Query 021440
Match_columns 312
No_of_seqs 274 out of 554
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 04:10:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021440.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021440hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2dlx_A UBX domain-containing p 100.0 1.7E-33 5.8E-38 242.0 13.9 134 101-235 7-140 (153)
2 2ec4_A FAS-associated factor 1 100.0 1.4E-29 4.7E-34 222.7 13.1 133 102-234 17-171 (178)
3 3f9u_A Putative exported cytoc 99.6 6.5E-15 2.2E-19 125.2 10.4 113 120-233 31-168 (172)
4 2kuc_A Putative disulphide-iso 99.5 1.5E-13 5.1E-18 110.8 12.5 111 121-232 12-122 (130)
5 2lst_A Thioredoxin; structural 99.2 2.6E-15 8.9E-20 121.4 0.0 115 121-236 5-121 (130)
6 2ju5_A Thioredoxin disulfide i 99.5 4.2E-13 1.4E-17 112.9 12.5 107 123-231 34-152 (154)
7 3ph9_A Anterior gradient prote 99.5 1E-13 3.6E-18 118.2 7.9 112 119-234 27-148 (151)
8 3ira_A Conserved protein; meth 99.4 6.4E-13 2.2E-17 115.9 9.7 110 121-233 24-146 (173)
9 2dam_A ETEA protein; KIAA0887, 99.3 2.1E-12 7.2E-17 96.1 6.5 51 1-51 11-61 (67)
10 3fk8_A Disulphide isomerase; A 99.3 7E-12 2.4E-16 101.6 10.1 105 123-229 16-131 (133)
11 1v92_A NSFL1 cofactor P47; 3-h 99.3 1.5E-12 5.2E-17 89.4 5.2 43 6-49 3-45 (46)
12 2fwh_A Thiol:disulfide interch 99.3 9.2E-12 3.1E-16 101.9 10.1 110 115-228 11-125 (134)
13 2dal_A Protein KIAA0794; FAS a 99.3 5.5E-12 1.9E-16 92.4 6.3 46 4-50 11-56 (62)
14 3e21_A HFAF1, FAS-associated f 99.2 3E-12 1E-16 87.9 3.1 42 6-47 3-44 (45)
15 2dzl_A Protein FAM100B; UBA-li 99.2 2.4E-11 8.1E-16 90.1 5.6 49 1-50 8-58 (66)
16 1ep7_A Thioredoxin CH1, H-type 99.0 1.6E-09 5.3E-14 84.4 10.5 102 122-231 10-111 (112)
17 2l57_A Uncharacterized protein 99.0 8.2E-10 2.8E-14 88.5 8.8 99 132-234 22-120 (126)
18 1xfl_A Thioredoxin H1; AT3G510 99.0 3.8E-09 1.3E-13 85.2 10.7 100 120-230 22-123 (124)
19 2dml_A Protein disulfide-isome 99.0 3.8E-09 1.3E-13 84.6 10.6 104 122-234 24-127 (130)
20 3qfa_C Thioredoxin; protein-pr 99.0 2.7E-09 9.1E-14 84.9 9.4 100 118-230 15-116 (116)
21 2vm1_A Thioredoxin, thioredoxi 99.0 4.5E-09 1.5E-13 82.3 10.4 104 118-232 10-115 (118)
22 2vlu_A Thioredoxin, thioredoxi 98.9 5.1E-09 1.7E-13 83.0 10.7 107 116-231 14-120 (122)
23 3zzx_A Thioredoxin; oxidoreduc 98.9 3.6E-09 1.2E-13 84.0 9.6 95 122-227 8-102 (105)
24 3tco_A Thioredoxin (TRXA-1); d 98.9 3.3E-09 1.1E-13 81.6 8.8 99 121-230 10-108 (109)
25 3gnj_A Thioredoxin domain prot 98.9 9.7E-09 3.3E-13 79.5 10.9 91 134-231 20-110 (111)
26 3d22_A TRXH4, thioredoxin H-ty 98.9 6.2E-09 2.1E-13 84.6 10.2 103 120-233 30-134 (139)
27 3dml_A Putative uncharacterize 98.9 1.4E-09 5E-14 88.9 5.8 97 135-234 17-113 (116)
28 2voc_A Thioredoxin; electron t 98.9 9.1E-09 3.1E-13 80.9 10.3 99 121-231 7-105 (112)
29 1ti3_A Thioredoxin H, PTTRXH1; 98.9 6.4E-09 2.2E-13 80.8 9.2 100 121-231 11-112 (113)
30 1x5d_A Protein disulfide-isome 98.9 8.9E-09 3E-13 82.5 10.1 101 123-233 15-119 (133)
31 1thx_A Thioredoxin, thioredoxi 98.9 9.3E-09 3.2E-13 80.0 9.9 101 122-232 14-114 (115)
32 3p2a_A Thioredoxin 2, putative 98.9 1.4E-08 4.8E-13 83.7 11.1 103 121-234 44-146 (148)
33 3die_A Thioredoxin, TRX; elect 98.9 9.6E-09 3.3E-13 78.7 9.2 97 121-229 9-105 (106)
34 1dby_A Chloroplast thioredoxin 98.9 1.2E-08 4E-13 78.7 9.7 95 129-230 12-106 (107)
35 1w4v_A Thioredoxin, mitochondr 98.9 1.3E-08 4.4E-13 81.0 10.0 92 132-230 27-118 (119)
36 2yzu_A Thioredoxin; redox prot 98.8 1.3E-08 4.3E-13 78.1 9.2 97 123-230 9-105 (109)
37 1nsw_A Thioredoxin, TRX; therm 98.8 4.6E-09 1.6E-13 80.8 6.7 92 131-229 12-103 (105)
38 2i4a_A Thioredoxin; acidophIle 98.8 1.5E-08 5E-13 77.8 9.4 97 122-228 9-105 (107)
39 1sen_A Thioredoxin-like protei 98.8 4.7E-09 1.6E-13 89.2 7.1 118 108-235 21-152 (164)
40 2e0q_A Thioredoxin; electron t 98.8 2.4E-08 8.3E-13 75.7 10.5 98 122-231 6-103 (104)
41 2trx_A Thioredoxin; electron t 98.8 2.1E-08 7E-13 77.4 10.1 98 123-230 10-107 (108)
42 3d6i_A Monothiol glutaredoxin- 98.8 2E-08 6.8E-13 78.3 9.8 97 123-231 9-109 (112)
43 1t00_A Thioredoxin, TRX; redox 98.8 1.2E-08 4E-13 79.5 8.3 92 133-231 20-111 (112)
44 3hz4_A Thioredoxin; NYSGXRC, P 98.8 1.6E-08 5.4E-13 83.0 9.4 103 124-233 12-114 (140)
45 3hxs_A Thioredoxin, TRXP; elec 98.8 1.6E-08 5.5E-13 82.2 9.3 90 135-231 50-139 (141)
46 3m9j_A Thioredoxin; oxidoreduc 98.8 1.9E-08 6.3E-13 77.1 9.0 96 123-229 9-104 (105)
47 3ul3_B Thioredoxin, thioredoxi 98.8 9.1E-09 3.1E-13 82.9 7.5 92 129-227 35-126 (128)
48 3f3q_A Thioredoxin-1; His TAG, 98.8 2.4E-08 8.2E-13 78.3 9.8 89 130-229 18-108 (109)
49 2l5l_A Thioredoxin; structural 98.8 1.2E-08 4.1E-13 83.2 8.3 95 135-236 37-131 (136)
50 2b5x_A YKUV protein, TRXY; thi 98.8 1.1E-08 3.7E-13 82.6 8.0 98 131-232 24-146 (148)
51 1fb6_A Thioredoxin M; electron 98.8 1.5E-08 5.2E-13 77.5 8.0 98 123-230 8-105 (105)
52 2o8v_B Thioredoxin 1; disulfid 98.8 1.7E-08 5.8E-13 82.0 8.7 99 122-230 29-127 (128)
53 2dj1_A Protein disulfide-isome 98.8 4.1E-08 1.4E-12 79.5 10.8 100 122-233 24-126 (140)
54 1r26_A Thioredoxin; redox-acti 98.8 3.2E-08 1.1E-12 80.2 10.0 97 123-232 28-124 (125)
55 1xwb_A Thioredoxin; dimerizati 98.8 4.1E-08 1.4E-12 75.2 10.1 96 123-228 9-104 (106)
56 2f51_A Thioredoxin; electron t 98.8 5.1E-08 1.7E-12 77.8 10.4 102 121-229 8-111 (118)
57 4euy_A Uncharacterized protein 98.8 1.9E-08 6.6E-13 78.0 7.7 87 134-230 16-104 (105)
58 3uvt_A Thioredoxin domain-cont 98.7 8.4E-08 2.9E-12 74.0 11.0 93 121-228 11-109 (111)
59 1syr_A Thioredoxin; SGPP, stru 98.7 3.1E-08 1.1E-12 77.6 8.7 96 121-229 15-110 (112)
60 2i1u_A Thioredoxin, TRX, MPT46 98.7 1E-08 3.6E-13 80.7 5.8 91 131-228 25-115 (121)
61 2ppt_A Thioredoxin-2; thiredox 98.7 4.6E-08 1.6E-12 82.3 9.8 91 134-231 62-152 (155)
62 1gh2_A Thioredoxin-like protei 98.7 8.3E-08 2.8E-12 74.3 10.5 99 121-230 8-106 (107)
63 1wmj_A Thioredoxin H-type; str 98.7 6.1E-09 2.1E-13 83.1 4.0 104 118-232 18-123 (130)
64 3aps_A DNAJ homolog subfamily 98.7 2.8E-08 9.7E-13 78.6 7.8 102 126-234 11-116 (122)
65 2xc2_A Thioredoxinn; oxidoredu 98.7 7.4E-08 2.5E-12 75.9 9.8 94 123-229 22-116 (117)
66 3apq_A DNAJ homolog subfamily 98.7 8.4E-08 2.9E-12 84.0 11.0 111 112-233 92-204 (210)
67 1v98_A Thioredoxin; oxidoreduc 98.7 6.5E-08 2.2E-12 78.9 9.5 100 122-232 40-139 (140)
68 2oe3_A Thioredoxin-3; electron 98.7 8E-08 2.7E-12 76.3 9.8 91 126-227 20-112 (114)
69 3qou_A Protein YBBN; thioredox 98.7 7.5E-08 2.6E-12 87.7 10.5 102 120-230 12-113 (287)
70 2f9s_A Thiol-disulfide oxidore 98.7 7.2E-08 2.5E-12 78.9 9.3 96 134-233 24-140 (151)
71 2j23_A Thioredoxin; immune pro 98.7 9.7E-08 3.3E-12 76.2 9.6 96 123-230 24-120 (121)
72 2wz9_A Glutaredoxin-3; protein 98.7 1.3E-07 4.5E-12 78.7 10.8 99 122-233 20-120 (153)
73 2lja_A Putative thiol-disulfid 98.7 1.2E-07 4.1E-12 77.4 10.2 98 135-236 29-148 (152)
74 3raz_A Thioredoxin-related pro 98.7 6.6E-08 2.3E-12 79.4 8.6 98 132-236 20-145 (151)
75 1zzo_A RV1677; thioredoxin fol 98.7 7.9E-08 2.7E-12 76.2 8.7 90 134-231 23-135 (136)
76 3dxb_A Thioredoxin N-terminall 98.7 6.4E-08 2.2E-12 85.8 8.7 104 122-235 19-122 (222)
77 3gix_A Thioredoxin-like protei 98.6 8.1E-08 2.8E-12 80.3 8.7 100 124-232 13-122 (149)
78 2vim_A Thioredoxin, TRX; thior 98.6 2.5E-07 8.6E-12 70.4 10.6 94 123-229 8-103 (104)
79 3erw_A Sporulation thiol-disul 98.6 7.3E-08 2.5E-12 77.4 7.7 88 135-226 33-144 (145)
80 4evm_A Thioredoxin family prot 98.6 1.4E-07 4.9E-12 74.3 9.1 91 134-228 20-136 (138)
81 2l6c_A Thioredoxin; oxidoreduc 98.6 1.1E-07 3.8E-12 74.6 8.2 96 121-231 9-106 (110)
82 1lu4_A Soluble secreted antige 98.6 1.2E-07 4.1E-12 75.5 8.4 90 133-230 21-135 (136)
83 3kh7_A Thiol:disulfide interch 98.6 1.3E-07 4.5E-12 80.5 8.9 95 132-233 54-169 (176)
84 3cxg_A Putative thioredoxin; m 98.6 7.7E-08 2.6E-12 78.5 7.1 98 123-231 29-129 (133)
85 2b1k_A Thiol:disulfide interch 98.6 1.2E-07 4.1E-12 79.1 8.3 91 135-232 50-161 (168)
86 3h79_A Thioredoxin-like protei 98.6 3.2E-07 1.1E-11 73.5 10.5 98 121-228 21-125 (127)
87 1zma_A Bacterocin transport ac 98.6 3.7E-07 1.3E-11 72.0 10.7 87 132-226 25-116 (118)
88 3fkf_A Thiol-disulfide oxidore 98.6 2.1E-07 7E-12 75.1 9.3 90 135-231 32-146 (148)
89 3lor_A Thiol-disulfide isomera 98.6 7.4E-08 2.5E-12 79.3 6.7 97 129-232 23-156 (160)
90 1kng_A Thiol:disulfide interch 98.6 1.8E-07 6.2E-12 76.5 8.8 92 134-232 40-153 (156)
91 3hcz_A Possible thiol-disulfid 98.6 1.4E-07 4.9E-12 76.0 8.0 93 135-231 30-146 (148)
92 2av4_A Thioredoxin-like protei 98.6 1.6E-07 5.6E-12 80.8 8.6 100 122-233 29-141 (160)
93 1mek_A Protein disulfide isome 98.6 7E-08 2.4E-12 75.2 5.8 98 121-229 13-115 (120)
94 3emx_A Thioredoxin; structural 98.6 2E-07 6.8E-12 76.0 8.6 101 122-236 23-131 (135)
95 3lwa_A Secreted thiol-disulfid 98.6 4.3E-07 1.5E-11 77.0 10.8 94 135-232 58-182 (183)
96 3or5_A Thiol:disulfide interch 98.5 4.2E-07 1.5E-11 74.9 10.5 98 134-235 32-155 (165)
97 1oaz_A Thioredoxin 1; immune s 98.5 5.5E-08 1.9E-12 78.5 4.8 97 122-228 10-120 (123)
98 1qgv_A Spliceosomal protein U5 98.5 3.8E-07 1.3E-11 75.6 10.1 91 135-232 22-122 (142)
99 2yj7_A LPBCA thioredoxin; oxid 98.0 8.8E-09 3E-13 78.4 0.0 93 130-229 13-105 (106)
100 1faa_A Thioredoxin F; electron 98.5 4.5E-07 1.5E-11 71.9 10.1 97 121-229 24-122 (124)
101 2pu9_C TRX-F, thioredoxin F-ty 98.5 2.8E-07 9.7E-12 71.7 8.4 97 122-230 12-110 (111)
102 2l5o_A Putative thioredoxin; s 98.5 3.9E-07 1.4E-11 74.3 9.4 98 133-234 25-144 (153)
103 2h30_A Thioredoxin, peptide me 98.5 9.5E-08 3.3E-12 78.9 5.2 97 132-231 34-156 (164)
104 3eyt_A Uncharacterized protein 98.5 1.6E-07 5.5E-12 77.2 6.6 94 132-232 24-153 (158)
105 3kcm_A Thioredoxin family prot 98.5 5.8E-07 2E-11 73.4 9.4 98 134-235 26-147 (154)
106 3q6o_A Sulfhydryl oxidase 1; p 98.5 5E-07 1.7E-11 80.7 9.7 118 110-235 5-131 (244)
107 2lrn_A Thiol:disulfide interch 98.5 1.1E-06 3.9E-11 72.0 11.0 93 135-234 28-144 (152)
108 3gl3_A Putative thiol:disulfid 98.5 9E-07 3.1E-11 72.0 10.2 99 132-234 24-145 (152)
109 1x5e_A Thioredoxin domain cont 98.5 6E-07 2.1E-11 71.5 8.7 96 121-230 13-109 (126)
110 2dj0_A Thioredoxin-related tra 98.4 4.8E-07 1.6E-11 73.5 7.8 91 122-221 14-111 (137)
111 1jfu_A Thiol:disulfide interch 98.4 1.5E-06 5.1E-11 73.7 10.9 94 135-232 59-181 (186)
112 2djj_A PDI, protein disulfide- 98.4 2.4E-07 8.3E-12 72.9 5.6 88 134-230 23-116 (121)
113 2dbc_A PDCL2, unnamed protein 98.4 3.4E-07 1.2E-11 74.9 6.6 99 121-233 16-119 (135)
114 3ed3_A Protein disulfide-isome 98.4 6.7E-07 2.3E-11 83.3 9.2 100 123-230 25-141 (298)
115 2ggt_A SCO1 protein homolog, m 98.4 1.8E-06 6.2E-11 71.1 10.7 95 135-233 22-163 (164)
116 3ia1_A THIO-disulfide isomeras 98.4 7.9E-07 2.7E-11 72.7 8.3 90 137-233 31-146 (154)
117 1a8l_A Protein disulfide oxido 98.4 2.6E-06 8.9E-11 74.4 11.5 92 132-230 129-225 (226)
118 3idv_A Protein disulfide-isome 98.4 1.8E-06 6.3E-11 75.7 10.5 101 121-233 21-124 (241)
119 2qgv_A Hydrogenase-1 operon pr 98.4 2.5E-06 8.5E-11 71.9 10.7 99 119-231 21-125 (140)
120 2dj3_A Protein disulfide-isome 98.4 6.7E-07 2.3E-11 71.6 6.9 93 135-233 24-120 (133)
121 2qsi_A Putative hydrogenase ex 98.4 4.8E-06 1.6E-10 69.9 12.1 112 106-232 8-124 (137)
122 3t58_A Sulfhydryl oxidase 1; o 98.4 1.6E-06 5.6E-11 87.1 10.9 119 110-234 5-130 (519)
123 3hdc_A Thioredoxin family prot 98.3 1.1E-06 3.7E-11 72.8 7.9 90 135-228 40-149 (158)
124 3bq3_A Defective in cullin ned 98.3 2.7E-07 9.4E-12 85.6 4.4 46 5-51 12-57 (270)
125 2lrt_A Uncharacterized protein 98.3 2.3E-06 8E-11 70.7 9.5 90 135-227 34-144 (152)
126 3fw2_A Thiol-disulfide oxidore 98.3 3.3E-06 1.1E-10 69.0 10.2 88 135-232 32-149 (150)
127 2rli_A SCO2 protein homolog, m 98.3 5.9E-06 2E-10 68.6 11.3 95 135-233 25-166 (171)
128 3ha9_A Uncharacterized thiored 98.3 3.9E-06 1.3E-10 69.6 10.0 88 134-230 35-163 (165)
129 3ewl_A Uncharacterized conserv 98.3 2.9E-06 9.8E-11 68.4 8.8 90 135-228 26-138 (142)
130 3eur_A Uncharacterized protein 98.3 3.2E-06 1.1E-10 68.5 8.8 80 135-215 30-132 (142)
131 2es7_A Q8ZP25_salty, putative 98.3 3E-06 1E-10 70.7 8.6 100 120-233 22-127 (142)
132 1nho_A Probable thioredoxin; b 98.2 3E-06 1E-10 62.2 7.4 81 139-230 4-84 (85)
133 1i5g_A Tryparedoxin II; electr 98.2 4.6E-06 1.6E-10 67.6 8.5 77 133-212 25-125 (144)
134 1o8x_A Tryparedoxin, TRYX, TXN 98.2 3.6E-06 1.2E-10 68.5 7.8 79 132-213 24-126 (146)
135 2ywi_A Hypothetical conserved 98.2 5.6E-06 1.9E-10 70.5 9.0 100 134-236 43-179 (196)
136 1wou_A Thioredoxin -related pr 98.2 2.7E-06 9.2E-11 68.1 6.5 94 123-231 13-121 (123)
137 1a0r_P Phosducin, MEKA, PP33; 98.2 1E-06 3.4E-11 80.5 4.3 102 122-235 120-226 (245)
138 1fo5_A Thioredoxin; disulfide 98.2 6.1E-06 2.1E-10 60.5 7.6 82 137-229 3-84 (85)
139 1o73_A Tryparedoxin; electron 98.2 6.6E-06 2.3E-10 66.3 8.5 79 132-213 24-126 (144)
140 3drn_A Peroxiredoxin, bacterio 98.1 8.6E-06 2.9E-10 67.8 9.1 95 135-232 27-146 (161)
141 2r2j_A Thioredoxin domain-cont 98.1 1.2E-05 4.1E-10 76.7 11.0 100 122-232 12-118 (382)
142 2b5e_A Protein disulfide-isome 98.1 1E-05 3.5E-10 79.7 10.7 99 121-230 20-121 (504)
143 3s9f_A Tryparedoxin; thioredox 98.1 8.5E-06 2.9E-10 68.6 8.7 78 132-212 44-145 (165)
144 2p5q_A Glutathione peroxidase 98.1 1.3E-05 4.4E-10 66.3 9.6 94 135-231 31-168 (170)
145 2hyx_A Protein DIPZ; thioredox 98.1 7.2E-06 2.5E-10 78.6 9.1 95 135-233 81-201 (352)
146 3idv_A Protein disulfide-isome 98.1 2E-05 6.8E-10 69.0 11.2 98 121-230 136-236 (241)
147 3f8u_A Protein disulfide-isome 98.1 3.7E-06 1.3E-10 82.1 6.8 102 122-231 8-109 (481)
148 2trc_P Phosducin, MEKA, PP33; 98.1 2.6E-06 8.8E-11 76.0 5.1 102 121-234 106-212 (217)
149 2cvb_A Probable thiol-disulfid 98.1 1.2E-05 4.2E-10 68.2 8.6 95 135-236 32-164 (188)
150 2v1m_A Glutathione peroxidase; 98.1 2.5E-05 8.4E-10 64.5 10.2 95 135-232 30-168 (169)
151 3cmi_A Peroxiredoxin HYR1; thi 98.1 1.3E-05 4.4E-10 67.2 8.6 94 135-232 31-169 (171)
152 2vup_A Glutathione peroxidase- 98.1 1.6E-05 5.4E-10 68.2 9.2 94 135-232 47-186 (190)
153 3f8u_A Protein disulfide-isome 98.0 1E-05 3.6E-10 78.9 8.3 102 119-230 356-460 (481)
154 1sji_A Calsequestrin 2, calseq 98.0 2.3E-05 8E-10 73.6 10.0 95 123-229 19-120 (350)
155 1ilo_A Conserved hypothetical 98.0 2.2E-05 7.6E-10 56.7 7.8 73 139-225 2-75 (77)
156 1xvw_A Hypothetical protein RV 98.0 1.3E-05 4.6E-10 65.9 7.2 90 135-231 34-156 (160)
157 3kp8_A Vkorc1/thioredoxin doma 98.0 6.9E-06 2.4E-10 65.0 5.1 86 127-226 3-90 (106)
158 2bmx_A Alkyl hydroperoxidase C 98.0 2.7E-05 9.1E-10 67.0 9.1 94 135-231 44-170 (195)
159 4fo5_A Thioredoxin-like protei 98.0 8.9E-06 3E-10 65.9 5.7 82 135-226 31-140 (143)
160 1zof_A Alkyl hydroperoxide-red 98.0 2.1E-05 7.1E-10 67.8 8.3 93 135-230 32-160 (198)
161 3uem_A Protein disulfide-isome 98.0 1.4E-05 4.7E-10 75.0 7.6 101 120-234 254-356 (361)
162 3dwv_A Glutathione peroxidase- 98.0 2.5E-05 8.5E-10 66.9 8.6 96 135-233 45-185 (187)
163 1we0_A Alkyl hydroperoxide red 97.9 3E-05 1E-09 66.1 8.9 95 135-232 30-158 (187)
164 3evi_A Phosducin-like protein 97.9 1.4E-05 4.8E-10 64.7 6.2 99 121-233 9-112 (118)
165 3us3_A Calsequestrin-1; calciu 97.9 4.6E-05 1.6E-09 72.5 10.6 99 121-231 19-124 (367)
166 3iv4_A Putative oxidoreductase 97.9 7E-05 2.4E-09 60.7 9.4 86 132-225 20-110 (112)
167 2ywm_A Glutaredoxin-like prote 97.9 7.1E-05 2.4E-09 65.5 10.1 86 134-232 134-221 (229)
168 2k6v_A Putative cytochrome C o 97.8 3.2E-05 1.1E-09 64.0 7.3 87 135-229 34-171 (172)
169 2obi_A PHGPX, GPX-4, phospholi 97.8 3.5E-05 1.2E-09 65.4 7.6 91 135-228 46-181 (183)
170 3kij_A Probable glutathione pe 97.8 9.8E-05 3.3E-09 62.5 9.8 94 135-232 37-171 (180)
171 2h01_A 2-Cys peroxiredoxin; th 97.8 6.5E-05 2.2E-09 64.3 8.6 93 135-230 30-158 (192)
172 1zye_A Thioredoxin-dependent p 97.8 7.3E-05 2.5E-09 66.1 8.9 95 135-232 55-186 (220)
173 1uul_A Tryparedoxin peroxidase 97.8 5.6E-05 1.9E-09 65.4 8.0 93 135-230 35-164 (202)
174 1a8l_A Protein disulfide oxido 97.8 0.00012 4E-09 63.8 9.6 92 134-231 20-113 (226)
175 1z6n_A Hypothetical protein PA 97.8 7E-05 2.4E-09 64.1 8.0 86 134-230 52-142 (167)
176 1qmv_A Human thioredoxin perox 97.7 3.7E-05 1.3E-09 66.2 6.2 93 135-230 33-162 (197)
177 2djk_A PDI, protein disulfide- 97.7 0.00015 5E-09 58.8 9.5 88 134-231 21-115 (133)
178 2p31_A CL683, glutathione pero 97.7 4E-05 1.4E-09 65.1 6.0 93 135-230 48-180 (181)
179 2b7k_A SCO1 protein; metalloch 97.7 0.00019 6.6E-09 62.1 10.4 96 135-234 40-182 (200)
180 3apo_A DNAJ homolog subfamily 97.7 2.6E-05 8.8E-10 80.9 5.5 97 122-229 123-219 (780)
181 3u5r_E Uncharacterized protein 97.7 0.0001 3.6E-09 64.8 8.6 98 135-236 57-192 (218)
182 2i81_A 2-Cys peroxiredoxin; st 97.7 0.0001 3.6E-09 64.9 8.4 93 135-230 51-179 (213)
183 2f8a_A Glutathione peroxidase 97.7 0.00016 5.5E-09 63.5 9.6 94 135-231 46-207 (208)
184 2gs3_A PHGPX, GPX-4, phospholi 97.7 7.7E-05 2.6E-09 63.6 7.3 92 135-229 48-184 (185)
185 2ls5_A Uncharacterized protein 96.9 5.7E-06 1.9E-10 68.2 0.0 97 128-227 25-144 (159)
186 1xzo_A BSSCO, hypothetical pro 97.7 0.00024 8.4E-09 58.8 9.9 93 135-231 32-172 (174)
187 2b5e_A Protein disulfide-isome 97.6 6.3E-05 2.2E-09 74.0 6.9 98 122-231 365-467 (504)
188 3qcp_A QSOX from trypanosoma b 97.6 7.2E-05 2.5E-09 74.4 6.4 103 123-232 31-153 (470)
189 1oai_A Nuclear RNA export fact 97.6 0.00011 3.9E-09 52.8 5.6 45 3-48 2-46 (59)
190 3ga4_A Dolichyl-diphosphooligo 97.5 0.00046 1.6E-08 60.1 10.1 92 107-205 9-113 (178)
191 3apo_A DNAJ homolog subfamily 97.5 0.00011 3.7E-09 76.2 6.8 117 108-233 649-769 (780)
192 1z96_A DNA-damage, UBA-domain 97.5 0.00014 5E-09 47.5 4.9 38 7-46 3-40 (40)
193 2hls_A Protein disulfide oxido 97.5 0.00047 1.6E-08 61.9 10.0 87 135-232 137-227 (243)
194 2lus_A Thioredoxion; CR-Trp16, 96.6 1.5E-05 5E-10 63.9 0.0 75 134-212 23-124 (143)
195 3ztl_A Thioredoxin peroxidase; 97.4 0.00019 6.6E-09 63.4 6.6 90 135-227 68-194 (222)
196 3gkn_A Bacterioferritin comigr 97.4 0.00044 1.5E-08 56.9 8.4 79 135-216 34-144 (163)
197 2jsy_A Probable thiol peroxida 97.4 0.00058 2E-08 56.5 8.9 89 135-230 43-166 (167)
198 2i3y_A Epididymal secretory gl 97.4 0.0012 4.2E-08 58.5 11.5 35 197-232 178-212 (215)
199 1wj7_A Hypothetical protein (R 97.4 0.00022 7.6E-09 56.9 5.3 42 7-49 38-79 (104)
200 1xvq_A Thiol peroxidase; thior 97.3 0.00058 2E-08 57.6 7.7 74 135-215 43-147 (175)
201 3a2v_A Probable peroxiredoxin; 97.3 0.00062 2.1E-08 62.0 8.1 93 135-230 32-161 (249)
202 2jp7_A MRNA export factor MEX6 97.3 0.00027 9.3E-09 50.5 4.4 44 4-48 2-45 (57)
203 4gqc_A Thiol peroxidase, perox 97.3 0.0012 4E-08 55.6 9.1 96 134-232 31-161 (164)
204 2c0g_A ERP29 homolog, windbeut 97.2 0.0014 4.7E-08 59.8 10.0 97 121-231 22-132 (248)
205 2qc7_A ERP31, ERP28, endoplasm 97.2 0.001 3.5E-08 60.3 9.1 96 121-229 11-117 (240)
206 2r37_A Glutathione peroxidase 97.2 0.0034 1.2E-07 55.1 11.4 35 197-232 160-194 (207)
207 2ywm_A Glutaredoxin-like prote 97.2 0.0022 7.6E-08 55.8 10.1 91 134-231 18-115 (229)
208 2e7p_A Glutaredoxin; thioredox 97.2 0.0007 2.4E-08 52.7 6.2 76 128-216 12-90 (116)
209 3uem_A Protein disulfide-isome 97.1 0.0026 8.7E-08 59.4 10.8 113 113-233 115-232 (361)
210 4g2e_A Peroxiredoxin; redox pr 97.1 0.002 6.7E-08 53.6 8.7 90 135-227 29-154 (157)
211 2c0d_A Thioredoxin peroxidase 97.1 0.0025 8.6E-08 56.5 9.5 93 135-230 55-183 (221)
212 3ixr_A Bacterioferritin comigr 97.0 0.0029 1E-07 53.6 9.1 92 135-229 50-176 (179)
213 2a4v_A Peroxiredoxin DOT5; yea 97.0 0.0033 1.1E-07 51.6 9.2 93 135-232 34-155 (159)
214 3me7_A Putative uncharacterize 97.0 0.0034 1.2E-07 52.7 9.3 100 135-235 27-166 (170)
215 2pn8_A Peroxiredoxin-4; thiore 97.0 0.002 7E-08 56.4 8.2 93 135-230 47-176 (211)
216 4hde_A SCO1/SENC family lipopr 97.0 0.0059 2E-07 51.4 10.7 95 132-230 28-169 (170)
217 2yzh_A Probable thiol peroxida 97.0 0.0045 1.5E-07 51.5 9.8 87 135-229 46-170 (171)
218 1wjk_A C330018D20RIK protein; 96.9 0.0012 4.2E-08 51.2 5.6 81 136-230 15-95 (100)
219 1n8j_A AHPC, alkyl hydroperoxi 96.9 0.0049 1.7E-07 52.6 9.9 93 135-230 29-155 (186)
220 4f9z_D Endoplasmic reticulum r 96.9 0.014 4.6E-07 51.4 12.8 108 121-231 116-225 (227)
221 1wji_A Tudor domain containing 96.8 0.0039 1.3E-07 45.2 7.1 41 8-50 9-49 (63)
222 4gew_A 5'-tyrosyl-DNA phosphod 96.8 0.0006 2.1E-08 64.9 3.4 41 8-49 45-85 (362)
223 1dv0_A DNA repair protein HHR2 96.8 0.00081 2.8E-08 46.1 3.0 42 6-49 2-43 (47)
224 1ttz_A Conserved hypothetical 96.7 0.0029 9.8E-08 48.3 6.3 75 140-231 3-77 (87)
225 1vg5_A RSGI RUH-014, rhomboid 96.7 0.0024 8.2E-08 47.8 5.4 42 7-50 28-69 (73)
226 2dah_A Ubiquilin-3; UBA domain 96.7 0.0028 9.5E-08 44.7 5.4 42 8-50 9-50 (54)
227 2g3q_A Protein YBL047C; endocy 96.7 0.0029 9.9E-08 42.1 5.2 39 8-48 4-42 (43)
228 2knz_A Ubiquilin-4; cytoplasm, 96.7 0.0032 1.1E-07 44.1 5.6 41 8-49 11-51 (53)
229 1ify_A HHR23A, UV excision rep 96.7 0.0022 7.4E-08 44.2 4.7 41 6-48 6-46 (49)
230 3qpm_A Peroxiredoxin; oxidored 96.7 0.003 1E-07 56.7 6.8 92 135-229 76-204 (240)
231 1eej_A Thiol:disulfide interch 96.6 0.0059 2E-07 53.5 8.2 86 134-231 84-211 (216)
232 3tjj_A Peroxiredoxin-4; thiore 96.6 0.0031 1.1E-07 57.3 6.5 91 135-228 90-217 (254)
233 2bwb_A Ubiquitin-like protein 96.5 0.0038 1.3E-07 42.5 5.0 39 8-47 7-45 (46)
234 1veg_A NEDD8 ultimate buster-1 96.5 0.0035 1.2E-07 48.1 5.3 41 8-50 29-69 (83)
235 3p7x_A Probable thiol peroxida 96.4 0.0066 2.3E-07 50.3 6.9 86 135-227 45-164 (166)
236 3gyk_A 27KDA outer membrane pr 96.3 0.028 9.4E-07 46.7 10.3 85 134-231 20-173 (175)
237 1v58_A Thiol:disulfide interch 96.3 0.0092 3.2E-07 53.4 7.4 94 133-234 94-236 (241)
238 4eo3_A Bacterioferritin comigr 96.3 0.036 1.2E-06 52.0 11.7 123 135-270 23-178 (322)
239 1wr1_B Ubiquitin-like protein 96.2 0.007 2.4E-07 43.2 5.1 39 9-48 18-56 (58)
240 2jy5_A Ubiquilin-1; UBA, alter 96.2 0.0074 2.5E-07 42.0 5.1 40 8-48 12-51 (52)
241 3kp9_A Vkorc1/thioredoxin doma 96.2 0.0032 1.1E-07 58.8 4.1 89 122-226 185-275 (291)
242 1wgn_A UBAP1, ubiquitin associ 96.2 0.0086 2.9E-07 43.2 5.2 45 4-50 15-59 (63)
243 1vej_A Riken cDNA 4931431F19; 96.1 0.011 3.9E-07 44.2 5.9 42 8-50 29-70 (74)
244 2cwb_A Chimera of immunoglobul 96.1 0.0092 3.1E-07 47.9 5.7 41 9-50 67-107 (108)
245 3zrd_A Thiol peroxidase; oxido 96.0 0.036 1.2E-06 47.9 9.7 85 135-226 77-199 (200)
246 2l2d_A OTU domain-containing p 96.0 0.011 3.7E-07 43.0 5.1 43 4-47 13-55 (73)
247 1wiv_A UBP14, ubiquitin-specif 95.9 0.012 4.1E-07 43.8 5.5 41 8-50 29-69 (73)
248 1psq_A Probable thiol peroxida 95.9 0.01 3.5E-07 49.0 5.6 87 135-228 41-162 (163)
249 2dkl_A Trinucleotide repeat co 95.9 0.013 4.5E-07 45.0 5.6 40 9-50 22-61 (85)
250 2hls_A Protein disulfide oxido 95.7 0.045 1.5E-06 48.8 9.5 86 133-231 22-117 (243)
251 1q98_A Thiol peroxidase, TPX; 95.7 0.012 4E-07 48.8 5.2 74 135-215 42-148 (165)
252 2dak_A Ubiquitin carboxyl-term 95.7 0.011 3.9E-07 42.5 4.3 42 7-50 8-49 (63)
253 1t3b_A Thiol:disulfide interch 95.6 0.024 8.1E-07 49.6 6.8 83 134-228 84-208 (211)
254 1tp9_A Peroxiredoxin, PRX D (t 95.5 0.037 1.3E-06 45.8 7.4 78 134-216 33-146 (162)
255 3keb_A Probable thiol peroxida 95.5 0.046 1.6E-06 49.0 8.5 88 135-234 47-179 (224)
256 1nm3_A Protein HI0572; hybrid, 95.4 0.052 1.8E-06 47.8 8.5 89 135-227 32-163 (241)
257 2v2g_A Peroxiredoxin 6; oxidor 95.4 0.041 1.4E-06 49.2 7.9 91 137-230 30-164 (233)
258 2dna_A Unnamed protein product 95.4 0.043 1.5E-06 40.3 6.4 42 9-51 20-61 (67)
259 2ooa_A E3 ubiquitin-protein li 95.2 0.039 1.3E-06 38.4 5.3 37 9-47 12-48 (52)
260 1hyu_A AHPF, alkyl hydroperoxi 95.2 0.13 4.3E-06 50.9 11.3 82 134-229 115-198 (521)
261 2fgx_A Putative thioredoxin; N 95.1 0.039 1.3E-06 43.8 6.1 76 138-226 30-106 (107)
262 1jkg_B TAP; NTF2-like domain, 95.0 0.004 1.4E-07 56.8 0.0 46 4-50 194-239 (250)
263 2dai_A Ubadc1, ubiquitin assoc 94.9 0.036 1.2E-06 42.3 5.2 41 8-50 29-69 (83)
264 2cp8_A NEXT to BRCA1 gene 1 pr 94.9 0.043 1.5E-06 38.6 5.0 46 5-51 5-51 (54)
265 1whc_A RSGI RUH-027, UBA/UBX 3 94.8 0.046 1.6E-06 39.5 5.2 41 8-50 9-50 (64)
266 2cpw_A CBL-interacting protein 94.7 0.037 1.3E-06 40.1 4.4 40 9-50 20-60 (64)
267 1otr_A Protein CUE2; protein-p 94.7 0.058 2E-06 37.2 5.1 42 8-49 4-45 (49)
268 1vdl_A Ubiquitin carboxyl-term 94.6 0.12 4.2E-06 38.5 7.0 42 8-49 24-65 (80)
269 2d9s_A CBL E3 ubiquitin protei 94.6 0.065 2.2E-06 37.4 5.2 40 8-49 9-48 (53)
270 1prx_A HORF6; peroxiredoxin, h 94.5 0.18 6.2E-06 44.4 9.5 91 137-230 32-168 (224)
271 2ekk_A UBA domain from E3 ubiq 94.3 0.061 2.1E-06 36.3 4.6 38 8-48 9-46 (47)
272 2k8s_A Thioredoxin; dimer, str 94.2 0.061 2.1E-06 39.0 4.9 60 140-210 4-66 (80)
273 2cp9_A EF-TS, EF-TSMT, elongat 94.2 0.047 1.6E-06 39.8 4.0 40 9-49 10-49 (64)
274 2dag_A Ubiquitin carboxyl-term 94.2 0.067 2.3E-06 39.9 5.0 41 8-50 9-50 (74)
275 3uma_A Hypothetical peroxiredo 94.1 0.13 4.4E-06 44.1 7.4 76 135-215 55-166 (184)
276 3h93_A Thiol:disulfide interch 94.1 0.14 4.8E-06 43.2 7.6 42 187-232 144-185 (192)
277 3sbc_A Peroxiredoxin TSA1; alp 93.9 0.26 9E-06 43.8 9.1 96 135-233 51-185 (216)
278 1wgl_A TOLL-interacting protei 93.7 0.14 4.8E-06 36.5 5.8 43 8-50 9-51 (59)
279 1ego_A Glutaredoxin; electron 93.5 0.19 6.3E-06 36.3 6.4 74 140-229 3-82 (85)
280 3mng_A Peroxiredoxin-5, mitoch 93.4 0.24 8.3E-06 41.9 7.8 76 135-215 42-155 (173)
281 2cq9_A GLRX2 protein, glutared 93.2 0.19 6.6E-06 40.3 6.5 76 123-211 14-92 (130)
282 1vek_A UBP14, ubiquitin-specif 92.8 0.17 5.6E-06 38.6 5.3 41 8-50 29-70 (84)
283 3tue_A Tryparedoxin peroxidase 92.7 0.37 1.3E-05 42.9 8.2 97 135-234 55-190 (219)
284 3hd5_A Thiol:disulfide interch 92.0 0.47 1.6E-05 39.9 7.7 22 135-156 24-45 (195)
285 2lbc_A Ubiquitin carboxyl-term 91.3 0.27 9.1E-06 39.9 5.1 41 8-50 78-118 (126)
286 2pwj_A Mitochondrial peroxired 91.1 0.61 2.1E-05 38.9 7.4 54 137-193 45-102 (171)
287 1xcc_A 1-Cys peroxiredoxin; un 91.0 0.49 1.7E-05 41.5 7.0 93 135-230 29-165 (220)
288 2crn_A Ubash3A protein; compac 90.8 0.36 1.2E-05 34.9 4.8 41 8-50 9-50 (64)
289 2wfc_A Peroxiredoxin 5, PRDX5; 90.7 0.35 1.2E-05 40.4 5.6 56 135-192 30-89 (167)
290 4ae4_A Ubiquitin-associated pr 90.4 0.36 1.2E-05 39.0 5.1 39 10-50 78-116 (118)
291 3gv1_A Disulfide interchange p 90.3 0.051 1.7E-06 45.2 -0.1 45 184-234 98-142 (147)
292 3bj5_A Protein disulfide-isome 90.0 1.7 6E-05 35.6 9.2 63 169-232 62-128 (147)
293 3rhb_A ATGRXC5, glutaredoxin-C 89.4 1.3 4.6E-05 33.9 7.6 75 123-210 6-84 (113)
294 2lva_A Ubiquitin carboxyl-term 88.9 0.07 2.4E-06 43.5 0.0 42 8-49 18-59 (129)
295 1fov_A Glutaredoxin 3, GRX3; a 89.3 2.3 7.9E-05 30.0 8.4 75 141-236 4-78 (82)
296 2znm_A Thiol:disulfide interch 89.1 2.8 9.6E-05 34.8 10.0 41 186-232 141-181 (195)
297 2ht9_A Glutaredoxin-2; thiored 88.2 1.2 3.9E-05 36.7 6.8 72 126-210 39-113 (146)
298 3ic4_A Glutaredoxin (GRX-1); s 87.9 2.6 9E-05 30.7 8.0 70 142-226 16-90 (92)
299 1kte_A Thioltransferase; redox 87.5 1.3 4.5E-05 33.1 6.3 60 140-210 14-79 (105)
300 3c1r_A Glutaredoxin-1; oxidize 87.3 1.1 3.6E-05 35.3 5.8 78 118-210 7-93 (118)
301 2lqo_A Putative glutaredoxin R 87.1 2.6 9E-05 32.0 7.7 70 144-230 10-83 (92)
302 1r7h_A NRDH-redoxin; thioredox 87.0 3.9 0.00013 28.1 8.2 70 140-225 3-72 (75)
303 2juj_A E3 ubiquitin-protein li 86.3 1.4 4.7E-05 30.9 5.0 44 5-50 4-47 (56)
304 2yan_A Glutaredoxin-3; oxidore 86.2 2.7 9.1E-05 31.9 7.4 67 129-210 10-83 (105)
305 2dhy_A CUE domain-containing p 85.8 1.2 4E-05 32.5 4.8 43 7-49 17-59 (67)
306 4ae4_A Ubiquitin-associated pr 85.6 1.4 4.6E-05 35.6 5.6 45 3-49 3-47 (118)
307 2hze_A Glutaredoxin-1; thiored 84.2 2 6.7E-05 33.2 5.9 60 140-210 21-86 (114)
308 2oo9_A E3 ubiquitin-protein li 83.3 2.5 8.5E-05 28.5 5.1 39 8-48 4-42 (46)
309 1h75_A Glutaredoxin-like prote 81.9 3.4 0.00012 29.1 6.0 65 140-221 3-68 (81)
310 1tr8_A Conserved protein (MTH1 81.8 1.5 5E-05 34.6 4.2 34 9-43 66-99 (102)
311 3q6o_A Sulfhydryl oxidase 1; p 81.2 7.3 0.00025 33.7 9.1 81 116-210 139-219 (244)
312 1sji_A Calsequestrin 2, calseq 81.1 7.8 0.00027 35.6 9.7 109 115-231 226-346 (350)
313 2klx_A Glutaredoxin; thioredox 80.9 3.7 0.00012 29.8 6.0 52 140-200 8-60 (89)
314 1wik_A Thioredoxin-like protei 80.5 5.1 0.00017 30.6 7.0 62 134-210 13-81 (109)
315 2rem_A Disulfide oxidoreductas 80.4 6.4 0.00022 32.4 8.1 40 186-232 146-185 (193)
316 2khp_A Glutaredoxin; thioredox 80.2 3.2 0.00011 30.2 5.4 57 140-210 8-67 (92)
317 3msz_A Glutaredoxin 1; alpha-b 78.6 3.5 0.00012 29.4 5.2 71 140-230 6-86 (89)
318 3nzn_A Glutaredoxin; structura 75.5 14 0.00048 27.6 8.1 73 140-226 24-101 (103)
319 2wci_A Glutaredoxin-4; redox-a 75.5 7.1 0.00024 31.6 6.7 71 124-210 23-101 (135)
320 1aip_C EF-TS, elongation facto 74.8 3 0.0001 36.6 4.4 41 8-49 3-43 (196)
321 1z6m_A Conserved hypothetical 74.4 13 0.00045 30.1 8.2 34 186-226 140-173 (175)
322 3us3_A Calsequestrin-1; calciu 74.1 13 0.00046 34.4 9.2 94 136-232 247-349 (367)
323 3kzq_A Putative uncharacterize 72.7 11 0.00037 31.8 7.6 46 186-233 160-205 (208)
324 2in3_A Hypothetical protein; D 72.6 12 0.0004 31.5 7.7 48 185-234 166-213 (216)
