Query 021437
Match_columns 312
No_of_seqs 119 out of 1442
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 02:57:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021437.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021437hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03144 Carbon catabolite rep 100.0 1.8E-33 3.8E-38 265.1 26.9 192 2-193 252-479 (606)
2 PRK11756 exonuclease III; Prov 100.0 1.1E-29 2.3E-34 223.2 17.2 229 5-295 1-268 (268)
3 TIGR03395 sphingomy sphingomye 100.0 4.2E-28 9.1E-33 213.2 21.7 246 5-292 1-282 (283)
4 smart00476 DNaseIc deoxyribonu 100.0 2.9E-28 6.2E-33 211.3 19.9 174 2-190 15-200 (276)
5 COG3568 ElsH Metal-dependent h 100.0 1.1E-27 2.3E-32 202.6 19.4 238 5-296 10-258 (259)
6 PRK05421 hypothetical protein; 99.9 7.2E-25 1.6E-29 191.5 22.0 217 2-296 41-262 (263)
7 COG0708 XthA Exonuclease III [ 99.9 6.3E-26 1.4E-30 192.3 12.8 234 5-295 1-261 (261)
8 TIGR00195 exoDNase_III exodeox 99.9 8E-25 1.7E-29 190.8 16.3 222 5-293 1-254 (254)
9 PTZ00297 pantothenate kinase; 99.9 1.7E-23 3.7E-28 215.7 26.3 273 3-308 9-327 (1452)
10 KOG2338 Transcriptional effect 99.9 1E-22 2.3E-27 183.3 20.0 182 4-194 116-317 (495)
11 PRK13911 exodeoxyribonuclease 99.9 3.9E-22 8.4E-27 172.2 19.4 229 5-293 1-249 (250)
12 TIGR00633 xth exodeoxyribonucl 99.9 2.5E-22 5.5E-27 175.1 18.5 221 5-293 1-254 (255)
13 KOG3873 Sphingomyelinase famil 99.9 8.1E-21 1.8E-25 164.0 15.5 267 2-299 6-296 (422)
14 KOG2756 Predicted Mg2+-depende 99.9 1.3E-20 2.7E-25 156.7 14.5 237 5-294 100-348 (349)
15 PF03372 Exo_endo_phos: Endonu 99.8 1.7E-17 3.7E-22 142.4 18.7 157 8-184 1-171 (249)
16 COG2374 Predicted extracellula 99.8 1.9E-17 4.1E-22 155.6 15.7 187 2-193 461-698 (798)
17 PRK15251 cytolethal distending 99.7 8.1E-17 1.8E-21 137.7 17.4 157 3-189 23-204 (271)
18 COG5239 CCR4 mRNA deadenylase, 99.7 3.5E-17 7.6E-22 142.1 11.6 183 4-192 30-265 (378)
19 COG3021 Uncharacterized protei 99.7 7.3E-17 1.6E-21 139.2 12.0 215 4-296 88-308 (309)
20 KOG0620 Glucose-repressible al 99.6 1.1E-15 2.4E-20 137.3 8.3 185 4-193 19-245 (361)
21 smart00128 IPPc Inositol polyp 99.4 9.6E-12 2.1E-16 111.0 18.5 158 3-183 3-195 (310)
22 KOG0566 Inositol-1,4,5-triphos 99.1 3.6E-09 7.9E-14 102.3 15.6 158 5-181 539-726 (1080)
23 PF14529 Exo_endo_phos_2: Endo 98.7 5.9E-08 1.3E-12 74.1 6.2 42 137-181 1-42 (119)
24 COG5411 Phosphatidylinositol 5 98.4 2.1E-06 4.6E-11 77.4 9.9 57 120-181 155-218 (460)
25 PLN03191 Type I inositol-1,4,5 98.4 7.4E-06 1.6E-10 77.4 13.4 41 252-297 553-593 (621)
26 KOG1294 Apurinic/apyrimidinic 98.1 3.2E-05 6.9E-10 69.1 10.3 149 136-294 168-334 (335)
27 PTZ00312 inositol-1,4,5-tripho 94.6 0.15 3.3E-06 44.4 7.2 51 134-184 79-143 (356)
28 KOG1976 Inositol polyphosphate 93.3 0.22 4.8E-06 43.5 5.9 59 123-186 162-234 (391)
29 PLN03191 Type I inositol-1,4,5 75.4 2.8 6E-05 40.7 3.2 49 134-182 419-482 (621)
30 KOG0565 Inositol polyphosphate 53.5 40 0.00086 26.3 5.5 51 134-184 58-123 (145)
31 KOG0808 Carbon-nitrogen hydrol 42.4 25 0.00055 30.3 2.8 24 27-50 101-124 (387)
32 COG5239 CCR4 mRNA deadenylase, 35.1 20 0.00042 32.6 1.2 50 136-185 139-191 (378)
33 COG1407 Predicted ICC-like pho 27.8 1.4E+02 0.003 25.7 5.0 47 134-181 20-76 (235)
34 cd07400 MPP_YydB Bacillus subt 27.8 1.5E+02 0.0032 22.6 5.0 50 138-188 3-55 (144)
35 PRK12404 stage V sporulation p 25.5 3.3E+02 0.0071 24.7 7.1 46 147-192 200-248 (334)
36 cd07401 MPP_TMEM62_N Homo sapi 24.9 1E+02 0.0023 26.5 4.0 43 138-181 4-46 (256)
37 PRK08304 stage V sporulation p 23.1 3.5E+02 0.0075 24.6 6.9 46 147-192 202-250 (337)
38 PLN02798 nitrilase 21.7 1.5E+02 0.0032 26.0 4.4 42 1-48 7-51 (286)
39 PRK10438 C-N hydrolase family 21.0 1.7E+02 0.0036 25.2 4.5 22 28-49 22-44 (256)
40 PF07451 SpoVAD: Stage V sporu 21.0 1.8E+02 0.0038 26.1 4.5 45 148-192 198-245 (329)
No 1
>PLN03144 Carbon catabolite repressor protein 4 homolog; Provisional
Probab=100.00 E-value=1.8e-33 Score=265.07 Aligned_cols=192 Identities=16% Similarity=0.220 Sum_probs=144.2
Q ss_pred CccEEEEEeecCCCC---------CCCCCCcHHHHHHHHHHHHhhcCCcEEEEcCCCcccHHH-HHhcCCCCceEeeecC
Q 021437 2 SVALSLMTFNLHEDQ---------QEDSPNSWVKRRDLCISVITSYSPMILCTQQGVKSQLDY-LQQCLPAYDQFGVSRK 71 (312)
Q Consensus 2 ~~~l~v~T~Nv~~~~---------~~~~~~~w~~r~~~i~~~i~~~~pDIi~LQEv~~~~~~~-l~~~l~~y~~~~~~~~ 71 (312)
+.++|||||||.... -++....|+.|+..|++.|..++|||||||||...++++ +...|..|.|.+....
T Consensus 252 ~~~frVmSYNILAd~ya~~dly~ycp~~aL~W~yRk~lIl~EI~~~~aDIICLQEV~~~~~~d~~~p~L~~~GY~Gv~~~ 331 (606)
T PLN03144 252 AGTFTVLSYNILSDLYATSDMYSYCPPWALSWTYRRQNLLREIVGYRADILCLQEVQSDHFEEFFAPELDKHGYQALYKK 331 (606)
T ss_pred CCCEEEEEeeeccccccCcccccCCCccccCHHHHHHHHHHHHHhcCCCEEEEeecCHHHHHHHHHhhhhhcCceEEEeC
Confidence 457999999998653 123467899999999999999999999999999888865 4556755555444332
Q ss_pred CCC------CCCCceEEEEEeCCCcEEEeeeeEe-----ccCCCCCCCCcccCccCCc-----eEEEEEeeeccC-----
Q 021437 72 GPE------DTSDEHCTIFYDKEKVELLEGGTFW-----LSESPSVPGSKAWGAEVPC-----IATWATFQLKGV----- 130 (312)
Q Consensus 72 ~~~------~~~~~~~ai~~~~~~~~~~~~~~~~-----l~~~p~~~~~~~~~~~~~r-----~~~~~~~~~~~~----- 130 (312)
..+ ....+++||||++++|++++...+. ++..+...++.+++..++| +++++.|+.+.+
T Consensus 332 Kt~~~~~~~~~~~DGcAIFyr~drFeLv~~~~ief~~~~lslt~~~~~s~~~~~~l~Rl~kdNVAliv~Le~k~~~~~~~ 411 (606)
T PLN03144 332 KTTEVYTGNTYVIDGCATFFRRDRFSLVKKYEVEFNKAAQSLTEALIPSAQKKAALNRLLKDNVALIVVLEAKFGNQGAD 411 (606)
T ss_pred CCCccccccccCCceeEEEEECcceEEEEeeeeeccchhhccCccccccccchhhhhhhccCcEEEEEEEEEeccccccc
Confidence 111 1246789999999999999886653 3333444344455666777 788999988621
Q ss_pred -CCCCcEEEEEeccCCC--ccHHHHHHHHHHHHHHHHhcC--CCCCEEEEecCCCCCCchhHHhhhcc
Q 021437 131 -EPPGFSFQIVNTNMDE--FTARARRRSALLTWQHIASLP--PSLPVIYCGGFNTQKESTTGRFLLGR 193 (312)
Q Consensus 131 -~~~g~~~~v~~~Hl~~--~~~~~r~~~~~~l~~~l~~~~--~~~pvIv~GDfN~~~~~~~~~~l~~~ 193 (312)
...++.|.|+||||.+ ...+.|..|+..|++.|+++. .+.|+|||||||+.|++..|+.|..+
T Consensus 412 ~~~~~~~l~VaNTHL~~~p~~~dvRl~Q~~~Ll~~l~~~~~~~~~PvIlcGDFNS~P~S~vy~lLt~G 479 (606)
T PLN03144 412 NGGKRQLLCVANTHIHANQELKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHCLLATG 479 (606)
T ss_pred CCCCccEEEEEEeeeccCCccchhHHHHHHHHHHHHHHHhhcCCCceEEeccCCCCCCChhhhhhhcC
Confidence 0114579999999954 456789999999999998764 36799999999999999999998764
No 2
>PRK11756 exonuclease III; Provisional
Probab=99.97 E-value=1.1e-29 Score=223.19 Aligned_cols=229 Identities=17% Similarity=0.167 Sum_probs=146.7
Q ss_pred EEEEEeecCCCCCCCCCCcHHHHHHHHHHHHhhcCCcEEEEcCCCcccH---HHHHhcCCCCceEeeecCCCCCCCCceE
Q 021437 5 LSLMTFNLHEDQQEDSPNSWVKRRDLCISVITSYSPMILCTQQGVKSQL---DYLQQCLPAYDQFGVSRKGPEDTSDEHC 81 (312)
Q Consensus 5 l~v~T~Nv~~~~~~~~~~~w~~r~~~i~~~i~~~~pDIi~LQEv~~~~~---~~l~~~l~~y~~~~~~~~~~~~~~~~~~ 81 (312)
|||+||||+.. ..|...+.++|++.+||||||||+....- ..+... .+|.++..+. ....++
T Consensus 1 mri~T~Nv~g~---------~~~~~~i~~~i~~~~pDIi~LQE~~~~~~~~~~~~~~~-~gy~~~~~~~-----~~~~Gv 65 (268)
T PRK11756 1 MKFVSFNINGL---------RARPHQLEAIIEKHQPDVIGLQETKVHDEMFPLEEVEA-LGYHVFYHGQ-----KGHYGV 65 (268)
T ss_pred CEEEEEEcCCH---------HHHHHHHHHHHHhcCCCEEEEEecccccccCCHHHHHh-cCCEEEEeCC-----CCCCEE
Confidence 68999999742 34667899999999999999999863311 112222 4676554332 234578
Q ss_pred EEEEeCCCcEEEeeeeEeccCCCCCCCCcccCccCCceEEEEEeeeccCCCCCcEEEEEeccCCCcc-------HHHHHH
Q 021437 82 TIFYDKEKVELLEGGTFWLSESPSVPGSKAWGAEVPCIATWATFQLKGVEPPGFSFQIVNTNMDEFT-------ARARRR 154 (312)
Q Consensus 82 ai~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~r~~~~~~~~~~~~~~~g~~~~v~~~Hl~~~~-------~~~r~~ 154 (312)
||+++... ..... .+ +.. .....|.++++.+... +..+.++|+|+++.. ...|.+
T Consensus 66 ailSr~p~---~~~~~-~~---~~~------~~~~~~r~l~~~i~~~-----~g~~~v~n~y~P~~~~~~~~~~~~~r~~ 127 (268)
T PRK11756 66 ALLSKQTP---IAVRK-GF---PTD------DEEAQRRIIMATIPTP-----NGNLTVINGYFPQGESRDHPTKFPAKRQ 127 (268)
T ss_pred EEEECCCh---HHeEE-CC---CCc------cccccCCEEEEEEEcC-----CCCEEEEEEEecCCCCCCcchhHHHHHH
Confidence 99877542 22111 11 110 0112355566777654 335999999997632 124566
Q ss_pred HHHHHHHHHHhc-CCCCCEEEEecCCCCCCchhH--------------------------HhhhcccccCCccccccchh
Q 021437 155 SALLTWQHIASL-PPSLPVIYCGGFNTQKESTTG--------------------------RFLLGRSREHGVVGDMRDAW 207 (312)
Q Consensus 155 ~~~~l~~~l~~~-~~~~pvIv~GDfN~~~~~~~~--------------------------~~l~~~~~~~g~~~~l~d~~ 207 (312)
+++.|.+++.+. ..+.|+|||||||+.+.+... +.+.. . .|.|+|
T Consensus 128 ~~~~l~~~l~~~~~~~~pvIl~GDfN~~~~~~D~~~~~~~~~~~~~~~~~~~~~~er~~~~~l~~----~----~l~D~~ 199 (268)
T PRK11756 128 FYQDLQNYLETELSPDNPLLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWLDRLMD----W----GLVDTF 199 (268)
T ss_pred HHHHHHHHHHHHhccCCCEEEEeecccCCChhhcCCcccChHHhcccCCccCCHHHHHHHHHHHh----C----CcEeeh
Confidence 778788888764 456799999999998765422 12221 1 388998
Q ss_pred hhhhhcCCCCCcccccCCCCCCcchhHHHHHHHhhhhccccCCCCCCceeEEEecCCcee--eeeEEeecCCCCCcCCCC
Q 021437 208 PNARMRKNVSLIRTYHGFKGNKQGALEFLKLIFRALCLCWDRQTQDLHIDWILFRGRSLI--PGSCEVVNDNIDGYYPSS 285 (312)
Q Consensus 208 ~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~riD~I~~s~~~~~--~~~~~v~~~~~~~~~~SD 285 (312)
+..... ....+||..+..... . .+.+.||||||+++ .+. +.++.+......+.++||
T Consensus 200 R~~~p~--~~~~~T~~~~~~~~~-----------------~-~~~g~RIDyi~~s~-~~~~~v~~~~i~~~~~~~~~~SD 258 (268)
T PRK11756 200 RQLNPD--VNDRFSWFDYRSKGF-----------------D-DNRGLRIDLILATQ-PLAERCVETGIDYDIRGMEKPSD 258 (268)
T ss_pred hhhCCC--CCCcccCcCCccccc-----------------c-cCCceEEEEEEeCH-HHHhhheEeEEeHHHhCCCCCCC
Confidence 876532 133567755543221 0 01579999999998 454 778888766556678999
Q ss_pred CcceEEEEEe
Q 021437 286 HYPIFAEFML 295 (312)
Q Consensus 286 H~pV~a~~~~ 295 (312)
|+||+++|++
T Consensus 259 H~PV~~~~~~ 268 (268)
T PRK11756 259 HAPIWATFKL 268 (268)
T ss_pred cccEEEEEeC
Confidence 9999999874
No 3
>TIGR03395 sphingomy sphingomyelin phosphodiesterase. Members of this family are bacterial proteins that act as sphingomyelin phosphodiesterase (EC 3.1.4.12), also called sphingomyelinase. Some members of this family have been shown to act as hemolysins.
Probab=99.96 E-value=4.2e-28 Score=213.18 Aligned_cols=246 Identities=14% Similarity=0.124 Sum_probs=149.5
Q ss_pred EEEEEeecCCCC-CCCCCCcHHHHHHHHHHHHhhcCCcEEEEcCCCcccHH-HHHhcC-CCCceEe--eecCCCC-----
Q 021437 5 LSLMTFNLHEDQ-QEDSPNSWVKRRDLCISVITSYSPMILCTQQGVKSQLD-YLQQCL-PAYDQFG--VSRKGPE----- 74 (312)
Q Consensus 5 l~v~T~Nv~~~~-~~~~~~~w~~r~~~i~~~i~~~~pDIi~LQEv~~~~~~-~l~~~l-~~y~~~~--~~~~~~~----- 74 (312)
||||||||+... ...+...|+.|.+.|.+.+...+|||||||||...+.. .|.+.| ..|.|.. .++...+
T Consensus 1 lkVmtyNv~~l~~~~~~~~g~~~R~~~i~~~~~~~~~DVV~LQEv~~~~~~~~l~~~L~~~yp~~~~~~g~~~~g~~~~~ 80 (283)
T TIGR03395 1 IKILSHNVYMLSTNLYPNWGQMERADLIASADYIKNQDVVILNEAFDTSASKRLLDNLREEYPYQTDVIGRSKKGWDKTL 80 (283)
T ss_pred CeEEEEEeeeecccccCCccHhHHHHHHHHhhcccCCCEEEEecccchHHHHHHHHHHHhhCCceEeecccccccchhcc
Confidence 689999999643 22345678999999999999999999999999977643 355555 4455532 2221000
Q ss_pred ------CCCCceEEEEEeCCCcEEEeeeeEeccCCCCCCCCcccCccCCceEEEEEeeeccCCCCCcEEEEEeccCCCc-
Q 021437 75 ------DTSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSKAWGAEVPCIATWATFQLKGVEPPGFSFQIVNTNMDEF- 147 (312)
Q Consensus 75 ------~~~~~~~ai~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~r~~~~~~~~~~~~~~~g~~~~v~~~Hl~~~- 147 (312)
.....+++|+. +++++......+... .+.+....|-+.++++... |+.+.|++|||.+.
