BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021440
(312 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5REY7|UBXN7_PONAB UBX domain-containing protein 7 OS=Pongo abelii GN=UBXN7 PE=2 SV=2
Length = 489
Score = 124 bits (312), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 82/145 (56%), Gaps = 4/145 (2%)
Query: 69 RPDQNLVTGGQDGGYEVCVPPHAKDLFYNDASTTDTSHDILASLYRPPFHVMFNGSFEKA 128
RP +++ G +D E ++ + D LA L+RPP +M GSFE A
Sbjct: 102 RPARSIFDGFRDFQTETI----RQEQELRNGGAIDKKLTTLADLFRPPIDLMHKGSFETA 157
Query: 129 KDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVC 188
K+ Q+KWL++N+Q+ ++F+ LNRD W NEAV II +FIFWQ Y D+ EG +
Sbjct: 158 KECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYI 217
Query: 189 SFYNMDSIPAVLVIDPITGQKICSW 213
FY + P V ++DP TGQK+ W
Sbjct: 218 QFYKLGDFPYVSILDPRTGQKLVEW 242
>sp|O94888|UBXN7_HUMAN UBX domain-containing protein 7 OS=Homo sapiens GN=UBXN7 PE=1 SV=2
Length = 489
Score = 124 bits (312), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 82/145 (56%), Gaps = 4/145 (2%)
Query: 69 RPDQNLVTGGQDGGYEVCVPPHAKDLFYNDASTTDTSHDILASLYRPPFHVMFNGSFEKA 128
RP +++ G +D E ++ + D LA L+RPP +M GSFE A
Sbjct: 102 RPARSIFDGFRDFQTETI----RQEQELRNGGAIDKKLTTLADLFRPPIDLMHKGSFETA 157
Query: 129 KDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVC 188
K+ Q+KWL++N+Q+ ++F+ LNRD W NEAV II +FIFWQ Y D+ EG +
Sbjct: 158 KECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYI 217
Query: 189 SFYNMDSIPAVLVIDPITGQKICSW 213
FY + P V ++DP TGQK+ W
Sbjct: 218 QFYKLGDFPYVSILDPRTGQKLVEW 242
>sp|Q6P5G6|UBXN7_MOUSE UBX domain-containing protein 7 OS=Mus musculus GN=Ubxn7 PE=1 SV=2
Length = 467
Score = 124 bits (312), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 71/117 (60%)
Query: 97 NDASTTDTSHDILASLYRPPFHVMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNR 156
+ D LA L+RPP +M GSFE AK+ Q+KWL++N+Q+ ++F+ LNR
Sbjct: 104 RNGGAIDKKLTTLADLFRPPIDLMHKGSFETAKECGQMQNKWLMINIQNVQDFACQCLNR 163
Query: 157 DTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSW 213
D W NEAV II +FIFWQ Y D+ EG + FY + P V ++DP TGQK+ W
Sbjct: 164 DVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRTGQKLVEW 220
>sp|O14048|UBX2_SCHPO UBX domain-containing protein 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubx2 PE=1 SV=1
Length = 427
Score = 101 bits (252), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 69/111 (62%)
Query: 109 LASLYRPPFHVMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQII 168
LA L+RPP+ ++ N S ++A+ A +Q +W+LVNLQ++ F +LNRD W +E+V ++I
Sbjct: 145 LAKLFRPPYDIISNLSLDEARIEASSQKRWILVNLQTSTSFECQVLNRDLWKDESVKEVI 204
Query: 169 SVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINP 219
+F+F Q DD G + FY + S P + ++DP TG+++ W P
Sbjct: 205 RAHFLFLQLLDDEEPGMEFKRFYPVRSTPHIAILDPRTGERVKEWSKSFTP 255
>sp|Q55BU7|UBXN7_DICDI UBX domain-containing protein 7 homolog OS=Dictyostelium discoideum
GN=ubxd7 PE=4 SV=1
Length = 503
Score = 94.7 bits (234), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 70/122 (57%)
Query: 109 LASLYRPPFHVMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQII 168
L+ L++PP ++ G+F++ K A + ++LVN+Q +EF LNRDTW N+ + ++I
Sbjct: 134 LSELFKPPLDILTFGTFDEIKKMAEQKKYFVLVNIQDVQEFDCQKLNRDTWSNKDLKELI 193
Query: 169 SVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLP 228
NF+FWQ EG Y + P + +IDP TGQK+ G I+ + + + L+
Sbjct: 194 GENFVFWQVNSANPEGKWFTQIYPVFKFPYIAIIDPRTGQKLQDMTGFIDAEEMAQYLVT 253
Query: 229 FM 230
F+
Sbjct: 254 FL 255
>sp|Q06682|UBX5_YEAST UBX domain-containing protein 5 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=UBX5 PE=1 SV=1