325 3ctg_A Glutaredoxin-2; reduced 71.5 7.4 0.00025 31.0 5.8 71 125-210 26-105 (129)
326 2r2j_A Thioredoxin domain-cont 71.4 15 0.00053 34.1 8.9 103 121-232 222-330 (382)
327 1xb2_B EF-TS, elongation facto 69.9 3.8 0.00013 38.0 4.2 38 9-47 5-42 (291)
328 3gx8_A Monothiol glutaredoxin- 69.6 16 0.00055 28.6 7.4 64 126-201 6-80 (121)
329 2qho_B E3 ubiquitin-protein li 69.5 11 0.00036 25.9 5.2 43 7-49 8-50 (53)
330 1oqy_A HHR23A, UV excision rep 69.4 2.3 7.9E-05 40.7 2.7 42 7-50 167-208 (368)
331 2h8l_A Protein disulfide-isome 69.3 13 0.00045 32.4 7.5 108 114-232 113-231 (252)
332 3h8q_A Thioredoxin reductase 3 69.2 16 0.00056 27.9 7.2 69 125-210 6-81 (114)
333 3qmx_A Glutaredoxin A, glutare 68.7 11 0.00038 28.4 6.0 59 141-210 19-78 (99)
334 4f82_A Thioredoxin reductase; 66.3 11 0.00037 32.1 6.1 47 135-184 46-96 (176)
335 2di0_A Activating signal coint 65.0 15 0.00053 26.9 5.8 42 7-48 12-53 (71)
336 2wem_A Glutaredoxin-related pr 65.0 13 0.00046 29.2 6.0 67 124-203 8-83 (118)
337 4dvc_A Thiol:disulfide interch 63.9 12 0.00042 30.1 5.8 43 185-231 140-182 (184)
338 3ipz_A Monothiol glutaredoxin- 63.1 23 0.00079 27.0 6.9 71 125-210 7-84 (109)
339 3t58_A Sulfhydryl oxidase 1; o 61.0 19 0.00067 35.5 7.6 83 134-232 155-237 (519)
340 1q0v_A Hydrophilic protein; ha 59.6 6.1 0.00021 29.8 2.8 22 252-273 8-29 (81)
341 1xiy_A Peroxiredoxin, pfaop; a 56.3 15 0.00053 31.0 5.2 55 135-192 42-102 (182)
342 3q8g_A CRAL-TRIO domain-contai 55.4 18 0.0006 33.4 5.9 45 3-47 34-84 (320)
343 3f4s_A Alpha-DSBA1, putative u 53.1 26 0.00089 30.5 6.3 47 186-233 161-213 (226)
344 3feu_A Putative lipoprotein; a 52.6 21 0.00073 29.7 5.5 43 185-231 142-184 (185)
345 3hz8_A Thiol:disulfide interch 52.2 11 0.00038 31.6 3.6 41 135-181 23-66 (193)
346 1p3q_Q VPS9P, vacuolar protein 52.2 6.9 0.00024 27.3 1.9 41 7-47 11-51 (54)
347 3l4n_A Monothiol glutaredoxin- 51.2 37 0.0012 27.0 6.4 62 128-201 6-76 (127)
348 1aua_A Phosphatidylinositol tr 51.2 25 0.00085 31.5 6.1 44 4-47 26-75 (296)
349 2cos_A Serine/threonine protei 50.6 19 0.00066 25.0 3.9 41 5-47 6-47 (54)
350 1un2_A DSBA, thiol-disulfide i 48.6 5.1 0.00017 34.3 0.9 54 136-189 113-169 (197)
351 2lbc_A Ubiquitin carboxyl-term 46.6 20 0.00069 28.5 4.2 40 9-50 4-44 (126)
352 1olm_A SEC14-like protein 2; l 46.5 30 0.001 32.5 6.0 44 4-47 8-58 (403)
353 1r5l_A Alpha-TTP, protein (alp 46.4 11 0.00037 33.0 2.7 45 3-47 3-56 (262)
354 1q0v_A Hydrophilic protein; ha 46.2 48 0.0016 24.9 5.8 18 254-271 53-70 (81)
355 3gmf_A Protein-disulfide isome 44.8 46 0.0016 28.4 6.5 43 186-235 158-201 (205)
356 2p9m_A Hypothetical protein MJ 44.6 48 0.0016 25.0 6.1 108 115-228 17-136 (138)
357 3zyw_A Glutaredoxin-3; metal b 44.1 66 0.0023 24.5 6.8 65 125-201 5-77 (111)
358 2axo_A Hypothetical protein AT 42.5 1.4E+02 0.0049 26.9 9.7 81 139-232 45-144 (270)
359 2o16_A Acetoin utilization pro 41.6 81 0.0028 24.8 7.2 65 159-232 75-139 (160)
360 1aba_A Glutaredoxin; electron 40.8 44 0.0015 23.8 5.0 45 147-201 13-70 (87)
361 4gqw_A CBS domain-containing p 40.1 65 0.0022 24.5 6.2 104 119-230 20-145 (152)
362 3hz8_A Thiol:disulfide interch 39.5 55 0.0019 27.2 6.1 41 185-232 144-184 (193)
363 2xhf_A Peroxiredoxin 5; oxidor 38.5 47 0.0016 27.8 5.4 57 135-193 41-100 (171)
364 3sl7_A CBS domain-containing p 38.4 81 0.0028 24.8 6.8 66 161-234 97-162 (180)
365 2d3g_P Ubiquitin interacting m 38.4 21 0.00072 21.0 2.2 16 255-270 3-18 (26)
366 3gha_A Disulfide bond formatio 37.7 60 0.002 27.3 6.1 41 186-233 154-194 (202)
367 1yav_A Hypothetical protein BS 37.3 54 0.0018 25.7 5.4 104 119-232 29-146 (159)
368 3lqn_A CBS domain protein; csg 37.3 29 0.00099 26.9 3.7 105 118-233 29-148 (150)
369 2h8l_A Protein disulfide-isome 36.3 2E+02 0.0069 24.5 9.6 95 124-235 13-113 (252)
370 1t1v_A SH3BGRL3, SH3 domain-bi 34.9 80 0.0027 22.8 5.7 62 139-210 4-71 (93)
371 3fv6_A YQZB protein; CBS domai 34.7 39 0.0013 26.7 4.2 115 113-236 23-152 (159)
372 3c7m_A Thiol:disulfide interch 34.2 28 0.00094 28.4 3.2 42 186-231 153-194 (195)
373 3bci_A Disulfide bond protein 33.5 53 0.0018 26.7 4.9 40 185-231 139-178 (186)
374 3l9v_A Putative thiol-disulfid 31.4 30 0.001 28.8 3.0 44 137-180 15-60 (189)
375 1nm3_A Protein HI0572; hybrid, 31.2 96 0.0033 26.3 6.4 66 123-200 153-224 (241)
376 4dbg_B Ring finger protein 31; 31.0 38 0.0013 28.6 3.5 37 8-45 102-138 (162)
377 3a1q_C Ubiquitin interaction m 30.9 34 0.0012 22.4 2.5 21 252-272 3-23 (45)
378 2d74_B Translation initiation 29.6 19 0.00066 30.0 1.5 75 115-236 33-107 (148)
379 1q02_A Sequestosome 1; helical 29.2 37 0.0013 23.4 2.5 36 8-45 10-47 (52)
380 1pbj_A Hypothetical protein; s 29.0 96 0.0033 22.7 5.4 99 118-227 13-121 (125)
381 3kxr_A Magnesium transporter, 28.9 86 0.003 26.3 5.6 102 122-231 70-177 (205)
382 3ihp_A Ubiquitin carboxyl-term 28.1 60 0.0021 34.1 5.3 40 8-49 720-759 (854)
383 2yzi_A Hypothetical protein PH 27.6 42 0.0014 25.4 3.1 105 115-229 16-130 (138)
384 4fry_A Putative signal-transdu 27.1 91 0.0031 24.2 5.1 101 117-228 24-135 (157)
385 2j9u_A VPS28, vacuolar protein 26.5 33 0.0011 26.5 2.2 24 20-47 70-93 (96)
386 3gby_A Uncharacterized protein 26.5 33 0.0011 25.9 2.2 108 111-228 9-126 (128)
387 2j9w_A VPS28, VPS28-PROV prote 26.5 33 0.0011 26.8 2.2 24 20-47 75-98 (102)
388 2hc5_A ORF 99, hypothetical pr 26.4 81 0.0028 25.0 4.6 30 196-229 68-97 (117)
389 1p9c_A 26S proteasome non-ATPa 25.4 30 0.001 23.0 1.5 17 254-270 20-36 (45)
390 2rr9_C Putative uncharacterize 25.4 39 0.0014 22.2 2.0 20 254-273 2-21 (46)
391 1u6t_A SH3 domain-binding glut 24.8 1.7E+02 0.0057 23.2 6.2 58 139-201 2-70 (121)
392 2k7r_A Primosomal protein DNAI 24.3 26 0.00088 27.1 1.2 19 153-171 23-41 (106)
393 2ef7_A Hypothetical protein ST 23.4 76 0.0026 23.7 3.8 104 119-232 17-129 (133)
394 3tdg_A DSBG, putative uncharac 22.3 29 0.00099 31.7 1.3 41 134-177 145-185 (273)
395 3l9v_A Putative thiol-disulfid 22.3 2E+02 0.0067 23.5 6.5 43 185-231 135-183 (189)
396 3gl5_A Putative DSBA oxidoredu 22.2 1.6E+02 0.0055 25.4 6.2 42 186-233 174-215 (239)
397 3ctu_A CBS domain protein; str 22.2 30 0.001 27.1 1.2 106 119-235 30-149 (156)
398 2wfc_A Peroxiredoxin 5, PRDX5; 22.0 84 0.0029 25.4 4.1 58 162-226 79-159 (167)
399 1y5h_A Hypothetical protein RV 21.6 91 0.0031 23.3 4.0 102 115-226 17-129 (133)
400 1vkf_A Glycerol uptake operon 21.5 78 0.0027 27.3 3.8 72 123-204 43-114 (188)
401 1yx4_A 26S proteasome non-ATPa 21.4 41 0.0014 27.5 1.9 21 251-271 105-125 (132)
402 3nqr_A Magnesium and cobalt ef 21.3 2.3E+02 0.0078 20.9 6.3 97 120-226 19-124 (127)
403 2j9l_A Chloride channel protei 21.3 98 0.0033 24.5 4.3 64 160-232 106-169 (185)
404 2oux_A Magnesium transporter; 20.8 2.4E+02 0.0081 24.8 7.2 102 121-231 152-262 (286)
405 2bkf_A Zinc-finger protein NBR 20.7 67 0.0023 24.4 2.8 30 116-145 57-86 (87)
406 3lhh_A CBS domain protein; str 20.7 1.1E+02 0.0038 24.4 4.5 97 122-228 60-164 (172)
407 2nyc_A Nuclear protein SNF4; b 20.6 2.2E+02 0.0076 21.1 6.1 104 115-227 20-140 (144)
408 3gn3_A Putative protein-disulf 20.5 78 0.0027 26.3 3.6 37 186-226 145-181 (182)
409 1wj6_A KIAA0049 protein, RSGI 20.2 75 0.0026 24.8 3.1 31 116-146 65-95 (101)
410 2ct6_A SH3 domain-binding glut 20.2 2.4E+02 0.0083 21.0 6.2 62 139-210 10-83 (111)
No 1
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=100.00 E-value=1.7e-33 Score=241.96 Aligned_cols=134 Identities=40% Similarity=0.788 Sum_probs=128.0
Q ss_pred CCcchhHHHhhhcCCCccccccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccC
Q 021440 101 TTDTSHDILASLYRPPFHVMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDD 180 (312)
Q Consensus 101 ~~~~~~~~La~lfrPP~~l~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~d 180 (312)
+.+++.++|+.+|+||+.|+|.++|++|++.||+++|||||+|+++||+.|++|+|+||+|++|+++|++|||+|+++++
T Consensus 7 ~~~~~~~~l~~lf~~p~~~~~~~~~~~Al~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~ 86 (153)
T 2dlx_A 7 GIDKKLTTLADLFRPPIDLMHKGSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHD 86 (153)
T ss_dssp CCCCCCCCCCCTTSCCTTTSCCSCHHHHHHHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESS
T ss_pred CCCchhhHHHHhhCCchhhhcccCHHHHHHHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecC
Confidence 45667899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhCCC
Q 021440 181 TSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRSPR 235 (312)
Q Consensus 181 s~EG~~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~~~~ 235 (312)
+++|..|++.|++..+|+++||||.||+.+.+|.| +++++|++.|.+|++++.-
T Consensus 87 ~~~~~~l~~~y~v~~~P~~~fld~~~G~~l~~~~g-~~~~~fl~~L~~~l~~~~~ 140 (153)
T 2dlx_A 87 SEEGQRYIQFYKLGDFPYVSILDPRTGQKLVEWHQ-LDVSSFLDQVTGFLGEHGQ 140 (153)
T ss_dssp SHHHHHHHHHHTCCSSSEEEEECTTTCCCCEEESS-CCHHHHHHHHHHHHHHTCS
T ss_pred CHhHHHHHHHcCCCCCCEEEEEeCCCCcEeeecCC-CCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999998998988977 8999999999999988753
No 2
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.96 E-value=1.4e-29 Score=222.74 Aligned_cols=133 Identities=21% Similarity=0.187 Sum_probs=123.2
Q ss_pred CcchhHHHhhhcCCCccccccccHHHHHHHH----HHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEe
Q 021440 102 TDTSHDILASLYRPPFHVMFNGSFEKAKDAA----LAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQE 177 (312)
Q Consensus 102 ~~~~~~~La~lfrPP~~l~~~gsf~~A~~~A----k~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~ 177 (312)
+..+.+.|++.|+++++.||.|+|++|++.| |+++||||||||+++|++|+.|||+||+|++|++||++|||+|++
T Consensus 17 ~~~F~~~f~~~yg~~~p~F~~gs~~~Al~~A~~~~k~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~nfV~w~~ 96 (178)
T 2ec4_A 17 LLQFTAEFSSRYGDCHPVFFIGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQNFITWAW 96 (178)
T ss_dssp HHHHHHHHHHHHCSCCCCCCCSCHHHHHHTTTSSCTTTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHHTEEEEEE
T ss_pred HHHHHHHHHHHhCCCCCCeeeCCHHHHHHHHHhhhhhhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHcCEEEEEE
Confidence 5678999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred ccCChh-------------HHHHHHh---cCCCCCCeEEEEeCCCC--eeEEEecCCCChHHHHHHHHHHHhhCC
Q 021440 178 YDDTSE-------------GWKVCSF---YNMDSIPAVLVIDPITG--QKICSWCGMINPQPLGEMLLPFMDRSP 234 (312)
Q Consensus 178 ~~ds~E-------------G~~~~~~---Y~~~~~P~i~IIdprTG--e~v~~~~G~~~~~~fl~~L~~fl~~~~ 234 (312)
|++++| |.+++.. |++..||+++||+++.+ +.+.+++|.+++++|++.|.++++++.
T Consensus 97 dv~~~e~~~~~~~~~~~~~g~~~a~~~~~~~~~~~P~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~~e~~~ 171 (178)
T 2ec4_A 97 DLTKDSNRARFLTMCNRHFGSVVAQTIRTQKTDQFPLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAAMEIFT 171 (178)
T ss_dssp ECCSHHHHHHHHHHHHHHTCHHHHHHHHHSCSTTCSEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHHHHHHH
T ss_pred eCCCchhhhhhhhhhhhhhHHHHHHHHhhcCCCCCCeEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHHHHHhh
Confidence 999999 5566655 89999999999998633 457789999999999999999999875
No 3
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.58 E-value=6.5e-15 Score=125.16 Aligned_cols=113 Identities=12% Similarity=0.167 Sum_probs=100.4
Q ss_pred cccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHH--------------
Q 021440 120 MFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGW-------------- 185 (312)
Q Consensus 120 ~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~-------------- 185 (312)
....+|++++..|+.++|++||+++.+||.+|+.|.+.+|.++.+.++++++|+|+.++.+.....
T Consensus 31 ~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~ 110 (172)
T 3f9u_A 31 AKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNKTPLTEPVKIMENGTERT 110 (172)
T ss_dssp CCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCCCEEEEEEEEEETTEEEE
T ss_pred cchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCcccccchhhhhhhcchhhh
Confidence 346789999999999999999999999999999999999999999999999999999998764311
Q ss_pred ----------HHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCC-hHHHHHHHHHHHhhC
Q 021440 186 ----------KVCSFYNMDSIPAVLVIDPITGQKICSWCGMIN-PQPLGEMLLPFMDRS 233 (312)
Q Consensus 186 ----------~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~-~~~fl~~L~~fl~~~ 233 (312)
-.+..|++..+|+++|||+ .|+.+..+.|+.+ +++|++.|.+.++++
T Consensus 111 ~~~~~~~~~~~~~~~~~v~~~Pt~~lid~-~G~~~~~~~G~~~~~~~l~~~l~~~l~~~ 168 (172)
T 3f9u_A 111 LRTVGDKWSYLQRVKFGANAQPFYVLIDN-EGNPLNKSYAYDEDISKYINFLQTGLENY 168 (172)
T ss_dssp EEEHHHHHHHHHHHHHSCCCSSEEEEECT-TSCBSSCCBCSCCCHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhHHHHHHcCCCCcceEEEECC-CCCEEeeccCCCCCHHHHHHHHHHHHHHh
Confidence 1167899999999999997 6999988899998 999999999988764
No 4
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.51 E-value=1.5e-13 Score=110.76 Aligned_cols=111 Identities=19% Similarity=0.221 Sum_probs=102.0
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEE
Q 021440 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVL 200 (312)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~ 200 (312)
...+|++++..|+.++|++||++.++||..|+.+...++.++.+.++++.+|+++.++.+..+...++..|++..+|+++
T Consensus 12 ~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~ 91 (130)
T 2kuc_A 12 RELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGVHAYPTLL 91 (130)
T ss_dssp BCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTTHHHHHHHTTCCSSCEEE
T ss_pred ccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcchHHHHHHcCCCCCCEEE
Confidence 46789999999999999999999999999999999999999999999999999999998887788899999999999999
Q ss_pred EEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021440 201 VIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (312)
Q Consensus 201 IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~ 232 (312)
|+|+ .|+.+..+.|..++++|.+.|.+.+..
T Consensus 92 ~~d~-~G~~~~~~~G~~~~~~l~~~l~~~~~~ 122 (130)
T 2kuc_A 92 FINS-SGEVVYRLVGAEDAPELLKKVKLGVES 122 (130)
T ss_dssp EECT-TSCEEEEEESCCCHHHHHHHHHHHHSC
T ss_pred EECC-CCcEEEEecCCCCHHHHHHHHHHHHHh
Confidence 9996 699998999999999988888887654
No 5
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.23 E-value=2.6e-15 Score=121.40 Aligned_cols=115 Identities=17% Similarity=0.172 Sum_probs=104.7
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEE
Q 021440 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVL 200 (312)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~ 200 (312)
+..+ ++++..|+.++|++||+++++||..|+.+.+.++.++.+.+.++.+|+|+.++.+..++..++..|++..+|+++
T Consensus 5 w~~~-~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~ 83 (130)
T 2lst_A 5 WYPY-PEALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPEGQELARRYRVPGTPTFV 83 (130)
Confidence 4444 899999999999999999999999999999999999999999999999999999888889999999999999999
Q ss_pred EEeCCCCee--EEEecCCCChHHHHHHHHHHHhhCCCC
Q 021440 201 VIDPITGQK--ICSWCGMINPQPLGEMLLPFMDRSPRK 236 (312)
Q Consensus 201 IIdprTGe~--v~~~~G~~~~~~fl~~L~~fl~~~~~~ 236 (312)
|+||..|+. +..+.|..++++|.+.|.+.+.+....
T Consensus 84 ~~d~~~G~~~~~~~~~G~~~~~~l~~~l~~~~~~~~~~ 121 (130)
T 2lst_A 84 FLVPKAGAWEEVGRLFGSRPRAEFLKELRQVCVKGGAC 121 (130)
Confidence 999988988 888999999999999998888776544
No 6
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.47 E-value=4.2e-13 Score=112.91 Aligned_cols=107 Identities=10% Similarity=0.143 Sum_probs=98.3
Q ss_pred ccHHHHHHHHHHcCCeEEEEee-cCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCCh---------hHHHHHHhcC
Q 021440 123 GSFEKAKDAALAQDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTS---------EGWKVCSFYN 192 (312)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq-~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~---------EG~~~~~~Y~ 192 (312)
.++.+++..|+.++|++||+|+ ++||.+|+.+...++.++.+.++.+.+|+++.++.+.. ....++..|+
T Consensus 34 ~~~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~ 113 (154)
T 2ju5_A 34 ESYAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYK 113 (154)
T ss_dssp ECHHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcC
Confidence 7899999999999999999999 89999999999999999999999988999999998763 4568899999
Q ss_pred CCCCCeEEEEeCCCCeeEEEecCCC--ChHHHHHHHHHHHh
Q 021440 193 MDSIPAVLVIDPITGQKICSWCGMI--NPQPLGEMLLPFMD 231 (312)
Q Consensus 193 ~~~~P~i~IIdprTGe~v~~~~G~~--~~~~fl~~L~~fl~ 231 (312)
+..+|+++|||+ .|+.+..+ |+. ++++|++.|.+.+.
T Consensus 114 v~~~Pt~~~~d~-~G~~~~~~-G~~~~~~~~l~~~l~~~l~ 152 (154)
T 2ju5_A 114 VTGFPELVFIDA-EGKQLARM-GFEPGGGAAYVSKVKSALK 152 (154)
T ss_dssp CCSSSEEEEECT-TCCEEEEE-CCCTTCHHHHHHHHHHHHT
T ss_pred CCCCCEEEEEcC-CCCEEEEe-cCCCCCHHHHHHHHHHHHh
Confidence 999999999997 69999989 998 89999999988875
No 7
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.46 E-value=1e-13 Score=118.17 Aligned_cols=112 Identities=16% Similarity=0.126 Sum_probs=95.6
Q ss_pred ccccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCe
Q 021440 119 VMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPA 198 (312)
Q Consensus 119 l~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~ 198 (312)
|-+..+|++|++.|++++|+|||+++.+||.+|+.|.+.++.+++|.++++.+||.+.++.+..+ .+..|.+..+|+
T Consensus 27 i~W~~~~~~al~~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD~e~~~---~~~~~~v~~~PT 103 (151)
T 3ph9_A 27 ITWVQTYEEGLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHETTD---KNLSPDGQYVPR 103 (151)
T ss_dssp SCCCSSHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEESSCCSC---GGGCTTCCCSSE
T ss_pred CcchhCHHHHHHHHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEecCCchh---hHhhcCCCCCCE
Confidence 44678999999999999999999999999999999999999999999999989999998754333 356788899999
Q ss_pred EEEEeCCCCeeEEEecCC-------C---ChHHHHHHHHHHHhhCC
Q 021440 199 VLVIDPITGQKICSWCGM-------I---NPQPLGEMLLPFMDRSP 234 (312)
Q Consensus 199 i~IIdprTGe~v~~~~G~-------~---~~~~fl~~L~~fl~~~~ 234 (312)
++++++ .|+.+..+.|+ . +.+.+|+.+.+.+.++.
T Consensus 104 ~~f~~~-~G~~v~~~~G~~~~~~~~~~~~~~~~ll~~~~~al~~~~ 148 (151)
T 3ph9_A 104 IMFVDP-SLTVRADIAGRYSNRLYTYEPRDLPLLIENMKKALRLIQ 148 (151)
T ss_dssp EEEECT-TSCBCTTCCCSCTTSTTCCCGGGHHHHHHHHHHHHSCCC
T ss_pred EEEECC-CCCEEEEEeCCcCCcccccchhhHHHHHHHHHHHHHHHh
Confidence 999998 59988888887 3 45667888888777654
No 8
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.41 E-value=6.4e-13 Score=115.91 Aligned_cols=110 Identities=12% Similarity=0.149 Sum_probs=88.3
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhc--------C
Q 021440 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFY--------N 192 (312)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y--------~ 192 (312)
..-.+++|++.|++++|.|||+|..+||.+|++|.+.+|.+++|.++++++||+..+|.+.. ..+...| +
T Consensus 24 W~~~~~ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~--~~l~~~y~~~~q~~~g 101 (173)
T 3ira_A 24 WYPWGEEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREER--PDIDNIYMTVCQIILG 101 (173)
T ss_dssp CBCSSHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTC--HHHHHHHHHHHHHHHS
T ss_pred CCCcCHHHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCccc--CcHHHHHHHHHHHHcC
Confidence 45556999999999999999999999999999999999999999999999999999987742 3344445 8
Q ss_pred CCCCCeEEEEeCCCCeeEEEec-----CCCChHHHHHHHHHHHhhC
Q 021440 193 MDSIPAVLVIDPITGQKICSWC-----GMINPQPLGEMLLPFMDRS 233 (312)
Q Consensus 193 ~~~~P~i~IIdprTGe~v~~~~-----G~~~~~~fl~~L~~fl~~~ 233 (312)
+..+|+++|++| .|+.+.... |..+...|++.|..+.+.+
T Consensus 102 v~g~Pt~v~l~~-dG~~v~~~ty~p~~~~~~~~~f~~~L~~v~~~~ 146 (173)
T 3ira_A 102 RGGWPLNIIMTP-GKKPFFAGTYIPKNTRFNQIGMLELVPRIKEIW 146 (173)
T ss_dssp CCCSSEEEEECT-TSCEEEEESSCCSSCBTTBCCHHHHHHHHHHHH
T ss_pred CCCCcceeeECC-CCCceeeeeeCCCCcCCCCCCHHHHHHHHHHHH
Confidence 999999999998 588876521 2233455766666665544
No 9
>2dam_A ETEA protein; KIAA0887, UBA-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.32 E-value=2.1e-12 Score=96.06 Aligned_cols=51 Identities=12% Similarity=0.191 Sum_probs=44.8
Q ss_pred CCCCchhhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCCC
Q 021440 1 MESESIDKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNEA 51 (312)
Q Consensus 1 m~~~s~~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~~~~ 51 (312)
|..++.+++++|.+|++||+.++.++|++||++++||||.||+.||+..++
T Consensus 11 ~~~Ls~~~~e~i~qF~~ITg~~d~~~A~~~Le~~~WnLe~Av~~ff~~~~~ 61 (67)
T 2dam_A 11 ERDLTQEQTEKLLQFQDLTGIESMDQCRHTLEQHNWNIEAAVQDRLNEQEG 61 (67)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHTSCHHHHHHHHHHSSCS
T ss_pred hhhcChhHHHHHHHHHHHhCCCCHHHHHHHHHHcCCCHHHHHHHHHhCCCC
Confidence 445678899999999999433999999999999999999999999997653
No 10
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.32 E-value=7e-12 Score=101.62 Aligned_cols=105 Identities=18% Similarity=0.206 Sum_probs=89.9
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCC-hhHHHHHHhcCC---CCCCe
Q 021440 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDT-SEGWKVCSFYNM---DSIPA 198 (312)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds-~EG~~~~~~Y~~---~~~P~ 198 (312)
.+|++++..|+.++|.+||+++++||.+|+.+.. +|.++.+.+.++.++.|+.++.+. .+...++..|++ ..+|+
T Consensus 16 ~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~-~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt 94 (133)
T 3fk8_A 16 TQVKKALAAGKRTHKPTLLVFGANWCTDCRALDK-SLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGIPA 94 (133)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHH-HHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGCSSE
T ss_pred hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH-HhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCccce
Confidence 4689999999999999999999999999999988 688899999998899999998843 456679999999 99999
Q ss_pred EEEEeCCCCeeEEEecC-------CCChHHHHHHHHHH
Q 021440 199 VLVIDPITGQKICSWCG-------MINPQPLGEMLLPF 229 (312)
Q Consensus 199 i~IIdprTGe~v~~~~G-------~~~~~~fl~~L~~f 229 (312)
++++|+ .|+.+....| ..+.+++.+.|.+.
T Consensus 95 ~~~~d~-~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 95 VVVVNS-DGKVRYTTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp EEEECT-TSCEEEECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred EEEECC-CCCEEEEecCCcccccccCCHHHHHHHHHHh
Confidence 999997 6999988888 56666665555543
No 11
>1v92_A NSFL1 cofactor P47; 3-helix bundle, recombination; NMR {Rattus norvegicus} SCOP: a.5.2.3
Probab=99.32 E-value=1.5e-12 Score=89.36 Aligned_cols=43 Identities=21% Similarity=0.434 Sum_probs=40.0
Q ss_pred hhhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcC
Q 021440 6 IDKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVN 49 (312)
Q Consensus 6 ~~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~~ 49 (312)
++++++|.+|++| ||++.++|++||++++|||+.||+.||+.+
T Consensus 3 ~~~~~~i~~F~~i-Tg~~~~~A~~~L~~~~wdle~Ai~~ff~~~ 45 (46)
T 1v92_A 3 EERQDALREFVAV-TGAEEDRARFFLESAGWDLQIALASFYEDG 45 (46)
T ss_dssp THHHHHHHHHHHH-TCCCHHHHHHHHHHTTSCSHHHHHHHHHTC
T ss_pred ccHHHHHHHHHHH-hCcCHHHHHHHHHHcCCCHHHHHHHHHcCC
Confidence 3588999999999 889999999999999999999999999864
No 12
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.30 E-value=9.2e-12 Score=101.86 Aligned_cols=110 Identities=15% Similarity=0.225 Sum_probs=91.3
Q ss_pred CCcc-ccccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCC--hhHHHHHHhc
Q 021440 115 PPFH-VMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDT--SEGWKVCSFY 191 (312)
Q Consensus 115 PP~~-l~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds--~EG~~~~~~Y 191 (312)
|+|. +--...|..++..++ +|++||+++++||.+|+.|...++.++.+.+.++ ++.|+.++.+. .+...++..|
T Consensus 11 ~~f~~~~~~~~~~~~l~~~~--~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~-~~~~~~vd~~~~~~~~~~l~~~~ 87 (134)
T 2fwh_A 11 LNFTQIKTVDELNQALVEAK--GKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA-DTVLLQANVTANDAQDVALLKHL 87 (134)
T ss_dssp CCCEECCSHHHHHHHHHHHT--TSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT-TSEEEEEECTTCCHHHHHHHHHT
T ss_pred CCcEEecCHHHHHHHHHHhc--CCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc-CcEEEEEeCCCCcchHHHHHHHc
Confidence 5554 333456777776554 8999999999999999999999999999998887 49999998876 5677899999
Q ss_pred CCCCCCeEEEEeCCCCeeE--EEecCCCChHHHHHHHHH
Q 021440 192 NMDSIPAVLVIDPITGQKI--CSWCGMINPQPLGEMLLP 228 (312)
Q Consensus 192 ~~~~~P~i~IIdprTGe~v--~~~~G~~~~~~fl~~L~~ 228 (312)
++..+|+++|+|+ .|+.+ ..+.|..++++|.+.|..
T Consensus 88 ~v~~~Pt~~~~d~-~G~~v~~~~~~G~~~~~~l~~~l~~ 125 (134)
T 2fwh_A 88 NVLGLPTILFFDG-QGQEHPQARVTGFMDAETFSAHLRD 125 (134)
T ss_dssp TCCSSSEEEEECT-TSCBCGGGCBCSCCCHHHHHHHHHH
T ss_pred CCCCCCEEEEECC-CCCEeeeeeeeeccCHHHHHHHHHh
Confidence 9999999999996 68887 678999999887776654
No 13
>2dal_A Protein KIAA0794; FAS associted factor 1, UBA-like domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.27 E-value=5.5e-12 Score=92.39 Aligned_cols=46 Identities=26% Similarity=0.299 Sum_probs=42.7
Q ss_pred CchhhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Q 021440 4 ESIDKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNE 50 (312)
Q Consensus 4 ~s~~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~~~ 50 (312)
++..++++|.+||+| ||+++++|++||++++||||.||++||+.++
T Consensus 11 ~s~~~~e~i~qF~~i-Tg~~~~~A~~~Le~~~WnLe~Av~~ff~~~~ 56 (62)
T 2dal_A 11 ASSALKGLIQQFTTI-TGASESVGKHMLEACNNNLEMAVTMFLDGGG 56 (62)
T ss_dssp SCHHHHHHHHHHHHH-TCCCHHHHHHHHHTTTSCHHHHHHHHHHSCC
T ss_pred cCccHHHHHHHHHHH-hCCCHHHHHHHHHHcCCCHHHHHHHHHcCCC
Confidence 466789999999999 8999999999999999999999999999764
No 14
>3e21_A HFAF1, FAS-associated factor 1; UBA, alternative splicing, apoptosis, nucleus, phosphoprotein; 1.73A {Homo sapiens}
Probab=99.24 E-value=3e-12 Score=87.87 Aligned_cols=42 Identities=24% Similarity=0.260 Sum_probs=35.6
Q ss_pred hhhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHh
Q 021440 6 IDKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFA 47 (312)
Q Consensus 6 ~~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~ 47 (312)
.+++++|++|++||+..+.++|++||+++||||+.||+.||.
T Consensus 3 ~d~de~ia~F~~iTG~~d~~~A~~~Lea~nWDLe~Av~~f~~ 44 (45)
T 3e21_A 3 MDREMILADFQACTGIENIDEAITLLEQNNWDLVAAINGVIP 44 (45)
T ss_dssp CCHHHHHHHHHHHHCCCCHHHHHHHHHHTTTCHHHHHTTC--
T ss_pred ccHHHHHHHHHHHHCCCCHHHHHHHHHHcCCcHHHHHHHHcC
Confidence 368999999999944455699999999999999999999985
No 15
>2dzl_A Protein FAM100B; UBA-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.18 E-value=2.4e-11 Score=90.10 Aligned_cols=49 Identities=24% Similarity=0.436 Sum_probs=42.7
Q ss_pred CCCCchh-hH-HHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Q 021440 1 MESESID-KE-SRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNE 50 (312)
Q Consensus 1 m~~~s~~-~~-~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~~~ 50 (312)
|+-++++ ++ ++|.+|++| ||+++++|++||++++||||.||+.||+...
T Consensus 8 ~~~~m~~~~~q~~i~qF~~i-Tg~~~~~A~~~Le~~~WdLe~Al~~ff~~~~ 58 (66)
T 2dzl_A 8 MSVNMDELRHQVMINQFVLA-AGCAADQAKQLLQAAHWQFETALSTFFQETN 58 (66)
T ss_dssp CSCCCHHHHHHHHHHHHHHH-HCCCHHHHHHHHHTTTTCHHHHHHHHHTCSC
T ss_pred hhHHhhcCccHHHHHHHHHH-cCCCHHHHHHHHHHcCCCHHHHHHHHHcCCC
Confidence 4445555 55 899999999 8999999999999999999999999998654
No 16
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.03 E-value=1.6e-09 Score=84.40 Aligned_cols=102 Identities=16% Similarity=0.142 Sum_probs=83.3
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEE
Q 021440 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLV 201 (312)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~I 201 (312)
..+|++++..+++.+|.+||+++++||..|+.+...+ ..+.+-+..++.|+.++.+. ...++..|++..+|+++|
T Consensus 10 ~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~ 84 (112)
T 1ep7_A 10 KAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLF---ETLSNDYAGKVIFLKVDVDA--VAAVAEAAGITAMPTFHV 84 (112)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTSEEEEEETTT--THHHHHHHTCCBSSEEEE
T ss_pred HHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHH---HHHHHHcCCCeEEEEEECCc--hHHHHHHcCCCcccEEEE
Confidence 4578999998888899999999999999999997654 34555555578999887764 457889999999999877
Q ss_pred EeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021440 202 IDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (312)
Q Consensus 202 IdprTGe~v~~~~G~~~~~~fl~~L~~fl~ 231 (312)
+. .|+.+..+.|. +++++.+.|.+.+.
T Consensus 85 ~~--~G~~~~~~~G~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 85 YK--DGVKADDLVGA-SQDKLKALVAKHAA 111 (112)
T ss_dssp EE--TTEEEEEEESC-CHHHHHHHHHHHHC
T ss_pred EE--CCeEEEEEcCC-CHHHHHHHHHHHhc
Confidence 73 69999889998 88888888877663
No 17
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.02 E-value=8.2e-10 Score=88.46 Aligned_cols=99 Identities=10% Similarity=0.169 Sum_probs=81.9
Q ss_pred HHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCCCCeeEE
Q 021440 132 ALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKIC 211 (312)
Q Consensus 132 Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdprTGe~v~ 211 (312)
+..++|.+||+++++||..|+.+...+ ..+.+-++.++.|+.++.+..+...++..|++..+|+++|+++ .|+.+.