T Consensus 81 g~~~~~~~~~~G~~iLS---r~Pi~~~~~~~f~~~------~~~d~~~~kg~l~a~i~~~-----g~~~~v~~THL~~~~ 146 (283)
T TIGR03395 81 GNYSSSALEDGGVAIVS---KWPIEEKIQYIFNKG------CGADNLSNKGFAYVKINKN-----GKKFHVIGTHLQAQD 146 (283)
T ss_pred ccccccCccCCEEEEEE---CCCccccEEEEccCC------CCCccccCCceEEEEEecC-----CeEEEEEEeCCCCCc
Confidence 01123455552 345544433323210 1111123466666776543 78999999999873
Q ss_pred -------cHHHHHHHHHHHHHHHHhc--CCCCCEEEEecCCCCCCchhHHhhhcccccCCccccccchhhhhhhcCCCCC
Q 021437 148 -------TARARRRSALLTWQHIASL--PPSLPVIYCGGFNTQKESTTGRFLLGRSREHGVVGDMRDAWPNARMRKNVSL 218 (312)
Q Consensus 148 -------~~~~r~~~~~~l~~~l~~~--~~~~pvIv~GDfN~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~ 218 (312)
....|.+|++.|.+++++. ..+.|+|||||||+.+.+..|+.+..... ..+.. . .+.
T Consensus 147 ~~~~~~~~~~~R~~Q~~~i~~~i~~~~~~~~~pvIl~GDfN~~~~s~~~~~ml~~l~-------~~~p~-----~--~g~ 212 (283)
T TIGR03395 147 SMCSKLGPASIRANQLNEIQDFIDSKNIPKDETVLIGGDLNVNKGSNEYHDMFKTLN-------VSEPR-----Y--VGV 212 (283)
T ss_pred ccccccccHHHHHHHHHHHHHHHhhccCCCCceEEEEeeCCCCCCCHHHHHHHHHhc-------ccCCC-----c--CCC
Confidence 2678999999999999753 34678999999999999999987765321 11110 0 122
Q ss_pred cccccCCCCCCcchhHHHHHHHhhhhccccCCCCCCceeEEEecCCceeeeeEEeecCC----------CCCcCCCCCcc
Q 021437 219 IRTYHGFKGNKQGALEFLKLIFRALCLCWDRQTQDLHIDWILFRGRSLIPGSCEVVNDN----------IDGYYPSSHYP 288 (312)
Q Consensus 219 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~riD~I~~s~~~~~~~~~~v~~~~----------~~~~~~SDH~p 288 (312)
..||..-..+.. +. ... .....||||||+++...++.+++.+... ......|||+|
T Consensus 213 ~~T~d~~~N~~a-----------~~--~~~-~~~~~~lDyvl~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~sdh~~ 278 (283)
T TIGR03395 213 PATWDATTNSIA-----------KY--YYP-KEEPEYLDYIFVSKSHAQPPVWQNKVLDPKSVTSWFKKYTYDDFSDHYP 278 (283)
T ss_pred CCCcCCCcCchh-----------hh--hcC-CCCcceEEEEEEECCCCCCccccceEEeccccccccccccccccccccc
Confidence 345532211110 00 000 1246799999999865665543322111 12345899999
Q ss_pred eEEE
Q 021437 289 IFAE 292 (312)
Q Consensus 289 V~a~ 292 (312)
|.+.
T Consensus 279 v~~~ 282 (283)
T TIGR03395 279 VYGF 282 (283)
T ss_pred eeee
Confidence 9874
No 4
>smart00476 DNaseIc deoxyribonuclease I. Deoxyribonuclease I catalyzes the endonucleolytic cleavage of double-stranded DNA. The enzyme is secreted outside the cell and also involved in apoptosis in the nucleus.
Probab=99.96 E-value=2.9e-28 Score=211.26 Aligned_cols=174 Identities=16% Similarity=0.145 Sum_probs=130.9
Q ss_pred CccEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHhhcCCcEEEEcCCCcccHHHHHhcC--------CCCceEeeecCCC
Q 021437 2 SVALSLMTFNLHEDQQEDSPNSWVKRRDLCISVITSYSPMILCTQQGVKSQLDYLQQCL--------PAYDQFGVSRKGP 73 (312)
Q Consensus 2 ~~~l~v~T~Nv~~~~~~~~~~~w~~r~~~i~~~i~~~~pDIi~LQEv~~~~~~~l~~~l--------~~y~~~~~~~~~~ 73 (312)
+..|+|+||||+... ++..+|+.|++.|+++|+ +||||++|||...+..++...| ..|.|++.++.+
T Consensus 15 ~~~l~I~SfNIr~fg--d~k~~~~~r~~~i~~il~--~~DIiglQEV~d~q~~~l~~ll~~Ln~~~~~~Y~~v~s~r~g- 89 (276)
T smart00476 15 AASLRICAFNIQSFG--DSKMSNATLMSIIVKILS--RYDIALVQEVRDSDLSAVPKLMDQLNSDSPNTYSYVSSEPLG- 89 (276)
T ss_pred CCcEEEEEEECcccC--CccccHHHHHHHHHHHhc--cCCEEEEEEeecchhHHHHHHHHHHhhcCCCCceEEecCCCC-
Confidence 567999999999543 556789999999999999 7899999999987765544333 289999988763
Q ss_pred CCCCCceEEEEEeCCCcEEEeeeeEeccCCCCCCCCcccCccCCceEEEEEeeeccCCCCCcEEEEEeccCCCccHHHHH
Q 021437 74 EDTSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSKAWGAEVPCIATWATFQLKGVEPPGFSFQIVNTNMDEFTARARR 153 (312)
Q Consensus 74 ~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~r~~~~~~~~~~~~~~~g~~~~v~~~Hl~~~~~~~r~ 153 (312)
+...+++.+++|+++++++++...+ ++.|. +++..+.|.+.++.|+...+. ++.|.++++|+++.....+.
T Consensus 90 r~~~~E~~a~~Yr~drv~v~~~~~f--~d~~~-----~~~~~F~ReP~~~~F~~~~~~--~~~F~li~~H~~p~~~~~e~ 160 (276)
T smart00476 90 RNSYKEQYLFLYRSDLVSVLDSYLY--DDGCE-----CGNDVFSREPFVVKFSSPSTA--VKEFVIVPLHTTPEAAVAEI 160 (276)
T ss_pred CCCCCEEEEEEEecceEEEccccee--cCCCC-----CccccccccceEEEEEeCCCC--CccEEEEEecCChHHHHHHH
Confidence 3456799999999999999987665 33222 456778999999999988641 57899999999986555544
Q ss_pred HH-HHHHHHHHHhcCCCCCEEEEecCCCCCC---chhHHhh
Q 021437 154 RS-ALLTWQHIASLPPSLPVIYCGGFNTQKE---STTGRFL 190 (312)
Q Consensus 154 ~~-~~~l~~~l~~~~~~~pvIv~GDfN~~~~---~~~~~~l 190 (312)
++ ++.+.+..++. +..++|+|||||+.+. +..++.+
T Consensus 161 ~aL~~v~~~~~~~~-~~~~villGDFNa~~~y~~~~~~~~i 200 (276)
T smart00476 161 DALYDVYLDVRQKW-GTEDVIFMGDFNAGCSYVTKKQWSSI 200 (276)
T ss_pred HHHHHHHHHHHHhh-ccCCEEEEccCCCCCCccChhhhhhh
Confidence 44 23344444443 4689999999999764 3445544
No 5
>COG3568 ElsH Metal-dependent hydrolase [General function prediction only]
Probab=99.96 E-value=1.1e-27 Score=202.57 Aligned_cols=238 Identities=20% Similarity=0.224 Sum_probs=149.9
Q ss_pred EEEEEeecCCCCCCCCCCcHHHHHHHHHHHHhhcCCcEEEEcCCCcc----------cHHHHHhcC-CCCceEeeecCCC
Q 021437 5 LSLMTFNLHEDQQEDSPNSWVKRRDLCISVITSYSPMILCTQQGVKS----------QLDYLQQCL-PAYDQFGVSRKGP 73 (312)
Q Consensus 5 l~v~T~Nv~~~~~~~~~~~w~~r~~~i~~~i~~~~pDIi~LQEv~~~----------~~~~l~~~l-~~y~~~~~~~~~~ 73 (312)
++|+||||+.+.... .+....+.+.+.+.+..+|||||||+... +...+...+ ..|.+........
T Consensus 10 ~~v~TyNih~~~~~~---d~r~~~~r~~~~i~~~~~Div~LQEv~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 86 (259)
T COG3568 10 FKVLTYNIHKGFGAF---DRRFDLPRIAEVIREVGADIVALQEVDGAFGRHRDGLLDLPHLLGRLGLAPYWWSGAAFGAV 86 (259)
T ss_pred eEEEEEEEEEccCcc---CceecHHHHHHHHHhhccCeeeeecccccccccccccchhHHHHHHhcCCccccchhhhhhh
Confidence 689999999876541 22234678999999999999999999852 112222222 2222222111000
Q ss_pred CCCCCceEEEEEeCCCcEEEeeeeEeccCCCCCCCCcccCccCCceEEEEEeeeccCCCCCcEEEEEeccCCCccHHHHH
Q 021437 74 EDTSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSKAWGAEVPCIATWATFQLKGVEPPGFSFQIVNTNMDEFTARARR 153 (312)
Q Consensus 74 ~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~r~~~~~~~~~~~~~~~g~~~~v~~~Hl~~~~~~~r~ 153 (312)
......+++++. ++++.......++. . ....+|.++++++... . |+++.|+|+||. .+...|.
T Consensus 87 ~~~~~~GnaiLS---~~pi~~v~~~~lp~---~------~~~~~Rgal~a~~~~~-~---g~~l~V~~~HL~-l~~~~R~ 149 (259)
T COG3568 87 YGEGQHGNAILS---RLPIRDVENLALPD---P------TGLEPRGALLAEIELP-G---GKPLRVINAHLG-LSEESRL 149 (259)
T ss_pred cccceeeeEEEe---cCcccchhhccCCC---C------CCCCCceeEEEEEEcC-C---CCEEEEEEEecc-ccHHHHH
Confidence 112235677775 33333322222211 0 1235799999999876 3 789999999999 7888999
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEecCCCCCCchhHHhhhcccccCCccccccchhhhhhhcCCCCCcccccCCCCCCcchh
Q 021437 154 RSALLTWQHIASLPPSLPVIYCGGFNTQKESTTGRFLLGRSREHGVVGDMRDAWPNARMRKNVSLIRTYHGFKGNKQGAL 233 (312)
Q Consensus 154 ~~~~~l~~~l~~~~~~~pvIv~GDfN~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~t~~~~~~~~~~~~ 233 (312)
+|++.|++.+. +....|+|+|||||+.|++..|+.........+ ..+.+.+..+... ...||+++.
T Consensus 150 ~Q~~~L~~~~~-l~~~~p~vl~GDFN~~p~s~~yr~~~~~~~~~~--~~~~~~~~~a~~~----~~~tfps~~------- 215 (259)
T COG3568 150 RQAAALLALAG-LPALNPTVLMGDFNNEPGSAEYRLAARSPLNAQ--AALTGAFAPAVGR----TIRTFPSNT------- 215 (259)
T ss_pred HHHHHHHhhcc-CcccCceEEEccCCCCCCCccceeccCCchhhc--cccccccCcccCc----ccCCCCCCC-------
Confidence 99999888322 222349999999999999999966554210000 0111221111000 012554433
Q ss_pred HHHHHHHhhhhccccCCCCCCceeEEEecCCceeeeeEEeecCCCCCcCCCCCcceEEEEEec
Q 021437 234 EFLKLIFRALCLCWDRQTQDLHIDWILFRGRSLIPGSCEVVNDNIDGYYPSSHYPIFAEFMLP 296 (312)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~riD~I~~s~~~~~~~~~~v~~~~~~~~~~SDH~pV~a~~~~~ 296 (312)
+..+|||||+++ .+.+.+++++.... ....|||+||.|++.++
T Consensus 216 ------------------p~lriD~Ifvs~-~~~i~~~~v~~~~~-a~~aSDHlPl~aeL~~~ 258 (259)
T COG3568 216 ------------------PLLRLDRIFVSK-ELAIRSVHVLTDRL-ARVASDHLPLLAELRLK 258 (259)
T ss_pred ------------------ccccccEEEecC-cccEEEEEeecCCC-ccccccccceEEEEecC
Confidence 457999999999 68888999887743 56689999999999875
No 6
>PRK05421 hypothetical protein; Provisional
Probab=99.94 E-value=7.2e-25 Score=191.51 Aligned_cols=217 Identities=17% Similarity=0.230 Sum_probs=131.1
Q ss_pred CccEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHhhcCCcEEEEcCCCccc-HHHHHhcCCCCceEeeecCCCCCCCCce
Q 021437 2 SVALSLMTFNLHEDQQEDSPNSWVKRRDLCISVITSYSPMILCTQQGVKSQ-LDYLQQCLPAYDQFGVSRKGPEDTSDEH 80 (312)
Q Consensus 2 ~~~l~v~T~Nv~~~~~~~~~~~w~~r~~~i~~~i~~~~pDIi~LQEv~~~~-~~~l~~~l~~y~~~~~~~~~~~~~~~~~ 80 (312)
+.+|||+||||+..... .| . ...+.+ ..+|||||||||.... ...+...+ ++.+...... .......+
T Consensus 41 ~~~lri~t~NI~~~~~~----~~---~-~~l~~l-~~~~DiI~LQEv~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~G 109 (263)
T PRK05421 41 EERLRLLVWNIYKQQRA----GW---L-SVLKNL-GKDADLVLLQEAQTTPELVQFATAN-YLAADQAPAF-VLPQHPSG 109 (263)
T ss_pred CCceeEEEEEccccccc----cH---H-HHHHHh-ccCCCEEEEEecccCcchHHHhhcc-cchHHhcccc-ccCCCccc
Confidence 46799999999976532 11 2 233334 8899999999997542 23333322 2322111000 01112456
Q ss_pred EEEEEeCCCcEEEeeeeEeccCCCCCCCCcccCccCCceEEEEEeeeccCCCCCcEEEEEeccCCCc--cHHHHHHHHHH
Q 021437 81 CTIFYDKEKVELLEGGTFWLSESPSVPGSKAWGAEVPCIATWATFQLKGVEPPGFSFQIVNTNMDEF--TARARRRSALL 158 (312)
Q Consensus 81 ~ai~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~r~~~~~~~~~~~~~~~g~~~~v~~~Hl~~~--~~~~r~~~~~~ 158 (312)
++++.+ +++.....+ ..+. + ....+|.++++.+.... |+.+.|+|+|+.+. +...|.+|++.
T Consensus 110 vaiLSR---~pi~~~~~~---~~~~-~-----~~~~~r~~l~a~~~~~~----g~~l~v~ntHl~~~~~~~~~r~~q~~~ 173 (263)
T PRK05421 110 VMTLSK---AHPVYCCPL---RERE-P-----WLRLPKSALITEYPLPN----GRTLLVVNIHAINFSLGVDVYSKQLEP 173 (263)
T ss_pred eeEeee---cccceeecc---CCCC-c-----cccCcceeEEEEEEeCC----CCEEEEEEECccccCcChHHHHHHHHH
Confidence 888855 555443221 1111 1 12346888888887652 67899999999753 45678889999
Q ss_pred HHHHHHhcCCCCCEEEEecCCCCCCc--hhHHhhhcccccCCccccccchhhhhhhcCCCCCcccccCCCCCCcchhHHH
Q 021437 159 TWQHIASLPPSLPVIYCGGFNTQKES--TTGRFLLGRSREHGVVGDMRDAWPNARMRKNVSLIRTYHGFKGNKQGALEFL 236 (312)
Q Consensus 159 l~~~l~~~~~~~pvIv~GDfN~~~~~--~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~ 236 (312)
+.+.+.+. ..|+|||||||+.+.. ..++.+... .| +.+. +|.......
