (272)
T ss_dssp EEEEEECSCCCH
T ss_pred EEEEEEeCCCCH
Confidence 999999988876
No 6
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=100.00 E-value=1.3e-47 Score=357.80 Aligned_cols=267 Identities=23% Similarity=0.311 Sum_probs=205.5
Q ss_pred cccccccccccCCCcccccchhHHHhhhhhhhhhhhhHHHHHHhhhcCCcceeecccccCCCccccccEEEEEcCCcceE
Q 021432 10 LKPFDVYTVRQSNGISHITNPLILQHLENRCKVHKDAINFCQDILSKKPIEWEPVFRNNLSRPIRNVDLVVTVGGDGTLL 89 (312)
Q Consensus 10 ~k~~~i~~n~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~Dlvi~lGGDGT~L 89 (312)
||++.++.|.. +........++.+||++++....-. ......+...+.. ....+. ...++|+||++|||||+|
T Consensus 5 mkki~ii~np~-~~~~~~~~~~i~~~l~~~g~~v~~~-~~~~~~~~~~~~~--~~~~~~---~~~~~D~vi~~GGDGT~l 77 (292)
T 2an1_A 5 FKCIGIVGHPR-HPTALTTHEMLYRWLCDQGYEVIVE-QQIAHELQLKNVP--TGTLAE---IGQQADLAVVVGGDGNML 77 (292)
T ss_dssp CCEEEEECC--------CHHHHHHHHHHHTTCEEEEE-HHHHHHTTCSSCC--EECHHH---HHHHCSEEEECSCHHHHH
T ss_pred CcEEEEEEcCC-CHHHHHHHHHHHHHHHHCCCEEEEe-cchhhhccccccc--ccchhh---cccCCCEEEEEcCcHHHH
Confidence 67777888865 4555667788999999988643211 1111111111111 010111 124689999999999999
Q ss_pred eecccC-CCCcceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhcCccccCccceEEEEe--cCcc
Q 021432 90 QAGHLI-DDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILEGKTVPSNLSRILIRV--NSKS 166 (312)
Q Consensus 90 ~a~~~~-~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~g~~~~~~~~rl~~~~--~g~~ 166 (312)
++++.+ +.++|++|||+| ++|||+++.+++++++++.+++|+|.+++|+++.+.+ +|+.
T Consensus 78 ~a~~~~~~~~~P~lGI~~G------------------t~gfla~~~~~~~~~al~~i~~g~~~~~~r~~l~~~~~~~~~~ 139 (292)
T 2an1_A 78 GAARTLARYDINVIGINRG------------------NLGFLTDLDPDNALQQLSDVLEGRYISEKRFLLEAQVCQQDRQ 139 (292)
T ss_dssp HHHHHHTTSSCEEEEBCSS------------------SCCSSCCBCTTSHHHHHHHHHTTCEEEEEEEEEEEEEECC---
T ss_pred HHHHHhhcCCCCEEEEECC------------------CcccCCcCCHHHHHHHHHHHHcCCCEEEEeEEEEEEEEeCCce
Confidence 999764 457999999998 7999999999999999999999999999988888876 3443
Q ss_pred c-CcccccchhhhcCCccccceeEEEEecCCCCCCCCcccccCCeeeeecccchHHHHhcCCeeecccccchhhhhhccC
Q 021432 167 L-PTFALNDILIAHPCPAMVSRFSFKIKSDGMPCSPLVNCRSSGLRVSTAAGSSAAMLSAGGFIMPILSHDLQYMVREPI 245 (312)
Q Consensus 167 ~-~~~ALNDv~I~~~~~~~~~~~~~~v~~~~~~~~~~~~~~gDGviVsTptGSTAY~lSAGG~v~Pi~~p~l~~~v~tPi 245 (312)
. ..+||||+++.+....++.+++++++ ++ .+.++++||+|||||||||||++|||| |+++|++++++++|+
T Consensus 140 ~~~~~alnev~i~~~~~~~~~~~~v~id--g~---~~~~~~~dglivstptGSTay~~SaGG---~iv~P~~~~~~l~pi 211 (292)
T 2an1_A 140 KRISTAINEVVLHPGKVAHMIEFEVYID--ET---FAFSQRSDGLIISTPTGSTAYSLSAGG---PILTPSLDAITLVPM 211 (292)
T ss_dssp -CEEEESSEEEEEESSTTCCEEEEEEET--TE---EEEEEEESEEEEECTGGGGTHHHHTTC---CEECTTCSEEEEEEE
T ss_pred EeeeeEeeeEEEecCCCCceEEEEEEEC--CE---EEEEEEeCEEEECCCCchHHHHHhCCC---CCCCCCCCeEEEEec
Confidence 2 36899999999877678888888774 54 466799999999999999999999999 889999999999999
Q ss_pred CccchhhhhhhccccCCceeeEEEe--eecceEEEcCcceEEEeecCCeEEEccCCCeeeeecCCCCCC
Q 021432 246 SPAAATSSLIHGLVKSDQSMEAMWF--CKEGFVYIDGSHVFVSIQNGDVIEISSKAPALKVFLPPNLVY 312 (312)
Q Consensus 246 ~p~~l~~~~~~~vv~~~~~i~i~~~--~~~~~l~iDG~~~~~~l~~gd~v~I~~s~~~~~l~~~~~~~~ 312 (312)
|||.++.||+ +++++.+++|++. ..+..+.+||+ ...++++|+.|+|+.+++.++++.+++++|
T Consensus 212 ~p~~l~~r~i--v~~~~~~i~i~~~~~~~~~~~~~DG~-~~~~~~~~~~v~i~~~~~~~~li~~~~~~~ 277 (292)
T 2an1_A 212 FPHTLSARPL--VINSSSTIRLRFSHRRSDLEISCDSQ-IALPIQEGEDVLIRRCDYHLNLIHPKDYSY 277 (292)
T ss_dssp SCSSTTCCCE--EEETTCCEEEEECC---CEEEEETTS-CCEEECTTCEEEEEEEEEEEEEEEETTCCH
T ss_pred CcCcCCCCCE--EECCCCEEEEEEccCCCceEEEECCC-eEEecCCCcEEEEEECCCEEEEEEeCCCCH
Confidence 9999988887 7888888998864 34678899998 578999999999999999999999988876
No 7
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=100.00 E-value=2.2e-46 Score=344.68 Aligned_cols=203 Identities=23% Similarity=0.383 Sum_probs=179.6
Q ss_pred ccccEEEEEcCCcceEeecccC-CCCcceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhcCcccc
Q 021432 74 RNVDLVVTVGGDGTLLQAGHLI-DDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILEGKTVP 152 (312)
Q Consensus 74 ~~~Dlvi~lGGDGT~L~a~~~~-~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~g~~~~ 152 (312)
+++|+||++|||||+|++++.+ + ++|++|||+| ++|||+++.+++++++++++++|+|.+
T Consensus 40 ~~~D~vv~~GGDGTll~~a~~~~~-~~PilGIn~G------------------~~Gfl~~~~~~~~~~al~~i~~g~~~i 100 (258)
T 1yt5_A 40 VTADLIVVVGGDGTVLKAAKKAAD-GTPMVGFKAG------------------RLGFLTSYTLDEIDRFLEDLRNWNFRE 100 (258)
T ss_dssp BCCSEEEEEECHHHHHHHHTTBCT-TCEEEEEESS------------------SCCSSCCBCGGGHHHHHHHHHTTCCEE
T ss_pred CCCCEEEEEeCcHHHHHHHHHhCC-CCCEEEEECC------------------CCCccCcCCHHHHHHHHHHHHcCCceE
Confidence 5789999999999999999864 5 8999999998 799999999999999999999999999
Q ss_pred CccceEEEEecCcccCcccccchhhhcCCccccceeEEEEecCCCCCCCCcccccCCeeeeecccchHHHHhcCCeeecc
Q 021432 153 SNLSRILIRVNSKSLPTFALNDILIAHPCPAMVSRFSFKIKSDGMPCSPLVNCRSSGLRVSTAAGSSAAMLSAGGFIMPI 232 (312)
Q Consensus 153 ~~~~rl~~~~~g~~~~~~ALNDv~I~~~~~~~~~~~~~~v~~~~~~~~~~~~~~gDGviVsTptGSTAY~lSAGG~v~Pi 232 (312)
++|+++++.+.+. ..+||||+++.+....++.+++++++ ++ .+.++++||+|||||||||||++|||| |+
T Consensus 101 ~~r~~l~~~~~~~--~~~alNev~i~~~~~~~~~~~~v~id--g~---~~~~~~~dGlivsTptGSTaY~~SaGG---pi 170 (258)
T 1yt5_A 101 ETRWFIQIESELG--NHLALNDVTLERDLSGKMVEIEVEVE--HH---SSMWFFADGVVISTPTGSTAYSLSIGG---PI 170 (258)
T ss_dssp EEEEEEEEEETTE--EEEESSEEEEECCTTSCCEEEEEEET--TS---CCEEEEESEEEEECTGGGGTTTTTTTC---CC
T ss_pred EEEEEEEEEEcCC--cceeeeEEEEecCCCCceEEEEEEEC--CE---EEEEEEccEEEEEcCCCcHHHHhhCCC---cc
Confidence 9988888877554 36899999999986778888888884 54 467899999999999999999999999 99
Q ss_pred cccchhhhhhccCCccchhhhhhhccccCCceeeEEEeeecceEEEcCcceEEEeecCCeEEEccCCCeeeeecCCCCCC
Q 021432 233 LSHDLQYMVREPISPAAATSSLIHGLVKSDQSMEAMWFCKEGFVYIDGSHVFVSIQNGDVIEISSKAPALKVFLPPNLVY 312 (312)
Q Consensus 233 ~~p~l~~~v~tPi~p~~l~~~~~~~vv~~~~~i~i~~~~~~~~l~iDG~~~~~~l~~gd~v~I~~s~~~~~l~~~~~~~~ 312 (312)
++|++++++++|+|||.++.||+ +++++.+|+|++ .++..+.+||+ ....+.+ |+|+.+++.++++.+++++|
T Consensus 171 v~P~~~~~~i~pi~p~~l~~rp~--v~~~~~~i~i~~-~~~~~~~~DG~-~~~~~~~---i~i~~~~~~~~li~~~~~~~ 243 (258)
T 1yt5_A 171 IFPECEVLEISPIAPQFFLTRSV--VIPSNFKVVVES-QRDINMLVDGV-LTGKTKR---IEVKKSRRYVRILRPPEYDY 243 (258)
T ss_dssp CCTTCCEEEEEEESCSTTCCCCE--EEETTSCEEEEE-EEEEEEEETTE-EEEEEEE---EEEEEEEEEEEEEECTTCCH
T ss_pred cCCCCCEEEEEEeccccccCCCE--EECCCCEEEEEE-CCCEEEEECCC-cceeeEE---EEEEECCCeEEEEEcCCCCH
Confidence 99999999999999999988887 778788899986 56778999997 4556655 99999999999999988876
No 8
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=99.79 E-value=1e-19 Score=172.50 Aligned_cols=241 Identities=17% Similarity=0.080 Sum_probs=154.5
Q ss_pred hcccccccccccC-CCcccccchhHHHhhhhhhhhhhhh----HHHHHHhhhcCCcceeecccccCCCccccccEEEEEc
Q 021432 9 LLKPFDVYTVRQS-NGISHITNPLILQHLENRCKVHKDA----INFCQDILSKKPIEWEPVFRNNLSRPIRNVDLVVTVG 83 (312)
Q Consensus 9 ~~k~~~i~~n~~~-~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~Dlvi~lG 83 (312)
+||++.++.|..+ +..+.....++..+|+.++...... .....++. ++. ..+++|+||++|
T Consensus 23 ~m~~i~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~~~~~a~~~~-----------~~~---~~~~~d~vvv~G 88 (337)
T 2qv7_A 23 MRKRARIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEKIGDATLEA-----------ERA---MHENYDVLIAAG 88 (337)
T ss_dssp CCEEEEEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCSTTHHHHHH-----------HHH---TTTTCSEEEEEE
T ss_pred ccceEEEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEecCcchHHHHH-----------HHH---hhcCCCEEEEEc
Confidence 4678888999875 2233444566777777766421100 00000000 000 113589999999
Q ss_pred CCcceEeecccC---CCCcceeeccCCCCchhHHhhhhhccccccccccchHH--hhhcHHHHHHHHhcCcccc------
Q 021432 84 GDGTLLQAGHLI---DDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAA--TVNNFEQLLDNILEGKTVP------ 152 (312)
Q Consensus 84 GDGT~L~a~~~~---~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~--~~~~~~~~l~~l~~g~~~~------ 152 (312)
||||++.+++.+ +.++|+.+|+.| +.++|+.. -+.+++++++.+++|++..
