Query 021433
Match_columns 312
No_of_seqs 151 out of 291
Neff 6.1
Searched_HMMs 13730
Date Mon Mar 25 04:05:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021433.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/021433hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1tbfa_ a.211.1.2 (A:) cGMP-sp 8.7 4.1E+02 0.03 21.9 7.4 57 86-153 77-133 (326)
2 d1tc3c_ a.4.1.2 (C:) Transposa 8.0 84 0.0061 19.7 1.7 14 24-37 36-49 (51)
3 d1kqfc_ f.21.1.1 (C:) Formate 7.0 2.1E+02 0.015 21.8 4.3 18 239-256 150-167 (216)
4 d3dy8a1 a.211.1.2 (A:182-505) 6.5 5.3E+02 0.039 21.1 7.1 60 86-156 68-127 (324)
5 d1weoa_ g.44.1.1 (A:) Cellulos 6.0 90 0.0066 21.9 1.1 19 266-284 65-87 (93)
6 d1taza_ a.211.1.2 (A:) Catalyt 4.8 7.2E+02 0.052 20.6 6.9 57 87-154 76-132 (357)
7 d2axtc1 f.55.1.1 (C:27-473) Ph 4.6 1.9E+02 0.014 26.0 2.7 19 5-23 209-227 (447)
8 d1m56d_ f.23.8.1 (D:) Bacteria 4.6 3.8E+02 0.028 15.9 3.9 31 140-170 2-35 (42)
9 d1qled_ f.23.8.1 (D:) Bacteria 4.6 3.8E+02 0.028 16.0 3.9 31 140-170 3-36 (43)
10 d1y2ka1 a.211.1.2 (A:86-411) C 3.7 9.4E+02 0.069 19.3 6.7 58 86-154 72-129 (326)
No 1
>d1tbfa_ a.211.1.2 (A:) cGMP-specific 3',5'-cyclic phosphodiesterase pde5a1-Ibmx {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.65 E-value=4.1e+02 Score=21.92 Aligned_cols=57 Identities=23% Similarity=0.181 Sum_probs=34.2
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHH
Q 021433 86 NHLHNFEHATISLTFFTYAALSIVLDKTCSKLQYGLTQFLGAIAFGQQFLLFHLHSADHMGVEGQYHL 153 (312)
Q Consensus 86 ~~l~n~qH~tmy~~F~l~g~v~ll~~~~~~~~p~~l~~l~~alAF~~E~lLf~~H~~~~~~le~~~H~ 153 (312)
+..+||.|+.-=+-+..+ ++........-..++.+.+.+|=. .|--||+|+.+.++.
T Consensus 77 ~pyHN~~HA~dV~q~~~~----~l~~~~l~~~l~~~e~~alliAal-------~HDv~HpG~~N~flv 133 (326)
T d1tbfa_ 77 VAYHNWRHAFNTAQCMFA----ALKAGKIQNKLTDLEILALLIAAL-------SHDLDHPGVSNQFLI 133 (326)
T ss_dssp SSSSSHHHHHHHHHHHHH----HHHTTCCGGGSCHHHHHHHHHHHH-------HTTTTCCSSCHHHHH
T ss_pred CCCccHHHHHHHHHHHHH----HHhcCCCCccCCHHHHHHHHHHHH-------HhccCCCCcchHHHH
Confidence 357899999876655433 444432222334455544444432 388899999888764
No 2
>d1tc3c_ a.4.1.2 (C:) Transposase tc3a1-65 {Caenorhabditis elegans [TaxId: 6239]}
Probab=8.02 E-value=84 Score=19.69 Aligned_cols=14 Identities=29% Similarity=0.382 Sum_probs=11.2
Q ss_pred HHHHHHhhCCCCCc
Q 021433 24 NHIKLHSLRPNSYT 37 (312)
Q Consensus 24 ~~~~~y~~~~~~y~ 37 (312)
+.+++|+++|-+|-
T Consensus 36 ~~ir~Yl~~Pl~YG 49 (51)
T d1tc3c_ 36 HCIRVYLKDPVSYG 49 (51)
T ss_dssp HHHHHHHHCSTTTT
T ss_pred HHHHHHhcChhhcc
Confidence 56888999998873
No 3
>d1kqfc_ f.21.1.1 (C:) Formate dehydrogenase N, cytochrome (gamma) subunit {Escherichia coli [TaxId: 562]}
Probab=6.99 E-value=2.1e+02 Score=21.79 Aligned_cols=18 Identities=6% Similarity=0.034 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 021433 239 QFSWFLIGVTIFSVSLYL 256 (312)
Q Consensus 239 ~F~Whl~~~~v~~~~~y~ 256 (312)
...+|-....++++.+-+
T Consensus 150 ~~~iH~~~~~l~~~~vi~ 167 (216)
T d1kqfc_ 150 SLLIHAAAGIILIHAILI 167 (216)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 346787777666555443
No 4
>d3dy8a1 a.211.1.2 (A:182-505) High-affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A, PDE9A {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.48 E-value=5.3e+02 Score=21.12 Aligned_cols=60 Identities=20% Similarity=0.203 Sum_probs=33.4
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHH
Q 021433 86 NHLHNFEHATISLTFFTYAALSIVLDKTCSKLQYGLTQFLGAIAFGQQFLLFHLHSADHMGVEGQYHLLLQ 156 (312)
Q Consensus 86 ~~l~n~qH~tmy~~F~l~g~v~ll~~~~~~~~p~~l~~l~~alAF~~E~lLf~~H~~~~~~le~~~H~LL~ 156 (312)
+..+||.|+.-=+-+.-+ ++........-..++.+.+-+|= -.|--||+|+.+.++.=..