T Consensus 174 l~~~~~~~--~~p~Il~GDFN~~~~~~~~~l~~~~~~---~~----l~~~--------------~~~~~~~~~------- 223 (263)
T PRK05421 174 IGDQIAHH--SGPVILAGDFNTWSRKRMNALKRFARE---LG----LKEV--------------RFTDDQRRR------- 223 (263)
T ss_pred HHHHHHhC--CCCEEEEcccccCcccchHHHHHHHHH---cC----CCcc--------------CcCCccccc-------
Confidence 99988765 3699999999986543 233333321 01 2221 221111000
Q ss_pred HHHHhhhhccccCCCCCCceeEEEecCCceeeeeEEeecCCCCCcCCCCCcceEEEEEec
Q 021437 237 KLIFRALCLCWDRQTQDLHIDWILFRGRSLIPGSCEVVNDNIDGYYPSSHYPIFAEFMLP 296 (312)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~riD~I~~s~~~~~~~~~~v~~~~~~~~~~SDH~pV~a~~~~~ 296 (312)
....+|||||+++ +.+.+++++. ...|||+||+++|++.
T Consensus 224 --------------~~~~~ID~I~~~~--~~v~~~~v~~-----~~~SDH~Pv~a~l~l~ 262 (263)
T PRK05421 224 --------------AFGRPLDFVFYRG--LNVSKASVLV-----TRASDHNPLLVEFSLK 262 (263)
T ss_pred --------------ccCCCcceEEECC--cEEEEEEcCC-----CCCCCccCEEEEEEec
Confidence 0247899999964 8888888873 3589999999999975
No 7
>COG0708 XthA Exonuclease III [DNA replication, recombination, and repair]
Probab=99.93 E-value=6.3e-26 Score=192.33 Aligned_cols=234 Identities=18% Similarity=0.260 Sum_probs=140.9
Q ss_pred EEEEEeecCCCCCCCCCCcHHHHHHHHHHHHhhcCCcEEEEcCCCcccHHHHHhc--CCCCc-eEeeecCCCCCCCCceE
Q 021437 5 LSLMTFNLHEDQQEDSPNSWVKRRDLCISVITSYSPMILCTQQGVKSQLDYLQQC--LPAYD-QFGVSRKGPEDTSDEHC 81 (312)
Q Consensus 5 l~v~T~Nv~~~~~~~~~~~w~~r~~~i~~~i~~~~pDIi~LQEv~~~~~~~l~~~--l~~y~-~~~~~~~~~~~~~~~~~ 81 (312)
|||+||||...+ .|...+.+.|.+.+||||||||+.-..-+.-.+. ..+|. ++..+. ....++
T Consensus 1 mkI~SwNVNgiR---------ar~~~~~~~l~~~~pDVlclQEtK~~~~~fp~~~~~~~GY~~~~~~gq-----KgysGV 66 (261)
T COG0708 1 MKIASWNVNGLR---------ARLKKLLDWLEEEQPDVLCLQETKAQDEQFPREELEALGYHHVFNHGQ-----KGYSGV 66 (261)
T ss_pred CeeEEEehhhHH---------HHHHHHHHHHHHhCCCEEEEEecccCcccCCHhHHhhCCceEEEecCc-----CCcceE
Confidence 689999997542 5677899999999999999999875432111111 25884 444433 345679
Q ss_pred EEEEeCCCcEEEeeeeEeccCCCCCCCCcccCccCCceEEEEEeeeccCCCCCcEEEEEeccCCCccH------HHHHHH
Q 021437 82 TIFYDKEKVELLEGGTFWLSESPSVPGSKAWGAEVPCIATWATFQLKGVEPPGFSFQIVNTNMDEFTA------RARRRS 155 (312)
Q Consensus 82 ai~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~r~~~~~~~~~~~~~~~g~~~~v~~~Hl~~~~~------~~r~~~ 155 (312)
|++++..... +..+ + +.. .......|++. +.|. + |.|+|.++++.+. ..+.+-
T Consensus 67 ailsr~~~~~-v~~g---~---~~~----~~~d~e~R~I~-a~~~-------~--~~v~~~Y~PnG~~~~~~k~~yKl~f 125 (261)
T COG0708 67 AILSKKPPDD-VRRG---F---PGE----EEDDEEGRVIE-AEFD-------G--FRVINLYFPNGSSIGLEKFDYKLRF 125 (261)
T ss_pred EEEEccCchh-hhcC---C---CCC----ccccccCcEEE-EEEC-------C--EEEEEEEcCCCCCCCCcchHHHHHH
Confidence 9998754321 1111 0 110 00122346654 5553 3 9999999998543 344555
Q ss_pred HHHHHHHHHhcC-CCCCEEEEecCCCCCCchhHHhhh---cccccCCcc------------ccccchhhhhhhcCCCCCc
Q 021437 156 ALLTWQHIASLP-PSLPVIYCGGFNTQKESTTGRFLL---GRSREHGVV------------GDMRDAWPNARMRKNVSLI 219 (312)
Q Consensus 156 ~~~l~~~l~~~~-~~~pvIv~GDfN~~~~~~~~~~l~---~~~~~~g~~------------~~l~d~~~~~~~~~~~~~~ 219 (312)
...+.+++.++. .+.|+|+|||||..+.......-. .+....|+. ..+.|+++...... ..
T Consensus 126 ~~~l~~~l~~l~~~~~~~vl~GD~NIap~~iDv~~~~~~~~n~~~~~f~~eeR~~~~~ll~~G~~D~~R~~~p~~---~~ 202 (261)
T COG0708 126 LDALRNYLEELLKKGKPVVLCGDFNIAPEEIDVANPKKRWLNEGNSGFLPEERAWFRRLLNAGFVDTFRLFHPEP---EK 202 (261)
T ss_pred HHHHHHHHHHHhhcCCCEEEecccccCCchhcccCchhhhhcCCCCCCCHHHHHHHHHHHHcchhhhhHhhCCCC---Cc
Confidence 555666666543 358999999999987653222111 000011111 02677777654332 12
Q ss_pred ccccCCCCCCcchhHHHHHHHhhhhccccCCCCCCceeEEEecCCce--eeeeEEeecCCCCCcCCCCCcceEEEEEe
Q 021437 220 RTYHGFKGNKQGALEFLKLIFRALCLCWDRQTQDLHIDWILFRGRSL--IPGSCEVVNDNIDGYYPSSHYPIFAEFML 295 (312)
Q Consensus 220 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~riD~I~~s~~~~--~~~~~~v~~~~~~~~~~SDH~pV~a~~~~ 295 (312)
+||-.+... .|+.+ .+.||||+++|+ .+ ++.++.|.........+|||+||+++|.+
T Consensus 203 YTwW~YR~~----------~~~~n--------~G~RID~~l~S~-~L~~~~~~a~I~~~~rg~e~pSDHaPV~~e~~~ 261 (261)
T COG0708 203 YTWWDYRAN----------AARRN--------RGWRIDYILVSP-ALADRLKDAGIDREVRGWEKPSDHAPVWVELDL 261 (261)
T ss_pred ccccccccc----------hhhhc--------CceeEEEEEeCH-HHHHHHHhcCccHHHhcCCCCCCcCcEEEEecC
Confidence 555444332 22332 589999999998 45 46677777664444568999999999864
No 8
>TIGR00195 exoDNase_III exodeoxyribonuclease III. The model brings in reverse transcriptases at scores below 50, model also contains eukaryotic apurinic/apyrimidinic endonucleases which group in the same family
Probab=99.93 E-value=8e-25 Score=190.76 Aligned_cols=222 Identities=18% Similarity=0.240 Sum_probs=137.9
Q ss_pred EEEEEeecCCCCCCCCCCcHHHHHHHHHHHHhhcCCcEEEEcCCCccc---HHHHHhcCCCCceEeeecCCCCCCCCceE
Q 021437 5 LSLMTFNLHEDQQEDSPNSWVKRRDLCISVITSYSPMILCTQQGVKSQ---LDYLQQCLPAYDQFGVSRKGPEDTSDEHC 81 (312)
Q Consensus 5 l~v~T~Nv~~~~~~~~~~~w~~r~~~i~~~i~~~~pDIi~LQEv~~~~---~~~l~~~l~~y~~~~~~~~~~~~~~~~~~ 81 (312)
|||+||||+... .+...+.+.|..++||||||||+.... ...+... .+|.++..+. ....++
T Consensus 1 mri~t~Ni~g~~---------~~~~~~~~~l~~~~~DIi~LQE~~~~~~~~~~~~~~~-~g~~~~~~~~-----~g~~Gv 65 (254)
T TIGR00195 1 MKIISWNVNGLR---------ARLHKGLAWLKENQPDVLCLQETKVQDEQFPLEPFHK-EGYHVFFSGQ-----KGYSGV 65 (254)
T ss_pred CEEEEEEcCcHH---------HhHHHHHHHHHhcCCCEEEEEecccchhhCCHHHhhc-CCcEEEEecC-----CCcceE
Confidence 699999997532 234557999999999999999997543 1222222 4665554332 123458
Q ss_pred EEEEeCCCcEEEeeeeEeccCCCCCCCCcccCccCCceEEEEEeeeccCCCCCcEEEEEeccCCCcc------HHHHHHH
Q 021437 82 TIFYDKEKVELLEGGTFWLSESPSVPGSKAWGAEVPCIATWATFQLKGVEPPGFSFQIVNTNMDEFT------ARARRRS 155 (312)
Q Consensus 82 ai~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~r~~~~~~~~~~~~~~~g~~~~v~~~Hl~~~~------~~~r~~~ 155 (312)
+|+++...+.+... +.. ... ....|++. +.++ .+.++|+|+++.+ ...|.+.
T Consensus 66 ailsr~~~~~~~~~----~~~-~~~-------~~~~r~i~-~~~~---------~~~l~~~~~p~~~~~~~~~~~~r~~~ 123 (254)
T TIGR00195 66 AIFSKEEPLSVRRG----FGV-EEE-------DAEGRIIM-AEFD---------SFLVINGYFPNGSRDDSEKLPYKLQW 123 (254)
T ss_pred EEEEcCCcceEEEC----CCC-ccc-------ccCCCEEE-EEEC---------CEEEEEEEccCCCCCCCccHHHHHHH
Confidence 88887554443210 111 000 01235432 4431 4899999998832 2346677
Q ss_pred HHHHHHHHHhcC-CCCCEEEEecCCCCCCch--------------------hHHhhhcccccCCccccccchhhhhhhcC
Q 021437 156 ALLTWQHIASLP-PSLPVIYCGGFNTQKEST--------------------TGRFLLGRSREHGVVGDMRDAWPNARMRK 214 (312)
Q Consensus 156 ~~~l~~~l~~~~-~~~pvIv~GDfN~~~~~~--------------------~~~~l~~~~~~~g~~~~l~d~~~~~~~~~ 214 (312)
.+.+.+.+.++. .+.|+|+|||||..+.+. .++.+.. . .|.|+|+.....
T Consensus 124 ~~~l~~~~~~~~~~~~pvIi~GDfN~~~~~~d~~~~~~~~~~~~~~~~e~~~~~~l~~----~----~l~D~~r~~~~~- 194 (254)
T TIGR00195 124 LEALQNYLEKLVDKDKPVLICGDMNIAPTEIDLHSPDENRNHTGFLPEEREWLDRLLE----A----GLVDTFRKFNPD- 194 (254)
T ss_pred HHHHHHHHHHHHhcCCcEEEEeecccCCChhhccChhhcCCCcCcChHHHHHHHHHHH----c----CCEeeecccCCC-
Confidence 777888887653 357999999999987652 3444442 1 388888765433
Q ss_pred CCCCcccccCCCCCCcchhHHHHHHHhhhhccccCCCCCCceeEEEecCCcee--eeeEEeecCCCCCcCCCCCcceEEE
Q 021437 215 NVSLIRTYHGFKGNKQGALEFLKLIFRALCLCWDRQTQDLHIDWILFRGRSLI--PGSCEVVNDNIDGYYPSSHYPIFAE 292 (312)
Q Consensus 215 ~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~riD~I~~s~~~~~--~~~~~v~~~~~~~~~~SDH~pV~a~ 292 (312)
+..+||..+...... ...+.||||||+++ .+. +.++.+.........+|||+||.++
T Consensus 195 --~~~~T~~~~~~~~~~------------------~~~g~RID~i~~s~-~~~~~v~~~~i~~~~~~~~~~SDH~Pv~~~ 253 (254)
T TIGR00195 195 --EGAYSWWDYRTKARD------------------RNRGWRIDYFLVSE-PLKERCVDCGIDYDIRGSEKPSDHCPVVLE 253 (254)
T ss_pred --CCCCcccCCcCCccc------------------cCCceEEEEEEECH-HHHhhhhEEEEcHHHhcCCCCCCcccEEEe
Confidence 334666554332110 01468999999998 454 7788876543334578999999987
Q ss_pred E
Q 021437 293 F 293 (312)
Q Consensus 293 ~ 293 (312)
|
T Consensus 254 ~ 254 (254)
T TIGR00195 254 F 254 (254)
T ss_pred C
Confidence 5
No 9
>PTZ00297 pantothenate kinase; Provisional
Probab=99.92 E-value=1.7e-23 Score=215.66 Aligned_cols=273 Identities=14% Similarity=0.133 Sum_probs=162.7
Q ss_pred ccEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHhhc-CCcEEEEcCCCccc------------HHHHHhcC--CCCceEe
Q 021437 3 VALSLMTFNLHEDQQEDSPNSWVKRRDLCISVITSY-SPMILCTQQGVKSQ------------LDYLQQCL--PAYDQFG 67 (312)
Q Consensus 3 ~~l~v~T~Nv~~~~~~~~~~~w~~r~~~i~~~i~~~-~pDIi~LQEv~~~~------------~~~l~~~l--~~y~~~~ 67 (312)
.+|||+||||++..+. ...|. .+.|..+|++. +||||||||+.... .+.+.+.+ .+|.|+.
T Consensus 9 ~~l~VlTyNv~~~~~~--~~~~~--~~ri~~~i~~l~~~DIv~lQEvf~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 84 (1452)
T PTZ00297 9 AQARVLSYNFNILPRG--CGGFQ--HERIETFLASVDAYDVVLLQEVYAASVLPYFLQKQLCFQKMLVDELKARGFHHYV 84 (1452)
T ss_pred CceEEEEEEccccCCC--ccccc--HHHHHHHHHhccCCCEEEEecccccccccccccccchhhHHHHHHHHhcCCceeE
Confidence 5799999999866422 22232 46677788884 78999999998642 01122222 3787776
Q ss_pred eecCCCC-------CCCCceEEEEEeCCCcEEEeeeeEeccCCCCCCCCcccCccCCceEEEEEeeeccCCCCCcEEEEE
Q 021437 68 VSRKGPE-------DTSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSKAWGAEVPCIATWATFQLKGVEPPGFSFQIV 140 (312)
Q Consensus 68 ~~~~~~~-------~~~~~~~ai~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~r~~~~~~~~~~~~~~~g~~~~v~ 140 (312)
.++.... .....++||+ ||+++.+...+.++..... +...+|.++++++........+..++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~G~AIL---SR~PI~~~~~~~l~~~~~~------~~~~~RG~L~a~I~vp~~~g~~~~v~v~ 155 (1452)
T PTZ00297 85 ISKQPSYLTMLRYNVCSDNGLIIA---SRFPIWQRGSYTFRNHERG------EQSVRRGCLFAEVEVPLAEGGSQRIVFF 155 (1452)
T ss_pred eecCccccccccCccccCCEEEEE---ECCChhhceeeecCccccc------ccccccceEEEEEEccccCCCCceEEEE
Confidence 5553210 0134568888 5688888877766542211 1124688888888764210002589999
Q ss_pred eccCCCc-cHHHHHHHHHHHHHHHHh-c---------CCCCCEEEEecCCCC----C----CchhHHhhhcccccCCccc
Q 021437 141 NTNMDEF-TARARRRSALLTWQHIAS-L---------PPSLPVIYCGGFNTQ----K----ESTTGRFLLGRSREHGVVG 201 (312)
Q Consensus 141 ~~Hl~~~-~~~~r~~~~~~l~~~l~~-~---------~~~~pvIv~GDfN~~----~----~~~~~~~l~~~~~~~g~~~ 201 (312)
+|||... +...|.+|++.+.+++.. + ..+.|+||+||||+. + .+..|..+.......+ .
T Consensus 156 ~tHL~~~~~~~~R~~Q~~ql~~~i~~~i~~~~~~~~~~~~~PvILaGDFN~~~~~~~~~~~~s~e~~~ml~~l~~~~--~ 233 (1452)
T PTZ00297 156 NVHLRQEDSLPSTSSQVQETRRFVESVIANVYEQNNDGAEIPFVIAGDFNINGIDPHNGGHPTKRFQELLNELQDLG--S 233 (1452)
T ss_pred EeCCCCCCCcchHHHHHHHHHHHHHHhhhhhcccccCCCCCCEEEEeeCCCccccccccCCccHHHHHHHHHhhhcc--c
Confidence 9999974 334577888888877764 1 235699999999965 2 3356655544321111 0
Q ss_pred cccchhhhhhhcCCCCCcccccCCC-CCCcchhHHHHHHHhhhhccccCCCCCCceeEEEecCCceeeeeEEeecC----
Q 021437 202 DMRDAWPNARMRKNVSLIRTYHGFK-GNKQGALEFLKLIFRALCLCWDRQTQDLHIDWILFRGRSLIPGSCEVVND---- 276 (312)
Q Consensus 202 ~l~d~~~~~~~~~~~~~~~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~riD~I~~s~~~~~~~~~~v~~~---- 276 (312)
.+.|.+..... ....||+... .+... .+.- ......||||||+++ .+.+.+++++..