T Consensus 22 ~~~~~k~~lv~f~a~wC~~C~~~~~~l---~~~~~~~~~~v~~~~v~~~~d~~~~~~~~~~v~~~Pt~~~~~~-~G~~~~ 97 (126)
T 2l57_A 22 EAKEGIPTIIMFKTDTCPYCVEMQKEL---SYVSKEREGKFNIYYARLEEEKNIDLAYKYDANIVPTTVFLDK-EGNKFY 97 (126)
T ss_dssp TCCSSSCEEEEEECSSCHHHHHHHHHH---HHHHHHSSSSCEEEEEETTSSHHHHHHHHTTCCSSSEEEEECT-TCCEEE
T ss_pred HHhCCCcEEEEEECCCCccHHHHHHHH---HHHHHHhcCCeEEEEEeCCCCchHHHHHHcCCcceeEEEEECC-CCCEEE
Confidence 556789999999999999999998755 4555555567999999855666778999999999999999997 699998
Q ss_pred EecCCCChHHHHHHHHHHHhhCC
Q 021440 212 SWCGMINPQPLGEMLLPFMDRSP 234 (312)
Q Consensus 212 ~~~G~~~~~~fl~~L~~fl~~~~ 234 (312)
.+.|..+.++|.+.|.+.+...+
T Consensus 98 ~~~G~~~~~~l~~~l~~~~~~~~ 120 (126)
T 2l57_A 98 VHQGLMRKNNIETILNSLGVKEG 120 (126)
T ss_dssp EEESCCCHHHHHHHHHHHCCCCC
T ss_pred EecCCCCHHHHHHHHHHHhcccc
Confidence 99999999988887777665443
No 18
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=98.97 E-value=3.8e-09 Score=85.22 Aligned_cols=100 Identities=11% Similarity=0.166 Sum_probs=81.2
Q ss_pred cccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc--cEEEEEeccCChhHHHHHHhcCCCCCC
Q 021440 120 MFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDSIP 197 (312)
Q Consensus 120 ~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~--nFIfwq~~~ds~EG~~~~~~Y~~~~~P 197 (312)
--..+|++++..|+.++|++||+++++||..|+.+... +.++.++ ++.|+.++.+. ...+++.|++..+|
T Consensus 22 ~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~------l~~l~~~~~~v~~~~vd~d~--~~~l~~~~~v~~~P 93 (124)
T 1xfl_A 22 HTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPF------FADLAKKLPNVLFLKVDTDE--LKSVASDWAIQAMP 93 (124)
T ss_dssp SSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHH------HHHHHHHCSSEEEEEEETTT--SHHHHHHTTCCSSS
T ss_pred CCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHH------HHHHHHHCCCcEEEEEECcc--CHHHHHHcCCCccC
Confidence 34567999999999999999999999999999999754 3444443 68899887764 45788999999999
Q ss_pred eEEEEeCCCCeeEEEecCCCChHHHHHHHHHHH
Q 021440 198 AVLVIDPITGQKICSWCGMINPQPLGEMLLPFM 230 (312)
Q Consensus 198 ~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl 230 (312)
+++|+. .|+.+..+.|. +++++.+.|.+++
T Consensus 94 t~~~~~--~G~~~~~~~G~-~~~~l~~~l~~~l 123 (124)
T 1xfl_A 94 TFMFLK--EGKILDKVVGA-KKDELQSTIAKHL 123 (124)
T ss_dssp EEEEEE--TTEEEEEEESC-CHHHHHHHHHHHC
T ss_pred EEEEEE--CCEEEEEEeCC-CHHHHHHHHHHhc
Confidence 988873 69999889994 8888877777654
No 19
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.96 E-value=3.8e-09 Score=84.64 Aligned_cols=104 Identities=12% Similarity=0.129 Sum_probs=83.4
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEE
Q 021440 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLV 201 (312)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~I 201 (312)
..+|++.+ .+.+|.+||+++++||..|+.+...+ +.+.+-++.++.|..++.+. ...++..|++..+|++.+
T Consensus 24 ~~~f~~~~---~~~~~~~lv~f~a~wC~~C~~~~~~~---~~~~~~~~~~~~~~~vd~~~--~~~l~~~~~v~~~Pt~~~ 95 (130)
T 2dml_A 24 PSNFNREV---IQSDGLWLVEFYAPWCGHCQRLTPEW---KKAATALKDVVKVGAVNADK--HQSLGGQYGVQGFPTIKI 95 (130)
T ss_dssp TTTHHHHT---TTCSSCEEEEEECTTCSTTGGGHHHH---HHHHHHTTTTSEEEEEETTT--CHHHHHHHTCCSSSEEEE
T ss_pred HHHHHHHH---hcCCCeEEEEEECCCCHHHHhhCHHH---HHHHHHhcCceEEEEEeCCC--CHHHHHHcCCCccCEEEE
Confidence 44566644 35689999999999999999998765 55666666678888887664 456889999999999999
Q ss_pred EeCCCCeeEEEecCCCChHHHHHHHHHHHhhCC
Q 021440 202 IDPITGQKICSWCGMINPQPLGEMLLPFMDRSP 234 (312)
Q Consensus 202 IdprTGe~v~~~~G~~~~~~fl~~L~~fl~~~~ 234 (312)
+++ .|+.+..+.|..+.+++++.|.+.+..++
T Consensus 96 ~~~-~~~~~~~~~G~~~~~~l~~~l~~~l~~~~ 127 (130)
T 2dml_A 96 FGA-NKNKPEDYQGGRTGEAIVDAALSALRSGP 127 (130)
T ss_dssp ESS-CTTSCEECCSCCSHHHHHHHHHHHHHHSS
T ss_pred EeC-CCCeEEEeecCCCHHHHHHHHHHHHhcCC
Confidence 996 35557778999999999999999887654
No 20
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=98.96 E-value=2.7e-09 Score=84.94 Aligned_cols=100 Identities=25% Similarity=0.316 Sum_probs=78.3
Q ss_pred cccccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc--cEEEEEeccCChhHHHHHHhcCCCC
Q 021440 118 HVMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDS 195 (312)
Q Consensus 118 ~l~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~--nFIfwq~~~ds~EG~~~~~~Y~~~~ 195 (312)
...-..+|++++..+ ++|++||+++++||.+|+.+.. .+.++.++ ++.|..++.+ +...++..|++..
T Consensus 15 ~~~t~~~f~~~l~~~--~~k~vlv~F~a~wC~~C~~~~p------~l~~l~~~~~~v~~~~vd~d--~~~~l~~~~~v~~ 84 (116)
T 3qfa_C 15 QIESKTAFQEALDAA--GDKLVVVDFSATWCGPSKMIKP------FFHSLSEKYSNVIFLEVDVD--DCQDVASECEVKS 84 (116)
T ss_dssp CCCCHHHHHHHHHHH--TTSCEEEEEECTTCHHHHHHHH------HHHHHHTTCTTSEEEEEETT--TTHHHHHHTTCCS
T ss_pred CCCCHHHHHHHHHhc--CCCEEEEEEECCCCHHHHHHHH------HHHHHHHHCCCCEEEEEECC--CCHHHHHHcCCcc
Confidence 334456678777544 7999999999999999999964 44555443 3788888776 4567899999999
Q ss_pred CCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHH
Q 021440 196 IPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFM 230 (312)
Q Consensus 196 ~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl 230 (312)
+|+++|+ +.|+.+..+.|. +++++.+.|.+.|
T Consensus 85 ~Pt~~~~--~~G~~~~~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 85 MPTFQFF--KKGQKVGEFSGA-NKEKLEATINELV 116 (116)
T ss_dssp SSEEEEE--SSSSEEEEEESC-CHHHHHHHHHHHC
T ss_pred ccEEEEE--eCCeEEEEEcCC-CHHHHHHHHHHhC
Confidence 9999999 369999999998 8888888777653
No 21
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=98.95 E-value=4.5e-09 Score=82.33 Aligned_cols=104 Identities=15% Similarity=0.224 Sum_probs=84.1
Q ss_pred cccccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc--cEEEEEeccCChhHHHHHHhcCCCC
Q 021440 118 HVMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDS 195 (312)
Q Consensus 118 ~l~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~--nFIfwq~~~ds~EG~~~~~~Y~~~~ 195 (312)
.+-...+|++++..|+..+|+++|+++++||..|+.+.. .+.++.++ ++.|..++.+. ...++..|++..
T Consensus 10 ~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~------~l~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~ 81 (118)
T 2vm1_A 10 ACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAP------VFAEYAKKFPGAIFLKVDVDE--LKDVAEAYNVEA 81 (118)
T ss_dssp ECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHH------HHHHHHHHCTTSEEEEEETTT--SHHHHHHTTCCS
T ss_pred EecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhH------HHHHHHHHCCCcEEEEEEccc--CHHHHHHcCCCc
Confidence 333456799999999999999999999999999999964 34555444 68888887664 567889999999
Q ss_pred CCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021440 196 IPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (312)
Q Consensus 196 ~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~ 232 (312)
+|+++|+. .|+.+..+.| .+++++.+.|.+++..
T Consensus 82 ~Pt~~~~~--~g~~~~~~~g-~~~~~l~~~l~~~~~~ 115 (118)
T 2vm1_A 82 MPTFLFIK--DGEKVDSVVG-GRKDDIHTKIVALMGS 115 (118)
T ss_dssp BSEEEEEE--TTEEEEEEES-CCHHHHHHHHHHHHC-
T ss_pred CcEEEEEe--CCeEEEEecC-CCHHHHHHHHHHHhcc
Confidence 99998884 6999988899 4888888888888754
No 22
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=98.95 E-value=5.1e-09 Score=82.99 Aligned_cols=107 Identities=11% Similarity=0.119 Sum_probs=83.6
Q ss_pred CccccccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCC
Q 021440 116 PFHVMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDS 195 (312)
Q Consensus 116 P~~l~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~ 195 (312)
...+.-..+|++++..|+..+|++||+++++||..|+.+...+ ..+.+-.. ++.|..++.+. ...++..|++..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l---~~~~~~~~-~~~~~~vd~~~--~~~~~~~~~v~~ 87 (122)
T 2vlu_A 14 VISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVF---ADLAKKFP-NAVFLKVDVDE--LKPIAEQFSVEA 87 (122)
T ss_dssp CEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHH---HHHHHHCT-TSEEEEEETTT--CHHHHHHTTCCS
T ss_pred ceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHH---HHHHHHCC-CcEEEEEECCC--CHHHHHHcCCCc
Confidence 3444556779999999999999999999999999999996532 22333333 37888887764 457889999999
Q ss_pred CCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021440 196 IPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (312)
Q Consensus 196 ~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~ 231 (312)
+|+++++. .|+.+..+.|.. ++++.+.|.+.+.
T Consensus 88 ~Pt~~~~~--~G~~~~~~~G~~-~~~l~~~l~~~l~ 120 (122)
T 2vlu_A 88 MPTFLFMK--EGDVKDRVVGAI-KEELTAKVGLHAA 120 (122)
T ss_dssp SSEEEEEE--TTEEEEEEESSC-HHHHHHHHHHHHS
T ss_pred ccEEEEEe--CCEEEEEEeCcC-HHHHHHHHHHHhc
Confidence 99988773 699998899988 8888888877764
No 23
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=98.95 E-value=3.6e-09 Score=83.97 Aligned_cols=95 Identities=23% Similarity=0.297 Sum_probs=71.6
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEE
Q 021440 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLV 201 (312)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~I 201 (312)
..+|++++..+ .+|+++|+++++||.+|+.|...+ +.+.+.. .+++|+.++.+ +...++..|++.++|++++
T Consensus 8 ~~~f~~~l~~~--~~k~vvv~F~a~wC~~C~~~~p~~---~~~~~~~-~~~~~~~vd~d--~~~~l~~~~~V~~~PT~~~ 79 (105)
T 3zzx_A 8 QEDFTKQLNEA--GNKLVVIDFYATWCGPCKMIAPKL---EELSQSM-SDVVFLKVDVD--ECEDIAQDNQIACMPTFLF 79 (105)
T ss_dssp HHHHHHHHHHT--TTSEEEEEEECTTCHHHHHHHHHH---HHHHHHC-TTEEEEEEETT--TCHHHHHHTTCCBSSEEEE
T ss_pred HHHHHHHHHhc--CCCEEEEEEECCCCCCccCCCcch---hhhhhcc-CCeEEEEEecc--cCHHHHHHcCCCeecEEEE
Confidence 45678877654 579999999999999999996543 2233322 35889888776 4567999999999999999
Q ss_pred EeCCCCeeEEEecCCCChHHHHHHHH
Q 021440 202 IDPITGQKICSWCGMINPQPLGEMLL 227 (312)
Q Consensus 202 IdprTGe~v~~~~G~~~~~~fl~~L~ 227 (312)
+. .|+.+..+.|. +++++.+.|.
T Consensus 80 ~~--~G~~v~~~~G~-~~~~l~~~i~ 102 (105)
T 3zzx_A 80 MK--NGQKLDSLSGA-NYDKLLELVE 102 (105)
T ss_dssp EE--TTEEEEEEESC-CHHHHHHHHH
T ss_pred EE--CCEEEEEEeCc-CHHHHHHHHH
Confidence 85 69999999995 6766544443
No 24
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.94 E-value=3.3e-09 Score=81.64 Aligned_cols=99 Identities=18% Similarity=0.264 Sum_probs=79.2
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEE
Q 021440 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVL 200 (312)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~ 200 (312)
-..+|++++ .++|++||+++++||..|+.+...+ ..+.+-...++.|..++.+ +...++..|++..+|+++
T Consensus 10 ~~~~~~~~~----~~~~~~lv~f~~~~C~~C~~~~~~~---~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~i~~~Pt~~ 80 (109)
T 3tco_A 10 TEENFDEVI----RNNKLVLVDCWAEWCAPCHLYEPIY---KKVAEKYKGKAVFGRLNVD--ENQKIADKYSVLNIPTTL 80 (109)
T ss_dssp CTTTHHHHH----HHSSEEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTSEEEEEETT--TCHHHHHHTTCCSSSEEE
T ss_pred cHHHHHHHH----hcCCeEEEEEECCCCHHHHhhhHHH---HHHHHHhCCCceEEEEccc--cCHHHHHhcCcccCCEEE
Confidence 345677766 3489999999999999999997543 3444445557888888765 455789999999999999
Q ss_pred EEeCCCCeeEEEecCCCChHHHHHHHHHHH
Q 021440 201 VIDPITGQKICSWCGMINPQPLGEMLLPFM 230 (312)
Q Consensus 201 IIdprTGe~v~~~~G~~~~~~fl~~L~~fl 230 (312)
++ +.|+.+..+.|..+.++|.+.|.+.|
T Consensus 81 ~~--~~g~~~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 81 IF--VNGQLVDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp EE--ETTEEEEEEESCCCHHHHHHHHHHHC
T ss_pred EE--cCCcEEEeeeccCCHHHHHHHHHHHh
Confidence 99 36999999999999999988888765
No 25
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=98.92 E-value=9.7e-09 Score=79.53 Aligned_cols=91 Identities=12% Similarity=0.178 Sum_probs=77.1
Q ss_pred HcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCCCCeeEEEe
Q 021440 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSW 213 (312)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdprTGe~v~~~ 213 (312)
..+|.+||+++++||..|+.+...+ +.+.+....++.|..++.+. ...++..|++..+|+++++. .|+.+..+
T Consensus 20 ~~~~~vlv~f~a~~C~~C~~~~~~~---~~~~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~--~g~~~~~~ 92 (111)
T 3gnj_A 20 DEGKACLVMFSRKNCHVCQKVTPVL---EELRLNYEESFGFYYVDVEE--EKTLFQRFSLKGVPQILYFK--DGEYKGKM 92 (111)
T ss_dssp TSCCCEEEEEECSSCHHHHHHHHHH---HHHHHHTTTTSEEEEEETTT--CHHHHHHTTCCSSCEEEEEE--TTEEEEEE
T ss_pred hcCCEEEEEEeCCCChhHHHHHHHH---HHHHHHcCCceEEEEEECCc--ChhHHHhcCCCcCCEEEEEE--CCEEEEEE
Confidence 6789999999999999999997654 55555666678899887765 45789999999999999994 69999899
Q ss_pred cCCCChHHHHHHHHHHHh
Q 021440 214 CGMINPQPLGEMLLPFMD 231 (312)
Q Consensus 214 ~G~~~~~~fl~~L~~fl~ 231 (312)
.|..+.+++.+.|.+.+.
T Consensus 93 ~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 93 AGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp ESSCCHHHHHHHHHHHHH
T ss_pred eccCCHHHHHHHHHHHhc
Confidence 999999999999888775
No 26
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=98.91 E-value=6.2e-09 Score=84.64 Aligned_cols=103 Identities=14% Similarity=0.157 Sum_probs=84.6
Q ss_pred cccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc--cEEEEEeccCChhHHHHHHhcCCCCCC
Q 021440 120 MFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDSIP 197 (312)
Q Consensus 120 ~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~--nFIfwq~~~ds~EG~~~~~~Y~~~~~P 197 (312)
....+|++++..|+.++|++||+++++||..|+.+... +.++.++ ++.|+.++.+. ...++..|++..+|
T Consensus 30 ~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~------l~~l~~~~~~v~~~~v~~~~--~~~~~~~~~v~~~P 101 (139)
T 3d22_A 30 TTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPY------YIELSENYPSLMFLVIDVDE--LSDFSASWEIKATP 101 (139)
T ss_dssp CSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHH------HHHHHHHCTTSEEEEEETTT--SHHHHHHTTCCEES
T ss_pred CCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHH------HHHHHHHCCCCEEEEEeCcc--cHHHHHHcCCCccc
Confidence 34568999999999999999999999999999999754 3444433 58888887764 45789999999999
Q ss_pred eEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhC
Q 021440 198 AVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRS 233 (312)
Q Consensus 198 ~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~~ 233 (312)
+++|+ +.|+.+..+.|. +++++.+.|.+.+..-
T Consensus 102 t~~~~--~~G~~~~~~~G~-~~~~l~~~l~~~~~~~ 134 (139)
T 3d22_A 102 TFFFL--RDGQQVDKLVGA-NKPELHKKITAILDSL 134 (139)
T ss_dssp EEEEE--ETTEEEEEEESC-CHHHHHHHHHHHHHTS
T ss_pred EEEEE--cCCeEEEEEeCC-CHHHHHHHHHHHhccC
Confidence 99888 369999999998 8888888888887653
No 27
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=98.90 E-value=1.4e-09 Score=88.91 Aligned_cols=97 Identities=5% Similarity=-0.082 Sum_probs=81.0
Q ss_pred cCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCCCCeeEEEec
Q 021440 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWC 214 (312)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdprTGe~v~~~~ 214 (312)
..+++||+|+.+||.+|++|++.|.....+..-.+ .+.+..++++......++..|++...|++++++ .|+.+.++.
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~-~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~--~G~ev~Ri~ 93 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGR-AAPVQRLQMRDPLPPGLELARPVTFTPTFVLMA--GDVESGRLE 93 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHH-HSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEE--TTEEEEEEE
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcc-cceEEEEECCCCCchhHHHHCCCCCCCEEEEEE--CCEEEeeec
Confidence 34789999999999999999999988877655443 356667777776666678889999999999999 699999999
Q ss_pred CCCChHHHHHHHHHHHhhCC
Q 021440 215 GMINPQPLGEMLLPFMDRSP 234 (312)
Q Consensus 215 G~~~~~~fl~~L~~fl~~~~ 234 (312)
|+++++.|+..|...+.+.+
T Consensus 94 G~~~~~~f~~~L~~~l~~~~ 113 (116)
T 3dml_A 94 GYPGEDFFWPMLARLIGQAE 113 (116)
T ss_dssp CCCCHHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHhhcC
Confidence 99999999999999887653
No 28
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=98.90 E-value=9.1e-09 Score=80.88 Aligned_cols=99 Identities=18% Similarity=0.192 Sum_probs=79.6
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEE
Q 021440 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVL 200 (312)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~ 200 (312)
...+|++++ .+|.+||+++++||..|+.+...+ +.+.+-++.++.|+.++.+.. ..++..|++..+|++.
T Consensus 7 ~~~~~~~~~-----~~~~~lv~f~a~wC~~C~~~~~~l---~~~~~~~~~~v~~~~vd~~~~--~~l~~~~~v~~~Pt~~ 76 (112)
T 2voc_A 7 TDQSFSAET-----SEGVVLADFWAPWCGPSKMIAPVL---EELDQEMGDKLKIVKIDVDEN--QETAGKYGVMSIPTLL 76 (112)
T ss_dssp CTTTHHHHH-----SSSEEEEEEECTTBGGGGGHHHHH---HHHHHHHTTTCEEEEEETTTC--CSHHHHTTCCSBSEEE
T ss_pred cHHHHHHHh-----CCCEEEEEEECCCCHHHHHHHHHH---HHHHHHhCCCcEEEEEECCCC--HHHHHHcCCCcccEEE
Confidence 345677777 789999999999999999998765 556666666899999887653 4688999999999999
Q ss_pred EEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021440 201 VIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (312)
Q Consensus 201 IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~ 231 (312)
++ . .|+.+..+.|..+.++|.+.|.+.+.
T Consensus 77 ~~-~-~G~~~~~~~G~~~~~~l~~~l~~~~~ 105 (112)
T 2voc_A 77 VL-K-DGEVVETSVGFKPKEALQELVNKHLL 105 (112)
T ss_dssp EE-E-TTEEEEEEESCCCHHHHHHHHHTTSC
T ss_pred EE-e-CCEEEEEEeCCCCHHHHHHHHHHHHH
Confidence 99 3 69999999999998876666554443
No 29
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=98.89 E-value=6.4e-09 Score=80.81 Aligned_cols=100 Identities=12% Similarity=0.189 Sum_probs=82.0
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc--cEEEEEeccCChhHHHHHHhcCCCCCCe
Q 021440 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDSIPA 198 (312)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~--nFIfwq~~~ds~EG~~~~~~Y~~~~~P~ 198 (312)
...+|++++..|+..+|.++|+++++||..|+.+... +.++.++ ++.|+.++.+. ...++..|++..+|+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~------l~~~~~~~~~v~~~~v~~~~--~~~~~~~~~v~~~Pt 82 (113)
T 1ti3_A 11 TVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPI------FAELAKKFPNVTFLKVDVDE--LKAVAEEWNVEAMPT 82 (113)
T ss_dssp SHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHH------HHHHHHHCSSEEEEEEETTT--CHHHHHHHHCSSTTE
T ss_pred cHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHH------HHHHHHhCCCcEEEEEEccc--cHHHHHhCCCCcccE
Confidence 4567899999999999999999999999999999643 4444443 68888887764 456888999999999
Q ss_pred EEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021440 199 VLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (312)
Q Consensus 199 i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~ 231 (312)
++++. .|+.+..+.| .+++++.+.|.+++.
T Consensus 83 ~~~~~--~G~~~~~~~g-~~~~~l~~~l~~~~~ 112 (113)
T 1ti3_A 83 FIFLK--DGKLVDKTVG-ADKDGLPTLVAKHAT 112 (113)
T ss_dssp EEEEE--TTEEEEEEEC-CCTTHHHHHHHHHHH
T ss_pred EEEEe--CCEEEEEEec-CCHHHHHHHHHHhhc
Confidence 99884 6999988899 588888888887764
No 30
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.89 E-value=8.9e-09 Score=82.47 Aligned_cols=101 Identities=13% Similarity=0.135 Sum_probs=81.8
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhh----ccEEEEEeccCChhHHHHHHhcCCCCCCe
Q 021440 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS----VNFIFWQEYDDTSEGWKVCSFYNMDSIPA 198 (312)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~----~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~ 198 (312)
.+|++++ .+.+|.+||+++++||..|+.+...+ ..+.+-++ .++.|..++.+. ...++..|++..+|+
T Consensus 15 ~~~~~~~---~~~~~~~lv~f~a~wC~~C~~~~~~~---~~~~~~~~~~~~~~~~~~~vd~~~--~~~l~~~~~v~~~Pt 86 (133)
T 1x5d_A 15 DSFDKNV---LDSEDVWMVEFYAPWCGHCKNLEPEW---AAAASEVKEQTKGKVKLAAVDATV--NQVLASRYGIRGFPT 86 (133)
T ss_dssp THHHHHT---TTSSSEEEEEEECTTCHHHHTHHHHH---HHHHHHHHHHTTTSEEEEEEETTT--CCHHHHHHTCCSSSE
T ss_pred hhHHHHH---hcCCCeEEEEEECCCCHHHHhhcHHH---HHHHHHHHhhcCCcEEEEEEECCC--CHHHHHhCCCCeeCe
Confidence 4455443 35689999999999999999997655 45555555 679999887764 457889999999999
Q ss_pred EEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhC
Q 021440 199 VLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRS 233 (312)
Q Consensus 199 i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~~ 233 (312)
+.|+++ |+.+..+.|..+.+++.+.|.+.+...
T Consensus 87 ~~~~~~--g~~~~~~~G~~~~~~l~~~l~~~~~~~ 119 (133)
T 1x5d_A 87 IKIFQK--GESPVDYDGGRTRSDIVSRALDLFSDN 119 (133)
T ss_dssp EEEEET--TEEEEEECSCCSHHHHHHHHHHHHHHH
T ss_pred EEEEeC--CCceEEecCCCCHHHHHHHHHHHhhcc
Confidence 999996 888888999999999999999988764
No 31
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=98.89 E-value=9.3e-09 Score=79.98 Aligned_cols=101 Identities=16% Similarity=0.143 Sum_probs=81.5
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEE
Q 021440 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLV 201 (312)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~I 201 (312)
..+|++.+ ...+|.+||+++++||..|+.+...+ +.+.+.+..++.|+.++.+. ...++..|++..+|++++
T Consensus 14 ~~~~~~~~---~~~~~~~lv~f~~~~C~~C~~~~~~l---~~~~~~~~~~v~~~~v~~~~--~~~~~~~~~v~~~Pt~~~ 85 (115)
T 1thx_A 14 DAEFESEV---LKAEQPVLVYFWASWCGPCQLMSPLI---NLAANTYSDRLKVVKLEIDP--NPTTVKKYKVEGVPALRL 85 (115)
T ss_dssp GGGHHHHT---TTCSSCEEEEEECTTCTTHHHHHHHH---HHHHHHTTTTCEEEEEESTT--CHHHHHHTTCCSSSEEEE
T ss_pred ccchhhHh---hcCCceEEEEEECCCCHHHHHhHHHH---HHHHHHhCCcEEEEEEEcCC--CHHHHHHcCCCceeEEEE
Confidence 34565554 46789999999999999999998755 55666666678888887764 456889999999999999
Q ss_pred EeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021440 202 IDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (312)
Q Consensus 202 IdprTGe~v~~~~G~~~~~~fl~~L~~fl~~ 232 (312)
+ + .|+.+..+.|..+.+++.+.|.+.+..
T Consensus 86 ~-~-~G~~~~~~~g~~~~~~l~~~l~~~l~~ 114 (115)
T 1thx_A 86 V-K-GEQILDSTEGVISKDKLLSFLDTHLNN 114 (115)
T ss_dssp E-E-TTEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred E-c-CCEEEEEecCCCCHHHHHHHHHHHhcC
Confidence 9 3 699998899999999999888887754
No 32
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=98.88 E-value=1.4e-08 Score=83.71 Aligned_cols=103 Identities=13% Similarity=0.152 Sum_probs=84.2
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEE
Q 021440 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVL 200 (312)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~ 200 (312)
-..+|++++ ..+|++||+++++||..|+.+...+ ..+.+-++.++.|..++.+. ...++..|++..+|+++
T Consensus 44 ~~~~~~~~~----~~~k~vlv~F~a~wC~~C~~~~p~l---~~~~~~~~~~~~~~~vd~~~--~~~l~~~~~v~~~Pt~~ 114 (148)
T 3p2a_A 44 TAETLDKLL----QDDLPMVIDFWAPWCGPCRSFAPIF---AETAAERAGKVRFVKVNTEA--EPALSTRFRIRSIPTIM 114 (148)
T ss_dssp CTTTHHHHT----TCSSCEEEEEECSSCHHHHHHHHHH---HHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCSSSEEE
T ss_pred CHHHHHHHH----hcCCcEEEEEECCCCHHHHHHHHHH---HHHHHHcCCceEEEEEECcC--CHHHHHHCCCCccCEEE
Confidence 345677666 7899999999999999999996544 44555555678898887664 45788999999999999
Q ss_pred EEeCCCCeeEEEecCCCChHHHHHHHHHHHhhCC
Q 021440 201 VIDPITGQKICSWCGMINPQPLGEMLLPFMDRSP 234 (312)
Q Consensus 201 IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~~~ 234 (312)
++. .|+.+..+.|..+.++|.+.|.+.+...+
T Consensus 115 ~~~--~G~~~~~~~G~~~~~~l~~~l~~~l~~~~ 146 (148)
T 3p2a_A 115 LYR--NGKMIDMLNGAVPKAPFDNWLDEQLSRDP 146 (148)
T ss_dssp EEE--TTEEEEEESSCCCHHHHHHHHHHHHHSCC
T ss_pred EEE--CCeEEEEEeCCCCHHHHHHHHHHHhcccC
Confidence 995 69999999999999999999999887643
No 33
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=98.87 E-value=9.6e-09 Score=78.75 Aligned_cols=97 Identities=19% Similarity=0.162 Sum_probs=79.1
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEE
Q 021440 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVL 200 (312)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~ 200 (312)
-..+|++++ .+|.+||+++++||..|+.+...+ ..+.+-++.++.|..++.+. ...++..|++..+|+++
T Consensus 9 ~~~~~~~~~-----~~~~~lv~f~~~~C~~C~~~~~~~---~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~ 78 (106)
T 3die_A 9 TDADFDSKV-----ESGVQLVDFWATACGPCKMIAPVL---EELAADYEGKADILKLDVDE--NPSTAAKYEVMSIPTLI 78 (106)
T ss_dssp CTTTHHHHS-----CSSEEEEEEECSBCHHHHHHHHHH---HHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCSBSEEE
T ss_pred CHHHHHHHh-----cCCcEEEEEECCCCHHHHHHhHHH---HHHHHHhcCCcEEEEEECCc--CHHHHHhCCCcccCEEE
Confidence 456677777 799999999999999999997655 56666666678888887654 45688999999999999
Q ss_pred EEeCCCCeeEEEecCCCChHHHHHHHHHH
Q 021440 201 VIDPITGQKICSWCGMINPQPLGEMLLPF 229 (312)
Q Consensus 201 IIdprTGe~v~~~~G~~~~~~fl~~L~~f 229 (312)
+++ .|+.+..+.|..+.+++.+.|.+.
T Consensus 79 ~~~--~G~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 3die_A 79 VFK--DGQPVDKVVGFQPKENLAEVLDKH 105 (106)
T ss_dssp EEE--TTEEEEEEESCCCHHHHHHHHHTT
T ss_pred EEe--CCeEEEEEeCCCCHHHHHHHHHHh
Confidence 996 699999999999988877776543
No 34
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=98.86 E-value=1.2e-08 Score=78.68 Aligned_cols=95 Identities=16% Similarity=0.196 Sum_probs=76.2
Q ss_pred HHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCCCCe
Q 021440 129 KDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQ 208 (312)
Q Consensus 129 ~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdprTGe 208 (312)
.....+.+|.+||+++++||..|+.+...+ ..+.+-++.++.|..++.+. ...++..|++..+|++.++. .|+
T Consensus 12 ~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~--~G~ 84 (107)
T 1dby_A 12 KNVVLESSVPVLVDFWAPWCGPCRIIAPVV---DEIAGEYKDKLKCVKLNTDE--SPNVASEYGIRSIPTIMVFK--GGK 84 (107)
T ss_dssp HHHTTTCSSCEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTCEEEEEETTT--CHHHHHHHTCCSSCEEEEES--SSS
T ss_pred HHHHhcCCCcEEEEEECCCCHhHHHHHHHH---HHHHHHhCCceEEEEEECCC--CHHHHHHCCCCcCCEEEEEe--CCE
Confidence 334456789999999999999999997654 45555566678888887664 45688999999999988873 699
Q ss_pred eEEEecCCCChHHHHHHHHHHH
Q 021440 209 KICSWCGMINPQPLGEMLLPFM 230 (312)
Q Consensus 209 ~v~~~~G~~~~~~fl~~L~~fl 230 (312)
.+..+.|..+.+++.+.|.+++
T Consensus 85 ~~~~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 85 KCETIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp EEEEEESCCCHHHHHHHHHHHC
T ss_pred EEEEEeCCCCHHHHHHHHHHHh
Confidence 9988999999998888887765
No 35
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=98.86 E-value=1.3e-08 Score=80.98 Aligned_cols=92 Identities=13% Similarity=0.195 Sum_probs=74.4
Q ss_pred HHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCCCCeeEE
Q 021440 132 ALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKIC 211 (312)
Q Consensus 132 Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdprTGe~v~ 211 (312)
..+.+|.+||+++++||..|+.+...+ ..+.+-+..++.|+.++.+. ...++..|++..+|+++|+ +.|+.+.
T Consensus 27 v~~~~k~vlv~f~a~~C~~C~~~~~~l---~~~~~~~~~~v~~~~vd~d~--~~~l~~~~~v~~~Pt~~~~--~~G~~~~ 99 (119)
T 1w4v_A 27 VVNSETPVVVDFHAQWCGPCKILGPRL---EKMVAKQHGKVVMAKVDIDD--HTDLAIEYEVSAVPTVLAM--KNGDVVD 99 (119)
T ss_dssp TTTCSSCEEEEEECTTCHHHHHHHHHH---HHHHHHTTTSSEEEEEETTT--THHHHHHTTCCSSSEEEEE--ETTEEEE
T ss_pred HHcCCCcEEEEEECCCCHHHHHHHHHH---HHHHHHhcCCeEEEEEeCCC--CHHHHHHcCCCcccEEEEE--eCCcEEE
Confidence 345789999999999999999997654 34444445578898887765 4478899999999999999 3699988
Q ss_pred EecCCCChHHHHHHHHHHH
Q 021440 212 SWCGMINPQPLGEMLLPFM 230 (312)
Q Consensus 212 ~~~G~~~~~~fl~~L~~fl 230 (312)
.+.|..+++.+.+.|.+.+
T Consensus 100 ~~~G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 100 KFVGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp EEESCCCHHHHHHHHHHHH
T ss_pred EEcCCCCHHHHHHHHHHHh
Confidence 8999999998888887765
No 36
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=98.84 E-value=1.3e-08 Score=78.14 Aligned_cols=97 Identities=16% Similarity=0.169 Sum_probs=77.5
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEEE
Q 021440 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVI 202 (312)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~II 202 (312)
.+|++++ +.+|++||+++++||..|+.+...+ ..+.+-+..++.|+.++.+. ...++..|++..+|++.++
T Consensus 9 ~~~~~~~----~~~~~~lv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~ 79 (109)
T 2yzu_A 9 QNFDETL----GQHPLVLVDFWAEWCAPCRMIAPIL---EEIAKEYEGKLLVAKLDVDE--NPKTAMRYRVMSIPTVILF 79 (109)
T ss_dssp TTHHHHH----HHCSEEEEEEECTTCHHHHHHHHHH---HHHHHHTBTTBEEEEEETTT--CHHHHHHTTCCSSSEEEEE
T ss_pred hHHHHHh----cCCCeEEEEEECCCCHHHHHhhHHH---HHHHHHhhCceEEEEEECCC--CHhHHHhCCCCcCCEEEEE
Confidence 4566443 5689999999999999999997654 45655666679999887765 3468899999999999999
Q ss_pred eCCCCeeEEEecCCCChHHHHHHHHHHH
Q 021440 203 DPITGQKICSWCGMINPQPLGEMLLPFM 230 (312)
Q Consensus 203 dprTGe~v~~~~G~~~~~~fl~~L~~fl 230 (312)
..|+.+..+.|..+.+++.+.|.+.+
T Consensus 80 --~~g~~~~~~~g~~~~~~l~~~l~~~l 105 (109)
T 2yzu_A 80 --KDGQPVEVLVGAQPKRNYQAKIEKHL 105 (109)
T ss_dssp --ETTEEEEEEESCCCHHHHHHHHHTTC
T ss_pred --eCCcEeeeEeCCCCHHHHHHHHHHHh
Confidence 36999988999998888777776654
No 37
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=98.84 E-value=4.6e-09 Score=80.76 Aligned_cols=92 Identities=16% Similarity=0.134 Sum_probs=73.6
Q ss_pred HHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCCCCeeE
Q 021440 131 AALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKI 210 (312)
Q Consensus 131 ~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdprTGe~v 210 (312)
.+.+.+|.+||+++++||..|+.+...+ +.+.+-...++.|..++.+. ...++..|++..+|++.++ + .|+.+
T Consensus 12 ~~~~~~~~~~v~f~~~~C~~C~~~~~~l---~~~~~~~~~~v~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~-~-~G~~~ 84 (105)
T 1nsw_A 12 QAIQGDGPVLVDFWAAWCGPCRMMAPVL---EEFAEAHADKVTVAKLNVDE--NPETTSQFGIMSIPTLILF-K-GGRPV 84 (105)
T ss_dssp HHHSSSSCEEEEEECTTCHHHHHHHHHH---HHHHHHSTTTCEEEEEETTT--CHHHHHHTTCCSSSEEEEE-E-TTEEE
T ss_pred HHHhCCCcEEEEEECCCCHHHHHHHHHH---HHHHHHhcCCcEEEEEECcC--CHHHHHHcCCccccEEEEE-e-CCeEE
Confidence 3456789999999999999999997654 45555566668888887764 4578899999999999999 3 69988
Q ss_pred EEecCCCChHHHHHHHHHH
Q 021440 211 CSWCGMINPQPLGEMLLPF 229 (312)
Q Consensus 211 ~~~~G~~~~~~fl~~L~~f 229 (312)
..+.|..+++++.+.|.+.
T Consensus 85 ~~~~G~~~~~~l~~~l~~~ 103 (105)
T 1nsw_A 85 KQLIGYQPKEQLEAQLADV 103 (105)
T ss_dssp EEEESCCCHHHHHHHTTTT
T ss_pred EEEecCCCHHHHHHHHHHH
Confidence 8899999888776666543
No 38
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=98.84 E-value=1.5e-08 Score=77.84 Aligned_cols=97 Identities=15% Similarity=0.179 Sum_probs=78.0
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEE
Q 021440 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLV 201 (312)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~I 201 (312)
..+|++++ .+.+|.+||+++++||..|+.+...+ ..+.+-+..++.|+.++.+. ...++..|++..+|++++
T Consensus 9 ~~~~~~~~---~~~~~~~lv~f~~~~C~~C~~~~~~~---~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~ 80 (107)
T 2i4a_A 9 DSSFDQDV---LKASGLVLVDFWAEWCGPCKMIGPAL---GEIGKEFAGKVTVAKVNIDD--NPETPNAYQVRSIPTLML 80 (107)
T ss_dssp TTTHHHHT---TTCSSEEEEEEECTTCHHHHHHHHHH---HHHHHHHTTSEEEEEEETTT--CCHHHHHTTCCSSSEEEE
T ss_pred hhhhhHHH---HhCCCEEEEEEECCCChhHHHHhHHH---HHHHHHhCCcEEEEEEECCC--CHHHHHhcCCCccCEEEE
Confidence 34565544 46789999999999999999998765 55666666689999887764 346888999999999999
Q ss_pred EeCCCCeeEEEecCCCChHHHHHHHHH
Q 021440 202 IDPITGQKICSWCGMINPQPLGEMLLP 228 (312)
Q Consensus 202 IdprTGe~v~~~~G~~~~~~fl~~L~~ 228 (312)
+ ..|+.+..+.|..+.+++.+.|.+
T Consensus 81 ~--~~G~~~~~~~G~~~~~~l~~~l~~ 105 (107)
T 2i4a_A 81 V--RDGKVIDKKVGALPKSQLKAWVES 105 (107)
T ss_dssp E--ETTEEEEEEESCCCHHHHHHHHHH
T ss_pred E--eCCEEEEEecCCCCHHHHHHHHHh
Confidence 9 369999899999998887776655
No 39
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=98.84 E-value=4.7e-09 Score=89.22 Aligned_cols=118 Identities=18% Similarity=0.174 Sum_probs=85.6
Q ss_pred HHhhhcCCCccccccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHh--hccEEEEEeccCChhHH
Q 021440 108 ILASLYRPPFHVMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQII--SVNFIFWQEYDDTSEGW 185 (312)
Q Consensus 108 ~La~lfrPP~~l~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i--~~nFIfwq~~~ds~EG~ 185 (312)
.+...|.+.+.. .+|++++..+..++|++||+++.+||.+|+.+...+ .. +.++. +-+||...++.+...
T Consensus 21 ~~~~~~~~~i~w---~~~~~~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l-~~--~~~~~~~~~~~~~v~~d~~~~~-- 92 (164)
T 1sen_A 21 GLGKGFGDHIHW---RTLEDGKKEAAASGLPLMVIIHKSWCGACKALKPKF-AE--STEISELSHNFVMVNLEDEEEP-- 92 (164)
T ss_dssp -CCTTSCTTSCB---CCHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHH-HT--CHHHHHHHTTSEEEEEEGGGSC--
T ss_pred cccccccccccc---cCHHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHH-HH--HHHHhhcCCeEEEEEecCCchH--
Confidence 334455555543 689999999999999999999999999999998744 33 22222 345666555433221
Q ss_pred HHHHhcCC--CCCCeEEEEeCCCCeeEEEecCC----------CChHHHHHHHHHHHhhCCC
Q 021440 186 KVCSFYNM--DSIPAVLVIDPITGQKICSWCGM----------INPQPLGEMLLPFMDRSPR 235 (312)
Q Consensus 186 ~~~~~Y~~--~~~P~i~IIdprTGe~v~~~~G~----------~~~~~fl~~L~~fl~~~~~ 235 (312)
++..|.+ ..+|+++|+|+ .|+.+..+.|. .++++|++.|.+.++...-
T Consensus 93 -~~~~~~~~~~~~Pt~~~~d~-~G~~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~ 152 (164)
T 1sen_A 93 -KDEDFSPDGGYIPRILFLDP-SGKVHPEIINENGNPSYKYFYVSAEQVVQGMKEAQERLTG 152 (164)
T ss_dssp -SCGGGCTTCSCSSEEEEECT-TSCBCTTCCCTTSCTTSTTCCCSHHHHHHHHHHHHHHHGG
T ss_pred -HHHHhcccCCcCCeEEEECC-CCCEEEEEeCCCCccchhcccCCHHHHHHHHHHHHHhccH
Confidence 4566777 66999999996 68888777784 7889999999998876543
No 40
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=98.84 E-value=2.4e-08 Score=75.70 Aligned_cols=98 Identities=14% Similarity=0.184 Sum_probs=77.0
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEE
Q 021440 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLV 201 (312)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~I 201 (312)
..+|++++ ..+|.++|+++++||..|+.+...+ ..+.+-+.. +.|..++.+. ...++..|++..+|++.+
T Consensus 6 ~~~~~~~~----~~~~~~~v~f~~~~C~~C~~~~~~~---~~~~~~~~~-~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~ 75 (104)
T 2e0q_A 6 SKNFDSFL----ASHEIAVVDFWAEWCAPCLILAPII---EELAEDYPQ-VGFGKLNSDE--NPDIAARYGVMSLPTVIF 75 (104)
T ss_dssp TTTHHHHH----HHSSEEEEEEECTTCHHHHHHHHHH---HHHHHHCTT-SEEEEEETTT--CHHHHHHTTCCSSCEEEE
T ss_pred HHHHHHHH----hcCCcEEEEEECCCChhHHHHhHHH---HHHHHHcCC-ceEEEEECCC--CHHHHHhCCccccCEEEE
Confidence 34677776 4689999999999999999997543 233333333 7888887664 456889999999999999
Q ss_pred EeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021440 202 IDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (312)
Q Consensus 202 IdprTGe~v~~~~G~~~~~~fl~~L~~fl~ 231 (312)
+ ..|+.+..+.|..+.+++.+.|.+.+.
