BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021435
(312 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9XSJ0|UCHL5_BOVIN Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Bos taurus
GN=UCHL5 PE=2 SV=1
Length = 328
Score = 297 bits (760), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 154/312 (49%), Positives = 214/312 (68%), Gaps = 26/312 (8%)
Query: 4 QVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDDRVVIKDPN-PNLFFASQVINNACAT 62
QVEE++SL+ ++ L+PV+GLIFLFKW+PGE+ V++D +FFA QVINNACAT
Sbjct: 31 QVEEIWSLEPENFEKLKPVHGLIFLFKWQPGEEPAGSVVQDSRLDTIFFAKQVINNACAT 90
Query: 63 QAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFV 120
QAI+S+LLNC D+ +G LS+ KEF+++F +KGLA++NSD IR HNSFAR + F
Sbjct: 91 QAIVSVLLNCTHQDVHLGETLSEFKEFSQSFDAAMKGLALSNSDVIRQVHNSFARQQMF- 149
Query: 121 PEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQ 180
+ K A K++D +HF+SY+PV+G LYELDGL+EGPI LG C DW+ V+PVI+
Sbjct: 150 EFDAKTAAKEEDAFHFVSYVPVNGRLYELDGLREGPIDLGACNQD----DWISAVRPVIE 205
Query: 181 ERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERILQQLASLQSERMVDKTSFEA 240
+RI++YS+ EIRFNLMA++ +RK +Y ++ E QR+ L E M
Sbjct: 206 KRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQRQ----------LAEEPMDTDQGSNM 255
Query: 241 LNKSLSEVNAGIEGATEKILMEEE--KFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLK 298
L+ SEV A ++L+EEE K K+++ ENIRRKHNY+PF+ LK LAE +QL
Sbjct: 256 LSAIQSEV------AKNQMLIEEEVQKLKRYKIENIRRKHNYLPFIMELLKTLAEHQQLI 309
Query: 299 PLIEKAKQKTSS 310
PL+EKAK+K ++
Sbjct: 310 PLVEKAKEKQNA 321
>sp|Q9WUP7|UCHL5_MOUSE Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Mus musculus
GN=Uchl5 PE=2 SV=2
Length = 329
Score = 296 bits (759), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 156/312 (50%), Positives = 215/312 (68%), Gaps = 25/312 (8%)
Query: 4 QVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDDRVVIKDPN-PNLFFASQVINNACAT 62
QVEE++SL+ +S L+PV+GLIFLFKW+PGE+ V++D +FFA QVINNACAT
Sbjct: 31 QVEEIWSLEPESFEKLKPVHGLIFLFKWQPGEEPAGSVVQDSRLETIFFAKQVINNACAT 90
Query: 63 QAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFV 120
QAI+S+LLNC D+ +G LS+ KEF+++F +KGLA++NSD IR HNSFAR + F
Sbjct: 91 QAIVSVLLNCTHQDVHLGETLSEFKEFSQSFDAAMKGLALSNSDVIRQVHNSFARQQMF- 149
Query: 121 PEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQ 180
+ K K++D +HF+SY+PV+G LYELDGL+EGPI LG C DW+ V+PVI+
Sbjct: 150 EFDTKTPAKEEDAFHFVSYVPVNGRLYELDGLREGPIDLGACNQD----DWITAVRPVIE 205
Query: 181 ERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERILQQLASLQSERMVDKTSFEA 240
+RI++YS+ EIRFNLMA++ +RK +Y ++ E QR QLA + E M
Sbjct: 206 KRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQR-------QLA--EEEPMDTDQGSTV 256
Query: 241 LNKSLSEVNAGIEGATEKILMEEE--KFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLK 298
L+ SEV A ++L+EEE K K+++ ENIRRKHNY+PF+ LK LAE +QL
Sbjct: 257 LSAIQSEV------ARNQMLIEEEVQKLKRYKIENIRRKHNYLPFIMELLKTLAEHQQLI 310
Query: 299 PLIEKAKQKTSS 310
PL+EKAK+K ++
Sbjct: 311 PLVEKAKEKQNA 322
>sp|Q06AT3|UCHL5_PIG Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Sus scrofa
GN=UCHL5 PE=2 SV=1
Length = 329
Score = 296 bits (757), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 155/312 (49%), Positives = 216/312 (69%), Gaps = 25/312 (8%)
Query: 4 QVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDDRVVIKDPN-PNLFFASQVINNACAT 62
QVEE++SL+ ++ L+PV+GLIFLFKW+PGE+ V++D +FFA QVINNACAT
Sbjct: 31 QVEEIWSLEPENFEKLKPVHGLIFLFKWQPGEEPAGSVVQDSRLDTIFFAKQVINNACAT 90
Query: 63 QAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFV 120
QAI+S+LLNC D+ +G LS+ KEF+++F +KGLA++NSD IR HNSFAR + F
Sbjct: 91 QAIVSVLLNCTHQDVHLGETLSEFKEFSQSFDAAMKGLALSNSDVIRQVHNSFARQQMF- 149
Query: 121 PEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQ 180
+ K + K++D +HF+SY+PV+G LYELDGL+EGPI LG C DW+ V+PVI+
Sbjct: 150 EFDAKTSAKEEDAFHFVSYVPVNGRLYELDGLREGPIDLGACNQD----DWISAVRPVIE 205
Query: 181 ERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERILQQLASLQSERMVDKTSFEA 240
+RI++YS+ EIRFNLMA++ +RK +Y ++ E QR QLA + E M
Sbjct: 206 KRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQR-------QLA--EEEPMDTDQGSNM 256
Query: 241 LNKSLSEVNAGIEGATEKILMEEE--KFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLK 298
L+ SEV A ++L+EEE K K+++ ENIRRKHNY+PF+ LK LAE +QL
Sbjct: 257 LSAIQSEV------AKNQMLIEEEVQKLKRYKIENIRRKHNYLPFIMELLKTLAEHQQLI 310
Query: 299 PLIEKAKQKTSS 310
PL+EKAK+K ++
Sbjct: 311 PLVEKAKEKQNA 322
>sp|Q9Y5K5|UCHL5_HUMAN Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Homo sapiens
GN=UCHL5 PE=1 SV=3
Length = 329
Score = 296 bits (757), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 153/312 (49%), Positives = 217/312 (69%), Gaps = 25/312 (8%)
Query: 4 QVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDDRVVIKDPN-PNLFFASQVINNACAT 62
QVEE++SL+ ++ L+PV+GLIFLFKW+PGE+ V++D +FFA QVINNACAT
Sbjct: 31 QVEEIWSLEPENFEKLKPVHGLIFLFKWQPGEEPAGSVVQDSRLDTIFFAKQVINNACAT 90
Query: 63 QAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFV 120
QAI+S+LLNC D+ +G LS+ KEF+++F +KGLA++NSD IR HNSFAR + F
Sbjct: 91 QAIVSVLLNCTHQDVHLGETLSEFKEFSQSFDAAMKGLALSNSDVIRQVHNSFARQQMF- 149
Query: 121 PEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQ 180
+ K + K++D +HF+SY+PV+G LYELDGL+EGPI LG C DW+ V+PVI+
Sbjct: 150 EFDTKTSAKEEDAFHFVSYVPVNGRLYELDGLREGPIDLGACNQD----DWISAVRPVIE 205
Query: 181 ERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERILQQLASLQSERMVDKTSFEA 240
+RI++YS+ EIRFNLMA++ +RK +Y ++ E QR+ L E +D +
Sbjct: 206 KRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQRQ----------LAEEEPMDT---DQ 252
Query: 241 LNKSLSEVNAGIEGATEKILMEEE--KFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLK 298
N LS + + E A ++L+EEE K K+++ ENIRRKHNY+PF+ LK LAE +QL
Sbjct: 253 GNSMLSAIQS--EVAKNQMLIEEEVQKLKRYKIENIRRKHNYLPFIMELLKTLAEHQQLI 310
Query: 299 PLIEKAKQKTSS 310
PL+EKAK+K ++
Sbjct: 311 PLVEKAKEKQNA 322
>sp|Q54N38|UCHL5_DICDI Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Dictyostelium
discoideum GN=uch2 PE=3 SV=1
Length = 343
Score = 291 bits (745), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 155/316 (49%), Positives = 209/316 (66%), Gaps = 17/316 (5%)
Query: 3 MQVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDDRVVIKDPNPNLFFASQVINNACAT 62
+QVEELY+LD + L+PV GLIFLFKW E+++R + N N+FFA+QVI NACAT
Sbjct: 29 IQVEELYTLDSSEYDRLKPVLGLIFLFKWEK-EEENRTI--SDNENIFFANQVIQNACAT 85
Query: 63 QAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPE 122
QAILS+LLN I++G ELS K F +FPP +KG AI NS+ I+ HNSF +PF+
Sbjct: 86 QAILSVLLNSEGIELGEELSNFKSFVGDFPPMMKGEAIGNSELIKETHNSFTVQDPFIFS 145
Query: 123 EQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQER 182
++K K D +HFIS+IP G +YELDGLK+GP LG CT +WL++ P IQ+R
Sbjct: 146 KKKNR-KPSDAFHFISFIPFQGKVYELDGLKKGPYCLGDCTPD----NWLEIATPFIQKR 200
Query: 183 IERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERILQQLASLQSERMVDK------- 235
+E+YS+ EIRFNLMAVIKNR+ ++ ++K+ + +L+ L S D
Sbjct: 201 MEKYSQGEIRFNLMAVIKNRQTTLQEKILTLEKKKNDLEIKLSELNSGSGGDNKEESGGA 260
Query: 236 --TSFEALNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKILAE 293
T+ E LN ++ VN IE A +ILME+EKF+ W+ ENIRRKHN+ P + N +K LAE
Sbjct: 261 TPTTKEDLNFMINVVNNDIEEANNEILMEQEKFRNWKDENIRRKHNFTPLILNLIKGLAE 320
Query: 294 KKQLKPLIEKAKQKTS 309
K L+PLI+KAK + S
Sbjct: 321 KDNLQPLIQKAKDQIS 336
>sp|Q9UUB6|UBLH2_SCHPO Ubiquitin carboxyl-terminal hydrolase 2 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=uch2 PE=1 SV=1
Length = 300
