Your job contains 1 sequence.
>021433
MGTLVGHVAPGFAFLALGLWHLLNHIKLHSLRPNSYTSAPWFPTSRIKYLELYMIMLGSF
LSMAMELVIGPEKHQPFDTDGTIPPNHLHNFEHATISLTFFTYAALSIVLDKTCSKLQYG
LTQFLGAIAFGQQFLLFHLHSADHMGVEGQYHLLLQIVVLVSLITTLLGIGYPKSFLVSF
VRSASIFFQGAWFILMGYMLWTPSLIPKGCFINSEEGHQVVRCHGAEALHRAKSLVNLQF
SWFLIGVTIFSVSLYLVLDKFYGDQKVEYSSLTREEDEDSDDVESQKEHKLDESKSFIAM
GKKVFASVDMER
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 021433
(312 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2035746 - symbol:AT1G55230 "AT1G55230" species... 945 5.3e-95 1
TAIR|locus:2035736 - symbol:AT1G55240 "AT1G55240" species... 877 8.6e-88 1
TAIR|locus:2147620 - symbol:AT5G19870 species:3702 "Arabi... 796 3.3e-79 1
TAIR|locus:2010252 - symbol:AT1G49470 "AT1G49470" species... 441 1.4e-41 1
TAIR|locus:2031720 - symbol:AT1G32120 "AT1G32120" species... 343 7.4e-30 1
ZFIN|ZDB-GENE-050522-34 - symbol:zgc:110647 "zgc:110647" ... 183 8.3e-13 1
TAIR|locus:2100237 - symbol:AT3G01360 "AT3G01360" species... 170 9.6e-11 1
UNIPROTKB|Q3T130 - symbol:TMEM45B "Transmembrane protein ... 146 4.9e-08 1
UNIPROTKB|Q96B21 - symbol:TMEM45B "Transmembrane protein ... 138 4.3e-07 1
UNIPROTKB|Q9NWC5 - symbol:TMEM45A "Transmembrane protein ... 132 4.8e-07 2
UNIPROTKB|J3KQ06 - symbol:TMEM45A "Transmembrane protein ... 132 6.4e-07 2
MGI|MGI:1913122 - symbol:Tmem45a "transmembrane protein 4... 128 6.5e-06 1
TAIR|locus:2159043 - symbol:AT5G13890 "AT5G13890" species... 128 8.9e-06 1
ZFIN|ZDB-GENE-040426-1904 - symbol:tmem45b "transmembrane... 119 7.9e-05 1
RGD|1305586 - symbol:Tmem45b "transmembrane protein 45b" ... 118 0.00010 1
MGI|MGI:2384574 - symbol:Tmem45b "transmembrane protein 4... 116 0.00017 1
>TAIR|locus:2035746 [details] [associations]
symbol:AT1G55230 "AT1G55230" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] EMBL:CP002684 GenomeReviews:CT485782_GR
EMBL:AC027034 InterPro:IPR006904 PANTHER:PTHR16007 Pfam:PF04819
HOGENOM:HOG000242848 EMBL:AY630767 EMBL:AY924712 IPI:IPI00517275
PIR:B96594 RefSeq:NP_175919.1 UniGene:At.50799
EnsemblPlants:AT1G55230.1 GeneID:841966 KEGG:ath:AT1G55230
TAIR:At1g55230 eggNOG:NOG260992 InParanoid:Q9C893 OMA:PALIPKG
PhylomeDB:Q9C893 ProtClustDB:CLSN2682644 Genevestigator:Q9C893
Uniprot:Q9C893
Length = 300
Score = 945 (337.7 bits), Expect = 5.3e-95, P = 5.3e-95
Identities = 175/300 (58%), Positives = 219/300 (73%)
Query: 1 MGTLVGHVAPGFAFLALGLWHLLNHIKLHSLRPNSYTSAPWFPTSRIKYLELYMIMLGSF 60
MGTLVGHVAPGFAF ALGLWHL N+IKL L PN++TS+PWFPTS++++LELY+IM+ S
Sbjct: 1 MGTLVGHVAPGFAFFALGLWHLFNNIKLFCLNPNTFTSSPWFPTSKLRHLELYIIMVCSS 60
Query: 61 LSMAMELVIGPEKHQPFDTDGTIPPNHLHNFEHATISLTFFTYAALSIVLD--KTCSKLQ 118
+S+A EL IGP+KHQPFD+DGTIP NHLHNFEH++IS++F YA ++VLD + S +
Sbjct: 61 ISIASELFIGPKKHQPFDSDGTIPSNHLHNFEHSSISMSFLVYAIFAVVLDQERRRSNIS 120
Query: 119 YGLTQFLGAIAFGQQFLLFHLHSADHMGVEGQYHXXXXXXXXXXXXXXXXXXXYPKSFLV 178
+GLT + + AF QQ LFHLHSADHMG+EGQYH PKSFLV
Sbjct: 121 HGLTMLVASSAFAQQLFLFHLHSADHMGIEGQYHKLLQLIIFVSFLTTLIGITLPKSFLV 180
Query: 179 SFVRSASIFFQGAWFILMGYMLWTPSLIPKGCFINSEEGHQVVRCHGAEALHRAKSLVNL 238
SFVRS+SI FQG WF++MGYMLWTPSLIPKGCF++ EEGHQV++C +A+HRAKSLVN+
Sbjct: 181 SFVRSSSITFQGVWFVVMGYMLWTPSLIPKGCFLHEEEGHQVIKCSSDKAIHRAKSLVNI 240
Query: 239 QFSWFLIGVTIFSVSLYLVLDKFYGDQKVEYSSLTRXXXXXXXXXXXQKEHKLDESK-SF 297
+FSWF +G+TIF +SL+L+L YG+ EYS L Q L +SK SF