T Consensus 76 ~--~~g~~~~~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 76 F--KDGEPVDEIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp E--ETTEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred E--ECCeEhhhccCCCCHHHHHHHHHHHhc
Confidence 9 369999899999999998888887764
No 41
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=98.83 E-value=2.1e-08 Score=77.44 Aligned_cols=98 Identities=17% Similarity=0.186 Sum_probs=78.3
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEEE
Q 021440 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVI 202 (312)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~II 202 (312)
.+|++.. .+.+|.+||+++++||..|+.+...+ ..+.+-++.++.|..++.+. ...++..|++..+|++.++
T Consensus 10 ~~f~~~~---~~~~~~~~v~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~ 81 (108)
T 2trx_A 10 DSFDTDV---LKADGAILVDFWAEWCGPCKMIAPIL---DEIADEYQGKLTVAKLNIDQ--NPGTAPKYGIRGIPTLLLF 81 (108)
T ss_dssp TTHHHHT---TTCSSEEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTEEEEEEETTT--CTTHHHHTTCCSSSEEEEE
T ss_pred hhHHHHH---HhcCCeEEEEEECCCCHhHHHHHHHH---HHHHHHhCCCcEEEEEECCC--CHHHHHHcCCcccCEEEEE
Confidence 4455443 46789999999999999999997654 45555556679999887765 3468889999999999999
Q ss_pred eCCCCeeEEEecCCCChHHHHHHHHHHH
Q 021440 203 DPITGQKICSWCGMINPQPLGEMLLPFM 230 (312)
Q Consensus 203 dprTGe~v~~~~G~~~~~~fl~~L~~fl 230 (312)
+.|+.+..+.|..+++++.+.|.+.+
T Consensus 82 --~~G~~~~~~~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 82 --KNGEVAATKVGALSKGQLKEFLDANL 107 (108)
T ss_dssp --ETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred --eCCEEEEEEecCCCHHHHHHHHHHhh
Confidence 36999989999999998888887765
No 42
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=98.82 E-value=2e-08 Score=78.34 Aligned_cols=97 Identities=15% Similarity=0.274 Sum_probs=73.4
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhh----ccEEEEEeccCChhHHHHHHhcCCCCCCe
Q 021440 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS----VNFIFWQEYDDTSEGWKVCSFYNMDSIPA 198 (312)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~----~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~ 198 (312)
.+|++++.. +..+|++||+++++||.+|+.+... +.++.+ .++.|+.++.+. ...++..|++..+|+
T Consensus 9 ~~~~~~~~~-~~~~~~~~v~f~a~wC~~C~~~~~~------~~~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt 79 (112)
T 3d6i_A 9 EQFTYLTTT-AAGDKLIVLYFHTSWAEPCKALKQV------FEAISNEPSNSNVSFLSIDADE--NSEISELFEISAVPY 79 (112)
T ss_dssp HHHHHHHTT-TTTTCCEEEEEECCC--CHHHHHHH------HHHHHHCGGGTTSEEEEEETTT--CHHHHHHTTCCSSSE
T ss_pred HHHHHHHhc-ccCCCEEEEEEECCCCHHHHHHHHH------HHHHHHhcCCCCEEEEEEeccc--CHHHHHHcCCCcccE
Confidence 457776654 4668999999999999999999753 444444 368899887765 456889999999999
Q ss_pred EEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021440 199 VLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (312)
Q Consensus 199 i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~ 231 (312)
++++. .|+.+..+.|. .++++.+.|.+.+.
T Consensus 80 ~~~~~--~G~~~~~~~G~-~~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 80 FIIIH--KGTILKELSGA-DPKEYVSLLEDCKN 109 (112)
T ss_dssp EEEEE--TTEEEEEECSC-CHHHHHHHHHHHHH
T ss_pred EEEEE--CCEEEEEecCC-CHHHHHHHHHHHHh
Confidence 99884 69999999997 55667777777664
No 43
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=98.82 E-value=1.2e-08 Score=79.51 Aligned_cols=92 Identities=18% Similarity=0.120 Sum_probs=74.8
Q ss_pred HHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCCCCeeEEE
Q 021440 133 LAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICS 212 (312)
Q Consensus 133 k~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdprTGe~v~~ 212 (312)
.+.+|.++|+++++||..|+.+...+ ..+.+-+..++.|+.++.+. ...++..|++..+|+++++. .|+.+..
T Consensus 20 ~~~~~~~vv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~--~G~~~~~ 92 (112)
T 1t00_A 20 LKNDKPVLVDFWAAWCGPCRQIAPSL---EAIAAEYGDKIEIVKLNIDE--NPGTAAKYGVMSIPTLNVYQ--GGEVAKT 92 (112)
T ss_dssp TTCSSCEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCSSSEEEEEE--TTEEEEE
T ss_pred hhCCCeEEEEEECCCCHhHHhcCHHH---HHHHHHhcCCeEEEEEEcCC--CHHHHHhCCCCcccEEEEEe--CCEEEEE
Confidence 45689999999999999999997543 34555555568898887765 45688999999999988873 6999989
Q ss_pred ecCCCChHHHHHHHHHHHh
Q 021440 213 WCGMINPQPLGEMLLPFMD 231 (312)
Q Consensus 213 ~~G~~~~~~fl~~L~~fl~ 231 (312)
+.|..+.+++.+.|.+.|.
T Consensus 93 ~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 93 IVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp EESCCCHHHHHHHTHHHHC
T ss_pred EeCCCCHHHHHHHHHHHhh
Confidence 9999999999888887764
No 44
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=98.82 E-value=1.6e-08 Score=83.03 Aligned_cols=103 Identities=13% Similarity=0.049 Sum_probs=84.8
Q ss_pred cHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEEEe
Q 021440 124 SFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVID 203 (312)
Q Consensus 124 sf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IId 203 (312)
+-++........+|++||+++++||..|+.+...+ +.+.+-+..++.|..++.+. ...++..|++..+|+++|+.
T Consensus 12 ~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l---~~l~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~ 86 (140)
T 3hz4_A 12 EDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYF---EEYAKEYGSSAVFGRINIAT--NPWTAEKYGVQGTPTFKFFC 86 (140)
T ss_dssp CHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHH---HHHHHHHTTTSEEEEEETTT--CHHHHHHHTCCEESEEEEEE
T ss_pred chHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHH---HHHHHHhCCceEEEEEECCc--CHhHHHHCCCCcCCEEEEEe
Confidence 33444445666799999999999999999998765 66677777778898887764 45788999999999999984
Q ss_pred CCCCeeEEEecCCCChHHHHHHHHHHHhhC
Q 021440 204 PITGQKICSWCGMINPQPLGEMLLPFMDRS 233 (312)
Q Consensus 204 prTGe~v~~~~G~~~~~~fl~~L~~fl~~~ 233 (312)
.|+.+..+.|..++++|.+.|.+.+...
T Consensus 87 --~G~~~~~~~G~~~~~~l~~~l~~~l~~~ 114 (140)
T 3hz4_A 87 --HGRPVWEQVGQIYPSILKNAVRDMLQHG 114 (140)
T ss_dssp --TTEEEEEEESSCCHHHHHHHHHHHHHHH
T ss_pred --CCcEEEEEcCCCCHHHHHHHHHHHhccc
Confidence 6999999999999999999999998654
No 45
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=98.81 E-value=1.6e-08 Score=82.24 Aligned_cols=90 Identities=14% Similarity=0.134 Sum_probs=74.5
Q ss_pred cCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCCCCeeEEEec
Q 021440 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWC 214 (312)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdprTGe~v~~~~ 214 (312)
.+|.+||+++++||..|+.+...+ ..+.+-++.++.|+.++.+. ...++..|++..+|+++|+++ .|+.+ .+.
T Consensus 50 ~~k~vlv~f~a~wC~~C~~~~~~~---~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~-~g~~~-~~~ 122 (141)
T 3hxs_A 50 GDKPAIVDFYADWCGPCKMVAPIL---EELSKEYAGKIYIYKVNVDK--EPELARDFGIQSIPTIWFVPM-KGEPQ-VNM 122 (141)
T ss_dssp CSSCEEEEEECTTCTTHHHHHHHH---HHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCSSSEEEEECS-SSCCE-EEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHH---HHHHHHhcCceEEEEEECCC--CHHHHHHcCCCCcCEEEEEeC-CCCEE-EEe
Confidence 589999999999999999997655 56666666678898887764 457899999999999999996 57765 788
Q ss_pred CCCChHHHHHHHHHHHh
Q 021440 215 GMINPQPLGEMLLPFMD 231 (312)
Q Consensus 215 G~~~~~~fl~~L~~fl~ 231 (312)
|..+.++|.+.|.+.|.
T Consensus 123 G~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 123 GALSKEQLKGYIDKVLL 139 (141)
T ss_dssp SCCCHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHc
Confidence 99999998888877664
No 46
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=98.81 E-value=1.9e-08 Score=77.15 Aligned_cols=96 Identities=27% Similarity=0.328 Sum_probs=73.6
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEEE
Q 021440 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVI 202 (312)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~II 202 (312)
.+|++++..+ ++|.++|+++++||..|+.+...+ ..+.+-.. ++.|..++.+ +...++..|++..+|+++++
T Consensus 9 ~~~~~~l~~~--~~~~~~v~f~~~~C~~C~~~~~~~---~~~~~~~~-~~~~~~vd~~--~~~~~~~~~~v~~~Pt~~~~ 80 (105)
T 3m9j_A 9 TAFQEALDAA--GDKLVVVDFSATWCGPCKMIKPFF---HSLSEKYS-NVIFLEVDVD--DCQDVASESEVKSMPTFQFF 80 (105)
T ss_dssp HHHHHHHHHT--TTSCEEEEEECTTCHHHHHHHHHH---HHHHHHST-TSEEEEEETT--TCHHHHHHTTCCBSSEEEEE
T ss_pred HHHHHHHHhc--CCCeEEEEEECCCChhhHHHHHHH---HHHHHHcc-CeEEEEEEhh--hhHHHHHHcCCCcCcEEEEE
Confidence 4466665433 689999999999999999997543 22333332 4788887665 45678999999999999999
Q ss_pred eCCCCeeEEEecCCCChHHHHHHHHHH
Q 021440 203 DPITGQKICSWCGMINPQPLGEMLLPF 229 (312)
Q Consensus 203 dprTGe~v~~~~G~~~~~~fl~~L~~f 229 (312)
. .|+.+..+.|. +++++.+.|.+.
T Consensus 81 ~--~g~~~~~~~g~-~~~~l~~~l~~~ 104 (105)
T 3m9j_A 81 K--KGQKVGEFSGA-NKEKLEATINEL 104 (105)
T ss_dssp E--TTEEEEEEESS-CHHHHHHHHHHH
T ss_pred E--CCeEEEEEeCC-CHHHHHHHHHHh
Confidence 5 59999999998 888887777664
No 47
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=98.81 E-value=9.1e-09 Score=82.93 Aligned_cols=92 Identities=5% Similarity=0.118 Sum_probs=76.1
Q ss_pred HHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCCCCe
Q 021440 129 KDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQ 208 (312)
Q Consensus 129 ~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdprTGe 208 (312)
...+..++|.+||+++++||..|+.+...+ +.+.+-++.++.|..++.+. ...++..|++..+|+++++. .|+
T Consensus 35 ~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l---~~~~~~~~~~v~~~~vd~d~--~~~l~~~~~v~~~Pt~~~~~--~G~ 107 (128)
T 3ul3_B 35 INGVNMKNTVIVLYFFAKWCQACTMQSTEM---DKLQKYYGKRIYLLKVDLDK--NESLARKFSVKSLPTIILLK--NKT 107 (128)
T ss_dssp SSBTTSCCSEEEEEEECTTCHHHHHHHHHH---HHHHHHHGGGEEEEEEEGGG--CHHHHHHTTCCSSSEEEEEE--TTE
T ss_pred HHHHHccCCEEEEEEECCCCHHHHHHhHHH---HHHHHHhcCCeEEEEEECCC--CHHHHHHcCCCCcCEEEEEE--CCE
Confidence 444567899999999999999999998765 56666667789999887664 45789999999999999994 599
Q ss_pred eEEEecCCCChHHHHHHHH
Q 021440 209 KICSWCGMINPQPLGEMLL 227 (312)
Q Consensus 209 ~v~~~~G~~~~~~fl~~L~ 227 (312)
.+..+.|..+.+++.+.|.
T Consensus 108 ~~~~~~G~~~~~~l~~~l~ 126 (128)
T 3ul3_B 108 MLARKDHFVSSNDLIALIK 126 (128)
T ss_dssp EEEEESSCCCHHHHHHHHT
T ss_pred EEEEecCCCCHHHHHHHHH
Confidence 9999999999888766654
No 48
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=98.81 E-value=2.4e-08 Score=78.33 Aligned_cols=89 Identities=21% Similarity=0.305 Sum_probs=69.0
Q ss_pred HHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc--cEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCCCC
Q 021440 130 DAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITG 207 (312)
Q Consensus 130 ~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~--nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdprTG 207 (312)
+.+.+++|++||+++++||.+|+.+... +.++.++ ++.|..++.+ +...++..|++..+|++++++ .|
T Consensus 18 ~~~~~~~k~vlv~f~a~wC~~C~~~~p~------l~~l~~~~~~~~~~~vd~~--~~~~l~~~~~v~~~Pt~~~~~--~G 87 (109)
T 3f3q_A 18 DSAIAQDKLVVVDFYATWCGPCKMIAPM------IEKFSEQYPQADFYKLDVD--ELGDVAQKNEVSAMPTLLLFK--NG 87 (109)
T ss_dssp HHHTTSSSCEEEEEECTTCHHHHHHHHH------HHHHHHHCTTSEEEEEETT--TCHHHHHHTTCCSSSEEEEEE--TT
T ss_pred HHHHhcCCEEEEEEECCcCHhHHHHHHH------HHHHHHHCCCCEEEEEECC--CCHHHHHHcCCCccCEEEEEE--CC
Confidence 3455679999999999999999999754 3444433 4777777665 445688999999999999998 59
Q ss_pred eeEEEecCCCChHHHHHHHHHH
Q 021440 208 QKICSWCGMINPQPLGEMLLPF 229 (312)
Q Consensus 208 e~v~~~~G~~~~~~fl~~L~~f 229 (312)
+.+..+.|. +++++.+.|.+.
T Consensus 88 ~~~~~~~G~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 88 KEVAKVVGA-NPAAIKQAIAAN 108 (109)
T ss_dssp EEEEEEESS-CHHHHHHHHHHH
T ss_pred EEEEEEeCC-CHHHHHHHHHhh
Confidence 999999998 677766666543
No 49
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=98.81 E-value=1.2e-08 Score=83.21 Aligned_cols=95 Identities=13% Similarity=0.170 Sum_probs=77.3
Q ss_pred cCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCCCCeeEEEec
Q 021440 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWC 214 (312)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdprTGe~v~~~~ 214 (312)
.+|.+||+++++||..|+.+...+ ..+.+-++.++.|..++.+. ...++..|++..+|+++++|+ .|+.+ .+.
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~~l---~~l~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~-~G~~~-~~~ 109 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAPIL---DELAKEYDGQIVIYKVDTEK--EQELAGAFGIRSIPSILFIPM-EGKPE-MAQ 109 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHHHH---HHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCSSCEEEEECS-SSCCE-EEE
T ss_pred CCCEEEEEEECCcCHHHHHHHHHH---HHHHHHhcCCEEEEEEeCCC--CHHHHHHcCCCCCCEEEEECC-CCcEE-EEe
Confidence 579999999999999999997654 45555566678899887764 457889999999999999986 58876 678
Q ss_pred CCCChHHHHHHHHHHHhhCCCC
Q 021440 215 GMINPQPLGEMLLPFMDRSPRK 236 (312)
Q Consensus 215 G~~~~~~fl~~L~~fl~~~~~~ 236 (312)
|..+++++.+.|.+.+.....+
T Consensus 110 G~~~~~~l~~~l~~~~~~~~~~ 131 (136)
T 2l5l_A 110 GAMPKASFKKAIDEFLLKKEGH 131 (136)
T ss_dssp SCCCHHHHHHHHHHHHTSCTTS
T ss_pred CCCCHHHHHHHHHHHhhccCCC
Confidence 9999999988888887665443
No 50
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=98.80 E-value=1.1e-08 Score=82.58 Aligned_cols=98 Identities=13% Similarity=0.039 Sum_probs=76.6
Q ss_pred HHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCC-------------------------hhHH
Q 021440 131 AALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDT-------------------------SEGW 185 (312)
Q Consensus 131 ~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds-------------------------~EG~ 185 (312)
.+.-++|++||++.++||..|+.+...+ ..+.+-+.+++.|+.++.+. ....
T Consensus 24 ~~~~~gk~~lv~f~~~~C~~C~~~~~~l---~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 100 (148)
T 2b5x_A 24 EQLIGEKPTLIHFWSISCHLCKEAMPQV---NEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDH 100 (148)
T ss_dssp HHHTTTSCEEEEEECTTCHHHHHHHHHH---HHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECSSC
T ss_pred hhhcCCCEEEEEEEcCCCHHHHHHhHHH---HHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEECCch
Confidence 3445789999999999999999986543 23444444447777777653 2234
Q ss_pred HHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021440 186 KVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (312)
Q Consensus 186 ~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~ 232 (312)
.++..|++..+|++.|||+ .|+.+..+.|..+++++.+.|.+.|..
T Consensus 101 ~~~~~~~v~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~l~~~l~~ 146 (148)
T 2b5x_A 101 ALTDAFENEYVPAYYVFDK-TGQLRHFQAGGSGMKMLEKRVNRVLAE 146 (148)
T ss_dssp HHHHHTCCCCSSEEEEECT-TCBEEEEEESCSTTHHHHHHHHHHHTT
T ss_pred hHHHHhCCCCCCEEEEECC-CCcEEEEecCCCCHHHHHHHHHHHHhc
Confidence 6888999999999999997 699999999999999999999988865
No 51
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=98.79 E-value=1.5e-08 Score=77.50 Aligned_cols=98 Identities=16% Similarity=0.246 Sum_probs=77.5
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEEE
Q 021440 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVI 202 (312)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~II 202 (312)
.+|+++. .+.+|.++|+++++||..|+.+...+ ..+.+-++.++.|..++.+. ...++..|++..+|+++++
T Consensus 8 ~~~~~~~---~~~~~~~~v~f~~~~C~~C~~~~~~~---~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~ 79 (105)
T 1fb6_A 8 SSWKEFV---LESEVPVMVDFWAPWCGPCKLIAPVI---DELAKEYSGKIAVYKLNTDE--APGIATQYNIRSIPTVLFF 79 (105)
T ss_dssp TTHHHHT---TTCSSCEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCSSSEEEEE
T ss_pred hhHHHHH---hcCCCcEEEEEECCCChHHHHHHHHH---HHHHHHhcCceEEEEEcCcc--hHHHHHhCCCCcccEEEEE
Confidence 3455543 34689999999999999999998765 45666666678888887664 4578899999999998887
Q ss_pred eCCCCeeEEEecCCCChHHHHHHHHHHH
Q 021440 203 DPITGQKICSWCGMINPQPLGEMLLPFM 230 (312)
Q Consensus 203 dprTGe~v~~~~G~~~~~~fl~~L~~fl 230 (312)
. .|+.+..+.|..+++++.+.|.++|
T Consensus 80 ~--~g~~~~~~~G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 80 K--NGERKESIIGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp E--TTEEEEEEEECCCHHHHHHHHHHHC
T ss_pred e--CCeEEEEEecCCCHHHHHHHHHhhC
Confidence 4 6999988999999998888877653
No 52
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=98.79 E-value=1.7e-08 Score=81.95 Aligned_cols=99 Identities=17% Similarity=0.196 Sum_probs=79.2
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEE
Q 021440 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLV 201 (312)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~I 201 (312)
..+|++.. .+.+|.+||+++++||..|+.+...+ ..+.+.++.++.|+.++.+.. ..++..|++..+|++++
T Consensus 29 ~~~f~~~~---~~~~k~vlv~F~a~wC~~C~~~~p~l---~~l~~~~~~~v~~~~vd~~~~--~~l~~~~~v~~~Pt~~~ 100 (128)
T 2o8v_B 29 DDSFDTDV---LKADGAILVDFWAEWCGPAKMIAPIL---DEIADEYQGKLTVAKLNIDQN--PGTAPKYGIRGIPTLLL 100 (128)
T ss_dssp TTTHHHHT---TTCSSEEEEEEECSSCHHHHHTHHHH---HHHHHHTTTTEEEEEEETTTC--CTTSGGGTCCSSSEEEE
T ss_pred hhhHHHHH---HhcCCEEEEEEECCCCHHHHHHhHHH---HHHHHHhcCCeEEEEEECCCC--HHHHHHcCCCccCEEEE
Confidence 34555443 46789999999999999999997654 455555666799998877653 46888999999999999
Q ss_pred EeCCCCeeEEEecCCCChHHHHHHHHHHH
Q 021440 202 IDPITGQKICSWCGMINPQPLGEMLLPFM 230 (312)
Q Consensus 202 IdprTGe~v~~~~G~~~~~~fl~~L~~fl 230 (312)
+ ..|+.+..+.|..+.+++.+.|.+.|
T Consensus 101 ~--~~G~~~~~~~G~~~~~~l~~~l~~~l 127 (128)
T 2o8v_B 101 F--KNGEVAATKVGALSKGQLKEFLDANL 127 (128)
T ss_dssp E--ETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred E--eCCEEEEEEcCCCCHHHHHHHHHHhh
Confidence 9 36999988999999998888887765
No 53
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.78 E-value=4.1e-08 Score=79.52 Aligned_cols=100 Identities=11% Similarity=0.171 Sum_probs=78.5
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhcc---EEEEEeccCChhHHHHHHhcCCCCCCe
Q 021440 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVN---FIFWQEYDDTSEGWKVCSFYNMDSIPA 198 (312)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~n---FIfwq~~~ds~EG~~~~~~Y~~~~~P~ 198 (312)
..+|++++ +++|.+||+++++||..|+.+...+ ..+.+.++.. ++|..++.+. ...++..|++..+|+
T Consensus 24 ~~~~~~~~----~~~~~vlv~f~a~wC~~C~~~~p~~---~~~~~~~~~~~~~v~~~~vd~~~--~~~~~~~~~v~~~Pt 94 (140)
T 2dj1_A 24 DGNFDNFV----ADKDTVLLEFYAPWCGHCKQFAPEY---EKIASTLKDNDPPIAVAKIDATS--ASMLASKFDVSGYPT 94 (140)
T ss_dssp TTTHHHHH----TTCSEEEEEECCTTCHHHHTTHHHH---HHHHHHHHSSSSCCEEEEECTTT--CHHHHHHTTCCSSSE
T ss_pred hHhHHHHH----hcCCeEEEEEECCCCHHHHHhhHHH---HHHHHHHhccCCceEEEEEeCcc--cHHHHHHCCCCccCe
Confidence 45566655 4689999999999999999997654 3444445443 8888887654 467889999999999
Q ss_pred EEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhC
Q 021440 199 VLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRS 233 (312)
Q Consensus 199 i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~~ 233 (312)
++|+. .|+ +..+.|..+.++|.+.|.+.+...
T Consensus 95 ~~~~~--~G~-~~~~~g~~~~~~l~~~l~~~~~~~ 126 (140)
T 2dj1_A 95 IKILK--KGQ-AVDYDGSRTQEEIVAKVREVSQPD 126 (140)
T ss_dssp EEEEE--TTE-EEECCSCCCHHHHHHHHHHHHSSS
T ss_pred EEEEE--CCc-EEEcCCCCCHHHHHHHHHHhcCCC
Confidence 99994 588 778899999999988888887654
No 54
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=98.78 E-value=3.2e-08 Score=80.23 Aligned_cols=97 Identities=14% Similarity=0.167 Sum_probs=75.5
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEEE
Q 021440 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVI 202 (312)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~II 202 (312)
.+|++++ ..+|++||+++++||..|+.+...+ ..+.+-. .++.|+.++.+. ...++..|++..+|+++|+
T Consensus 28 ~~f~~~~----~~~k~vvv~F~a~wC~~C~~~~p~l---~~l~~~~-~~v~~~~vd~d~--~~~l~~~~~v~~~Pt~~i~ 97 (125)
T 1r26_A 28 EQFRNIM----SEDILTVAWFTAVWCGPCKTIERPM---EKIAYEF-PTVKFAKVDADN--NSEIVSKCRVLQLPTFIIA 97 (125)
T ss_dssp HHHHHHH----HSSSCEEEEEECTTCHHHHHTHHHH---HHHHHHC-TTSEEEEEETTT--CHHHHHHTTCCSSSEEEEE
T ss_pred HHHHHHH----ccCCEEEEEEECCcCHhHHHHHHHH---HHHHHHC-CCCEEEEEECCC--CHHHHHHcCCCcccEEEEE
Confidence 4466665 6899999999999999999997543 2232222 368999887764 4568899999999998887
Q ss_pred eCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021440 203 DPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (312)
Q Consensus 203 dprTGe~v~~~~G~~~~~~fl~~L~~fl~~ 232 (312)
+.|+.+..+.| .+++++.+.|.+++..
T Consensus 98 --~~G~~~~~~~G-~~~~~l~~~l~~~l~~ 124 (125)
T 1r26_A 98 --RSGKMLGHVIG-ANPGMLRQKLRDIIKD 124 (125)
T ss_dssp --ETTEEEEEEES-SCHHHHHHHHHHHHHC
T ss_pred --eCCeEEEEEeC-CCHHHHHHHHHHHhcC
Confidence 36999988999 6888888888887754
No 55
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=98.78 E-value=4.1e-08 Score=75.16 Aligned_cols=96 Identities=17% Similarity=0.253 Sum_probs=74.1
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEEE
Q 021440 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVI 202 (312)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~II 202 (312)
.+|++++.. .++|+++|+++++||..|+.+...+ ..+.+-++.++.|+.++.+. ...++..|++..+|+++++
T Consensus 9 ~~~~~~l~~--~~~~~~vv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~ 81 (106)
T 1xwb_A 9 ADLDGQLTK--ASGKLVVLDFFATWCGPCKMISPKL---VELSTQFADNVVVLKVDVDE--CEDIAMEYNISSMPTFVFL 81 (106)
T ss_dssp HHHHHHHHH--HTTSEEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTEEEEEEETTT--CHHHHHHTTCCSSSEEEEE
T ss_pred HHHHHHHHh--cCCCEEEEEEECCcCHHHHHhhHHH---HHHHHHhCCCeEEEEEeccc--hHHHHHHcCCCcccEEEEE
Confidence 456666643 4789999999999999999997654 34555555678999887764 4568899999999998877
Q ss_pred eCCCCeeEEEecCCCChHHHHHHHHH
Q 021440 203 DPITGQKICSWCGMINPQPLGEMLLP 228 (312)
Q Consensus 203 dprTGe~v~~~~G~~~~~~fl~~L~~ 228 (312)
. .|+.+..+.| .+++++.+.|.+
T Consensus 82 ~--~G~~~~~~~g-~~~~~l~~~i~~ 104 (106)
T 1xwb_A 82 K--NGVKVEEFAG-ANAKRLEDVIKA 104 (106)
T ss_dssp E--TTEEEEEEES-CCHHHHHHHHHH
T ss_pred c--CCcEEEEEcC-CCHHHHHHHHHH
Confidence 4 6999988999 678776666554
No 56
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=98.76 E-value=5.1e-08 Score=77.76 Aligned_cols=102 Identities=17% Similarity=0.177 Sum_probs=77.7
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEE
Q 021440 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVL 200 (312)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~ 200 (312)
..|+.++..+..++.+|++||+++++||..|+.+...+ ..+.+-+ .++.|..++.+. ...++..|++..+|+++
T Consensus 8 ~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l---~~l~~~~-~~v~~~~vd~~~--~~~~~~~~~i~~~Pt~~ 81 (118)
T 2f51_A 8 FNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQIL---PSIAEAN-KDVTFIKVDVDK--NGNAADAYGVSSIPALF 81 (118)
T ss_dssp ECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHH---HHHHHHC-TTSEEEEEETTT--CHHHHHHTTCCSSSEEE
T ss_pred ecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHH---HHHHHHC-CCeEEEEEECCC--CHHHHHhcCCCCCCEEE
Confidence 46777777767777899999999999999999997655 3444444 578999887764 35688999999999999
Q ss_pred EEeC--CCCeeEEEecCCCChHHHHHHHHHH
Q 021440 201 VIDP--ITGQKICSWCGMINPQPLGEMLLPF 229 (312)
Q Consensus 201 IIdp--rTGe~v~~~~G~~~~~~fl~~L~~f 229 (312)
+++. ..|+.+..+.|..+ +++.+.+.++
T Consensus 82 ~~~~~~~~G~~~~~~~G~~~-~~l~~~~~~~ 111 (118)
T 2f51_A 82 FVKKEGNEIKTLDQFVGADV-SRIKADIEKF 111 (118)
T ss_dssp EEEEETTEEEEEEEEESCCH-HHHHHHHHHH
T ss_pred EEeCCCCcceEEEeecCCCH-HHHHHHHHHh
Confidence 9974 13788888999764 4455555544
No 57
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=98.76 E-value=1.9e-08 Score=77.96 Aligned_cols=87 Identities=14% Similarity=0.133 Sum_probs=64.4
Q ss_pred HcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc--cEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCCCCeeEE
Q 021440 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKIC 211 (312)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~--nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdprTGe~v~ 211 (312)
+++|.+||+++++||.+|+.+.. .+.++.++ ++.|..++.+.. ..++..|++..+|+++++. .|+.+.
T Consensus 16 ~~~~~vlv~f~a~wC~~C~~~~p------~~~~~~~~~~~~~~~~vd~~~~--~~l~~~~~v~~~Pt~~~~~--~G~~~~ 85 (105)
T 4euy_A 16 EEQQLVLLFIKTENCGVCDVMLR------KVNYVLENYNYVEKIEILLQDM--QEIAGRYAVFTGPTVLLFY--NGKEIL 85 (105)
T ss_dssp TCSSEEEEEEEESSCHHHHHHHH------HHHHHHHTCTTEEEEEEEECCC-----------CCCCEEEEEE--TTEEEE
T ss_pred hcCCCEEEEEeCCCCcchHHHHH------HHHHHHHHcCCceEEEEECCCC--HHHHHhcCCCCCCEEEEEe--CCeEEE
Confidence 57899999999999999999964 44555543 688888877643 4688999999999999996 699998
Q ss_pred EecCCCChHHHHHHHHHHH
Q 021440 212 SWCGMINPQPLGEMLLPFM 230 (312)
Q Consensus 212 ~~~G~~~~~~fl~~L~~fl 230 (312)
.+.|..+.+++.+.|.+++
T Consensus 86 ~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 86 RESRFISLENLERTIQLFE 104 (105)
T ss_dssp EEESSCCHHHHHHHHHTTC
T ss_pred EEeCCcCHHHHHHHHHHhh
Confidence 9999999999888877654
No 58
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=98.75 E-value=8.4e-08 Score=74.00 Aligned_cols=93 Identities=13% Similarity=0.203 Sum_probs=75.6
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc------cEEEEEeccCChhHHHHHHhcCCC
Q 021440 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV------NFIFWQEYDDTSEGWKVCSFYNMD 194 (312)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~------nFIfwq~~~ds~EG~~~~~~Y~~~ 194 (312)
-..+|++++. +|.+||+++++||..|+.+. +.+.++.++ ++.|..++.+. ...++..|++.
T Consensus 11 ~~~~~~~~~~-----~~~~lv~f~~~~C~~C~~~~------~~~~~~~~~~~~~~~~~~~~~vd~~~--~~~l~~~~~v~ 77 (111)
T 3uvt_A 11 TENNFDDTIA-----EGITFIKFYAPWCGHCKTLA------PTWEELSKKEFPGLAGVKIAEVDCTA--ERNICSKYSVR 77 (111)
T ss_dssp CTTTHHHHHH-----SSEEEEEEECSSCHHHHHHH------HHHHHHHTCCCCC-CCEEEEEEETTT--CHHHHHHTTCC
T ss_pred ChhhHHHHhc-----CCcEEEEEECCCChhHHHhh------HHHHHHHHHhhccCCceEEEEEeccc--cHhHHHhcCCC
Confidence 4567887775 78999999999999999995 556666654 57888887664 45689999999
Q ss_pred CCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHH
Q 021440 195 SIPAVLVIDPITGQKICSWCGMINPQPLGEMLLP 228 (312)
Q Consensus 195 ~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~ 228 (312)
.+|+++++. .|+.+..+.|..+.+++.+.|.+
T Consensus 78 ~~Pt~~~~~--~g~~~~~~~g~~~~~~l~~~l~~ 109 (111)
T 3uvt_A 78 GYPTLLLFR--GGKKVSEHSGGRDLDSLHRFVLS 109 (111)
T ss_dssp SSSEEEEEE--TTEEEEEECSCCSHHHHHHHHHH
T ss_pred cccEEEEEe--CCcEEEeccCCcCHHHHHHHHHh
Confidence 999999994 59999899999999887776654
No 59
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=98.75 E-value=3.1e-08 Score=77.64 Aligned_cols=96 Identities=17% Similarity=0.209 Sum_probs=73.1
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEE
Q 021440 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVL 200 (312)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~ 200 (312)
-..+|++++ +++|.+||+++++||..|+.+...+ ..+.+-.. ++.|+.++.+. ...++..|++..+|+++
T Consensus 15 ~~~~f~~~~----~~~k~vlv~f~a~~C~~C~~~~~~l---~~l~~~~~-~v~~~~vd~~~--~~~~~~~~~v~~~Pt~~ 84 (112)
T 1syr_A 15 SQAEFDSII----SQNELVIVDFFAEWCGPCKRIAPFY---EECSKTYT-KMVFIKVDVDE--VSEVTEKENITSMPTFK 84 (112)
T ss_dssp SHHHHHHHH----HHCSEEEEEEECTTCHHHHHHHHHH---HHHHHHCT-TSEEEEEETTT--THHHHHHTTCCSSSEEE
T ss_pred CHHHHHHHH----ccCCeEEEEEECCCCHHHHHHHHHH---HHHHHHcC-CCEEEEEECCC--CHHHHHHcCCCcccEEE
Confidence 345677766 3789999999999999999997554 23333322 58888887764 45788999999999988
Q ss_pred EEeCCCCeeEEEecCCCChHHHHHHHHHH
Q 021440 201 VIDPITGQKICSWCGMINPQPLGEMLLPF 229 (312)
Q Consensus 201 IIdprTGe~v~~~~G~~~~~~fl~~L~~f 229 (312)
|+. .|+.+..+.|. +++++.+.|.+.
T Consensus 85 ~~~--~G~~~~~~~G~-~~~~l~~~l~~~ 110 (112)
T 1syr_A 85 VYK--NGSSVDTLLGA-NDSALKQLIEKY 110 (112)
T ss_dssp EEE--TTEEEEEEESC-CHHHHHHHHHTT
T ss_pred EEE--CCcEEEEEeCC-CHHHHHHHHHHh
Confidence 774 69999889998 888777666543
No 60
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=98.74 E-value=1e-08 Score=80.72 Aligned_cols=91 Identities=19% Similarity=0.155 Sum_probs=73.0
Q ss_pred HHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCCCCeeE
Q 021440 131 AALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKI 210 (312)
Q Consensus 131 ~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdprTGe~v 210 (312)
.+.+.+|.+||+++++||..|+.+...+ +.+.+-++.++.|..++.+. ...++..|++..+|+++|+. .|+.+
T Consensus 25 ~~~~~~~~~lv~f~~~~C~~C~~~~~~~---~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~i~~~Pt~~~~~--~g~~~ 97 (121)
T 2i1u_A 25 DVLSSNKPVLVDFWATWCGPCKMVAPVL---EEIATERATDLTVAKLDVDT--NPETARNFQVVSIPTLILFK--DGQPV 97 (121)
T ss_dssp HTTTCSSCEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCSSSEEEEEE--TTEEE
T ss_pred HHHhCCCcEEEEEECCCCHHHHHHHHHH---HHHHHHhcCCeEEEEEECCC--CHHHHHhcCCCcCCEEEEEE--CCEEE
Confidence 3446789999999999999999997754 45555566678898887764 45688999999999998885 69998
Q ss_pred EEecCCCChHHHHHHHHH
Q 021440 211 CSWCGMINPQPLGEMLLP 228 (312)
Q Consensus 211 ~~~~G~~~~~~fl~~L~~ 228 (312)
..+.|..+.+++.+.|.+
T Consensus 98 ~~~~G~~~~~~l~~~l~~ 115 (121)
T 2i1u_A 98 KRIVGAKGKAALLRELSD 115 (121)
T ss_dssp EEEESCCCHHHHHHHTCS
T ss_pred EEecCCCCHHHHHHHHHH
Confidence 889999888876665543
No 61
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=98.73 E-value=4.6e-08 Score=82.29 Aligned_cols=91 Identities=13% Similarity=0.093 Sum_probs=76.4
Q ss_pred HcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCCCCeeEEEe
Q 021440 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSW 213 (312)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdprTGe~v~~~ 213 (312)
+.+|.+||+++++||.+|+.+...+ +.+.+-+..++.|..++.+. ...++..|++..+|++.++. .|+.+..+
T Consensus 62 ~~~~~vlv~F~a~wC~~C~~~~p~l---~~la~~~~~~v~~~~vd~~~--~~~l~~~~~i~~~Pt~~~~~--~G~~~~~~ 134 (155)
T 2ppt_A 62 RDDLPLLVDFWAPWCGPCRQMAPQF---QAAAATLAGQVRLAKIDTQA--HPAVAGRHRIQGIPAFILFH--KGRELARA 134 (155)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHH---HHHHHHHTTTCEEEEEETTT--STHHHHHTTCCSSSEEEEEE--TTEEEEEE
T ss_pred hCCCcEEEEEECCCCHHHHHHHHHH---HHHHHHccCCEEEEEEeCCc--cHHHHHHcCCCcCCEEEEEe--CCeEEEEe
Confidence 7789999999999999999997654 45555566678899887764 34688999999999999994 69999999
Q ss_pred cCCCChHHHHHHHHHHHh
Q 021440 214 CGMINPQPLGEMLLPFMD 231 (312)
Q Consensus 214 ~G~~~~~~fl~~L~~fl~ 231 (312)
.|..+.+++.+.|.+.+.
T Consensus 135 ~G~~~~~~l~~~l~~~l~ 152 (155)
T 2ppt_A 135 AGARPASELVGFVRGKLG 152 (155)
T ss_dssp ESCCCHHHHHHHHHHHHC
T ss_pred cCCCCHHHHHHHHHHHhc
Confidence 999999998888888764
No 62
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=98.73 E-value=8.3e-08 Score=74.29 Aligned_cols=99 Identities=12% Similarity=0.119 Sum_probs=73.3
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEE
Q 021440 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVL 200 (312)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~ 200 (312)
...+|++++.. .++|.+||+++++||.+|+.+...+ ..+.+-. .++.|..++.+. ...++..|++..+|++.
T Consensus 8 ~~~~~~~~~~~--~~~~~v~v~f~a~wC~~C~~~~~~~---~~~~~~~-~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~ 79 (107)
T 1gh2_A 8 SDPDFQPELSG--AGSRLAVVKFTMRGCGPCLRIAPAF---SSMSNKY-PQAVFLEVDVHQ--CQGTAATNNISATPTFQ 79 (107)
T ss_dssp SGGGHHHHHHH--TTTSCEEEEEECSSCHHHHHHHHHH---HHHHHHC-TTSEEEEEETTT--SHHHHHHTTCCSSSEEE
T ss_pred CHHHHHHHHHh--CCCCEEEEEEECCCChhhHHHHHHH---HHHHHHC-CCcEEEEEECcc--CHHHHHhcCCCcccEEE
Confidence 34567777654 5789999999999999999997543 2222222 368898887764 45688999999999999
Q ss_pred EEeCCCCeeEEEecCCCChHHHHHHHHHHH
Q 021440 201 VIDPITGQKICSWCGMINPQPLGEMLLPFM 230 (312)
Q Consensus 201 IIdprTGe~v~~~~G~~~~~~fl~~L~~fl 230 (312)
++. .|+.+..+.|. .++++.+.|.+.+
T Consensus 80 ~~~--~G~~~~~~~G~-~~~~l~~~l~~~l 106 (107)
T 1gh2_A 80 FFR--NKVRIDQYQGA-DAVGLEEKIKQHL 106 (107)
T ss_dssp EEE--TTEEEEEEESS-CHHHHHHHHHHHH
T ss_pred EEE--CCeEEEEEeCC-CHHHHHHHHHHhc
Confidence 984 69999889995 4555666665544
No 63
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=98.73 E-value=6.1e-09 Score=83.12 Aligned_cols=104 Identities=13% Similarity=0.176 Sum_probs=82.2
Q ss_pred cccccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc--cEEEEEeccCChhHHHHHHhcCCCC
Q 021440 118 HVMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDS 195 (312)
Q Consensus 118 ~l~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~--nFIfwq~~~ds~EG~~~~~~Y~~~~ 195 (312)
.|--..+|++++..|+..+|++||+++++||..|+.+... +.++.++ ++.|+.++.+. ...++..|++..
T Consensus 18 ~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~------l~~~~~~~~~v~~~~v~~~~--~~~~~~~~~v~~ 89 (130)
T 1wmj_A 18 ACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPV------FAEYAKKFPGAVFLKVDVDE--LKEVAEKYNVEA 89 (130)
T ss_dssp CCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHH------HHHHHHHCTTBCCEECCTTT--SGGGHHHHTCCS
T ss_pred EcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHH------HHHHHHHCCCCEEEEEeccc--hHHHHHHcCCCc
Confidence 3334567999999999999999999999999999999753 4455444 57787776653 456889999999
Q ss_pred CCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021440 196 IPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (312)
Q Consensus 196 ~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~ 232 (312)
+|+++|+ +.|+.+..+.| .+++++.+.|.+++..
T Consensus 90 ~Pt~~~~--~~g~~~~~~~g-~~~~~l~~~l~~~~~~ 123 (130)
T 1wmj_A 90 MPTFLFI--KDGAEADKVVG-ARKDDLQNTIVKHVGA 123 (130)
T ss_dssp SCCCCBC--TTTTCCBCCCT-TCTTTHHHHHHHHTSS
T ss_pred cceEEEE--eCCeEEEEEeC-CCHHHHHHHHHHHHhc
Confidence 9998877 36888888888 4788888888777654
No 64
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=98.72 E-value=2.8e-08 Score=78.60 Aligned_cols=102 Identities=8% Similarity=0.033 Sum_probs=78.9
Q ss_pred HHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCC
Q 021440 126 EKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPI 205 (312)
Q Consensus 126 ~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdpr 205 (312)
++......+.+|.+||+++++||..|+.+...+ ..+.+.+..++.|..++.+. ...++..|++..+|++.+++.
T Consensus 11 ~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~---~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~~~- 84 (122)
T 3aps_A 11 QTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEF---ELLARMIKGKVRAGKVDCQA--YPQTCQKAGIKAYPSVKLYQY- 84 (122)
T ss_dssp HHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHH---HHHHHHHTTTCEEEEEETTT--CHHHHHHTTCCSSSEEEEEEE-
T ss_pred HHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHH---HHHHHHhcCCeEEEEEeCcC--CHHHHHHcCCCccceEEEEeC-
Confidence 344344557799999999999999999998654 45666666689999887765 346889999999999999985
Q ss_pred CCeeEEEecCC----CChHHHHHHHHHHHhhCC
Q 021440 206 TGQKICSWCGM----INPQPLGEMLLPFMDRSP 234 (312)
Q Consensus 206 TGe~v~~~~G~----~~~~~fl~~L~~fl~~~~ 234 (312)
|..+..+.|. .+++++.+.|.+.+...+
T Consensus 85 -~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~ 116 (122)
T 3aps_A 85 -ERAKKSIWEEQINSRDAKTIAALIYGKLETLQ 116 (122)
T ss_dssp -EGGGTEEEEEEECCSCHHHHHHHHHHHHHCC-
T ss_pred -CCccceeeccccCcCCHHHHHHHHHHHHHhhh
Confidence 3335556665 799999999998887543
No 65
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=98.71 E-value=7.4e-08 Score=75.91 Aligned_cols=94 Identities=18% Similarity=0.276 Sum_probs=73.6
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc-cEEEEEeccCChhHHHHHHhcCCCCCCeEEE
Q 021440 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV-NFIFWQEYDDTSEGWKVCSFYNMDSIPAVLV 201 (312)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~-nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~I 201 (312)
.+|++++.. ..+|+++|+++++||..|+.+.. .+.++.++ ++.|..++.+. ...+++.|++..+|+++|
T Consensus 22 ~~~~~~l~~--~~~~~~vv~f~a~wC~~C~~~~~------~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~ 91 (117)
T 2xc2_A 22 GDLESLLEQ--HKNKLVVVDFFATWCGPCKTIAP------LFKELSEKYDAIFVKVDVDK--LEETARKYNISAMPTFIA 91 (117)
T ss_dssp THHHHHHHH--TTTSCEEEEEECTTCHHHHHHHH------HHHHHHTTSSSEEEEEETTT--SHHHHHHTTCCSSSEEEE
T ss_pred HHHHHHHHh--CCCCEEEEEEECCCCHhHHHHhH------HHHHHHHHcCcEEEEEECCc--cHHHHHHcCCCccceEEE
Confidence 667777653 47899999999999999999964 45555555 67888877654 457889999999999888
Q ss_pred EeCCCCeeEEEecCCCChHHHHHHHHHH
Q 021440 202 IDPITGQKICSWCGMINPQPLGEMLLPF 229 (312)
Q Consensus 202 IdprTGe~v~~~~G~~~~~~fl~~L~~f 229 (312)
+. .|+.+..+.| .+++++.+.|.+.