T Consensus 234 ~l~dv~~~~~~----~~~~T~p~~~~fP~~~------------p~~~-~~~~~~riD~Ifv~~-~v~v~~~~v~~~~~~~ 295 (1452)
T PTZ00297 234 GVREVIYDETG----QHPPTRPPILFFPEQS------------KLER-YSSTPQRQDYFFVTP-CVQVEKPRIEKFVVSS 295 (1452)
T ss_pred cHhHHhHhhcC----CCCCCCCccccccccC------------cccc-ccCCCcceeEEEEeC-CceEEEEEEecccccC
Confidence 14454443321 1123432211 01000 0000 001346999999998 688888888654
Q ss_pred CCCCcCCCCCcceEEEEEecCccccccCCCCc
Q 021437 277 NIDGYYPSSHYPIFAEFMLPRTVRVIEQPNST 308 (312)
Q Consensus 277 ~~~~~~~SDH~pV~a~~~~~~~~~~~~~~~~~ 308 (312)
.....++|||+||.|+|+++.+.+...+...+
T Consensus 296 ~~~~~~~SDH~Pv~a~l~l~~~~~~~~~~~~~ 327 (1452)
T PTZ00297 296 RRPYTYLSDHFGVSARLTLPLNPSVIFEGRSL 327 (1452)
T ss_pred CCCCCCcCcCccEEEEEEeCCChhhccccccc
Confidence 23456799999999999997766555444433
No 10
>KOG2338 consensus Transcriptional effector CCR4-related protein [Transcription]
Probab=99.91 E-value=1e-22 Score=183.31 Aligned_cols=182 Identities=19% Similarity=0.360 Sum_probs=129.6
Q ss_pred cEEEEEeecCCCC----------CC-CCCCcHHHHHHHHHHHHhhcCCcEEEEcCCCcccHHHHH-hcC--CCCceEeee
Q 021437 4 ALSLMTFNLHEDQ----------QE-DSPNSWVKRRDLCISVITSYSPMILCTQQGVKSQLDYLQ-QCL--PAYDQFGVS 69 (312)
Q Consensus 4 ~l~v~T~Nv~~~~----------~~-~~~~~w~~r~~~i~~~i~~~~pDIi~LQEv~~~~~~~l~-~~l--~~y~~~~~~ 69 (312)
+++||||||.... +. .-...|..|...|+..|...+|||+|||||...+...+. ..+ -||..+..-
T Consensus 116 ~ftvmSYNILAQ~l~~~~~r~~~~~s~~~L~W~~R~~~Ll~EL~~~dpDIlCLQEVq~d~~~~~~~~~~~~lGy~~~~~r 195 (495)
T KOG2338|consen 116 DFTVMSYNILAQDLLRDIRRLYFPESGPALKWLRRSQNLLNELKHYDPDVLCLQEVQEDHYPEFWQPLLGKLGYTGFFKR 195 (495)
T ss_pred ceEEEEehHhHHHHHHHhHHhhccCChhhcchhHHhHHHHHHHhhcCCCeeeehhhhhhhhHHHHHHHHhhcCceEEEEe
Confidence 6999999997642 11 124579999999999999999999999999987654322 222 366654443
Q ss_pred cCCCCCCCCceEEEEEeCCCcEEEeeeeEeccCCCCCCCCcccCccCCceEEEEEeeeccCCCCCcEEEEEeccC--CCc
Q 021437 70 RKGPEDTSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSKAWGAEVPCIATWATFQLKGVEPPGFSFQIVNTNM--DEF 147 (312)
Q Consensus 70 ~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~r~~~~~~~~~~~~~~~g~~~~v~~~Hl--~~~ 147 (312)
.. ..++.+++++|++++|+++....+.+-. .++. -....-|..++.|+.+.+...++.+.|.|||| .+.
T Consensus 196 ~t---~~KthG~ai~w~~~~F~lv~~~~l~y~~----~~~~--l~n~~NV~lvv~l~f~~~~~~sq~ilVanTHLl~np~ 266 (495)
T KOG2338|consen 196 RT---GTKTHGVAILWHSAKFKLVNHSELNYFD----SGSA--LANRDNVGLVVSLEFRLVDESSQGILVANTHLLFNPS 266 (495)
T ss_pred cc---CCCCceEEEEEecccceecccchhhccc----ccch--hhcccceeEEEEEEecccCcccCceEEEeeeeeecCc
Confidence 33 1357789999999999998765543321 1100 01112355556565543322256899999999 446
Q ss_pred cHHHHHHHHHHHHHHHHhcCC----CCCEEEEecCCCCCCchhHHhhhccc
Q 021437 148 TARARRRSALLTWQHIASLPP----SLPVIYCGGFNTQKESTTGRFLLGRS 194 (312)
Q Consensus 148 ~~~~r~~~~~~l~~~l~~~~~----~~pvIv~GDfN~~~~~~~~~~l~~~~ 194 (312)
.+..|.+|...|++.+.+... +-|+|+|||||..|++.+|..+.++.
T Consensus 267 ~~~vrL~Q~~iiL~~~~~~~~~~~~~~pi~l~GDfNt~p~~~~y~fl~~~~ 317 (495)
T KOG2338|consen 267 RSDVRLAQVYIILAELEKMSKSSKSHWPIFLCGDFNTEPDSPPYLFLTSGP 317 (495)
T ss_pred ccchhhHHHHHHHHHHHHHHhhcccCCCeEEecCCCCCCCCCcchhhhcCC
Confidence 788999999999999987643 45999999999999999999888763
No 11
>PRK13911 exodeoxyribonuclease III; Provisional
Probab=99.90 E-value=3.9e-22 Score=172.21 Aligned_cols=229 Identities=16% Similarity=0.175 Sum_probs=129.7
Q ss_pred EEEEEeecCCCCCCCCCCcHHHHH-HHHHHHHhhcCCcEEEEcCCCcccHHHHHhcCCCCceEeeecCCCCCCCCceEEE
Q 021437 5 LSLMTFNLHEDQQEDSPNSWVKRR-DLCISVITSYSPMILCTQQGVKSQLDYLQQCLPAYDQFGVSRKGPEDTSDEHCTI 83 (312)
Q Consensus 5 l~v~T~Nv~~~~~~~~~~~w~~r~-~~i~~~i~~~~pDIi~LQEv~~~~~~~l~~~l~~y~~~~~~~~~~~~~~~~~~ai 83 (312)
|||+||||.... .|. ..+.+.|.+.+||||||||+.....+. .-.+++|..+.... +.....++|+
T Consensus 1 mki~swNVNgir---------~~~~~~~~~~l~~~~~DIiclQEtK~~~~~~-~~~~~gY~~~~~~~---~~kgy~GVAi 67 (250)
T PRK13911 1 MKLISWNVNGLR---------ACMTKGFMDFFNSVDADVFCIQESKMQQEQN-TFEFKGYFDFWNCA---IKKGYSGVVT 67 (250)
T ss_pred CEEEEEEeCChh---------HhhhhhHHHHHHhcCCCEEEEEeeccccccc-ccccCCceEEEEec---ccCccceEEE
Confidence 689999998653 233 258899999999999999998653322 12246786543211 1234567999
Q ss_pred EEeCCCcEEEeeeeEeccCCCCCCCCcccCccCCceEEEEEeeeccCCCCCcEEEEEeccCCCccHH-----HHHHHHHH
Q 021437 84 FYDKEKVELLEGGTFWLSESPSVPGSKAWGAEVPCIATWATFQLKGVEPPGFSFQIVNTNMDEFTAR-----ARRRSALL 158 (312)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~r~~~~~~~~~~~~~~~g~~~~v~~~Hl~~~~~~-----~r~~~~~~ 158 (312)
+++.....+.. .+.. +.. ....|.+. +.| + .|.|+|++.++.+.. .|.+-...
T Consensus 68 ~~k~~~~~v~~----~~~~-~~~-------d~eGR~I~-~~~--------~-~~~l~nvY~Pn~~~~~~r~~~K~~~~~~ 125 (250)
T PRK13911 68 FTKKEPLSVSY----GINI-EEH-------DKEGRVIT-CEF--------E-SFYLVNVYTPNSQQALSRLSYRMSWEVE 125 (250)
T ss_pred EEcCCchheEE----cCCC-Ccc-------cccCCEEE-EEE--------C-CEEEEEEEecCCCCCCcchHHHHHHHHH
Confidence 98865433321 1111 000 11236543 444 2 599999999985322 23333345
Q ss_pred HHHHHHhcCCCCCEEEEecCCCCCCchhHHhhhcccccCCcc------------ccccchhhhhhhcCCCCCcccccCCC
Q 021437 159 TWQHIASLPPSLPVIYCGGFNTQKESTTGRFLLGRSREHGVV------------GDMRDAWPNARMRKNVSLIRTYHGFK 226 (312)
Q Consensus 159 l~~~l~~~~~~~pvIv~GDfN~~~~~~~~~~l~~~~~~~g~~------------~~l~d~~~~~~~~~~~~~~~t~~~~~ 226 (312)
+.+++.++..+.++|+|||||..+.......-.......|+. ..+.|+++...... +..+||-.+.
T Consensus 126 ~~~~l~~l~~~~~~Ii~GD~Nva~~~~D~~~~~~~~~~~gf~~~er~~f~~~l~~gl~D~~R~~~p~~--~~~yTww~~~ 203 (250)
T PRK13911 126 FKKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGKFSELLNAGFIDTFRYFYPNK--EKAYTWWSYM 203 (250)
T ss_pred HHHHHHhcccCCCEEEEccccCCCChhhccChhhcCCCCCcCHHHHHHHHHHHhcCCeehhhhhCCCC--CCCCccCCCc
Confidence 556666655567999999999877542211000000001110 03778877654321 1235553333
Q ss_pred CCCcchhHHHHHHHhhhhccccCCCCCCceeEEEecCCce--eeeeEEeecCCCCCcCCCCCcceEEEE
Q 021437 227 GNKQGALEFLKLIFRALCLCWDRQTQDLHIDWILFRGRSL--IPGSCEVVNDNIDGYYPSSHYPIFAEF 293 (312)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~riD~I~~s~~~~--~~~~~~v~~~~~~~~~~SDH~pV~a~~ 293 (312)
..... ...+.||||||+++. + ++.++.+.. ....|||+||+++|
T Consensus 204 ~~~~~------------------~n~g~RIDyilvs~~-~~~~~~~~~i~~----~~~~SDH~Pv~~~~ 249 (250)
T PRK13911 204 QQARD------------------KNIGWRIDYFLCSNP-LKTRLKDALIYK----DILGSDHCPVGLEL 249 (250)
T ss_pred CCccc------------------cCCcceEEEEEEChH-HhhhEEEEEECC----CCCCCCcccEEEEe
Confidence 22110 125799999999983 4 344555433 24579999999876
No 12
>TIGR00633 xth exodeoxyribonuclease III (xth). This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=99.90 E-value=2.5e-22 Score=175.06 Aligned_cols=221 Identities=18% Similarity=0.211 Sum_probs=127.0
Q ss_pred EEEEEeecCCCCCCCCCCcHHHHHHHH-HHHHhhcCCcEEEEcCCCcccHH---HHHhcCCCCceEeeecCCCCCCCCce
Q 021437 5 LSLMTFNLHEDQQEDSPNSWVKRRDLC-ISVITSYSPMILCTQQGVKSQLD---YLQQCLPAYDQFGVSRKGPEDTSDEH 80 (312)
Q Consensus 5 l~v~T~Nv~~~~~~~~~~~w~~r~~~i-~~~i~~~~pDIi~LQEv~~~~~~---~l~~~l~~y~~~~~~~~~~~~~~~~~ 80 (312)
|||+||||+... .+...+ .+.|.+.+||||||||+...... .+. ...+|.++..+... ....+
T Consensus 1 lri~t~Nv~g~~---------~~~~~~~~~~l~~~~~DIv~LQE~~~~~~~~~~~~~-~~~g~~~~~~~~~~---~~~~G 67 (255)
T TIGR00633 1 MKIISWNVNGLR---------ARLHKLFLDWLKEEQPDVLCLQETKVADEQFPAELF-EELGYHVFFHGAKS---KGYSG 67 (255)
T ss_pred CEEEEEecccHH---------HHhhccHHHHHHhcCCCEEEEEeccCchhhCCHhHh-ccCCceEEEeeccc---CCcce
Confidence 699999998643 234455 89999999999999999865311 121 22467665443321 12346
Q ss_pred EEEEEeCCCcEEEeeeeEeccCCCCCCCCcccCccCCceEEEEEeeeccCCCCCcEEEEEeccCCCcc--H----HHHHH
Q 021437 81 CTIFYDKEKVELLEGGTFWLSESPSVPGSKAWGAEVPCIATWATFQLKGVEPPGFSFQIVNTNMDEFT--A----RARRR 154 (312)
Q Consensus 81 ~ai~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~r~~~~~~~~~~~~~~~g~~~~v~~~Hl~~~~--~----~~r~~ 154 (312)
++|+++.....+.. + + +... .....|.+ .+.+ +.+.|+++|+++.+ . ..|..
T Consensus 68 ~ailsr~~~~~~~~-~---~---~~~~-----~~~~~r~l-~~~~---------~~~~i~~vy~p~~~~~~~~~~~~r~~ 125 (255)
T TIGR00633 68 VAILSKVEPLDVRY-G---F---GGEE-----HDEEGRVI-TAEF---------DGFTVVNVYVPNGGSRGLERLEYKLQ 125 (255)
T ss_pred EEEEEcCCcceEEE-C---C---CCCc-----ccCCCcEE-EEEE---------CCEEEEEEEccCCCCCCchhHHHHHH
Confidence 88887744222211 0 1 1100 01112422 2222 26899999998754 1 34555
Q ss_pred HHHHHHHHHHh-cCCCCCEEEEecCCCCCCch--------------------hHHhhhcccccCCccccccchhhhhhhc
Q 021437 155 SALLTWQHIAS-LPPSLPVIYCGGFNTQKEST--------------------TGRFLLGRSREHGVVGDMRDAWPNARMR 213 (312)
Q Consensus 155 ~~~~l~~~l~~-~~~~~pvIv~GDfN~~~~~~--------------------~~~~l~~~~~~~g~~~~l~d~~~~~~~~ 213 (312)
+...+.+.+.+ ...+.|+|+|||||+.+... .++.+.. . .|.|+|+.....