Sbjct: 241 EFSWFFVGITIFVMSLFLILSGLYGEN-AEYSILVTKDKGEESGEEKQDIESLKKSKPSF 299
>TAIR|locus:2035736 [details] [associations]
symbol:AT1G55240 "AT1G55240" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002684
GenomeReviews:CT485782_GR InterPro:IPR006904 PANTHER:PTHR16007
Pfam:PF04819 HOGENOM:HOG000242848 EMBL:BT011215 EMBL:BT012146
EMBL:AK228776 IPI:IPI00517504 RefSeq:NP_175920.2 UniGene:At.37095
EnsemblPlants:AT1G55240.1 GeneID:841967 KEGG:ath:AT1G55240
TAIR:At1g55240 eggNOG:NOG294557 InParanoid:Q6NM31 OMA:GENVEYS
PhylomeDB:Q6NM31 ProtClustDB:CLSN2918379 Genevestigator:Q6NM31
Uniprot:Q6NM31
Length = 311
Score = 877 (313.8 bits), Expect = 8.6e-88, P = 8.6e-88
Identities = 168/306 (54%), Positives = 209/306 (68%)
Query: 1 MGTLVGHVAPGFAFLALGLWHLLNHIKLHSLRPNSYTSAPWFPTSRIKYLELYMIMLGSF 60
MG+ +GHV PGFAF+ALGLWHL N+IKL L PN+++S+ WFP S++++LELY+IML S
Sbjct: 1 MGSFLGHVLPGFAFVALGLWHLFNNIKLFCLHPNTFSSSTWFPISKLRHLELYLIMLSST 60
Query: 61 LSMAMELVIGPEKHQPFDTDGTIPPNHLHNFEHATISLTFFTYAALSIVLDKTCSKL--Q 118
S++MEL IGP +H PFD DGTIP NHLHNFEH++IS++F YA L++VLD+ +
Sbjct: 61 ASISMELFIGPRRHHPFDVDGTIPSNHLHNFEHSSISMSFLVYAVLALVLDRARPRAAAS 120
Query: 119 YGLTQFLGAIAFGQQFLLFHLHSADHMGVEGQYHXXXXXXXXXXXXXXXXXXXYPKSFLV 178
GLT A AF QQ LLFH HS DHMGVEGQYH PKSFLV
Sbjct: 121 EGLTMLAAAAAFSQQLLLFHFHSTDHMGVEGQYHVILQVVIFVSLLTTIMGIFLPKSFLV 180
Query: 179 SFVRSASIFFQGAWFILMGYMLWTPSLIPKGCFINSEEGHQVVRCHGAEALHRAKSLVNL 238
S VRS+SI FQG W I++G ML+TPSLIPKGC+I+ E H +V+C EALHRAKSLVNL
Sbjct: 181 SLVRSSSIAFQGVWLIVIGCMLYTPSLIPKGCYIHDEGRHIIVKCSTEEALHRAKSLVNL 240
Query: 239 QFSWFLIGVTIFSVSLYLVLDKFYGDQKVEYSSLTRXXXXXXXXXXXQKEHKLDESKSFI 298
+FSW + T+F V+LYL+LD+ YG+ VEYSSLT E K + SF+
Sbjct: 241 EFSWLFVTNTLFVVTLYLILDRVYGEN-VEYSSLTTNNQTYQDDEEQHFESKSTQKTSFV 299
Query: 299 AMGKKV 304
MGK V
Sbjct: 300 QMGKLV 305
>TAIR|locus:2147620 [details] [associations]
symbol:AT5G19870 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] [GO:0010413 "glucuronoxylan
metabolic process" evidence=RCA] [GO:0045492 "xylan biosynthetic
process" evidence=RCA] EMBL:CP002688 GenomeReviews:BA000015_GR
InterPro:IPR006904 PANTHER:PTHR16007 Pfam:PF04819 EMBL:BT015328
EMBL:BT015639 IPI:IPI00533378 RefSeq:NP_197487.1 UniGene:At.31244
EnsemblPlants:AT5G19870.1 GeneID:832108 KEGG:ath:AT5G19870
TAIR:At5g19870 eggNOG:NOG307773 HOGENOM:HOG000242848
InParanoid:Q66GS4 OMA:IITIFAM PhylomeDB:Q66GS4
ProtClustDB:CLSN2916683 Genevestigator:Q66GS4 Uniprot:Q66GS4
Length = 276
Score = 796 (285.3 bits), Expect = 3.3e-79, P = 3.3e-79
Identities = 148/273 (54%), Positives = 184/273 (67%)
Query: 1 MGTLVGHVAPGFAFLALGLWHLLNHIKLHSLRPNSYTSAPWFPTSRIKYLELYMIMLGSF 60
MGTLVGH+ PGF F ALGLWHL NHIK+ SL P SY + WFP S+ +YLE +I++ S
Sbjct: 1 MGTLVGHILPGFFFFALGLWHLFNHIKIFSLHPKSYIAPLWFPLSKPRYLEPLVIIIASS 60
Query: 61 LSMAMELVIGPEKHQPFD-TDGTIPPNHLHNFEHATISLTFFTYAALSIVLDKTCSKLQY 119
LS+++EL +G + HQPFD DGTIP NHLHNFEH+ IS TF TYAA +IV DKT
Sbjct: 61 LSISVELFLGQKNHQPFDPNDGTIPSNHLHNFEHSCISFTFITYAAFAIVFDKTRPIAHR 120
Query: 120 GLTQFLGAIAFGQQFLLFHLHSADHMGVEGQYHXXXXXXXXXXXXXXXXXXXYPKSFLVS 179
L + A+AF QQ LFH HS+DH GVEG YH P SF++S
Sbjct: 121 SLINLIAALAFAQQLFLFHFHSSDHTGVEGHYHLLLQLVVFVSLVTTLLGIALPSSFILS 180
Query: 180 FVRSASIFFQGAWFILMGYMLWTPSLIPKGCFINSEEGHQVVRCHGAEALHRAKSLVNLQ 239
FVRS S+ FQG W + M MLWTPSL+PK CF++ EEG +RC +ALHRA SLVN+Q
Sbjct: 181 FVRSLSVSFQGIWLMSMACMLWTPSLVPKDCFLHIEEGKHTIRCSDVKALHRAISLVNIQ 240