Score = 228 bits (581), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 131/314 (41%), Positives = 177/314 (56%), Gaps = 48/314 (15%)
Query: 3 MQVEELYSLDLDSLNNLRPVYGLIFLFKWRPG-EKDDRVVIKDPNPNLFFASQVINNACA 61
++V+ELYSLD+DSL +YG+IFLFKW +K D + D N+FFA QVINNACA
Sbjct: 25 VEVDELYSLDVDSLRQFPDIYGIIFLFKWNSKVDKPDGTMDYDSMDNIFFAKQVINNACA 84
Query: 62 TQAILSILLNCPD-IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFV 120
TQA+LS+LLN D ID+G LS+ K+F+K PPELKG A+ NS+ IR HNSFAR +PF+
Sbjct: 85 TQALLSVLLNHSDEIDLGTTLSEFKDFSKTLPPELKGEALGNSEHIRCCHNSFARSDPFI 144
Query: 121 PEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQ 180
EE +AA +D+VYHFI+Y ++ V YELDGL+ PI+ G CT + + + VIQ
Sbjct: 145 SEEVRAATDEDEVYHFIAYTNINNVFYELDGLQAAPINHGSCTKEE----FAEKAVSVIQ 200
Query: 181 ERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERILQQLASLQSERMVDKTSFEA 240
RI Y +EIRFNLM + K++K A L L E + D
Sbjct: 201 ARIANYDPAEIRFNLMVICKDKK----ASL----------------LTREDLTD------ 234
Query: 241 LNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKILA----EKKQ 296
E I +E+EK +W+ EN R+HN++ K+L +K
Sbjct: 235 ------------EEKAASIAVEDEKRLRWKRENQLRRHNFVGLFVELSKLLVKDRIDKNT 282
Query: 297 LKPLIEKAKQKTSS 310
+E AK K +S
Sbjct: 283 WNSTLETAKAKYAS 296
>sp|Q09444|UBH4_CAEEL Probable ubiquitin carboxyl-terminal hydrolase ubh-4
OS=Caenorhabditis elegans GN=ubh-4 PE=3 SV=2
Length = 321
Score = 220 bits (560), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 123/312 (39%), Positives = 184/312 (58%), Gaps = 36/312 (11%)
Query: 3 MQVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDDRVVIKDPNPNLFFASQVINNACAT 62
+QVEELYSLD D RP YGLIFLFKWR G D+ I N+FFA Q I NACAT
Sbjct: 29 LQVEELYSLDDDKAMT-RPTYGLIFLFKWRQG--DETTGIPSDKQNIFFAHQTIQNACAT 85
Query: 63 QAILSILLNCPDIDI--GPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFV 120
QA++++L+N D D+ G L++ KEF + P +G ++NS+ IR HNSF+R F
Sbjct: 86 QALINLLMNVEDTDVKLGNILNQYKEFAIDLDPNTRGHCLSNSEEIRTVHNSFSRQTLF- 144
Query: 121 PEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQ 180
E G+ +D YHF++Y+P+ +YELDGL+E P+ + Q + DW++ ++PVIQ
Sbjct: 145 -ELDIKGGESEDNYHFVTYVPIGNKVYELDGLRELPLEVAEF---QKEQDWIEAIKPVIQ 200
Query: 181 ERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERILQQLASLQSERMVDKTSFEA 240
+R+++YS+ EI FNLMA++ NRK+ + Q E ++Q + + E +
Sbjct: 201 QRMQKYSEGEITFNLMALVPNRKQ-------KLQEMMENLIQANENNELEEQI-----AD 248
Query: 241 LNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPL 300
LNK++++ E+ K + +R EN RR+HNY PF+ +KILA++ +L L
Sbjct: 249 LNKAIAD--------------EDYKMEMYRKENNRRRHNYTPFVIELMKILAKEGKLVGL 294
Query: 301 IEKAKQKTSSSS 312
++ A Q S
Sbjct: 295 VDNAYQAAKEKS 306
>sp|D3ZHS6|BAP1_RAT Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Rattus norvegicus
GN=Bap1 PE=3 SV=2
Length = 727
Score = 190 bits (482), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/242 (46%), Positives = 148/242 (61%), Gaps = 23/242 (9%)
Query: 3 MQVEELYSLDLDSLNNLRPVYGLIFLFKW----RPGEK-----DDRVVIKDPNPN-LFFA 52
+QVEE+Y L PVYG IFLFKW R K DD VI D N +FFA
Sbjct: 27 VQVEEIYDLQSKCQG---PVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIVNSMFFA 83
Query: 53 SQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNS 112
Q+I N+CAT A+LS+LLNC ++D+GP LS++K+FTK F PE KG AI N+ + AHNS
Sbjct: 84 HQLIPNSCATHALLSVLLNCSNVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKAHNS 143
Query: 113 FARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDM 169
ARPEP +PE+Q +A + + +HF+SY+P+ G L+ELDGLK PI GP G+ D
Sbjct: 144 HARPEPRHLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPW--GE-DE 200
Query: 170 DWLQMVQPVIQERIERYSKSE----IRFNLMAVIKNRKELYTAELKEFQRKRERILQQLA 225
+W + VI ERI + E IRFNLMAV+ +R+ Y A L + R+ +L+ L
Sbjct: 201 EWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRVKYEARLHVLKGNRQTVLEALQ 260
Query: 226 SL 227
L
Sbjct: 261 QL 262
Score = 38.9 bits (89), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 257 EKILMEE-EKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 303
E L EE EK KK++ ++ RR HNY F+ F+ +LA++ L L+E+
Sbjct: 645 EACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLANLVEQ 692
>sp|Q92560|BAP1_HUMAN Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Homo sapiens GN=BAP1
PE=1 SV=2
Length = 729
Score = 188 bits (478), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 112/242 (46%), Positives = 147/242 (60%), Gaps = 23/242 (9%)
Query: 3 MQVEELYSLDLDSLNNLRPVYGLIFLFKW----RPGEK-----DDRVVIKDP-NPNLFFA 52
+QVEE+Y L PVYG IFLFKW R K DD VI D N+FFA
Sbjct: 27 VQVEEIYDLQSKCQG---PVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIVNNMFFA 83
Query: 53 SQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNS 112
Q+I N+CAT A+LS+LLNC +D+GP LS++K+FTK F PE KG AI N+ + AHNS
Sbjct: 84 HQLIPNSCATHALLSVLLNCSSVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKAHNS 143
Query: 113 FARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDM 169
ARPEP +PE+Q +A + + +HF+SY+P+ G L+ELDGLK PI GP G+ D
Sbjct: 144 HARPEPRHLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPW--GE-DE 200
Query: 170 DWLQMVQPVIQERIERYSKSE----IRFNLMAVIKNRKELYTAELKEFQRKRERILQQLA 225
+W + VI ERI + E IRFNLMAV+ +R+ Y A L + R+ +L+ L
Sbjct: 201 EWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRIKYEARLHVLKVNRQTVLEALQ 260
Query: 226 SL 227
L
Sbjct: 261 QL 262
Score = 38.5 bits (88), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 257 EKILMEE-EKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 303
E L EE EK KK++ ++ RR HNY F+ F+ +LA++ L L+E+
Sbjct: 647 EACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLANLVEQ 694
>sp|Q99PU7|BAP1_MOUSE Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Mus musculus GN=Bap1
PE=1 SV=1
Length = 728
Score = 187 bits (475), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 111/242 (45%), Positives = 147/242 (60%), Gaps = 23/242 (9%)
Query: 3 MQVEELYSLDLDSLNNLRPVYGLIFLFKW----RPGEK-----DDRVVIKDP-NPNLFFA 52
+QVEE+Y L PVYG IFLFKW R K DD VI D N+FFA
Sbjct: 27 VQVEEIYDLQSKCQG---PVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIVNNMFFA 83
Query: 53 SQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNS 112
Q+I N+CAT A+LS+LLNC ++D+GP LS++K+FTK F PE KG AI N+ + AHNS
Sbjct: 84 HQLIPNSCATHALLSVLLNCSNVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKAHNS 143
Query: 113 FARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDM 169
ARPEP +PE+Q +A + + +HF+SY+P+ G L+ELDGLK PI GP G+ D
Sbjct: 144 HARPEPRHLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPW--GE-DE 200
Query: 170 DWLQMVQPVIQERIERYSKSE----IRFNLMAVIKNRKELYTAELKEFQRKRERILQQLA 225
+W + VI ERI + E IRFNLMAV+ +R+ Y L + R+ +L+ L
Sbjct: 201 EWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRIKYETRLHVLKVNRQTVLEALQ 260
Query: 226 SL 227
L
Sbjct: 261 QL 262
Score = 38.5 bits (88), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 257 EKILMEE-EKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 303
E L EE EK KK++ ++ RR HNY F+ F+ +LA++ L L+E+
Sbjct: 646 EACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLANLVEQ 693
>sp|Q66JB6|BAP1_XENTR Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Xenopus tropicalis
GN=bap1 PE=2 SV=1
Length = 685
Score = 185 bits (470), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/242 (45%), Positives = 146/242 (60%), Gaps = 23/242 (9%)
Query: 3 MQVEELYSLDLDSLNNLRPVYGLIFLFKW----RPGEK-----DDRVVIKDPN-PNLFFA 52
+QVEE+Y L PVYG IFLFKW R K DD V++D N+FFA
Sbjct: 27 VQVEEIYDLQSKCPG---PVYGFIFLFKWIEERRSRRKVSTLLDDTSVMEDEVVNNMFFA 83