T Consensus 126 ~~~~l~~~~~~~~~~~~~~Il~GDFN~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~----~----~l~D~~~~~~~~ 197 (255)
T TIGR00633 126 FWDALFQYYEKELDAGKPVIICGDMNVAHTEIDLGNPKENKGNAGFTPEEREWFDELLE----A----GLVDTFRHFNPD 197 (255)
T ss_pred HHHHHHHHHHHHHhcCCcEEEEeecccCCChHHccChhhcCCCCCcCHHHHHHHHHHHH----c----CCEecchhhCCC
Confidence 55555555543 23457999999999976431 2333332 2 378887654322
Q ss_pred CCCCCcccccCCCCCCcchhHHHHHHHhhhhccccCCCCCCceeEEEecCCcee--eeeEEeecCCCCCcCCCCCcceEE
Q 021437 214 KNVSLIRTYHGFKGNKQGALEFLKLIFRALCLCWDRQTQDLHIDWILFRGRSLI--PGSCEVVNDNIDGYYPSSHYPIFA 291 (312)
Q Consensus 214 ~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~riD~I~~s~~~~~--~~~~~v~~~~~~~~~~SDH~pV~a 291 (312)
. +..+||..+...... ...+.||||||++. .+. +.++.+.... ..|||+||++
T Consensus 198 ~--~~~~T~~~~~~~~~~------------------~~~~~rID~i~~s~-~~~~~~~~~~i~~~~----~~SDH~pv~~ 252 (255)
T TIGR00633 198 T--EGAYTWWDYRSGARD------------------RNRGWRIDYFLVSE-PLAERVVDSYIDSEI----RGSDHCPIVL 252 (255)
T ss_pred C--CCcCcCcCCccCccc------------------cCCceEEEEEEECH-HHHhhhcEeEECCCC----CCCCcccEEE
Confidence 1 224576554322110 01457999999988 343 5566665332 2499999999
Q ss_pred EE
Q 021437 292 EF 293 (312)
Q Consensus 292 ~~ 293 (312)
+|
T Consensus 253 ~~ 254 (255)
T TIGR00633 253 EL 254 (255)
T ss_pred EE
Confidence 87
No 13
>KOG3873 consensus Sphingomyelinase family protein [Signal transduction mechanisms]
Probab=99.86 E-value=8.1e-21 Score=164.00 Aligned_cols=267 Identities=18% Similarity=0.153 Sum_probs=160.2
Q ss_pred CccEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHhhcCCcEEEEcCCCccc-HHHHHhcC-CCCce---EeeecCCCCCC
Q 021437 2 SVALSLMTFNLHEDQQEDSPNSWVKRRDLCISVITSYSPMILCTQQGVKSQ-LDYLQQCL-PAYDQ---FGVSRKGPEDT 76 (312)
Q Consensus 2 ~~~l~v~T~Nv~~~~~~~~~~~w~~r~~~i~~~i~~~~pDIi~LQEv~~~~-~~~l~~~l-~~y~~---~~~~~~~~~~~ 76 (312)
+-.|||+|.|+|+.. -....-..|...+.+.+..+..||+.|||++..+ .+.|.+.. +-|.| +..+-
T Consensus 6 a~~lriltlN~Wgip--~~Sk~R~~Rm~~~g~~l~~E~yDiv~LQEvWs~eD~~~L~~~~ss~yPysh~FHSGi------ 77 (422)
T KOG3873|consen 6 ALELRILTLNIWGIP--YVSKDRRHRMDAIGDELASEKYDIVSLQEVWSQEDFEYLQSGCSSVYPYSHYFHSGI------ 77 (422)
T ss_pred hheeeeeEeeccccc--cccchhHHHHHHHhHHHhhcccchhhHHHHHHHHHHHHHHHhccccCchHHhhhccc------
Confidence 357999999999753 2223334678899999999999999999998653 67777755 23333 33321
Q ss_pred CCceEEEEEeCCCcEEEeeeeEe--ccCCCCCCCCcccCccCCceEEEEEeeeccCCCCCcEEEEEeccCCCcc------
Q 021437 77 SDEHCTIFYDKEKVELLEGGTFW--LSESPSVPGSKAWGAEVPCIATWATFQLKGVEPPGFSFQIVNTNMDEFT------ 148 (312)
Q Consensus 77 ~~~~~ai~~~~~~~~~~~~~~~~--l~~~p~~~~~~~~~~~~~r~~~~~~~~~~~~~~~g~~~~v~~~Hl~~~~------ 148 (312)
.|.+.++|. ++++++..... +.-.|..+....|-. -+.+-.+.++.. |+.+.++|+||.+.-
T Consensus 78 mGaGL~vfS---K~PI~~t~~~~y~lNG~p~~i~rGDWf~--GK~Vgl~~l~~~-----g~~v~~yntHLHAeY~rq~D~ 147 (422)
T KOG3873|consen 78 MGAGLCVFS---KHPILETLFHRYSLNGYPHAIHRGDWFG--GKGVGLTVLLVG-----GRMVNLYNTHLHAEYDRQNDE 147 (422)
T ss_pred ccCceEEee---cCchhhhhhhccccCCccceeeeccccc--cceeEEEEEeeC-----CEEeeeeehhccccccccCch
Confidence 366788884 46666543222 222222221111210 122222344333 889999999998731
Q ss_pred -HHHHHHHHHHHHHHHHhcC-CCCCEEEEecCCCCCCchhHHhhhcccccCCccccccchhhhhhhcCCCCCcccccCCC
Q 021437 149 -ARARRRSALLTWQHIASLP-PSLPVIYCGGFNTQKESTTGRFLLGRSREHGVVGDMRDAWPNARMRKNVSLIRTYHGFK 226 (312)
Q Consensus 149 -~~~r~~~~~~l~~~l~~~~-~~~pvIv~GDfN~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~t~~~~~ 226 (312)
...|..|+=.+.++|+... ++.-||++||||+.|.+-+++.++.. .+.|+|+............-....+
T Consensus 148 YL~HR~~QAwdlaqfi~~t~q~~~vVI~~GDLN~~P~dl~~~ll~~a--------~l~daw~~~h~~q~e~~~~r~s~~~ 219 (422)
T KOG3873|consen 148 YLCHRVAQAWDLAQFIRATRQNADVVILAGDLNMQPQDLGHKLLLSA--------GLVDAWTSLHLDQCESDSFRLSEDK 219 (422)
T ss_pred hhhHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCccccceeeeecc--------chhhhHhhhchhhhcCcccccchhh
Confidence 2368888888889988654 35689999999999999999999853 2789998765332111111100000
Q ss_pred CCCcch-hHHHHHHHhhhhcccc----CCCCCCceeEEEecCCceeee--eEEeecCC-C-CCcCCCCCcceEEEEEecC
Q 021437 227 GNKQGA-LEFLKLIFRALCLCWD----RQTQDLHIDWILFRGRSLIPG--SCEVVNDN-I-DGYYPSSHYPIFAEFMLPR 297 (312)
Q Consensus 227 ~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~riD~I~~s~~~~~~~--~~~v~~~~-~-~~~~~SDH~pV~a~~~~~~ 297 (312)
+-.+++ .|-+. +|+... ....+.||||||+++..+.++ +++..... + ..-..|||.+++|+|.+..
T Consensus 220 ~l~~g~tcd~~~-----N~y~~aqk~~ddp~~~RiDYvl~k~~~~~~~~a~~~~t~~rvP~~d~s~SDH~Al~a~L~I~~ 294 (422)
T KOG3873|consen 220 ELVEGNTCDSPL-----NCYTSAQKREDDPLGKRIDYVLVKPGDCNAKIAEVEFTEPRVPGEDCSYSDHEALMATLKIFK 294 (422)
T ss_pred hhhcCCcccCcc-----hhhhHHHhCCCCccceeeeEEEEcCcceEEEeeeEEecCCCCCCCCCCccchhhheeEEEeec
Confidence 000110 01110 111100 012378999999998644443 45544422 2 3345799999999999875
Q ss_pred cc
Q 021437 298 TV 299 (312)
Q Consensus 298 ~~ 299 (312)
+.
T Consensus 295 ~~ 296 (422)
T KOG3873|consen 295 QP 296 (422)
T ss_pred CC
Confidence 44
No 14
>KOG2756 consensus Predicted Mg2+-dependent phosphodiesterase TTRAP [Signal transduction mechanisms]
Probab=99.85 E-value=1.3e-20 Score=156.71 Aligned_cols=237 Identities=19% Similarity=0.270 Sum_probs=152.8
Q ss_pred EEEEEeecCCCCCCCCCCcHHHHHHHHHHHHhhcCCcEEEEcCCCcccHHHHHhcCCCCceEeeecCCCCCCCCceEEEE
Q 021437 5 LSLMTFNLHEDQQEDSPNSWVKRRDLCISVITSYSPMILCTQQGVKSQLDYLQQCLPAYDQFGVSRKGPEDTSDEHCTIF 84 (312)
Q Consensus 5 l~v~T~Nv~~~~~~~~~~~w~~r~~~i~~~i~~~~pDIi~LQEv~~~~~~~l~~~l~~y~~~~~~~~~~~~~~~~~~ai~ 84 (312)
++++|||+.... .++...|...|..+|+..+|||||||||.+.-+..+.+.-..|..+.. ...+.+.++.
T Consensus 100 ~S~~~WnidgLd----ln~l~~RMrAv~H~i~l~sPdiiflQEV~p~~y~~~~K~~s~y~i~~~------~~~~~~~~~~ 169 (349)
T KOG2756|consen 100 FSLITWNIDGLD----LNNLSERMRAVCHYLALYSPDVIFLQEVIPPYYSYLKKRSSNYEIITG------HEEGYFTAIM 169 (349)
T ss_pred EEEEEeeccccc----cchHHHHHHHHHHHHHhcCCCEEEEeecCchhhHHHHHhhhheeEEEe------ccceeeeeee
Confidence 677778876432 234557999999999999999999999999877777662133433332 1234555555
Q ss_pred EeCCCcEEEeeeeEeccCCCCCCCCcccCccCCceEEEEEeeeccCCCCCcEEEEEeccCCC--ccHHHHHHHHHHHHHH
Q 021437 85 YDKEKVELLEGGTFWLSESPSVPGSKAWGAEVPCIATWATFQLKGVEPPGFSFQIVNTNMDE--FTARARRRSALLTWQH 162 (312)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~r~~~~~~~~~~~~~~~g~~~~v~~~Hl~~--~~~~~r~~~~~~l~~~ 162 (312)
...+++.+.....+.+.. ...-|-..++++... |..+.+.++||.+ .....|.+|....++.
T Consensus 170 l~~s~~~Vks~~~i~F~N-----------S~M~R~L~I~Ev~v~-----G~Kl~l~tsHLEStr~h~P~r~~qF~~~~~k 233 (349)
T KOG2756|consen 170 LKKSRVKVKSQEIIPFPN-----------SKMMRNLLIVEVNVS-----GNKLCLMTSHLESTRGHAPERMNQFKMVLKK 233 (349)
T ss_pred eehhhcCccccceeccCc-----------chhhheeEEEEEeec-----CceEEEEeccccCCCCCChHHHHHHHHHHHH
Confidence 566777776655443321 122377777777655 7789999999988 4566777777766666
Q ss_pred HHhc---CCCCCEEEEecCCCCCCchhHHhhhcccccCCccccccchhhhhhhcCCCCCcccccCCCCCCcchhHHHHHH
Q 021437 163 IASL---PPSLPVIYCGGFNTQKESTTGRFLLGRSREHGVVGDMRDAWPNARMRKNVSLIRTYHGFKGNKQGALEFLKLI 239 (312)
Q Consensus 163 l~~~---~~~~pvIv~GDfN~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 239 (312)
+++. .++..||++||+|-......--.+- .+..|+|..++..+ ....||..+..+..+|+
T Consensus 234 ~~EaIe~lPnA~ViFGGD~NlrD~ev~r~~lP---------D~~vDvWE~lg~p~--~~~FTwDT~~N~nl~G~------ 296 (349)
T KOG2756|consen 234 MQEAIESLPNATVIFGGDTNLRDREVTRCGLP---------DNIVDVWEFLGKPK--HCQFTWDTQMNSNLGGT------ 296 (349)
T ss_pred HHHHHHhCCCceEEEcCcccchhhhcccCCCC---------chHHHHHHHhCCCC--cCceeeecccCcccchh------
Confidence 5542 3678999999999754331100111 14789999886543 34578888777665543
Q ss_pred HhhhhccccCCCCCCceeEEEecCC----ceeeeeEEeecCC---CCCcCCCCCcceEEEEE
Q 021437 240 FRALCLCWDRQTQDLHIDWILFRGR----SLIPGSCEVVNDN---IDGYYPSSHYPIFAEFM 294 (312)
Q Consensus 240 ~~~~~~~~~~~~~~~riD~I~~s~~----~~~~~~~~v~~~~---~~~~~~SDH~pV~a~~~ 294 (312)
++ -..|+|+||.+-. .+.......++.. --+.++|||.++.++|.
T Consensus 297 -~a---------~k~RfDRi~~r~~~~~G~~~~~~l~l~g~~kiRgc~~fPSDHwgll~Tl~ 348 (349)
T KOG2756|consen 297 -AA---------CKLRFDRIFFRAAAEEGHIIPRSLDLLGLEKLRGCGRFPSDHWGLLCTLD 348 (349)
T ss_pred -HH---------HHHHHHHHhhhhhhhcCCcCccccchhhhhhhccCCCCCcccceeeeecc
Confidence 22 2489999999431 2333222222221 12468999999999985
No 15
>PF03372 Exo_endo_phos: Endonuclease/Exonuclease/phosphatase family Subset of Pfam family Subset of Pfam family; InterPro: IPR005135 This domain is found in a large number of proteins including magnesium dependent endonucleases and phosphatases involved in intracellular signalling []. Proteins this domain is found in include: AP endonuclease proteins (4.2.99.18 from EC), DNase I proteins (3.1.21.1 from EC), Synaptojanin an inositol-1,4,5-trisphosphate phosphatase (3.1.3.56 from EC) and Sphingomyelinase (3.1.4.12 from EC).; PDB: 2J63_A 2JC4_A 3TEB_B 3MTC_A 3N9V_B 1ZWX_A 2F1N_A 1Y21_A 1NTF_A 2IMQ_X ....
Probab=99.78 E-value=1.7e-17 Score=142.40 Aligned_cols=157 Identities=19% Similarity=0.254 Sum_probs=81.5
Q ss_pred EEeecCCCCCCCCCCcHH------HHHHHHHHHHhhcCCcEEEEcCCCcccH-HHHHhcC-CCCceEeeecCCCCC---C
Q 021437 8 MTFNLHEDQQEDSPNSWV------KRRDLCISVITSYSPMILCTQQGVKSQL-DYLQQCL-PAYDQFGVSRKGPED---T 76 (312)
Q Consensus 8 ~T~Nv~~~~~~~~~~~w~------~r~~~i~~~i~~~~pDIi~LQEv~~~~~-~~l~~~l-~~y~~~~~~~~~~~~---~ 76 (312)
|||||++ |. .+...|.+.|...+||||||||+..... +.+...+ ..+.+.......... .
T Consensus 1 ~T~Nv~~---------~~~~~~~~~~~~~i~~~i~~~~~Dii~LQEv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (249)
T PF03372_consen 1 MTWNVRG---------WNYRSDNDRKRREIAQWIAELDPDIIALQEVRNDDLSELLEEQLRGYLGYYGSFWPGNSPPSDA 71 (249)
T ss_dssp EEEEEST---------HHHHHHHHHHHHHHHHHHHHHT-SEEEEEEEESHHHHHHHHHHHHTCTTHEEEEEETSSSTTCS
T ss_pred CeEEeCc---------CcccccchhHHHHHHHHHHhcCCCEEEEecchhhhhhhhhhhhcccccccccceeccccccccc
Confidence 7999986 32 3445599999999999999999986432 2233333 222212211110000 1
Q ss_pred CCceEEEEEeCCCcEEEeeeeEeccCCCCCCCCcccCccCCceEEEEEeeeccCCCCCcEEEEEeccCCCccHHHHHHHH
Q 021437 77 SDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSKAWGAEVPCIATWATFQLKGVEPPGFSFQIVNTNMDEFTARARRRSA 156 (312)
Q Consensus 77 ~~~~~ai~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~r~~~~~~~~~~~~~~~g~~~~v~~~Hl~~~~~~~r~~~~ 156 (312)
.+.+++++++.+.............. +... . .....+....+.+... ++.|.|+++|+++.... +..+.
T Consensus 72 ~~~g~~i~~r~~~~~~~~~~~~~~~~-~~~~--~--~~~~~~~~~~~~~~~~-----~~~i~v~~~H~~~~~~~-~~~~~ 140 (249)
T PF03372_consen 72 GGYGVAILSRSPIFSSVSYVFSLFSK-PGIR--I--FRRSSKSKGIVPVSIN-----GKPITVVNVHLPSSNDE-RQEQW 140 (249)
T ss_dssp SSEEEEEEESSCCCEEEEEEEEEESS-STTC--E--EEEEEEEEEEEEEEEE-----TEEEEEEEEETTSHHHH-HHHHH
T ss_pred cCceEEEEEccccccccccccccccc-cccc--c--cccccccccccccccc-----ceEEEeeeccccccchh-hhhhh
Confidence 35679999997655444333221111 1000 0 0000000000111111 56899999999984333 33334
Q ss_pred HHHHHHHHhcC---CCCCEEEEecCCCCCCc
Q 021437 157 LLTWQHIASLP---PSLPVIYCGGFNTQKES 184 (312)
Q Consensus 157 ~~l~~~l~~~~---~~~pvIv~GDfN~~~~~ 184 (312)
..+++.+.... ...|+|||||||..+.+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~iv~GDfN~~~~~ 171 (249)
T PF03372_consen 141 RELLARIQKIYADNPNEPVIVMGDFNSRPDS 171 (249)
T ss_dssp HHHHHHHHHHHHTSSCCEEEEEEE-SS-BSS
T ss_pred hhhhhhhhhcccccccceEEEEeecccCCcc
Confidence 45666665432 22379999999988764
No 16
>COG2374 Predicted extracellular nuclease [General function prediction only]
Probab=99.76 E-value=1.9e-17 Score=155.58 Aligned_cols=187 Identities=18% Similarity=0.172 Sum_probs=131.3
Q ss_pred CccEEEEEeecCCCCC---CC-----------CCC---cHHHHHHHHHHHHhhcCCcEEEEcCCCcc--------cHHHH
Q 021437 2 SVALSLMTFNLHEDQQ---ED-----------SPN---SWVKRRDLCISVITSYSPMILCTQQGVKS--------QLDYL 56 (312)
Q Consensus 2 ~~~l~v~T~Nv~~~~~---~~-----------~~~---~w~~r~~~i~~~i~~~~pDIi~LQEv~~~--------~~~~l 56 (312)
.-.|||++|||.+... .+ +.. ..+.++.++...|..+++||++|-|+... ++..+
T Consensus 461 ~G~LkiasfNVlNyf~~~~~~g~~~~~~~d~rga~~~~e~~~Q~~k~v~ai~~ldaDV~GL~Eien~~~~~~s~~ai~~l 540 (798)
T COG2374 461 GGSLKIASFNVLNYFNKLSGDGGGASTFSDCRGANTTEEFARQRAKIVTAILTLDADVLGLMEIENNGYGTDSGDAIAQL 540 (798)
T ss_pred CceeeeeeeehhhhhccCCCCCCCccccccccCccchhHHHHHHHHHHHHHhhcchhhheeeeeeccCCCCCcHHHHHHH
Confidence 3469999999987543 11 111 12334578899999999999999999754 33333
Q ss_pred ----HhcC--C-CCceEeeecCCCCCCCCceEEEEEeCCCcEEEeeeeEeccCCCCCCCCcccCccCCceEEEEEeeecc
Q 021437 57 ----QQCL--P-AYDQFGVSRKGPEDTSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSKAWGAEVPCIATWATFQLKG 129 (312)
Q Consensus 57 ----~~~l--~-~y~~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~r~~~~~~~~~~~ 129 (312)
.+.+ + .|.++..++...-....+.++++|+.+++.+.....+.-......++ ..+....|-.+..+|+...