T Consensus 68 npYHN~~HA~dV~q~~~~----ll~~~~~~~~l~~~e~~alliAa-------l~HD~~HpG~~N~fl~~~~ 127 (324)
T d3dy8a1 68 NPFHNFRHCFCVAQMMYS----MVWLCSLQEKFSQTDILILMTAA-------ICHDLDHPGYNNTYQINAR 127 (324)
T ss_dssp CSSSSHHHHHHHHHHHHH----HHHHTTGGGTSCHHHHHHHHHHH-------HHTTTTCCSSCHHHHHHHT
T ss_pred CCCcCHHHHHHHHHHHHH----HHHhcccccccChHHHHHHHHHH-------HHHccCCCCCChHHHHhcC
Confidence 457899999766554443 33332111111234443333332 2488899999988875443
No 5
>d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=5.95 E-value=90 Score=21.95 Aligned_cols=19 Identities=42% Similarity=0.760 Sum_probs=11.7
Q ss_pred ccccccccc----cCCCCccchh
Q 021433 266 KVEYSSLTR----EEDEDSDDVE 284 (312)
Q Consensus 266 ~~~Y~~L~~----~~~~~~~d~~ 284 (312)
+..|+++.. +.||++||++
T Consensus 65 kt~Ykr~kgsprv~gDe~e~~~d 87 (93)
T d1weoa_ 65 KTRYKRLRGSPRVEGDEDEEDID 87 (93)
T ss_dssp CCCCCCCTTCCCCTTSCCCCCSC
T ss_pred CChhhhhcCCCCCCCCccccccc
Confidence 457888844 4466555654
No 6
>d1taza_ a.211.1.2 (A:) Catalytic domain of cyclic nucleotide phosphodiesterase 1b, PDE1B {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.77 E-value=7.2e+02 Score=20.65 Aligned_cols=57 Identities=18% Similarity=0.197 Sum_probs=32.4
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHH
Q 021433 87 HLHNFEHATISLTFFTYAALSIVLDKTCSKLQYGLTQFLGAIAFGQQFLLFHLHSADHMGVEGQYHLL 154 (312)
Q Consensus 87 ~l~n~qH~tmy~~F~l~g~v~ll~~~~~~~~p~~l~~l~~alAF~~E~lLf~~H~~~~~~le~~~H~L 154 (312)
..+||.|+.-=+-+.-+ ++........-..++.+.+.+|= -.|--||+|..+.++.-
T Consensus 76 PYHN~~HA~dV~q~~~~----lL~~~~~~~~l~~~E~~alliAa-------l~HD~~HpG~~N~flv~ 132 (357)
T d1taza_ 76 PYHNQIHAADVTQTVHC----FLLRTGMVHCLSEIELLAIIFAA-------AIHDYEHTGTTNSFHIQ 132 (357)
T ss_dssp SSSSHHHHHHHHHHHHH----HHHHHSGGGGSCHHHHHHHHHHH-------HHTTTTCCSSCHHHHHH
T ss_pred CcccHHHHHHHHHHHHH----HHhcccccccCCHHHHHHHHHHH-------HHHhcCCCCcchHHHHh
Confidence 47899999876544332 23332222223345544443332 24888999998877644
No 7
>d2axtc1 f.55.1.1 (C:27-473) Photosystem II CP43 protein PsbC {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=4.65 E-value=1.9e+02 Score=25.96 Aligned_cols=19 Identities=42% Similarity=0.884 Sum_probs=17.3
Q ss_pred ccchhhhHHHHHHHHHHHH
Q 021433 5 VGHVAPGFAFLALGLWHLL 23 (312)
Q Consensus 5 ~GH~lPG~~Fl~~GLW~~~ 23 (312)
.||+.-|+..++=|+||..