T Consensus 89 GDGTv~~v~~~l~~~~~~~pl~iIP~G------------------T~N~lAr~Lg~~~~~~~al~~i~~g~~~~iD~g~v 150 (337)
T 2qv7_A 89 GDGTLNEVVNGIAEKPNRPKLGVIPMG------------------TVNDFGRALHIPNDIMGALDVIIEGHSTKVDIGKM 150 (337)
T ss_dssp CHHHHHHHHHHHTTCSSCCEEEEEECS------------------SCCHHHHHTTCCSSHHHHHHHHHHTCEEEEEEEEE
T ss_pred CchHHHHHHHHHHhCCCCCcEEEecCC------------------cHhHHHHHcCCCCCHHHHHHHHHcCCcEEEEEEEE
Confidence 999999998643 457999999999 56777766 3678999999999998763
Q ss_pred CccceE-EEEec-----------------Cccc-CcccccchhhhcCCccccceeEEEEecCCCCCCCCcccccCCeeee
Q 021432 153 SNLSRI-LIRVN-----------------SKSL-PTFALNDILIAHPCPAMVSRFSFKIKSDGMPCSPLVNCRSSGLRVS 213 (312)
Q Consensus 153 ~~~~rl-~~~~~-----------------g~~~-~~~ALNDv~I~~~~~~~~~~~~~~v~~~~~~~~~~~~~~gDGviVs 213 (312)
+++..+ .+.++ |+.. ...|||++.-. +..++++.+ |++ .+++|+++|+
T Consensus 151 ~~r~fl~~~~~G~~a~v~~~~~~~~k~~~G~~~Y~~~~l~~l~~~-----~~~~~~i~~--dg~------~~~~~~~~v~ 217 (337)
T 2qv7_A 151 NNRYFINLAAGGQLTQVSYETPSKLKSIVGPFAYYIKGFEMLPQM-----KAVDLRIEY--DGN------VFQGEALLFF 217 (337)
T ss_dssp TTEEESSEEEEECBCC-------------CGGGSCCCTTTTGGGB-----CCEEEEEEE--TTE------EEEEEEEEEE
T ss_pred CCEEEEEEeeecccHHHHHHhhHHHHhccChHHHHHHHHHHHHhC-----CCccEEEEE--CCE------EEEeeEEEEE
Confidence 332111 22211 2110 12367776532 233455555 553 3689999999
Q ss_pred ecccchHHHHhcCCeeeccccc-------chhhhhhccCCccchh-hhhhhccccCC----c--------eeeEEEeeec
Q 021432 214 TAAGSSAAMLSAGGFIMPILSH-------DLQYMVREPISPAAAT-SSLIHGLVKSD----Q--------SMEAMWFCKE 273 (312)
Q Consensus 214 TptGSTAY~lSAGG~v~Pi~~p-------~l~~~v~tPi~p~~l~-~~~~~~vv~~~----~--------~i~i~~~~~~ 273 (312)
|++||| ++|| |++.| .+++++++|++|+.+. .++. ++... . +++|+. ..+
T Consensus 218 v~n~~~----~gGg---~~i~P~a~~~DG~ldv~~v~~~~~~~l~~~~~~--v~~g~~~~~~~v~~~~~~~i~i~~-~~~ 287 (337)
T 2qv7_A 218 LGLTNS----MAGF---EKLVPDAKLDDGYFTLIIVEKSNLAELGHIMTL--ASRGEHTKHPKVIYEKAKAINISS-FTD 287 (337)
T ss_dssp EESSCC----CSSC---SCSSTTCCSSSSCEEEEEEECCCHHHHHHHHHH--HTTTCGGGSTTEEEEEESEEEEEC-SSC
T ss_pred EECCCC----CCCC---CccCCCCcCCCCeEEEEEEccCCHHHHHHHHHH--HhcCCccCCCCEEEEEeeEEEEEE-CCC
Confidence 999997 7899 77777 6999999999999763 3332 33311 2 234432 235
Q ss_pred ceEEEcCcceEEEeecCCeEEEccCCCeeeeecCCC
Q 021432 274 GFVYIDGSHVFVSIQNGDVIEISSKAPALKVFLPPN 309 (312)
Q Consensus 274 ~~l~iDG~~~~~~l~~gd~v~I~~s~~~~~l~~~~~ 309 (312)
..+.+||+ ... .+.++|+..+..++++.|++
T Consensus 288 ~~~~iDGE-~~~----~~~i~i~v~p~~l~v~~p~~ 318 (337)
T 2qv7_A 288 LQLNVDGE-YGG----KLPANFLNLERHIDVFAPND 318 (337)
T ss_dssp CEEEETTE-EEE----ESCEEEEEEEEEEEEECCTT
T ss_pred CeEEECCC-cCC----CCcEEEEEEcCeEEEEecCc
Confidence 67899997 322 46799999999999998864
No 9
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=99.59 E-value=6.6e-16 Score=146.12 Aligned_cols=197 Identities=16% Similarity=0.205 Sum_probs=122.7
Q ss_pred ccccEEEEEcCCcceEeeccc-C----CCCcceeeccCCCCchhHHhhhhhccccccccc-cchHHh-hhcHHHHHHHHh
Q 021432 74 RNVDLVVTVGGDGTLLQAGHL-I----DDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKG-YLCAAT-VNNFEQLLDNIL 146 (312)
Q Consensus 74 ~~~Dlvi~lGGDGT~L~a~~~-~----~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~G-fL~~~~-~~~~~~~l~~l~ 146 (312)
+++|+||++|||||++.+++. . +.++|+..|+.| +.| |..++. +.+++++++.++
T Consensus 81 ~~~d~vvv~GGDGTl~~v~~~l~~~~~~~~~plgiiP~G------------------t~N~fa~~l~i~~~~~~al~~i~ 142 (332)
T 2bon_A 81 FGVATVIAGGGDGTINEVSTALIQCEGDDIPALGILPLG------------------TANDFATSVGIPEALDKALKLAI 142 (332)
T ss_dssp HTCSEEEEEESHHHHHHHHHHHHHCCSSCCCEEEEEECS------------------SSCHHHHHTTCCSSHHHHHHHHH
T ss_pred cCCCEEEEEccchHHHHHHHHHhhcccCCCCeEEEecCc------------------CHHHHHHhcCCCCCHHHHHHHHH
Confidence 357999999999999999864 3 457898888898 455 444555 678999999999
Q ss_pred cCcc------ccCcc-ceEE-EE------ec---Cccc-C-----cccccchhhhcCCccccceeEEEEecCCCCCCCCc
Q 021432 147 EGKT------VPSNL-SRIL-IR------VN---SKSL-P-----TFALNDILIAHPCPAMVSRFSFKIKSDGMPCSPLV 203 (312)
Q Consensus 147 ~g~~------~~~~~-~rl~-~~------~~---g~~~-~-----~~ALNDv~I~~~~~~~~~~~~~~v~~~~~~~~~~~ 203 (312)
+|++ .++.+ ..+. +. +. .+.. . .|++|-+ ..-...+. +.+.+..|++
T Consensus 143 ~g~~~~iDlg~v~~r~~fl~~~~~G~da~v~~~~~~~~k~~~G~~~Y~~~~l--~~l~~~~~--~~~~i~~dg~------ 212 (332)
T 2bon_A 143 AGDAIAIDMAQVNKQTCFINMATGGFGTRITTETPEKLKAALGSVSYIIHGL--MRMDTLQP--DRCEIRGENF------ 212 (332)
T ss_dssp HSEEEEEEEEEETTSCEESSEEEEEEEEEC----------CCHHHHHHHHHT--SCEEEEEC--EEEEEEETTE------
T ss_pred cCCeEEeeEEEECCceEEEEEEeECccHHHHHHhhHHhHhcccHHHHHHHHH--HHHhhCCC--eeEEEEECCE------
Confidence 9998 34333 2111 00 00 0000 0 2344421 11111122 3344444553
Q ss_pred ccccCCeeeeecccchHHHHhcCCeeeccccc-------chhhhhhccCCccchhhhh--hhc------cccCCceeeEE
Q 021432 204 NCRSSGLRVSTAAGSSAAMLSAGGFIMPILSH-------DLQYMVREPISPAAATSSL--IHG------LVKSDQSMEAM 268 (312)
Q Consensus 204 ~~~gDGviVsTptGSTAY~lSAGG~v~Pi~~p-------~l~~~v~tPi~p~~l~~~~--~~~------vv~~~~~i~i~ 268 (312)
.+++|+++|+++.++ | ++|| +.+.| .+++++++|+ ++.+...+ ..+ ......+++|+
T Consensus 213 ~~~~~~~~v~v~N~~--~--~ggg---~~i~P~a~~~DG~Ldv~iv~~~-~~~l~~~~~~~~g~~~~~v~~~~~~~i~I~ 284 (332)
T 2bon_A 213 HWQGDALVIGIGNGR--Q--AGGG---QQLCPNALINDGLLQLRIFTGD-EILPALVSTLKSDEDNPNIIEGASSWFDIQ 284 (332)
T ss_dssp EEEEEESEEEEESSS--C--BTTT---BCSCTTCCTTSSCEEEEEECCS-SCCHHHHHHHHTTCCCTTEEEEEESEEEEE
T ss_pred EEEEEEEEEEEECCC--c--cCCC---cccCCCCCCCCCeEEEEEECCH-HHHHHHHHHHHcCCCCCcEEEEEeeEEEEE
Confidence 357899999996666 3 7888 66677 6899999999 87433211 111 11123455555
Q ss_pred EeeecceEEEcCcceEEEeecCCeEEEccCCCeeeeecCCCCCC
Q 021432 269 WFCKEGFVYIDGSHVFVSIQNGDVIEISSKAPALKVFLPPNLVY 312 (312)
Q Consensus 269 ~~~~~~~l~iDG~~~~~~l~~gd~v~I~~s~~~~~l~~~~~~~~ 312 (312)
. .++..+.+||+. .. ++.++|+..+..++++.|++.+|
T Consensus 285 ~-~~~~~~~iDGE~--~~---~~~~~i~v~p~al~vl~p~~~~~ 322 (332)
T 2bon_A 285 A-PHDITFNLDGEP--LS---GQNFHIEILPAALRCRLPPDCPL 322 (332)
T ss_dssp E-EEEEEEEETTEE--EE---EEEEEEEEEEEEEEEEECTTCTT
T ss_pred E-CCCCeEEecCCC--CC---CceEEEEEECCeeEEEeCCCccc
Confidence 3 345678999963 22 46799999999999999987764
No 10
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=98.09 E-value=4.8e-07 Score=84.09 Aligned_cols=111 Identities=16% Similarity=0.162 Sum_probs=70.3
Q ss_pred cccccccccccC-CCcccccchhHHHhhhhhhhhhhh----hHHHHHHhhhcCCcceeecccccCCCccccccEEEEEcC
Q 021432 10 LKPFDVYTVRQS-NGISHITNPLILQHLENRCKVHKD----AINFCQDILSKKPIEWEPVFRNNLSRPIRNVDLVVTVGG 84 (312)
Q Consensus 10 ~k~~~i~~n~~~-~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~Dlvi~lGG 84 (312)
||++.++.|..+ +..+.....++.++|+.++..+.- ......++.+ +..+++|+||++||
T Consensus 8 m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~~~a~~~~~---------------~~~~~~d~vv~~GG 72 (304)
T 3s40_A 8 FEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQGDATKYCQ---------------EFASKVDLIIVFGG 72 (304)
T ss_dssp CSSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCSTTHHHHHHH---------------HHTTTCSEEEEEEC
T ss_pred CCEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccCcchHHHHHH---------------HhhcCCCEEEEEcc
Confidence 678888888875 333344556677777776642110 0000111100 01136899999999
Q ss_pred CcceEeeccc-CC--CCcceeeccCCCCchhHHhhhhhccccccccccchHHhhhcHHHHHHHHhcCccc
Q 021432 85 DGTLLQAGHL-ID--DSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAATVNNFEQLLDNILEGKTV 151 (312)
Q Consensus 85 DGT~L~a~~~-~~--~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~~~~~~~~~l~~l~~g~~~ 151 (312)
|||+..++.. .. .++|+..|..|. .|.|+ |.+|. +.+++++++.+++|+..
T Consensus 73 DGTl~~v~~~l~~~~~~~~l~iiP~Gt---------~N~~a--r~lg~-----~~~~~~a~~~i~~g~~~ 126 (304)
T 3s40_A 73 DGTVFECTNGLAPLEIRPTLAIIPGGT---------CNDFS--RTLGV-----PQNIAEAAKLITKEHVK 126 (304)
T ss_dssp HHHHHHHHHHHTTCSSCCEEEEEECSS---------CCHHH--HHTTC-----CSSHHHHHHHHTTCCEE
T ss_pred chHHHHHHHHHhhCCCCCcEEEecCCc---------HHHHH--HHcCC-----CccHHHHHHHHHhCCeE
Confidence 9999998753 33 468888899884 35555 35554 56788999999998753
No 11
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=87.79 E-value=0.061 Score=50.27 Aligned_cols=85 Identities=21% Similarity=0.437 Sum_probs=50.7
Q ss_pred cccEEEEEcCCcceEeecccCCCCcceeeccCCCCchhHHhhhhhcccc-ccccccchHHhhhcHHHHHHHHhcCccccC
Q 021432 75 NVDLVVTVGGDGTLLQAGHLIDDSIPVLGVNSDPTRGEEVDMLSNEFDA-SRSKGYLCAATVNNFEQLLDNILEGKTVPS 153 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~~~~~~~~PilGIN~G~~~~~~~~~~~~~~~~-~~~~GfL~~~~~~~~~~~l~~l~~g~~~~~ 153 (312)
+.|.+|++|||||+-.|.++.+.++|++||- ++-+ |.+.- ..+.||-+.++ .+-++++++..-. .-.
T Consensus 94 ~Id~LvvIGGdgS~~~a~~L~~~~i~vvgiP-kTID--------NDl~~td~t~GfdTA~~--~~~~aid~i~~ta-~s~ 161 (320)
T 1pfk_A 94 GIDALVVIGGDGSYMGAMRLTEMGFPCIGLP-GTID--------NDIKGTDYTIGFFTALS--TVVEAIDRLRDTS-SSH 161 (320)
T ss_dssp TCCEEEEEECHHHHHHHHHHHHTTCCEEEEE-BCTT--------CCCTTCSCCBTHHHHHH--HHHHHHHHHHHHH-HHH
T ss_pred CCCEEEEECCCchHHHHHHHHhhCCCEEEEe-cccc--------CCCCCCcCCCCHHHHHH--HHHHHHHHHHHHH-hcC
Confidence 5789999999999988877766689999993 2111 11111 14899988865 2344555543211 111
Q ss_pred ccceEE-EEecCcccCccccc
Q 021432 154 NLSRIL-IRVNSKSLPTFALN 173 (312)
Q Consensus 154 ~~~rl~-~~~~g~~~~~~ALN 173 (312)
.|+. +.+-|+..-+.||.
T Consensus 162 --~rv~iVEvMGR~aG~lAl~ 180 (320)
T 1pfk_A 162 --QRISVVEVMGRYCGDLTLA 180 (320)
T ss_dssp --TCEEEEEECCTTCCHHHHH
T ss_pred --CCEEEEEeCCcCHHHHHHH
Confidence 2332 45556554455554
No 12
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp}
Probab=87.58 E-value=0.063 Score=50.11 Aligned_cols=85 Identities=22% Similarity=0.399 Sum_probs=50.4
Q ss_pred cccEEEEEcCCcceEeecccCCCCcceeeccCCCCchhHHhhhhhcccc-ccccccchHHhhhcHHHHHHHHhcCccccC
Q 021432 75 NVDLVVTVGGDGTLLQAGHLIDDSIPVLGVNSDPTRGEEVDMLSNEFDA-SRSKGYLCAATVNNFEQLLDNILEGKTVPS 153 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~~~~~~~~PilGIN~G~~~~~~~~~~~~~~~~-~~~~GfL~~~~~~~~~~~l~~l~~g~~~~~ 153 (312)
+.|.+|++|||||+-.|.++.+.++|++||- ++ +-|.+.- ..+.||-+.++ .+-++++++..-. .-.