Query: 53 SQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNS 112
Q+I N+CAT A+LS+LLNC + +GP LS++KEFTK F PE KG AI N+ + AHNS
Sbjct: 84 HQLIPNSCATHALLSVLLNCSGVHLGPTLSRIKEFTKGFSPESKGYAIGNAPELAKAHNS 143
Query: 113 FARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDM 169
ARPEP +PE+Q +A + + +HF+SY+P+ G L+ELDGLK PI GP D
Sbjct: 144 HARPEPRHLPEKQNGISAVRTMEAFHFVSYVPIKGRLFELDGLKVYPIDHGPWA---EDE 200
Query: 170 DWLQMVQPVIQERIERYSKSE----IRFNLMAVIKNRKELYTAELKEFQRKRERILQQLA 225
+W + VI ERI + E IRFNLMAV+ +R+ Y ++L + R+ +L+ L
Sbjct: 201 EWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRLKYESKLHILKMNRQTVLEALQ 260
Query: 226 SL 227
L
Sbjct: 261 QL 262
Score = 38.9 bits (89), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 255 ATEKILMEE-EKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 303
++E L EE EK KK++ ++ RR HNY F+ F+ +LA++ L L+E+
Sbjct: 601 SSEACLREELEKRKKFKIDDQRRTHNYDEFICAFISMLAQEGMLASLVEQ 650
>sp|Q5F3N6|BAP1_CHICK Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Gallus gallus GN=BAP1
PE=2 SV=1
Length = 700
Score = 184 bits (467), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 105/242 (43%), Positives = 144/242 (59%), Gaps = 23/242 (9%)
Query: 3 MQVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDDR----------VVIKDPNPNLFFA 52
+QVEE+Y L PVYG IFLFKW + R V+ D N+FFA
Sbjct: 27 VQVEEIYDLQSKCQG---PVYGFIFLFKWIEESRSRRKVSTLVDETSVIDDDIVNNMFFA 83
Query: 53 SQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNS 112
Q+I N+CAT A+LS+LLNC ++D+GP LS++K+FTK F PE KG AI N+ + A NS
Sbjct: 84 HQLIPNSCATHALLSVLLNCNNVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKARNS 143
Query: 113 FARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDM 169
ARPEP +PE+Q +A + + +HF+SY+P+ G L+ELDGLK PI GP D
Sbjct: 144 HARPEPRHLPEKQNGISAVRTMEAFHFVSYVPIKGRLFELDGLKVYPIDHGPWA---DDE 200
Query: 170 DWLQMVQPVIQERIERYSKSE----IRFNLMAVIKNRKELYTAELKEFQRKRERILQQLA 225
+W + VI ERI + E IRFNLMAV+ +R+ Y ++L + R+ +L+ L
Sbjct: 201 EWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRMKYESKLHILKMNRQTVLEALQ 260
Query: 226 SL 227
L
Sbjct: 261 QL 262
Score = 39.3 bits (90), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 257 EKILMEE-EKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 303
E L EE EK KK++ ++ RR HNY F+ F+ +LA++ L L+E+
Sbjct: 618 EACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLASLVEQ 665
>sp|Q52L14|BAP1_XENLA Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Xenopus laevis
GN=bap1 PE=2 SV=1
Length = 618
Score = 184 bits (467), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 114/264 (43%), Positives = 153/264 (57%), Gaps = 34/264 (12%)
Query: 3 MQVEELYSLDLDSLNNLRPVYGLIFLFKW----RPGEK-----DDRVVIKDP--NPNLFF 51
+QVEE+Y L PVYG IFLFKW R K DD V++D N N+FF
Sbjct: 27 VQVEEIYDLQSKCPG---PVYGFIFLFKWIEERRSRRKVSTLLDDTSVMEDEVVN-NMFF 82
Query: 52 ASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHN 111
A Q+I N+CAT A+LS+LLNC + +GP LS++KEFTK F PE KG AI N+ + AHN
Sbjct: 83 AHQLIPNSCATHALLSVLLNCGGVHLGPTLSRIKEFTKGFSPESKGYAIGNAPELAKAHN 142
Query: 112 SFARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGD 168
S ARPEP +PE+Q +A + + +HF+SY+P+ G L+ELDGLK PI GP D
Sbjct: 143 SHARPEPRHLPEKQNGISAVRTMEAFHFVSYVPIKGRLFELDGLKVYPIDHGPWA---ED 199
Query: 169 MDWLQMVQPVIQERIERYSKSE----IRFNLMAVIKNRKELYTAELKEFQRKRERILQQL 224
+W + VI ERI + E IRFNLMAV+ +R+ Y +L + R+ +L+ L
Sbjct: 200 EEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRLKYEGKLNILKMNRQTVLEAL 259
Query: 225 ASL---------QSERMVDKTSFE 239
L Q+++ D S E
Sbjct: 260 QQLIRVTQPELIQAQKSTDGQSTE 283
>sp|A1L2G3|BAP1_DANRE Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Danio rerio GN=bap1
PE=2 SV=2
Length = 755
Score = 181 bits (459), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 110/255 (43%), Positives = 155/255 (60%), Gaps = 23/255 (9%)
Query: 3 MQVEELYSLDLDSLNNLRPVYGLIFLFKW----RPGEK-----DDRVVIKDPNPN-LFFA 52
+QVEE+Y L + PVYG IFLFKW R K D+ VI D N +FFA
Sbjct: 27 VQVEEIYDLQSKCQS---PVYGFIFLFKWIEERRSRRKVSTLVDETSVIDDDIVNDMFFA 83
Query: 53 SQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNS 112
Q+I N+CAT A+LS+LLNC +++G LS++K FTK F PE KG AI N+ + AHNS
Sbjct: 84 HQLIPNSCATHALLSVLLNCSGVELGMTLSRMKAFTKGFNPESKGYAIGNAPELAKAHNS 143
Query: 113 FARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDM 169
ARPEP +PE+Q +A + + +HF+SY+P+ L+ELDGLK PI GP G+ D
Sbjct: 144 HARPEPRHLPEKQNGISAVRTMEAFHFVSYVPIKDRLFELDGLKAYPIDHGPW--GE-DE 200
Query: 170 DWLQMVQPVIQERIERYSKSE----IRFNLMAVIKNRKELYTAELKEFQRKRERILQQLA 225
+W + VI ERI + E IRFNLMAV+ +R+ Y ++L +R R+ IL+ L
Sbjct: 201 EWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRIKYESKLDILKRNRQIILEGLQ 260
Query: 226 SLQSERMVDKTSFEA 240
++ ++++ T E+
Sbjct: 261 QIREKKVIRMTQQES 275
Score = 38.9 bits (89), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%)
Query: 262 EEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 303
E EK KK++ ++ RR HNY F+ F+ +LA++ L L+E+
Sbjct: 679 EVEKRKKYKIDDQRRTHNYDEFICTFISMLAQEGMLASLVEQ 720
>sp|C4A0D9|BAP1_BRAFL Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Branchiostoma
floridae GN=BAP1 PE=3 SV=1
Length = 694
Score = 174 bits (441), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 104/251 (41%), Positives = 149/251 (59%), Gaps = 26/251 (10%)
Query: 3 MQVEELYSLDLDSLNNLRPVYGLIFLFKWR----------PGEKDDRVVIKDPNPNLFFA 52
+QVEE+Y L S PVYG IFLFKW P ++ VV +D ++FFA
Sbjct: 27 VQVEEIYDL---SKPIEGPVYGFIFLFKWSEERRSRRKVGPSMEESFVVDEDIVNDMFFA 83
Query: 53 SQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNS 112
Q+I N+CAT A+LS+LLNCP I +G L++LK FT+ PE KG AI N I AHNS
Sbjct: 84 QQLIPNSCATHALLSVLLNCPQISLGSTLTRLKYFTRGMGPESKGWAIGNVPEIARAHNS 143
Query: 113 FARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDM 169
ARPEP +PE+Q ++ + + +HF+SY+ + L+ELDGLK PI GP G+ +
Sbjct: 144 HARPEPRHLPEKQTGISSVRTAEAFHFVSYVTTNDRLFELDGLKPYPIDHGPW--GEKE- 200
Query: 170 DWLQMVQPVIQERIERYSKSE----IRFNLMAVIKNRKELYTAELKEFQRKRERI---LQ 222
DW + + VI ERI + E IRFNLMAV+ +R++ Y +L + R+ + LQ
Sbjct: 201 DWTEKFRRVISERIGNATGGENGHDIRFNLMAVVADRRQQYETKLNTLKTNRQIVLEALQ 260
Query: 223 QLASLQSERMV 233
Q+ + +++ +
Sbjct: 261 QVGGVNTKKSI 271
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 245 LSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 303
L V I+ + + E EK KK++ ++ RR HNY F+ FL++LAE+ QL L+++
Sbjct: 597 LKNVETEIQICEQHLKDEIEKRKKYKVDDCRRTHNYDDFIRTFLRMLAEQGQLSKLVDQ 655
>sp|A2VDM8|BAP1_BOVIN Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Bos taurus GN=BAP1
PE=2 SV=1
Length = 711
Score = 167 bits (423), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 146/244 (59%), Gaps = 24/244 (9%)
Query: 3 MQVEELYSLDLDSLNNLRPVYGLIFLFKW----RPGEK-----DDRVVIKDP-NPNLFFA 52
+QVEE+Y L PVYG IFLFKW R K DD VI D N+FFA
Sbjct: 27 VQVEEIYDLQSKCQG---PVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIVNNMFFA 83
Query: 53 SQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNS 112
Q+I N+CAT A+LS+LLNC ++D+GP LS++K+FTK F PE KG AI N+ + AHNS
Sbjct: 84 HQLIPNSCATHALLSVLLNCSNVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKAHNS 143
Query: 113 FARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDM 169
ARPEP +PE+Q +A + + +HF+SY+P+ G L+ELDGLK PI GP G+ D
Sbjct: 144 HARPEPRHLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPW--GE-DE 200
Query: 170 DWLQMVQPVIQERIERYS---KSEIRFNLMAVIKNRKELYTAELKEFQRKRERILQQLAS 226
+W + VI ERI + K E R +++ V NR+ + A + + + ++Q S