T Consensus 541 V~~lna~~G~~~~y~~v~p~~~~~lgtD~I~vg~iY~~~~V~~~g~~~~~~~~a~~~v~--~~~~~n~R~~laqtF~~~~ 618 (798)
T COG2374 541 VNALNAKAGAGTRYAFVAPGRNGGLGTDAIRVGFIYKPSAVSLVGKAAIVDNDAFLGVG--EIDDNNARPPLAQTFQDLS 618 (798)
T ss_pred HHHHHhhcCCCceEEEEecCccCCcCCCceeEEEEeccceEEecccccccccccccccc--cccccccCcchhhhhhhcc
Confidence 3333 3 68888777652122345779999999988887665443222111111 1123445766777888887
Q ss_pred CCCCCcEEEEEeccCCCcc----------------HHHHHHHHHHHHHHHHhcC---CCCCEEEEecCCCCCCchhHHhh
Q 021437 130 VEPPGFSFQIVNTNMDEFT----------------ARARRRSALLTWQHIASLP---PSLPVIYCGGFNTQKESTTGRFL 190 (312)
Q Consensus 130 ~~~~g~~~~v~~~Hl~~~~----------------~~~r~~~~~~l~~~l~~~~---~~~pvIv~GDfN~~~~~~~~~~l 190 (312)
+ +.+|.++..||++++ ...|.++++.|..+++... .+.+++++||||+...+.+++.|
T Consensus 619 ~---~ekfvvVvNHfkSKgs~~p~~gd~~dgQg~~~~~R~~~AqaL~~~la~~~~~~~d~~~viLGD~N~y~~edpI~~l 695 (798)
T COG2374 619 G---GEKFVVVVNHFKSKGSDCPVDGDTQDGQGNSNQTRVRAAQALAAFLATNPTGKADADIVILGDFNDYAFEDPIQAL 695 (798)
T ss_pred C---CcEEEEEEeeecccCCCCCCcccccccccchhhHHHHHHHHHHHHHhhCcccccCCCEEEEeccchhhhccHHHHH
Confidence 6 678999999999843 3589999999999999642 36799999999999999999999
Q ss_pred hcc
Q 021437 191 LGR 193 (312)
Q Consensus 191 ~~~ 193 (312)
...
T Consensus 696 ~~a 698 (798)
T COG2374 696 EGA 698 (798)
T ss_pred hhc
Confidence 874
No 17
>PRK15251 cytolethal distending toxin subunit CdtB; Provisional
Probab=99.75 E-value=8.1e-17 Score=137.67 Aligned_cols=157 Identities=12% Similarity=0.077 Sum_probs=91.8
Q ss_pred ccEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHhhc-CCcEEEEcCCCcccHH---------H------HHh---cC---
Q 021437 3 VALSLMTFNLHEDQQEDSPNSWVKRRDLCISVITSY-SPMILCTQQGVKSQLD---------Y------LQQ---CL--- 60 (312)
Q Consensus 3 ~~l~v~T~Nv~~~~~~~~~~~w~~r~~~i~~~i~~~-~pDIi~LQEv~~~~~~---------~------l~~---~l--- 60 (312)
..++|+|||+...... .+..|.. .+..+|... .+||+++||+-.-... . +.+ .+
T Consensus 23 ~~~~~~twn~qg~s~~-~~~kw~~---~v~~l~~~~~~~DIla~QEags~p~~a~~~~~~~~~~g~~~~v~ey~w~l~~~ 98 (271)
T PRK15251 23 EDYKVATWNLQGSSAS-TESKWNV---NVRQLLSGENPADILMVQEAGSLPSSAVPTGRHVQPGGVGIPIDEYTWNLGTR 98 (271)
T ss_pred ccceEEEeecCCCCCC-Chhhhhh---hHHHHhcCCCCCCEEEEEecCCCccccccccccccccccccCcccEEEEccCc
Confidence 3589999999865322 1334542 466777764 6999999998542111 0 000 01
Q ss_pred --CCCceEeeecCCCCCCCCceEEEEEeCCCcEEEeeeeEeccCCCCCCCCcccCccCCceEEEEEeeeccCCCCCcEEE
Q 021437 61 --PAYDQFGVSRKGPEDTSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSKAWGAEVPCIATWATFQLKGVEPPGFSFQ 138 (312)
Q Consensus 61 --~~y~~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~r~~~~~~~~~~~~~~~g~~~~ 138 (312)
+++.|+...+.+ -.....+.||+.| ++..+... +.. | ....|.++.+++ + .+.
T Consensus 99 srpgm~YiY~~aiD-~~ggr~glAIlSr---~~a~~~~~--l~~-p---------~~~~Rpilgi~i--------~-~~~ 153 (271)
T PRK15251 99 SRPNQVYIYYSRVD-VGANRVNLAIVSR---RRADEVIV--LRP-P---------TVASRPIIGIRI--------G-NDV 153 (271)
T ss_pred cCCCceEEEEeccc-CCCCceeEEEEec---ccccceEE--ecC-C---------CCcccceEEEEe--------c-CeE
Confidence 233333322221 1112234566644 33332222 211 2 122466666665 2 379
Q ss_pred EEeccCCCccHHHHHHHHHHHHHHHH-hcCCCCCEEEEecCCCCCCchhHHh
Q 021437 139 IVNTNMDEFTARARRRSALLTWQHIA-SLPPSLPVIYCGGFNTQKESTTGRF 189 (312)
Q Consensus 139 v~~~Hl~~~~~~~r~~~~~~l~~~l~-~~~~~~pvIv~GDfN~~~~~~~~~~ 189 (312)
++++|+.+.+...+..+++.+.++.. ... +.|+++|||||..|++..+..
T Consensus 154 ffstH~~a~~~~da~aiV~~I~~~f~~~~~-~~pw~I~GDFNr~P~sl~~~l 204 (271)
T PRK15251 154 FFSIHALANGGTDAGAIVRAVHNFFRPNMR-HINWMIAGDFNRSPDRLESTL 204 (271)
T ss_pred EEEeeecCCCCccHHHHHHHHHHHHhhccC-CCCEEEeccCCCCCcchhhhh
Confidence 99999999755567888888888887 433 479999999999999864433
No 18
>COG5239 CCR4 mRNA deadenylase, exonuclease subunit and related nucleases [RNA processing and modification]
Probab=99.72 E-value=3.5e-17 Score=142.09 Aligned_cols=183 Identities=19% Similarity=0.307 Sum_probs=110.1
Q ss_pred cEEEEEeecCCCC-------CCC-CCCcHHHHHHHHHHHHhhcCCcEEEEcCCCcccHHHHH-hcC--CCCceEeeecCC
Q 021437 4 ALSLMTFNLHEDQ-------QED-SPNSWVKRRDLCISVITSYSPMILCTQQGVKSQLDYLQ-QCL--PAYDQFGVSRKG 72 (312)
Q Consensus 4 ~l~v~T~Nv~~~~-------~~~-~~~~w~~r~~~i~~~i~~~~pDIi~LQEv~~~~~~~l~-~~l--~~y~~~~~~~~~ 72 (312)
+++|||||+.+.. +.. ....|..|.+.|.+.|..++|||+|||||...+++++- +.| .+|..+......
T Consensus 30 ~ftimTYN~Laq~y~~r~~y~~s~~aL~W~~R~~~L~~EL~~Yn~Di~CLQEvd~~~~~~fw~~~l~~~gY~~if~~k~~ 109 (378)
T COG5239 30 DFTIMTYNVLAQTYATRKMYPYSGWALKWSYRSRLLLQELLYYNADILCLQEVDAEDFEDFWKDQLGKLGYDGIFIPKER 109 (378)
T ss_pred eeEEEehhhhhhhhccccccCCchhhhhhHHHHHHHHHHHhccCCceeeeehhhhhHHHHHHHHHhcccccceEEecCCC
Confidence 4999999997643 222 25579999999999999999999999999988876443 444 467755433321
Q ss_pred ------CC-CCCCceEEEEEeC----CCcEEEee--eeEeccCCCC-----------CCCCcccCccCCceEEEEEeeec
Q 021437 73 ------PE-DTSDEHCTIFYDK----EKVELLEG--GTFWLSESPS-----------VPGSKAWGAEVPCIATWATFQLK 128 (312)
Q Consensus 73 ------~~-~~~~~~~ai~~~~----~~~~~~~~--~~~~l~~~p~-----------~~~~~~~~~~~~r~~~~~~~~~~ 128 (312)
.- .....+++|++++ +++-++-. -.++..-... +.+.+ +...-++.++.+.++
T Consensus 110 k~~~m~~~d~t~~dGc~if~k~~~~~sk~~li~~~~~~f~~p~~~~er~r~t~~~lnri~e~---~~~~w~~l~~~l~n~ 186 (378)
T COG5239 110 KVKWMIDYDTTKVDGCAIFLKRFIDSSKLGLILAVTHLFWHPYGYYERFRQTYILLNRIGEK---DNIAWVCLFVGLFNK 186 (378)
T ss_pred cccccccccccccceEEEEEEeccccchhhhhhhhhHhhcccceeehhhhHHHHHHHHHhhh---hhcchhheeeeeccC
Confidence 00 0245679999886 33111100 0011000000 00000 000011233444455
Q ss_pred cCCCCCcEEEEEeccCCCc--cHHHHHHHHHHHHHHHHhcC-------------C---CCCEEEEecCCCCCCchhHHhh
Q 021437 129 GVEPPGFSFQIVNTNMDEF--TARARRRSALLTWQHIASLP-------------P---SLPVIYCGGFNTQKESTTGRFL 190 (312)
Q Consensus 129 ~~~~~g~~~~v~~~Hl~~~--~~~~r~~~~~~l~~~l~~~~-------------~---~~pvIv~GDfN~~~~~~~~~~l 190 (312)
.+ |.++.+.+||+++. ..+...-|...++++++... + ..++.++||||....+..|..+
T Consensus 187 e~---gd~~~va~Th~~w~~~~~dvk~iq~s~l~~~~k~~~~e~~~~d~~~~d~k~~~~~~~l~~gd~ns~~~s~vy~~l 263 (378)
T COG5239 187 EP---GDTPYVANTHLPWDPKYRDVKLIQCSLLYRELKKVLKEELNDDKEEGDIKSYPEVDILITGDFNSLRASLVYKFL 263 (378)
T ss_pred CC---CCceeEEeccccccCCCCchheehhhHHHHHHHHHhhhcCCcchhccccccCcccccccCCCccceecceehhhh
Confidence 43 89999999999874 44555556666666665321 1 1266999999999888888777
Q ss_pred hc
Q 021437 191 LG 192 (312)
Q Consensus 191 ~~ 192 (312)
.+
T Consensus 264 ~~ 265 (378)
T COG5239 264 VT 265 (378)
T ss_pred hh
Confidence 65
No 19
>COG3021 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=99.71 E-value=7.3e-17 Score=139.15 Aligned_cols=215 Identities=24% Similarity=0.235 Sum_probs=122.9
Q ss_pred cEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHhhcCCcEEEEcCCCcccHH---HHHhcCCCCceEeeecCCCCCCCCce
Q 021437 4 ALSLMTFNLHEDQQEDSPNSWVKRRDLCISVITSYSPMILCTQQGVKSQLD---YLQQCLPAYDQFGVSRKGPEDTSDEH 80 (312)
Q Consensus 4 ~l~v~T~Nv~~~~~~~~~~~w~~r~~~i~~~i~~~~pDIi~LQEv~~~~~~---~l~~~l~~y~~~~~~~~~~~~~~~~~ 80 (312)
.++++++|+++.+.. ...++..+...++|+|.+||+...+-. .+.+ .|.++...... .....
T Consensus 88 ~~~~l~~N~r~~n~~---------~~k~Lsl~~~~~~D~v~~~E~~~~~~~~~~~l~~---~yP~~~~~~~~---~~~~~ 152 (309)
T COG3021 88 LLWNLQKNVRFDNAS---------VAKLLSLIQQLDADAVTTPEGVQLWTAKVGALAA---QYPAFILCQHP---TGVFT 152 (309)
T ss_pred hhhhhhhhccccCcC---------HHHHHHHHhhhCcchhhhHHHHHHhHhHHHHHHH---hCCceeecCCC---CCeee
Confidence 467888998876543 356777888888999999998865432 3344 45444332221 11222
Q ss_pred EEEEEeCCCcEEEeeeeEeccCCCCCCCCcccCccCCceEEEEEeeeccCCCCCcEEEEEeccCCC---ccHHHHHHHHH
Q 021437 81 CTIFYDKEKVELLEGGTFWLSESPSVPGSKAWGAEVPCIATWATFQLKGVEPPGFSFQIVNTNMDE---FTARARRRSAL 157 (312)
Q Consensus 81 ~ai~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~r~~~~~~~~~~~~~~~g~~~~v~~~Hl~~---~~~~~r~~~~~ 157 (312)
.+++.+.......+ .. +- ...++........+. +|..+.+++.|... .....| +|..
T Consensus 153 ~a~~sr~~~~~~~~-~e------~~--------~~~pk~~~~t~~~~~----~g~~l~v~~lh~~~~~~~~~~~~-~ql~ 212 (309)
T COG3021 153 LAILSRRPCCPLTE-AE------PW--------LRLPKSALATAYPLP----DGTELTVVALHAVNFPVGTDPQR-AQLL 212 (309)
T ss_pred eeeccccccccccc-cC------cc--------ccCCccceeEEEEcC----CCCEEEEEeeccccccCCccHHH-HHHH
Confidence 34444332111111 00 00 011222222222222 28899999999974 223334 6666
Q ss_pred HHHHHHHhcCCCCCEEEEecCCCCCCchhHHhhhcccccCCccccccchhhhhhhcCCCCCcccccCCCCCCcchhHHHH
Q 021437 158 LTWQHIASLPPSLPVIYCGGFNTQKESTTGRFLLGRSREHGVVGDMRDAWPNARMRKNVSLIRTYHGFKGNKQGALEFLK 237 (312)
Q Consensus 158 ~l~~~l~~~~~~~pvIv~GDfN~~~~~~~~~~l~~~~~~~g~~~~l~d~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~ 237 (312)
.+.+.+.... .|+|++||||+.|.+..++-+..- | ..+.+..++. ....+++.....
T Consensus 213 ~l~~~i~~~~--gpvIlaGDfNa~pWS~~~~R~~~l----~----~~~~~~~aG~----~~~~~~p~~~~r--------- 269 (309)
T COG3021 213 ELGDQIAGHS--GPVILAGDFNAPPWSRTAKRMAAL----G----GLRAAPRAGL----WEVRFTPDERRR--------- 269 (309)
T ss_pred HHHHHHHcCC--CCeEEeecCCCcchhHHHHHHHHh----c----ccccchhccC----CccccCHHHHhh---------
Confidence 7777777664 799999999999998765544430 0 1344433321 112233221110
Q ss_pred HHHhhhhccccCCCCCCceeEEEecCCceeeeeEEeecCCCCCcCCCCCcceEEEEEec
Q 021437 238 LIFRALCLCWDRQTQDLHIDWILFRGRSLIPGSCEVVNDNIDGYYPSSHYPIFAEFMLP 296 (312)
Q Consensus 238 ~~~~~~~~~~~~~~~~~riD~I~~s~~~~~~~~~~v~~~~~~~~~~SDH~pV~a~~~~~ 296 (312)
+ .+.+|||||+++ +.+...+.+.. ..|||.||+++|+..
T Consensus 270 -~------------~g~PIDhvf~rg--l~~~ka~rl~~-----~gSDH~PLLveF~~~ 308 (309)
T COG3021 270 -A------------FGLPIDHVFYRG--LTVMKARRLPD-----RGSDHRPLLVEFSYG 308 (309)
T ss_pred -c------------cCCCcceeeecC--cchhhhhhccc-----cCCCCCceEEEEEec
Confidence 0 468899999998 66665554443 579999999999864
No 20
>KOG0620 consensus Glucose-repressible alcohol dehydrogenase transcriptional effector CCR4 and related proteins [Transcription]
Probab=99.62 E-value=1.1e-15 Score=137.28 Aligned_cols=185 Identities=21% Similarity=0.313 Sum_probs=106.3
Q ss_pred cEEEEEeecCCCCC---------CCCCCcHHHHHHHHHHHHhhcCCcEEEEcCCCcccHHHHHhcC--CCCceEeeecCC
Q 021437 4 ALSLMTFNLHEDQQ---------EDSPNSWVKRRDLCISVITSYSPMILCTQQGVKSQLDYLQQCL--PAYDQFGVSRKG 72 (312)
Q Consensus 4 ~l~v~T~Nv~~~~~---------~~~~~~w~~r~~~i~~~i~~~~pDIi~LQEv~~~~~~~l~~~l--~~y~~~~~~~~~ 72 (312)
+++|+|||+.+... ......|..|+..+.+.|...+||++||||| ...-+.+...| .+|.-....+..