T Consensus 93 ~Id~LvvIGGdgS~~~a~~L~~~~i~vvgiP-kT--------IDNDl~~td~t~GfdTA~~--~~~~aid~i~~ta-~s~ 160 (319)
T 1zxx_A 93 GIDAVVVIGGDGSYHGALQLTRHGFNSIGLP-GT--------IDNDIPYTDATIGYDTACM--TAMDAIDKIRDTA-SSH 160 (319)
T ss_dssp TCCEEEEEECHHHHHHHHHHHHTTCCEEEEE-EE--------TTCCCTTCSCCEEHHHHHH--HHHHHHHHHHHHH-HHT
T ss_pred CCCEEEEECCchHHHHHHHHHHhCCCEEEEe-ec--------ccCCCCCCcCCCCHHHHHH--HHHHHHHHHHHHH-hcC
Confidence 5789999999999988877766689999983 11 1111111 14899988865 2344555553211 112
Q ss_pred ccceEE-EEecCcccCccccc
Q 021432 154 NLSRIL-IRVNSKSLPTFALN 173 (312)
Q Consensus 154 ~~~rl~-~~~~g~~~~~~ALN 173 (312)
+ |+. +.+-|+..-+.||.
T Consensus 161 ~--rv~iVEvMGR~aG~lAl~ 179 (319)
T 1zxx_A 161 H--RVFIVNVMGRNCGDIAMR 179 (319)
T ss_dssp T--CEEEEEECCTTCCHHHHH
T ss_pred C--CEEEEEeCCCCHHHHHHH
Confidence 2 332 45556554455554
No 13
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A*
Probab=86.41 E-value=0.11 Score=48.42 Aligned_cols=85 Identities=25% Similarity=0.425 Sum_probs=50.2
Q ss_pred cccEEEEEcCCcceEeecccCCCCcceeeccCCCCchhHHhhhhhcccc-ccccccchHHhhhcHHHHHHHHhcCccccC
Q 021432 75 NVDLVVTVGGDGTLLQAGHLIDDSIPVLGVNSDPTRGEEVDMLSNEFDA-SRSKGYLCAATVNNFEQLLDNILEGKTVPS 153 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~~~~~~~~PilGIN~G~~~~~~~~~~~~~~~~-~~~~GfL~~~~~~~~~~~l~~l~~g~~~~~ 153 (312)
+.|.+|++|||||+-.|.++.+..+|++||- .+ +-|.+.- ..+.||-+.++ .+.++++++..-.. .
T Consensus 93 ~Id~L~~IGGdgS~~~a~~l~~~~i~vigiP-kT--------IDNDl~~td~t~GfdTA~~--~~~~ai~~i~~~a~-s- 159 (319)
T 4a3s_A 93 GIEGLVVIGGDGSYMGAKKLTEHGFPCVGVP-GT--------IDNDIPGTDFTIGFDTALN--TVIDAIDKIRDTAT-S- 159 (319)
T ss_dssp TCCEEEEEECTTHHHHHHHHHHTTCCEEEEE-EE--------TTCCCTTCSCCEEHHHHHH--HHHHHHHHHHHHHH-H-
T ss_pred CCCEEEEeCCcHHHHHHHHHhccCCcEEEee-cc--------ccCCCCCCCCCCCHHHHHH--HHHHHHHHHHhhhh-c-
Confidence 5789999999999987766666689999993 11 1111111 24799988865 34455666543221 1
Q ss_pred ccceE-EEEecCcccCccccc
Q 021432 154 NLSRI-LIRVNSKSLPTFALN 173 (312)
Q Consensus 154 ~~~rl-~~~~~g~~~~~~ALN 173 (312)
..|+ -+.+-|+..-+.|+.
T Consensus 160 -~~rv~ivEvMGR~aG~lA~~ 179 (319)
T 4a3s_A 160 -HERTYVIEVMGRHAGDIALW 179 (319)
T ss_dssp -HTCEEEEEECCTTCCHHHHH
T ss_pred -cCCeEEEEeCCcchhHHHHH
Confidence 2233 245556654444443
No 14
>2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A*
Probab=77.66 E-value=0.22 Score=49.88 Aligned_cols=60 Identities=25% Similarity=0.514 Sum_probs=39.6
Q ss_pred cccEEEEEcCCcceEeecccCC------CCcceeeccCCCCchhHHhhhhhcccc---ccccccchHHhhhcHHHHHHHH
Q 021432 75 NVDLVVTVGGDGTLLQAGHLID------DSIPVLGVNSDPTRGEEVDMLSNEFDA---SRSKGYLCAATVNNFEQLLDNI 145 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~~~~~------~~~PilGIN~G~~~~~~~~~~~~~~~~---~~~~GfL~~~~~~~~~~~l~~l 145 (312)
+.|.+|+||||||+-.|.++.+ .++|++||-- ++-|.+.- ..+.||-+.+. .+-++++++
T Consensus 166 ~Id~LvvIGGdgS~~~A~~L~e~~~~~~~~i~vIGiPk---------TIDNDl~~t~id~tiGFdTA~~--~~~~aId~i 234 (555)
T 2f48_A 166 NLNAIIIIGGDDSNTNAAILAEYFKKNGENIQVIGVPK---------TIDADLRNDHIEISFGFDSATK--IYSELIGNL 234 (555)
T ss_dssp TCSEEEEEESHHHHHHHHHHHHHHHHTTCCCEEEEEEE---------ETTCCCCCSSCCCCEEHHHHHH--HHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHHHhCCCCcEEEecc---------ccCCCCCCCcCCCCCChhHHHH--HHHHHHHHH
Confidence 6799999999999988865432 3799999932 12222210 14799988865 344555555
No 15
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A
Probab=76.92 E-value=0.28 Score=47.44 Aligned_cols=51 Identities=14% Similarity=0.199 Sum_probs=34.6
Q ss_pred cccEEEEEcCCcceEeecccCC------CCcceeeccCCCCchhHHhhhhhcccc-ccccccchHHh
Q 021432 75 NVDLVVTVGGDGTLLQAGHLID------DSIPVLGVNSDPTRGEEVDMLSNEFDA-SRSKGYLCAAT 134 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~~~~~------~~~PilGIN~G~~~~~~~~~~~~~~~~-~~~~GfL~~~~ 134 (312)
+.|.+|+||||||+-.|.++.+ .++|++||- ++- -|.+.. ..+.||-+.+.
T Consensus 104 ~Id~Lv~IGGdgS~~~A~~L~~~~~~~g~~i~vIGiP-kTI--------DNDl~~tD~t~GFdTA~~ 161 (419)
T 3hno_A 104 DIGYFFYNGGGDSADTCLKVSQLSGTLGYPIQAIHVP-KTV--------DNDLPITDCCPGFGSVAK 161 (419)
T ss_dssp TEEEEEEEESHHHHHHHHHHHHHHHHTTCCCEEEEEE-CCT--------TCCCSSSSSCTTHHHHHH
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHHHhCCCccEEEec-ccc--------cCCCcCCCCCCCchHHHH
Confidence 6799999999999988765432 359999993 211 122211 24799988765
No 16
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A*
Probab=76.02 E-value=0.25 Score=48.61 Aligned_cols=62 Identities=29% Similarity=0.396 Sum_probs=40.2
Q ss_pred cccEEEEEcCCcceEeecccC------CCCcceeeccCCCCchhHHhhhhhcccc-ccccccchHHhhhcHHHHHHHHhc
Q 021432 75 NVDLVVTVGGDGTLLQAGHLI------DDSIPVLGVNSDPTRGEEVDMLSNEFDA-SRSKGYLCAATVNNFEQLLDNILE 147 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~~~~------~~~~PilGIN~G~~~~~~~~~~~~~~~~-~~~~GfL~~~~~~~~~~~l~~l~~ 147 (312)
+.|.+|+||||||+-.|.++. +.++|++||-- +- -|.+.. ..++||-+.++ .+-++++++..
T Consensus 189 ~Id~LvvIGGdgS~~~A~~L~e~~~~~g~~i~vVGIPk-TI--------DNDl~gTD~T~GFdTAv~--~~~eaId~i~~ 257 (487)
T 2hig_A 189 GVNILFTVGGDGTQRGALVISQEAKRRGVDISVFGVPK-TI--------DNDLSFSHRTFGFQTAVE--KAVQAIRAAYA 257 (487)
T ss_dssp TCSEEEEEECHHHHHHHHHHHHHHHHHTCCCEEEEEEC-CT--------TSSCCCSSCCTTHHHHHH--HHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHHHhCCCceEEeccc-cc--------cCCCCCCCCCCCHHHHHH--HHHHHHHHHHH
Confidence 679999999999998776543 23689999942 11 122211 24899988865 34455666543
No 17
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans}
Probab=74.21 E-value=0.78 Score=40.25 Aligned_cols=36 Identities=17% Similarity=0.264 Sum_probs=25.7
Q ss_pred ccccccEEEEEcCCcceE---------------eeccc-CCCCcceeeccCC
Q 021432 72 PIRNVDLVVTVGGDGTLL---------------QAGHL-IDDSIPVLGVNSD 107 (312)
Q Consensus 72 ~~~~~Dlvi~lGGDGT~L---------------~a~~~-~~~~~PilGIN~G 107 (312)
...++|.+|+-||-++.- ...+. +..++|+|||-.|
T Consensus 42 ~~~~~d~lii~GGp~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~PvLGIClG 93 (236)
T 3l7n_A 42 DIDDFDMLILMGGPQSPSSTKKEFPYYDAQAEVKLIQKAAKSEKIIVGVCLG 93 (236)
T ss_dssp CGGGCSEEEECCCSSCTTCCTTTCTTCCHHHHHHHHHHHHHTTCEEEEETHH
T ss_pred CccccCEEEECCCCCCcccccccCcccchHHHHHHHHHHHHcCCCEEEEchH
Confidence 367899999999998831 11111 3457999999877
No 18
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A*
Probab=72.13 E-value=1.5 Score=45.33 Aligned_cols=86 Identities=20% Similarity=0.180 Sum_probs=52.1
Q ss_pred cccEEEEEcCCcceEeecccC------C-CCcceeeccCCCCchhHHhhhhhcccc-ccccccchHHhhhcHHHHHHHHh
Q 021432 75 NVDLVVTVGGDGTLLQAGHLI------D-DSIPVLGVNSDPTRGEEVDMLSNEFDA-SRSKGYLCAATVNNFEQLLDNIL 146 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~~~~------~-~~~PilGIN~G~~~~~~~~~~~~~~~~-~~~~GfL~~~~~~~~~~~l~~l~ 146 (312)
+.|.+|++|||||+-.|.++. + .++|++||- ++-+ |.+.. ..++||-+.++ .+-++++++.
T Consensus 489 ~Id~LvvIGGdgS~~~a~~L~~~~~~~~~~~i~vvgiP-kTID--------NDl~gTD~TiGfdTA~~--~~~~aid~i~ 557 (762)
T 3o8l_A 489 NIQGLVIIGGFEAYTGGLELMEGRKQFDELCIPFVVIP-ATVS--------NNVPGSDFSVGADTALN--TICTTCDRIK 557 (762)
T ss_dssp TCCCEEEEESHHHHHHHHHHHHHHHHCSTTCSCEEEEE-BCTT--------CCCTTCSCCBTHHHHHH--HHHHHHHHHT
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHHhccccCCCEEeec-cccC--------CCCCCCcCCCChHHHHH--HHHHHHHHHH
Confidence 679999999999998875442 2 369999993 2111 11111 24799988865 4556777775
Q ss_pred cCccccCccceEE-EEecCcccCccccc
Q 021432 147 EGKTVPSNLSRIL-IRVNSKSLPTFALN 173 (312)
Q Consensus 147 ~g~~~~~~~~rl~-~~~~g~~~~~~ALN 173 (312)
.--. ..+.|+. +.+-|+..-+.||.