Length = 500
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 6/122 (4%)
Query: 109 LASLYRPPFHVMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQII 168
LA L+RPPF +M + AK A A+ KW+++N+Q + F LNRD W + V II
Sbjct: 208 LALLFRPPFSIMSKLDLDAAKQKARAKQKWIMINIQDSGIFQCQALNRDLWSSRPVKTII 267
Query: 169 SVNFIFWQEYDDTSEGWKVCSFY---NMDSIPAVLVIDPITGQKICSWCGMINPQPLGEM 225
NF+F Q ++ FY N D +P + ++DPITG+++ W ++ P+ E
Sbjct: 268 KENFVFLQYQYESRNAQPYLQFYHLNNKDDLPHIAILDPITGERVKQWNRVV---PIPEQ 324
Query: 226 LL 227
+
Sbjct: 325 FI 326
>sp|Q96CS3|FAF2_HUMAN FAS-associated factor 2 OS=Homo sapiens GN=FAF2 PE=1 SV=2
Length = 445
Score = 39.3 bits (90), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 61/142 (42%), Gaps = 2/142 (1%)
Query: 119 VMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEY 178
V + G++ +A + A + ++LLV L S R+T V +I+ +FW
Sbjct: 153 VFYQGTYSQALNDAKRELRFLLVYLHGDDHQDSDEFCRNTLCAPEVISLINTRMLFWACS 212
Query: 179 DDTSEGWKVCSFYNMDSIP--AVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRSPRK 236
+ EG++V ++ P A++++ + G+I P L L MD +
Sbjct: 213 TNKPEGYRVSQALRENTYPFLAMIMLKDRRMTVVGRLEGLIQPDDLINQLTFIMDANQTY 272
Query: 237 CATIIIERQRASSTTPQRNIKD 258
+ +ER+ + T R +D
Sbjct: 273 LVSERLEREERNQTQVLRQQQD 294
>sp|Q6GQ69|FAF2B_XENLA FAS-associated factor 2-B OS=Xenopus laevis GN=faf2-b PE=2 SV=1
Length = 445
Score = 39.3 bits (90), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 62/142 (43%), Gaps = 2/142 (1%)
Query: 119 VMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEY 178
V + G++ +A + A + ++LLV L S R+T V+ I+ +FW
Sbjct: 153 VFYQGTYSQALNDAKQELRFLLVYLHGEDHQDSDDFCRNTLCTSEVTHFINSRMLFWACS 212
Query: 179 DDTSEGWKVCSFYNMDSIP--AVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRSPRK 236
+ EG++V + + P A++++ + G+I PQ L L ++ +
Sbjct: 213 SNKPEGFRVSQALHESTYPFLAMIMLKDRRMTVVGRLEGLIQPQDLINQLTFIIEANQTY 272
Query: 237 CATIIIERQRASSTTPQRNIKD 258
+ +ER+ + T R +D
Sbjct: 273 LVSERLEREERNQTQVLRQQQD 294
>sp|Q2HJD0|FAF2_BOVIN FAS-associated factor 2 OS=Bos taurus GN=FAF2 PE=2 SV=1
Length = 445
Score = 37.7 bits (86), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 61/142 (42%), Gaps = 2/142 (1%)
Query: 119 VMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEY 178
V + G++ +A + A + ++LLV L S R+T V +I+ +FW
Sbjct: 153 VFYLGTYSQALNDAKRELRFLLVYLHGDDHQDSDEFCRNTLCAPEVISLINTRMLFWACS 212
Query: 179 DDTSEGWKVCSFYNMDSIP--AVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRSPRK 236
+ EG++V ++ P A++++ + G+I P L L MD +
Sbjct: 213 TNKPEGYRVSQALRENTYPFLAMIMLKDRRMTVVGRLEGLIQPDDLINQLTFIMDANQTY 272
Query: 237 CATIIIERQRASSTTPQRNIKD 258
+ +ER+ + T R +D
Sbjct: 273 LVSERLEREERNQTQVLRQQQD 294
>sp|Q3TDN2|FAF2_MOUSE FAS-associated factor 2 OS=Mus musculus GN=Faf2 PE=2 SV=2
Length = 445
Score = 36.6 bits (83), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 60/142 (42%), Gaps = 2/142 (1%)
Query: 119 VMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEY 178
V + G++ +A + A + ++LLV L S R+ V +I+ +FW
Sbjct: 153 VFYQGTYSQALNDAKRELRFLLVYLHGDDHQDSDEFCRNALCAPEVISLINSRMLFWACS 212
Query: 179 DDTSEGWKVCSFYNMDSIP--AVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRSPRK 236
+ EG++V ++ P A++++ + G+I P L L MD +
Sbjct: 213 TNKPEGYRVSQALRENTYPFLAMIMLKDRRMTVVGRLEGLIQPDDLINQLTFIMDANQTY 272
Query: 237 CATIIIERQRASSTTPQRNIKD 258
+ +ER+ + T R +D
Sbjct: 273 LVSERLEREERNQTQVLRQQQD 294
>sp|Q28BP9|FAF2_XENTR FAS-associated factor 2 OS=Xenopus tropicalis GN=faf2 PE=2 SV=1
Length = 445
Score = 35.8 bits (81), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 62/142 (43%), Gaps = 2/142 (1%)