T Consensus 19 ~~~v~s~n~l~~~~~~~~~~~~~~~~~~~w~~r~~~~~~ei~~~~ad~icLqev-~~~~~~~~p~l~~~gY~g~~~~k~~ 97 (361)
T KOG0620|consen 19 TFTVLSYNILSQLYATSKLYMYCPSWALSWEYRRQLLLEEILNYNADILCLQEV-DRYHDFFSPELEASGYSGIFIEKTR 97 (361)
T ss_pred eEEeechhhhhhhhcccCCCcccchhhccHHHHHHHHHHHHhCCCcceeecchh-hHHHHHccchhhhcCCcceeecccc
Confidence 58999999987531 1235679999999999999999999999999 22223333333 477765544211
Q ss_pred ---CCCCCCceEEEEEeCCCcEEEeeeeEeccCCCC--CCCCcc-c--CccCCceEE-EEEeeeccCCCCCcEEEE----
Q 021437 73 ---PEDTSDEHCTIFYDKEKVELLEGGTFWLSESPS--VPGSKA-W--GAEVPCIAT-WATFQLKGVEPPGFSFQI---- 139 (312)
Q Consensus 73 ---~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~p~--~~~~~~-~--~~~~~r~~~-~~~~~~~~~~~~g~~~~v---- 139 (312)
.......++|||+++++|+++....+.+..... ...... . -.....+.. ...++... +..+.+
T Consensus 98 ~~~~~~~~~dGcaiffk~s~f~li~~~~i~~n~~~~~~~~~~~~~~~~~~~~d~~~~~l~~L~~~~----~~~~~~~~~~ 173 (361)
T KOG0620|consen 98 MGEVELEKIDGCAIFFKPSLFQLIHSSAIELNQLALSRLPPNIAQLNRLTTLDNSGNKLVSLKAEL----GNMVSLPHLL 173 (361)
T ss_pred cchhhcccCceeeeeecchHHhhhhhhhhhhHHHHHhhcchhHHHHHhhhccccccchhhhhhhhc----CCceeecccc
Confidence 011235679999999999998655444333211 000000 0 000001111 11222221 333333
Q ss_pred Eec--cCCCccHHHHHHHHHHHHHHHH--------h-----c---CCCCCEEEEecCCCCCCchhHHhhhcc
Q 021437 140 VNT--NMDEFTARARRRSALLTWQHIA--------S-----L---PPSLPVIYCGGFNTQKESTTGRFLLGR 193 (312)
Q Consensus 140 ~~~--Hl~~~~~~~r~~~~~~l~~~l~--------~-----~---~~~~pvIv~GDfN~~~~~~~~~~l~~~ 193 (312)
+|+ |++......+.-|+..+...+. . . ....|+++|||||..+.+..|..+...
T Consensus 174 ~n~h~~~~~~~~~vkl~qv~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~gdfNs~p~~~v~~~~~~~ 245 (361)
T KOG0620|consen 174 LNTHILWDLPYEDVKLFQVLTLLLELAPLSPEILKIYREGNLATRIASFPLLLCGDFNSTPLSPVYALLASG 245 (361)
T ss_pred ccceeccCCCccchHHHHHHHHhhcccccchhhhhhhccccccccccccceeeeccccCCCCccceeecccC
Confidence 344 4555555666666666555421 0 0 124799999999999998887766553
No 21
>smart00128 IPPc Inositol polyphosphate phosphatase, catalytic domain homologues. Mg(2+)-dependent/Li(+)-sensitive enzymes.
Probab=99.44 E-value=9.6e-12 Score=110.98 Aligned_cols=158 Identities=15% Similarity=0.104 Sum_probs=87.5
Q ss_pred ccEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHhh-------cCCcE--EEEcCCCcc---------------cHHHHHh
Q 021437 3 VALSLMTFNLHEDQQEDSPNSWVKRRDLCISVITS-------YSPMI--LCTQQGVKS---------------QLDYLQQ 58 (312)
Q Consensus 3 ~~l~v~T~Nv~~~~~~~~~~~w~~r~~~i~~~i~~-------~~pDI--i~LQEv~~~---------------~~~~l~~ 58 (312)
-.+-|+||||....... ...+.+.|.. .+||| |+|||+... +...+..
T Consensus 3 ~~v~v~TwNv~~~~~~p--------~~~l~~~l~~~~~~~~~~~pDI~viglQEi~~~~~~~~~~~~~~~~~~W~~~i~~ 74 (310)
T smart00128 3 IKVLVGTWNVGGLKADP--------KVDVTSWLFQKIDVKQSEKPDIYVIGLQEVVDLENGVLLETIAGKERLWSKLIES 74 (310)
T ss_pred eEEEEEEEECCCccCCC--------hhhHHHhhccccccccCCCCCEEEEEeeeecccchhhhhhccchhHHHHHHHHHH
Confidence 35789999998753111 1123334333 67999 789998321 1233445
Q ss_pred cCC-CCceEeeecCCCCCCCCceEEEEEeCCCcEEEe-eeeEeccCCCCCCCCcccCccCCceEEEEEeeeccCCCCCcE
Q 021437 59 CLP-AYDQFGVSRKGPEDTSDEHCTIFYDKEKVELLE-GGTFWLSESPSVPGSKAWGAEVPCIATWATFQLKGVEPPGFS 136 (312)
Q Consensus 59 ~l~-~y~~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~-~~~~~l~~~p~~~~~~~~~~~~~r~~~~~~~~~~~~~~~g~~ 136 (312)
.|. +..|...... ...+.+..++.+......+. ....... .|-. +...++-+..+.+... +..
T Consensus 75 ~l~~~~~Y~~v~~~---~l~gi~l~vf~~~~~~~~i~~v~~~~v~-----~G~~--~~~~nKG~v~i~~~~~-----~~~ 139 (310)
T smart00128 75 SLNGDGQYNVLAKV---RLVGILVLVFVKANHLVYIKDVETFTVK-----TGMG--GLWGNKGAVAVRFKLS-----DTS 139 (310)
T ss_pred hcCCCCceEEEeee---eecceEEEEEEehhhcCccceeEeeeee-----cccc--ceeecCceEEEEEEEc-----CcE
Confidence 553 2445444332 13456677777654322111 1111010 1100 1112344555666655 669
Q ss_pred EEEEeccCCCcc--HHHHHHHHHHHHHHHHh-------cCCCCCEEEEecCCCCCC
Q 021437 137 FQIVNTNMDEFT--ARARRRSALLTWQHIAS-------LPPSLPVIYCGGFNTQKE 183 (312)
Q Consensus 137 ~~v~~~Hl~~~~--~~~r~~~~~~l~~~l~~-------~~~~~pvIv~GDfN~~~~ 183 (312)
+.++++||++.. ...|.++...+++.+.- ......+|++||||-.-+
T Consensus 140 ~~fv~~HL~a~~~~~~~R~~~~~~I~~~~~f~~~~~~~~~~~d~~f~~GDlNyRi~ 195 (310)
T smart00128 140 FCFVNSHLAAGASNVEQRNQDYKTILRALSFPERAELSQFDHDVVFWFGDLNFRLD 195 (310)
T ss_pred EEEEeeccccccchhhhhHHHHHHHHHhcCCCCCccccccccceEEEecCcceeec
Confidence 999999999843 35677778887766531 113578999999997544
No 22
>KOG0566 consensus Inositol-1,4,5-triphosphate 5-phosphatase (synaptojanin), INP51/INP52/INP53 family [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.08 E-value=3.6e-09 Score=102.27 Aligned_cols=158 Identities=13% Similarity=0.098 Sum_probs=87.3
Q ss_pred EEEEEeecCCCCCCCCCCcHHHHHHHHHHH--HhhcC-Cc--EEEEcCCCcc---------------cHHHHHhcCCCC-
Q 021437 5 LSLMTFNLHEDQQEDSPNSWVKRRDLCISV--ITSYS-PM--ILCTQQGVKS---------------QLDYLQQCLPAY- 63 (312)
Q Consensus 5 l~v~T~Nv~~~~~~~~~~~w~~r~~~i~~~--i~~~~-pD--Ii~LQEv~~~---------------~~~~l~~~l~~y- 63 (312)
|-|.||||........ ..=..+|... ..+.. +| +|+||||..= +.+.+.+.|.+|
T Consensus 539 IfvgTfNvNG~s~~~k----~~L~~WLfp~s~~~~~~~aDIyviG~eEvVeLnag~iv~As~tk~~~Wee~i~~~Ln~~~ 614 (1080)
T KOG0566|consen 539 IFVGTFNVNGRSAAFK----DDLSDWLFPISRGKEFSPADIYVIGFEEVVELNAGNIVSASTTKRRFWEEKILKTLNRYK 614 (1080)
T ss_pred EEEEeeeccCccccch----hhHHhhccccccCCcCCcCcEEEEeehhhhhcCccceeccChHHHHHHHHHHHHHhcCCC
Confidence 5688999986221110 0111334333 33333 77 4689997420 223455555443
Q ss_pred -ceEeeecCCCCCCCCceEEEEEeCCCcEEEeeeeEeccCCCCCCCCccc-CccCCceEEEEEeeeccCCCCCcEEEEEe
Q 021437 64 -DQFGVSRKGPEDTSDEHCTIFYDKEKVELLEGGTFWLSESPSVPGSKAW-GAEVPCIATWATFQLKGVEPPGFSFQIVN 141 (312)
Q Consensus 64 -~~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~p~~~~~~~~-~~~~~r~~~~~~~~~~~~~~~g~~~~v~~ 141 (312)
.|+..... ...|....+|.+....+.+......-. +.|+ |..-+.-++..+|....| .|.+++
T Consensus 615 ~kYvlL~s~---QlvGv~L~iF~r~~~~p~Ik~V~~~tk-------KTGfGG~tgNKGAVAIrf~~~~T-----sfCFv~ 679 (1080)
T KOG0566|consen 615 NKYVLLRSE---QLVGVCLLLFIRPDHAPYIKDVAGDTK-------KTGFGGATGNKGAVAIRFVYHAT-----SFCFVC 679 (1080)
T ss_pred CceEEEehh---hhheeeEEEEEcccccchhhhccccee-------ecccccccCCCceEEEEEEeccc-----cEEEEe
Confidence 45544332 123444556666555444332211111 1122 233456666678877744 899999
Q ss_pred ccCCCcc--HHHHHHHHHHHHHHHH-----hcCCCCCEEEEecCCCC
Q 021437 142 TNMDEFT--ARARRRSALLTWQHIA-----SLPPSLPVIYCGGFNTQ 181 (312)
Q Consensus 142 ~Hl~~~~--~~~r~~~~~~l~~~l~-----~~~~~~pvIv~GDfN~~ 181 (312)
.||.+.. -+.|.+....|.+.|+ .+..+..++.|||||-.
T Consensus 680 SHlAAG~snv~ERn~DY~tI~r~l~Fp~Gr~I~~HD~ifW~GDFNYR 726 (1080)
T KOG0566|consen 680 SHLAAGQSNVEERNEDYKTIARKLRFPRGRMIFSHDYIFWLGDFNYR 726 (1080)
T ss_pred cccccccchHhhhhhhHHHHHHhccccCCccccCCceEEEeccccee
Confidence 9998853 3466667777777664 23456789999999954
No 23
>PF14529 Exo_endo_phos_2: Endonuclease-reverse transcriptase ; PDB: 2EI9_A 1WDU_B.
Probab=98.65 E-value=5.9e-08 Score=74.05 Aligned_cols=42 Identities=26% Similarity=0.414 Sum_probs=22.7
Q ss_pred EEEEeccCCCccHHHHHHHHHHHHHHHHhcCCCCCEEEEecCCCC
Q 021437 137 FQIVNTNMDEFTARARRRSALLTWQHIASLPPSLPVIYCGGFNTQ 181 (312)
Q Consensus 137 ~~v~~~Hl~~~~~~~r~~~~~~l~~~l~~~~~~~pvIv~GDfN~~ 181 (312)
|.|++++.++.. .+..-...+.+.++..... ++||+||||..
T Consensus 1 i~i~~vY~pp~~--~~~~~~~~l~~~~~~~~~~-~~Ii~GDFN~~ 42 (119)
T PF14529_consen 1 ITIISVYAPPSS--EREEFFDQLRQLLKNLPPA-PIIIGGDFNAH 42 (119)
T ss_dssp EEEEEEE--TTS---CHHHHHHHHHHHHCCTTS-SEEEEEE----
T ss_pred CEEEEEECCCCc--cHHHHHHHHHHHHHhCCCC-CEEEEeECCCC
Confidence 578888888765 2233334455555655433 99999999984
No 24
>COG5411 Phosphatidylinositol 5-phosphate phosphatase [Signal transduction mechanisms]
Probab=98.39 E-value=2.1e-06 Score=77.41 Aligned_cols=57 Identities=18% Similarity=0.144 Sum_probs=41.5
Q ss_pred EEEEEeeeccCCCCCcEEEEEeccCCCc--cHHHHHHHHHHHHHHHHh-----cCCCCCEEEEecCCCC
Q 021437 120 ATWATFQLKGVEPPGFSFQIVNTNMDEF--TARARRRSALLTWQHIAS-----LPPSLPVIYCGGFNTQ 181 (312)
Q Consensus 120 ~~~~~~~~~~~~~~g~~~~v~~~Hl~~~--~~~~r~~~~~~l~~~l~~-----~~~~~pvIv~GDfN~~ 181 (312)
+.-++|.... ..+.++|+|+.+. ..+.|....+.+..-|.- +..+..++++||||..
T Consensus 155 av~i~~~~~~-----t~~cFv~shlaag~~N~eeR~~Dy~~I~~~i~f~~g~~I~~hdti~w~GDlNyR 218 (460)
T COG5411 155 AVAIRFNYER-----TSFCFVNSHLAAGVNNIEERIFDYRSIASNICFSRGLRIYDHDTIFWLGDLNYR 218 (460)
T ss_pred ccceeEEeec-----CCcEEEecchhcccccHHHHHHHHHHHHHheecCCCceecccceEEEecccCce
Confidence 3335565553 3799999999884 567888888888887753 2345679999999954
No 25
>PLN03191 Type I inositol-1,4,5-trisphosphate 5-phosphatase 2; Provisional
Probab=98.37 E-value=7.4e-06 Score=77.42 Aligned_cols=41 Identities=20% Similarity=0.257 Sum_probs=29.9
Q ss_pred CCCceeEEEecCCceeeeeEEeecCCCCCcCCCCCcceEEEEEecC
Q 021437 252 QDLHIDWILFRGRSLIPGSCEVVNDNIDGYYPSSHYPIFAEFMLPR 297 (312)
Q Consensus 252 ~~~riD~I~~s~~~~~~~~~~v~~~~~~~~~~SDH~pV~a~~~~~~ 297 (312)
.+..=|+||+.+..++...+.. .....|||.||.|.|.+.-
T Consensus 553 ~PSWCDRILykg~~i~~l~Y~s-----~ei~~SDHRPV~A~F~v~V 593 (621)
T PLN03191 553 SPAWCDRILWLGKGIKQLCYKR-----SEIRLSDHRPVSSMFLVEV 593 (621)
T ss_pred ccchhheEeecCCCceEeEecc-----CCcccCCchhcceEEEEEE
Confidence 4556899999875566666653 1246799999999998763
No 26
>KOG1294 consensus Apurinic/apyrimidinic endonuclease and related enzymes [Replication, recombination and repair]
Probab=98.07 E-value=3.2e-05 Score=69.09 Aligned_cols=149 Identities=21% Similarity=0.260 Sum_probs=72.3
Q ss_pred EEEEEeccCCCccH-----HHH--HHHHHHHHHHHHhcCC----CCCEEEEecCCCCCCchh----HHhhhccc-ccCCc
Q 021437 136 SFQIVNTNMDEFTA-----RAR--RRSALLTWQHIASLPP----SLPVIYCGGFNTQKESTT----GRFLLGRS-REHGV 199 (312)
Q Consensus 136 ~~~v~~~Hl~~~~~-----~~r--~~~~~~l~~~l~~~~~----~~pvIv~GDfN~~~~~~~----~~~l~~~~-~~~g~ 199 (312)
.+.++++|.+.... .-+ .+-...+...+..... ..+++.+||+|..+.... +..-.+.. ...|+
T Consensus 168 ~~~l~~~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~v~~gd~nvs~~~i~~~~~~~~~~~~~~~~~~~ 247 (335)
T KOG1294|consen 168 IFILINTYVPNIGGGLVNLVYRILDRWDKEIEEKRKKQSSSKNLKAPVVICGDLNVSHEEIDPSKPLVSPAGNTLSNAGF 247 (335)
T ss_pred ceeeccccCcccccccchhhhhhhhhhHHHHHHHhhhccccccccCcceeccccccchhhccccccccccccCCcCCCCC
Confidence 68899999987322 111 2222333444444332 348999999998764321 22111111 11111
Q ss_pred cccccchh-hhhhhcCCCCCcccccCCCCCCcchhHHHHHHHhhhhccccCCCCCCceeEEEecCCce-eeeeEEeecCC
Q 021437 200 VGDMRDAW-PNARMRKNVSLIRTYHGFKGNKQGALEFLKLIFRALCLCWDRQTQDLHIDWILFRGRSL-IPGSCEVVNDN 277 (312)
Q Consensus 200 ~~~l~d~~-~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~riD~I~~s~~~~-~~~~~~v~~~~ 277 (312)
-..-.+.+ ......+ ....||.........+..+++..|+...- +.+.|+||++|+.+.. ...++.|....
T Consensus 248 t~e~R~~~~~~~~~~~--~~iDt~r~~~~~~~~~~t~Wk~~~~~r~~-----~~~~r~dy~~Vsk~~~n~~r~~~Ic~r~ 320 (335)
T KOG1294|consen 248 TPEERDSFFAELLEKG--PLIDTYRELHKDQKKAYTFWKYMPNGRQR-----GHGERCDYILVSKPGPNNGRRFYICSRP 320 (335)
T ss_pred CHHHhhhHHHhhccCC--cceeehhhhcCCccccccchhhccccccC-----CCCCceeEEEecCcCCCCCceeeeecCc
Confidence 10111111 0000000 01223333322222233333344433322 2578999999998644 34567766542
Q ss_pred CCCcCCCCCcceEEEEE
Q 021437 278 IDGYYPSSHYPIFAEFM 294 (312)
Q Consensus 278 ~~~~~~SDH~pV~a~~~ 294 (312)
...|||+||.+.|.