T Consensus 558 ~tA~--ssh~rv~vVEvMGR~aG~lAl~ 583 (762)
T 3o8l_A 558 QSAA--GTKRRVFIIETMGGYCGYLATM 583 (762)
T ss_dssp TTTC--SSSCEEEEEEECSTTCCHHHHH
T ss_pred HHHH--hCCCcEEEEEeCCcchhHHHHH
Confidence 4321 1233543 45666654455664
No 19
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A*
Probab=71.36 E-value=1.6 Score=45.14 Aligned_cols=84 Identities=20% Similarity=0.336 Sum_probs=49.2
Q ss_pred cccEEEEEcCCcceEeecccC-----------------------CCCcceeeccCCCCchhHHhhhhhcccc-ccccccc
Q 021432 75 NVDLVVTVGGDGTLLQAGHLI-----------------------DDSIPVLGVNSDPTRGEEVDMLSNEFDA-SRSKGYL 130 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~~~~-----------------------~~~~PilGIN~G~~~~~~~~~~~~~~~~-~~~~GfL 130 (312)
+.|.+|++|||||+-.|..+. ..++|++||- +.-+ |.+.. ..+.||-
T Consensus 109 ~Id~LvvIGGdgS~~gA~~l~~e~~~ll~eL~~~g~i~~~~~~~~~~i~vVGIP-kTID--------NDl~gTD~TiGfd 179 (762)
T 3o8l_A 109 GITNLCVIGGDGSLTGADTFRSEWSDLLSDLQKAGKITAEEATRSSYLNIVGLV-GSID--------NDFCGTDMTIGTD 179 (762)
T ss_dssp CCCEEEEEECHHHHHHHHHHHHTTHHHHHHTTTTTSCTTTGGGSTTCCEEEEEE-BCTT--------CCCSSCSCCBTHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHhHHHHHHHHhccchhHHHHhcCCCCCeEEee-cCcc--------cCCCCCcCCcCch
Confidence 679999999999987765220 1368999983 3221 22211 2379998
Q ss_pred hHHhhhcHHHHHHHHhcCccccCccceEE-EEecCcccCcccc
Q 021432 131 CAATVNNFEQLLDNILEGKTVPSNLSRIL-IRVNSKSLPTFAL 172 (312)
Q Consensus 131 ~~~~~~~~~~~l~~l~~g~~~~~~~~rl~-~~~~g~~~~~~AL 172 (312)
+.++ .+-++++++..--.. ..|+. +.+-|+..-+.||
T Consensus 180 TA~~--~i~eaid~i~~tA~S---h~Rv~iVEvMGR~aG~LAl 217 (762)
T 3o8l_A 180 SALH--RITEIVDAITTTAQS---HQRTFVLEVMGRHCGYLAL 217 (762)
T ss_dssp HHHH--HHHHHHHHHHTTCCS---SCCEEEEEECCSSCCHHHH
T ss_pred hHHH--HHHHHHHHHHHhhhc---CccEEEEEeCCcchhHHHH
Confidence 8865 356777777643322 23433 4555554333343
No 20
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=68.27 E-value=1.3 Score=38.26 Aligned_cols=35 Identities=23% Similarity=0.319 Sum_probs=25.5
Q ss_pred cccccEEEEEcC-CcceEee--c----cc-CCCCcceeeccCC
Q 021432 73 IRNVDLVVTVGG-DGTLLQA--G----HL-IDDSIPVLGVNSD 107 (312)
Q Consensus 73 ~~~~Dlvi~lGG-DGT~L~a--~----~~-~~~~~PilGIN~G 107 (312)
+.++|.+|.-|| .|++-.. . +. ...++|+|||-.|
T Consensus 52 l~~~DglIl~GG~p~~~~~~~~~~~l~~~~~~~~~PiLGIC~G 94 (212)
T 2a9v_A 52 LDGLDGLVLSGGAPNIDEELDKLGSVGKYIDDHNYPILGICVG 94 (212)
T ss_dssp GTTCSEEEEEEECSCGGGTGGGHHHHHHHHHHCCSCEEEETHH
T ss_pred HhCCCEEEECCCCCCCCcccccchhHHHHHHhCCCCEEEEChH
Confidence 456999999999 7887543 1 11 2357999999877
No 21
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=66.49 E-value=1.7 Score=46.12 Aligned_cols=85 Identities=21% Similarity=0.351 Sum_probs=48.9
Q ss_pred cccEEEEEcCCcceEeeccc----------C-------------CCCcceeeccCCCCchhHHhhhhhcccc-ccccccc
Q 021432 75 NVDLVVTVGGDGTLLQAGHL----------I-------------DDSIPVLGVNSDPTRGEEVDMLSNEFDA-SRSKGYL 130 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~~~----------~-------------~~~~PilGIN~G~~~~~~~~~~~~~~~~-~~~~GfL 130 (312)
+.|.+|+||||||+-.|.++ + ..++|++||- +.- -|.+.. ..+.||-
T Consensus 304 gId~LvvIGGDGS~~gA~~L~~e~~~l~~eL~~~gkls~~~~~~~~~i~VVGIP-kTI--------DNDl~gTD~TiGFd 374 (989)
T 3opy_A 304 GIDALVVCGGDGSLTGADLFRKEWPELIKELLGEDKITKEQYETHRNLTIVGLV-GSI--------DNDMCGTDSTIGAY 374 (989)
T ss_dssp TCCEEEEEECHHHHHHHHHHHHHTTCCCCC--------CHHHHHTTSCEEEEEE-EES--------SCCCTTCSCCEEHH
T ss_pred CCCEEEEeCCChhhHHHHHHHHHhhHHHHHHHHccccchhhhhccCCCcEEEEe-ecc--------cCCCCCCCCCCChh
Confidence 67999999999998766431 0 1368999983 211 111111 2379998
Q ss_pred hHHhhhcHHHHHHHHhcCccccCccceEE-EEecCcccCccccc
Q 021432 131 CAATVNNFEQLLDNILEGKTVPSNLSRIL-IRVNSKSLPTFALN 173 (312)
Q Consensus 131 ~~~~~~~~~~~l~~l~~g~~~~~~~~rl~-~~~~g~~~~~~ALN 173 (312)
+.++ .+-++++++..--.. ..|+. +.+-|+..-+.||.
T Consensus 375 TAl~--~i~eaId~I~~TA~S---h~RvfVVEVMGR~aG~LAl~ 413 (989)
T 3opy_A 375 SSLE--RIIELVDYIDATAAS---HSRAFVVEVMGRHCGWLGLM 413 (989)
T ss_dssp HHHH--HHHHHHHHHHSSCCC---TTEEEEEECCCSSCTHHHHH
T ss_pred hHHH--HHHHHHHHHHhhhhc---cCceEEEEcCCCchhHHHHH
Confidence 8865 344666776654332 33443 45556543344443
No 22
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=61.44 E-value=2.4 Score=44.85 Aligned_cols=85 Identities=19% Similarity=0.350 Sum_probs=49.4
Q ss_pred cccEEEEEcCCcceEeeccc-----------C------------CCCcceeeccCCCCchhHHhhhhhcccc-ccccccc
Q 021432 75 NVDLVVTVGGDGTLLQAGHL-----------I------------DDSIPVLGVNSDPTRGEEVDMLSNEFDA-SRSKGYL 130 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~~~-----------~------------~~~~PilGIN~G~~~~~~~~~~~~~~~~-~~~~GfL 130 (312)
+.|.+|+||||||+-.|.++ . ..++|++||- +.- -|.+.- ..+.||-
T Consensus 276 gId~LvvIGGDGS~~gA~~l~~e~~~l~~eL~~~gkis~e~~~~~~~i~VVGIP-kTI--------DNDl~gTD~TiGfd 346 (941)
T 3opy_B 276 GIDALIVCGGDGSLTGADRFRSEWPSLIEELLQTEQISQQQFNTHQNLNICGAV-GSI--------DNDMSSTDATIGAF 346 (941)
T ss_dssp TCCEEEEEECHHHHHHHHHHHHTCCCCCCC--------CHHHHHTCSCEEEEEE-EES--------SCCCSSCSSCEEHH
T ss_pred CCCEEEEeCCChhHHHHHHHHHhhhHHHHHHHhhccccHHHHhcCCCCcEEEEe-ecc--------cCCCCCCCCCCChH
Confidence 67999999999999876421 0 1368999983 211 111111 2379998
Q ss_pred hHHhhhcHHHHHHHHhcCccccCccceEE-EEecCcccCccccc
Q 021432 131 CAATVNNFEQLLDNILEGKTVPSNLSRIL-IRVNSKSLPTFALN 173 (312)
Q Consensus 131 ~~~~~~~~~~~l~~l~~g~~~~~~~~rl~-~~~~g~~~~~~ALN 173 (312)
+.++ .+-++++++..--. ...|+. +.+-|+..-+.||.
T Consensus 347 TAv~--~i~eaId~I~~tA~---Sh~RvfvVEVMGR~aG~LAl~ 385 (941)
T 3opy_B 347 SSLD--RICRAIDYIDATAN---SHSRAFIVEVMGRHCGWLGLL 385 (941)
T ss_dssp HHHH--HHHHHHHHHHSCC----CCSEEEEEECCCSSCCHHHHH
T ss_pred HHHH--HHHHHHHHHHhhhh---ccCceEEEEcCCCcccHHHHH
Confidence 8865 35567777754332 234543 45556544445554
No 23
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=61.21 E-value=1.1 Score=46.57 Aligned_cols=86 Identities=19% Similarity=0.166 Sum_probs=50.0
Q ss_pred cccEEEEEcCCcceEeecccCC-------CCcceeeccCCCCchhHHhhhhhcccc-ccccccchHHhhhcHHHHHHHHh
Q 021432 75 NVDLVVTVGGDGTLLQAGHLID-------DSIPVLGVNSDPTRGEEVDMLSNEFDA-SRSKGYLCAATVNNFEQLLDNIL 146 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~~~~~-------~~~PilGIN~G~~~~~~~~~~~~~~~~-~~~~GfL~~~~~~~~~~~l~~l~ 146 (312)
+.|.+|+||||||+-.+.++.. .++|++||- ++- -|.+.. ..++||-+.++ .+-++++++.
T Consensus 484 ~Id~LvvIGGdgS~~~a~~L~~~~~~~~~~~i~vvgiP-kTI--------DNDl~gTD~T~GfdTA~~--~~~~aid~i~ 552 (766)
T 3o8o_B 484 EFDGLIIVGGFEAFESLHQLERARESYPAFRIPMVLIP-ATL--------SNNVPGTEYSLGSDTALN--ALMEYCDVVK 552 (766)
T ss_dssp TCSEEEEEESHHHHHHHHHHHTTTTTCGGGCSCCCEEE-BCT--------TCCCSSCSCCBTHHHHHH--HHHHHHHHHH
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHHhcCccCCcEEeec-ccc--------ccCCCCCCCCCChhHHHH--HHHHHHHHHH
Confidence 6799999999999877654421 258999983 211 121111 23799988875 3445666664
Q ss_pred cCccccCccceEE-EEecCcccCccccc
Q 021432 147 EGKTVPSNLSRIL-IRVNSKSLPTFALN 173 (312)
Q Consensus 147 ~g~~~~~~~~rl~-~~~~g~~~~~~ALN 173 (312)
.-. ...+.|+. +.+-|+..-+.||.
T Consensus 553 ~ta--~ss~~rv~iVEvMGR~aG~lAl~ 578 (766)
T 3o8o_B 553 QSA--SSTRGRAFVVDCQGGNSGYLATY 578 (766)
T ss_dssp HHH--HHHSSEEEEEEECCTTCCHHHHH
T ss_pred HHh--hccCCcEEEEEeCCCchhHHHHH
Confidence 311 11122443 45566654455664
No 24
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=60.56 E-value=1 Score=47.60 Aligned_cols=86 Identities=19% Similarity=0.234 Sum_probs=49.4
Q ss_pred cccEEEEEcCCcceEeecccCC-------CCcceeeccCCCCchhHHhhhhhcccc-ccccccchHHhhhcHHHHHHHHh
Q 021432 75 NVDLVVTVGGDGTLLQAGHLID-------DSIPVLGVNSDPTRGEEVDMLSNEFDA-SRSKGYLCAATVNNFEQLLDNIL 146 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~~~~~-------~~~PilGIN~G~~~~~~~~~~~~~~~~-~~~~GfL~~~~~~~~~~~l~~l~ 146 (312)
+.|.+|+||||||+-.+.++.. .++|++||- +.-+ |.+.. ..++||-+.++ .+-++++++.
T Consensus 662 ~Id~LvvIGGdgS~~~a~~L~~~~~~~~~~~i~vVGIP-kTID--------NDl~gTD~TiGfdTA~~--~i~eaid~i~ 730 (941)
T 3opy_B 662 GFDGLILVGGFEAFISLHQLERARINYPSLRIPLVLIP-ATIS--------NNVPGTEYSLGSDTCLN--SFMEYCDVIK 730 (941)
T ss_dssp TCSEEEEEESHHHHHHHHHHHHGGGTCGGGCSCEEEEE-BCSS--------CCCTTCSCCBTHHHHHH--HHHHHHHHHH
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHHhcCccCCcEEeee-cccc--------CCCCCCCCCCChHHHHH--HHHHHHHHHH
Confidence 6799999999999876654321 269999983 2111 11110 23799988875 3445666665
Q ss_pred cCccccCccceEE-EEecCcccCccccc
Q 021432 147 EGKTVPSNLSRIL-IRVNSKSLPTFALN 173 (312)
Q Consensus 147 ~g~~~~~~~~rl~-~~~~g~~~~~~ALN 173 (312)
.-. ...+.|+. +.+-|+..-+.||.
T Consensus 731 ~tA--~ssh~RvfiVEvMGR~aG~LAl~ 756 (941)
T 3opy_B 731 QSA--AATRNRVFVVEVQGGNSGYIATH 756 (941)
T ss_dssp HHH--HHC-CEEEEEEECSTTCCHHHHH
T ss_pred HHh--hhcCCcEEEEEeCCcchhHHHHH
Confidence 311 11123443 45666654455554
No 25
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=60.15 E-value=2.4 Score=37.29 Aligned_cols=58 Identities=26% Similarity=0.412 Sum_probs=34.8
Q ss_pred HHHhhhcCCcceeeccc---ccCCCccccccEEEEEcCCcceEee------------ccc-CCCCcceeeccCC
Q 021432 50 CQDILSKKPIEWEPVFR---NNLSRPIRNVDLVVTVGGDGTLLQA------------GHL-IDDSIPVLGVNSD 107 (312)
Q Consensus 50 ~~~~l~~~~~~~~~~~~---~~l~~~~~~~Dlvi~lGGDGT~L~a------------~~~-~~~~~PilGIN~G 107 (312)
+.+.+++.|+++..+.. +.+...+.++|.+|.-||-++.-.. .+. ...++|+|||-.|
T Consensus 29 i~~~l~~~G~~v~v~~~~~~~~~~~~l~~~Dglil~GG~~~~~~~~~~~~l~~~~~~i~~~~~~~~PiLGIC~G 102 (239)
T 1o1y_A 29 MEDIFREKNWSFDYLDTPKGEKLERPLEEYSLVVLLGGYMGAYEEEKYPFLKYEFQLIEEILKKEIPFLGICLG 102 (239)
T ss_dssp HHHHHHHTTCEEEEECGGGTCCCSSCGGGCSEEEECCCSCCTTCTTTCTHHHHHHHHHHHHHHHTCCEEEETHH
T ss_pred HHHHHHhCCCcEEEeCCcCccccccchhcCCEEEECCCCccccCCccChhHHHHHHHHHHHHHCCCCEEEEchh
Confidence 44455556655542221 1234456789999999998665321 111 1346899999877
No 26
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=59.91 E-value=0.95 Score=47.97 Aligned_cols=86 Identities=16% Similarity=0.155 Sum_probs=48.2
Q ss_pred cccEEEEEcCCcceEeecccCC-------CCcceeeccCCCCchhHHhhhhhcccc-ccccccchHHhhhcHHHHHHHHh
Q 021432 75 NVDLVVTVGGDGTLLQAGHLID-------DSIPVLGVNSDPTRGEEVDMLSNEFDA-SRSKGYLCAATVNNFEQLLDNIL 146 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~~~~~-------~~~PilGIN~G~~~~~~~~~~~~~~~~-~~~~GfL~~~~~~~~~~~l~~l~ 146 (312)
+.|.+|+||||||+-.+.++.. .++|++||- +.- -|.+.. ..++||-+.++ .+-++++++.