Query: 119 VMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEY 178
V + G++ +A + A + ++LLV L S R+T V+ ++ +FW
Sbjct: 153 VFYQGTYSQALNDAKQELRFLLVYLHGEDHQDSDDFCRNTLCIPEVTNFLNSRMLFWACS 212
Query: 179 DDTSEGWKVCSFYNMDSIP--AVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRSPRK 236
+ EG++V ++ P A++++ + G+I PQ L L ++ +
Sbjct: 213 TNKPEGFRVSQALRENTYPFLAMIMLKDRRMTVVGRLEGLIQPQDLINQLTFIVEANQTY 272
Query: 237 CATIIIERQRASSTTPQRNIKD 258
+ +ER+ + T R +D
Sbjct: 273 LVSERLEREERNQTQVLRQQQD 294
>sp|Q42510|GNOM_ARATH ARF guanine-nucleotide exchange factor GNOM OS=Arabidopsis thaliana
GN=GN PE=1 SV=1
Length = 1451
Score = 35.4 bits (80), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 18/119 (15%)
Query: 186 KVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRSPRKCATIII--- 242
K+ + ++++ + LV+ +C + ++NP + E +L F D + + ATI I
Sbjct: 826 KISACHHLEDVLDDLVV------SLCKFTTLLNPSSVDEPVLAFGDDAKARMATITIFTI 879
Query: 243 -ERQRASSTTPQRNIKDCCSALAASMETIKDTIGVSPSDADVTSADKEATSTTQGTAYP 300
+ T RNI DC L +G+ P+ +AD+ S+ QG P
Sbjct: 880 ANKYGDYIRTGWRNILDCILRL--------HKLGLLPARVASDAADESEHSSEQGQGKP 930
>sp|Q5BK32|FAF2_RAT FAS-associated factor 2 OS=Rattus norvegicus GN=Faf2 PE=2 SV=1
Length = 346
Score = 35.4 bits (80), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 59/142 (41%), Gaps = 2/142 (1%)
Query: 119 VMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEY 178
V + G++ +A A + ++LLV L S R+ V +I+ +FW
Sbjct: 54 VFYQGTYSQALSDAKRELRFLLVYLHGDDHQDSDEFCRNALCAPEVISLINSRMLFWACS 113
Query: 179 DDTSEGWKVCSFYNMDSIP--AVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRSPRK 236
+ EG++V ++ P A++++ + G+I P L L MD +
Sbjct: 114 TNKPEGYRVSQALRENTYPFLAMIMLKDRRMTVVGRLEGLIQPDDLINQLTFIMDANQTY 173
Query: 237 CATIIIERQRASSTTPQRNIKD 258
+ +ER+ + T R +D
Sbjct: 174 LVSERLEREERNQTQVLRQQQD 195
>sp|Q6AZH6|FAF2A_XENLA FAS-associated factor 2-A OS=Xenopus laevis GN=faf2-a PE=2 SV=1
Length = 445
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Query: 119 VMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEY 178
V + G++ +A + A + ++LLV L S R+T V+ I+ +FW
Sbjct: 153 VFYQGTYSQALNDAKQELRFLLVYLHGEDHQDSDDFCRNTLCTPEVTHFINSRMLFWACS 212
Query: 179 DDTSEGWKVCSFYNMDSIP--AVLVIDPITGQKICSWCGMINPQPL 222
+ EG++V ++ P ++++ + G++ PQ L
Sbjct: 213 TNKPEGFRVSQALRENTYPFLGMIMLKDRRMTVVGRLEGLMQPQDL 258
>sp|Q8I2A6|CBPZ1_PLAF7 Putative zinc carboxypeptidase PFA0170c OS=Plasmodium falciparum
(isolate 3D7) GN=PFA0170c PE=2 SV=1
Length = 1620
Score = 32.7 bits (73), Expect = 3.4, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 9/109 (8%)
Query: 83 YEVCVPPHAKDLFYNDASTTDTSHDILASLYRPPFHVMFNGSFEKAKDAALAQDKWLLVN 142
Y + +P + Y S + + + + LY P H++FN FE + ++
Sbjct: 368 YCLNIPGYKYKYKYICPSMSKMNDEKIKELYIPKGHILFNSKFESGNLKYVIKE------ 421
Query: 143 LQSTKEFSSLMLNRDTWGNEAVSQ--IISVNFIFWQEYDDTSEGWKVCS 189
++ KE SL LN D NE +Q S +++ + Y + K+C+
Sbjct: 422 -ENDKEVYSLFLNPDIRMNEKKNQWFYFSASYVPNEYYTNELYKMKMCN 469
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.129 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113,056,637
Number of Sequences: 539616
Number of extensions: 4478380
Number of successful extensions: 10502
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 10487
Number of HSP's gapped (non-prelim): 18
length of query: 312
length of database: 191,569,459
effective HSP length: 117
effective length of query: 195
effective length of database: 128,434,387
effective search space: 25044705465
effective search space used: 25044705465
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)