Sbjct: 201 EWTDKARRVIMERIGLATAGIKYEARLHVLKV--NRQTVLEALQQLIRVTQPELIQTHKS 258
Query: 227 LQSE 230
+S+
Sbjct: 259 QESQ 262
Score = 38.5 bits (88), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 257 EKILMEE-EKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 303
E L EE EK KK++ ++ RR HNY F+ F+ +LA++ L L+E+
Sbjct: 629 EACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLANLVEQ 676
>sp|B3MIV9|CALYP_DROAN Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
ananassae GN=calypso PE=3 SV=1
Length = 470
Score = 163 bits (413), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 179/342 (52%), Gaps = 51/342 (14%)
Query: 3 MQVEELYSLDLDSLNNLRPV---YGLIFLFKW--------RPGEKDDRVVIKDPNP--NL 49
+QVEE+Y L +P+ YG IFLF+W + E + +KD ++
Sbjct: 66 VQVEEVYDLQ-------KPIESPYGFIFLFRWIEERRARRKIVETTAEIFVKDEEAISSI 118
Query: 50 FFASQVINNACATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIR 107
FFA QV+ N+CAT A+LS+LLNC ++ +G LS+LK TK PE KGLAI N+ +
Sbjct: 119 FFAQQVVPNSCATHALLSVLLNCNENNLQLGDTLSRLKAHTKGMSPENKGLAIGNTPELA 178
Query: 108 AAHNSFARPEPFVPEEQKAAGKDD-----DVYHFISYIPVDGVLYELDGLKEGPISLGPC 162
AHNS A P+ E+ AG + +HF+S++P++G L+ELDGLK P++ G
Sbjct: 179 CAHNSHAMPQARRRLERTGAGVSSCRFTGEAFHFVSFVPINGQLFELDGLKPYPMNHG-- 236
Query: 163 TGGQGDMDWLQMVQPVIQERIE-RYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERI- 220
G + DW + V+ ER+ + +IRFNLMAV+ +R+ T +LK + + +
Sbjct: 237 -GWEDHEDWTDKFRRVMTERLGIATGEQDIRFNLMAVVPDRRIAITHKLKMLRTNQAIVS 295
Query: 221 --LQQL--ASLQSE-------------RMVDKTSFEA--LNKSLSEVNAGIEGATEKILM 261
LQ+L A Q E +++ ++F A L L ++ I + +
Sbjct: 296 GTLQKLLKADEQGEGGNGDPQRPDTPSTLLEPSAFTARDLQSLLKNLDTEIAINEQHLAD 355
Query: 262 EEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 303
E ++ K++ + RR HNY F+ FL +LA + L L+ +
Sbjct: 356 ENDRRHKFKVDASRRTHNYDKFICTFLSMLAHQGVLGELVSQ 397
>sp|B4QHH0|CALYP_DROSI Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
simulans GN=calypso PE=3 SV=1
Length = 471
Score = 162 bits (410), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/342 (33%), Positives = 178/342 (52%), Gaps = 51/342 (14%)
Query: 3 MQVEELYSLDLDSLNNLRPV---YGLIFLFKW--------RPGEKDDRVVIKDPNP--NL 49
+QVEE+Y L +P+ YG IFLF+W + E + +KD ++
Sbjct: 68 VQVEEVYDLQ-------KPIESPYGFIFLFRWIEERRARRKIVETTAEIFVKDEEAISSI 120
Query: 50 FFASQVINNACATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIR 107
FFA QV+ N+CAT A+LS+LLNC ++ +G LS+LK TK PE KGLAI N+ +
Sbjct: 121 FFAQQVVPNSCATHALLSVLLNCNENNLQLGDTLSRLKTHTKGMSPENKGLAIGNTPELA 180
Query: 108 AAHNSFARPEPFVPEEQKAAGKDD-----DVYHFISYIPVDGVLYELDGLKEGPISLGPC 162
AHNS A P+ E+ AG + +HF+S++P++G L+ELDGLK P++ G
Sbjct: 181 CAHNSHAMPQARRRLERTGAGVSSCRFTGEAFHFVSFVPINGQLFELDGLKPYPMNHG-- 238
Query: 163 TGGQGDMDWLQMVQPVIQERIE-RYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERI- 220
G + DW + V+ ER+ + +IRFNLMAV+ +R+ T +LK + + +
Sbjct: 239 -GWEDSEDWTDKFRRVMAERLGIATGEQDIRFNLMAVVPDRRIAITHKLKMLRTNQAIVS 297
Query: 221 --LQQL--ASLQSER-------------MVDKTSFEA--LNKSLSEVNAGIEGATEKILM 261
LQ+L A Q E +++ ++F A L L ++ I + +
Sbjct: 298 GTLQKLLKADEQGESGNGDSQRPDTPTTLLEPSAFTARDLQSLLKNLDTEIAINEQHLAD 357
Query: 262 EEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 303
E ++ ++ + RR HNY F+ FL +LA + L L+ +
Sbjct: 358 ENDRRHMFKVDASRRTHNYDKFICTFLSMLAHQGVLGELVSQ 399
>sp|B4P6P6|CALYP_DROYA Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila yakuba
GN=calypso PE=3 SV=1
Length = 471
Score = 162 bits (410), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/342 (33%), Positives = 178/342 (52%), Gaps = 51/342 (14%)
Query: 3 MQVEELYSLDLDSLNNLRPV---YGLIFLFKW--------RPGEKDDRVVIKDPNP--NL 49
+QVEE+Y L +P+ YG IFLF+W + E + +KD ++
Sbjct: 68 VQVEEVYDLQ-------KPIESPYGFIFLFRWIEERRARRKIVETTAEIFVKDEEAISSI 120
Query: 50 FFASQVINNACATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIR 107
FFA QV+ N+CAT A+LS+LLNC ++ +G LS+LK TK PE KGLAI N+ +
Sbjct: 121 FFAQQVVPNSCATHALLSVLLNCNENNLQLGDTLSRLKAHTKGMSPENKGLAIGNTPELA 180
Query: 108 AAHNSFARPEPFVPEEQKAAGKDD-----DVYHFISYIPVDGVLYELDGLKEGPISLGPC 162
AHNS A P+ E+ AG + +HF+S++P++G L+ELDGLK P++ G
Sbjct: 181 CAHNSHAMPQARRRLERTGAGVSSCRFTGEAFHFVSFVPINGQLFELDGLKPYPMNHG-- 238
Query: 163 TGGQGDMDWLQMVQPVIQERIE-RYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERI- 220
G + DW + V+ ER+ + +IRFNLMAV+ +R+ T +LK + + +
Sbjct: 239 -GWEDSEDWTDKFRRVMAERLGIATGEQDIRFNLMAVVPDRRIAITHKLKMLRTNQAIVS 297
Query: 221 --LQQL--ASLQSER-------------MVDKTSFEA--LNKSLSEVNAGIEGATEKILM 261
LQ+L A Q E +++ ++F A L L ++ I + +
Sbjct: 298 GTLQKLLKADEQGESGNGDSQRPDTPTTLLEPSAFTARDLQSLLKNLDTEIAINEQHLAD 357
Query: 262 EEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 303
E ++ ++ + RR HNY F+ FL +LA + L L+ +
Sbjct: 358 ENDRRHMFKVDASRRTHNYDKFICTFLSMLAHQGVLGELVSQ 399
>sp|Q7K5N4|CALYP_DROME Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
melanogaster GN=calypso PE=1 SV=1
Length = 471
Score = 162 bits (409), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/342 (33%), Positives = 178/342 (52%), Gaps = 51/342 (14%)
Query: 3 MQVEELYSLDLDSLNNLRPV---YGLIFLFKW--------RPGEKDDRVVIKDPNP--NL 49
+QVEE+Y L +P+ YG IFLF+W + E + +KD ++
Sbjct: 68 VQVEEVYDLQ-------KPIESPYGFIFLFRWIEERRARRKIVETTAEIFVKDEEAISSI 120
Query: 50 FFASQVINNACATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIR 107
FFA QV+ N+CAT A+LS+LLNC ++ +G LS+LK TK PE KGLAI N+ +
Sbjct: 121 FFAQQVVPNSCATHALLSVLLNCNENNLQLGDTLSRLKTHTKGMSPENKGLAIGNTPELA 180
Query: 108 AAHNSFARPEPFVPEEQKAAGKDD-----DVYHFISYIPVDGVLYELDGLKEGPISLGPC 162
AHNS A P+ E+ AG + +HF+S++P++G L+ELDGLK P++ G
Sbjct: 181 CAHNSHAMPQARRRLERTGAGVSSCRFTGEAFHFVSFVPINGQLFELDGLKPYPMNHG-- 238
Query: 163 TGGQGDMDWLQMVQPVIQERIE-RYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERI- 220
G + DW + V+ ER+ + +IRFNLMAV+ +R+ T +LK + + +
Sbjct: 239 -GWEDSEDWTDKFRRVMAERLGIATGEQDIRFNLMAVVPDRRIAITHKLKMLRTNQAIVS 297
Query: 221 --LQQL--ASLQSER-------------MVDKTSFEA--LNKSLSEVNAGIEGATEKILM 261
LQ+L A Q E +++ ++F A L L ++ I + +
Sbjct: 298 GTLQKLLKADEQGESGNGDSQRPDTPTTLLEPSAFTARDLQSLLKNLDTEIAINEQHLAD 357
Query: 262 EEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 303
E ++ ++ + RR HNY F+ FL +LA + L L+ +
Sbjct: 358 ENDRRHMFKVDASRRTHNYDKFICTFLSMLAHQGVLGELVSQ 399
>sp|B4HST0|CALYP_DROSE Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
sechellia GN=calypso PE=3 SV=1
Length = 471
Score = 162 bits (409), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 113/342 (33%), Positives = 178/342 (52%), Gaps = 51/342 (14%)
Query: 3 MQVEELYSLDLDSLNNLRPV---YGLIFLFKW--------RPGEKDDRVVIKDPNP--NL 49
+QVEE+Y L +P+ YG IFLF+W + E + +KD ++
Sbjct: 68 VQVEEVYDLQ-------KPIESPYGFIFLFRWIEERRARRKIVETTAEIFVKDEEAISSI 120
Query: 50 FFASQVINNACATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIR 107
FFA QV+ N+CAT A+LS+LLNC ++ +G LS+LK TK PE KGLAI N+ +
Sbjct: 121 FFAQQVVPNSCATHALLSVLLNCNENNLQLGDTLSRLKTHTKGMSPENKGLAIGNTPELA 180
Query: 108 AAHNSFARPEPFVPEEQKAAGKDD-----DVYHFISYIPVDGVLYELDGLKEGPISLGPC 162
AHNS A P+ E+ AG + +HF+S++P++G L+ELDGLK P++ G
Sbjct: 181 CAHNSHAMPQARRRLERTGAGVSSCRFTGEAFHFVSFVPINGQLFELDGLKPYPMNHG-- 238
Query: 163 TGGQGDMDWLQMVQPVIQERIE-RYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERI- 220
G + DW + V+ ER+ + +IRFNLMAV+ +R+ T +LK + + +
Sbjct: 239 -GWEDSEDWTDKFRRVMAERLGIATGEQDIRFNLMAVVPDRRIAITHKLKMLRTNQAIVS 297
Query: 221 --LQQL--ASLQSER-------------MVDKTSFEA--LNKSLSEVNAGIEGATEKILM 261
LQ+L A Q E +++ ++F A L L ++ I + +
Sbjct: 298 GTLQKLLKADEQGESGNGDSQRPDTPTTLLEPSAFTARDLQSLLKNLDTEIAINEQHLTD 357