Query: 240 FSWFLIGVTIFSVSLYLVLDKFYGDQKVEYSSL 272
FSWFL+ +TIF++ Y+ L + YG+ K+EYS L
Sbjct: 241 FSWFLVIITIFAMWFYIFLQRIYGE-KIEYSQL 272
>TAIR|locus:2010252 [details] [associations]
symbol:AT1G49470 "AT1G49470" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002684 EMBL:AC007504
InterPro:IPR006904 PANTHER:PTHR16007 Pfam:PF04819 EMBL:BT025653
IPI:IPI00544125 PIR:C96531 RefSeq:NP_564546.1 UniGene:At.38225
STRING:Q9XIB3 PRIDE:Q9XIB3 EnsemblPlants:AT1G49470.1 GeneID:841370
KEGG:ath:AT1G49470 TAIR:At1g49470 InParanoid:Q9XIB3 OMA:ANLQFSW
PhylomeDB:Q9XIB3 ProtClustDB:CLSN2917202 Genevestigator:Q9XIB3
Uniprot:Q9XIB3
Length = 302
Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 97/268 (36%), Positives = 140/268 (52%)
Query: 1 MGTLVGHVAPGFAFLALGLWHLLNHIKLHSLR-PNSYTSAPWFPTSRIKYLELYMIMLGS 59
MGT +GH PG + LGLWHL N I+ + L+ P ++++ WFP ++K+LEL +I+ S
Sbjct: 1 MGTFLGHFVPGLSLALLGLWHLFNTIRSYCLKGPEAFSAKFWFPFPKLKHLELILILFFS 60
Query: 60 FLSMAMELVIGPEKHQPFDTDGTIPPNHLHNFEHATISLTFFTYAALSIVLDKT-CSKLQ 118
FLS+ + + P F+ ++ P+ N EHA++ L +A ++ + T CS L
Sbjct: 61 FLSITLLTLDFPN----FNFS-SLKPD---NLEHASMFLHLIIFACFALFCELTLCSDLF 112
Query: 119 YGLTQFLGAIAFGQQFLLFHLHSADHMGVEGQYHXXXXXXXXXXXXXXXXXXXYPKSFLV 178
GL L A F Q+ L H HS DH G+EG YH +PKSF
Sbjct: 113 SGLIGVLSASVFAQELFLLHFHSTDHSGLEGHYHFLLQLIAFVSFSSALASASFPKSFSA 172
Query: 179 SFVRSASIFFQGAWFILMGYMLWTPSLIPKGCFIN---SEEGHQ-------VVRCHGAEA 228
+ S+ FQG WF+ MG+MLW P +P+GC N S + ++ V C A
Sbjct: 173 ALFLPISVMFQGCWFLNMGFMLWIPEYVPRGCVSNMSTSTDNNRRSVYHSGAVACESPGA 232
Query: 229 LHRAKSLVNLQFSWFLIGVTIFSVSLYL 256
RAK+L NLQFSW L + I + +L L
Sbjct: 233 EIRAKALANLQFSWMLSAILIITCALCL 260
>TAIR|locus:2031720 [details] [associations]
symbol:AT1G32120 "AT1G32120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=IDA] EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0016020 EMBL:AC084165
InterPro:IPR006904 PANTHER:PTHR16007 Pfam:PF04819 eggNOG:NOG80677
InterPro:IPR019557 Pfam:PF10536 IPI:IPI00542637 PIR:E86445
RefSeq:NP_174491.1 UniGene:At.40210 ProteinModelPortal:Q9FVQ7
PRIDE:Q9FVQ7 EnsemblPlants:AT1G32120.1 GeneID:840104
KEGG:ath:AT1G32120 TAIR:At1g32120 InParanoid:Q9FVQ7
Genevestigator:Q9FVQ7 Uniprot:Q9FVQ7
Length = 1206
Score = 343 (125.8 bits), Expect = 7.4e-30, P = 7.4e-30
Identities = 78/268 (29%), Positives = 127/268 (47%)
Query: 1 MGTLVGHVAPGFAFLALGLWHLLNHIKLHSLRPNSYTSAPWFPT----SRIKYLELYMIM 56
MG+ GH PG FL +G+WH+ + + + P+S+ W P RIKYLELY++
Sbjct: 943 MGSFKGHALPGTLFLVVGVWHIWSSVVRYISNPSSFRVRVWHPVPGFNDRIKYLELYVVT 1002
Query: 57 LGSFLSMAMELVIGPEKHQPFDTDGTIPPNHLHNFEHATISLTFFTYAALSIVLDKT-CS 115
+GSF+ + +E + H F +G + P+H+++FEH+ + L FF ++++ +KT
Sbjct: 1003 IGSFIDLCIEFLYST--HLKFFVNGVLNPSHMNDFEHSGMLLMFFILGFIALLSEKTRLL 1060
Query: 116 KLQYGLTQFLGAIAFGQQFLLFHLHSADHMGVEGQYHXXXXXXXXXXXXXXXXXXXYPKS 175
L + A AF + LLF HS H G+EG YH P S
Sbjct: 1061 PLPQEALCLIAATAFTAECLLFFFHSTSHKGLEGYYHLLLVFLIGLCVISSIAGAICPTS 1120
Query: 176 FLVSFVRSASIFFQGAWFILMGYMLWTPSLIPKGCFINSEEGHQVVRCHGAEALHRAKSL 235
F V ++ QG WF + L+ P ++P+GC + + VV C ++ + L
Sbjct: 1121 FPVDLCNGIAMTLQGLWFYQTAFTLYGP-MMPQGCSLKQ---NSVV-CRSVDSEVSGEFL 1175
Query: 236 VNLQFSWFLIGVTIFSVSLYLVLDKFYG 263
N Q ++ V + V Y+ +G
Sbjct: 1176 ANFQLFSLVLAVLVCVVGSYVFAASRFG 1203
>ZFIN|ZDB-GENE-050522-34 [details] [associations]
symbol:zgc:110647 "zgc:110647" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] ZFIN:ZDB-GENE-050522-34 InterPro:IPR006904