T Consensus 321 ---~~gsdh~pi~~~~~ 334 (335)
T KOG1294|consen 321 ---IHGSDHCPITLEFF 334 (335)
T ss_pred ---cCCCCCCCeeeeec
Confidence 34699999998875
No 27
>PTZ00312 inositol-1,4,5-triphosphate 5-phosphatase; Provisional
Probab=94.59 E-value=0.15 Score=44.38 Aligned_cols=51 Identities=18% Similarity=0.312 Sum_probs=37.8
Q ss_pred CcEEEEEeccCCCc-------------cHHHHHHHHHHHHHHHHhc-CCCCCEEEEecCCCCCCc
Q 021437 134 GFSFQIVNTNMDEF-------------TARARRRSALLTWQHIASL-PPSLPVIYCGGFNTQKES 184 (312)
Q Consensus 134 g~~~~v~~~Hl~~~-------------~~~~r~~~~~~l~~~l~~~-~~~~pvIv~GDfN~~~~~ 184 (312)
+..|.++|+||-+. ....|.++...+++.+.+. .+..++++.||||..-+.
T Consensus 79 ~t~fdfVNiHLFHDaSNl~A~~tSPSiYS~~RqrAL~~iL~r~~~~~~~~~~lF~fGDfNyRld~ 143 (356)
T PTZ00312 79 TVVVNVLNVHLYNDDDNRVAAASSPSLYTGQRQEALLEAIAECSAFISPSDPLFIFGDFNVRLDG 143 (356)
T ss_pred CEEEEEEEeeccCCcchhhHHhcCCchhHHHHHHHHHHHHHHHhhccCCCCcEEEeccceeeecc
Confidence 56899999999551 3456777888888666554 456899999999975543
No 28
>KOG1976 consensus Inositol polyphosphate 5-phosphatase, type I [Lipid transport and metabolism]
Probab=93.34 E-value=0.22 Score=43.48 Aligned_cols=59 Identities=20% Similarity=0.316 Sum_probs=43.0
Q ss_pred EEeeeccCCCCCcEEEEEeccCCC-------------ccHHHHHHHHHHHHHHHHhcC-CCCCEEEEecCCCCCCchh
Q 021437 123 ATFQLKGVEPPGFSFQIVNTNMDE-------------FTARARRRSALLTWQHIASLP-PSLPVIYCGGFNTQKESTT 186 (312)
Q Consensus 123 ~~~~~~~~~~~g~~~~v~~~Hl~~-------------~~~~~r~~~~~~l~~~l~~~~-~~~pvIv~GDfN~~~~~~~ 186 (312)
+++... |+.|.++|.||=. ..+..|.++...++..|.+.. ....++|.||||..-++..
T Consensus 162 ~r~~I~-----~k~fdfVN~hLFhD~snla~~~sspt~ys~~R~~al~~vL~el~~~~~~~~~~fVfGdfNfrLds~s 234 (391)
T KOG1976|consen 162 ARFRIH-----GKEFDFVNLHLFHDVSNLATKNSSPTKYSSKREQALEMVLKELDEEGLRNDAIFVFGDFNFRLDSTS 234 (391)
T ss_pred eeEEEc-----CceeeeeehhhhcchhhhhhhcCChhhhhhhHHHHHHHHHHHHHhhccCceEEEEecccccccchHH
Confidence 455555 7899999999932 223468888888888887542 3458899999998776643
No 29
>PLN03191 Type I inositol-1,4,5-trisphosphate 5-phosphatase 2; Provisional
Probab=75.37 E-value=2.8 Score=40.67 Aligned_cols=49 Identities=10% Similarity=0.145 Sum_probs=32.5
Q ss_pred CcEEEEEeccCCCcc----HHHHHHHHHHHHHHHHh-----------cCCCCCEEEEecCCCCC
Q 021437 134 GFSFQIVNTNMDEFT----ARARRRSALLTWQHIAS-----------LPPSLPVIYCGGFNTQK 182 (312)
Q Consensus 134 g~~~~v~~~Hl~~~~----~~~r~~~~~~l~~~l~~-----------~~~~~pvIv~GDfN~~~ 182 (312)
+..|.++|+||.+.. ...|......|++.+.= +..+..+|++||||-.-
T Consensus 419 ~Ts~cFVn~HLAAg~~~~~~~rRN~D~~~I~~~l~F~~~~~~~~~~~I~dhD~vFWlGDLNYRI 482 (621)
T PLN03191 419 QSRLCFVCSHLTSGHKDGAEQRRNADVYEIIRRTRFSSVLDTDQPQTIPSHDQIFWFGDLNYRL 482 (621)
T ss_pred CcEEEEEEeccccccccchHHHHHHHHHHHHhccccCcccccCCCccccccceEEEecCccccc
Confidence 568999999999842 23455566666554320 11246899999999654
No 30
>KOG0565 consensus Inositol polyphosphate 5-phosphatase and related proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=53.47 E-value=40 Score=26.25 Aligned_cols=51 Identities=18% Similarity=0.174 Sum_probs=30.2
Q ss_pred CcEEEEEeccCCCccHH--H-HHHHHHHHHHHHHhc---CC---------CCCEEEEecCCCCCCc
Q 021437 134 GFSFQIVNTNMDEFTAR--A-RRRSALLTWQHIASL---PP---------SLPVIYCGGFNTQKES 184 (312)
Q Consensus 134 g~~~~v~~~Hl~~~~~~--~-r~~~~~~l~~~l~~~---~~---------~~pvIv~GDfN~~~~~ 184 (312)
+..+.++++|+.+.... . |....+.+.+.+.-. .. +.-+|..||+|.....
T Consensus 58 ~~~~~~v~~hl~~~~~~~~~~r~~d~~~i~~~~~~~~~~~~~~~~~~~~~~D~v~w~GDlN~Rl~~ 123 (145)
T KOG0565|consen 58 QTSFCFVISHLTSGVHKVYERRNEDYQEILNGLRFPSVSPASEPVISDGEHDTVIWLGDLNYRLSG 123 (145)
T ss_pred CceEEEEEecccccchhhHHHhhccHHHHHhhccccccCcccccccccccccEEEEecceeeeecC
Confidence 45899999999884322 2 334444444433211 11 1358899999975543
No 31
>KOG0808 consensus Carbon-nitrogen hydrolase [Amino acid transport and metabolism]
Probab=42.38 E-value=25 Score=30.33 Aligned_cols=24 Identities=21% Similarity=0.243 Sum_probs=17.4
Q ss_pred HHHHHHHHHhhcCCcEEEEcCCCc
Q 021437 27 RRDLCISVITSYSPMILCTQQGVK 50 (312)
Q Consensus 27 r~~~i~~~i~~~~pDIi~LQEv~~ 50 (312)
|...|.+.-......||||||.+.
T Consensus 101 r~kaiieaaa~agvniiclqeawt 124 (387)
T KOG0808|consen 101 RLKAIIEAAAVAGVNIICLQEAWT 124 (387)
T ss_pred HHHHHHHHHHhcCccEEEeehhhc
Confidence 345555665667899999999753
No 32
>COG5239 CCR4 mRNA deadenylase, exonuclease subunit and related nucleases [RNA processing and modification]
Probab=35.13 E-value=20 Score=32.58 Aligned_cols=50 Identities=16% Similarity=0.214 Sum_probs=36.0
Q ss_pred EEEEEeccCCC--ccHHHHHHHHHHHHHHHHhcCC-CCCEEEEecCCCCCCch
Q 021437 136 SFQIVNTNMDE--FTARARRRSALLTWQHIASLPP-SLPVIYCGGFNTQKEST 185 (312)
Q Consensus 136 ~~~v~~~Hl~~--~~~~~r~~~~~~l~~~l~~~~~-~~pvIv~GDfN~~~~~~ 185 (312)
.+.+.++|+-+ .....|.++...+++.+.+... .-+.+++||||..+.+.
T Consensus 139 ~li~~~~~~f~~p~~~~er~r~t~~~lnri~e~~~~~w~~l~~~l~n~e~gd~ 191 (378)
T COG5239 139 GLILAVTHLFWHPYGYYERFRQTYILLNRIGEKDNIAWVCLFVGLFNKEPGDT 191 (378)
T ss_pred hhhhhhhHhhcccceeehhhhHHHHHHHHHhhhhhcchhheeeeeccCCCCCc
Confidence 46677778744 4566788888888888876532 24668999999887653
No 33
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=27.81 E-value=1.4e+02 Score=25.68 Aligned_cols=47 Identities=11% Similarity=0.069 Sum_probs=28.3
Q ss_pred CcEEEEEeccCCCccHH----------HHHHHHHHHHHHHHhcCCCCCEEEEecCCCC
Q 021437 134 GFSFQIVNTNMDEFTAR----------ARRRSALLTWQHIASLPPSLPVIYCGGFNTQ 181 (312)
Q Consensus 134 g~~~~v~~~Hl~~~~~~----------~r~~~~~~l~~~l~~~~~~~pvIv~GDfN~~ 181 (312)
++.+.+.-.|+...... .+.+-.+.+.+.+.... ...+|+.||+=..
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~-p~~lIilGD~KH~ 76 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYG-PKRLIILGDLKHE 76 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcC-CCEEEEcCccccc
Confidence 67899999999864333 22222222223344433 3689999999753
No 34
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=27.79 E-value=1.5e+02 Score=22.60 Aligned_cols=50 Identities=8% Similarity=-0.036 Sum_probs=25.8
Q ss_pred EEEeccCCCccHHHHHHH---HHHHHHHHHhcCCCCCEEEEecCCCCCCchhHH
Q 021437 138 QIVNTNMDEFTARARRRS---ALLTWQHIASLPPSLPVIYCGGFNTQKESTTGR 188 (312)
Q Consensus 138 ~v~~~Hl~~~~~~~r~~~---~~~l~~~l~~~~~~~pvIv~GDfN~~~~~~~~~ 188 (312)
.+--+|+........... ...+.+.+.+.. -.-+|++||+=.......|.
T Consensus 3 ~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~-~d~vi~~GDl~~~~~~~~~~ 55 (144)
T cd07400 3 HLSDLHFGPERKPELLALLSLLDRLLAEIKALD-PDLVVITGDLTQRGLPEEFE 55 (144)
T ss_pred EeCccCCCCCcchhHHHHHHHHHHHHHHHhccC-CCEEEECCCCCCCCCHHHHH
Confidence 445567765433222211 223344444432 35799999997765543443
No 35
>PRK12404 stage V sporulation protein AD; Provisional
Probab=25.47 E-value=3.3e+02 Score=24.72 Aligned_cols=46 Identities=9% Similarity=0.039 Sum_probs=30.1
Q ss_pred ccHHHHHHHHHHHHHHHHhcC---CCCCEEEEecCCCCCCchhHHhhhc
Q 021437 147 FTARARRRSALLTWQHIASLP---PSLPVIYCGGFNTQKESTTGRFLLG 192 (312)
Q Consensus 147 ~~~~~r~~~~~~l~~~l~~~~---~~~pvIv~GDfN~~~~~~~~~~l~~ 192 (312)
++..---.++..|.+++++.. .+..+|++|||-.--..-..+.|..
T Consensus 200 MGaaMAPAA~dti~~h~~d~~~~~~~yDlI~TGDLg~vG~~i~~~ll~~ 248 (334)
T PRK12404 200 MGGAMAPAAVDTIEAHLRDRQIDASYYDLIVTGDLGHVGREIAKDLLHK 248 (334)
T ss_pred chhhhhHHHHHHHHHHHHHhCCChhhccEEEEcchHHHHHHHHHHHHHH
Confidence 333333456778888888763 3678999999986544444555544
No 36
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=24.90 E-value=1e+02 Score=26.54 Aligned_cols=43 Identities=16% Similarity=0.320 Sum_probs=24.6
Q ss_pred EEEeccCCCccHHHHHHHHHHHHHHHHhcCCCCCEEEEecCCCC
Q 021437 138 QIVNTNMDEFTARARRRSALLTWQHIASLPPSLPVIYCGGFNTQ 181 (312)
Q Consensus 138 ~v~~~Hl~~~~~~~r~~~~~~l~~~l~~~~~~~pvIv~GDfN~~ 181 (312)
.+-.+|+.......+....+.+.+.+++..+ .-+|++||+=+.
T Consensus 4 ~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~p-d~i~~~GD~~d~ 46 (256)
T cd07401 4 HISDIHVSSFHPPNRAQDETFCSNFIDVIKP-ALVLATGDLTDN 46 (256)
T ss_pred EecccccCCcCchhhhhHHHHHHHHHHhhCC-CEEEEccccccc
Confidence 4455677654333222222445666666543 478999998754
No 37
>PRK08304 stage V sporulation protein AD; Validated
Probab=23.12 E-value=3.5e+02 Score=24.64 Aligned_cols=46 Identities=15% Similarity=0.091 Sum_probs=30.0
Q ss_pred ccHHHHHHHHHHHHHHHHhcC---CCCCEEEEecCCCCCCchhHHhhhc
Q 021437 147 FTARARRRSALLTWQHIASLP---PSLPVIYCGGFNTQKESTTGRFLLG 192 (312)
Q Consensus 147 ~~~~~r~~~~~~l~~~l~~~~---~~~pvIv~GDfN~~~~~~~~~~l~~ 192 (312)
.+..---.++..|.++++... .+..+|++|||-.--..-..+.|..
T Consensus 202 mgaaMapAa~dti~~h~~d~~~~~~~yDli~tGDlg~vG~~i~~~ll~~ 250 (337)
T PRK08304 202 MGAAMAPAAADTIQQHFKDTGRSPEDYDLIVTGDLGRVGREILKELLKE 250 (337)
T ss_pred chhhhhHHHHHHHHHHHHHcCCChhhccEEEEcchHHHHHHHHHHHHHH
Confidence 333333456778888888763 3678999999986544444445544
No 38
>PLN02798 nitrilase
Probab=21.73 E-value=1.5e+02 Score=25.97 Aligned_cols=42 Identities=5% Similarity=0.078 Sum_probs=24.2
Q ss_pred CCccEEEEEeecCCCCCCCCCCcHHHHHHHHH---HHHhhcCCcEEEEcCC
Q 021437 1 MSVALSLMTFNLHEDQQEDSPNSWVKRRDLCI---SVITSYSPMILCTQQG 48 (312)
Q Consensus 1 ~~~~l~v~T~Nv~~~~~~~~~~~w~~r~~~i~---~~i~~~~pDIi~LQEv 48 (312)
|+.++||+.-.+.. . + ..+.-.+.+. +...+.++|||+|.|+
T Consensus 7 ~~~~~ria~~Q~~~--~--~--d~~~N~~~~~~~i~~A~~~gadlvvfPE~ 51 (286)
T PLN02798 7 AGSSVRVAVAQMTS--T--N--DLAANFATCSRLAKEAAAAGAKLLFLPEC 51 (286)
T ss_pred ccCccEEEEEEccC--C--C--CHHHHHHHHHHHHHHHHHCCCCEEEcCCC
Confidence 45667766665432 1 1 1222233443 4444578999999997
No 39
>PRK10438 C-N hydrolase family amidase; Provisional
Probab=21.01 E-value=1.7e+02 Score=25.18 Aligned_cols=22 Identities=0% Similarity=-0.153 Sum_probs=15.6
Q ss_pred HHHHHHHHhh-cCCcEEEEcCCC
Q 021437 28 RDLCISVITS-YSPMILCTQQGV 49 (312)
Q Consensus 28 ~~~i~~~i~~-~~pDIi~LQEv~ 49 (312)
.+.+.+++.+ ..+|+|+|-|+.
T Consensus 22 l~~~~~~i~~a~gadLivfPE~~ 44 (256)
T PRK10438 22 LRHFDRQLEGITGRDVIVLPEMF 44 (256)
T ss_pred HHHHHHHHHhccCCCEEEeCCcc
Confidence 4455555543 579999999975
No 40
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=20.97 E-value=1.8e+02 Score=26.15 Aligned_cols=45 Identities=16% Similarity=0.065 Sum_probs=27.2
Q ss_pred cHHHHHHHHHHHHHHHHhcC---CCCCEEEEecCCCCCCchhHHhhhc
Q 021437 148 TARARRRSALLTWQHIASLP---PSLPVIYCGGFNTQKESTTGRFLLG 192 (312)
Q Consensus 148 ~~~~r~~~~~~l~~~l~~~~---~~~pvIv~GDfN~~~~~~~~~~l~~ 192 (312)
+..---.++..|.++++... .+...|++|||-..-..-..+.+..
T Consensus 198 GaAMAPAA~dTI~~h~~D~g~~p~dYDlIvTGDLg~vG~~il~~Ll~~ 245 (329)
T PF07451_consen 198 GAAMAPAAADTIEQHFKDTGRSPDDYDLIVTGDLGKVGRKILRDLLKE 245 (329)
T ss_dssp HHHHHHHHHHHHHHHHHHCT--GGG-SEEEESS-HHHHHHHHHHHHHH
T ss_pred hhhHhHHHHHHHHHHHHHhCCChhhcCeEEecchHHHHHHHHHHHHHH
Confidence 33334556778889998763 3678999999985433333444443
Done!