T Consensus 688 ~Id~LvvIGGdgS~~~a~~L~~~~~~y~~~~I~vVGIP-kTI--------DNDl~gTD~TiGFdTAvn--~~~eaId~i~ 756 (989)
T 3opy_A 688 KFDGLIIIGGFEAFTALYELDAARAQYPIFNIPMCCLP-ATV--------SNNVPGTEYSLGSDTCLN--TLSGYCDAVK 756 (989)
T ss_dssp TCSEEEEEESHHHHHHHHHHHHHTTTCGGGCSCEEEEE-BCS--------SCCCTTCSCCBTHHHHHH--HHHHHHHHHH
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHhhCCCcCCcEEecc-ccc--------cCCCCCCcCCCChHHHHH--HHHHHHHHHH
Confidence 6799999999999866544322 268999983 211 111111 24799987764 3445555554
Q ss_pred cCccccCccceEE-EEecCcccCccccc
Q 021432 147 EGKTVPSNLSRIL-IRVNSKSLPTFALN 173 (312)
Q Consensus 147 ~g~~~~~~~~rl~-~~~~g~~~~~~ALN 173 (312)
.--- ..+.|+. +.+-|+..-+.||.
T Consensus 757 ~tA~--ssh~RvfIVEVMGR~aG~LAl~ 782 (989)
T 3opy_A 757 QSAS--ASRRRTFVVEVQGGYSGYLASY 782 (989)
T ss_dssp HHTC---CCCSEEEEEECCTTCSHHHHH
T ss_pred HHHH--hcCCcEEEEEeCCcchhHHHHH
Confidence 2111 1123443 45666654455554
No 27
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=58.99 E-value=0.94 Score=47.05 Aligned_cols=86 Identities=19% Similarity=0.186 Sum_probs=50.4
Q ss_pred cccEEEEEcCCcceEeecccCC-------CCcceeeccCCCCchhHHhhhhhcccc-ccccccchHHhhhcHHHHHHHHh
Q 021432 75 NVDLVVTVGGDGTLLQAGHLID-------DSIPVLGVNSDPTRGEEVDMLSNEFDA-SRSKGYLCAATVNNFEQLLDNIL 146 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~~~~~-------~~~PilGIN~G~~~~~~~~~~~~~~~~-~~~~GfL~~~~~~~~~~~l~~l~ 146 (312)
+.|.+|+||||||+-.+.++.+ .++|++||- ++- -|.+.. ..++||-+.+.. +-++++++.
T Consensus 483 ~Id~LvvIGGdgS~~~a~~L~~~~~~~~~~~i~vIgiP-kTI--------DNDl~gTD~t~GfdTA~~~--~~eaid~i~ 551 (787)
T 3o8o_A 483 KLDGLIILGGFEGFRSLKQLRDGRTQHPIFNIPMCLIP-ATV--------SNNVPGTEYSLGVDTCLNA--LVNYTDDIK 551 (787)
T ss_dssp TCSEEEEEESHHHHHHHHHHHHHTTTCGGGGSCEEEEE-BCT--------TCCCTTCSCCBTHHHHHHH--HHHHHHHHH
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHHhcCccCCceeecc-ccc--------ccCCCCCcCCCCchHHHHH--HHHHHHHHH
Confidence 6799999999999987765431 259999993 211 111111 237999888753 445666665
Q ss_pred cCccccCccceEE-EEecCcccCccccc
Q 021432 147 EGKTVPSNLSRIL-IRVNSKSLPTFALN 173 (312)
Q Consensus 147 ~g~~~~~~~~rl~-~~~~g~~~~~~ALN 173 (312)
.-. ...+.|+. +.+-|+..-+.||.
T Consensus 552 ~ta--~ss~~rv~iVEvMGR~aG~lAl~ 577 (787)
T 3o8o_A 552 QSA--SATRRRVFVCEVQGGHSGYIASF 577 (787)
T ss_dssp HHH--HHHSSEEEEEEECCTTCTHHHHH
T ss_pred HHh--hccCCcEEEEEeCCCCccHHHHH
Confidence 311 11123443 45556654455554
No 28
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A*
Probab=58.50 E-value=3.6 Score=36.57 Aligned_cols=36 Identities=19% Similarity=0.302 Sum_probs=25.2
Q ss_pred ccccccEEEEEcCCcceEeec----------c-cCCCCcceeeccCC
Q 021432 72 PIRNVDLVVTVGGDGTLLQAG----------H-LIDDSIPVLGVNSD 107 (312)
Q Consensus 72 ~~~~~Dlvi~lGGDGT~L~a~----------~-~~~~~~PilGIN~G 107 (312)
.+.++|.+|+-||-++.-... + .+..++|+|||-.|
T Consensus 45 ~~~~~d~lIl~GGp~~~~d~~~~~~~~~~~i~~~~~~~~PvlGIC~G 91 (250)
T 3m3p_A 45 EIRDCSGLAMMGGPMSANDDLPWMPTLLALIRDAVAQRVPVIGHCLG 91 (250)
T ss_dssp CGGGSSEEEECCCSSCTTSCCTTHHHHHHHHHHHHHHTCCEEEETHH
T ss_pred ccccCCEEEECCCCCcccccchHHHHHHHHHHHHHHcCCCEEEECHH
Confidence 467899999999987642211 1 12346999999877
No 29
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=53.57 E-value=1.9 Score=44.77 Aligned_cols=18 Identities=44% Similarity=0.785 Sum_probs=15.6
Q ss_pred cccEEEEEcCCcceEeec
Q 021432 75 NVDLVVTVGGDGTLLQAG 92 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~ 92 (312)
+.|.+|+||||||+-.|.
T Consensus 99 ~Id~LvvIGGdgS~~~A~ 116 (787)
T 3o8o_A 99 GIDALVVCGGDGSLTGAD 116 (787)
T ss_dssp TEEEEEEEECHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHH
Confidence 569999999999987763
No 30
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=52.19 E-value=4.3 Score=32.67 Aligned_cols=67 Identities=13% Similarity=0.272 Sum_probs=42.8
Q ss_pred ccccEEEEEcCCcceEeecccCCCCcceeeccCCCCchhHHhhhhhccccccccccchH---HhhhcHHHHHHHHhcC
Q 021432 74 RNVDLVVTVGGDGTLLQAGHLIDDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCA---ATVNNFEQLLDNILEG 148 (312)
Q Consensus 74 ~~~Dlvi~lGGDGT~L~a~~~~~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~---~~~~~~~~~l~~l~~g 148 (312)
..+|++|+-||-||++.+... ++|++.+...+....+...+ . ....|++.+ .+++++.+.+.++++.
T Consensus 85 ~~ad~~I~~~G~~t~~Ea~~~---G~P~i~~p~~~~Q~~na~~l----~-~~g~g~~~~~~~~~~~~l~~~i~~ll~~ 154 (170)
T 2o6l_A 85 PKTRAFITHGGANGIYEAIYH---GIPMVGIPLFADQPDNIAHM----K-ARGAAVRVDFNTMSSTDLLNALKRVIND 154 (170)
T ss_dssp TTEEEEEECCCHHHHHHHHHH---TCCEEECCCSTTHHHHHHHH----H-TTTSEEECCTTTCCHHHHHHHHHHHHHC
T ss_pred CCcCEEEEcCCccHHHHHHHc---CCCEEeccchhhHHHHHHHH----H-HcCCeEEeccccCCHHHHHHHHHHHHcC
Confidence 679999999999999888542 58999887653221111111 1 124666654 2466777778777754
No 31
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=51.71 E-value=3.2 Score=35.00 Aligned_cols=68 Identities=10% Similarity=0.133 Sum_probs=43.8
Q ss_pred ccchhHHHhhhhhhhhhhhhH--------HHHHHhhhcCCccee-ecccccCCCccccccEEEEEcCCcceEeeccc
Q 021432 27 ITNPLILQHLENRCKVHKDAI--------NFCQDILSKKPIEWE-PVFRNNLSRPIRNVDLVVTVGGDGTLLQAGHL 94 (312)
Q Consensus 27 ~~~~~~~~~l~~~~~~~~~~~--------~~~~~~l~~~~~~~~-~~~~~~l~~~~~~~Dlvi~lGGDGT~L~a~~~ 94 (312)
-...++.+.|+.+|...+.+. -...-+|.+.++.++ .++-+++..++.++|++++||---|+--+++.
T Consensus 41 ~~v~el~~~L~~~G~~V~faIHPVAGRMPGhmNVLLAEA~VPYd~v~EMdeIN~df~~tDv~lVIGANDvvNpaA~~ 117 (180)
T 1pno_A 41 HALREMADVLKKEGVEVSYAIHPVAGRMPGHMNVLLAEANVPYDEVFELEEINSSFQTADVAFVIGANDVTNPAAKT 117 (180)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECTTCTTSTTHHHHHHHHTTCCGGGEEEHHHHGGGGGGCSEEEEESCCGGGCGGGTT
T ss_pred HHHHHHHHHHHHCCCeEEEEeccccccCCCcceEEEEeeCCCHHHHhhHHHHhhhhhhcCEEEEeccccccCchhcc
Confidence 344566677777776322111 122334555666665 33445666678999999999999999888874
No 32
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=50.82 E-value=3.2 Score=34.85 Aligned_cols=31 Identities=19% Similarity=0.451 Sum_probs=21.5
Q ss_pred cEEEEEcCCcceEeec------ccCCCCcceeeccCC
Q 021432 77 DLVVTVGGDGTLLQAG------HLIDDSIPVLGVNSD 107 (312)
Q Consensus 77 Dlvi~lGGDGT~L~a~------~~~~~~~PilGIN~G 107 (312)
|.+|..||-|+.-... +.+..++|+|||-.|
T Consensus 49 ~~iil~gGpg~~~~~~~~~~l~~~~~~~~PilGIC~G 85 (192)
T 1i1q_B 49 PVLMLSPGPGVPSEAGCMPELLTRLRGKLPIIGICLG 85 (192)
T ss_dssp EEEEECCCSSCGGGSTTHHHHHHHHBTTBCEEEETHH
T ss_pred CeEEECCCCcCchhCchHHHHHHHHhcCCCEEEECcC
Confidence 3488999999853221 122457999999987
No 33
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=50.31 E-value=2 Score=44.51 Aligned_cols=18 Identities=44% Similarity=0.785 Sum_probs=15.7
Q ss_pred cccEEEEEcCCcceEeec
Q 021432 75 NVDLVVTVGGDGTLLQAG 92 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~ 92 (312)
+.|.+|+||||||+-.|.
T Consensus 98 ~Id~LvvIGGdgS~~~A~ 115 (766)
T 3o8o_B 98 GVDALIVCGGDGSLTGAD 115 (766)
T ss_dssp TCCEEEEEECHHHHHHHH
T ss_pred CCCEEEEeCCChhHHHHH
Confidence 579999999999998764
No 34
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=49.86 E-value=3.6 Score=35.40 Aligned_cols=29 Identities=10% Similarity=0.272 Sum_probs=23.9
Q ss_pred cccCCCccccccEEEEEcCCcceEeeccc
Q 021432 66 RNNLSRPIRNVDLVVTVGGDGTLLQAGHL 94 (312)
Q Consensus 66 ~~~l~~~~~~~Dlvi~lGGDGT~L~a~~~ 94 (312)
-+++..++.++|++++||---|+--+++.
T Consensus 112 MdeIN~df~~tDv~lVIGANDvVNPaA~~ 140 (203)
T 2fsv_C 112 LEEINSSFQTADVAFVIGANDVTNPAAKT 140 (203)
T ss_dssp HHHHGGGSTTCSEEEEESCCGGGCGGGTS
T ss_pred HHHHhhhhhhcCEEEEeccccccCchhhc
Confidence 34555678899999999999999888874
No 35
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A
Probab=44.88 E-value=4 Score=34.02 Aligned_cols=33 Identities=21% Similarity=0.347 Sum_probs=21.7
Q ss_pred cccEEEEEcCC-----cceEeecccC-CCCcceeeccCC
Q 021432 75 NVDLVVTVGGD-----GTLLQAGHLI-DDSIPVLGVNSD 107 (312)
Q Consensus 75 ~~Dlvi~lGGD-----GT~L~a~~~~-~~~~PilGIN~G 107 (312)
++|.+|.-||. |..+...+.+ +.++|++||-.|
T Consensus 43 ~~dglil~Gg~~~~~~~~~~~~i~~~~~~~~PilGIC~G 81 (189)
T 1wl8_A 43 NPKGIIFSGGPSLENTGNCEKVLEHYDEFNVPILGICLG 81 (189)
T ss_dssp CCSEEEECCCSCTTCCTTHHHHHHTGGGTCSCEEEETHH
T ss_pred CCCEEEECCCCChhhhhhHHHHHHHHhhCCCeEEEEcHH
Confidence 48999999995 1112222322 457999999877
No 36
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=41.32 E-value=3 Score=35.32 Aligned_cols=68 Identities=15% Similarity=0.211 Sum_probs=40.0
Q ss_pred ccchhHHHhhhhhhhhhhhhH--------HHHHHhhhcCCccee-ecccccCCCccccccEEEEEcCCcceEeeccc
Q 021432 27 ITNPLILQHLENRCKVHKDAI--------NFCQDILSKKPIEWE-PVFRNNLSRPIRNVDLVVTVGGDGTLLQAGHL 94 (312)
Q Consensus 27 ~~~~~~~~~l~~~~~~~~~~~--------~~~~~~l~~~~~~~~-~~~~~~l~~~~~~~Dlvi~lGGDGT~L~a~~~ 94 (312)
-...++.+.|+.+|...+.+. -...-+|.+.++.++ .++-+++..++.++|++++||---|+--+++.