Query: 262 EEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 303
E ++ ++ + RR HNY F+ FL +LA + L L+ +
Sbjct: 358 ENDRRHMFKVDASRRTHNYDKFICTFLSMLAHQGVLGELVSQ 399
>sp|B3NPV7|CALYP_DROER Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila erecta
GN=calypso PE=3 SV=1
Length = 471
Score = 161 bits (407), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 113/342 (33%), Positives = 178/342 (52%), Gaps = 51/342 (14%)
Query: 3 MQVEELYSLDLDSLNNLRPV---YGLIFLFKW--------RPGEKDDRVVIKDPNP--NL 49
+QVEE+Y L +P+ YG IFLF+W + E + +KD ++
Sbjct: 68 VQVEEVYDLQ-------KPIESPYGFIFLFRWIEERRARRKIVETTAEIFVKDEEAISSI 120
Query: 50 FFASQVINNACATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIR 107
FFA QV+ N+CAT A+LS+LLNC ++ +G LS+LK TK PE KGLAI N+ +
Sbjct: 121 FFAQQVVPNSCATHALLSVLLNCNENNLQLGDTLSRLKVHTKGMSPENKGLAIGNTPELA 180
Query: 108 AAHNSFARPEPFVPEEQKAAGKDD-----DVYHFISYIPVDGVLYELDGLKEGPISLGPC 162
AHNS A P+ E+ AG + +HF+S++P++G L+ELDGLK P++ G
Sbjct: 181 CAHNSHAMPQARRRLERTGAGVSSCRFTGEAFHFVSFVPINGQLFELDGLKPYPMNHG-- 238
Query: 163 TGGQGDMDWLQMVQPVIQERIE-RYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERI- 220
G + DW + V+ ER+ + +IRFNLMAV+ +R+ T +LK + + +
Sbjct: 239 -GWEDSEDWTDKFRRVMAERLGIATGEQDIRFNLMAVVPDRRIAITHKLKMLRTNQAIVS 297
Query: 221 --LQQL--ASLQSER-------------MVDKTSFEA--LNKSLSEVNAGIEGATEKILM 261
LQ+L A Q E +++ ++F A L L ++ I + +
Sbjct: 298 GTLQKLLKADEQGESGNGDSQRPDTPTTLLEPSAFTARDLQSLLKNLDTEIAINEQHLAD 357
Query: 262 EEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 303
E ++ ++ + RR HNY F+ FL +LA + L L+ +
Sbjct: 358 ENDRRHMFKVDASRRTHNYDKFICTFLSMLAHQGVLGELVSQ 399
>sp|B4LQ24|CALYP_DROVI Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila virilis
GN=calypso PE=3 SV=1
Length = 462
Score = 160 bits (406), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 114/340 (33%), Positives = 180/340 (52%), Gaps = 49/340 (14%)
Query: 3 MQVEELYSLDLDSLNNLRPV---YGLIFLFKW--------RPGEKDDRVVIKDPNP--NL 49
+QVEE+Y L +P+ YG IFLF+W + E + +KD ++
Sbjct: 52 VQVEEVYDLQ-------KPIESPYGFIFLFRWIEERRARRKIVETTAEIFVKDEEAISSI 104
Query: 50 FFASQVINNACATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIR 107
FFA QV+ N+CAT A+LS+LLNC ++ +G LS+LK TK PE KGLAI N+ +
Sbjct: 105 FFAQQVVPNSCATHALLSVLLNCNENNLQLGETLSRLKAHTKGMSPENKGLAIGNTPELA 164
Query: 108 AAHNSFARPEPFVPEEQKAAGK-----DDDVYHFISYIPVDGVLYELDGLKEGPISLGPC 162
AHNS A P+ E+ AG + +HF+S++P++G L+ELDGLK P++ G C
Sbjct: 165 CAHNSHAMPQARRRLERTGAGVASCRFTGEAFHFVSFVPINGQLFELDGLKPYPMNHG-C 223
Query: 163 TGGQGDMDWLQMVQPVIQERIE-RYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERI- 220
+ DW + V+ ER+ + +IRFNLMAV+ +R+ T +LK + + +
Sbjct: 224 W--EEHEDWTDKFRRVMAERLGIATGEQDIRFNLMAVVPDRRIAITHKLKMLRTNQAIVS 281
Query: 221 --LQQL--ASLQSER-----------MVDKTSFEA--LNKSLSEVNAGIEGATEKILMEE 263
LQ+L A Q ER +++ ++F A L L ++ I + + E
Sbjct: 282 GTLQKLLKADEQGERDEQQRPDTPNTLLEPSAFTARDLQSLLKNLDTEIAINEQHLADEN 341
Query: 264 EKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 303
++ + ++ + RR HNY F+ FL +LA + L L+ +
Sbjct: 342 DRRQMFKVDASRRTHNYDKFICTFLTMLAHQGVLGELVSQ 381
>sp|B4JW98|CALYP_DROGR Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
grimshawi GN=calypso PE=3 SV=1
Length = 462
Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/340 (33%), Positives = 179/340 (52%), Gaps = 49/340 (14%)
Query: 3 MQVEELYSLDLDSLNNLRPV---YGLIFLFKW--------RPGEKDDRVVIKDPNP--NL 49
+QVEE+Y L +P+ YG IFLF+W + E + +KD ++
Sbjct: 52 VQVEEVYDLQ-------KPIESPYGFIFLFRWIEERRARRKIVETTAEIFVKDEEAISSI 104
Query: 50 FFASQVINNACATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIR 107
FFA QV+ N+CAT A+LS+LLNC ++ +G L +LK TK PE KGLAI N+ +
Sbjct: 105 FFAQQVVPNSCATHALLSVLLNCNENNLQLGETLGRLKAHTKGMSPENKGLAIGNTPELA 164
Query: 108 AAHNSFARPEPFVPEEQKAAGK-----DDDVYHFISYIPVDGVLYELDGLKEGPISLGPC 162
AHNS A P+ E+ AG + +HF+S++P++G L+ELDGLK P++ G C
Sbjct: 165 CAHNSHAMPQARRRLERTGAGVASCRFTGEAFHFVSFVPINGQLFELDGLKPYPMNHG-C 223
Query: 163 TGGQGDMDWLQMVQPVIQERIE-RYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERI- 220
+ DW + V+ ER+ + +IRFNLMAV+ +R+ T +LK + + +
Sbjct: 224 W--EEHEDWTDKFRRVMAERLGIATGEQDIRFNLMAVVPDRRIAITHKLKMLRTNQAIVS 281
Query: 221 --LQQL--ASLQSER-----------MVDKTSFEA--LNKSLSEVNAGIEGATEKILMEE 263
LQ+L A Q ER +++ ++F A L L ++ I + + E
Sbjct: 282 GTLQKLLKADEQGERDEQQRPDTPTTLLEPSAFTARDLQSLLKNLDTEIAINEQHLADEN 341
Query: 264 EKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 303
++ + ++ + RR HNY F+ FL +LA + L L+ +
Sbjct: 342 DRRQMFKVDASRRTHNYDKFICTFLSMLAHQGVLGELVSQ 381
>sp|Q17N72|CALYP_AEDAE Ubiquitin carboxyl-terminal hydrolase calypso OS=Aedes aegypti
GN=calypso PE=3 SV=1
Length = 478
Score = 159 bits (401), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/255 (37%), Positives = 142/255 (55%), Gaps = 20/255 (7%)
Query: 3 MQVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDDR-------VVIKDPNP--NLFFAS 53
+QVEE+Y L N PVYG IFLF+W + R + +KD N+FFA
Sbjct: 34 VQVEEIYDL---QKNIEGPVYGFIFLFRWIEERRARRKIVETTEIYVKDEEAVNNIFFAQ 90
Query: 54 QVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSF 113
QV+ N+CAT A+LS+LLNC DID+G LS+LK TK PE KG AI N+ + AHNS
Sbjct: 91 QVVPNSCATHALLSVLLNCSDIDLGNTLSRLKVHTKGMCPENKGWAIGNTPELACAHNSH 150
Query: 114 ARPEPFVPEEQKAA---GK-DDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDM 169
A P+ ++ + G+ + +HF+S++P++G L+ELDGLK P+ GP +
Sbjct: 151 AMPQARRRMDRNSGVSTGRFTGEAFHFVSFVPINGHLFELDGLKPFPMDHGPWGEKEA-- 208
Query: 170 DWLQMVQPVIQERIE-RYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERILQQLASLQ 228
W + V+ +R+ + +IRFNLMAV+ +R+ T +LK + + + L L
Sbjct: 209 -WTDKFRRVMSDRLGISTGEQDIRFNLMAVVPDRRIAITHKLKMLRTNQTIVSAALEKLL 267
Query: 229 SERMVDKTSFEALNK 243
+ + S E ++K
Sbjct: 268 KSKRTESRSLETVDK 282
>sp|Q291J4|CALYP_DROPS Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
pseudoobscura pseudoobscura GN=calypso PE=3 SV=1
Length = 475
Score = 157 bits (398), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 113/342 (33%), Positives = 177/342 (51%), Gaps = 51/342 (14%)
Query: 3 MQVEELYSLDLDSLNNLRPV---YGLIFLFKW--------RPGEKDDRVVIKDPNP--NL 49
+QVEE+Y L +P+ YG IFLF+W + E + +KD ++
Sbjct: 67 VQVEEVYDLQ-------KPIESPYGFIFLFRWIEERRARRKIVETTAEIFVKDEEAISSI 119
Query: 50 FFASQVINNACATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIR 107
FFA QV+ N+CAT A+LS+LLNC ++ +G LS+LK TK PE KGLAI N+ +
Sbjct: 120 FFAQQVVPNSCATHALLSVLLNCNENNLQLGDTLSRLKVHTKGMSPENKGLAIGNTPELA 179
Query: 108 AAHNSFARPEPFVPEEQKAAGK-----DDDVYHFISYIPVDGVLYELDGLKEGPISLGPC 162
AHNS A P+ E+ AG + +HF+S++P+ G L+ELDGLK P++ G
Sbjct: 180 CAHNSHAIPQARRRLERTGAGVASCRFTGEAFHFVSFVPISGQLFELDGLKPYPMNHG-- 237
Query: 163 TGGQGDMDWLQMVQPVIQERIE-RYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERI- 220
G + DW + V+ ER+ + +IRFNLMAV+ +R+ T +LK + + +
Sbjct: 238 -GWEDHEDWTDKFRRVMAERLGIATGEQDIRFNLMAVVPDRRIAITHKLKMLRTNQAIVS 296
Query: 221 --LQQL--ASLQSER-------------MVDKTSFEA--LNKSLSEVNAGIEGATEKILM 261
LQ+L A Q E +++ ++F A L L ++ I + +
Sbjct: 297 GTLQKLLKADEQGESGNGDQQRPDTPTTLLEPSAFTAKDLQLLLKNLDTEIAINEQNLAD 356
Query: 262 EEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 303
E ++ ++ + RR HNY F+ FL +LA + L L+ +
Sbjct: 357 ENDRRHMFKVDASRRTHNYDKFICTFLSMLAHQGVLGELVSQ 398
>sp|B4GAM2|CALYP_DROPE Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
persimilis GN=calypso PE=3 SV=1
Length = 475
Score = 157 bits (398), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 113/342 (33%), Positives = 177/342 (51%), Gaps = 51/342 (14%)
Query: 3 MQVEELYSLDLDSLNNLRPV---YGLIFLFKW--------RPGEKDDRVVIKDPNP--NL 49