T Consensus 92 ~~--~G~~~~~~~G-~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 92 IK--NGEKVGDVVG-ASIAKVEDMIKKF 116 (117)
T ss_dssp EE--TTEEEEEEES-SCHHHHHHHHHHH
T ss_pred Ee--CCcEEEEEeC-CCHHHHHHHHHHh
Confidence 74 6999988999 5787776666654
No 66
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=98.70 E-value=8.4e-08 Score=84.03 Aligned_cols=111 Identities=12% Similarity=0.155 Sum_probs=86.5
Q ss_pred hcCCCcccc--ccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHH
Q 021440 112 LYRPPFHVM--FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCS 189 (312)
Q Consensus 112 lfrPP~~l~--~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~ 189 (312)
+|.+...+. -..+|+.++ ..+|++||+++++||..|+.+...+ ..+.+-++.++.|..++.+. ...++.
T Consensus 92 ~~~~~~~v~~l~~~~f~~~~----~~~~~vlv~F~a~wC~~C~~~~p~~---~~l~~~~~~~v~~~~vd~~~--~~~l~~ 162 (210)
T 3apq_A 92 IYDDDPEIITLERREFDAAV----NSGELWFVNFYSPGCSHCHDLAPTW---REFAKEVDGLLRIGAVNCGD--DRMLCR 162 (210)
T ss_dssp TTTTCTTSEECCHHHHHHHH----HHSCCEEEEEECTTCHHHHHHHHHH---HHHHHHTBTTBEEEEEETTT--CHHHHH
T ss_pred ccCCCCceEEecHHHHHHHH----ccCCcEEEEEeCCCChhHHHHHHHH---HHHHHHhcCceEEEEEECCc--cHHHHH
Confidence 444444442 234566655 6789999999999999999997644 45655666678999887764 457899
Q ss_pred hcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhC
Q 021440 190 FYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRS 233 (312)
Q Consensus 190 ~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~~ 233 (312)
.|++..+|+++|+ ..|+.+..+.|..+.+++.+.|.+.+...
T Consensus 163 ~~~v~~~Pt~~~~--~~G~~~~~~~G~~~~~~l~~~i~~~l~~~ 204 (210)
T 3apq_A 163 MKGVNSYPSLFIF--RSGMAAVKYNGDRSKESLVAFAMQHVRST 204 (210)
T ss_dssp HTTCCSSSEEEEE--CTTSCCEECCSCCCHHHHHHHHHHHHHCC
T ss_pred HcCCCcCCeEEEE--ECCCceeEecCCCCHHHHHHHHHHhCccc
Confidence 9999999999999 46998888999999999999998887654
No 67
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=98.70 E-value=6.5e-08 Score=78.91 Aligned_cols=100 Identities=15% Similarity=0.233 Sum_probs=74.8
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEE
Q 021440 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLV 201 (312)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~I 201 (312)
..+|.+++. +.++ +||+++++||..|+.+...+ ..+.+-+..++.|+.++.+. ...++..|++..+|+++|
T Consensus 40 ~~~~~~~~~---~~~~-vvv~f~~~~C~~C~~~~~~l---~~l~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~ 110 (140)
T 1v98_A 40 EKGFAQEVA---GAPL-TLVDFFAPWCGPCRLVSPIL---EELARDHAGRLKVVKVNVDE--HPGLAARYGVRSVPTLVL 110 (140)
T ss_dssp ------------CCCE-EEEEEECTTCHHHHHHHHHH---HHHHHHTTTTEEEEEEETTT--CHHHHHHTTCCSSSEEEE
T ss_pred HHHHHHHHH---cCCC-EEEEEECCCCHHHHHHHHHH---HHHHHHccCceEEEEEECCC--CHHHHHHCCCCccCEEEE
Confidence 344554443 4456 99999999999999998654 45555556679999887765 457889999999999999
Q ss_pred EeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021440 202 IDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (312)
Q Consensus 202 IdprTGe~v~~~~G~~~~~~fl~~L~~fl~~ 232 (312)
+. .|+.+..+.|..+.++|.+.|.+.++.
T Consensus 111 ~~--~G~~~~~~~G~~~~~~l~~~i~~~l~~ 139 (140)
T 1v98_A 111 FR--RGAPVATWVGASPRRVLEERLRPYLEG 139 (140)
T ss_dssp EE--TTEEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred Ee--CCcEEEEEeCCCCHHHHHHHHHHHHcc
Confidence 94 699998999999999998888887753
No 68
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=98.70 E-value=8e-08 Score=76.25 Aligned_cols=91 Identities=15% Similarity=0.166 Sum_probs=68.2
Q ss_pred HHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc--cEEEEEeccCChhHHHHHHhcCCCCCCeEEEEe
Q 021440 126 EKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVID 203 (312)
Q Consensus 126 ~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~--nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IId 203 (312)
.+.++.+.+++|.+||+++++||..|+.+... +.++.++ ++.|..++.+. ...++..|++..+|+++|+
T Consensus 20 ~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~------l~~~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~- 90 (114)
T 2oe3_A 20 LTEFRNLIKQNDKLVIDFYATWCGPCKMMQPH------LTKLIQAYPDVRFVKCDVDE--SPDIAKECEVTAMPTFVLG- 90 (114)
T ss_dssp HHHHHHHHHHCSEEEEEEECTTCHHHHHTHHH------HHHHHHHCTTSEEEEEETTT--CHHHHHHTTCCSBSEEEEE-
T ss_pred HHHHHHHHhCCCEEEEEEECCCCHHHHHHHHH------HHHHHHHCCCCEEEEEECCC--CHHHHHHCCCCcccEEEEE-
Confidence 34444556689999999999999999999754 3444332 37788887664 4568899999999998876
Q ss_pred CCCCeeEEEecCCCChHHHHHHHH
Q 021440 204 PITGQKICSWCGMINPQPLGEMLL 227 (312)
Q Consensus 204 prTGe~v~~~~G~~~~~~fl~~L~ 227 (312)
+.|+.+..+.|.. ++++.+.|.
T Consensus 91 -~~G~~~~~~~G~~-~~~l~~~l~ 112 (114)
T 2oe3_A 91 -KDGQLIGKIIGAN-PTALEKGIK 112 (114)
T ss_dssp -ETTEEEEEEESSC-HHHHHHHHH
T ss_pred -eCCeEEEEEeCCC-HHHHHHHHH
Confidence 3699998899987 666555443
No 69
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.69 E-value=7.5e-08 Score=87.66 Aligned_cols=102 Identities=15% Similarity=0.212 Sum_probs=81.3
Q ss_pred cccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeE
Q 021440 120 MFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAV 199 (312)
Q Consensus 120 ~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i 199 (312)
+-..+|++.+ ....+|++||+|+.+||.+|+.+...+ +.+.+-...+++|..++.+. ...++..|++..+|++
T Consensus 12 ~~~~~f~~~~--~~~~~~~v~v~f~a~wC~~C~~~~p~~---~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~ 84 (287)
T 3qou_A 12 INESNLQQVL--EQSMTTPVLFYFWSERSQHCLQLTPIL---ESLAAQYNGQFILAKLDCDA--EQMIAAQFGLRAIPTV 84 (287)
T ss_dssp CCTTTHHHHH--TTTTTSCEEEEEECTTCTTTTTTHHHH---HHHHHHHTSSSEEEEEETTT--CHHHHHTTTCCSSSEE
T ss_pred CCHHHHHHHH--HhcCCCeEEEEEECCCChHHHHHHHHH---HHHHHHcCCCeEEEEEeCcc--CHHHHHHcCCCCCCeE
Confidence 3456788855 334589999999999999999997544 45555555679999998774 4578999999999999
Q ss_pred EEEeCCCCeeEEEecCCCChHHHHHHHHHHH
Q 021440 200 LVIDPITGQKICSWCGMINPQPLGEMLLPFM 230 (312)
Q Consensus 200 ~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl 230 (312)
.++. .|+.+..+.|..+.+.+...|...+
T Consensus 85 ~~~~--~G~~~~~~~g~~~~~~l~~~l~~~l 113 (287)
T 3qou_A 85 YLFQ--NGQPVDGFQGPQPEEAIRALLDXVL 113 (287)
T ss_dssp EEEE--TTEEEEEEESCCCHHHHHHHHHHHS
T ss_pred EEEE--CCEEEEEeeCCCCHHHHHHHHHHHc
Confidence 9994 6999999999998888877777665
No 70
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=98.68 E-value=7.2e-08 Score=78.92 Aligned_cols=96 Identities=13% Similarity=0.098 Sum_probs=74.5
Q ss_pred HcCCeEEEEeecCCCcccchhhcccCCCHHHHHHh-hccEEEEEeccCChh--------------------HHHHHHhcC
Q 021440 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQII-SVNFIFWQEYDDTSE--------------------GWKVCSFYN 192 (312)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i-~~nFIfwq~~~ds~E--------------------G~~~~~~Y~ 192 (312)
-++|++||++.++||..|+.+...+ ..+.+-+ ..++.|+.++.+... ...++..|.
T Consensus 24 ~~gk~vlv~F~~~~C~~C~~~~~~l---~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 100 (151)
T 2f9s_A 24 LKGKGVFLNFWGTWCEPCKKEFPYM---ANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYD 100 (151)
T ss_dssp GTTSEEEEEEECTTCHHHHHHHHHH---HHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTT
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHH---HHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcC
Confidence 4689999999999999999886543 2233333 336777777776532 346788899
Q ss_pred CCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhC
Q 021440 193 MDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRS 233 (312)
Q Consensus 193 ~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~~ 233 (312)
+..+|++.|||+ .|+.+..+.|..+++++.+.|...+...
T Consensus 101 v~~~P~~~lid~-~G~i~~~~~G~~~~~~l~~~l~~ll~~~ 140 (151)
T 2f9s_A 101 VSPLPTTFLINP-EGKVVKVVTGTMTESMIHDYMNLIKPGE 140 (151)
T ss_dssp CCSSCEEEEECT-TSEEEEEEESCCCHHHHHHHHHHHSCC-
T ss_pred CCCCCeEEEECC-CCcEEEEEeCCCCHHHHHHHHHHHHhhh
Confidence 999999999997 6999999999999999999998887654
No 71
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=98.67 E-value=9.7e-08 Score=76.20 Aligned_cols=96 Identities=18% Similarity=0.241 Sum_probs=73.9
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc-cEEEEEeccCChhHHHHHHhcCCCCCCeEEE
Q 021440 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV-NFIFWQEYDDTSEGWKVCSFYNMDSIPAVLV 201 (312)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~-nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~I 201 (312)
.+|++++ +.+|.+||+++++||..|+.+...+ ..+.+-+.. ++.|+.++.+. ...++..|++..+|++++
T Consensus 24 ~~f~~~l----~~~k~vvv~f~a~~C~~C~~~~~~l---~~l~~~~~~~~v~~~~vd~d~--~~~~~~~~~v~~~Pt~~~ 94 (121)
T 2j23_A 24 DQFKQVT----GGDKVVVIDFWATWCGPCKMIGPVF---EKISDTPAGDKVGFYKVDVDE--QSQIAQEVGIRAMPTFVF 94 (121)
T ss_dssp HHHHHHH----SSSSCEEEEEECTTCSTHHHHHHHH---HHHHTSTHHHHSEEEEEETTT--CHHHHHHHTCCSSSEEEE
T ss_pred HHHHHHH----cCCCEEEEEEECCCCHhHHHHHHHH---HHHHHHCcCCcEEEEEEECcC--CHHHHHHcCCCcccEEEE
Confidence 3455544 7899999999999999999997654 333333333 38888887765 456889999999999998
Q ss_pred EeCCCCeeEEEecCCCChHHHHHHHHHHH
Q 021440 202 IDPITGQKICSWCGMINPQPLGEMLLPFM 230 (312)
Q Consensus 202 IdprTGe~v~~~~G~~~~~~fl~~L~~fl 230 (312)
+. .|+.+..+.|. +++++.+.|.+.+
T Consensus 95 ~~--~G~~~~~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 95 FK--NGQKIDTVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp EE--TTEEEEEEESS-CHHHHHHHHHHHT
T ss_pred EE--CCeEEeeEcCC-CHHHHHHHHHHhh
Confidence 85 69999889998 8888777776654
No 72
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=98.67 E-value=1.3e-07 Score=78.69 Aligned_cols=99 Identities=17% Similarity=0.205 Sum_probs=76.3
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc--cEEEEEeccCChhHHHHHHhcCCCCCCeE
Q 021440 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDSIPAV 199 (312)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~--nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i 199 (312)
..+|++++..+ .+|++||+++.+||.+|+.+... +.++.++ ++.|..++.+. ...++..|++..+|++
T Consensus 20 ~~~~~~~~~~~--~~~~vvv~F~a~wC~~C~~~~p~------l~~l~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~ 89 (153)
T 2wz9_A 20 AGQFEELLRLK--AKSLLVVHFWAPWAPQCAQMNEV------MAELAKELPQVSFVKLEAEG--VPEVSEKYEISSVPTF 89 (153)
T ss_dssp HHHHHHHHHHT--TTSCEEEEEECTTCHHHHHHHHH------HHHHHHHCTTSEEEEEETTT--SHHHHHHTTCCSSSEE
T ss_pred HHHHHHHHHhc--CCCeEEEEEECCCCHhHHHHHHH------HHHHHHHcCCeEEEEEECCC--CHHHHHHcCCCCCCEE
Confidence 34566665433 48999999999999999999654 4444443 68899887765 4568899999999999
Q ss_pred EEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhC
Q 021440 200 LVIDPITGQKICSWCGMINPQPLGEMLLPFMDRS 233 (312)
Q Consensus 200 ~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~~ 233 (312)
+|++ .|+.+..+.|. +++++.+.|.+.+...
T Consensus 90 ~~~~--~G~~~~~~~G~-~~~~l~~~i~~~l~~~ 120 (153)
T 2wz9_A 90 LFFK--NSQKIDRLDGA-HAPELTKKVQRHASSG 120 (153)
T ss_dssp EEEE--TTEEEEEEESS-CHHHHHHHHHHHSCTT
T ss_pred EEEE--CCEEEEEEeCC-CHHHHHHHHHHHhccc
Confidence 9999 59998888995 7777777777776543
No 73
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=98.67 E-value=1.2e-07 Score=77.36 Aligned_cols=98 Identities=11% Similarity=0.107 Sum_probs=76.4
Q ss_pred cCCeEEEEeecCCCcccchhhcccCCCHHHHHHhh-ccEEEEEeccCChhH---------------------HHHHHhcC
Q 021440 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS-VNFIFWQEYDDTSEG---------------------WKVCSFYN 192 (312)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~-~nFIfwq~~~ds~EG---------------------~~~~~~Y~ 192 (312)
.+|++||++.++||..|+.+...+ ..+.+-+. .++.|+.++.+.... ..++..|.
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l---~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 105 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPAL---KELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYL 105 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHH---HHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTT
T ss_pred CCCEEEEEEECCcCHhHHHHhHHH---HHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcC
Confidence 589999999999999999876443 12233232 358888888776431 26778899
Q ss_pred CCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhCCCC
Q 021440 193 MDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRSPRK 236 (312)
Q Consensus 193 ~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~~~~~ 236 (312)
+..+|++.|||+ .|+.+..+.|..+++++.+.|...+..+...
T Consensus 106 v~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~l~~~~~~~~~~ 148 (152)
T 2lja_A 106 INGIPRFILLDR-DGKIISANMTRPSDPKTAEKFNELLGLEGHH 148 (152)
T ss_dssp CCSSCCEEEECT-TSCEEESSCCCTTCHHHHHHHHHHHTCCSSS
T ss_pred cCCCCEEEEECC-CCeEEEccCCCCCHHHHHHHHHHHhcccccc
Confidence 999999999997 5999988899889999999999888776544
No 74
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=98.66 E-value=6.6e-08 Score=79.44 Aligned_cols=98 Identities=16% Similarity=0.047 Sum_probs=75.4
Q ss_pred HHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHh----hccEEEEEeccCChh----------------------HH
Q 021440 132 ALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQII----SVNFIFWQEYDDTSE----------------------GW 185 (312)
Q Consensus 132 Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i----~~nFIfwq~~~ds~E----------------------G~ 185 (312)
+.-++|++||++..+||.+|+.+-. .+.++. ..++.++.++.|+.+ ..
T Consensus 20 ~~~~gk~vlv~F~a~wC~~C~~~~~------~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (151)
T 3raz_A 20 QSLKAPVRIVNLWATWCGPCRKEMP------AMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSR 93 (151)
T ss_dssp GGCCSSEEEEEEECTTCHHHHHHHH------HHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHH
T ss_pred HHhCCCEEEEEEEcCcCHHHHHHHH------HHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchH
Confidence 3347899999999999999998854 344443 346888888887533 44
Q ss_pred HHHHhcC--CCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhCCCC
Q 021440 186 KVCSFYN--MDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRSPRK 236 (312)
Q Consensus 186 ~~~~~Y~--~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~~~~~ 236 (312)
.++..|. +..+|++.|||+ .|+.+..+.|..+++++.+.|.+.....+..
T Consensus 94 ~~~~~~~~~v~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~l~~l~~~~~~~ 145 (151)
T 3raz_A 94 NFMKTYGNTVGVLPFTVVEAP-KCGYRQTITGEVNEKSLTDAVKLAHSKCREG 145 (151)
T ss_dssp HHHHTTTCCSCCSSEEEEEET-TTTEEEECCSCCCHHHHHHHHHHHHTC----
T ss_pred HHHHHhCCccCCCCEEEEECC-CCcEEEEECCCCCHHHHHHHHHHHHHHhhcc
Confidence 5677788 889999999997 6999999999999999999998887765543
No 75
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=98.66 E-value=7.9e-08 Score=76.17 Aligned_cols=90 Identities=13% Similarity=0.061 Sum_probs=70.3
Q ss_pred HcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc--cEEEEEeccCC---------------------hhHHHHHHh
Q 021440 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDT---------------------SEGWKVCSF 190 (312)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~--nFIfwq~~~ds---------------------~EG~~~~~~ 190 (312)
-.+|++||++.++||..|+.+.. .+.++.++ ++.|+.++.+. .....++..
T Consensus 23 ~~~k~~ll~f~~~~C~~C~~~~~------~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 96 (136)
T 1zzo_A 23 LLGKPAVLWFWAPWCPTCQGEAP------VVGQVAASHPEVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWAN 96 (136)
T ss_dssp GTTSCEEEEEECTTCHHHHHHHH------HHHHHHHHCTTSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHH
T ss_pred hCCCeEEEEEEcCCChhHHHHHH------HHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHH
Confidence 36899999999999999999854 33444333 67777777654 223467788
Q ss_pred cCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021440 191 YNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (312)
Q Consensus 191 Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~ 231 (312)
|.+..+|++.|||+ .|+.+ .+.|..+.+++.+.|.+.+.
T Consensus 97 ~~i~~~P~~~~id~-~g~i~-~~~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 97 FGVTQQPAYAFVDP-HGNVD-VVRGRMSQDELTRRVTALTS 135 (136)
T ss_dssp TTCCSSSEEEEECT-TCCEE-EEESCCCHHHHHHHHHHHC-
T ss_pred cCCCCCceEEEECC-CCCEE-EEecCCCHHHHHHHHHHHhc
Confidence 99999999999997 68888 89999999999888887764
No 76
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=98.65 E-value=6.4e-08 Score=85.75 Aligned_cols=104 Identities=17% Similarity=0.189 Sum_probs=83.7
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEE
Q 021440 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLV 201 (312)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~I 201 (312)
..+|++++ .+.+|.+||+++++||.+|+.+...+ +.+.+.++.++.|..++.+. ...++..|++..+|+++|
T Consensus 19 ~~~f~~~v---~~~~k~vvv~F~a~wC~~C~~~~p~l---~~l~~~~~~~v~~~~vd~d~--~~~l~~~~~v~~~Pt~~~ 90 (222)
T 3dxb_A 19 DDSFDTDV---LKADGAILVDFWAEWCGPCKMIAPIL---DEIADEYQGKLTVAKLNIDQ--NPGTAPKYGIRGIPTLLL 90 (222)
T ss_dssp TTTHHHHH---TTCSSCEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTCEEEEEETTT--CTTTGGGGTCCSBSEEEE
T ss_pred HHHHHHHH---HhcCCEEEEEEECCcCHHHHHHHHHH---HHHHHHhcCCcEEEEEECCC--CHHHHHHcCCCcCCEEEE
Confidence 44566544 45799999999999999999997654 55666666678888887765 345788999999999999
Q ss_pred EeCCCCeeEEEecCCCChHHHHHHHHHHHhhCCC
Q 021440 202 IDPITGQKICSWCGMINPQPLGEMLLPFMDRSPR 235 (312)
Q Consensus 202 IdprTGe~v~~~~G~~~~~~fl~~L~~fl~~~~~ 235 (312)
++ .|+.+..+.|..+.+++.+.|.+.+.....
T Consensus 91 ~~--~G~~~~~~~G~~~~~~l~~~l~~~l~~~~~ 122 (222)
T 3dxb_A 91 FK--NGEVAATKVGALSKGQLKEFLDANLAGSAM 122 (222)
T ss_dssp EE--TTEEEEEEESCCCHHHHHHHHHHHSCCSCC
T ss_pred EE--CCeEEEEeccccChHHHHHHHHhhcccccc
Confidence 96 599998999999999999999998865443
No 77
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=98.65 E-value=8.1e-08 Score=80.33 Aligned_cols=100 Identities=14% Similarity=0.193 Sum_probs=76.4
Q ss_pred cHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEEEe
Q 021440 124 SFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVID 203 (312)
Q Consensus 124 sf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IId 203 (312)
+|++++. ..++|++||+++.+||.+|+.+...+ ..+.+-++.++.|+.++.+. ...++..|++..+|+++|..
T Consensus 13 ~~~~~i~--~~~~k~vlv~F~a~WC~~C~~~~p~l---~~l~~~~~~~~~~~~vd~d~--~~~l~~~~~v~~~Pt~~~~~ 85 (149)
T 3gix_A 13 EVDQAIK--STAEKVLVLRFGRDEDPVCLQLDDIL---SKTSSDLSKMAAIYLVDVDQ--TAVYTQYFDISYIPSTVFFF 85 (149)
T ss_dssp HHHHHHH--HCCSSEEEEEEECTTSHHHHHHHHHH---HHHHTTTTTTEEEEEEETTT--CCHHHHHTTCCSSSEEEEEE
T ss_pred HHHHHHH--hcCCCEEEEEEECCCCHHHHHHHHHH---HHHHHHccCceEEEEEECCc--CHHHHHHcCCCccCeEEEEE
Confidence 4555543 25789999999999999999996433 22333334459999988754 45689999999999999544
Q ss_pred CCCCeeE---------EEecC-CCChHHHHHHHHHHHhh
Q 021440 204 PITGQKI---------CSWCG-MINPQPLGEMLLPFMDR 232 (312)
Q Consensus 204 prTGe~v---------~~~~G-~~~~~~fl~~L~~fl~~ 232 (312)
.|+.+ ..+.| ..+.++|.+.|.+.+..
T Consensus 86 --~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~~~ 122 (149)
T 3gix_A 86 --NGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIYRG 122 (149)
T ss_dssp --TTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHHHHH
T ss_pred --CCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHHHHH
Confidence 59988 77889 88999999999888754
No 78
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=98.64 E-value=2.5e-07 Score=70.43 Aligned_cols=94 Identities=15% Similarity=0.233 Sum_probs=71.8
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc--cEEEEEeccCChhHHHHHHhcCCCCCCeEE
Q 021440 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDSIPAVL 200 (312)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~--nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~ 200 (312)
.+|++++.. ..+|.++|+++++||..|+.+... +.++.++ ++.|+.++.+. ...++..|++..+|+++
T Consensus 8 ~~~~~~l~~--~~~~~~~v~f~~~~C~~C~~~~~~------l~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~ 77 (104)
T 2vim_A 8 ADLEKLINE--NKGRLIVVDFFAQWCGPCRNIAPK------VEALAKEIPEVEFAKVDVDQ--NEEAAAKYSVTAMPTFV 77 (104)
T ss_dssp HHHHHHHHT--TTTSCEEEEEECTTCHHHHHHHHH------HHHHHHHCTTSEEEEEETTT--CHHHHHHTTCCSSSEEE
T ss_pred HHHHHHHHh--cCCCeEEEEEECCCCHHHHHhhHH------HHHHHHHCCCCEEEEEeccC--CHHHHHHcCCccccEEE
Confidence 345555532 378999999999999999999754 3444433 68888887764 45688999999999988
Q ss_pred EEeCCCCeeEEEecCCCChHHHHHHHHHH
Q 021440 201 VIDPITGQKICSWCGMINPQPLGEMLLPF 229 (312)
Q Consensus 201 IIdprTGe~v~~~~G~~~~~~fl~~L~~f 229 (312)
++. .|+.+..+.| .+++++.+.|.++
T Consensus 78 ~~~--~g~~~~~~~G-~~~~~l~~~l~~~ 103 (104)
T 2vim_A 78 FIK--DGKEVDRFSG-ANETKLRETITRH 103 (104)
T ss_dssp EEE--TTEEEEEEES-SCHHHHHHHHHHH
T ss_pred EEe--CCcEEEEEeC-CCHHHHHHHHHhh
Confidence 886 6999988999 5888777766654
No 79
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=98.63 E-value=7.3e-08 Score=77.37 Aligned_cols=88 Identities=9% Similarity=0.023 Sum_probs=68.8
Q ss_pred cCCeEEEEeecCCCcccchhhcccCCCHHHHHHhh-ccEEEEEeccCCh-----------------------hHHHHHHh
Q 021440 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS-VNFIFWQEYDDTS-----------------------EGWKVCSF 190 (312)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~-~nFIfwq~~~ds~-----------------------EG~~~~~~ 190 (312)
.+|++||++.++||..|+.+...+ ..+.+-+. .++.|+.++.+.. ....++..
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 109 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQF---QSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKE 109 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHH---HHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHH---HHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHh
Confidence 789999999999999999986543 22333333 4677888877642 23467889
Q ss_pred cCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHH
Q 021440 191 YNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEML 226 (312)
Q Consensus 191 Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L 226 (312)
|++..+|++.|||+ .|+.+..+.|..+.+++.+.|
T Consensus 110 ~~v~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 110 YHIITIPTSFLLNE-KGEIEKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp TTCCEESEEEEECT-TCCEEEEEESCCCHHHHHHHH
T ss_pred cCcCccCeEEEEcC-CCcEEEEEcCCcCHHHHHHhh
Confidence 99999999999997 699999999999998877655
No 80
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=98.62 E-value=1.4e-07 Score=74.29 Aligned_cols=91 Identities=14% Similarity=0.172 Sum_probs=69.2
Q ss_pred HcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCC--------------------------hhHHHH
Q 021440 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDT--------------------------SEGWKV 187 (312)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds--------------------------~EG~~~ 187 (312)
-++|++||++.++||..|+.+-..+ ..+.+-.+.++.++.++.+. .....+
T Consensus 20 ~~gk~~lv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 96 (138)
T 4evm_A 20 YKGKKVYLKFWASWCSICLASLPDT---DEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKL 96 (138)
T ss_dssp GTTSEEEEEECCTTCHHHHHHHHHH---HHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHH
T ss_pred hCCCEEEEEEEcCcCHHHHHHHHHH---HHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHH
Confidence 4689999999999999999886554 33333344577777773211 123357
Q ss_pred HHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHH
Q 021440 188 CSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLP 228 (312)
Q Consensus 188 ~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~ 228 (312)
+..|++..+|++.|||+ .|+.+..+.|..+++++.+.|.+
T Consensus 97 ~~~~~v~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~l~~ 136 (138)
T 4evm_A 97 LETYGVRSYPTQAFIDK-EGKLVKTHPGFMEKDAILQTLKE 136 (138)
T ss_dssp HHHTTCCSSSEEEEECT-TCCEEEEEESCCCHHHHHHHHHH
T ss_pred HHHcCcccCCeEEEECC-CCcEEEeecCCCcHHHHHHHHHh
Confidence 88999999999999997 69999999999999888877764
No 81
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=98.61 E-value=1.1e-07 Score=74.57 Aligned_cols=96 Identities=8% Similarity=0.111 Sum_probs=72.6
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc--cEEEEEeccCChhHHHHHHhcCCCCCCe
Q 021440 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDSIPA 198 (312)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~--nFIfwq~~~ds~EG~~~~~~Y~~~~~P~ 198 (312)
-..+| +++ .++|.+||+++++||..|+.+.. .+.++.++ ++.|..++.+ +...++..|++..+|+
T Consensus 9 ~~~~f-~~~----~~~~~~vv~f~a~wC~~C~~~~~------~l~~~~~~~~~v~~~~vd~~--~~~~l~~~~~v~~~Pt 75 (110)
T 2l6c_A 9 TEAGM-AHF----EGLSDAIVFFHKNLCPHCKNMEK------VLDKFGARAPQVAISSVDSE--ARPELMKELGFERVPT 75 (110)
T ss_dssp GGCSH-HHH----TTCSEEEEEEECSSCSTHHHHHH------HHHHHHTTCTTSCEEEEEGG--GCHHHHHHTTCCSSCE
T ss_pred CHHHH-HHH----HcCCCEEEEEECCCCHhHHHHHH------HHHHHHHHCCCcEEEEEcCc--CCHHHHHHcCCcccCE
Confidence 34556 443 46799999999999999999954 34444443 4667776554 4567889999999999
Q ss_pred EEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021440 199 VLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (312)
Q Consensus 199 i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~ 231 (312)
++|+. .|+.+..+.|..++++|.+.|..+..
T Consensus 76 ~~~~~--~G~~v~~~~G~~~~~~l~~~~~~~~~ 106 (110)
T 2l6c_A 76 LVFIR--DGKVAKVFSGIMNPRELQALYASIHH 106 (110)
T ss_dssp EEEEE--SSSEEEEEESCCCHHHHHHHHHTC--
T ss_pred EEEEE--CCEEEEEEcCCCCHHHHHHHHHHHhh
Confidence 99993 69999999999999987777766544
No 82
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.61 E-value=1.2e-07 Score=75.46 Aligned_cols=90 Identities=12% Similarity=0.022 Sum_probs=69.9
Q ss_pred HHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc--cEEEEEeccCCh--------------------hHHHHHHh
Q 021440 133 LAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTS--------------------EGWKVCSF 190 (312)
Q Consensus 133 k~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~--nFIfwq~~~ds~--------------------EG~~~~~~ 190 (312)
.-++|++||++.++||..|+.+... +.++.++ ++.|+.++.+.. ....+++.
T Consensus 21 ~~~~k~~lv~f~~~~C~~C~~~~~~------l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 94 (136)
T 1lu4_A 21 SLQGKPAVLWFWTPWCPFCNAEAPS------LSQVAAANPAVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWAR 94 (136)
T ss_dssp GGTTSCEEEEEECTTCHHHHHHHHH------HHHHHHHCTTSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHH
T ss_pred HhCCCEEEEEEECCcChhHHHHHHH------HHHHHHHCCCcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHh
Confidence 3468999999999999999998643 3444433 677787777652 13467788
Q ss_pred cCCCCCCeEEEEeCCCCeeEEEec---CCCChHHHHHHHHHHH
Q 021440 191 YNMDSIPAVLVIDPITGQKICSWC---GMINPQPLGEMLLPFM 230 (312)
Q Consensus 191 Y~~~~~P~i~IIdprTGe~v~~~~---G~~~~~~fl~~L~~fl 230 (312)
|++..+|++.|||+ .|+.+ .+. |..+++++.+.|.+.+
T Consensus 95 ~~i~~~P~~~lid~-~G~i~-~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 95 YNVPWQPAFVFYRA-DGTST-FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp TTCCSSSEEEEECT-TSCEE-EECCSSSCCCHHHHHHHHHHC-
T ss_pred cCCCCCCEEEEECC-CCcEE-EEEcCCCccCHHHHHHHHHHHh
Confidence 99999999999997 68888 888 9999998888887654
No 83
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.60 E-value=1.3e-07 Score=80.54 Aligned_cols=95 Identities=16% Similarity=0.126 Sum_probs=77.0
Q ss_pred HHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCC-hh--------------------HHHHHHh
Q 021440 132 ALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDT-SE--------------------GWKVCSF 190 (312)
Q Consensus 132 Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds-~E--------------------G~~~~~~ 190 (312)
+.-.+|++||++..+||..|+..- +.+.++.++++.++.++.+. .+ ...++..
T Consensus 54 ~~~~gk~vll~F~a~~C~~C~~~~------~~l~~l~~~~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 127 (176)
T 3kh7_A 54 ADLKGKPALVNVWGTWCPSCRVEH------PELTRLAEQGVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLD 127 (176)
T ss_dssp GGGCSSCEEEEEECTTCHHHHHHH------HHHHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHH
T ss_pred HHhCCCEEEEEEECCcCHHHHHHH------HHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHH
Confidence 344589999999999999999884 66788888788888887432 21 2356678
Q ss_pred cCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhC
Q 021440 191 YNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRS 233 (312)
Q Consensus 191 Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~~ 233 (312)
|.+..+|++.|||+ .|+.+..+.|..+++++.+.|.+.|+.-
T Consensus 128 ~~v~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~l~~~l~~l 169 (176)
T 3kh7_A 128 LGVYGAPETYLIDK-QGIIRHKIVGVVDQKVWREQLAPLYQQL 169 (176)
T ss_dssp HTCCSSCEEEEECT-TCBEEEEEESCCCHHHHHHHTHHHHHHH
T ss_pred cCCCCCCeEEEECC-CCeEEEEEcCCCCHHHHHHHHHHHHHHH
Confidence 88899999999997 6999999999999999999999888753
No 84
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=98.60 E-value=7.7e-08 Score=78.53 Aligned_cols=98 Identities=9% Similarity=0.073 Sum_probs=72.4
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc-cEEEEEeccCChhHHHHHHhcCCCCCCeEEE
Q 021440 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV-NFIFWQEYDDTSEGWKVCSFYNMDSIPAVLV 201 (312)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~-nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~I 201 (312)
..|++++. ...+|++||+++++||.+|+.+.. .+.++.++ +++|+.++.+. ...++..|++..+|+++|
T Consensus 29 ~~~~~~l~--~~~~k~vvv~F~a~wC~~C~~~~p------~l~~l~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~ 98 (133)
T 3cxg_A 29 GSLNQVFS--STQNSSIVIKFGAVWCKPCNKIKE------YFKNQLNYYYVTLVDIDVDI--HPKLNDQHNIKALPTFEF 98 (133)
T ss_dssp THHHHHHT--C-CCSEEEEEEECTTCHHHHHTHH------HHHGGGGTEECEEEEEETTT--CHHHHHHTTCCSSSEEEE
T ss_pred hHHHHHHH--hcCCCEEEEEEECCCCHHHHHHHH------HHHHHHHhcCEEEEEEeccc--hHHHHHhcCCCCCCEEEE
Confidence 45666553 334799999999999999999853 34444443 46788776654 467889999999999999
Q ss_pred EeCCCCe--eEEEecCCCChHHHHHHHHHHHh
Q 021440 202 IDPITGQ--KICSWCGMINPQPLGEMLLPFMD 231 (312)
Q Consensus 202 IdprTGe--~v~~~~G~~~~~~fl~~L~~fl~ 231 (312)
+....|+ .+..+.|. +++++.+.|.+++.
T Consensus 99 ~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l~ 129 (133)
T 3cxg_A 99 YFNLNNEWVLVHTVEGA-NQNDIEKAFQKYCL 129 (133)
T ss_dssp EEEETTEEEEEEEEESC-CHHHHHHHHHHHSE
T ss_pred EEecCCCeEEEEEEcCC-CHHHHHHHHHHHHH
Confidence 9312466 77888998 88888888877664
No 85
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=98.59 E-value=1.2e-07 Score=79.12 Aligned_cols=91 Identities=16% Similarity=0.127 Sum_probs=73.5
Q ss_pred cCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCC---------------------hhHHHHHHhcCC
Q 021440 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDT---------------------SEGWKVCSFYNM 193 (312)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds---------------------~EG~~~~~~Y~~ 193 (312)
.+|++||++.++||..|+.+. +.+.++.++++.++.++.+. .+...++..|++
T Consensus 50 ~gk~vll~F~a~~C~~C~~~~------~~l~~l~~~~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 123 (168)
T 2b1k_A 50 QGKPVLLNVWATWCPTCRAEH------QYLNQLSAQGIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGV 123 (168)
T ss_dssp CSSCEEEEEECTTCHHHHHHH------HHHHHHHHTTCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHTC
T ss_pred CCCEEEEEEECCCCHHHHHHH------HHHHHHHHCCCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcCc
Confidence 679999999999999999885 45677777777777776432 123357778899
Q ss_pred CCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021440 194 DSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (312)
Q Consensus 194 ~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~ 232 (312)
..+|++.|||+ .|+.+..+.|..+++.+.+.|.+.+++
T Consensus 124 ~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~l~~~l~~ 161 (168)
T 2b1k_A 124 YGAPETFLIDG-NGIIRYRHAGDLNPRVWEEEIKPLWEK 161 (168)
T ss_dssp CSSSEEEEECT-TSBEEEEEESCCCHHHHHHTTHHHHHH
T ss_pred cccCEEEEECC-CCeEEEEEeCCCCHHHHHHHHHHHHHH
Confidence 99999999997 699998999999999998888887754
No 86
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=98.59 E-value=3.2e-07 Score=73.46 Aligned_cols=98 Identities=11% Similarity=0.034 Sum_probs=71.8
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHh-----hccEEEEEeccCChhHHHHHHhcCCCC
Q 021440 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQII-----SVNFIFWQEYDDTSEGWKVCSFYNMDS 195 (312)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i-----~~nFIfwq~~~ds~EG~~~~~~Y~~~~ 195 (312)
-..+|++.+. +.+|++||+++++||.+|+.|...+ ..+.+.+ +.+++|..++.+. ...++..|++..
T Consensus 21 ~~~~f~~~~~---~~~~~vlv~F~a~wC~~C~~~~p~~---~~la~~~~~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~ 92 (127)
T 3h79_A 21 TDETFDSIVM---DPEKDVFVLYYVPWSRHSVAAMRLW---DDLSMSQSQKRNHLTFVAARIDGEK--YPDVIERMRVSG 92 (127)
T ss_dssp CTTTHHHHHT---CTTCEEEEEEECTTCHHHHHHHHHH---HHHHHHHHTSTTTTTEEEEEEETTT--CHHHHHHTTCCS
T ss_pred ChhhHHHHHh---CCCCCEEEEEECCccHHHHHHhHHH---HHHHHHHHhcccCCCeEEEEEEccc--cHhHHHhcCCcc
Confidence 3456777654 4689999999999999999996522 1222221 2468999887764 567899999999
Q ss_pred CCeEEEEeCCCCeeE--EEecCCCChHHHHHHHHH
Q 021440 196 IPAVLVIDPITGQKI--CSWCGMINPQPLGEMLLP 228 (312)
Q Consensus 196 ~P~i~IIdprTGe~v--~~~~G~~~~~~fl~~L~~ 228 (312)
||++.++.+ |..+ ..+.|..+.+.+++.|.+
T Consensus 93 ~Pt~~~~~~--g~~~~~~~~~G~~~~~~l~~~i~~ 125 (127)
T 3h79_A 93 FPTMRYYTR--IDKQEPFEYSGQRYLSLVDSFVFQ 125 (127)
T ss_dssp SSEEEEECS--SCSSSCEECCSCCCHHHHHHHHHH
T ss_pred CCEEEEEeC--CCCCCceEecCCccHHHHHHHHHh
Confidence 999999985 4332 468898888877665544
No 87
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=98.59 E-value=3.7e-07 Score=72.03 Aligned_cols=87 Identities=13% Similarity=0.150 Sum_probs=64.9
Q ss_pred HHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhh---ccEEEEEeccCC--hhHHHHHHhcCCCCCCeEEEEeCCC
Q 021440 132 ALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS---VNFIFWQEYDDT--SEGWKVCSFYNMDSIPAVLVIDPIT 206 (312)
Q Consensus 132 Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~---~nFIfwq~~~ds--~EG~~~~~~Y~~~~~P~i~IIdprT 206 (312)
+.+.+|.+||+++++||.+|+.+... +.++.+ ..+++..++... .+...++..|++..+|+++++. .
T Consensus 25 ~~~~~~~~~v~f~a~wC~~C~~~~p~------l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~Pt~~~~~--~ 96 (118)
T 1zma_A 25 ALDKKETATFFIGRKTCPYCRKFAGT------LSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGIPTVPGFVHIT--D 96 (118)
T ss_dssp HHHTTCCEEEEEECTTCHHHHHHHHH------HHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHTCCSSCEEEEEE--T
T ss_pred HHhCCCeEEEEEECCCCccHHHHHHH------HHHHHHhcCCeEEEEECCCcCcHHHHHHHHHHcCCCCCCeEEEEE--C
Confidence 34568999999999999999999643 444443 345555443222 3445788999999999999996 5
Q ss_pred CeeEEEecCCCChHHHHHHH
Q 021440 207 GQKICSWCGMINPQPLGEML 226 (312)
Q Consensus 207 Ge~v~~~~G~~~~~~fl~~L 226 (312)
|+.+..+.|..+++++.+.|
T Consensus 97 G~~~~~~~G~~~~~~l~~~l 116 (118)
T 1zma_A 97 GQINVRCDSSMSAQEIKDFA 116 (118)
T ss_dssp TEEEEECCTTCCHHHHHHHH
T ss_pred CEEEEEecCCCCHHHHHHHh
Confidence 99888899998888766554
No 88
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=98.59 E-value=2.1e-07 Score=75.13 Aligned_cols=90 Identities=16% Similarity=0.234 Sum_probs=69.7
Q ss_pred cCCeEEEEeecCCCcccchhhcccCCCHHHHHHh-h-ccEEEEEeccCChh-----------------------HHHHHH
Q 021440 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQII-S-VNFIFWQEYDDTSE-----------------------GWKVCS 189 (312)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i-~-~nFIfwq~~~ds~E-----------------------G~~~~~ 189 (312)
.+|++||++.++||..|+.+...+ ..+.+-+ . .++.|+.++.+... ...++.