T Consensus 48 ~~v~el~~~L~~~G~~V~faIHPVAGRMPGhMNVLLAEA~VPYd~v~EMdeIN~df~~tDv~lVIGANDvVNPaA~~ 124 (186)
T 2bru_C 48 YPVAEITEKLRARGINVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFADTDTVLVIGANDTVNPAAQD 124 (186)
T ss_dssp HHHHHHHHHHHHHCCEEEEEECSSSSSSSSTHHHHHHHHTCCTTTEEESCCCHHHHHHCSEEEECBCGGGGCGGGTT
T ss_pred HHHHHHHHHHHHCCCeEEEEeccccccCCCcceEEEEecCCCHHHHhhHHHHhcccccCCEEEEeccccccCccccC
Confidence 334556666666665322111 011223334445544 23345555578899999999999999888874
No 37
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=41.12 E-value=3.8 Score=34.70 Aligned_cols=78 Identities=18% Similarity=0.259 Sum_probs=46.3
Q ss_pred ccchhHHHhhhhhhhhhhhhH--------HHHHHhhhcCCccee-ecccccCCCccccccEEEEEcCCcceEeecccC--
Q 021432 27 ITNPLILQHLENRCKVHKDAI--------NFCQDILSKKPIEWE-PVFRNNLSRPIRNVDLVVTVGGDGTLLQAGHLI-- 95 (312)
Q Consensus 27 ~~~~~~~~~l~~~~~~~~~~~--------~~~~~~l~~~~~~~~-~~~~~~l~~~~~~~Dlvi~lGGDGT~L~a~~~~-- 95 (312)
-...++.+.|+.+|...+.+. -...-+|.+.++.++ .++-+++..++.++|++++||---|+--+++.-
T Consensus 40 ~~v~el~~~L~~~G~~V~faIHPVAGRMPGhMNVLLAEA~VPYd~v~EMdeIN~df~~tDv~lVIGANDvVNPaA~~dp~ 119 (184)
T 1d4o_A 40 YPIADLVKMLSEQGKKVRFGIHPVAGRMPGQLNVLLAEAGVPYDIVLEMDEINHDFPDTDLVLVIGANDTVNSAAQEDPN 119 (184)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECTTCSSSTTHHHHHHHHHTCCGGGEEEHHHHGGGGGGCSEEEEESCSGGGCTHHHHCTT
T ss_pred HHHHHHHHHHHHCCCeEEEEeccccccCCCcceEEEEEecCCHHHHHhHHHHhhhhhhcCEEEEecCCccCCCccccCCC
Confidence 344566666666665322111 112233444555554 333456666789999999999999998888632
Q ss_pred -C-CCcceeec
Q 021432 96 -D-DSIPVLGV 104 (312)
Q Consensus 96 -~-~~~PilGI 104 (312)
+ .+.|||-+
T Consensus 120 SpI~GMPvl~v 130 (184)
T 1d4o_A 120 SIIAGMPVLEV 130 (184)
T ss_dssp STTTTCCCCCG
T ss_pred CCccCCeeeeh
Confidence 1 34566554
No 38
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=40.39 E-value=4.1 Score=35.17 Aligned_cols=38 Identities=26% Similarity=0.447 Sum_probs=27.7
Q ss_pred ccCCCccccccEEEEEcCCcceEeecccC---C-CCcceeec
Q 021432 67 NNLSRPIRNVDLVVTVGGDGTLLQAGHLI---D-DSIPVLGV 104 (312)
Q Consensus 67 ~~l~~~~~~~Dlvi~lGGDGT~L~a~~~~---~-~~~PilGI 104 (312)
+++..++.++|++++||---|+--+++.- + .+.|||-+
T Consensus 112 deIN~df~~tDv~lVIGANDvVNPaA~~dp~SpI~GMPvL~v 153 (207)
T 1djl_A 112 DEINHDFPDTDLVLVIGANDTVNSAAQEDPNSIIAGMPVLEV 153 (207)
T ss_dssp HHHGGGGGGCSEEEEESCCGGGCTHHHHCTTSTTTTCCCCCG
T ss_pred HHHhhhhhhcCEEEEeccccccCCccccCCCCCccCCeeecc
Confidence 45556788999999999999998887632 1 34565544
No 39
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A*
Probab=40.24 E-value=7.7 Score=39.36 Aligned_cols=59 Identities=24% Similarity=0.250 Sum_probs=39.1
Q ss_pred HHHHHhhhcCCcceeecccccCCCccccccEEEEEcCCcceEeec-----------cc-CCCCcceeeccCC
Q 021432 48 NFCQDILSKKPIEWEPVFRNNLSRPIRNVDLVVTVGGDGTLLQAG-----------HL-IDDSIPVLGVNSD 107 (312)
Q Consensus 48 ~~~~~~l~~~~~~~~~~~~~~l~~~~~~~Dlvi~lGGDGT~L~a~-----------~~-~~~~~PilGIN~G 107 (312)
..+.+.+.+.|.++.++..+. .....++|.||+-||-|..-... +. +..++|+|||-.|
T Consensus 460 ~~l~~~l~~~G~~v~Vv~~d~-~~~~~~~DgIIlsGGPg~p~d~~~p~i~~~~~lI~~a~~~~iPiLGIClG 530 (645)
T 3r75_A 460 AMIAQQLSSLGLATEVCGVHD-AVDLARYDVVVMGPGPGDPSDAGDPRIARLYAWLRHLIDEGKPFMAVCLS 530 (645)
T ss_dssp HHHHHHHHHTTCEEEEEETTC-CCCGGGCSEEEECCCSSCTTCTTSHHHHHHHHHHHHHHHHTCCEEEETHH
T ss_pred HHHHHHHHHCCCEEEEEECCC-cccccCCCEEEECCCCCChhhhhhhhHHHHHHHHHHHHHCCCCEEEECHH
Confidence 455666777887766553222 22356889999999998764432 11 2347999999987
No 40
>2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens}
Probab=37.06 E-value=13 Score=31.91 Aligned_cols=34 Identities=18% Similarity=0.389 Sum_probs=19.1
Q ss_pred ccccEEEEEcCCcceEee-----cc-cCCCCcceeeccCC
Q 021432 74 RNVDLVVTVGGDGTLLQA-----GH-LIDDSIPVLGVNSD 107 (312)
Q Consensus 74 ~~~Dlvi~lGGDGT~L~a-----~~-~~~~~~PilGIN~G 107 (312)
.++|.+|.-||-++.-.. .+ ..+.++|+|||-.|
T Consensus 66 ~~~dglil~Gg~~~~~~~~~~~~~~~~~~~~~PilGIC~G 105 (218)
T 2vpi_A 66 QGFRAIIISGGPNSVYAEDAPWFDPAIFTIGKPVLGICYG 105 (218)
T ss_dssp HTCSEEEEEC---------CCCCCGGGGTSSCCEEEETHH
T ss_pred cCCCEEEECCCCcccccccchhHHHHHHHcCCCEEEEcHH
Confidence 358999999997765321 11 12457999999877
No 41
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=36.58 E-value=20 Score=32.49 Aligned_cols=69 Identities=20% Similarity=0.288 Sum_probs=44.4
Q ss_pred ccccccEEEEEcCCcceEeecccCCCCcceeeccCCCCchhHHhhhhhccccccccccchH-----HhhhcHHHHHHHHh
Q 021432 72 PIRNVDLVVTVGGDGTLLQAGHLIDDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCA-----ATVNNFEQLLDNIL 146 (312)
Q Consensus 72 ~~~~~Dlvi~lGGDGT~L~a~~~~~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~-----~~~~~~~~~l~~l~ 146 (312)
.+..+|++|+=||=||++.+.. .++|++.+............ +. ....|.+.. .+++++.+.+.+++
T Consensus 283 ll~~ad~~v~~~G~~t~~Ea~~---~G~P~v~~p~~~~q~~~a~~----~~-~~g~g~~~~~~~~~~~~~~l~~ai~~ll 354 (391)
T 3tsa_A 283 FLRTCELVICAGGSGTAFTATR---LGIPQLVLPQYFDQFDYARN----LA-AAGAGICLPDEQAQSDHEQFTDSIATVL 354 (391)
T ss_dssp TGGGCSEEEECCCHHHHHHHHH---TTCCEEECCCSTTHHHHHHH----HH-HTTSEEECCSHHHHTCHHHHHHHHHHHH
T ss_pred HHhhCCEEEeCCCHHHHHHHHH---hCCCEEecCCcccHHHHHHH----HH-HcCCEEecCcccccCCHHHHHHHHHHHH
Confidence 4568999999999999877754 36899888654321111111 11 124666654 35778888888888
Q ss_pred cC
Q 021432 147 EG 148 (312)
Q Consensus 147 ~g 148 (312)
+.
T Consensus 355 ~~ 356 (391)
T 3tsa_A 355 GD 356 (391)
T ss_dssp TC
T ss_pred cC
Confidence 65
No 42
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=35.65 E-value=10 Score=31.77 Aligned_cols=35 Identities=23% Similarity=0.434 Sum_probs=21.6
Q ss_pred cccccEEEEEc-CCc-c---------eEeeccc-CCCCcceeeccCC
Q 021432 73 IRNVDLVVTVG-GDG-T---------LLQAGHL-IDDSIPVLGVNSD 107 (312)
Q Consensus 73 ~~~~Dlvi~lG-GDG-T---------~L~a~~~-~~~~~PilGIN~G 107 (312)
+.++|.+|.-| ||- + +....+. ++.++|++||-.|
T Consensus 38 l~~~d~lil~G~g~~~~~~~~l~~~~~~~~i~~~~~~~~PilGIC~G 84 (200)
T 1ka9_H 38 HEEADLLVLPGQGHFGQVMRAFQESGFVERVRRHLERGLPFLGICVG 84 (200)
T ss_dssp CSSCSEEEECCCSCHHHHHHTTSSSCTHHHHHHHHHTTCCEEECTHH
T ss_pred cccCCEEEECCCCcHHHHHHHHHhcCHHHHHHHHHHcCCeEEEEcHH
Confidence 56789988866 442 2 1112221 2457999999887
No 43
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=35.13 E-value=14 Score=33.87 Aligned_cols=69 Identities=19% Similarity=0.235 Sum_probs=42.0
Q ss_pred ccccccEEEEEcCCcceEeecccCCCCcceeeccCCCCchhHHhhhhhccccccccccchHH---hhhcHHHHHHHHhcC
Q 021432 72 PIRNVDLVVTVGGDGTLLQAGHLIDDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAA---TVNNFEQLLDNILEG 148 (312)
Q Consensus 72 ~~~~~Dlvi~lGGDGT~L~a~~~~~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~---~~~~~~~~l~~l~~g 148 (312)
.+..+|++|+=||=||++.|.. .++|++.+..+......-+. +. ....|.+.+. +++++.+++.++++.
T Consensus 297 ll~~ad~~v~~gG~~t~~Ea~~---~G~P~v~~p~~~~q~~~a~~----~~-~~g~g~~~~~~~~~~~~l~~ai~~ll~~ 368 (398)
T 4fzr_A 297 IMPACDVVVHHGGHGTTLTCLS---EGVPQVSVPVIAEVWDSARL----LH-AAGAGVEVPWEQAGVESVLAACARIRDD 368 (398)
T ss_dssp HGGGCSEEEECCCHHHHHHHHH---TTCCEEECCCSGGGHHHHHH----HH-HTTSEEECC-------CHHHHHHHHHHC
T ss_pred HHhhCCEEEecCCHHHHHHHHH---hCCCEEecCCchhHHHHHHH----HH-HcCCEEecCcccCCHHHHHHHHHHHHhC
Confidence 3567999999999898877754 36899988664221111111 11 1246766543 567888888888764
No 44
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=34.70 E-value=11 Score=34.37 Aligned_cols=69 Identities=10% Similarity=0.072 Sum_probs=44.3
Q ss_pred ccccccEEEEEcCCcceEeecccCCCCcceeeccCCCCchhHHhhhhhccccccccccchH---HhhhcHHHHHHHHhcC
Q 021432 72 PIRNVDLVVTVGGDGTLLQAGHLIDDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCA---ATVNNFEQLLDNILEG 148 (312)
Q Consensus 72 ~~~~~Dlvi~lGGDGT~L~a~~~~~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~---~~~~~~~~~l~~l~~g 148 (312)
.+..+|++|+=||=||++.+.. .++|++.+..++....+-.. +.. ...|.+.+ .+++++.+++.++++.
T Consensus 276 ~l~~~d~~v~~~G~~t~~Ea~~---~G~P~v~~p~~~dq~~~a~~----~~~-~g~g~~~~~~~~~~~~l~~~i~~ll~~ 347 (384)
T 2p6p_A 276 VAPTCDLLVHHAGGVSTLTGLS---AGVPQLLIPKGSVLEAPARR----VAD-YGAAIALLPGEDSTEAIADSCQELQAK 347 (384)
T ss_dssp HGGGCSEEEECSCTTHHHHHHH---TTCCEEECCCSHHHHHHHHH----HHH-HTSEEECCTTCCCHHHHHHHHHHHHHC
T ss_pred HHhhCCEEEeCCcHHHHHHHHH---hCCCEEEccCcccchHHHHH----HHH-CCCeEecCcCCCCHHHHHHHHHHHHcC
Confidence 4578999999999999877754 36899999775211111111 111 23566554 2567788888888764
No 45
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=32.20 E-value=28 Score=34.12 Aligned_cols=33 Identities=24% Similarity=0.373 Sum_probs=21.8
Q ss_pred cccEEEEEcCCcceEee-----cc-cCCCCcceeeccCC
Q 021432 75 NVDLVVTVGGDGTLLQA-----GH-LIDDSIPVLGVNSD 107 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a-----~~-~~~~~~PilGIN~G 107 (312)
++|.||.-||-+++-.. .+ .++.++|+|||-.|
T Consensus 53 ~~dgIILsGGp~sv~~~~~~~~~~~~~~~~~PvLGIC~G 91 (527)
T 3tqi_A 53 NPHGIILSGGPETVTLSHTLRAPAFIFEIGCPVLGICYG 91 (527)
T ss_dssp CCSEEEECCCCC---------CCCSTTTSSSCEEEETHH
T ss_pred CCCEEEECCcCcccccCCChhhHHHHHhcCCCEEEEChH
Confidence 56999999998876532 11 23457999999887
No 46
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=30.80 E-value=14 Score=33.75 Aligned_cols=69 Identities=22% Similarity=0.232 Sum_probs=44.7
Q ss_pred ccccccEEEEEcCCcceEeecccCCCCcceeeccCCCCchhHHhhhhhccccccccccchHH---hhhcHHHHHHHHhcC
Q 021432 72 PIRNVDLVVTVGGDGTLLQAGHLIDDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCAA---TVNNFEQLLDNILEG 148 (312)
Q Consensus 72 ~~~~~Dlvi~lGGDGT~L~a~~~~~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~~---~~~~~~~~l~~l~~g 148 (312)
.+..+|++|+=||=+|++.|.. .++|++.+..+.......+ .+.. ...|++... +++++.+++.++++.