T Consensus 209 ggHi~~g~~~I~GGiwHI~ 227 (447)
T d2axtc1 209 GGHIWIGLICIAGGIWHIL 227 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHhheeeee
Confidence 4799999999999999975
No 8
>d1m56d_ f.23.8.1 (D:) Bacterial aa3 type cytochrome c oxidase subunit IV {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=4.57 E-value=3.8e+02 Score=15.91 Aligned_cols=31 Identities=16% Similarity=0.290 Sum_probs=20.3
Q ss_pred hcCCCCCchh---HHHHHHHHHHHHHHHHHHhhh
Q 021433 140 HSADHMGVEG---QYHLLLQIVVLVSLITTLLGI 170 (312)
Q Consensus 140 H~~~~~~le~---~~H~LL~~~i~~~~~~~~le~ 170 (312)
|-||.++++. .+...+-.+...|.++..+.+
T Consensus 2 HkHG~MDi~vQEKTF~gFik~~t~~~i~~i~~li 35 (42)
T d1m56d_ 2 HVAGSMDITQQEKTFAGFVRMVTWAAVVIVAALI 35 (42)
T ss_dssp CCTTCSCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5667777644 477777777777766665443
No 9
>d1qled_ f.23.8.1 (D:) Bacterial aa3 type cytochrome c oxidase subunit IV {Paracoccus denitrificans [TaxId: 266]}
Probab=4.57 E-value=3.8e+02 Score=15.96 Aligned_cols=31 Identities=13% Similarity=0.268 Sum_probs=20.4
Q ss_pred hcCCCCCchh---HHHHHHHHHHHHHHHHHHhhh
Q 021433 140 HSADHMGVEG---QYHLLLQIVVLVSLITTLLGI 170 (312)
Q Consensus 140 H~~~~~~le~---~~H~LL~~~i~~~~~~~~le~ 170 (312)
|-||.++++. .+...+-.+...|.++..+.+
T Consensus 3 HkHG~MDi~vQEkTF~gFi~~~t~~~i~~i~~li 36 (43)
T d1qled_ 3 HKHGEMDIRHQQATFAGFIKGATWVSILSIAVLV 36 (43)
T ss_dssp CCTTCSCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5667777644 477777777777766665544
No 10
>d1y2ka1 a.211.1.2 (A:86-411) Catalytic domain of cyclic nucleotide phosphodiesterase pde4d {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.66 E-value=9.4e+02 Score=19.28 Aligned_cols=58 Identities=21% Similarity=0.204 Sum_probs=32.3
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHH
Q 021433 86 NHLHNFEHATISLTFFTYAALSIVLDKTCSKLQYGLTQFLGAIAFGQQFLLFHLHSADHMGVEGQYHLL 154 (312)
Q Consensus 86 ~~l~n~qH~tmy~~F~l~g~v~ll~~~~~~~~p~~l~~l~~alAF~~E~lLf~~H~~~~~~le~~~H~L 154 (312)
+..+||.|+.-=+-+.-+ ++........-..++.+.+.+|= -.|--||+|+.+.++.=
T Consensus 72 ~pyHN~~HA~dV~q~~~~----ll~~~~l~~~l~~~e~~alliAa-------l~HDv~HpG~~N~fl~~ 129 (326)
T d1y2ka1 72 VAYHNNIHAADVVQSTHV----LLSTPALEAVFTDLEILAAIFAS-------AIHDVDHPGVSNQFLIN 129 (326)
T ss_dssp CSSSSHHHHHHHHHHHHH----HHTCGGGTTTSCHHHHHHHHHHH-------HHTTTTCCSSCHHHHHH
T ss_pred CCCccHHHHHHHHHHHHH----HHhccchhhhCCHHHHHHHHHHH-------HHhccCCCCCCchHHHh
Confidence 357899999875554432 33332112222334444433332 24788899998887643
Done!