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l---~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 108 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAEL---KRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAK 108 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHH---HHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHH
T ss_pred CCcEEEEEEECCCCHHHHHHhHHH---HHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHH
Confidence 689999999999999999986543 2233333 2 24888888888654 557889
Q ss_pred hcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021440 190 FYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (312)
Q Consensus 190 ~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~ 231 (312)
.|++..+|++.|||+ .|+.+..+. +.+++.+.|.+.|.
T Consensus 109 ~~~v~~~P~~~lid~-~G~i~~~~~---~~~~l~~~l~~ll~ 146 (148)
T 3fkf_A 109 QYAILTLPTNILLSP-TGKILARDI---QGEALTGKLKELLK 146 (148)
T ss_dssp HTTCCSSSEEEEECT-TSBEEEESC---CHHHHHHHHHHHC-
T ss_pred hcCCCCcCEEEEECC-CCeEEEecC---CHHHHHHHHHHHHc
Confidence 999999999999997 688876654 78888888887764
No 89
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=98.58 E-value=7.4e-08 Score=79.31 Aligned_cols=97 Identities=13% Similarity=0.098 Sum_probs=72.9
Q ss_pred HHHHHHcCCeEEEEeecCCCcccch-hhcccCCCHHHHHHhh----ccEEEEEeccC-------Chh-------------
Q 021440 129 KDAALAQDKWLLVNLQSTKEFSSLM-LNRDTWGNEAVSQIIS----VNFIFWQEYDD-------TSE------------- 183 (312)
Q Consensus 129 ~~~Ak~~~KwLLVniq~~~~f~c~~-lnRDvw~~~~V~~~i~----~nFIfwq~~~d-------s~E------------- 183 (312)
...+.-++|++||++..+||.+|.. +- +.+.++.+ .++.|+.++.+ +.+
T Consensus 23 ~~l~~~~gk~vlv~F~a~~C~~C~~e~~------~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (160)
T 3lor_A 23 LSNEDLRGKVVVVEVFQMLCPGCVNHGV------PQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKF 96 (160)
T ss_dssp CCHHHHTTSEEEEEEECTTCHHHHHTHH------HHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCS
T ss_pred cCHHHhCCCEEEEEEEcCCCcchhhhhh------HHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCC
Confidence 3345557999999999999999987 33 23333332 34777777652 111
Q ss_pred ------HH------HHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021440 184 ------GW------KVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (312)
Q Consensus 184 ------G~------~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~ 232 (312)
.. .++..|++..+|++.|||+ .|+.+..+.|..+++++.+.|.+.|.+
T Consensus 97 ~~~~d~~~~~~~~~~~~~~~~v~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~i~~ll~~ 156 (160)
T 3lor_A 97 PVAVDMPREGQRIPSTMKKYRLEGTPSIILADR-KGRIRQVQFGQVDDFVLGLLLGSLLSE 156 (160)
T ss_dssp CEEEECCCTTCSSCHHHHHTTCCSSSEEEEECT-TSBEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred cEEECCccccchhhhHHHhcccCccceEEEECC-CCcEEEEecCcCCHHHHHHHHHHHHhc
Confidence 11 2778899999999999997 699999999999999999999998865
No 90
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.57 E-value=1.8e-07 Score=76.45 Aligned_cols=92 Identities=17% Similarity=0.219 Sum_probs=72.4
Q ss_pred HcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc-cEEEEEeccCCh---------------------hHHHHHHhc
Q 021440 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV-NFIFWQEYDDTS---------------------EGWKVCSFY 191 (312)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~-nFIfwq~~~ds~---------------------EG~~~~~~Y 191 (312)
-.+|++||++.++||..|+.+. +.+.++.++ ++.|+.++.+.. +...+++.|
T Consensus 40 ~~gk~~ll~f~~~~C~~C~~~~------~~l~~l~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 113 (156)
T 1kng_A 40 FKGKVSLVNVWASWCVPCHDEA------PLLTELGKDKRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEW 113 (156)
T ss_dssp GTTSCEEEEEECTTCHHHHHHH------HHHHHHTTCTTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHT
T ss_pred hCCCEEEEEEEcccCHhHHHHH------HHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhc
Confidence 3489999999999999999875 455666554 377777765432 233577789
Q ss_pred CCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021440 192 NMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (312)
Q Consensus 192 ~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~ 232 (312)
++..+|++.|||+ .|+.+..+.|..+.+++.+.|.+.+++
T Consensus 114 ~v~~~P~~~~id~-~G~i~~~~~g~~~~~~l~~~l~~~l~~ 153 (156)
T 1kng_A 114 GVYGVPETFVVGR-EGTIVYKLVGPITPDNLRSVLLPQMEK 153 (156)
T ss_dssp TCCSSCEEEEECT-TSBEEEEEESCCCHHHHHHTHHHHHHH
T ss_pred CcCccCeEEEEcC-CCCEEEEEeCCCCHHHHHHHHHHHHHH
Confidence 9999999999997 699998999999999998888887754
No 91
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=98.57 E-value=1.4e-07 Score=76.05 Aligned_cols=93 Identities=10% Similarity=0.026 Sum_probs=71.5
Q ss_pred cCCeEEEEeecCCCcccchhhcccCCCHHHHHHh-hccEEEEEeccCChhH----------HH-------------HHHh
Q 021440 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQII-SVNFIFWQEYDDTSEG----------WK-------------VCSF 190 (312)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i-~~nFIfwq~~~ds~EG----------~~-------------~~~~ 190 (312)
.+|++||++.++||..|+.+...+- .+.+-+ ..++.|+.++.+.... .. ++..
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~---~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 106 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLY---DWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKIT 106 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHH---HHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHH---HHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHh
Confidence 6799999999999999999865431 133333 3358888888774322 11 7788
Q ss_pred cCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021440 191 YNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (312)
Q Consensus 191 Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~ 231 (312)
|.+..+|++.|||+ .|+.+..+.|..+.+++++.|.+.+.
T Consensus 107 ~~i~~~P~~~lid~-~G~i~~~~~g~~~~~~~l~~l~~~l~ 146 (148)
T 3hcz_A 107 YDIYATPVLYVLDK-NKVIIAKRIGYENLDDFLVQYEKSLK 146 (148)
T ss_dssp HCCCSSCEEEEECT-TCBEEEESCCGGGHHHHHHHHHHHHH
T ss_pred cCcCCCCEEEEECC-CCcEEEecCCHHHHHHHHHHHHHHhc
Confidence 99999999999997 69999999888888888888877664
No 92
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=98.57 E-value=1.6e-07 Score=80.75 Aligned_cols=100 Identities=6% Similarity=0.064 Sum_probs=79.0
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc---cEEEEEeccCChhHHHHHHhcCCCCCCe
Q 021440 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV---NFIFWQEYDDTSEGWKVCSFYNMDSIPA 198 (312)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~---nFIfwq~~~ds~EG~~~~~~Y~~~~~P~ 198 (312)
.-+|++++.. +.+|+++|+|..+||.+|++|. |-+.++-.+ ..+|+.+|+|. ...++..|.+.+.|+
T Consensus 29 ~~~f~~~v~~--~~~k~VVVdF~A~WCgPCk~m~------PvleelA~e~~~~v~f~kVDVDe--~~e~a~~y~V~siPT 98 (160)
T 2av4_A 29 GWAVDQAIVN--EDERLVCIRFGHDYDPDCMKMD------ELLYKVADDIKNFCVIYLVDITE--VPDFNTMYELYDPVS 98 (160)
T ss_dssp HHHHHHHHHH--CSSSEEEEEEECTTSHHHHHHH------HHHHHHHHHHTTTEEEEEEETTT--CCTTTTTTTCCSSEE
T ss_pred HHHHHHHHHh--cCCCEEEEEEECCCChhHHHHH------HHHHHHHHHccCCcEEEEEECCC--CHHHHHHcCCCCCCE
Confidence 3457777632 5789999999999999999995 445555443 48899998874 456899999999999
Q ss_pred EEEEeCCCCeeE--E-------EecCCCC-hHHHHHHHHHHHhhC
Q 021440 199 VLVIDPITGQKI--C-------SWCGMIN-PQPLGEMLLPFMDRS 233 (312)
Q Consensus 199 i~IIdprTGe~v--~-------~~~G~~~-~~~fl~~L~~fl~~~ 233 (312)
++++- .|+.+ . ++.|..+ .++|++.|..++...
T Consensus 99 ~~fFk--~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~r~a 141 (160)
T 2av4_A 99 VMFFY--RNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIFRGA 141 (160)
T ss_dssp EEEEE--TTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHHHHH
T ss_pred EEEEE--CCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHHHHh
Confidence 98886 48877 4 6889876 899999999888653
No 93
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=98.57 E-value=7e-08 Score=75.17 Aligned_cols=98 Identities=12% Similarity=0.109 Sum_probs=72.8
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhh---ccEEEEEeccCChhHHHHHHhcCCCCCC
Q 021440 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS---VNFIFWQEYDDTSEGWKVCSFYNMDSIP 197 (312)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~---~nFIfwq~~~ds~EG~~~~~~Y~~~~~P 197 (312)
-..+|++++ +++|++||+++++||..|+.+...+ ..+.+-++ .+++|..++.+. ...++..|++..+|
T Consensus 13 ~~~~~~~~~----~~~~~~lv~f~~~~C~~C~~~~~~~---~~~~~~~~~~~~~v~~~~vd~~~--~~~~~~~~~v~~~P 83 (120)
T 1mek_A 13 RKSNFAEAL----AAHKYLLVEFYAPWCGHCKALAPEY---AKAAGKLKAEGSEIRLAKVDATE--ESDLAQQYGVRGYP 83 (120)
T ss_dssp CTTTHHHHH----HHCSEEEEEEECSSCSTTSTTHHHH---HHHHHTTTTTCCCCBCEEEETTT--CCSSHHHHTCCSSS
T ss_pred chhhHHHHH----ccCCeEEEEEECCCCHHHHHhhHHH---HHHHHHHhccCCcEEEEEEcCCC--CHHHHHHCCCCccc
Confidence 456677765 3689999999999999999997543 22333332 357888776654 34688899999999
Q ss_pred eEEEEeCCCCeeE--EEecCCCChHHHHHHHHHH
Q 021440 198 AVLVIDPITGQKI--CSWCGMINPQPLGEMLLPF 229 (312)
Q Consensus 198 ~i~IIdprTGe~v--~~~~G~~~~~~fl~~L~~f 229 (312)
++.++. .|+.+ ..+.|..+.+++.+.|.+.
T Consensus 84 t~~~~~--~g~~~~~~~~~g~~~~~~l~~~l~~~ 115 (120)
T 1mek_A 84 TIKFFR--NGDTASPKEYTAGREADDIVNWLKKR 115 (120)
T ss_dssp EEEEEE--SSCSSSCEECCCCSSHHHHHHHHHTT
T ss_pred EEEEEe--CCCcCCcccccCccCHHHHHHHHHhc
Confidence 999994 58876 7789988888876666543
No 94
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=98.56 E-value=2e-07 Score=76.02 Aligned_cols=101 Identities=8% Similarity=-0.087 Sum_probs=75.8
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhcc-EEEEEeccCC-------hhHHHHHHhcCC
Q 021440 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVN-FIFWQEYDDT-------SEGWKVCSFYNM 193 (312)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~n-FIfwq~~~ds-------~EG~~~~~~Y~~ 193 (312)
..+|++++.. ++||+++++||.+|+.+. +.+.++.++. +.|..++.+. .+...++..|++
T Consensus 23 ~~~~~~~~~~------~vlv~F~a~wC~~C~~~~------p~l~~l~~~~~v~~~~vd~~~~~~~~~~d~~~~l~~~~~v 90 (135)
T 3emx_A 23 PEEFRQLLQG------DAILAVYSKTCPHCHRDW------PQLIQASKEVDVPIVMFIWGSLIGERELSAARLEMNKAGV 90 (135)
T ss_dssp HHHHHHHHTS------SEEEEEEETTCHHHHHHH------HHHHHHHTTCCSCEEEEEECTTCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhCC------cEEEEEECCcCHhhhHhC------hhHHHHHHHCCCEEEEEECCCchhhhhhhhhHHHHHHcCC
Confidence 3445555432 999999999999999995 5566666653 6677777644 467788999999
Q ss_pred CCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhCCCC
Q 021440 194 DSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRSPRK 236 (312)
Q Consensus 194 ~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~~~~~ 236 (312)
..+|+++|++ .|+.+..+.|..+.+.+.+.+.+.++....+
T Consensus 91 ~~~Pt~~~~~--~G~~v~~~~G~~~~~~~~~~i~~~~~~~~~~ 131 (135)
T 3emx_A 91 EGTPTLVFYK--EGRIVDKLVGATPWSLKVEKAREIYGGEGHH 131 (135)
T ss_dssp CSSSEEEEEE--TTEEEEEEESCCCHHHHHHHHHHHC------
T ss_pred ceeCeEEEEc--CCEEEEEEeCCCCHHHHHHHHHHHhCCCccc
Confidence 9999999998 5999999999999988888888877665443
No 95
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=98.55 E-value=4.3e-07 Score=77.03 Aligned_cols=94 Identities=10% Similarity=0.109 Sum_probs=70.1
Q ss_pred cCCeEEEEeecCCCcccchhhcccCCCHHHHHHhh-ccE------EEEEeccCC--h-hHHHHHHh--------------
Q 021440 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS-VNF------IFWQEYDDT--S-EGWKVCSF-------------- 190 (312)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~-~nF------Ifwq~~~ds--~-EG~~~~~~-------------- 190 (312)
++||+||++..+||..|+.+...+ ..+.+-++ .++ .|+.++.+. . ...+++..
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l---~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 134 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDL---QIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFM 134 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHH---HHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHH---HHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcch
Confidence 579999999999999999886543 22333333 336 788887776 2 23345443
Q ss_pred -------cCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021440 191 -------YNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (312)
Q Consensus 191 -------Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~ 232 (312)
|++..+|++.|||+ .|+.+..+.|..+++++.+.|.+.+.+
T Consensus 135 ~~~~~~~~~v~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~l~~ll~~ 182 (183)
T 3lwa_A 135 TAASLGGVPASVIPTTIVLDK-QHRPAAVFLREVTSKDVLDVALPLVDE 182 (183)
T ss_dssp GGGGTTTCCTTCCSEEEEECT-TSCEEEEECSCCCHHHHHHHHHHHHHC
T ss_pred HHHHhccCCCCCCCeEEEECC-CCcEEEEEcCCCCHHHHHHHHHHHHhc
Confidence 35678999999997 699999999999999999999988764
No 96
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=98.55 E-value=4.2e-07 Score=74.89 Aligned_cols=98 Identities=15% Similarity=0.082 Sum_probs=71.9
Q ss_pred HcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhh-ccEEEEEeccCCh--hHHHHHHhc-------------------
Q 021440 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS-VNFIFWQEYDDTS--EGWKVCSFY------------------- 191 (312)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~-~nFIfwq~~~ds~--EG~~~~~~Y------------------- 191 (312)
-++|++||++.++||..|+.+...+ ..+.+-++ .++.|+.++.+.. ...+++..+
T Consensus 32 ~~gk~vlv~f~~~~C~~C~~~~~~l---~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (165)
T 3or5_A 32 LKGKAYIVNFFATWCPPCRSEIPDM---VQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIRAFNG 108 (165)
T ss_dssp GTTCEEEEEEECTTSHHHHHHHHHH---HHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCHHHHHHHHT
T ss_pred cCCCEEEEEEEcCcCHHHHHHHHHH---HHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCceEecCHHHHHHHhh
Confidence 3679999999999999999986554 22333333 3588888877652 233443332
Q ss_pred ----CCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhCCC
Q 021440 192 ----NMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRSPR 235 (312)
Q Consensus 192 ----~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~~~~ 235 (312)
.+..+|++.|||+ .|+.+..+.|..+++++.+.|.+.|.+...
T Consensus 109 ~~~~~i~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~l~~~l~~~~~ 155 (165)
T 3or5_A 109 YIDGGITGIPTSFVIDA-SGNVSGVIVGPRSKADFDRIVKMALGAKAA 155 (165)
T ss_dssp TSTTCSCSSSEEEEECT-TSBEEEEECSCCCHHHHHHHHHHHHC----
T ss_pred hhccCCCCCCeEEEECC-CCcEEEEEcCCCCHHHHHHHHHHHHhhhcc
Confidence 6889999999997 699999999999999999999999876543
No 97
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=98.55 E-value=5.5e-08 Score=78.46 Aligned_cols=97 Identities=18% Similarity=0.203 Sum_probs=69.8
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCc--------------ccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHH
Q 021440 122 NGSFEKAKDAALAQDKWLLVNLQSTKEF--------------SSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKV 187 (312)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f--------------~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~ 187 (312)
..+|+++. .+.+|.+||+++++||. +|+.+...+ +.+.+-+..++.|..++.+.. ..+
T Consensus 10 ~~~f~~~~---~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~---~~l~~~~~~~~~~~~vd~d~~--~~l 81 (123)
T 1oaz_A 10 DDSFDTDV---LKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPIL---DEIADEYQGKLTVAKLNIDQN--PGT 81 (123)
T ss_dssp STTHHHHT---TSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHH---TTC-------CEEEEEETTSC--TTT
T ss_pred hhhHHHHH---HhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHH---HHHHHHhcCCeEEEEEECCCC--HHH
Confidence 34565443 46799999999999999 777776532 223333445788998887753 468
Q ss_pred HHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHH
Q 021440 188 CSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLP 228 (312)
Q Consensus 188 ~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~ 228 (312)
+..|++..+|+++++ + .|+.+..+.|..+++++.+.|.+
T Consensus 82 ~~~~~v~~~Pt~~~~-~-~G~~~~~~~G~~~~~~l~~~l~~ 120 (123)
T 1oaz_A 82 APKYGIRGIPTLLLF-K-NGEVAATKVGALSKGQLKEFLDA 120 (123)
T ss_dssp GGGGTCCBSSEEEEE-E-SSSEEEEEESCCCHHHHHHHHTT
T ss_pred HHHcCCCccCEEEEE-E-CCEEEEEEeCCCCHHHHHHHHHH
Confidence 889999999999999 3 69999889999988887766654
No 98
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=98.55 E-value=3.8e-07 Score=75.56 Aligned_cols=91 Identities=5% Similarity=0.063 Sum_probs=72.1
Q ss_pred cCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCCCCeeEE---
Q 021440 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKIC--- 211 (312)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdprTGe~v~--- 211 (312)
.+|++||+++.+||.+|+.+...+ +++.+-...++.|..++.+.. ..++..|++..+|++.++. .|+.+.
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~p~l---~~l~~~~~~~v~~~~vd~d~~--~~~~~~~~i~~~Pt~~~~~--~G~~v~~~~ 94 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMDEVL---YSIAEKVKNFAVIYLVDITEV--PDFNKMYELYDPCTVMFFF--RNKHIMIDL 94 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHH---HHHHHHHTTTEEEEEEETTTC--CTTTTSSCSCSSCEEEEEE--TTEEEEEEC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHH---HHHHHHhCCCeEEEEEccccC--HHHHHHcCCCCCCEEEEEE--CCcEEEEec
Confidence 689999999999999999997654 344444556799999987743 4578899999999999996 488776
Q ss_pred ------EecCCCC-hHHHHHHHHHHHhh
Q 021440 212 ------SWCGMIN-PQPLGEMLLPFMDR 232 (312)
Q Consensus 212 ------~~~G~~~-~~~fl~~L~~fl~~ 232 (312)
.+.|.++ .++|++.|.+.+..
T Consensus 95 g~~~~~~~~g~~~~~~~l~~~i~~~~~~ 122 (142)
T 1qgv_A 95 GTGNNNKINWAMEDKQEMVDIIETVYRG 122 (142)
T ss_dssp C------CCSCCSCHHHHHHHHHHHHHH
T ss_pred CCCCcceeeeecCcHHHHHHHHHHHHHH
Confidence 3556664 88999999888865
No 99
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=97.95 E-value=8.8e-09 Score=78.44 Aligned_cols=93 Identities=20% Similarity=0.182 Sum_probs=72.4
Q ss_pred HHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCCCCee
Q 021440 130 DAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQK 209 (312)
Q Consensus 130 ~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdprTGe~ 209 (312)
..+.+.+|+++|+++++||..|+.+.+.+ ..+.+.+..++.|..++.+ +...++..|++..+|++.++ +.|+.
T Consensus 13 ~~~~~~~~~~~v~f~~~~C~~C~~~~~~~---~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~v~~~Pt~~~~--~~g~~ 85 (106)
T 2yj7_A 13 QEVLKSDKPVLVDFWAPWCGPCRMIAPII---EELAKEYEGKVKVVKVNVD--ENPNTAAQYGIRSIPTLLLF--KNGQV 85 (106)
Confidence 33457789999999999999999997654 4455555557778877655 45578899999999999999 36888
Q ss_pred EEEecCCCChHHHHHHHHHH
Q 021440 210 ICSWCGMINPQPLGEMLLPF 229 (312)
Q Consensus 210 v~~~~G~~~~~~fl~~L~~f 229 (312)
+..+.|..+.+++.+.|.+.
T Consensus 86 ~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 86 VDRLVGAQPKEALKERIDKH 105 (106)
Confidence 88889988888777766554
No 100
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=98.54 E-value=4.5e-07 Score=71.90 Aligned_cols=97 Identities=12% Similarity=0.099 Sum_probs=72.8
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc--cEEEEEeccCChhHHHHHHhcCCCCCCe
Q 021440 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDSIPA 198 (312)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~--nFIfwq~~~ds~EG~~~~~~Y~~~~~P~ 198 (312)
-..+|++.+.. ..+|.++|+++++||.+|+.+... +.++.++ ++.|..++.+. +...++..|++..+|+
T Consensus 24 ~~~~~~~~~~~--~~~~~~vv~f~a~wC~~C~~~~~~------l~~~~~~~~~~~~~~vd~~~-~~~~~~~~~~v~~~Pt 94 (124)
T 1faa_A 24 NKDTFWPIVKA--AGDKPVVLDMFTQWCGPCKAMAPK------YEKLAEEYLDVIFLKLDCNQ-ENKTLAKELGIRVVPT 94 (124)
T ss_dssp CTTTHHHHHHH--TTTSCEEEEEECTTCHHHHHHHHH------HHHHHHHCTTSEEEEEECSS-TTHHHHHHHCCSSSSE
T ss_pred cchhHHHHHHh--cCCCEEEEEEECCcCHhHHHHhHH------HHHHHHHCCCCEEEEEecCc-chHHHHHHcCCCeeeE
Confidence 35567776653 478999999999999999999754 3444433 47888887653 3467889999999999
Q ss_pred EEEEeCCCCeeEEEecCCCChHHHHHHHHHH
Q 021440 199 VLVIDPITGQKICSWCGMINPQPLGEMLLPF 229 (312)
Q Consensus 199 i~IIdprTGe~v~~~~G~~~~~~fl~~L~~f 229 (312)
++|+. .|+.+..+.|.. ++++.+.|.+.
T Consensus 95 ~~~~~--~G~~~~~~~G~~-~~~l~~~i~~~ 122 (124)
T 1faa_A 95 FKILK--ENSVVGEVTGAK-YDKLLEAIQAA 122 (124)
T ss_dssp EEEEE--TTEEEEEEESSC-HHHHHHHHHHH
T ss_pred EEEEe--CCcEEEEEcCCC-HHHHHHHHHHh
Confidence 76653 699988889975 77777666654
No 101
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=98.53 E-value=2.8e-07 Score=71.69 Aligned_cols=97 Identities=14% Similarity=0.096 Sum_probs=71.7
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc--cEEEEEeccCChhHHHHHHhcCCCCCCeE
Q 021440 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDSIPAV 199 (312)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~--nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i 199 (312)
..+|++++.. ..+|.+||+++++||..|+.+... +.++.++ ++.|..++.+. +...++..|++..+|++
T Consensus 12 ~~~~~~~~~~--~~~~~vlv~f~a~wC~~C~~~~~~------l~~~~~~~~~v~~~~vd~~~-~~~~~~~~~~v~~~Pt~ 82 (111)
T 2pu9_C 12 KDTFWPIVKA--AGDKPVVLDMFTQWCGPSKAMAPK------YEKLAEEYLDVIFLKLDCNQ-ENKTLAKELGIRVVPTF 82 (111)
T ss_dssp TTTHHHHHTT--CTTSCEEEEEECTTCHHHHHHHHH------HHHHHHHCTTSEEEEEECSS-TTHHHHHHHCCSBSSEE
T ss_pred hHHHHHHHHh--cCCCEEEEEEECCcCHhHHHHCHH------HHHHHHHCCCeEEEEEecCc-chHHHHHHcCCCeeeEE
Confidence 4567776642 258999999999999999999754 3444332 48888887763 34578899999999995
Q ss_pred EEEeCCCCeeEEEecCCCChHHHHHHHHHHH
Q 021440 200 LVIDPITGQKICSWCGMINPQPLGEMLLPFM 230 (312)
Q Consensus 200 ~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl 230 (312)
+ +++ .|+.+..+.|. .++++.+.|.+++
T Consensus 83 ~-~~~-~G~~~~~~~G~-~~~~l~~~l~~~~ 110 (111)
T 2pu9_C 83 K-ILK-ENSVVGEVTGA-KYDKLLEAIQAAR 110 (111)
T ss_dssp E-EES-SSSEEEEEESS-CHHHHHHHHHHHH
T ss_pred E-EEe-CCcEEEEEcCC-CHHHHHHHHHHhh
Confidence 4 554 69988888997 4777777776654
No 102
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=98.52 E-value=3.9e-07 Score=74.30 Aligned_cols=98 Identities=13% Similarity=0.033 Sum_probs=74.3
Q ss_pred HHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhh-ccEEEEEeccC--Ch-------------------hHHHHHHh
Q 021440 133 LAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS-VNFIFWQEYDD--TS-------------------EGWKVCSF 190 (312)
Q Consensus 133 k~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~-~nFIfwq~~~d--s~-------------------EG~~~~~~ 190 (312)
.-++|++||++.++||..|+.+...+ ..+.+-+. .++.++.++.+ +. ....++..
T Consensus 25 ~~~gk~~lv~f~~~~C~~C~~~~~~l---~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 101 (153)
T 2l5o_A 25 DLQGKVTLINFWFPSCPGCVSEMPKI---IKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQA 101 (153)
T ss_dssp HHTTCEEEEEEECTTCTTHHHHHHHH---HHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHH
T ss_pred HhCCCEEEEEEECCCCccHHHHHHHH---HHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHH
Confidence 34789999999999999999886543 12333333 35777666532 21 23467888
Q ss_pred cCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhCC
Q 021440 191 YNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRSP 234 (312)
Q Consensus 191 Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~~~ 234 (312)
|.+..+|++.|||+ .|+.+..+.|..+++++.+.|.+.|....
T Consensus 102 ~~i~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~l~~ll~~~~ 144 (153)
T 2l5o_A 102 FGTQVYPTSVLIGK-KGEILKTYVGEPDFGKLYQEIDTAWRNSD 144 (153)
T ss_dssp HTCCSSSEEEEECS-SSCCCEEEESSCCHHHHHHHHHHHHHCCS
T ss_pred cCCCccCeEEEECC-CCcEEEEEcCCCCHHHHHHHHHHHHHhhh
Confidence 99999999999997 69988889999999999999999987654
No 103
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=98.50 E-value=9.5e-08 Score=78.95 Aligned_cols=97 Identities=15% Similarity=0.050 Sum_probs=68.4
Q ss_pred HHHcCCeEEEEeecCCCcccchhhccc-------------------------CCCHHHHHHhhc-cEEEEEeccCChhHH
Q 021440 132 ALAQDKWLLVNLQSTKEFSSLMLNRDT-------------------------WGNEAVSQIISV-NFIFWQEYDDTSEGW 185 (312)
Q Consensus 132 Ak~~~KwLLVniq~~~~f~c~~lnRDv-------------------------w~~~~V~~~i~~-nFIfwq~~~ds~EG~ 185 (312)
+..++|++||++.++||.+|+.+...+ -..+.+++|+++ ++-+|.+..+ +..
T Consensus 34 ~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d--~~~ 111 (164)
T 2h30_A 34 YLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYPKLPVVTD--NGG 111 (164)
T ss_dssp GCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCTTSCEEEC--TTC
T ss_pred HHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCCcceEEEc--Cch
Confidence 334689999999999999999864321 112344444444 2322333332 234
Q ss_pred HHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021440 186 KVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (312)
Q Consensus 186 ~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~ 231 (312)
.++..|++..+|++.|||+ .|+.+..+.|..+.+++.+.|.+.+.
T Consensus 112 ~~~~~~~v~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 112 TIAQNLNISVYPSWALIGK-DGDVQRIVKGSINEAQALALIRNPNA 156 (164)
T ss_dssp HHHHHTTCCSSSEEEEECT-TSCEEEEEESCCCHHHHHHHHHCTTC
T ss_pred HHHHHcCCCccceEEEECC-CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 6888999999999999997 69999999999998887777766553
No 104
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=98.50 E-value=1.6e-07 Score=77.21 Aligned_cols=94 Identities=16% Similarity=0.174 Sum_probs=71.7
Q ss_pred HHHcCCeEEEEeecCCCcccchh-hcccCCCHHHHHHhh----ccEEEEEeccC-------Ch-----------------
Q 021440 132 ALAQDKWLLVNLQSTKEFSSLML-NRDTWGNEAVSQIIS----VNFIFWQEYDD-------TS----------------- 182 (312)
Q Consensus 132 Ak~~~KwLLVniq~~~~f~c~~l-nRDvw~~~~V~~~i~----~nFIfwq~~~d-------s~----------------- 182 (312)
+.-.+|++||++..+||.+|+.. - +.+.++.+ .++.|+.++.+ +.
T Consensus 24 ~~~~gk~vlv~f~a~wC~~C~~~~~------~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (158)
T 3eyt_A 24 ADLRGKVIVIEAFQMLCPGCVMHGI------PLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVG 97 (158)
T ss_dssp GGGTTSEEEEEEECTTCHHHHHTHH------HHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEE
T ss_pred HHhCCCEEEEEEECCcCcchhhhhh------HHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEE
Confidence 33458999999999999999984 3 23333333 35777776643 11
Q ss_pred ---hHH----HHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021440 183 ---EGW----KVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (312)
Q Consensus 183 ---EG~----~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~ 232 (312)
++. .++..|++..+|++.|||+ .|+.+..+.|..+.+++.+.|.+.|.+
T Consensus 98 ~d~~~~~~~~~~~~~~~v~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~i~~ll~~ 153 (158)
T 3eyt_A 98 VDQPGDGAMPRTMAAYQMRGTPSLLLIDK-AGDLRAHHFGDVSELLLGAEIATLLGE 153 (158)
T ss_dssp EECCCSSSSCHHHHHTTCCSSSEEEEECT-TSEEEEEEESCCCHHHHHHHHHHHHTS
T ss_pred EcCccchhhHHHHHHcCCCCCCEEEEECC-CCCEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 111 5788999999999999997 699999999999999999999998864
No 105
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=98.48 E-value=5.8e-07 Score=73.36 Aligned_cols=98 Identities=14% Similarity=0.126 Sum_probs=70.4
Q ss_pred HcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc-cEEEEEeccCCh--hH-------------------HHHHHhc
Q 021440 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV-NFIFWQEYDDTS--EG-------------------WKVCSFY 191 (312)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~-nFIfwq~~~ds~--EG-------------------~~~~~~Y 191 (312)
-.+|++||++.++||..|+.+-..+ ..+.+-+.+ ++.|+.++.+.. +. ..++..|
T Consensus 26 ~~gk~vll~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 102 (154)
T 3kcm_A 26 LKGQVVIVNFWATWCPPCREEIPSM---MRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLY 102 (154)
T ss_dssp GTTSEEEEEEECTTCHHHHHHHHHH---HHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHH
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHH---HHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHh
Confidence 3679999999999999999986654 333333333 677777777763 22 2377889
Q ss_pred CCCCCCeEEEEeCCCCeeEEEecCCC--ChHHHHHHHHHHHhhCCC
Q 021440 192 NMDSIPAVLVIDPITGQKICSWCGMI--NPQPLGEMLLPFMDRSPR 235 (312)
Q Consensus 192 ~~~~~P~i~IIdprTGe~v~~~~G~~--~~~~fl~~L~~fl~~~~~ 235 (312)
.+..+|++.|||+ .|+.+..+.|.. +.+++.+.|.+.....+.
T Consensus 103 ~v~~~P~~~lid~-~G~i~~~~~g~~~~~~~~l~~~l~~l~~~~~~ 147 (154)
T 3kcm_A 103 GTTGVPETFVIDR-HGVILKKVVGAMEWDHPEVIAFLNNELSKARE 147 (154)
T ss_dssp TCCSBCEEEEECT-TSBEEEEEESCCCTTSHHHHHHHHTC------
T ss_pred CCCCCCeEEEECC-CCcEEEEEcCCCccccHHHHHHHHHHHHHhhh
Confidence 9999999999997 699999999975 667888777776655443
No 106
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=98.48 E-value=5e-07 Score=80.71 Aligned_cols=118 Identities=15% Similarity=0.191 Sum_probs=88.1
Q ss_pred hhhcCCCccc--cccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc---cEEEEEeccCChhH
Q 021440 110 ASLYRPPFHV--MFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV---NFIFWQEYDDTSEG 184 (312)
Q Consensus 110 a~lfrPP~~l--~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~---nFIfwq~~~ds~EG 184 (312)
+.||.+.-.+ +-..+|++.+ .+.+|.+||+++++||.+|+.+...+ ..+.+-+.. ++.|..++.+..+.
T Consensus 5 ~~l~~~~~~v~~l~~~~f~~~i---~~~~~~vlv~F~a~wC~~C~~~~p~~---~~l~~~~~~~~~~v~~~~vd~~~~~~ 78 (244)
T 3q6o_A 5 SALYSPSDPLTLLQADTVRGAV---LGSRSAWAVEFFASWCGHCIAFAPTW---XALAEDVKAWRPALYLAALDCAEETN 78 (244)
T ss_dssp -CCSCTTSSSEEECTTTHHHHH---SSCSSEEEEEEECTTCHHHHHHHHHH---HHHHHHTGGGTTTEEEEEEETTSTTT
T ss_pred cCCCCCCCCceeCChhhHHHHH---hhCCCeEEEEEECCcCHHHHHHHHHH---HHHHHHHHhccCcEEEEEEeCCchhh
Confidence 3466544333 3355676655 45679999999999999999996433 444445554 79999999988888
Q ss_pred HHHHHhcCCCCCCeEEEEeCC--C--CeeEEEecCCCChHHHHHHHHHHHhhCCC
Q 021440 185 WKVCSFYNMDSIPAVLVIDPI--T--GQKICSWCGMINPQPLGEMLLPFMDRSPR 235 (312)
Q Consensus 185 ~~~~~~Y~~~~~P~i~IIdpr--T--Ge~v~~~~G~~~~~~fl~~L~~fl~~~~~ 235 (312)
..++..|++..+|++.++++- . |..+ .+.| .+++.+.+.|.+++..+..
T Consensus 79 ~~l~~~~~v~~~Pt~~~~~~g~~~~~g~~~-~~~g-~~~~~l~~~i~~~l~~~~~ 131 (244)
T 3q6o_A 79 SAVCRDFNIPGFPTVRFFXAFTXNGSGAVF-PVAG-ADVQTLRERLIDALESHHD 131 (244)
T ss_dssp HHHHHHTTCCSSSEEEEECTTCCSSSCEEC-CCTT-CCHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHcCCCccCEEEEEeCCCcCCCCeeE-ecCC-CCHHHHHHHHHHHHHhccc
Confidence 999999999999999999962 1 2323 4566 5899999999999987653
No 107
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=98.47 E-value=1.1e-06 Score=72.03 Aligned_cols=93 Identities=15% Similarity=0.188 Sum_probs=70.1
Q ss_pred cCCeEEEEeecCCCcccchhhcccCCCHHHHHHh-hccEEEEEeccCChh-----------------------HHHHHHh
Q 021440 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQII-SVNFIFWQEYDDTSE-----------------------GWKVCSF 190 (312)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i-~~nFIfwq~~~ds~E-----------------------G~~~~~~ 190 (312)
.+|++||++.++||..|+.+...+ ..+.+-+ ..++.++.++.+... ...++..
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l---~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 104 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYL---LKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLES 104 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHH---HHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHH
T ss_pred CCCEEEEEEECCCChhHHHHHHHH---HHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHH
Confidence 689999999999999999876543 2233333 345888888877532 4678889
Q ss_pred cCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhCC
Q 021440 191 YNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRSP 234 (312)
Q Consensus 191 Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~~~ 234 (312)
|.+..+|++.|||+ .|+.+..+ ++++++.+.|.+.+....
T Consensus 105 ~~v~~~P~~~lid~-~G~i~~~~---~~~~~l~~~l~~l~~~~~ 144 (152)
T 2lrn_A 105 YCIVGFPHIILVDP-EGKIVAKE---LRGDDLYNTVEKFVNGAK 144 (152)
T ss_dssp TTCCSSCEEEEECT-TSEEEEEC---CCTTHHHHHHHHHHTSSS
T ss_pred hCCCcCCeEEEECC-CCeEEEee---CCHHHHHHHHHHHHhhcc
Confidence 99999999999997 69988775 356778788887776543
No 108
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=98.47 E-value=9e-07 Score=72.05 Aligned_cols=99 Identities=11% Similarity=0.120 Sum_probs=70.9
Q ss_pred HHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHh-hccEEEEEeccCChhH--------------------HHHHHh
Q 021440 132 ALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQII-SVNFIFWQEYDDTSEG--------------------WKVCSF 190 (312)
Q Consensus 132 Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i-~~nFIfwq~~~ds~EG--------------------~~~~~~ 190 (312)
+..++|++||++.++||..|+.+...+ ..+.+-+ ..++.++.++.+.... ..++..
T Consensus 24 ~~~~gk~vll~f~~~~C~~C~~~~~~l---~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 100 (152)
T 3gl3_A 24 SDKTGSVVYLDFWASWCGPCRQSFPWM---NQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRL 100 (152)
T ss_dssp GGGTTSEEEEEEECTTCTHHHHHHHHH---HHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHH
T ss_pred HHhCCCEEEEEEECCcCHHHHHHHHHH---HHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHH
Confidence 445689999999999999999987654 2333333 3347777777774321 156778
Q ss_pred cCCCCCCeEEEEeCCCCeeEEEecCCCC--hHHHHHHHHHHHhhCC
Q 021440 191 YNMDSIPAVLVIDPITGQKICSWCGMIN--PQPLGEMLLPFMDRSP 234 (312)
Q Consensus 191 Y~~~~~P~i~IIdprTGe~v~~~~G~~~--~~~fl~~L~~fl~~~~ 234 (312)
|.+..+|++.|||+ .|+.+..+.|... .+++.+.|.+.+...+
T Consensus 101 ~~v~~~P~~~lid~-~G~i~~~~~g~~~~~~~~l~~~i~~~~~~~~ 145 (152)
T 3gl3_A 101 YGVKGMPTSFLIDR-NGKVLLQHVGFRPADKEALEQQILAALGGNE 145 (152)
T ss_dssp TTCCSSSEEEEECT-TSBEEEEEESCCTTTHHHHHHHHHHHTC---
T ss_pred cCCCCCCeEEEECC-CCCEEEEEccCCCcCHHHHHHHHHHHHcccc
Confidence 99999999999997 6999999999754 4677777776655443
No 109
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.46 E-value=6e-07 Score=71.51 Aligned_cols=96 Identities=5% Similarity=0.032 Sum_probs=71.5
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc-cEEEEEeccCChhHHHHHHhcCCCCCCeE
Q 021440 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV-NFIFWQEYDDTSEGWKVCSFYNMDSIPAV 199 (312)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~-nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i 199 (312)
-..+|++++. ++ +||+++++||..|+.+...+ ..+.+.+.. ++.|..++.+. ...++..|++..+|++
T Consensus 13 ~~~~f~~~~~-----~~-vlv~f~a~wC~~C~~~~p~~---~~~~~~~~~~~v~~~~vd~~~--~~~~~~~~~v~~~Pt~ 81 (126)
T 1x5e_A 13 TDENWRELLE-----GD-WMIEFYAPWCPACQNLQPEW---ESFAEWGEDLEVNIAKVDVTE--QPGLSGRFIINALPTI 81 (126)
T ss_dssp CTTTHHHHTS-----SE-EEEEEECSSCHHHHHHHHHH---HHHHHHHGGGTCEEEEEETTT--CHHHHHHTTCCSSSEE
T ss_pred cHHHHHHHhC-----CC-EEEEEECCCCHHHHHHhHHH---HHHHHHhccCCeEEEEEECcC--CHHHHHHcCCcccCEE
Confidence 3456776542 23 89999999999999997654 334444443 78899887764 4568899999999999
Q ss_pred EEEeCCCCeeEEEecCCCChHHHHHHHHHHH
Q 021440 200 LVIDPITGQKICSWCGMINPQPLGEMLLPFM 230 (312)
Q Consensus 200 ~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl 230 (312)
+++. .|+ +..+.|..+.++|.+.|.+.+
T Consensus 82 ~~~~--~G~-~~~~~G~~~~~~l~~~l~~~~ 109 (126)
T 1x5e_A 82 YHCK--DGE-FRRYQGPRTKKDFINFISDKE 109 (126)
T ss_dssp EEEE--TTE-EEECCSCCCHHHHHHHHHTCG
T ss_pred EEEe--CCe-EEEeecCCCHHHHHHHHHHHh
Confidence 9993 588 577899888888776666554
No 110
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.44 E-value=4.8e-07 Score=73.52 Aligned_cols=91 Identities=8% Similarity=0.046 Sum_probs=70.1
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc-cEEEEEeccCChhHHHHHHhcCCC------
Q 021440 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV-NFIFWQEYDDTSEGWKVCSFYNMD------ 194 (312)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~-nFIfwq~~~ds~EG~~~~~~Y~~~------ 194 (312)
..+|++++ ++.++|++||+++++||.+|+.+...+ ..+.+-++. ++.|..++.+. ...++..|++.