T Consensus 305 ~l~~ad~~v~~~g~~t~~Ea~a---~G~P~v~~p~~~~q~~~~~----~v~~-~g~g~~~~~~~~~~~~l~~ai~~ll~~ 376 (412)
T 3otg_A 305 LLPHVDLVVHHGGSGTTLGALG---AGVPQLSFPWAGDSFANAQ----AVAQ-AGAGDHLLPDNISPDSVSGAAKRLLAE 376 (412)
T ss_dssp HGGGCSEEEESCCHHHHHHHHH---HTCCEEECCCSTTHHHHHH----HHHH-HTSEEECCGGGCCHHHHHHHHHHHHHC
T ss_pred HHhcCcEEEECCchHHHHHHHH---hCCCEEecCCchhHHHHHH----HHHH-cCCEEecCcccCCHHHHHHHHHHHHhC
Confidence 3567999999999888877754 3589998876532111111 1111 246777654 567888888888764
No 47
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima}
Probab=30.20 E-value=12 Score=31.67 Aligned_cols=52 Identities=23% Similarity=0.236 Sum_probs=31.5
Q ss_pred hhhcCCcceeecccccCCCccccccEEEEEcCCcceEe----------eccc-CCCCcceeeccCC
Q 021432 53 ILSKKPIEWEPVFRNNLSRPIRNVDLVVTVGGDGTLLQ----------AGHL-IDDSIPVLGVNSD 107 (312)
Q Consensus 53 ~l~~~~~~~~~~~~~~l~~~~~~~Dlvi~lGGDGT~L~----------a~~~-~~~~~PilGIN~G 107 (312)
.|++.|.++..+... +.+.++|.+|.-||..+... ..+. .+.++|++||-.|
T Consensus 38 ~l~~~g~~~~~~~~~---~~l~~~d~iil~GG~~~~~~~~~~~~~~~~~i~~~~~~g~PilGIC~G 100 (208)
T 2iss_D 38 ALHKLGVETLIVKLP---EQLDMVDGLILPGGESTTMIRILKEMDMDEKLVERINNGLPVFATCAG 100 (208)
T ss_dssp HHHHTTCEEEEECSG---GGGGGCSEEEECSSCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEETHH
T ss_pred HHHHCCCEEEEeCCh---HHHhhCCEEEECCCcHHHHHhhhhhhhHHHHHHHHHHCCCeEEEECHH
Confidence 344456655544321 23568999999998765321 1121 2357999999877
No 48
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima}
Probab=29.07 E-value=7.8 Score=32.61 Aligned_cols=51 Identities=14% Similarity=0.083 Sum_probs=29.3
Q ss_pred hhcCCcceeecccccCCCccccccEEEEEcCCcceE--------------eeccc-CCCCcceeeccCC
Q 021432 54 LSKKPIEWEPVFRNNLSRPIRNVDLVVTVGGDGTLL--------------QAGHL-IDDSIPVLGVNSD 107 (312)
Q Consensus 54 l~~~~~~~~~~~~~~l~~~~~~~Dlvi~lGGDGT~L--------------~a~~~-~~~~~PilGIN~G 107 (312)
|+..|.++..+...+ .+.++|.+|+-||-++.- ...+. .+.++|++||-.|
T Consensus 23 l~~~g~~~~~~~~~~---~~~~~d~lil~Gg~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pilgIC~G 88 (213)
T 3d54_D 23 LEINGFEPSYVGLDD---KLDDYELIILPGGFSYGDYLRPGAVAAREKIAFEIAKAAERGKLIMGICNG 88 (213)
T ss_dssp HHTTTCEEEEECTTC---CCSSCSEEEECEECGGGGCSSTTHHHHTSTTHHHHHHHHHHTCEEEECHHH
T ss_pred HHHCCCEEEEEecCC---CcccCCEEEECCCCchhhhhccccccccHHHHHHHHHHHHCCCEEEEECHH
Confidence 334455544443221 356799999999965311 11111 1346899999887
No 49
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1
Probab=28.95 E-value=8.9 Score=32.16 Aligned_cols=33 Identities=24% Similarity=0.355 Sum_probs=22.6
Q ss_pred cccEEEEEcCCcceEee---------cccCCCCcceeeccCC
Q 021432 75 NVDLVVTVGGDGTLLQA---------GHLIDDSIPVLGVNSD 107 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a---------~~~~~~~~PilGIN~G 107 (312)
++|.+|.-||-|+.-.. .+.+..++|+|||-.|
T Consensus 45 ~~dglil~gG~~~~~~~~~~~~~~~~i~~~~~~~PvLGIC~G 86 (195)
T 1qdl_B 45 DPDRLIISPGPGTPEKREDIGVSLDVIKYLGKRTPILGVCLG 86 (195)
T ss_dssp CCSEEEECCCSSCTTSHHHHTTHHHHHHHHTTTSCEEEETHH
T ss_pred CCCEEEECCCCCChhhhhhhhHHHHHHHHhcCCCcEEEEehH
Confidence 58999888997664331 1112357999999877
No 50
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii}
Probab=28.83 E-value=17 Score=29.88 Aligned_cols=36 Identities=22% Similarity=0.519 Sum_probs=24.8
Q ss_pred ccccccEEEEEcCCcceEee-------cccC-CCCcceeeccCC
Q 021432 72 PIRNVDLVVTVGGDGTLLQA-------GHLI-DDSIPVLGVNSD 107 (312)
Q Consensus 72 ~~~~~Dlvi~lGGDGT~L~a-------~~~~-~~~~PilGIN~G 107 (312)
.+.++|.+|.-||-++.... ...+ +.++|+|||-.|
T Consensus 34 ~~~~~dglil~GG~~~~~~~~~~~~~~~~~i~~~~~PilGIC~G 77 (186)
T 2ywj_A 34 DLEGIDALIIPGGESTAIGKLMKKYGLLEKIKNSNLPILGTCAG 77 (186)
T ss_dssp GGTTCSEEEECCSCHHHHHHHHHHTTHHHHHHTCCCCEEEETHH
T ss_pred HhccCCEEEECCCCchhhhhhhhccCHHHHHHhcCCcEEEECHH
Confidence 35678999999997764311 0112 457999999877
No 51
>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=27.73 E-value=13 Score=30.67 Aligned_cols=53 Identities=15% Similarity=0.371 Sum_probs=30.0
Q ss_pred HhhhcCCcceeecccccCCCccccccEEEEEcCCcceE----------eeccc-CCCC-cceeeccCC
Q 021432 52 DILSKKPIEWEPVFRNNLSRPIRNVDLVVTVGGDGTLL----------QAGHL-IDDS-IPVLGVNSD 107 (312)
Q Consensus 52 ~~l~~~~~~~~~~~~~~l~~~~~~~Dlvi~lGGDGT~L----------~a~~~-~~~~-~PilGIN~G 107 (312)
+.|++.|.++..+... ..+.++|.+|.-||-++-. ...+. .+.+ +|++||-.|
T Consensus 19 ~~l~~~G~~~~~~~~~---~~l~~~dglil~GG~~~~~~~~~~~~~~~~~i~~~~~~~~~PilGiC~G 83 (191)
T 2ywd_A 19 EALKRLGIEAKEVRKK---EHLEGLKALIVPGGESTTIGKLAREYGIEDEVRKRVEEGSLALFGTCAG 83 (191)
T ss_dssp HHHHTTTCCCEEECSG---GGGTTCSEEEECSSCHHHHHHHHHHTTHHHHHHHHHHTTCCEEEEETHH
T ss_pred HHHHHCCCEEEEeCCh---hhhccCCEEEECCCChhhhHHhhhhhhHHHHHHHHHHCCCCeEEEECHH
Confidence 3444556554444221 1346789999999943211 11111 2356 999999877
No 52
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=27.58 E-value=7.8 Score=32.72 Aligned_cols=54 Identities=15% Similarity=0.084 Sum_probs=29.9
Q ss_pred HHHhhhcCCcceeecccccCCCccccccEEEEEcCCcceE------eeccc----CCCCcceeeccCC
Q 021432 50 CQDILSKKPIEWEPVFRNNLSRPIRNVDLVVTVGGDGTLL------QAGHL----IDDSIPVLGVNSD 107 (312)
Q Consensus 50 ~~~~l~~~~~~~~~~~~~~l~~~~~~~Dlvi~lGGDGT~L------~a~~~----~~~~~PilGIN~G 107 (312)
+.+.|++.|.++..+... +.+.++|.+|.=|| |..- ..... ...++|+|||-.|
T Consensus 18 i~~al~~~G~~~~v~~~~---~~l~~~D~lilPG~-g~~~~~~~~~~~~~~i~~~~~~~~PvlGIClG 81 (211)
T 4gud_A 18 VKFAIERLGYAVTISRDP---QVVLAADKLFLPGV-GTASEAMKNLTERDLIELVKRVEKPLLGICLG 81 (211)
T ss_dssp HHHHHHHTTCCEEEECCH---HHHHHCSEEEECCC-SCHHHHHHHHHHTTCHHHHHHCCSCEEEETHH
T ss_pred HHHHHHHCCCEEEEECCH---HHHhCCCEEEECCC-CCHHHHHHHHHhcChHHHHHHcCCCEEEEchh
Confidence 344455666665544211 23567898887663 3321 11111 1247899999887
No 53
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=26.30 E-value=22 Score=34.62 Aligned_cols=33 Identities=18% Similarity=0.471 Sum_probs=23.9
Q ss_pred cccEEEEEcCCcceEeec-----c-cCCCCcceeeccCC
Q 021432 75 NVDLVVTVGGDGTLLQAG-----H-LIDDSIPVLGVNSD 107 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~-----~-~~~~~~PilGIN~G 107 (312)
++|.+|.-||-++..... + .++.++|+|||-.|
T Consensus 42 ~~dgiIlsGGp~s~~~~~~~~~~~~~~~~~~PvLGIC~G 80 (503)
T 2ywb_A 42 RPQALILSGGPRSVFDPDAPRPDPRLFSSGLPLLGICYG 80 (503)
T ss_dssp CCSEEEECCCSSCSSCTTCCCCCGGGGCSSCCEEEETHH
T ss_pred CCCEEEECCCCchhccCCCcchHHHHHhCCCCEEEECHH
Confidence 469999999988765421 1 23457999999887
No 54
>3riy_A NAD-dependent deacetylase sirtuin-5; desuccinylase, demalonylase, posttranslational modification, binding domain, rossmann fold domain; HET: SLL NAD; 1.55A {Homo sapiens} SCOP: c.31.1.5 PDB: 3rig_A* 4f4u_A* 4f56_A* 4hda_A* 2b4y_A* 2nyr_A* 4g1c_A*
Probab=25.94 E-value=35 Score=30.54 Aligned_cols=38 Identities=24% Similarity=0.438 Sum_probs=31.5
Q ss_pred cccccEEEEEcCCcceEeecccC----CCCcceeeccCCCCc
Q 021432 73 IRNVDLVVTVGGDGTLLQAGHLI----DDSIPVLGVNSDPTR 110 (312)
Q Consensus 73 ~~~~Dlvi~lGGDGT~L~a~~~~----~~~~PilGIN~G~~~ 110 (312)
++++|+++++|=-+++--++++. ..+.|++=||.+++.
T Consensus 210 ~~~aDl~lviGTSl~V~Paa~l~~~a~~~g~~~v~IN~~~t~ 251 (273)
T 3riy_A 210 LAHCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFNTETTP 251 (273)
T ss_dssp HHHCSEEEEESCCSCEETGGGHHHHHHHTTCCEEEEESSCCT
T ss_pred HhcCCEEEEEeeCCcchhHHHhHHHHHHCCCEEEEECCCCCC
Confidence 46899999999999998877653 257999999999763
No 55
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1
Probab=25.06 E-value=16 Score=31.19 Aligned_cols=53 Identities=17% Similarity=0.218 Sum_probs=32.6
Q ss_pred HhhhcCCcceeecccccCCCccccccEEEEEcCCcceEe----------eccc-CCCCcceeeccCC
Q 021432 52 DILSKKPIEWEPVFRNNLSRPIRNVDLVVTVGGDGTLLQ----------AGHL-IDDSIPVLGVNSD 107 (312)
Q Consensus 52 ~~l~~~~~~~~~~~~~~l~~~~~~~Dlvi~lGGDGT~L~----------a~~~-~~~~~PilGIN~G 107 (312)
+.|++.|.++..+... ..+.++|.+|.-||-++... ..+. .+.++|++||-.|
T Consensus 40 ~~l~~~G~~~~~~~~~---~~l~~~Dglil~GG~~~~~~~~~~~~~~~~~i~~~~~~~~PilGIC~G 103 (219)
T 1q7r_A 40 RAIEACGAEAVIVKKS---EQLEGLDGLVLPGGESTTMRRLIDRYGLMEPLKQFAAAGKPMFGTCAG 103 (219)
T ss_dssp HHHHHTTCEEEEECSG---GGGTTCSEEEECCCCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEETTH
T ss_pred HHHHHCCCEEEEECCH---HHHhhCCEEEECCCChHHHHHHhhhhHHHHHHHHHHHcCCeEEEECHH
Confidence 3445566665544321 13567999999999765421 1111 2357999999887
No 56
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B*
Probab=23.88 E-value=12 Score=31.09 Aligned_cols=35 Identities=20% Similarity=0.385 Sum_probs=24.2
Q ss_pred cccccEEEEEcCCcceEe----------eccc-CCCCcceeeccCC
Q 021432 73 IRNVDLVVTVGGDGTLLQ----------AGHL-IDDSIPVLGVNSD 107 (312)
Q Consensus 73 ~~~~Dlvi~lGGDGT~L~----------a~~~-~~~~~PilGIN~G 107 (312)
+.++|.+|.-||-++.-. ..+. ...++|++||-.|
T Consensus 36 l~~~d~iil~GG~~~~~~~~~~~~~~~~~i~~~~~~~~pilgIC~G 81 (196)
T 2nv0_A 36 LNEVDGLILPGGESTTMRRLIDTYQFMEPLREFAAQGKPMFGTCAG 81 (196)
T ss_dssp GGGCSEEEECCSCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEETHH
T ss_pred HhhCCEEEECCCChhhHHHHhhhHHHHHHHHHHHHCCCcEEEECHH
Confidence 567999999999765421 1111 2357999999877
No 57
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=23.59 E-value=16 Score=34.17 Aligned_cols=69 Identities=14% Similarity=0.206 Sum_probs=43.6
Q ss_pred ccccccEEEEEcCCcceEeecccCCCCcceeeccCCCCchhHHhhhhhccccccccccchH---HhhhcHHHHHHHHhcC
Q 021432 72 PIRNVDLVVTVGGDGTLLQAGHLIDDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCA---ATVNNFEQLLDNILEG 148 (312)
Q Consensus 72 ~~~~~Dlvi~lGGDGT~L~a~~~~~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~---~~~~~~~~~l~~l~~g 148 (312)
.+..+|++|+=||=||++.+.. .++|++.+..++....+-.. +.. ...|.+.+ .+++++.+.+.++++.