PANTHER:PTHR16007 Pfam:PF04819 eggNOG:NOG80677 HOGENOM:HOG000136727
HOVERGEN:HBG008722 OrthoDB:EOG4ZKJN1 GeneTree:ENSGT00530000063088
EMBL:BX004839 EMBL:BC095347 IPI:IPI00498127 RefSeq:NP_001018453.1
UniGene:Dr.77550 STRING:Q503F7 Ensembl:ENSDART00000104157
GeneID:553643 KEGG:dre:553643 InParanoid:Q503F7 OMA:MLDVHVH
NextBio:20880377 Uniprot:Q503F7
Length = 277
Score = 183 (69.5 bits), Expect = 8.3e-13, P = 8.3e-13
Identities = 60/213 (28%), Positives = 95/213 (44%)
Query: 1 MGTLVGHVAPGFAFLALGLWHLLNHIKLHSLRPNSYTSAPWFPTS----RIKYLELYMIM 56
MG+ GH PG FL GLW L++ R N A + RI+ +E +I+
Sbjct: 1 MGSFKGHALPGSFFLITGLWWAAKQTFLYATRRNKSAGAGRLASRALQRRIEIIEGAVIL 60
Query: 57 LGSFLSM-AMELVIGPEKHQPFDTDGTIPPNHLHNFEHATISLTFFTYAALSIVLDKTCS 115
S + M A +L+ G K Q +D+ T L N++H T+ L F A+S+ + T
Sbjct: 61 SFSIIGMLAEQLLAGGPKFQLYDSS-TQHWEQLMNWQHTTMYLFFAISGAISLTVHST-D 118
Query: 116 KLQYGLTQFLGAIAF-GQQFL-LFHLHSADHMGVEGQYHXXXXXXXXXXXXXXXXXXXYP 173
L + L A+AF + FL L+HLH + V H +
Sbjct: 119 IAPIALDRMLLALAFFNEGFLFLYHLHGRGMLDVH--VHTLLLYAIFGQAFICLLEVFHR 176
Query: 174 KSFLVSFVRSASIFFQGAWFILMGYMLWTPSLI 206
+ L+ +R+ QG+WF +G++L+ PS +
Sbjct: 177 GNILLELLRATLTVLQGSWFWQIGFVLYPPSQV 209
>TAIR|locus:2100237 [details] [associations]
symbol:AT3G01360 "AT3G01360" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND]
EMBL:CP002686 EMBL:AC010676 InterPro:IPR006904 PANTHER:PTHR16007
Pfam:PF04819 EMBL:BT011731 EMBL:AK229512 IPI:IPI00520879
RefSeq:NP_001030617.1 RefSeq:NP_186785.1 UniGene:At.41288
EnsemblPlants:AT3G01360.1 EnsemblPlants:AT3G01360.2 GeneID:821158
KEGG:ath:AT3G01360 TAIR:At3g01360 HOGENOM:HOG000077720
InParanoid:Q9SRI3 OMA:TIKCRTH PhylomeDB:Q9SRI3
ProtClustDB:CLSN2684993 ArrayExpress:Q9SRI3 Genevestigator:Q9SRI3
Uniprot:Q9SRI3
Length = 319
Score = 170 (64.9 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 66/280 (23%), Positives = 114/280 (40%)
Query: 1 MGTLVGHVAPGFAFLALGLWHLLNHIKLHSLRPNSY--TSAPWFPTSRIKYLELYMIMLG 58
MG L VA G F +G W L+ +L PNS T+ P ++I+ +
Sbjct: 1 MGILSYAVAGG-GFAVIGAWESLDS---SNLDPNSSSGTADSSSPMAQIRASPPKSVGSS 56
Query: 59 SF-LSMAMELVIGPEKHQPFDTDGTIPP-NHLHNFEHATISLTFFTYAALSIVLDKTCS- 115
S +++ L I F + G+ + + +++ F YA L+ +++ +
Sbjct: 57 SIPVALLSSLFIANSFFSFFSSIGSRDRVGSMIQLQIVAVAVLFLYYAILTYLVNSKNAV 116
Query: 116 --KLQYGLTQFLGAIAFGQQFLLFHLHSADHMGVEGQYHXXXXXXXXXXXXXXXXXXXYP 173
L +T L F ++FL+F+L D G+E +Y+
Sbjct: 117 FVALPSSITTLLLLFGFIEEFLMFYLQKKDVSGIENRYYDLMLVPIAICVFSTVFELKSD 176
Query: 174 KSF--LVSFVRSASIFFQGAWFILMGYMLWTPSLIPKGC-FINSEEGHQVVRCHGAEALH 230
S R + QG WF+ MG +T LI C F G+ ++C G H
Sbjct: 177 SSTHRFAKLGRGIGLILQGTWFLQMGVSFFT-GLITNNCTFHEKSRGNFTIKCKGHGDYH 235
Query: 231 RAKSLVNLQFSWFLIGVTIFSVSLYLVLDKFYGDQKVEYS 270
RAK++ LQF+ L + + + L+ V+ G + ++S
Sbjct: 236 RAKAIATLQFNCHLALMVVVATGLFSVIANKNGYLRQDHS 275
>UNIPROTKB|Q3T130 [details] [associations]
symbol:TMEM45B "Transmembrane protein 45B" species:9913
"Bos taurus" [GO:0016021 "integral to membrane" evidence=IEA]
GO:GO:0016021 InterPro:IPR006904 PANTHER:PTHR16007 Pfam:PF04819
eggNOG:NOG80677 HOGENOM:HOG000136727 HOVERGEN:HBG008722
EMBL:BC102148 IPI:IPI00696641 RefSeq:NP_001029547.1
UniGene:Bt.36289 Ensembl:ENSBTAT00000023404 GeneID:510305
KEGG:bta:510305 CTD:120224 GeneTree:ENSGT00530000063088
InParanoid:Q3T130 OMA:LMFITMC OrthoDB:EOG412M6D NextBio:20869369
Uniprot:Q3T130