T Consensus 14 ~~~f~~~~--~~~~~~~vlv~f~a~wC~~C~~~~p~~---~~l~~~~~~~~v~~~~vd~~~--~~~~~~~~~v~~~~~~~ 86 (137)
T 2dj0_A 14 DKTIDEEL--ERDKRVTWIVEFFANWSNDCQSFAPIY---ADLSLKYNCTGLNFGKVDVGR--YTDVSTRYKVSTSPLTK 86 (137)
T ss_dssp TTHHHHHH--HHSTTSCEEEEECCTTCSTTTTTHHHH---HHHHHHHCSSSCEEEECCTTT--CHHHHHHTTCCCCSSSS
T ss_pred HhhHHHHH--hcCCCCEEEEEEECCCCHHHHHHHHHH---HHHHHHhCCCCeEEEEEeCcc--CHHHHHHccCcccCCcC
Confidence 45688877 455678999999999999999997644 344444443 79999887664 45688999998
Q ss_pred CCCeEEEEeCCCCeeEEEecCCCChHH
Q 021440 195 SIPAVLVIDPITGQKICSWCGMINPQP 221 (312)
Q Consensus 195 ~~P~i~IIdprTGe~v~~~~G~~~~~~ 221 (312)
.+|++.++. .|+.+..+.|..+.++
T Consensus 87 ~~Pt~~~~~--~G~~~~~~~G~~~~~~ 111 (137)
T 2dj0_A 87 QLPTLILFQ--GGKEAMRRPQIDKKGR 111 (137)
T ss_dssp CSSEEEEES--SSSEEEEESCBCSSSC
T ss_pred CCCEEEEEE--CCEEEEEecCcCchHH
Confidence 999999994 5998888888765543
No 111
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.43 E-value=1.5e-06 Score=73.70 Aligned_cols=94 Identities=20% Similarity=0.191 Sum_probs=70.9
Q ss_pred cCCeEEEEeecCCCcccchhhcccCCCHHHHHHhh-ccEEEEEeccCCh---hHHHHHHhcCCC----------------
Q 021440 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS-VNFIFWQEYDDTS---EGWKVCSFYNMD---------------- 194 (312)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~-~nFIfwq~~~ds~---EG~~~~~~Y~~~---------------- 194 (312)
++||+||++..+||..|+.+...+ ..+.+-++ .++.++.++.+.. ...+++..|++.
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l---~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 135 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPAL---DELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDL 135 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHH---HHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHH
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHH---HHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHh
Confidence 579999999999999999886554 23333333 5777777777653 345677777663
Q ss_pred -------CCCeEEEEeCCCCeeEEEecCCCC--hHHHHHHHHHHHhh
Q 021440 195 -------SIPAVLVIDPITGQKICSWCGMIN--PQPLGEMLLPFMDR 232 (312)
Q Consensus 195 -------~~P~i~IIdprTGe~v~~~~G~~~--~~~fl~~L~~fl~~ 232 (312)
.+|++.|||+ .|+.+..+.|..+ .+++.+.|...+.+
T Consensus 136 ~~~~~~~~~P~~~lid~-~G~i~~~~~g~~~~~~~~l~~~l~~ll~~ 181 (186)
T 1jfu_A 136 KAIGRALGMPTSVLVDP-QGCEIATIAGPAEWASEDALKLIRAATGK 181 (186)
T ss_dssp HTTTCCSSSSEEEEECT-TSBEEEEEESCCCTTSHHHHHHHHHHHC-
T ss_pred ccccccCCCCEEEEECC-CCCEEEEEecCCccCHHHHHHHHHHHhcc
Confidence 7999999997 6999999999764 78888888887754
No 112
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=98.43 E-value=2.4e-07 Score=72.90 Aligned_cols=88 Identities=9% Similarity=0.093 Sum_probs=67.9
Q ss_pred HcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc-----cEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCCCCe
Q 021440 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV-----NFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQ 208 (312)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~-----nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdprTGe 208 (312)
..+|.+||+++++||..|+.+...+ ..+.+-++. ++.|..++.+..+ ++. ++..+|++.++++ .|+
T Consensus 23 ~~~~~vlv~f~a~wC~~C~~~~p~~---~~~~~~~~~~~~~~~v~~~~vd~~~~~---~~~--~v~~~Pt~~~~~~-~~~ 93 (121)
T 2djj_A 23 DDTKDVLIEFYAPWCGHCKALAPKY---EELGALYAKSEFKDRVVIAKVDATAND---VPD--EIQGFPTIKLYPA-GAK 93 (121)
T ss_dssp CTTSCEEEEEECSSCTTHHHHHHHH---HHHHHHHTTSSCTTSSEEEEEETTTSC---CSS--CCSSSSEEEEECS-SCT
T ss_pred cCCCCEEEEEECCCCHhHHHhhHHH---HHHHHHHhhcccCCceEEEEEECcccc---ccc--ccCcCCeEEEEeC-cCC
Confidence 4689999999999999999998754 456666655 7899999887654 444 8899999999986 344
Q ss_pred e-EEEecCCCChHHHHHHHHHHH
Q 021440 209 K-ICSWCGMINPQPLGEMLLPFM 230 (312)
Q Consensus 209 ~-v~~~~G~~~~~~fl~~L~~fl 230 (312)
. +..+.|..+.++|.+.|.+.+
T Consensus 94 ~~~~~~~G~~~~~~l~~~i~~~~ 116 (121)
T 2djj_A 94 GQPVTYSGSRTVEDLIKFIAENG 116 (121)
T ss_dssp TSCCCCCCCSCHHHHHHHHHHTS
T ss_pred CCceEecCCCCHHHHHHHHHhcc
Confidence 2 667889888888776666543
No 113
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.42 E-value=3.4e-07 Score=74.93 Aligned_cols=99 Identities=17% Similarity=0.243 Sum_probs=70.2
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc--cEEEEEeccCChhHHHHHHhcCCCCCCe
Q 021440 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDSIPA 198 (312)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~--nFIfwq~~~ds~EG~~~~~~Y~~~~~P~ 198 (312)
-..+|.+++..+ ..+|++||+++.+||.+|+.|.. .+.++.++ ++.|+.++.+... ..|++..+|+
T Consensus 16 ~~~~~~~~v~~~-~~~~~vvv~f~a~wC~~C~~~~p------~l~~la~~~~~v~~~~vd~~~~~-----~~~~i~~~Pt 83 (135)
T 2dbc_A 16 SGNQYVNEVTNA-EKDLWVVIHLYRSSVPMCLVVNQ------HLSVLARKFPETKFVKAIVNSCI-----EHYHDNCLPT 83 (135)
T ss_dssp CHHHHHHHTTTC-CSSCEEEEEECCTTCHHHHHHHH------HHHHHHHHCSSEEEEEECCSSSC-----SSCCSSCCSE
T ss_pred CHHHHHHHHHhc-CCCCEEEEEEECCCChHHHHHHH------HHHHHHHHCCCcEEEEEEhhcCc-----ccCCCCCCCE
Confidence 344566666544 34689999999999999999964 44555544 4788888877642 6899999999
Q ss_pred EEEEeCCCCeeEEEecCCCChH---HHHHHHHHHHhhC
Q 021440 199 VLVIDPITGQKICSWCGMINPQ---PLGEMLLPFMDRS 233 (312)
Q Consensus 199 i~IIdprTGe~v~~~~G~~~~~---~fl~~L~~fl~~~ 233 (312)
++++. .|+.+..+.|..+.. --.+.|..+|.++
T Consensus 84 ~~~~~--~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 84 IFVYK--NGQIEGKFIGIIECGGINLKLEELEWKLSEV 119 (135)
T ss_dssp EEEES--SSSCSEEEESTTTTTCTTCCHHHHHHHHHHH
T ss_pred EEEEE--CCEEEEEEEeEEeeCCCcCCHHHHHHHHHHc
Confidence 99996 699888888875211 0234466666554
No 114
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=98.41 E-value=6.7e-07 Score=83.27 Aligned_cols=100 Identities=16% Similarity=0.182 Sum_probs=79.1
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEEE
Q 021440 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVI 202 (312)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~II 202 (312)
.+|++++ ++.+|++||+++++||.+|+.|...+ ..+.+.++..+.|..++.+..+...++..|++..+|++.++
T Consensus 25 ~~f~~~i---~~~~~~vlV~F~A~wC~~C~~~~p~~---~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~~Pt~~~~ 98 (298)
T 3ed3_A 25 KSFDKAI---HNTNYTSLVEFYAPWCGHCKKLSSTF---RKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGFPTLMVF 98 (298)
T ss_dssp HHHHHHH---TSSSSCEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCBSSEEEEE
T ss_pred HHHHHHH---HhCCCeEEEEEECCCCHHHHHHHHHH---HHHHHHccCCcEEEEEEccCccCHHHHHhCCCCccceEEEE
Confidence 3466665 35689999999999999999997654 45666666678888888888788899999999999999999
Q ss_pred eCCCCe-----------------eEEEecCCCChHHHHHHHHHHH
Q 021440 203 DPITGQ-----------------KICSWCGMINPQPLGEMLLPFM 230 (312)
Q Consensus 203 dprTGe-----------------~v~~~~G~~~~~~fl~~L~~fl 230 (312)
++ |+ ....+.|..+.+.+++-|.+.+
T Consensus 99 ~~--g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~ 141 (298)
T 3ed3_A 99 RP--PKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRI 141 (298)
T ss_dssp EC--CCC-------------CCCEEEECCSCCSHHHHHHHHHTTC
T ss_pred EC--CceeecccccccccccccccceeecCCcCHHHHHHHHHHhc
Confidence 86 44 3567899888888766665544
No 115
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.41 E-value=1.8e-06 Score=71.11 Aligned_cols=95 Identities=16% Similarity=0.102 Sum_probs=71.4
Q ss_pred cCCeEEEEeecCCCcc-cchhhcccCCCHHHHHHhhc-----cEEEEEeccCC----h----------------------
Q 021440 135 QDKWLLVNLQSTKEFS-SLMLNRDTWGNEAVSQIISV-----NFIFWQEYDDT----S---------------------- 182 (312)
Q Consensus 135 ~~KwLLVniq~~~~f~-c~~lnRDvw~~~~V~~~i~~-----nFIfwq~~~ds----~---------------------- 182 (312)
.+||+||++..+||.+ |...-..+ ..+.+-+++ ++.++.++.|. +
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l---~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d 98 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKM---IQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTRE 98 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHH---HHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHH---HHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHH
Confidence 5899999999999998 98764432 223333332 66666666553 1
Q ss_pred hHHHHHHhcCCCCCC---------------eEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhC
Q 021440 183 EGWKVCSFYNMDSIP---------------AVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRS 233 (312)
Q Consensus 183 EG~~~~~~Y~~~~~P---------------~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~~ 233 (312)
....+++.|++...| ++.|||+ .|+.+..+.|..+++++.+.|.+.|..+
T Consensus 99 ~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~-~G~i~~~~~g~~~~~~l~~~l~~ll~~~ 163 (164)
T 2ggt_A 99 EVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGP-DGEFLDYFGQNKRKGEIAASIATHMRPY 163 (164)
T ss_dssp HHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECT-TSCEEEEEETTCCHHHHHHHHHHHHGGG
T ss_pred HHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECC-CCeEEEEeCCCCCHHHHHHHHHHHHHhc
Confidence 123577888888888 8999997 6999999999999999999999988764
No 116
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=98.40 E-value=7.9e-07 Score=72.71 Aligned_cols=90 Identities=14% Similarity=0.110 Sum_probs=68.9
Q ss_pred CeEEEEeecCCCcccchhhcccCCCHHHHHHhhc-cEEEEEecc---CC----------------------hhHHHHHHh
Q 021440 137 KWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV-NFIFWQEYD---DT----------------------SEGWKVCSF 190 (312)
Q Consensus 137 KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~-nFIfwq~~~---ds----------------------~EG~~~~~~ 190 (312)
|++||++.++||..|+.+...+ .++.++ ++.|+.++. ++ .+...++..
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l------~~l~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 104 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGL------HRVAEETGVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAAR 104 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHH------HHHHHHHCCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTT
T ss_pred CeEEEEEEcccChhHHHHHHHH------HHHHHHcCCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHH
Confidence 9999999999999999986554 333322 555555555 22 145678889
Q ss_pred cCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhC
Q 021440 191 YNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRS 233 (312)
Q Consensus 191 Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~~ 233 (312)
|.+..+|++.|||+ .|+.+..+.|..+++++.+.|.+.+...
T Consensus 105 ~~v~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~l~~~~~~~ 146 (154)
T 3ia1_A 105 FKVLGQPWTFVVDR-EGKVVALFAGRAGREALLDALLLAGADL 146 (154)
T ss_dssp SSBCSSCEEEEECT-TSEEEEEEESBCCHHHHHHHHHHTTCCC
T ss_pred hCCCcccEEEEECC-CCCEEEEEcCCCCHHHHHHHHHhccCcc
Confidence 99999999999997 6999999999999998887777765443
No 117
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=98.38 E-value=2.6e-06 Score=74.41 Aligned_cols=92 Identities=12% Similarity=0.021 Sum_probs=71.6
Q ss_pred HHHcCCeE-EEEeecCCCcccchhhcccCCCHHHHHHhh----ccEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCCC
Q 021440 132 ALAQDKWL-LVNLQSTKEFSSLMLNRDTWGNEAVSQIIS----VNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPIT 206 (312)
Q Consensus 132 Ak~~~KwL-LVniq~~~~f~c~~lnRDvw~~~~V~~~i~----~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdprT 206 (312)
.+..++.+ ||+++++||.+|+.+...+ ..+.+-.. .++.|..++.+ +...++..|++..+|+++|+. .
T Consensus 129 ~~~~~~~~~~v~F~a~wC~~C~~~~p~~---~~l~~~~~~~~~~~v~~~~vd~~--~~~~l~~~~~v~~~Pt~~~~~--~ 201 (226)
T 1a8l_A 129 IRNIDQDVRILVFVTPTCPYCPLAVRMA---HKFAIENTKAGKGKILGDMVEAI--EYPEWADQYNVMAVPKIVIQV--N 201 (226)
T ss_dssp HTTCCSCEEEEEEECSSCTTHHHHHHHH---HHHHHHHHHTTCCCEEEEEEEGG--GCHHHHHHTTCCSSCEEEEEE--T
T ss_pred HHhcCCCcEEEEEeCCCCCccHHHHHHH---HHHHHhcccccCCcEEEEEEEcc--cCHHHHHhCCCcccCeEEEEe--C
Confidence 34444555 9999999999999997543 34444444 47888888765 455688999999999988875 6
Q ss_pred CeeEEEecCCCChHHHHHHHHHHH
Q 021440 207 GQKICSWCGMINPQPLGEMLLPFM 230 (312)
Q Consensus 207 Ge~v~~~~G~~~~~~fl~~L~~fl 230 (312)
|+.+..+.|..+.++|.+.|.+.+
T Consensus 202 G~~~~~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 202 GEDRVEFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp TEEEEEEESCCCHHHHHHHHHHHH
T ss_pred CceeEEEcCCCCHHHHHHHHHHhh
Confidence 888888999999998888887765
No 118
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.37 E-value=1.8e-06 Score=75.69 Aligned_cols=101 Identities=10% Similarity=0.152 Sum_probs=78.6
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhcc---EEEEEeccCChhHHHHHHhcCCCCCC
Q 021440 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVN---FIFWQEYDDTSEGWKVCSFYNMDSIP 197 (312)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~n---FIfwq~~~ds~EG~~~~~~Y~~~~~P 197 (312)
-..+|++++ .++|.+||+++++||.+|+.+...+ ..+.+-++.. +.|..++.+. ...++..|++..+|
T Consensus 21 ~~~~~~~~~----~~~~~v~v~F~a~wC~~C~~~~p~~---~~~~~~~~~~~~~~~~~~vd~~~--~~~l~~~~~v~~~P 91 (241)
T 3idv_A 21 NDANFDNFV----ADKDTVLLEFYAPWCGHCKQFAPEY---EKIANILKDKDPPIPVAKIDATS--ASVLASRFDVSGYP 91 (241)
T ss_dssp CTTTHHHHH----TTCSEEEEEEECTTCHHHHHHHHHH---HHHHHHHHTSSSCCCEEEEETTT--CHHHHHHTTCCSSS
T ss_pred cccCHHHHH----hcCCeEEEEEECCCCHHHHHhhHHH---HHHHHHHhhcCCceEEEEEeccC--CHHHHHhcCCCcCC
Confidence 345666655 5689999999999999999997644 3444444443 8888887664 45789999999999
Q ss_pred eEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhC
Q 021440 198 AVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRS 233 (312)
Q Consensus 198 ~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~~ 233 (312)
++.+++ .|+.+ .+.|..+.+++.+.+.+.+...
T Consensus 92 t~~~~~--~g~~~-~~~g~~~~~~l~~~i~~~~~~~ 124 (241)
T 3idv_A 92 TIKILK--KGQAV-DYEGSRTQEEIVAKVREVSQPD 124 (241)
T ss_dssp EEEEEE--TTEEE-ECCSCSCHHHHHHHHHHHHSTT
T ss_pred EEEEEc--CCCcc-cccCcccHHHHHHHHhhccCcc
Confidence 999997 37766 5889999999998888887653
No 119
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=98.37 E-value=2.5e-06 Score=71.86 Aligned_cols=99 Identities=11% Similarity=0.009 Sum_probs=81.8
Q ss_pred ccccccHHHHHHHHHHcCCeEEEEeecCC--CcccchhhcccCCCHHHHHHhhc---c-EEEEEeccCChhHHHHHHhcC
Q 021440 119 VMFNGSFEKAKDAALAQDKWLLVNLQSTK--EFSSLMLNRDTWGNEAVSQIISV---N-FIFWQEYDDTSEGWKVCSFYN 192 (312)
Q Consensus 119 l~~~gsf~~A~~~Ak~~~KwLLVniq~~~--~f~c~~lnRDvw~~~~V~~~i~~---n-FIfwq~~~ds~EG~~~~~~Y~ 192 (312)
.+-..+|++.+ ..++.+||++..+| |.+|++|. +-+.++.++ . +.|+.+|+| +...++..|+
T Consensus 21 ~~t~~~F~~~v----~~~~~vlVdF~a~~crCgpCk~ia------Pvleela~e~~g~~v~~~KVdvD--e~~~lA~~yg 88 (140)
T 2qgv_A 21 PVSESRLDDWL----TQAPDGVVLLSSDPKRTPEVSDNP------VMIGELLHEFPDYTWQVAIADLE--QSEAIGDRFG 88 (140)
T ss_dssp ECCHHHHHHHH----HTCSSEEEEECCCTTTCTTTTHHH------HHHHHHHTTCTTSCCEEEECCHH--HHHHHHHHHT
T ss_pred cCCHHHHHHHH----hCCCCEEEEEeCCcccCCcHHHHH------hHHHHHHHHcCCCeEEEEEEECC--CCHHHHHHcC
Confidence 44566788776 26788999999998 89999994 556666654 4 788887555 7789999999
Q ss_pred CCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021440 193 MDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (312)
Q Consensus 193 ~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~ 231 (312)
+.++|+++++- .|+.+.+..|..+.+++.+.|.+++.
T Consensus 89 V~sIPTlilFk--~G~~v~~~~G~~~k~~l~~~i~~~l~ 125 (140)
T 2qgv_A 89 AFRFPATLVFT--GGNYRGVLNGIHPWAELINLMRGLVE 125 (140)
T ss_dssp CCSSSEEEEEE--TTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred CccCCEEEEEE--CCEEEEEEecCCCHHHHHHHHHHHhc
Confidence 99999999997 59999999999999999999998884
No 120
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.36 E-value=6.7e-07 Score=71.62 Aligned_cols=93 Identities=9% Similarity=0.072 Sum_probs=69.5
Q ss_pred cCCeEEEEeecCCCcccchhhcccCCCHHHHHHhh--ccEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCCCCeeE-E
Q 021440 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS--VNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKI-C 211 (312)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~--~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdprTGe~v-~ 211 (312)
.+|.+||+++++||..|+.+...+ ..+.+-++ .+++|..++.+.. ..++..|++..+|+++++++ .|+.. .
T Consensus 24 ~~~~vlv~f~a~wC~~C~~~~p~~---~~~~~~~~~~~~~~~~~vd~~~~--~~~~~~~~v~~~Pt~~~~~~-g~~~~~~ 97 (133)
T 2dj3_A 24 PKKDVLIEFYAPWCGHCKQLEPIY---TSLGKKYKGQKDLVIAKMDATAN--DITNDQYKVEGFPTIYFAPS-GDKKNPI 97 (133)
T ss_dssp TTSEEEEEECCTTCSHHHHHHHHH---HHHHHHHTTSSSEEEEEECTTTS--CCCCSSCCCSSSSEEEEECT-TCTTSCE
T ss_pred CCCcEEEEEECCCChhHHHHHHHH---HHHHHHhcCCCCEEEEEecCCcC--HHHHhhcCCCcCCEEEEEeC-CCcccce
Confidence 589999999999999999997653 44555554 4699998876643 35667899999999999985 23321 2
Q ss_pred Eec-CCCChHHHHHHHHHHHhhC
Q 021440 212 SWC-GMINPQPLGEMLLPFMDRS 233 (312)
Q Consensus 212 ~~~-G~~~~~~fl~~L~~fl~~~ 233 (312)
.+. |..++++|.+.|.+.+...
T Consensus 98 ~~~gg~~~~~~l~~~l~~~~~~~ 120 (133)
T 2dj3_A 98 KFEGGNRDLEHLSKFIDEHATKR 120 (133)
T ss_dssp ECCSSCCSTTHHHHHHHHHSSSC
T ss_pred EecCCCcCHHHHHHHHHHhcccc
Confidence 366 6688998888888877543
No 121
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=98.36 E-value=4.8e-06 Score=69.85 Aligned_cols=112 Identities=6% Similarity=0.070 Sum_probs=83.8
Q ss_pred hHHHhhhcCCCccccccccHHHHHHHHHHcCCeEEEEeecCCC--cccchhhcccCCCHHHHHHhhc---cEEEEEeccC
Q 021440 106 HDILASLYRPPFHVMFNGSFEKAKDAALAQDKWLLVNLQSTKE--FSSLMLNRDTWGNEAVSQIISV---NFIFWQEYDD 180 (312)
Q Consensus 106 ~~~La~lfrPP~~l~~~gsf~~A~~~Ak~~~KwLLVniq~~~~--f~c~~lnRDvw~~~~V~~~i~~---nFIfwq~~~d 180 (312)
.++|...++-| .+-..+|++.+. +.++.+||+|..+|| .+|+++. +-+-++.++ .+.|+.+|+
T Consensus 8 ~~rl~~~~g~~--~vt~~~F~~~v~---~~~~~vlVdF~A~wCr~gpCk~ia------Pvleela~e~~~~v~~~KVdv- 75 (137)
T 2qsi_A 8 ARAAARPNAPT--LVDEATVDDFIA---HSGKIVVLFFRGDAVRFPEAADLA------VVLPELINAFPGRLVAAEVAA- 75 (137)
T ss_dssp ---------CE--EECTTTHHHHHH---TSSSEEEEEECCCTTTCTTHHHHH------HHHHHHHHTSTTTEEEEEECG-
T ss_pred HHHHHHhcCCc--ccCHhHHHHHHh---cCCCcEEEEEeCCccCCCchhhHH------hHHHHHHHHccCCcEEEEEEC-
Confidence 34555544443 345678988773 445699999999999 9999994 455555554 588998865
Q ss_pred ChhHHHHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021440 181 TSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (312)
Q Consensus 181 s~EG~~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~ 232 (312)
.+...++..|++.+.|++++.- .|+.+.+..|..+.+++.+.|.+.++.
T Consensus 76 -De~~~la~~ygV~siPTlilFk--dG~~v~~~vG~~~k~~l~~~l~~~l~~ 124 (137)
T 2qsi_A 76 -EAERGLMARFGVAVCPSLAVVQ--PERTLGVIAKIQDWSSYLAQIGAMLAE 124 (137)
T ss_dssp -GGHHHHHHHHTCCSSSEEEEEE--CCEEEEEEESCCCHHHHHHHHHHHHHH
T ss_pred -CCCHHHHHHcCCccCCEEEEEE--CCEEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 4678899999999999999997 599999999999999999999888843
No 122
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=98.35 E-value=1.6e-06 Score=87.06 Aligned_cols=119 Identities=13% Similarity=0.079 Sum_probs=93.2
Q ss_pred hhhcCCCccc--cccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc---cEEEEEeccCChhH
Q 021440 110 ASLYRPPFHV--MFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV---NFIFWQEYDDTSEG 184 (312)
Q Consensus 110 a~lfrPP~~l--~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~---nFIfwq~~~ds~EG 184 (312)
+.||.+...+ +-..+|++++ .+.+|.+||+++++||.+|+.+...+ +.+.+-++. ++.|..++.+..+.
T Consensus 5 ~~Ly~~~~~V~~Lt~~~f~~~v---~~~~k~vlV~FyA~WC~pCk~~~P~l---~~la~~~~~~~~~v~~~~VD~d~d~~ 78 (519)
T 3t58_A 5 SVLYSSSDPLTLLDADSVRPTV---LGSSSAWAVEFFASWCGHAIAFAPTW---KELANDVKDWRPALNLAVLDCAEETN 78 (519)
T ss_dssp CCSCCTTSSSEEECTTTHHHHH---SSCSSEEEEEEECTTSHHHHHHHHHH---HHHHHHHGGGTTTEEEEEEETTSGGG
T ss_pred cccCCCCCCcEECChHHHHHHH---HhCCCeEEEEEECCCCHHHHHHHHHH---HHHHHHhhCcCCcEEEEEEECCcccc
Confidence 3567555444 3355677655 34579999999999999999997654 555555555 79999999988888
Q ss_pred HHHHHhcCCCCCCeEEEEeCC--CCeeEEEecCCCChHHHHHHHHHHHhhCC
Q 021440 185 WKVCSFYNMDSIPAVLVIDPI--TGQKICSWCGMINPQPLGEMLLPFMDRSP 234 (312)
Q Consensus 185 ~~~~~~Y~~~~~P~i~IIdpr--TGe~v~~~~G~~~~~~fl~~L~~fl~~~~ 234 (312)
..++..|++..+|++.++++- .|+.+....|..+++.+.+.|.+++....
T Consensus 79 ~~l~~~~~V~~~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~ 130 (519)
T 3t58_A 79 SAVCREFNIAGFPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHR 130 (519)
T ss_dssp HHHHHHTTCCSBSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHcCCcccCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhcc
Confidence 999999999999999999961 35555556777899999999999998765
No 123
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=98.34 E-value=1.1e-06 Score=72.77 Aligned_cols=90 Identities=13% Similarity=0.109 Sum_probs=68.4
Q ss_pred cCCeEEEEeecCCCcccchhhcccCCCHHHHHHh-hccEEEEEeccCC-----------------hhHHHHHHhcCCCCC
Q 021440 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQII-SVNFIFWQEYDDT-----------------SEGWKVCSFYNMDSI 196 (312)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i-~~nFIfwq~~~ds-----------------~EG~~~~~~Y~~~~~ 196 (312)
++|++||++.++||..|+.+-..+ ..+.+-+ +.++.|+.++.+. .....++..|++..+
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l---~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 116 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSM---DRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRL 116 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHH---HHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHH---HHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCCc
Confidence 689999999999999999876544 2233333 3578888888776 224578899999999
Q ss_pred CeEEEEeCCCCeeEEEecCCC--ChHHHHHHHHH
Q 021440 197 PAVLVIDPITGQKICSWCGMI--NPQPLGEMLLP 228 (312)
Q Consensus 197 P~i~IIdprTGe~v~~~~G~~--~~~~fl~~L~~ 228 (312)
|++.|||+ .|+.+..+.|.. +..++++.+.+
T Consensus 117 P~~~lid~-~G~i~~~~~G~~~~~~~~~~~~~~~ 149 (158)
T 3hdc_A 117 PDTFIVDR-KGIIRQRVTGGIEWDAPKVVSYLKS 149 (158)
T ss_dssp SEEEEECT-TSBEEEEEESCCCTTSHHHHHHHHT
T ss_pred ceEEEEcC-CCCEEEEEeCCCccchHHHHHHHHh
Confidence 99999997 699999999975 55666655543
No 124
>3bq3_A Defective in cullin neddylation protein 1; ubiquitin, ubiquitination,SCF,cullin, E3 E2, cell cycle, protein degradation, ligase; 1.90A {Saccharomyces cerevisiae} PDB: 2is9_A* 3o2p_A 3o6b_A 3tdi_B 2l4e_A 2l4f_A
Probab=98.33 E-value=2.7e-07 Score=85.62 Aligned_cols=46 Identities=15% Similarity=0.299 Sum_probs=41.5
Q ss_pred chhhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCCC
Q 021440 5 SIDKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNEA 51 (312)
Q Consensus 5 s~~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~~~~ 51 (312)
...++++|.+||+| ||+++.+|++||+.++||||.|++.||+.+..
T Consensus 12 ~~~~~~~i~qF~~i-Tg~~~~~A~~~L~~~~WdLe~Al~~ff~~~~~ 57 (270)
T 3bq3_A 12 ASPEQEAIESFTSL-TKCDPKVSRKYLQRNHWNINYALNDYYDKEIG 57 (270)
T ss_dssp -CHHHHHHHHHHHH-HCCCHHHHHHHHHTTTTCHHHHHHHHHHHHCC
T ss_pred ccchHHHHHHHHHH-cCCCHHHHHHHHHHcCCCHHHHHHHHHhCccc
Confidence 34588899999999 89999999999999999999999999987653
No 125
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=98.32 E-value=2.3e-06 Score=70.73 Aligned_cols=90 Identities=19% Similarity=0.225 Sum_probs=67.3
Q ss_pred cCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHH---------------------HHHHhcCC
Q 021440 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGW---------------------KVCSFYNM 193 (312)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~---------------------~~~~~Y~~ 193 (312)
.+|++||++..+||.+|...-..+ .+-..+|-..++.++.++.|..+.. .++..|.+
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l--~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 111 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLAL--RELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNV 111 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHH--HHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTC
T ss_pred CCCEEEEEEEcCCChhhHHHHHHH--HHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCc
Confidence 579999999999999999765433 1122223334588888887765421 27789999
Q ss_pred CCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHH
Q 021440 194 DSIPAVLVIDPITGQKICSWCGMINPQPLGEMLL 227 (312)
Q Consensus 194 ~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~ 227 (312)
..+|++.|||+ .|+.+..+.|..+.++.+..+.
T Consensus 112 ~~~P~~~lid~-~G~i~~~~~g~~~~e~~~~~~~ 144 (152)
T 2lrt_A 112 TNLPSVFLVNR-NNELSARGENIKDLDEAIKKLL 144 (152)
T ss_dssp CSCSEEEEEET-TTEEEEETTTCSCHHHHHHHHH
T ss_pred ccCceEEEECC-CCeEEEecCCHHHHHHHHHHHH
Confidence 99999999997 6999999999888777666554
No 126
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.32 E-value=3.3e-06 Score=69.03 Aligned_cols=88 Identities=17% Similarity=0.204 Sum_probs=68.6
Q ss_pred cCCeEEEEeecCCCcc--cchhhcccCCCHHHHHHhh-----ccEEEEEeccCChh-----------------------H
Q 021440 135 QDKWLLVNLQSTKEFS--SLMLNRDTWGNEAVSQIIS-----VNFIFWQEYDDTSE-----------------------G 184 (312)
Q Consensus 135 ~~KwLLVniq~~~~f~--c~~lnRDvw~~~~V~~~i~-----~nFIfwq~~~ds~E-----------------------G 184 (312)
.+|++||++..+||.+ |+..-.. +.++.+ .++.|+.++.|... .
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~------l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~ 105 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSE------LREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLN 105 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHH------HHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGG
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHH------HHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccc
Confidence 6899999999999999 9987543 333332 34888888877653 3
Q ss_pred HHHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021440 185 WKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (312)
Q Consensus 185 ~~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~ 232 (312)
..++..|.+..+|++.|||+ .|+.+..+. +++++.+.|.+.+.+
T Consensus 106 ~~~~~~~~v~~~P~~~lid~-~G~i~~~~~---~~~~l~~~l~~ll~~ 149 (150)
T 3fw2_A 106 SEVAKQYSIYKIPANILLSS-DGKILAKNL---RGEELKKKIENIVEE 149 (150)
T ss_dssp CHHHHHTTCCSSSEEEEECT-TSBEEEESC---CHHHHHHHHHHHHHH
T ss_pred hHHHHHcCCCccCeEEEECC-CCEEEEccC---CHHHHHHHHHHHHhc
Confidence 47888999999999999997 699887753 788888888887754
No 127
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.29 E-value=5.9e-06 Score=68.58 Aligned_cols=95 Identities=12% Similarity=0.038 Sum_probs=71.7
Q ss_pred cCCeEEEEeecCCCcc-cchhhcccCCCHHHHHHhh-----ccEEEEEeccCC----hh---------------------
Q 021440 135 QDKWLLVNLQSTKEFS-SLMLNRDTWGNEAVSQIIS-----VNFIFWQEYDDT----SE--------------------- 183 (312)
Q Consensus 135 ~~KwLLVniq~~~~f~-c~~lnRDvw~~~~V~~~i~-----~nFIfwq~~~ds----~E--------------------- 183 (312)
.+||+||++..+||.+ |...-..+ ..+.+-++ .++.++.++.|. ++
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l---~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~ 101 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKL---VQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTK 101 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHH---HHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHH
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHH---HHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHH
Confidence 5799999999999998 98764332 22333332 367777776652 22
Q ss_pred -HHHHHHhcCCCCCC---------------eEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhC
Q 021440 184 -GWKVCSFYNMDSIP---------------AVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRS 233 (312)
Q Consensus 184 -G~~~~~~Y~~~~~P---------------~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~~ 233 (312)
...+++.|.+...| ++.|||+ .|+.+..+.|..+++++.+.|.+.+...
T Consensus 102 ~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~-~G~i~~~~~g~~~~~~l~~~l~~ll~~~ 166 (171)
T 2rli_A 102 QVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNP-DGLFTDYYGRSRSAEQISDSVRRHMAAF 166 (171)
T ss_dssp HHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECT-TSCEEEEEESSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECC-CCeEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 23577788887777 8999997 6999999999999999999999988764
No 128
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=98.29 E-value=3.9e-06 Score=69.58 Aligned_cols=88 Identities=10% Similarity=0.097 Sum_probs=67.8
Q ss_pred HcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc--cEEEEEeccCC-------------------hhH--------
Q 021440 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDT-------------------SEG-------- 184 (312)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~--nFIfwq~~~ds-------------------~EG-------- 184 (312)
-.+|++||++.++||..|+.+. +.+.++.++ ++.|+.++.+. .+.
T Consensus 35 ~~gk~~lv~F~~~~C~~C~~~~------~~l~~l~~~~~~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (165)
T 3ha9_A 35 VGGDVVILWFMAAWCPSCVYMA------DLLDRLTEKYREISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANY 108 (165)
T ss_dssp CCSSEEEEEEECTTCTTHHHHH------HHHHHHHHHCTTEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHH
T ss_pred hCCCEEEEEEECCCCcchhhhH------HHHHHHHHHcCCcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHc
Confidence 3679999999999999999985 455666554 67777777762 211
Q ss_pred -----------HHHHHhcCCCCCCeEEEEeCCCCeeEEEecCCC-ChHHHHHHHHHHH
Q 021440 185 -----------WKVCSFYNMDSIPAVLVIDPITGQKICSWCGMI-NPQPLGEMLLPFM 230 (312)
Q Consensus 185 -----------~~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~-~~~~fl~~L~~fl 230 (312)
..++..|++..+|++.|||+ .|+.+. .|.. +.+++.+.|.+.+
T Consensus 109 ~~~~~~~~~d~~~~~~~~~v~~~P~~~lid~-~G~i~~--~g~~~~~~~l~~~l~~l~ 163 (165)
T 3ha9_A 109 GDPSWIMVMDDGSLVEKFNVRSIDYIVIMDK-SSNVLY--AGTTPSLGELESVIKSVQ 163 (165)
T ss_dssp SCTTSEEEECCSHHHHHTTCCSSSEEEEEET-TCCEEE--EEESCCHHHHHHHHHHC-
T ss_pred CCCCeeEEeChHHHHHHhCCCCceEEEEEcC-CCcEEE--eCCCCCHHHHHHHHHHHh
Confidence 26778899999999999997 688776 7888 8888888777654
No 129
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=98.28 E-value=2.9e-06 Score=68.37 Aligned_cols=90 Identities=10% Similarity=0.128 Sum_probs=65.8
Q ss_pred cCCeEEEEeecCCCcccchhhcccCCCHHHHHHhh-ccEEEEEeccCChh-H-HHH--------------------HHhc
Q 021440 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS-VNFIFWQEYDDTSE-G-WKV--------------------CSFY 191 (312)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~-~nFIfwq~~~ds~E-G-~~~--------------------~~~Y 191 (312)
.+|++||++.++||.+|+.+-..+-..+.+.+.++ .++.++.++.+... . .++ +..|
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 105 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQLY 105 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHHc
Confidence 68999999999999999998666655566666665 45888888777432 1 222 3378
Q ss_pred CCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHH
Q 021440 192 NMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLP 228 (312)
Q Consensus 192 ~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~ 228 (312)
.+..+|++.|||+ .|+.+. +.++.+++.+.|.+
T Consensus 106 ~v~~~P~~~lid~-~G~i~~---~~~~~~~l~~~l~~ 138 (142)
T 3ewl_A 106 DIRATPTIYLLDG-RKRVIL---KDTSMEQLIDYLAT 138 (142)
T ss_dssp CCCSSSEEEEECT-TCBEEE---CSCCHHHHHHHHHC
T ss_pred CCCCCCeEEEECC-CCCEEe---cCCCHHHHHHHHHH
Confidence 8999999999997 688764 45677766555544
No 130
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=98.26 E-value=3.2e-06 Score=68.48 Aligned_cols=80 Identities=10% Similarity=0.157 Sum_probs=61.0
Q ss_pred cCCeEEEEeecCCCcccchhhcccCCCHHHHHHhh-ccEEEEEeccCChhHH----------------------HHHHhc
Q 021440 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS-VNFIFWQEYDDTSEGW----------------------KVCSFY 191 (312)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~-~nFIfwq~~~ds~EG~----------------------~~~~~Y 191 (312)
.+|++||++.++||.+|+..-..+-.++.+.+-++ .++.++.++.+..... .+...|
T Consensus 30 ~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 109 (142)
T 3eur_A 30 PAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLY 109 (142)
T ss_dssp CCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhc
Confidence 47999999999999999988766655555655553 5688888887764221 257788
Q ss_pred CCCCCCeEEEEeCCCCeeEEEecC
Q 021440 192 NMDSIPAVLVIDPITGQKICSWCG 215 (312)
Q Consensus 192 ~~~~~P~i~IIdprTGe~v~~~~G 215 (312)
.+..+|++.|||+ .|+.+....|
T Consensus 110 ~v~~~P~~~lid~-~G~i~~~~~~ 132 (142)
T 3eur_A 110 DLRAIPTLYLLDK-NKTVLLKDAT 132 (142)
T ss_dssp CCTTCSEEEEECT-TCBEEEEEEC
T ss_pred CCCcCCeEEEECC-CCcEEecCCC
Confidence 9999999999996 6998876544
No 131
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=98.25 E-value=3e-06 Score=70.66 Aligned_cols=100 Identities=12% Similarity=0.065 Sum_probs=62.5
Q ss_pred cccccHHHHHHHHHHcCCeEEEEeecCC--CcccchhhcccCCCHHHHHHhhc--cEE--EEEeccCChhHHHHHHhcCC
Q 021440 120 MFNGSFEKAKDAALAQDKWLLVNLQSTK--EFSSLMLNRDTWGNEAVSQIISV--NFI--FWQEYDDTSEGWKVCSFYNM 193 (312)
Q Consensus 120 ~~~gsf~~A~~~Ak~~~KwLLVniq~~~--~f~c~~lnRDvw~~~~V~~~i~~--nFI--fwq~~~ds~EG~~~~~~Y~~ 193 (312)
+-..+|++.+. ..+.++|++...| |.+|+.|. +.+.++.++ ++. |+.++.| +...++..|++
T Consensus 22 l~~~~f~~~i~----~~~~~vv~f~~~~~~C~~C~~l~------P~l~~la~~~~~v~~~~~~Vd~d--~~~~la~~~~V 89 (142)
T 2es7_A 22 VEASTVDDWIK----RVGDGVILLSSDPRRTPEVSDNP------VMIAELLREFPQFDWQVAVADLE--QSEAIGDRFNV 89 (142)
T ss_dssp CCCC------------CCSEEEEECCCSCC----CCHH------HHHHHHHHTCTTSCCEEEEECHH--HHHHHHHTTTC
T ss_pred cccccHHHHHH----hCCCEEEEEECCCCCCccHHHHH------HHHHHHHHHhcccceeEEEEECC--CCHHHHHhcCC
Confidence 44567888764 3344778888766 89999985 444454443 566 7777654 56679999999
Q ss_pred CCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhC
Q 021440 194 DSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRS 233 (312)
Q Consensus 194 ~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~~ 233 (312)
..+|+++++ +.|+.+..+.|..+.+++.+.|.+.+...
T Consensus 90 ~~iPT~~~f--k~G~~v~~~~G~~~~~~l~~~i~~~l~~~ 127 (142)
T 2es7_A 90 RRFPATLVF--TDGKLRGALSGIHPWAELLTLMRSIVDTP 127 (142)
T ss_dssp CSSSEEEEE--SCC----CEESCCCHHHHHHHHHHHHC--
T ss_pred CcCCeEEEE--eCCEEEEEEeCCCCHHHHHHHHHHHhccc
Confidence 999999999 47999988999999999888888887543
No 132
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=98.24 E-value=3e-06 Score=62.20 Aligned_cols=81 Identities=12% Similarity=0.016 Sum_probs=62.3
Q ss_pred EEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCC
Q 021440 139 LLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMIN 218 (312)
Q Consensus 139 LLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~ 218 (312)
.+|+++++||..|+.+...+ +.+.+-...++.|..++.+. ...++..|++..+|++.| .|+. .+.|..+
T Consensus 4 ~vv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~----~G~~--~~~G~~~ 72 (85)
T 1nho_A 4 NIEVFTSPTCPYCPMAIEVV---DEAKKEFGDKIDVEKIDIMV--DREKAIEYGLMAVPAIAI----NGVV--RFVGAPS 72 (85)
T ss_dssp CEEEESCSSSCCSTTHHHHH---HHHHHHHCSSCCEEEECTTT--CGGGGGGTCSSCSSEEEE----TTTE--EEECSSC
T ss_pred EEEEEECCCCcchHHHHHHH---HHHHHHhcCCeEEEEEECCC--CHHHHHhCCceeeCEEEE----CCEE--EEccCCC
Confidence 47899999999999997643 34444444578888887664 346888999999999998 4665 6788888
Q ss_pred hHHHHHHHHHHH
Q 021440 219 PQPLGEMLLPFM 230 (312)
Q Consensus 219 ~~~fl~~L~~fl 230 (312)
.+++.+.|.+.+
T Consensus 73 ~~~l~~~l~~~l 84 (85)
T 1nho_A 73 REELFEAINDEM 84 (85)
T ss_dssp CHHHHHHHHHHC
T ss_pred HHHHHHHHHHHh
Confidence 999888887765
No 133
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=98.21 E-value=4.6e-06 Score=67.59 Aligned_cols=77 Identities=14% Similarity=0.065 Sum_probs=59.2
Q ss_pred HHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhh--ccEEEEEeccCChh----------------------HHHHH
Q 021440 133 LAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS--VNFIFWQEYDDTSE----------------------GWKVC 188 (312)
Q Consensus 133 k~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~--~nFIfwq~~~ds~E----------------------G~~~~ 188 (312)
.-++|++||++..+||..|+.+...+ ..+.+-++ .++.++.++.+... ...++
T Consensus 25 ~~~gk~vll~F~a~wC~~C~~~~~~l---~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 101 (144)
T 1i5g_A 25 SLAGKTVFFYFSASWCPPSRAFTPQL---IDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLT 101 (144)
T ss_dssp GGTTSEEEEEEECTTCHHHHHHHHHH---HHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHH
T ss_pred HcCCCEEEEEEECCCCHHHHHHHHHH---HHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHH
Confidence 34689999999999999999886554 33444444 47888888777532 46788
Q ss_pred HhcCCCCCCeEEEEeCCCCeeEEE
Q 021440 189 SFYNMDSIPAVLVIDPITGQKICS 212 (312)
Q Consensus 189 ~~Y~~~~~P~i~IIdprTGe~v~~ 212 (312)
+.|++..+|++.|||++.|+.+..