+QVEE+Y L +P+ YG IFLF+W + E + +KD ++
Sbjct: 67 VQVEEVYDLQ-------KPIESPYGFIFLFRWIEERRARRKIVETTAEIFVKDEEAISSI 119
Query: 50 FFASQVINNACATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIR 107
FFA QV+ N+CAT A+LS+LLNC ++ +G LS+LK TK PE KGLAI N+ +
Sbjct: 120 FFAQQVVPNSCATHALLSVLLNCNENNLQLGDTLSRLKVHTKGMSPENKGLAIGNTPELA 179
Query: 108 AAHNSFARPEPFVPEEQKAAGK-----DDDVYHFISYIPVDGVLYELDGLKEGPISLGPC 162
AHNS A P+ E+ AG + +HF+S++P+ G L+ELDGLK P++ G
Sbjct: 180 CAHNSHAIPQARRRLERTGAGVASCRFTGEAFHFVSFVPISGQLFELDGLKPYPMNHG-- 237
Query: 163 TGGQGDMDWLQMVQPVIQERIE-RYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERI- 220
G + DW + V+ ER+ + +IRFNLMAV+ +R+ T +LK + + +
Sbjct: 238 -GWEDHEDWTDKFRRVMAERLGIATGEQDIRFNLMAVVPDRRIAITHKLKMLRTNQAIVS 296
Query: 221 --LQQL--ASLQSER-------------MVDKTSFEA--LNKSLSEVNAGIEGATEKILM 261
LQ+L A Q E +++ ++F A L L ++ I + +
Sbjct: 297 GTLQKLLKADEQGESGNGDQQRPDTPTTLLEPSAFTAKDLQLLLKNLDTEIAINEQNLAD 356
Query: 262 EEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 303
E ++ ++ + RR HNY F+ FL +LA + L L+ +
Sbjct: 357 ENDRRHMFKVDASRRTHNYDKFICTFLSMLAHQGVLGELVSQ 398
>sp|B4KT51|CALYP_DROMO Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
mojavensis GN=calypso PE=3 SV=1
Length = 461
Score = 156 bits (395), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/338 (32%), Positives = 177/338 (52%), Gaps = 47/338 (13%)
Query: 3 MQVEELYSLDLDSLNNLRPV---YGLIFLFKW--------RPGEKDDRVVIKDPNP--NL 49
+QVEE+Y L +P+ YG IFLF+W + E + +KD ++
Sbjct: 52 VQVEEVYDLQ-------KPIESPYGFIFLFRWIEERRARRKIVETTAEIFVKDEEAISSI 104
Query: 50 FFASQVINNACATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKGLAINNSDAIR 107
FFA QV+ N+CAT A+LS+LLNC ++ +G LS+LK TK PE KGLAI N+ +
Sbjct: 105 FFAQQVVPNSCATHALLSVLLNCNENNLQLGETLSRLKAHTKGMSPENKGLAIGNTPELA 164
Query: 108 AAHNSFARPEPFVPEEQKAAGK-----DDDVYHFISYIPVDGVLYELDGLKEGPISLGPC 162
AHNS A P+ E+ AG + +HF+S++P++G L+ELDGLK P++ G C
Sbjct: 165 CAHNSHAMPQARRRLERTGAGVASCRFTGEAFHFVSFVPINGQLFELDGLKPYPMNHG-C 223
Query: 163 TGGQGDMDWLQMVQPVIQERIE-RYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRERI- 220
+ DW + V+ +R+ + +IRFNLMAV+ +R+ T +LK + + +
Sbjct: 224 W--EEHEDWTDKFRRVMADRLGIATGEQDIRFNLMAVVPDRRIAITHKLKMLRTNQAIVS 281
Query: 221 --LQQLASLQSE-----------RMVDKTSFEA--LNKSLSEVNAGIEGATEKILMEEEK 265
LQ+L + +++ ++F A L L ++ I + + E ++
Sbjct: 282 GTLQKLLKADEQGDDQQRPDTPNTLLEPSAFTARDLQSLLKNLDTEIAINEQHLADENDR 341
Query: 266 FKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 303
+ ++ + RR HNY F+ FL +LA + L L+ +
Sbjct: 342 RQMFKVDASRRTHNYDKFICTFLSMLAHQGVLGELVSQ 379
>sp|B0W2R4|CALYP_CULQU Ubiquitin carboxyl-terminal hydrolase calypso OS=Culex
quinquefasciatus GN=calypso PE=3 SV=1
Length = 470
Score = 139 bits (349), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 176/387 (45%), Gaps = 94/387 (24%)
Query: 3 MQVEELYSLDLDSLNNLRPVYGLIFLFKW--------RPGEKDDRVVIKDPNP--NLFFA 52
+QVEE+Y L ++ PV+G IFLF+W + E + +KD ++FFA
Sbjct: 34 VQVEEIYDLQ-KTIEG--PVFGFIFLFRWIEERRARRKIVETTTEMYVKDEEAVNSIFFA 90
Query: 53 SQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNS 112
QV+ N+CAT A+LS+LLNC DID+G LS+LK TK P+ KG AI N+ + AHNS
Sbjct: 91 HQVVPNSCATHALLSVLLNCSDIDLGTTLSRLKVHTKGMCPDNKGWAIGNTPELACAHNS 150
Query: 113 FARPEPFVPEEQKAA---GK-DDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGD 168
A P+ ++ + G+ + +HF+S+ P++G L+ELDGLK P+ GP G+ +
Sbjct: 151 HAMPQARRRMDRNSGVSTGRFTGEAFHFVSFCPINGHLFELDGLKPFPMDHGPW--GEKE 208
Query: 169 MDWLQMVQPVIQER-------------------------------------IERYSKSEI 191
DW + V+ +R +E S++EI
Sbjct: 209 -DWTDKFRRVMSDRLGISTDRRIAITHKLKMLRTNQTIVSAALEKLLKSKQLESRSQAEI 267
Query: 192 RFNLMAVIKNRKELYT------AELKEFQRKRE------RILQQLASLQSE----RMVDK 235
R + + K +E ++L E K E + L+ L SL S ++ +
Sbjct: 268 RETVDKIKKEEQESTVKLSSEYSQLLEMHEKDEPAVAMSKELESLVSLNSSSDSVEIIGE 327
Query: 236 TSFEALNKSLSEVNAGIEGAT---------------------EKILMEEEKFKKWRTENI 274
T + N S A I T + + E EK ++ ++
Sbjct: 328 TEIKKENPPPSPPPAFIGAGTFSPKDLLSLLKNLESEINITEQHLCDENEKRAMFKVDDC 387
Query: 275 RRKHNYIPFLFNFLKILAEKKQLKPLI 301
RR HNY F+ FL +LA + +L L+
Sbjct: 388 RRTHNYDEFICTFLSMLAYQGELGDLV 414
>sp|P35122|UCHL_DROME Ubiquitin carboxyl-terminal hydrolase OS=Drosophila melanogaster
GN=Uch PE=2 SV=2
Length = 227
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 105/206 (50%), Gaps = 24/206 (11%)
Query: 5 VEELYSLDLDSLNNL-RPVYGLIFLF-------KWRPGEKDDRVVIKDPNP-NLFFASQV 55
V ++ L+ D+L + RPV I LF K R E D +++ +P +LF+ Q
Sbjct: 29 VTDVIGLEDDTLEWIPRPVKAFILLFPCSETYEKHRAEEHDRIKEVEEQHPEDLFYMRQF 88
Query: 56 INNACATQAILSILLNCPDIDIGPELSKLKEF---TKNFPPELKGLAINNSDAIRAAHNS 112
+NAC T A++ + N ++DI + LK+F T + PE +G A+ + A H +
Sbjct: 89 THNACGTVALIHSVANNKEVDI--DRGVLKDFLEKTASLSPEERGRALEKDEKFTADHEA 146
Query: 113 FARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWL 172
A+ + AA + ++HFI+ + +G LYELDG K PI GP + + ++
Sbjct: 147 LAQEG-----QTNAANHEKVIHHFIALVNKEGTLYELDGRKSFPIKHGPTS----EETFV 197
Query: 173 QMVQPVIQERIERYSKSEIRFNLMAV 198
+ V +E + R +E+RF ++A+
Sbjct: 198 KDAAKVCKEFMAR-DPNEVRFTVLAL 222
>sp|Q2TBG8|UCHL3_BOVIN Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Bos taurus
GN=UCHL3 PE=2 SV=1
Length = 230
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 23/208 (11%)
Query: 4 QVEELYSLDLDSLNNL-RPVYGLIFLF----KWRPGEKDDRVVIK----DPNPNLFFASQ 54
Q ++Y +D + L+ + RPV ++ LF K+ ++ IK D +++F Q
Sbjct: 30 QFVDVYGMDPELLSMVPRPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQDVTSSVYFMKQ 89
Query: 55 VINNACATQAILSILLNCPD---IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHN 111
I+NAC T ++ + N D + G L K E + + PE + + N DAIR H
Sbjct: 90 TISNACGTIGLIHAIANNKDKMHFESGSTLKKFLEESASMSPEERARYLENYDAIRVTHE 149
Query: 112 SFARPEPFVPEEQKAAGKDDDV-YHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMD 170
+ A + +A D+ V HFI+ + VDG LYELDG K PI+ G + D
Sbjct: 150 TSAHEG-----QTEAPNIDEKVDLHFIALVHVDGHLYELDGRKPFPINHGETS----DET 200
Query: 171 WLQMVQPVIQERIERYSKSEIRFNLMAV 198
L+ V ++ +ER E+RFN +A+
Sbjct: 201 LLEDAIEVCKKFMER-DPDELRFNAIAL 227
>sp|P15374|UCHL3_HUMAN Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Homo sapiens
GN=UCHL3 PE=1 SV=1
Length = 230
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 23/208 (11%)
Query: 4 QVEELYSLDLDSLNNL-RPVYGLIFLF----KWRPGEKDDRVVIK----DPNPNLFFASQ 54
Q ++Y +D + L+ + RPV ++ LF K+ ++ IK D +++F Q
Sbjct: 30 QFVDVYGMDPELLSMVPRPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQDVTSSVYFMKQ 89
Query: 55 VINNACATQAILSILLNCPD---IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHN 111
I+NAC T ++ + N D + G L K E + + PE + + N DAIR H
Sbjct: 90 TISNACGTIGLIHAIANNKDKMHFESGSTLKKFLEESVSMSPEERARYLENYDAIRVTHE 149
Query: 112 SFARPEPFVPEEQKAAGKDDDV-YHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMD 170
+ A + +A D+ V HFI+ + VDG LYELDG K PI+ G + D
Sbjct: 150 TSAHEG-----QTEAPSIDEKVDLHFIALVHVDGHLYELDGRKPFPINHGETS----DET 200
Query: 171 WLQMVQPVIQERIERYSKSEIRFNLMAV 198
L+ V ++ +ER E+RFN +A+
Sbjct: 201 LLEDAIEVCKKFMER-DPDELRFNAIAL 227
>sp|Q9JKB1|UCHL3_MOUSE Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Mus musculus
GN=Uchl3 PE=1 SV=2
Length = 230
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 23/208 (11%)
Query: 4 QVEELYSLDLDSLNNL-RPVYGLIFLF----KWRPGEKDDRVVIK----DPNPNLFFASQ 54
Q ++Y ++ + L+ + RPV ++ LF K+ ++ IK D +++F Q
Sbjct: 30 QFVDVYGMEPELLSMVPRPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQDVTSSVYFMKQ 89
Query: 55 VINNACATQAILSILLNCPD---IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHN 111