Length = 276
Score = 146 (56.5 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 46/206 (22%), Positives = 88/206 (42%)
Query: 1 MGTLVGHVAPGFAFLALGLWHLLNH-IKLHSLRPNSYTSAPWFPTSRIKYLELYMIMLGS 59
M GH PG FL +GLW L + +K + S + R++ +E + L +
Sbjct: 1 MANFKGHALPGSFFLIVGLWWSLKYPLKYFYQKEKSNQLTHHY--QRLEIIEAAIRTLFA 58
Query: 60 FLSMAMELVI--GPEKHQPFDTDGTIPPNHLHNFEHATISLTFFTYAALSIVLDKTCSKL 117
+ + +E + GP H + D + L N++H+T+ L FF + + +L + +
Sbjct: 59 VIGILVEQFVPDGPHLHL-YHEDHWVK---LMNWQHSTMYL-FFAVSGIMDMLTYLITHV 113
Query: 118 QYGLTQFLGAIAFGQQFLLFHLHSADHMGVEGQYHXXXXXXXXXXXXXXXXXXXYPKSFL 177
GL + + A+A + LF+ H D ++ H + +
Sbjct: 114 PLGLDRLVMALAAFNEGFLFYYHVRDRPPLDQHIHSLLLYTVFGGALSLAVEVVLRDNIV 173
Query: 178 VSFVRSASIFFQGAWFILMGYMLWTP 203
+ R++ + QG WF +G++L+ P
Sbjct: 174 LELFRTSLLLLQGTWFWQIGFVLFPP 199
>UNIPROTKB|Q96B21 [details] [associations]
symbol:TMEM45B "Transmembrane protein 45B" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
GO:GO:0016021 InterPro:IPR006904 PANTHER:PTHR16007 Pfam:PF04819
eggNOG:NOG80677 HOGENOM:HOG000136727 HOVERGEN:HBG008722 CTD:120224
OMA:LMFITMC OrthoDB:EOG412M6D EMBL:AK098106 EMBL:AK290283
EMBL:AK292058 EMBL:BC016153 IPI:IPI00059683 RefSeq:NP_620143.1
UniGene:Hs.504301 ProteinModelPortal:Q96B21 IntAct:Q96B21
PhosphoSite:Q96B21 DMDM:74731190 PRIDE:Q96B21 DNASU:120224
Ensembl:ENST00000281441 Ensembl:ENST00000524567 GeneID:120224
KEGG:hsa:120224 UCSC:uc001qfe.1 GeneCards:GC11P129688
HGNC:HGNC:25194 HPA:HPA015878 neXtProt:NX_Q96B21
PharmGKB:PA134909603 InParanoid:Q96B21 PhylomeDB:Q96B21
GenomeRNAi:120224 NextBio:80545 Bgee:Q96B21 CleanEx:HS_TMEM45B
Genevestigator:Q96B21 Uniprot:Q96B21
Length = 275
Score = 138 (53.6 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 51/212 (24%), Positives = 89/212 (41%)
Query: 1 MGTLVGHVAPGFAFLALGL-WHLLNHIKLHS-LRPNSYTSAPWFPTSRIKYLELYMIMLG 58
M GH PG FL +GL W + +K S R NS P R++ +E + L
Sbjct: 1 MANFKGHALPGSFFLIIGLCWSVKYPLKYFSHTRKNS----PLHYYQRLEIVEAAIRTLF 56
Query: 59 SFLSMAMELVI--GPEKHQPFDTDGTIPPNHLHNFEHATISLTFFTYAALSIVLDKTCSK 116
S + E + GP H + + I L N++H+T+ L FF + + +L S
Sbjct: 57 SVTGILAEQFVPDGPHLHL-YHENHWIK---LMNWQHSTMYL-FFAVSGIVDMLTYLVSH 111
Query: 117 LQYGLTQFLGAIAFGQQFLLFHLHSADHMGVEGQYHXXXXXXXXXXXXXXXXXXXYPKSF 176
+ G+ + + A+A + LF+ H + ++ H +
Sbjct: 112 VPLGVDRLVMAVAVFMEGFLFYYHVHNRPPLDQHIHSLLLYALFGGCVSISLEVIFRDHI 171
Query: 177 LVSFVRSASIFFQGAWFILMGYMLWTPSLIPK 208
++ R++ I QG WF +G++L+ P P+
Sbjct: 172 VLELFRTSLIILQGTWFWQIGFVLFPPFGTPE 203
>UNIPROTKB|Q9NWC5 [details] [associations]
symbol:TMEM45A "Transmembrane protein 45A" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
GO:GO:0016021 InterPro:IPR006904 PANTHER:PTHR16007 Pfam:PF04819
EMBL:AB013911 EMBL:AY450392 EMBL:AK000996 EMBL:BC040355
IPI:IPI00017523 RefSeq:NP_060474.1 UniGene:Hs.658956
ProteinModelPortal:Q9NWC5 STRING:Q9NWC5 PhosphoSite:Q9NWC5
DMDM:28380044 PRIDE:Q9NWC5 DNASU:55076 Ensembl:ENST00000323523
GeneID:55076 KEGG:hsa:55076 UCSC:uc003dtz.1 CTD:55076
GeneCards:GC03P100211 HGNC:HGNC:25480 HPA:HPA024082
neXtProt:NX_Q9NWC5 PharmGKB:PA134868262 eggNOG:NOG80677
HOGENOM:HOG000136727 HOVERGEN:HBG008722 InParanoid:Q9NWC5
OrthoDB:EOG4ZKJN1 PhylomeDB:Q9NWC5 ChiTaRS:TMEM45A GenomeRNAi:55076
NextBio:58614 ArrayExpress:Q9NWC5 Bgee:Q9NWC5 CleanEx:HS_TMEM45A
Genevestigator:Q9NWC5 GermOnline:ENSG00000181458 Uniprot:Q9NWC5
Length = 275