T Consensus 332 ll~~ad~~V~~~G~~t~~Ea~~---~G~P~i~~p~~~dQ~~na~~----l~~-~g~g~~~~~~~~~~~~l~~~i~~ll~~ 403 (441)
T 2yjn_A 332 LLPTCAATVHHGGPGSWHTAAI---HGVPQVILPDGWDTGVRAQR----TQE-FGAGIALPVPELTPDQLRESVKRVLDD 403 (441)
T ss_dssp HGGGCSEEEECCCHHHHHHHHH---TTCCEEECCCSHHHHHHHHH----HHH-HTSEEECCTTTCCHHHHHHHHHHHHHC
T ss_pred HHhhCCEEEECCCHHHHHHHHH---hCCCEEEeCCcccHHHHHHH----HHH-cCCEEEcccccCCHHHHHHHHHHHhcC
Confidence 3578999999999999887754 36899988764211111111 111 23565544 2567788888888764
No 58
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=23.36 E-value=31 Score=35.21 Aligned_cols=57 Identities=14% Similarity=0.194 Sum_probs=31.0
Q ss_pred HHhhhcCCcceeecccccCCCcc--ccccEEEEEcCCcceEee-c----c-cCCCCcceeeccCC
Q 021432 51 QDILSKKPIEWEPVFRNNLSRPI--RNVDLVVTVGGDGTLLQA-G----H-LIDDSIPVLGVNSD 107 (312)
Q Consensus 51 ~~~l~~~~~~~~~~~~~~l~~~~--~~~Dlvi~lGGDGT~L~a-~----~-~~~~~~PilGIN~G 107 (312)
.+.+++.|+....+..+...+.+ .++|.+|.-||-++.... + + .++.++|+|||-.|
T Consensus 46 ar~lre~Gv~~~ivp~~~~~e~i~~~~~dGIILsGGp~s~~~~~~~~~~~~i~~~g~PvLGIC~G 110 (697)
T 2vxo_A 46 DRRVRELFVQSEIFPLETPAFAIKEQGFRAIIISGGPNSVYAEDAPWFDPAIFTIGKPVLGICYG 110 (697)
T ss_dssp HHHHHHTTCCEEEEETTCCHHHHHHHTCSEEEEEECC-------CCCCCGGGTTSSCCEEEEEHH
T ss_pred HHHHHHCCCEEEEEECCCCHHHHhhcCCCEEEECCCCCcccCccchhHHHHHHhCCCCEEEECHH
Confidence 34455666665544322211112 468999999999987642 1 1 23457999999887
No 59
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B*
Probab=22.93 E-value=18 Score=34.22 Aligned_cols=58 Identities=17% Similarity=0.206 Sum_probs=35.8
Q ss_pred HHHhhhcCCcceeecccccCCCc--cccccEEEEEcCCcceEee------cc-cCCCCcceeeccCC
Q 021432 50 CQDILSKKPIEWEPVFRNNLSRP--IRNVDLVVTVGGDGTLLQA------GH-LIDDSIPVLGVNSD 107 (312)
Q Consensus 50 ~~~~l~~~~~~~~~~~~~~l~~~--~~~~Dlvi~lGGDGT~L~a------~~-~~~~~~PilGIN~G 107 (312)
+.+.|.+.|..+..+..+.-... ..++|.+|.-||-|.-... .+ .++.++|+|||-.|
T Consensus 204 i~r~L~~~G~~v~vvp~~~~~e~i~~~~~DGliLsGGPgdp~~~~~~~~~Ir~~~~~~~PILGIClG 270 (379)
T 1a9x_B 204 ILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLG 270 (379)
T ss_dssp HHHHHHHTTEEEEEEETTCCHHHHHTTCCSEEEECCCSBCSTTCHHHHHHHHHHTTSCCCEEEETHH
T ss_pred HHHHHHHCCCEEEEEeccCCHHHHhhcCCCEEEEeCCCCChHHHHHHHHHHHHHHHcCCCEEEECch
Confidence 55566777877665532211111 1368999999997765432 22 23457999999887
No 60
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=22.89 E-value=20 Score=35.18 Aligned_cols=33 Identities=21% Similarity=0.425 Sum_probs=23.4
Q ss_pred cccEEEEEcCCcceEee-----cc-cCCCCcceeeccCC
Q 021432 75 NVDLVVTVGGDGTLLQA-----GH-LIDDSIPVLGVNSD 107 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a-----~~-~~~~~~PilGIN~G 107 (312)
++|.+|.-||-++.... .+ .++.++|+|||-.|
T Consensus 50 ~~dgiILsGGp~s~~~~~~~~~~~~~~~~g~PvLGIC~G 88 (525)
T 1gpm_A 50 NPSGIILSGGPESTTEENSPRAPQYVFEAGVPVFGVCYG 88 (525)
T ss_dssp CCSEEEECCCSSCTTSTTCCCCCGGGGTSSSCEEEETHH
T ss_pred CCCEEEECCcCccccccCCcchHHHHHHCCCCEEEEChH
Confidence 45999999998765432 11 23457999999887
No 61
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=22.32 E-value=23 Score=35.09 Aligned_cols=33 Identities=27% Similarity=0.585 Sum_probs=23.3
Q ss_pred cccEEEEEcCCcceEeec-----c-cC----CCCcceeeccCC
Q 021432 75 NVDLVVTVGGDGTLLQAG-----H-LI----DDSIPVLGVNSD 107 (312)
Q Consensus 75 ~~Dlvi~lGGDGT~L~a~-----~-~~----~~~~PilGIN~G 107 (312)
++|.+|.-||-++..... . .+ ..++|+|||-.|
T Consensus 50 ~~dgIIlsGGp~s~~~~~~~~~~~~l~~~a~~~g~PvLGIC~G 92 (556)
T 3uow_A 50 NIKGVILSGGPYSVTEAGSPHLKKEVFEYFLEKKIPIFGICYG 92 (556)
T ss_dssp CEEEEEECCCSCCTTSTTCCCCCHHHHHHHHHTTCCEEEETHH
T ss_pred CCCEEEECCCCCcccccCCcchhHHHHHHhhhcCCCEEEECHH
Confidence 789999999988764321 1 11 237999999887
No 62
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=22.32 E-value=22 Score=32.83 Aligned_cols=67 Identities=18% Similarity=0.213 Sum_probs=42.6
Q ss_pred cccccEEEEEcCCcceEeecccCCCCcceeeccCCCCchhHHhhhhhccccccccccchH---HhhhcHHHHHHHHhcC
Q 021432 73 IRNVDLVVTVGGDGTLLQAGHLIDDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCA---ATVNNFEQLLDNILEG 148 (312)
Q Consensus 73 ~~~~Dlvi~lGGDGT~L~a~~~~~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~---~~~~~~~~~l~~l~~g 148 (312)
+..+|++|+=||=||++.+... ++|++.+........+...+. ....|...+ .+++++.++++++ +.
T Consensus 300 l~~~d~~v~~~G~~t~~Ea~~~---G~P~i~~p~~~dQ~~na~~l~-----~~g~g~~~~~~~~~~~~l~~~i~~l-~~ 369 (416)
T 1rrv_A 300 FRRVAAVIHHGSAGTEHVATRA---GVPQLVIPRNTDQPYFAGRVA-----ALGIGVAHDGPTPTFESLSAALTTV-LA 369 (416)
T ss_dssp GGGSSEEEECCCHHHHHHHHHH---TCCEEECCCSBTHHHHHHHHH-----HHTSEEECSSSCCCHHHHHHHHHHH-TS
T ss_pred hccCCEEEecCChhHHHHHHHc---CCCEEEccCCCCcHHHHHHHH-----HCCCccCCCCCCCCHHHHHHHHHHh-hC
Confidence 4689999999999999888653 589998876532211111111 123555443 3567788888887 43
No 63
>3ixq_A Ribose-5-phosphate isomerase A; structural genomics, pentose phosphate pathway, carbon fixation, NPPSFA; HET: PGO; 1.78A {Methanocaldococcus jannaschii}
Probab=21.82 E-value=41 Score=29.44 Aligned_cols=19 Identities=26% Similarity=0.466 Sum_probs=16.6
Q ss_pred ccccCCeeeeecccchHHH
Q 021432 204 NCRSSGLRVSTAAGSSAAM 222 (312)
Q Consensus 204 ~~~gDGviVsTptGSTAY~ 222 (312)
+|--||++|.=.||||++.
T Consensus 16 ~~V~~gmvvGlGTGSTv~~ 34 (226)
T 3ixq_A 16 KLVKDGMVIGLGTGSTAAL 34 (226)
T ss_dssp GGCCTTCEEEECCSHHHHH
T ss_pred HhCCCCCEEEeCcHHHHHH
Confidence 4667999999999999885
No 64
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B
Probab=21.77 E-value=17 Score=30.32 Aligned_cols=34 Identities=26% Similarity=0.307 Sum_probs=21.2
Q ss_pred ccccEEEEEcC-C-cc---------eEeeccc-CCCCcceeeccCC
Q 021432 74 RNVDLVVTVGG-D-GT---------LLQAGHL-IDDSIPVLGVNSD 107 (312)
Q Consensus 74 ~~~Dlvi~lGG-D-GT---------~L~a~~~-~~~~~PilGIN~G 107 (312)
.++|.+|.-|| | ++ ++...+. ...++|+|||-.|
T Consensus 41 ~~~dglilpG~g~~~~~~~~l~~~~~~~~i~~~~~~~~PilGIC~G 86 (201)
T 1gpw_B 41 DLYDLLFIPGVGHFGEGMRRLRENDLIDFVRKHVEDERYVVGVCLG 86 (201)
T ss_dssp SCCSEEEECCCSCSHHHHHHHHHTTCHHHHHHHHHTTCEEEEETHH
T ss_pred cCCCEEEECCCCcHHHHHHHHHhhCHHHHHHHHHHcCCeEEEEChh
Confidence 67899988773 3 11 1222222 2457999999887
No 65
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=21.68 E-value=23 Score=31.94 Aligned_cols=69 Identities=12% Similarity=0.192 Sum_probs=42.1
Q ss_pred cccccEEEEEcCCcceEeecccCCCCcceeeccC-CCCchhHHhhhhhccccccccccchHH---hhhcHHHHHHHHhcC
Q 021432 73 IRNVDLVVTVGGDGTLLQAGHLIDDSIPVLGVNS-DPTRGEEVDMLSNEFDASRSKGYLCAA---TVNNFEQLLDNILEG 148 (312)
Q Consensus 73 ~~~~Dlvi~lGGDGT~L~a~~~~~~~~PilGIN~-G~~~~~~~~~~~~~~~~~~~~GfL~~~---~~~~~~~~l~~l~~g 148 (312)
+..+|++|+=||=||++.+.. .++|++.+-. ....... .+-+. ....|.+..- +++++.+.+.++++.
T Consensus 295 l~~ad~~v~~~G~~t~~Ea~~---~G~P~v~~p~~~~~q~~~----a~~~~-~~g~g~~~~~~~~~~~~l~~~~~~ll~~ 366 (402)
T 3ia7_A 295 LAHARACLTHGTTGAVLEAFA---AGVPLVLVPHFATEAAPS----AERVI-ELGLGSVLRPDQLEPASIREAVERLAAD 366 (402)
T ss_dssp HTTEEEEEECCCHHHHHHHHH---TTCCEEECGGGCGGGHHH----HHHHH-HTTSEEECCGGGCSHHHHHHHHHHHHHC
T ss_pred HhhCCEEEECCCHHHHHHHHH---hCCCEEEeCCCcccHHHH----HHHHH-HcCCEEEccCCCCCHHHHHHHHHHHHcC
Confidence 457899999999999877754 3588887744 3211111 11111 1235555443 567788888888765
Q ss_pred c
Q 021432 149 K 149 (312)
Q Consensus 149 ~ 149 (312)
.
T Consensus 367 ~ 367 (402)
T 3ia7_A 367 S 367 (402)
T ss_dssp H
T ss_pred H
Confidence 3
No 66
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=21.02 E-value=26 Score=32.33 Aligned_cols=67 Identities=18% Similarity=0.162 Sum_probs=43.3
Q ss_pred cccccEEEEEcCCcceEeecccCCCCcceeeccCCCCchhHHhhhhhccccccccccchH---HhhhcHHHHHHHHhcC
Q 021432 73 IRNVDLVVTVGGDGTLLQAGHLIDDSIPVLGVNSDPTRGEEVDMLSNEFDASRSKGYLCA---ATVNNFEQLLDNILEG 148 (312)
Q Consensus 73 ~~~~Dlvi~lGGDGT~L~a~~~~~~~~PilGIN~G~~~~~~~~~~~~~~~~~~~~GfL~~---~~~~~~~~~l~~l~~g 148 (312)
+..+|++|+=||=||++.+... ++|++.+..+.....+...+ .+ ...|...+ .+++++.+++.++ +.
T Consensus 299 l~~~d~~v~~~G~~t~~Ea~~~---G~P~i~~p~~~dQ~~na~~l-~~----~g~g~~~~~~~~~~~~l~~~i~~l-~~ 368 (415)
T 1iir_A 299 FGRVAAVIHHGGAGTTHVAARA---GAPQILLPQMADQPYYAGRV-AE----LGVGVAHDGPIPTFDSLSAALATA-LT 368 (415)
T ss_dssp GGGSSEEEECCCHHHHHHHHHH---TCCEEECCCSTTHHHHHHHH-HH----HTSEEECSSSSCCHHHHHHHHHHH-TS
T ss_pred HhhCCEEEeCCChhHHHHHHHc---CCCEEECCCCCccHHHHHHH-HH----CCCcccCCcCCCCHHHHHHHHHHH-cC
Confidence 4689999999999999888653 58999887753322121111 11 23555543 3567788888888 43
No 67
>4gmk_A Ribose-5-phosphate isomerase A; D-ribose-5-phosphate isomerase family, ribose 5-phosphate isomerisation; 1.72A {Lactobacillus salivarius}
Probab=20.02 E-value=48 Score=29.10 Aligned_cols=20 Identities=20% Similarity=0.356 Sum_probs=17.0
Q ss_pred ccccCCeeeeecccchHHHH
Q 021432 204 NCRSSGLRVSTAAGSSAAML 223 (312)
Q Consensus 204 ~~~gDGviVsTptGSTAY~l 223 (312)
+|--||++|.=.||||++.+
T Consensus 17 ~~V~~gmvvGlGTGSTv~~~ 36 (228)
T 4gmk_A 17 EWIKDGMIVGLGTGSTVKYM 36 (228)
T ss_dssp GGCCTTCEEEECCSHHHHHH
T ss_pred HhCCCCCEEEECchHHHHHH
Confidence 45679999999999999863
Done!