I+NAC T ++ + N D + G L K E + + PE + + N DAIR H
Sbjct: 90 TISNACGTIGLIHAIANNKDKMHFESGSTLKKFLEESVSMSPEERAKFLENYDAIRVTHE 149
Query: 112 SFARPEPFVPEEQKAAGKDDDV-YHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMD 170
+ A + +A D+ V HFI+ + VDG LYELDG K PI+ G + D
Sbjct: 150 TSAHEG-----QTEAPSIDEKVDLHFIALVHVDGHLYELDGRKPFPINHGKTS----DET 200
Query: 171 WLQMVQPVIQERIERYSKSEIRFNLMAV 198
L+ V ++ +ER E+RFN +A+
Sbjct: 201 LLEDAIEVCKKFMER-DPDELRFNAIAL 227
>sp|Q91Y78|UCHL3_RAT Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Rattus
norvegicus GN=Uchl3 PE=1 SV=1
Length = 230
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 23/208 (11%)
Query: 4 QVEELYSLDLDSLNNL-RPVYGLIFLF----KWRPGEKDDRVVIK----DPNPNLFFASQ 54
Q ++Y ++ + L+ + RPV ++ LF K+ ++ IK D +++F Q
Sbjct: 30 QFVDVYGMEPELLSMVPRPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQDVTSSVYFMKQ 89
Query: 55 VINNACATQAILSILLNCPD---IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHN 111
I+NAC T ++ + N D + G L K E + PE + + N DAIR H
Sbjct: 90 TISNACGTIGLIHAIANNKDKMHFESGSALKKFLEESVAMSPEERARHLENYDAIRVTHE 149
Query: 112 SFARPEPFVPEEQKAAGKDDDV-YHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMD 170
+ A + +A D+ V HFI+ + VDG LYELDG K PI+ G + D
Sbjct: 150 TSAHEG-----QTEAPSIDEKVDLHFIALVHVDGHLYELDGRKPFPINHGKTS----DET 200
Query: 171 WLQMVQPVIQERIERYSKSEIRFNLMAV 198
L+ V ++ +ER E+RFN +A+
Sbjct: 201 LLEDAIEVCKKFMER-DPDELRFNAIAL 227
>sp|Q60HC8|UCHL1_MACFA Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Macaca
fascicularis GN=UCHL1 PE=2 SV=1
Length = 223
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 99/204 (48%), Gaps = 22/204 (10%)
Query: 7 ELYSLDLDSLNNL-RPVYGLIFLFKWRPGEKDDR------VVIKDPNPNLFFASQVINNA 59
++ L+ DSL ++ P L+ LF ++ R + ++ +P ++F Q I N+
Sbjct: 30 DVLGLEEDSLGSVPAPACALLLLFPLTAQHENFRKKQIEELKGQEVSPKVYFMKQTIGNS 89
Query: 60 CATQAILSILLNCPDIDIGPELSKLKEF---TKNFPPELKGLAINNSDAIRAAHNSFARP 116
C T ++ + N D + S LK+F T+ PE + ++AI+AAH++
Sbjct: 90 CGTIGLIHAVANNQDKLGFEDGSVLKQFLSETEKMSPEDRAKCFEKNEAIQAAHDA---- 145
Query: 117 EPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQ 176
V +E + D +HFI + VDG LYELDG P++ G + G LQ
Sbjct: 146 ---VAQEGQCRVDDKVNFHFILFNNVDGHLYELDGRMPFPVNHGASSEGT----LLQDAA 198
Query: 177 PVIQERIERYSKSEIRFNLMAVIK 200
V +E ER + E+RF+ +A+ K
Sbjct: 199 KVCREFTER-EQGEVRFSAVALCK 221
>sp|P58321|UCHL4_MOUSE Ubiquitin carboxyl-terminal hydrolase isozyme L4 OS=Mus musculus
GN=Uchl4 PE=1 SV=1
Length = 233
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 26/211 (12%)
Query: 4 QVEELYSLDLDSLNNL-RPVYGLIFLF----KWRPGEKDDRVVIK----DPNPNLFFASQ 54
Q ++Y ++ + L+ + RPV ++ LF K+ ++ IK D +++F Q
Sbjct: 30 QFVDVYGMESELLSIIPRPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQDVTSSVYFMKQ 89
Query: 55 VINNACATQAILSILLNCPD------IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRA 108
I+NAC T + ++ + + G L K E + + PE + + N DAIR
Sbjct: 90 TISNACGTIGTIGLIHAIANNKDKVHFESGSTLKKFLEESVSMSPEERAKYLENYDAIRV 149
Query: 109 AHNSFARPEPFVPEEQKAAGKDDDV-YHFISYIPVDGVLYELDGLKEGPISLGPCTGGQG 167
H + A + +A D+ V HFI+ + VDG LYELDG K PI+ G +
Sbjct: 150 THETSAHEG-----QTEAPSIDEKVDLHFIALVHVDGHLYELDGWKPFPINHGKTS---- 200
Query: 168 DMDWLQMVQPVIQERIERYSKSEIRFNLMAV 198
D L+ V V ++ +ER E+RFN +A+
Sbjct: 201 DETLLEDVIKVCKKFMER-DPDELRFNAIAL 230
>sp|Q6SEG5|UCHL1_PIG Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Sus scrofa
GN=UCHL1 PE=2 SV=1
Length = 223
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 22/209 (10%)
Query: 2 HMQVEELYSLDLDSLNNL-RPVYGLIFLFKWRPGEKDDR------VVIKDPNPNLFFASQ 54
H + ++ L+ +SL ++ P L+ LF ++ R + ++ +P ++F Q
Sbjct: 25 HWRFADVLGLEEESLGSVPAPACALLLLFPLTAQHENFRKKQIEELKGQEVSPKVYFMKQ 84
Query: 55 VINNACATQAILSILLNCPDIDIGPELSKLKEF---TKNFPPELKGLAINNSDAIRAAHN 111
I N+C T ++ + N D + S LK+F T+ PE + ++AI+AAH+
Sbjct: 85 TIGNSCGTIGLIHAVANNQDKLEFEDGSVLKQFLSETEKLSPEDRAKCFEKNEAIQAAHD 144
Query: 112 SFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDW 171
+ V +E + D +HFI + VDG LYELDG P++ G +
Sbjct: 145 A-------VAQEGQCRVDDKVNFHFILFNNVDGHLYELDGRMPFPVN----HGASSEDSL 193
Query: 172 LQMVQPVIQERIERYSKSEIRFNLMAVIK 200
LQ V +E ER + E+RF+ +A+ K
Sbjct: 194 LQDAAKVCREFTER-EQGEVRFSAVALCK 221
>sp|Q06AB3|UCHL3_PIG Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Sus scrofa
GN=UCHL3 PE=2 SV=1
Length = 230
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 102/208 (49%), Gaps = 23/208 (11%)
Query: 4 QVEELYSLDLDSLNNL-RPVYGLIFLF----KWRPGEKDDRVVIK----DPNPNLFFASQ 54
Q ++Y +D + L+ + RPV ++ LF K+ ++ IK D P+++F Q
Sbjct: 30 QFVDVYGMDPELLSMVPRPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQDVTPSVYFMKQ 89
Query: 55 VINNACATQAILSILLNCPD---IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHN 111
I+NAC T ++ + N + + G L K E + + P+ + + + DAI H
Sbjct: 90 TISNACGTIGLIHAIANNKNKMHFESGSTLKKFLEESASMSPDERARYLESYDAIPVTHE 149
Query: 112 SFARPEPFVPEEQKAAGKDDDV-YHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMD 170
+ A + +A D+ V HFI+ + VDG LYELDG K PI+ G + D
Sbjct: 150 TSAHEG-----QTEAPNIDEKVDLHFIALVHVDGHLYELDGRKPFPINHGETS----DET 200
Query: 171 WLQMVQPVIQERIERYSKSEIRFNLMAV 198
L+ V ++ +ER E+RFN +A+
Sbjct: 201 LLEDAIEVCKKFMER-DPDELRFNAIAL 227
>sp|Q00981|UCHL1_RAT Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Rattus
norvegicus GN=Uchl1 PE=1 SV=2
Length = 223
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 22/204 (10%)
Query: 7 ELYSLDLDSLNNL-RPVYGLIFLFKWRPGEKDDR------VVIKDPNPNLFFASQVINNA 59
++ L+ ++L ++ P L+ LF ++ R + ++ +P ++F Q I N+
Sbjct: 30 DVLGLEEETLGSVPSPACALLLLFPLTAQHENFRKKQIEELKGQEVSPKVYFMKQTIGNS 89
Query: 60 CATQAILSILLNCPDIDIGPELSKLKEF---TKNFPPELKGLAINNSDAIRAAHNSFARP 116
C T ++ + N D + S LK+F T+ PE + ++AI+AAH+S
Sbjct: 90 CGTIGLIHAVANNQDKLEFEDGSVLKQFLSETEKLSPEDRAKCFEKNEAIQAAHDS---- 145
Query: 117 EPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQ 176
V +E + D +HFI + VDG LYELDG P++ G + LQ
Sbjct: 146 ---VAQEGQCRVDDKVNFHFILFNNVDGHLYELDGRMPFPVN----HGASSEDSLLQDAA 198
Query: 177 PVIQERIERYSKSEIRFNLMAVIK 200
V +E ER + E+RF+ +A+ K
Sbjct: 199 KVCREFTER-EQGEVRFSAVALCK 221
>sp|Q9R0P9|UCHL1_MOUSE Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Mus musculus
GN=Uchl1 PE=1 SV=1
Length = 223
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 22/204 (10%)
Query: 7 ELYSLDLDSLNNL-RPVYGLIFLFKWRPGEKDDR------VVIKDPNPNLFFASQVINNA 59
++ L+ ++L ++ P L+ LF ++ R + ++ +P ++F Q I N+
Sbjct: 30 DVLGLEEETLGSVPSPACALLLLFPLTAQHENFRKKQIEELKGQEVSPKVYFMKQTIGNS 89
Query: 60 CATQAILSILLNCPDIDIGPELSKLKEF---TKNFPPELKGLAINNSDAIRAAHNSFARP 116
C T ++ + N D + S LK+F T+ PE + ++AI+AAH+S
Sbjct: 90 CGTIGLIHAVANNQDKLEFEDGSVLKQFLSETEKLSPEDRAKCFEKNEAIQAAHDS---- 145
Query: 117 EPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQ 176
V +E + D +HFI + VDG LYELDG P++ G + LQ
Sbjct: 146 ---VAQEGQCRVDDKVNFHFILFNNVDGHLYELDGRMPFPVN----HGASSEDSLLQDAA 198
Query: 177 PVIQERIERYSKSEIRFNLMAVIK 200
V +E ER + E+RF+ +A+ K
Sbjct: 199 KVCREFTER-EQGEVRFSAVALCK 221
>sp|P23356|UCHL1_BOVIN Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Bos taurus
GN=UCHL1 PE=1 SV=2
Length = 252
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 15/161 (9%)
Query: 43 KDPNPNLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEF---TKNFPPELKGLA 99
++ +P ++F Q I N+C T ++ + N D + S LK+F T+ PE +
Sbjct: 102 QEVSPKVYFMKQTIGNSCGTIGLIHAVANNQDKLEFEDGSVLKQFLSETEKLSPEDRAKC 161
Query: 100 INNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISL 159
++AI+AAH++ V +E + D +HFI + VDG LYELDG P++