Score = 132 (51.5 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 54/210 (25%), Positives = 85/210 (40%)
Query: 1 MGTLVGHVAPGFAFLALGLWHLLNHIKLHSLRPNSYTSAPWFPTS--RIKYLELYMIMLG 58
MG GH PG F +GLW I + + T T R++ LE I+
Sbjct: 1 MGNFRGHALPGTFFFIIGLWWCTKSILKYICKKQKRTCYLGSKTLFYRLEILEGITIVGM 60
Query: 59 SFLSMAMELVIGPEKH-QPFD-TDGTIPPNHLHNFEHATISLTFFTYAALSIVLDKTCSK 116
+ MA E I H +D G N L + H T+ FF ++ +L T S
Sbjct: 61 ALTGMAGEQFIPGGPHLMLYDYKQGHW--NQLLGWHHFTMYF-FFGLLGVADILCFTISS 117
Query: 117 LQYGLTQFLGAIA-FGQQFLLF-HLHSADHMGVEGQYHXXXXXXXXXXXXXXXXXXXYPK 174
L LT+ + + A F + F+ + H H + + + H
Sbjct: 118 LPVSLTKLMLSNALFVEAFIFYNHTHGREMLDIF--VHQLLVLVVFLTGLVAFLEFLVRN 175
Query: 175 SFLVSFVRSASIFFQGAWFILMGYMLWTPS 204
+ L+ +RS+ I QG+WF +G++L+ PS
Sbjct: 176 NVLLELLRSSLILLQGSWFFQIGFVLYPPS 205
Score = 41 (19.5 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 234 SLVNLQFSWFL-IGVTIFSVS 253
SL+ LQ SWF IG ++ S
Sbjct: 185 SLILLQGSWFFQIGFVLYPPS 205
>UNIPROTKB|J3KQ06 [details] [associations]
symbol:TMEM45A "Transmembrane protein 45A, isoform CRA_a"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] GO:GO:0016021 EMBL:CH471052 InterPro:IPR006904
PANTHER:PTHR16007 Pfam:PF04819 UniGene:Hs.658956 HGNC:HGNC:25480
ChiTaRS:TMEM45A EMBL:AC128693 ProteinModelPortal:J3KQ06
Ensembl:ENST00000403410 OMA:FCWHYAL Uniprot:J3KQ06
Length = 291
Score = 132 (51.5 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 54/210 (25%), Positives = 85/210 (40%)
Query: 1 MGTLVGHVAPGFAFLALGLWHLLNHIKLHSLRPNSYTSAPWFPTS--RIKYLELYMIMLG 58
MG GH PG F +GLW I + + T T R++ LE I+
Sbjct: 17 MGNFRGHALPGTFFFIIGLWWCTKSILKYICKKQKRTCYLGSKTLFYRLEILEGITIVGM 76
Query: 59 SFLSMAMELVIGPEKH-QPFD-TDGTIPPNHLHNFEHATISLTFFTYAALSIVLDKTCSK 116
+ MA E I H +D G N L + H T+ FF ++ +L T S
Sbjct: 77 ALTGMAGEQFIPGGPHLMLYDYKQGHW--NQLLGWHHFTMYF-FFGLLGVADILCFTISS 133
Query: 117 LQYGLTQFLGAIA-FGQQFLLF-HLHSADHMGVEGQYHXXXXXXXXXXXXXXXXXXXYPK 174
L LT+ + + A F + F+ + H H + + + H
Sbjct: 134 LPVSLTKLMLSNALFVEAFIFYNHTHGREMLDIF--VHQLLVLVVFLTGLVAFLEFLVRN 191
Query: 175 SFLVSFVRSASIFFQGAWFILMGYMLWTPS 204
+ L+ +RS+ I QG+WF +G++L+ PS
Sbjct: 192 NVLLELLRSSLILLQGSWFFQIGFVLYPPS 221
Score = 41 (19.5 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 234 SLVNLQFSWFL-IGVTIFSVS 253
SL+ LQ SWF IG ++ S
Sbjct: 201 SLILLQGSWFFQIGFVLYPPS 221
>MGI|MGI:1913122 [details] [associations]
symbol:Tmem45a "transmembrane protein 45a" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005887 "integral to plasma membrane" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
MGI:MGI:1913122 GO:GO:0005887 InterPro:IPR006904 PANTHER:PTHR16007
Pfam:PF04819 eggNOG:NOG80677 HOGENOM:HOG000136727
HOVERGEN:HBG008722 OrthoDB:EOG4ZKJN1 EMBL:M32486 IPI:IPI00120301
PIR:I49441 UniGene:Mm.262328 STRING:Q60774 PhosphoSite:Q60774
PRIDE:Q60774 InParanoid:Q60774 CleanEx:MM_TMEM45A
Genevestigator:Q60774 GermOnline:ENSMUSG00000022754 Uniprot:Q60774
Length = 273
Score = 128 (50.1 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 44/206 (21%), Positives = 85/206 (41%)
Query: 1 MGTLVGHVAPGFAFLALGLWHLLNHIKLHSLRPNSYTSAPWFPTSRIKYLELY---MIML 57
MG+ GH PG F A+G W + +I L S+ + + ++ E++ +++L
Sbjct: 1 MGSFKGHALPGSFFFAMGFWWTMKNI-LKSVYKRQTRTCYLNSKTLLRRTEIWEGVVVLL 59
Query: 58 GSFLSMAMELVIGPEKHQPFDTDGTIPPNHLHNFEHATISLTFFTYAALSIVLDKTCSKL 117
S +A E I DG N + + H T+ L FF ++ ++ T + L
Sbjct: 60 MSLTGIAGEQFISGGPALILHKDGQW--NQILGWHHTTMYL-FFGLQGITQIICFTTNVL 116
Query: 118 QYGLTQFLGAIAFGQQFLLFHLHSADHMGVEGQYHXXXXXXXXXXXXXXXXXXXYPKSFL 177
++ + +IA + +F+ H+ ++ H + L
Sbjct: 117 PLSSSKLMLSIAIFVETFMFYNHTHGREMIDIFVHQLLVFVGTFSGLVAFLEFLVKNNAL 176
Query: 178 VSFVRSASIFFQGAWFILMGYMLWTP 203
+ +R + + FQG WF M ++L+ P
Sbjct: 177 LELLRCSLLMFQGTWFWQMAFVLYPP 202
>TAIR|locus:2159043 [details] [associations]
symbol:AT5G13890 "AT5G13890" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002688 EMBL:AB005230 InterPro:IPR006904
Pfam:PF04819 EMBL:BT025873 EMBL:AK175246 IPI:IPI00547808
RefSeq:NP_196893.1 RefSeq:NP_850816.1 RefSeq:NP_850817.1
UniGene:At.27778 PRIDE:Q9FFY4 EnsemblPlants:AT5G13890.1
EnsemblPlants:AT5G13890.2 EnsemblPlants:AT5G13890.3 GeneID:831236
KEGG:ath:AT5G13890 TAIR:At5g13890 InParanoid:Q9FFY4 OMA:SNHIQMK
PhylomeDB:Q9FFY4 ProtClustDB:CLSN2687054 ArrayExpress:Q9FFY4
Genevestigator:Q9FFY4 Uniprot:Q9FFY4
Length = 310
Score = 128 (50.1 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 66/296 (22%), Positives = 121/296 (40%)
Query: 1 MGTLVGHVAPGFAFLALGLWHLLNHIKLHSLR-PNSYTSAPWFPT--------------S 45
MG ++ + + L LGL+HL+ H L+ P SY + P++P +
Sbjct: 1 MGEMMYKLFASASLLTLGLYHLICTF-FHLLKSPQSYAAKPFYPFPRLSSVTGNNHHNHN 59
Query: 46 RIKYLELYMIMLGSFLSMAMELVIGPEKHQPFDTDGTIPPNHLHNFEHATISLTFFTYAA 105
R++ L L++++L F++ E +I P G+ P + + A + F A
Sbjct: 60 RLQNLPLFILILSLFVAFLHETLISFYS-DPL-VKGSTPVHRFSSLNSAAVFFLFLIIAI 117
Query: 106 LSIVLDKTCS-KLQYGLTQFLGAIAFGQQFLLFHL--HSADHMGVEGQYHXXXXXXXXXX 162
++ D T L L L ++ F FL + SA + Q H
Sbjct: 118 YYLLSDSTSLIPLPSDLLFALASVGF---FLHYSAASSSAAIQTSDLQAHCDSLSARISA 174
Query: 163 XXXXXXXXXYPKS--FLVSFVRSASIFFQGAWFILMGYMLWTPSLIPKGC--FINSEEGH 218
+S F+ +A+I QG W + G L+ IP+GC ++ + G
Sbjct: 175 LCSLLCLLLACRSRLFIADAALAAAICLQGLWQLQTGLSLYVDGFIPEGCHRLLDVQSGV 234
Query: 219 Q-VVRCHGAEALHRAKSLVNLQFSWFLIGVTIFSVSLYLVLDKFYGDQKV-EYSSL 272
+ +C ++ RA S+++L F+ ++ V I Y ++ G ++ Y +L
Sbjct: 235 EGSTQCDIQDSKLRAVSILDLMFTVHVVLVVILIFVTYTMVVMAAGVRRTGSYEAL 290
>ZFIN|ZDB-GENE-040426-1904 [details] [associations]
symbol:tmem45b "transmembrane protein 45B"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] ZFIN:ZDB-GENE-040426-1904 GO:GO:0016021
InterPro:IPR006904 PANTHER:PTHR16007 Pfam:PF04819 eggNOG:NOG80677
HOGENOM:HOG000136727 HOVERGEN:HBG008722 CTD:120224 OMA:LMFITMC
OrthoDB:EOG412M6D EMBL:BC065467 IPI:IPI00511256 RefSeq:NP_991240.1
UniGene:Dr.84314 GeneID:402977 KEGG:dre:402977 InParanoid:Q6P0S3
NextBio:20816785 Uniprot:Q6P0S3
Length = 283
Score = 119 (46.9 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 46/209 (22%), Positives = 82/209 (39%)
Query: 1 MGTLVGHVAPGFAFLALGLWHLLN----HIKLHSLRPNSYTSAPWFPT--SRIKYLELYM 54
M GH PG FL GLW + I R +RI +E +
Sbjct: 1 MANFKGHALPGTFFLLFGLWWSIKCPFRQILRRKERQVGDRERQKLTALFNRIDLIEGSL 60
Query: 55 IMLGSFLSMAMELVIGPEKHQPFDTDGTIPPNHLHNFEHATISLTFFTYAALSIVLDKTC 114
+ +F+ + E + H DG + L N++H+T+ L F+ + ++ VL +
Sbjct: 61 KIFFAFVGIMAEQFVPDGPHAHLYQDGWVK---LMNWQHSTMYL-FYGISGIADVLSVSS 116
Query: 115 SKLQYGLTQ-FLGAIAFGQQFLL-FHLHSADHMGVEGQYHXXXXXXXXXXXXXXXXXXXY 172
+ GL + FL F + FL FH+H+ + + + H
Sbjct: 117 HHVPVGLDRLFLSLALFVEGFLFYFHIHNREPL--DQHIHSLLLFAVFGGSASTMMEVFK 174
Query: 173 PKSFLVSFVRSASIFFQGAWFILMGYMLW 201
++ ++ +R QG WF +G++L+
Sbjct: 175 RENAVLELLRCTLAILQGTWFYQIGFVLY 203
>RGD|1305586 [details] [associations]