Sbjct: 162 FEKNEAIQAAHDA-------VAQEGQCRVDDKVNFHFILFNNVDGHLYELDGRMPFPVNH 214
Query: 160 GPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIK 200
G + + LQ V +E ER + E+RF+ +A+ K
Sbjct: 215 GTSS----EDSLLQDAAKVCREFTER-EQGEVRFSAVALCK 250
>sp|P50103|UCHL1_MONDO Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Monodelphis
domestica GN=UCHL1 PE=3 SV=2
Length = 223
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 7 ELYSLDLDSLNNL-RPVYGLIFLFKWRPGEKDDR------VVIKDPNPNLFFASQVINNA 59
++ L+ D L + P L+ LF ++ R + ++ +P ++F Q + N+
Sbjct: 30 DVLGLEEDVLGTVPAPACALLLLFPLTAQHENFRKKQIEELKGQEVSPKVYFMKQTVGNS 89
Query: 60 CATQAILSILLNCPD---IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARP 116
C T ++ + N D D G L + T PE + ++AI+AAH++
Sbjct: 90 CGTIGLIHAVANNQDKLNFDDGSVLKQFISETAKLSPEDRAKCFEKNEAIQAAHDA---- 145
Query: 117 EPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQ 176
V +E + D+ +HFI + VDG LYELDG PI+ G D L+
Sbjct: 146 ---VAQEGQCRVDDEVNFHFILFNNVDGHLYELDGRMPFPIN----HGSNSDESVLKGAA 198
Query: 177 PVIQERIERYSKSEIRFNLMAVIK 200
+ ++ ER + E+RF+ +A+ K
Sbjct: 199 EICRQFTER-EEGEVRFSAVALCK 221
>sp|P09936|UCHL1_HUMAN Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Homo sapiens
GN=UCHL1 PE=1 SV=2
Length = 223
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 22/204 (10%)
Query: 7 ELYSLDLDSLNNL-RPVYGLIFLFKWRPGEKDDR------VVIKDPNPNLFFASQVINNA 59
++ L+ +SL ++ P L+ LF ++ R + ++ +P ++F Q I N+
Sbjct: 30 DVLGLEEESLGSVPAPACALLLLFPLTAQHENFRKKQIEELKGQEVSPKVYFMKQTIGNS 89
Query: 60 CATQAILSILLNCPDIDIGPELSKLKEF---TKNFPPELKGLAINNSDAIRAAHNSFARP 116
C T ++ + N D + S LK+F T+ PE + ++AI+AAH++
Sbjct: 90 CGTIGLIHAVANNQDKLGFEDGSVLKQFLSETEKMSPEDRAKCFEKNEAIQAAHDA---- 145
Query: 117 EPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQ 176
V +E + D +HFI + VDG LYELDG P++ G + L+
Sbjct: 146 ---VAQEGQCRVDDKVNFHFILFNNVDGHLYELDGRMPFPVN----HGASSEDTLLKDAA 198
Query: 177 PVIQERIERYSKSEIRFNLMAVIK 200
V +E ER + E+RF+ +A+ K
Sbjct: 199 KVCREFTER-EQGEVRFSAVALCK 221
>sp|Q9GM50|UCHL1_HORSE Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Equus caballus
GN=UCHL1 PE=2 SV=2
Length = 223
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 15/161 (9%)
Query: 43 KDPNPNLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEF---TKNFPPELKGLA 99
++ +P ++F Q I N+C T ++ + N D + S LK+F T+ PE +
Sbjct: 73 QEVSPKVYFMKQTIGNSCGTIGLIHAVANNQDKLEFEDGSVLKQFLSETEKLSPEDRAKC 132
Query: 100 INNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISL 159
++AI+AAH++ V +E + D +HFI + VDG LYELDG P++
Sbjct: 133 FEKNEAIQAAHDA-------VAQEGQCRVDDKVNFHFILFNNVDGHLYELDGRMPFPVN- 184
Query: 160 GPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIK 200
G + LQ V +E ER + E+RF+ +A+ K
Sbjct: 185 ---HGASSEDLLLQDAAKVCREFTER-EQGEVRFSAVALCK 221
>sp|Q54T48|UCHL_DICDI Probable ubiquitin carboxyl-terminal hydrolase OS=Dictyostelium
discoideum GN=uch1 PE=3 SV=1
Length = 255
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 49 LFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEF---TKNFPPELKGLAINNSDA 105
++F Q I NAC T ++ +LN ++ E K+F T + E + +++ +
Sbjct: 92 VYFMKQYIGNACGTIGVIHSVLNNANVIEFNENGFFKQFLDKTTSLSTEERAISLLKNSE 151
Query: 106 IRAAHN-SFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCTG 164
I +H S + + VP+E + V HF+S++ VDG LYELDG K I+ G +
Sbjct: 152 IEKSHEISALQGQSNVPQEDEPV-----VLHFVSFVHVDGHLYELDGRKPFAINHGESSA 206
Query: 165 GQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVI 199
D ++Q +I E EIRFNLM ++
Sbjct: 207 ETLLKDTANVLQKMIDE-----DPKEIRFNLMGLV 236
>sp|O01391|UCHL_APLCA Ubiquitin carboxyl-terminal hydrolase OS=Aplysia californica GN=UCH
PE=2 SV=1
Length = 214
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 24/171 (14%)
Query: 7 ELYSLDLDSLNNL-RPVYGLIFLFKWRPGEKDDRVVI--------KDPNPNLFFASQVIN 57
+++ LD + L + RP L+ LF DD+ + D +L++ Q I
Sbjct: 34 DVFGLDPELLAMVPRPAAALVLLFP------DDKETVNQLIGEYQSDYPDSLYYTKQTIG 87
Query: 58 NACATQAILSILLNCPDI---DIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFA 114
NAC T AI+ L N ++ D E TK PE + + + + AAH A
Sbjct: 88 NACGTVAIVHALANNENVIPFDAAKHFKTFLEKTKPLNPEERAKHLEQDNLMGAAHGDCA 147
Query: 115 RPEPFVPEEQKAAGKDDDV-YHFISYIPVDGVLYELDGLKEGPISLGPCTG 164
+ + +A +D+ V HF++ + +G LYELDG KE P+ G +
Sbjct: 148 QEG-----DTQAPSQDEHVKSHFVALVHCNGTLYELDGRKEAPVVHGTTSA 193
>sp|Q10171|UBLH1_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=uch1 PE=3 SV=1
Length = 222
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 82/179 (45%), Gaps = 37/179 (20%)
Query: 3 MQVEELYSLDLDSLNNL-----RPVYGLIFLFKWRPGE---KDDRVVIKDPNPNLFFASQ 54
+ V++ DL SL + RPV+ L+F+F + K R++ KD + L++ Q
Sbjct: 19 IGVQDASVFDLFSLEEIPEYIPRPVHALLFVFPSSGTKTIYKGSRILPKDSDKVLWYP-Q 77
Query: 55 VINNACATQAILSILLNCPDIDIGPELSKLKE--FTKNFPPELKGLAIN-------NSDA 105
I NAC T +L + N G K+ E F K+ +G +I +S
Sbjct: 78 TIPNACGTIGLLHAVSN------GELRRKVNENDFIKSLIRTAEGSSIEERAKLIEDSKE 131
Query: 106 IRAAHNSFARPEPFVPEEQKAAGKDDDV---YHFISYIPV----DGVLYELDGLKEGPI 157
+ A H +FA P P + G ++DV HFI ++ D YELDG +EGP+
Sbjct: 132 LEALHAAFAGP-PL-----EVEGSEEDVETDLHFICFVKGKSKDDNHFYELDGRQEGPV 184
>sp|P35127|UBL1_YEAST Ubiquitin carboxyl-terminal hydrolase YUH1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YUH1 PE=1
SV=1
Length = 236
Score = 37.0 bits (84), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 16/174 (9%)
Query: 20 RPVYGLIFLFKWRPGEKDDRVVIKDPNPNLFFASQVINNACATQAILSILLNCPDI-DIG 78
RPV ++ LF K + ++ + Q + NAC AIL L N + + G
Sbjct: 50 RPVKAIVLLFPINEDRKSSTSQQITSSYDVIWFKQSVKNACGLYAILHSLSNNQSLLEPG 109
Query: 79 PELSKLKEFTKNFPPELKGLAINNSD-----AIRAAHNSFARPEPFVPEEQKAAGKDDDV 133
+L + + +D I+ +F+ + PE D
Sbjct: 110 SDLDNFLKSQSDTSSSKNRFDDVTTDQFVLNVIKENVQTFSTGQSEAPEATA-----DTN 164
Query: 134 YHFISYIPVDGVLYELDGLK-EGPISLGPCTGGQGDMDWLQMVQPVIQERIERY 186
H+I+Y+ +G ++ELDG GP+ LG D+ + Q +++ R+ Y
Sbjct: 165 LHYITYVEENGGIFELDGRNLSGPLYLGKSDPTATDL----IEQELVRVRVASY 214
>sp|A5WFW1|SYA_PSYWF Alanine--tRNA ligase OS=Psychrobacter sp. (strain PRwf-1) GN=alaS
PE=3 SV=1
Length = 903
Score = 33.1 bits (74), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%)
Query: 199 IKNRKELYTAELKEFQRKRERILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEK 258
+ +R + + +E +++ ER+ Q++AS Q+ +VD A K L AGI+G +
Sbjct: 755 VADRVQTMADKQRELEKQIERLNQKIASAQAATLVDNVQTIADKKVLIAQVAGIDGKAMR 814
Query: 259 ILMEEEKFK 267
L+++ K K
Sbjct: 815 GLIDDIKSK 823
>sp|B3CV54|RPOC_ORITI DNA-directed RNA polymerase subunit beta' OS=Orientia tsutsugamushi
(strain Ikeda) GN=rpoC PE=3 SV=1
Length = 1396
Score = 32.7 bits (73), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 190 EIRFNLMAVIKNRKELYTAELKEFQRKRERILQQL--ASLQSERMVDKTSFEALNKSLSE 247
E + N AVI K+L L+E Q + ILQ + ASLQ+E + SF+ + L+E
Sbjct: 1279 EEKVNKRAVINTNKKLKAKGLREAQYRP--ILQGITKASLQTESFISAASFQETTRVLTE 1336
Query: 248 VNAGIEGATEKI 259
A I G +K+
Sbjct: 1337 --AAIAGKVDKL 1346
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.136 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 114,751,142
Number of Sequences: 539616
Number of extensions: 4909380
Number of successful extensions: 16123
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 15867
Number of HSP's gapped (non-prelim): 205
length of query: 312
length of database: 191,569,459
effective HSP length: 117
effective length of query: 195
effective length of database: 128,434,387
effective search space: 25044705465
effective search space used: 25044705465
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)