symbol:Tmem45b "transmembrane protein 45b" species:10116 "Rattus
norvegicus" [GO:0016021 "integral to membrane" evidence=IEA]
RGD:1305586 GO:GO:0016021 InterPro:IPR006904 PANTHER:PTHR16007
Pfam:PF04819 eggNOG:NOG80677 HOGENOM:HOG000136727
HOVERGEN:HBG008722 CTD:120224 GeneTree:ENSGT00530000063088
OMA:LMFITMC OrthoDB:EOG412M6D EMBL:BC100635 IPI:IPI00368981
RefSeq:NP_001028239.1 UniGene:Rn.42073 PhosphoSite:Q497B2
PRIDE:Q497B2 Ensembl:ENSRNOT00000011329 GeneID:315524
KEGG:rno:315524 UCSC:RGD:1305586 InParanoid:Q497B2 NextBio:669371
Genevestigator:Q497B2 Uniprot:Q497B2
Length = 278
Score = 118 (46.6 bits), Expect = 0.00010, P = 0.00010
Identities = 45/214 (21%), Positives = 83/214 (38%)
Query: 1 MGTLVGHVAPGFAFLALGLW----HLLNHIKLHSLRPNSYTSAPWFPTSRIKYLELYMIM 56
M GH PG FL GLW + L + L+ N + RI+ +E +
Sbjct: 1 MANFKGHALPGSFFLIFGLWWSVKYPLKYFHQKGLKKNRLS----LQQQRIEIIEGAVKA 56
Query: 57 LGSFLSMAMELVI--GPEKHQPFDTDGTIPPNHLHNFEHATISLTFFTYAALSIVLDKTC 114
L + + + E + GP H + T L N++H+T+ L F + ++
Sbjct: 57 LFAVIGILAEQFVPDGPHLHLYHENQWT----KLMNWQHSTMYLFFGVSGIIDMLTYLYF 112
Query: 115 SKLQYGLTQFLGAIAFGQQFLLFHLHSADHMGVEGQYHXXXXXXXXXXXXXXXXXXXYPK 174
+ + GL + + A+A + LF+ H ++ H
Sbjct: 113 NIVPLGLDRVVLAMAVFVEGFLFYFHVHGRPPLDQHIHSLLLFSLFGATISICLEVILRD 172
Query: 175 SFLVSFVRSASIFFQGAWFILMGYMLWTPSLIPK 208
+ ++ R+ + QG WF +G++L+ P P+
Sbjct: 173 NIVLELFRTTLLILQGTWFWQIGFVLFPPFGTPE 206
>MGI|MGI:2384574 [details] [associations]
symbol:Tmem45b "transmembrane protein 45b" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
MGI:MGI:2384574 GO:GO:0016021 InterPro:IPR006904 PANTHER:PTHR16007
Pfam:PF04819 eggNOG:NOG80677 HOGENOM:HOG000136727
HOVERGEN:HBG008722 CTD:120224 GeneTree:ENSGT00530000063088
OMA:LMFITMC OrthoDB:EOG412M6D EMBL:AK144325 EMBL:BC018222
EMBL:BC026654 IPI:IPI00122770 RefSeq:NP_659185.1 UniGene:Mm.390134
ProteinModelPortal:Q8VCZ2 PhosphoSite:Q8VCZ2 PRIDE:Q8VCZ2
Ensembl:ENSMUST00000048050 GeneID:235135 KEGG:mmu:235135
UCSC:uc009ort.1 InParanoid:Q8VCZ2 NextBio:382528 Bgee:Q8VCZ2
CleanEx:MM_TMEM45B Genevestigator:Q8VCZ2 Uniprot:Q8VCZ2
Length = 278
Score = 116 (45.9 bits), Expect = 0.00017, P = 0.00017
Identities = 44/208 (21%), Positives = 83/208 (39%)
Query: 1 MGTLVGHVAPGFAFLALGLWHLLNH-IKL--HSLRPNSYTSAPWFPTSRIKYLELYMIML 57
M GH PG FL +GLW + + +K H N+ S RI+ +E + L
Sbjct: 1 MANFKGHALPGSFFLIVGLWWSVKYPLKYFHHKGLKNNRLSRQ---QERIEIIEGAVKTL 57
Query: 58 GSFLSMAMELVI--GPEKHQPFDTDGTIPPNHLHNFEHATISLTFFTYAALSIVLDKTCS 115
+ + + E + GP H + L N++H+T+ L F + ++
Sbjct: 58 FAIIGILAEQFVPDGPHLHLYHENQWV----KLMNWQHSTMYLFFGVSGLMDMITYLYFH 113
Query: 116 KLQYGLTQFLGAIAFGQQFLLFHLHSADHMGVEGQYHXXXXXXXXXXXXXXXXXXXYPKS 175
+ GL + + A+A + LF+ H + ++ H +
Sbjct: 114 IVPLGLDRVVLAMAVFIEGFLFYFHVHNRPPLDQHIHSLLLFGLFGAAVSISLEVILRDN 173
Query: 176 FLVSFVRSASIFFQGAWFILMGYMLWTP 203
++ R++ + QG WF +G++L+ P
Sbjct: 174 IVLELFRTSLLILQGTWFWQIGFVLFPP 201
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.326 0.139 0.436 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 312 282 0.00083 115 3 11 22 0.41 33
33 0.42 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 612 (65 KB)
Total size of DFA: 209 KB (2116 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.40u 0.09s 20.49t Elapsed: 00:00:01
Total cpu time: 20.40u 0.09s 20.49t Elapsed: 00:00:01
Start: Mon May 20 19:59:06 2013 End: Mon May 20 19:59:07 2013