T Consensus 102 ~~~~v~~~P~~~lid~~~G~i~~~ 125 (144)
T 1i5g_A 102 TGFDVKSIPTLVGVEADSGNIITT 125 (144)
T ss_dssp HHTTCCSSSEEEEEETTTCCEEES
T ss_pred HHcCCCCCCEEEEEECCCCcEEec
Confidence 999999999999999546887765
No 134
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=98.20 E-value=3.6e-06 Score=68.50 Aligned_cols=79 Identities=15% Similarity=0.127 Sum_probs=59.7
Q ss_pred HHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhh--ccEEEEEeccCChh----------------------HHHH
Q 021440 132 ALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS--VNFIFWQEYDDTSE----------------------GWKV 187 (312)
Q Consensus 132 Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~--~nFIfwq~~~ds~E----------------------G~~~ 187 (312)
+.-++|++||++..+||..|+.+...+ ..+.+-++ .++.++.++.+... ...+
T Consensus 24 ~~~~gk~vll~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 100 (146)
T 1o8x_A 24 KSLAGKLVFFYFSASWCPPARGFTPQL---IEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKL 100 (146)
T ss_dssp GGGTTCEEEEEEECTTCHHHHHHHHHH---HHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHH
T ss_pred HHhCCCEEEEEEEccCCHHHHHHHHHH---HHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHH
Confidence 344689999999999999999886544 23444444 47777777777532 4678
Q ss_pred HHhcCCCCCCeEEEEeCCCCeeEEEe
Q 021440 188 CSFYNMDSIPAVLVIDPITGQKICSW 213 (312)
Q Consensus 188 ~~~Y~~~~~P~i~IIdprTGe~v~~~ 213 (312)
++.|++..+|++.|||++.|+.+..+
T Consensus 101 ~~~~~v~~~Pt~~lid~~~G~i~~~~ 126 (146)
T 1o8x_A 101 SKHFNVESIPTLIGVDADSGDVVTTR 126 (146)
T ss_dssp HHHTTCCSSSEEEEEETTTCCEEESC
T ss_pred HHHhCCCCCCEEEEEECCCCeEEEec
Confidence 89999999999999995478877653
No 135
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.18 E-value=5.6e-06 Score=70.54 Aligned_cols=100 Identities=8% Similarity=0.072 Sum_probs=72.3
Q ss_pred HcCCe-EEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCC--------h-------------------hHH
Q 021440 134 AQDKW-LLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDT--------S-------------------EGW 185 (312)
Q Consensus 134 ~~~Kw-LLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds--------~-------------------EG~ 185 (312)
-.+|+ +||++.++||..|+..-..+ ..-..+|-..++.|+.++.+. . +..
T Consensus 43 ~~gk~~vlv~F~a~~C~~C~~~~~~l--~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~ 120 (196)
T 2ywi_A 43 VKSDAATVIMFICNHCPFVKHVQHEL--VRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQ 120 (196)
T ss_dssp HCCSSEEEEEECCSSCHHHHHHHHHH--HHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSC
T ss_pred hCCCCeEEEEEeCCCCccHHHHHHHH--HHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCch
Confidence 35674 99999999999999775432 111222323458888887743 1 123
Q ss_pred HHHHhcCCCCCCeEEEEeCCCCeeEEE---------ecCCCChHHHHHHHHHHHhhCCCC
Q 021440 186 KVCSFYNMDSIPAVLVIDPITGQKICS---------WCGMINPQPLGEMLLPFMDRSPRK 236 (312)
Q Consensus 186 ~~~~~Y~~~~~P~i~IIdprTGe~v~~---------~~G~~~~~~fl~~L~~fl~~~~~~ 236 (312)
.++..|.+..+|++.|||+ .|+.+.. +.|..+++++.+.|.+.+...+..
T Consensus 121 ~~~~~~~v~~~P~~~lid~-~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~~~~~~ 179 (196)
T 2ywi_A 121 EVAKAYDAACTPDFYIFDR-DLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLEGRPVP 179 (196)
T ss_dssp HHHHHHTCCEESEEEEEET-TCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHHTCCCC
T ss_pred HHHHHhCCCCCCeEEEEcC-CCeEEEccccCcccccccCccCHHHHHHHHHHHHcCCCCC
Confidence 5677888999999999997 6998877 347778999999999998776543
No 136
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=98.18 E-value=2.7e-06 Score=68.10 Aligned_cols=94 Identities=10% Similarity=0.081 Sum_probs=65.6
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecC-------CCcccchhhcccCCCHHHHHHhh---ccEEEEEeccCC-----hhHHHH
Q 021440 123 GSFEKAKDAALAQDKWLLVNLQST-------KEFSSLMLNRDTWGNEAVSQIIS---VNFIFWQEYDDT-----SEGWKV 187 (312)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~-------~~f~c~~lnRDvw~~~~V~~~i~---~nFIfwq~~~ds-----~EG~~~ 187 (312)
.+|++++..+ .+|.++|+++++ ||.+|+.+.. .+.++.+ .++.|..++++. .+...+
T Consensus 13 ~~~~~~~~~~--~~~~v~v~F~a~~~~~~~~wC~~C~~~~p------~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~ 84 (123)
T 1wou_A 13 EEFHRAVEQH--NGKTIFAYFTGSKDAGGKSWCPDCVQAEP------VVREGLKHISEGCVFIYCQVGEKPYWKDPNNDF 84 (123)
T ss_dssp HHHHHHHHTT--TTSEEEEEEECCBCTTCCBSCHHHHHHHH------HHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHH
T ss_pred HHHHHHHHHh--CCCEEEEEEEccCCCCCCCcCHHHHHhhH------HHHHHHHHcCCCcEEEEEECCCchhhhchhHHH
Confidence 3455555433 489999999999 9999999964 4455554 469999998853 234468
Q ss_pred HHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021440 188 CSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (312)
Q Consensus 188 ~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~ 231 (312)
+..|++..+|++++++. |.++....| .+++. |.+||+
T Consensus 85 ~~~~~i~~~Pt~~~~~~--~~~~~g~~~-~~~~~----l~~~i~ 121 (123)
T 1wou_A 85 RKNLKVTAVPTLLKYGT--PQKLVESEC-LQANL----VEMLFS 121 (123)
T ss_dssp HHHHCCCSSSEEEETTS--SCEEEGGGG-GCHHH----HHHHHH
T ss_pred HHHCCCCeeCEEEEEcC--CceEecccc-CCHHH----HHHHHh
Confidence 88899999999999986 555543343 24444 445543
No 137
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=98.17 E-value=1e-06 Score=80.54 Aligned_cols=102 Identities=11% Similarity=0.131 Sum_probs=75.1
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc--cEEEEEeccCChhHHHHHHhcCCCCCCeE
Q 021440 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDSIPAV 199 (312)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~--nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i 199 (312)
..+|.+++..+ ..+|++||+|+.+||.+|+.|.. .+.++..+ ++.|+.++++. ..++..|++..+|++
T Consensus 120 ~~~f~~~v~~~-~~~k~VvV~Fya~wC~~Ck~l~p------~l~~La~~~~~v~f~kVd~d~---~~l~~~~~I~~~PTl 189 (245)
T 1a0r_P 120 GEQFLETIEKE-QKITTIVVHIYEDGIKGCDALNS------SLICLAAEYPMVKFCKIKASN---TGAGDRFSSDVLPTL 189 (245)
T ss_dssp HHHHHHHHHSS-CTTCEEEEEEECTTSTTHHHHHH------HHHHHHHHCTTSEEEEEEHHH---HCCTTSSCTTTCSEE
T ss_pred HHHHHHHHHHh-cCCCEEEEEEECCCChHHHHHHH------HHHHHHHHCCCCEEEEEeCCc---HHHHHHCCCCCCCEE
Confidence 34566655433 35899999999999999999964 44444443 37888887754 457889999999999
Q ss_pred EEEeCCCCeeEEEecCCCC---hHHHHHHHHHHHhhCCC
Q 021440 200 LVIDPITGQKICSWCGMIN---PQPLGEMLLPFMDRSPR 235 (312)
Q Consensus 200 ~IIdprTGe~v~~~~G~~~---~~~fl~~L~~fl~~~~~ 235 (312)
+|+. .|+.+..+.|+.+ .+-..+.|..||.++..
T Consensus 190 l~~~--~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~g~ 226 (245)
T 1a0r_P 190 LVYK--GGELLSNFISVTEQLAEEFFTGDVESFLNEYGL 226 (245)
T ss_dssp EEEE--TTEEEEEETTGGGGSCTTCCHHHHHHHHHTTTC
T ss_pred EEEE--CCEEEEEEeCCcccccccccHHHHHHHHHHcCC
Confidence 9886 5999988888643 12346778888887643
No 138
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=98.16 E-value=6.1e-06 Score=60.50 Aligned_cols=82 Identities=13% Similarity=0.050 Sum_probs=62.1
Q ss_pred CeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCCCCeeEEEecCC
Q 021440 137 KWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGM 216 (312)
Q Consensus 137 KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~ 216 (312)
+..+|++.++||..|+.+...+ ..+.+-...++.|..++.+.. ..++..|++..+|++.| .|+. .+.|.
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~~~vd~~~~--~~~~~~~~v~~~Pt~~~----~G~~--~~~G~ 71 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVV---EEVANEMPDAVEVEYINVMEN--PQKAMEYGIMAVPTIVI----NGDV--EFIGA 71 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHH---HHHHHHCSSSEEEEEEESSSS--CCTTTSTTTCCSSEEEE----TTEE--ECCSS
T ss_pred ceEEEEEeCCCCCchHHHHHHH---HHHHHHcCCceEEEEEECCCC--HHHHHHCCCcccCEEEE----CCEE--eeecC
Confidence 4578999999999999996533 233333344788888877643 36788899999999998 4775 78898
Q ss_pred CChHHHHHHHHHH
Q 021440 217 INPQPLGEMLLPF 229 (312)
Q Consensus 217 ~~~~~fl~~L~~f 229 (312)
.+++++.+.|.+.
T Consensus 72 ~~~~~l~~~l~~~ 84 (85)
T 1fo5_A 72 PTKEALVEAIKKR 84 (85)
T ss_dssp SSSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHh
Confidence 8898888877764
No 139
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=98.16 E-value=6.6e-06 Score=66.34 Aligned_cols=79 Identities=15% Similarity=0.065 Sum_probs=59.3
Q ss_pred HHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhh--ccEEEEEeccCChh----------------------HHHH
Q 021440 132 ALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS--VNFIFWQEYDDTSE----------------------GWKV 187 (312)
Q Consensus 132 Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~--~nFIfwq~~~ds~E----------------------G~~~ 187 (312)
+.-++|++||++..+||..|+.+...+ ..+.+-++ .++.++.++.|... ...+
T Consensus 24 ~~~~gk~vll~F~a~wC~~C~~~~~~l---~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (144)
T 1o73_A 24 GSLVGKTVFLYFSASWCPPCRGFTPVL---AEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSEL 100 (144)
T ss_dssp GGGTTCEEEEEEECTTCHHHHHHHHHH---HHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHH
T ss_pred HHhCCCEEEEEEECcCCHHHHHHHHHH---HHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHH
Confidence 445789999999999999999886543 22333333 46777777777632 4578
Q ss_pred HHhcCCCCCCeEEEEeCCCCeeEEEe
Q 021440 188 CSFYNMDSIPAVLVIDPITGQKICSW 213 (312)
Q Consensus 188 ~~~Y~~~~~P~i~IIdprTGe~v~~~ 213 (312)
++.|++..+|++.|||+..|+.+..+
T Consensus 101 ~~~~~v~~~Pt~~lid~~~G~i~~~~ 126 (144)
T 1o73_A 101 GKTFGVESIPTLITINADTGAIIGTQ 126 (144)
T ss_dssp HHHHTCCSSSEEEEEETTTCCEEESC
T ss_pred HHHcCCCCCCEEEEEECCCCeEEecc
Confidence 89999999999999995578877653
No 140
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.14 E-value=8.6e-06 Score=67.81 Aligned_cols=95 Identities=13% Similarity=0.111 Sum_probs=67.7
Q ss_pred cCCe-EEEEee-cCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChh-------------------HHHHHHhcCC
Q 021440 135 QDKW-LLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSE-------------------GWKVCSFYNM 193 (312)
Q Consensus 135 ~~Kw-LLVniq-~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~E-------------------G~~~~~~Y~~ 193 (312)
.+|+ ++|++. ++||..|...-..+ .+...+|-..++.++.++.|+++ ...++..|.+
T Consensus 27 ~gk~~vvl~F~~a~~C~~C~~~~~~l--~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 104 (161)
T 3drn_A 27 IGKHNIVLYFYPKDDTPGSTREASAF--RDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGA 104 (161)
T ss_dssp TTTSEEEEEECSCTTCHHHHHHHHHH--HHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTC
T ss_pred cCCCCEEEEEEcCCCCCchHHHHHHH--HHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCC
Confidence 4677 999999 99999999876543 12223333346888888888653 3457778888
Q ss_pred CC----CCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021440 194 DS----IPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (312)
Q Consensus 194 ~~----~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~ 232 (312)
.. +|++.|||+ .|+.+..+.|...+...++.+.+.|+.
T Consensus 105 ~~~~~~~P~~~lid~-~G~i~~~~~g~~~~~~~~~~il~~l~~ 146 (161)
T 3drn_A 105 KGFILPARITFVIDK-KGIIRHIYNSQMNPANHVNEALKALKQ 146 (161)
T ss_dssp CCSSSCCCEEEEECT-TSBEEEEEECSSCTTHHHHHHHHHHHH
T ss_pred CCcCcccceEEEECC-CCEEEEEEecCCCCCcCHHHHHHHHHH
Confidence 77 999999997 699999999865555555555555443
No 141
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=98.12 E-value=1.2e-05 Score=76.74 Aligned_cols=100 Identities=16% Similarity=0.178 Sum_probs=78.4
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHh------hccEEEEEeccCChhHHHHHHhcCCCC
Q 021440 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQII------SVNFIFWQEYDDTSEGWKVCSFYNMDS 195 (312)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i------~~nFIfwq~~~ds~EG~~~~~~Y~~~~ 195 (312)
..+|++++ ..+|++||+++++||..|+.|...+ +.+.+.+ +.++.|..++.+.. ..++..|++..
T Consensus 12 ~~~f~~~~----~~~~~vlV~F~a~wC~~C~~~~p~~---~~~a~~~~~~~~~~~~v~~~~Vd~~~~--~~l~~~~~v~~ 82 (382)
T 2r2j_A 12 TENIDEIL----NNADVALVNFYADWCRFSQMLHPIF---EEASDVIKEEFPNENQVVFARVDCDQH--SDIAQRYRISK 82 (382)
T ss_dssp TTTHHHHH----HHCSEEEEEEECTTCHHHHHHHHHH---HHHHHHHTTCC---CCEEEEEEETTTC--HHHHHHTTCCE
T ss_pred HHHHHHHH----hcCCeEEEEEECCCCHHHHHHHHHH---HHHHHHHHhhcCCCCceEEEEEECCcc--HHHHHhcCCCc
Confidence 45677765 3579999999999999999997543 3444445 33588998877643 67999999999
Q ss_pred CCeEEEEeCCCCeeEE-EecCCCChHHHHHHHHHHHhh
Q 021440 196 IPAVLVIDPITGQKIC-SWCGMINPQPLGEMLLPFMDR 232 (312)
Q Consensus 196 ~P~i~IIdprTGe~v~-~~~G~~~~~~fl~~L~~fl~~ 232 (312)
||++.++. .|+.+. .+.|..+.+.+++.|.+.+..
T Consensus 83 ~Pt~~~f~--~G~~~~~~~~G~~~~~~l~~~i~~~~~~ 118 (382)
T 2r2j_A 83 YPTLKLFR--NGMMMKREYRGQRSVKALADYIRQQKSD 118 (382)
T ss_dssp ESEEEEEE--TTEEEEEECCSCCSHHHHHHHHHHHHSC
T ss_pred CCEEEEEe--CCcEeeeeecCcchHHHHHHHHHHhccC
Confidence 99999886 588776 489999999998888888754
No 142
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=98.12 E-value=1e-05 Score=79.65 Aligned_cols=99 Identities=9% Similarity=0.089 Sum_probs=79.9
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc-cEEEEEeccCChhHHHHHHhcCCCCCCeE
Q 021440 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV-NFIFWQEYDDTSEGWKVCSFYNMDSIPAV 199 (312)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~-nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i 199 (312)
-..+|++++ ++++++||+++++||..|+.|.... ..+.+-++. ++.|..++.+.. ..+++.|++..||++
T Consensus 20 ~~~~f~~~~----~~~~~~lv~F~a~wC~~C~~~~p~~---~~~a~~~~~~~v~~~~vd~~~~--~~l~~~~~v~~~Pt~ 90 (504)
T 2b5e_A 20 ATDSFNEYI----QSHDLVLAEFFAPWCGHCKNMAPEY---VKAAETLVEKNITLAQIDCTEN--QDLCMEHNIPGFPSL 90 (504)
T ss_dssp CTTTHHHHH----TTCSEEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTTCEEEEEETTTC--HHHHHHTTCCSSSEE
T ss_pred CHHHHHHHH----hcCCeEEEEEECCCCHHHHHhHHHH---HHHHHHhccCCeEEEEEECCCC--HHHHHhcCCCcCCEE
Confidence 356788865 4689999999999999999997643 455556665 599999877654 679999999999999
Q ss_pred EEEeCCCCee--EEEecCCCChHHHHHHHHHHH
Q 021440 200 LVIDPITGQK--ICSWCGMINPQPLGEMLLPFM 230 (312)
Q Consensus 200 ~IIdprTGe~--v~~~~G~~~~~~fl~~L~~fl 230 (312)
.++.. |+. +..+.|..+.+.+++.|.+.+
T Consensus 91 ~~~~~--g~~~~~~~~~G~~~~~~l~~~l~~~~ 121 (504)
T 2b5e_A 91 KIFKN--SDVNNSIDYEGPRTAEAIVQFMIKQS 121 (504)
T ss_dssp EEEET--TCTTCEEECCSCCSHHHHHHHHHHHT
T ss_pred EEEeC--CccccceeecCCCCHHHHHHHHHHhc
Confidence 99974 776 778999999999888877665
No 143
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=98.12 E-value=8.5e-06 Score=68.55 Aligned_cols=78 Identities=14% Similarity=0.109 Sum_probs=59.4
Q ss_pred HHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc--cEEEEEeccCChhH----------------------HHH
Q 021440 132 ALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEG----------------------WKV 187 (312)
Q Consensus 132 Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~--nFIfwq~~~ds~EG----------------------~~~ 187 (312)
+.-++|++||++..+||.+|+.+...+ ..+.+-+++ ++.++.++.|.... ..+
T Consensus 44 ~~~~gk~vll~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 120 (165)
T 3s9f_A 44 DSLSGKTVFFYFSASWCPPCRGFTPQL---VEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEAL 120 (165)
T ss_dssp GGGTTSEEEEEEECTTCHHHHHHHHHH---HHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHH
T ss_pred HHcCCCEEEEEEECCcChhHHHHHHHH---HHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHH
Confidence 334689999999999999999986544 334444443 67777777776532 678
Q ss_pred HHhcCCCCCCeEEEEeCCCCeeEEE
Q 021440 188 CSFYNMDSIPAVLVIDPITGQKICS 212 (312)
Q Consensus 188 ~~~Y~~~~~P~i~IIdprTGe~v~~ 212 (312)
++.|.+..+|++.|||+.+|+.+..
T Consensus 121 ~~~~~v~~~Pt~~lid~~~G~iv~~ 145 (165)
T 3s9f_A 121 TKKYSVESIPTLIGLNADTGDTVTT 145 (165)
T ss_dssp HHHTTCCSSSEEEEEETTTCCEEES
T ss_pred HHHcCCCCCCEEEEEeCCCCEEEec
Confidence 8999999999999999855887765
No 144
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.12 E-value=1.3e-05 Score=66.31 Aligned_cols=94 Identities=14% Similarity=0.129 Sum_probs=65.7
Q ss_pred cCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccC--------Chh-HHHHHH-hc-------------
Q 021440 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDD--------TSE-GWKVCS-FY------------- 191 (312)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~d--------s~E-G~~~~~-~Y------------- 191 (312)
++||+||++..+||..|+..-..+ ++-..+|-..++.++.++.| +.+ -.+++. .|
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l--~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 108 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEM--NQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVN 108 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHH--HHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSS
T ss_pred CCCEEEEEEEeccCCccHHHHHHH--HHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeeccC
Confidence 589999999999999998764433 11122222335777777764 222 233444 32
Q ss_pred ----------------CC--CCCC---eEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021440 192 ----------------NM--DSIP---AVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (312)
Q Consensus 192 ----------------~~--~~~P---~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~ 231 (312)
.+ ..+| ++.|||+ .|+.+..+.|..+++++.+.|.+.|.
T Consensus 109 ~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~-~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (170)
T 2p5q_A 109 GENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNK-DGQVVDRYYPTTSPLSLERDIKQLLE 168 (170)
T ss_dssp STTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECT-TSCEEEEECTTSCGGGGHHHHHHHTT
T ss_pred CCchHHHHHHHHhcCCCccCCcccccccEEEECC-CCCEEEeeCCCCCHHHHHHHHHHHhh
Confidence 23 5678 8999997 69999999999999999888888765
No 145
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.11 E-value=7.2e-06 Score=78.55 Aligned_cols=95 Identities=12% Similarity=0.068 Sum_probs=73.5
Q ss_pred cCCeEEEEeecCCCcccchhhcccCCCHHHHHHhh-ccEEEEEeccCC------h-------------------hHHHHH
Q 021440 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS-VNFIFWQEYDDT------S-------------------EGWKVC 188 (312)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~-~nFIfwq~~~ds------~-------------------EG~~~~ 188 (312)
++|++||++..+||.+|+.+...+ ..+.+-++ .++.++.++.+. + ....++
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L---~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~ 157 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHV---VGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATW 157 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHH---HHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHH
T ss_pred CCCEEEEEEECCCChhHHHHHHHH---HHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHH
Confidence 589999999999999999885543 22333233 368888887542 1 123577
Q ss_pred HhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhC
Q 021440 189 SFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRS 233 (312)
Q Consensus 189 ~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~~ 233 (312)
+.|.+..+|++.|||+ .|+.+..+.|..+++++.+.|.+.|.+.
T Consensus 158 ~~ygV~~~Pt~~lID~-~G~Iv~~~~G~~~~~~l~~~I~~lL~e~ 201 (352)
T 2hyx_A 158 TNYRNRYWPAEYLIDA-TGTVRHIKFGEGDYNVTETLVRQLLNDA 201 (352)
T ss_dssp HHTTCCEESEEEEECT-TSBEEEEEESBCCHHHHHHHHHHHHHHH
T ss_pred HHcCCCccCEEEEEeC-CCeEEEEEcCCCCHHHHHHHHHHHHhhc
Confidence 7899999999999997 6999999999999999999999988653
No 146
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.11 E-value=2e-05 Score=69.01 Aligned_cols=98 Identities=9% Similarity=0.111 Sum_probs=73.7
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhcc---EEEEEeccCChhHHHHHHhcCCCCCC
Q 021440 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVN---FIFWQEYDDTSEGWKVCSFYNMDSIP 197 (312)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~n---FIfwq~~~ds~EG~~~~~~Y~~~~~P 197 (312)
-..+|++++ ..+|.++|+++++||..|+.+...+ ..+.+-++.. +.|..++.+. ...++..|++..+|
T Consensus 136 ~~~~~~~~~----~~~~~~~v~f~a~wC~~C~~~~p~~---~~~a~~~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~P 206 (241)
T 3idv_A 136 TKENFDEVV----NDADIILVEFYAPWCGHCKKLAPEY---EKAAKELSKRSPPIPLAKVDATA--ETDLAKRFDVSGYP 206 (241)
T ss_dssp CTTTHHHHH----HHCSEEEEEEECTTCTGGGGTHHHH---HHHHHHHHTSSSCCCEEEEETTT--CHHHHHHTTCCSSS
T ss_pred cHHHHHHhh----ccCCeEEEEEECCCCHHHHHhHHHH---HHHHHHHhccCCcEEEEEEECCC--CHHHHHHcCCcccC
Confidence 356677666 4568999999999999999996432 2333333332 7888887664 45689999999999
Q ss_pred eEEEEeCCCCeeEEEecCCCChHHHHHHHHHHH
Q 021440 198 AVLVIDPITGQKICSWCGMINPQPLGEMLLPFM 230 (312)
Q Consensus 198 ~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl 230 (312)
+++++.. |+.+. +.|..+.+++++.|.+.+
T Consensus 207 t~~~~~~--g~~~~-~~g~~~~~~l~~~l~~~~ 236 (241)
T 3idv_A 207 TLKIFRK--GRPYD-YNGPREKYGIVDYMIEQS 236 (241)
T ss_dssp EEEEEET--TEEEE-CCSCCSHHHHHHHHHHHT
T ss_pred EEEEEEC--CeEEE-ecCCCCHHHHHHHHHhhh
Confidence 9999984 77665 899889988888777654
No 147
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.09 E-value=3.7e-06 Score=82.10 Aligned_cols=102 Identities=13% Similarity=0.124 Sum_probs=80.3
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEE
Q 021440 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLV 201 (312)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~I 201 (312)
..+|++++ .....++.+||+++++||..|+.|...+ +.+.+-++..+.|..++.+. ...+++.|++..||++.+
T Consensus 8 ~~~f~~~i-~~~~~~~~~lv~F~a~wC~~C~~~~p~~---~~~a~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Ptl~~ 81 (481)
T 3f8u_A 8 DDNFESRI-SDTGSAGLMLVEFFAPWCGHAKRLAPEY---EAAATRLKGIVPLAKVDCTA--NTNTCNKYGVSGYPTLKI 81 (481)
T ss_dssp TTTHHHHT-TCCSSSSEEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTCCEEEEETTT--CHHHHHHTTCCEESEEEE
T ss_pred HHHHHHHH-HhCCCCCeEEEEEECCCCHHHHHhHHHH---HHHHHHhcCceEEEEEECCC--CHHHHHhcCCCCCCEEEE
Confidence 45677766 2223349999999999999999997643 55666666667788876654 567999999999999999
Q ss_pred EeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021440 202 IDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (312)
Q Consensus 202 IdprTGe~v~~~~G~~~~~~fl~~L~~fl~ 231 (312)
+. .|+.+..+.|..+.+.+++.|.+.+.
T Consensus 82 ~~--~g~~~~~~~G~~~~~~l~~~~~~~~~ 109 (481)
T 3f8u_A 82 FR--DGEEAGAYDGPRTADGIVSHLKKQAG 109 (481)
T ss_dssp EE--TTEEEEECCSCSSHHHHHHHHHHHTS
T ss_pred Ee--CCceeeeecCccCHHHHHHHHHhhcc
Confidence 95 58888889999999988888877764
No 148
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=98.08 E-value=2.6e-06 Score=76.05 Aligned_cols=102 Identities=13% Similarity=0.162 Sum_probs=74.1
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc--cEEEEEeccCChhHHHHHHhcCCCCCCe
Q 021440 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDSIPA 198 (312)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~--nFIfwq~~~ds~EG~~~~~~Y~~~~~P~ 198 (312)
-..+|.+++..+ ..+|++||+|+.+||..|+.|.. .+.++..+ ++.|..++++ ...++..|++..+|+
T Consensus 106 ~~~~f~~~v~~~-~~~k~vvV~F~a~wC~~C~~l~p------~l~~la~~~~~v~f~~vd~~---~~~l~~~~~i~~~PT 175 (217)
T 2trc_P 106 TGEQFLETIEKE-QKVTTIVVNIYEDGVRGCDALNS------SLECLAAEYPMVKFCKIRAS---NTGAGDRFSSDVLPT 175 (217)
T ss_dssp SHHHHHHHHHHS-CTTCEEEEEEECTTSTTHHHHHH------HHHHHHTTCTTSEEEEEEHH---HHTCSTTSCGGGCSE
T ss_pred CHHHHHHHHHhc-CCCcEEEEEEECCCCccHHHHHH------HHHHHHHHCCCeEEEEEECC---cHHHHHHCCCCCCCE
Confidence 344566665432 24599999999999999999964 44555544 4788888776 455788999999999
Q ss_pred EEEEeCCCCeeEEEecCCCCh---HHHHHHHHHHHhhCC
Q 021440 199 VLVIDPITGQKICSWCGMINP---QPLGEMLLPFMDRSP 234 (312)
Q Consensus 199 i~IIdprTGe~v~~~~G~~~~---~~fl~~L~~fl~~~~ 234 (312)
|+|+. .|+.+..+.|+.+. +-.++.|..||.++.
T Consensus 176 l~~~~--~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~~g 212 (217)
T 2trc_P 176 LLVYK--GGELISNFISVAEQFAEDFFAADVESFLNEYG 212 (217)
T ss_dssp EEEEE--TTEEEEEETTGGGGSCSSCCHHHHHHHHHTTT
T ss_pred EEEEE--CCEEEEEEeCCcccCcccCCHHHHHHHHHHcC
Confidence 99996 69999888886542 222456777776653
No 149
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.06 E-value=1.2e-05 Score=68.19 Aligned_cols=95 Identities=11% Similarity=0.028 Sum_probs=67.9
Q ss_pred cCCeEEEEeecCCCcccchhhcccCCCHHHHHHhh---ccEEEEEeccCC--------h-------------------hH
Q 021440 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS---VNFIFWQEYDDT--------S-------------------EG 184 (312)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~---~nFIfwq~~~ds--------~-------------------EG 184 (312)
.+|++||++.++||..|+..-. .+.++.+ ..+.|+.++.+. . ..
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~------~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~ 105 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIG------ELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDET 105 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHH------HHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSS
T ss_pred CCCEEEEEEECCCCccHHHHHH------HHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCc
Confidence 5799999999999999987643 3333333 237777777642 1 12
Q ss_pred HHHHHhcCCCCCCeEEEEeCCCCeeEEEe--------cCCCChHHHHHHHHHHHhhCCCC
Q 021440 185 WKVCSFYNMDSIPAVLVIDPITGQKICSW--------CGMINPQPLGEMLLPFMDRSPRK 236 (312)
Q Consensus 185 ~~~~~~Y~~~~~P~i~IIdprTGe~v~~~--------~G~~~~~~fl~~L~~fl~~~~~~ 236 (312)
..++..|.+..+|++.|||+ .|+.+... .|..+++++.+.|.+.+...+..
T Consensus 106 ~~~~~~~~v~~~P~~~lid~-~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~~~~~~ 164 (188)
T 2cvb_A 106 QEVAKAYRALRTPEVFLFDE-RRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLRGEEPP 164 (188)
T ss_dssp SHHHHHTTCCEESEEEEECT-TCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHTTCCCC
T ss_pred chHHHHcCCCCCCeEEEECC-CCcEEEEEecCCccccccccCHHHHHHHHHHHHcCCCCC
Confidence 35677888999999999996 69887661 12336888999999988765543
No 150
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.05 E-value=2.5e-05 Score=64.52 Aligned_cols=95 Identities=12% Similarity=0.100 Sum_probs=63.7
Q ss_pred cCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCC--------h-hHHHH-HHhc-------------
Q 021440 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDT--------S-EGWKV-CSFY------------- 191 (312)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds--------~-EG~~~-~~~Y------------- 191 (312)
.+||+||++..+||..|...-..+ +.-..+|-..++.++.++.|. . +-.++ ...|
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l--~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 107 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQL--QEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQFDMFSKIKVN 107 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHH--HHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSEEBCCCCCS
T ss_pred CCCEEEEEEeeccCCchHHHHHHH--HHHHHHhhcCCeEEEEEECCccCCCCCCCHHHHHHHHHHhcCCCCceEEEEeec
Confidence 579999999999999997654332 111122222357777776542 1 22234 1222
Q ss_pred ----------------C-----CCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021440 192 ----------------N-----MDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (312)
Q Consensus 192 ----------------~-----~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~ 232 (312)
. +..+|++.|||+ .|+.+..+.|..+++++.+.|.+.|.+
T Consensus 108 ~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~i~~ll~~ 168 (169)
T 2v1m_A 108 GSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDR-QGQPVKRYSPTTAPYDIEGDIMELLEK 168 (169)
T ss_dssp STTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECT-TSCEEEEECTTSCGGGGHHHHHHHHHC
T ss_pred CccccHHHHHHHhhcCCccCCcccccceEEEECC-CCCEEEEcCCCCCHHHHHHHHHHHhcc
Confidence 2 334589999997 699999999999999999988888753
No 151
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.05 E-value=1.3e-05 Score=67.24 Aligned_cols=94 Identities=13% Similarity=0.149 Sum_probs=64.3
Q ss_pred cCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccC--------Ch-hHHHHH-----------------
Q 021440 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDD--------TS-EGWKVC----------------- 188 (312)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~d--------s~-EG~~~~----------------- 188 (312)
.+||+||++.++||.+|+ .-..+ .+-..+|-..++.++.++.+ +. +-.+++
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l--~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~ 107 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKEL--EALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVN 107 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHH--HHHHHHHGGGTEEEEEEEECSCC------------------CCCSCBBCCCBSS
T ss_pred CCCEEEEEEEecCCCcch-hHHHH--HHHHHHhccCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCC
Confidence 589999999999999999 43221 11122232345888888653 22 122233
Q ss_pred -------------HhcCCCCCC------eEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021440 189 -------------SFYNMDSIP------AVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (312)
Q Consensus 189 -------------~~Y~~~~~P------~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~ 232 (312)
..|.+..+| ++.|||+ .|+.+..+.|..+++++.+.|.+.|.+
T Consensus 108 ~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~-~G~i~~~~~g~~~~~~l~~~i~~ll~~ 169 (171)
T 3cmi_A 108 GGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDK-KGKVYERYSSLTKPSSLSETIEELLKE 169 (171)
T ss_dssp STTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECS-SSCEEEEECTTSCGGGGHHHHHHHHTC
T ss_pred CccchHHHHHHHhccCCcCCCCcccccceEEEECC-CCCEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 235677789 9999997 699999999999999999999888764
No 152
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.05 E-value=1.6e-05 Score=68.18 Aligned_cols=94 Identities=12% Similarity=0.048 Sum_probs=66.5
Q ss_pred cCCeEEEEeecCCCcccchhhcccCCCHHHHH-HhhccEEEEEeccC--------Chh-HHHHH-Hh-------------
Q 021440 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQ-IISVNFIFWQEYDD--------TSE-GWKVC-SF------------- 190 (312)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~-~i~~nFIfwq~~~d--------s~E-G~~~~-~~------------- 190 (312)
++||+||++..+||..|...-..+ ..+.+ |-+.++.++.++.| +++ -.+|+ ..
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l---~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~ 123 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETA---TTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINV 123 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHH---HHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBS
T ss_pred CCCEEEEEEecCCCCccHHHHHHH---HHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeeccc
Confidence 579999999999999997654332 12222 22235777777665 222 23344 22
Q ss_pred ----------------cCCCCCC------eEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021440 191 ----------------YNMDSIP------AVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (312)
Q Consensus 191 ----------------Y~~~~~P------~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~ 232 (312)
|.+..+| ++.|||+ .|+.+..+.|..+++++.+.|.+.|.+
T Consensus 124 ~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~-~G~i~~~~~g~~~~~~l~~~i~~ll~~ 186 (190)
T 2vup_A 124 NGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDR-DGVPVERFSPGASVKDIEKKLIPLLES 186 (190)
T ss_dssp SSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECT-TSCEEEEECTTCCHHHHHHHHHHHHHC
T ss_pred CcccccHHHHHHHhhcCCcCCCccccccceEEEECC-CCcEEEEECCCCCHHHHHHHHHHHHhh
Confidence 3555678 9999997 699999999999999999999998864
No 153
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.01 E-value=1e-05 Score=78.89 Aligned_cols=102 Identities=13% Similarity=0.099 Sum_probs=78.1
Q ss_pred ccccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc--cEEEEEeccCChhHHHHHHhcCCCCC
Q 021440 119 VMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDSI 196 (312)
Q Consensus 119 l~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~--nFIfwq~~~ds~EG~~~~~~Y~~~~~ 196 (312)
.+...+|+++. ...+|.+||+++++||.+|+.+...+ ..+.+.+.. +++|..++.+.. .++..|++..|
T Consensus 356 ~~~~~~~~~~~---~~~~k~vlv~f~a~wC~~C~~~~p~~---~~l~~~~~~~~~v~~~~id~~~~---~~~~~~~v~~~ 426 (481)
T 3f8u_A 356 VVVAENFDEIV---NNENKDVLIEFYAPWCGHCKNLEPKY---KELGEKLSKDPNIVIAKMDATAN---DVPSPYEVRGF 426 (481)
T ss_dssp EECTTTHHHHH---TCTTCEEEEEEECTTBHHHHHHHHHH---HHHHHHTTTCSSEEEEEEETTSS---CCCTTCCCCSS
T ss_pred EecccCHHHHh---hcCCCcEEEEEecCcChhHHHhhHHH---HHHHHHhccCCCEEEEEEECCch---hhHhhCCCccc
Confidence 34455677665 44689999999999999999997654 455555555 699999988765 47778999999
Q ss_pred CeEEEEeCCCCe-eEEEecCCCChHHHHHHHHHHH
Q 021440 197 PAVLVIDPITGQ-KICSWCGMINPQPLGEMLLPFM 230 (312)
Q Consensus 197 P~i~IIdprTGe-~v~~~~G~~~~~~fl~~L~~fl 230 (312)
|++.+++. .|+ .+..+.|..+.++|++.|.+.+
T Consensus 427 Pt~~~~~~-~~~~~~~~~~G~~~~~~l~~~l~~~~ 460 (481)
T 3f8u_A 427 PTIYFSPA-NKKLNPKKYEGGRELSDFISYLQREA 460 (481)
T ss_dssp SEEEEECT-TCTTSCEECCSCCSHHHHHHHHHHHC
T ss_pred CEEEEEeC-CCeEeeeEeCCCCCHHHHHHHHHHhc
Confidence 99999985 344 2677899999888777776654
No 154
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=97.99 E-value=2.3e-05 Score=73.65 Aligned_cols=95 Identities=14% Similarity=0.160 Sum_probs=71.3
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcc------cCCCHHHHHHhhc-cEEEEEeccCChhHHHHHHhcCCCC
Q 021440 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRD------TWGNEAVSQIISV-NFIFWQEYDDTSEGWKVCSFYNMDS 195 (312)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRD------vw~~~~V~~~i~~-nFIfwq~~~ds~EG~~~~~~Y~~~~ 195 (312)
.+|++++ ++++.+||+++++||. |+.+... +|. .+.+.+++ ++.|..++.+.. ..+++.|++..
T Consensus 19 ~~f~~~i----~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~--~~a~~~~~~~v~~~~Vd~~~~--~~l~~~~~v~~ 89 (350)
T 1sji_A 19 KNFKQVL----KKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLE--LVAQVLEHKDIGFVMVDAKKE--AKLAKKLGFDE 89 (350)
T ss_dssp HHHHHHH----TTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHH--HHHHHGGGSSEEEEEEETTTT--HHHHHHHTCCS
T ss_pred HHHHHHH----hhCCeEEEEEECCCCc-chhhCchhhhhhHHHH--HHHHHHhhcCcEEEEEeCCCC--HHHHHhcCCCc
Confidence 4466654 4589999999999999 9776443 132 56666665 599998877654 57999999999
Q ss_pred CCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHH
Q 021440 196 IPAVLVIDPITGQKICSWCGMINPQPLGEMLLPF 229 (312)
Q Consensus 196 ~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~f 229 (312)
||++.++. .|+ +..+.|..+.+.+++.|.+.
T Consensus 90 ~Pt~~~~~--~g~-~~~~~G~~~~~~l~~~i~~~ 120 (350)
T 1sji_A 90 EGSLYVLK--GDR-TIEFDGEFAADVLVEFLLDL 120 (350)
T ss_dssp TTEEEEEE--TTE-EEEECSCCCHHHHHHHHHTT
T ss_pred cceEEEEE--CCc-EEEecCCCCHHHHHHHHHHh
Confidence 99999994 577 56789998888766555443
No 155
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=97.99 E-value=2.2e-05 Score=56.68 Aligned_cols=73 Identities=11% Similarity=0.189 Sum_probs=56.5
Q ss_pred EEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCCCCeeEEEecCCC-
Q 021440 139 LLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMI- 217 (312)
Q Consensus 139 LLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~- 217 (312)
+.|+++.+||.+|+.+...+ +++.+-.+.++.+..++ ...++..|++..+|++.| .|+.+.. |..
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l---~~~~~~~~~~~~~~~v~-----~~~~~~~~~v~~~Pt~~~----~G~~~~~--G~~~ 67 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNA---REAVKELGIDAEFEKIK-----EMDQILEAGLTALPGLAV----DGELKIM--GRVA 67 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHH---HHHHHHTTCCEEEEEEC-----SHHHHHHHTCSSSSCEEE----TTEEEEC--SSCC
T ss_pred cEEEEEcCCChhHHHHHHHH---HHHHHHcCCceEEEEec-----CHHHHHHCCCCcCCEEEE----CCEEEEc--CCCC
Confidence 46889999999999997655 45555556678888886 456888999999999998 4876644 887
Q ss_pred ChHHHHHH
Q 021440 218 NPQPLGEM 225 (312)
Q Consensus 218 ~~~~fl~~ 225 (312)
+.+++.+.
T Consensus 68 ~~~~l~~~ 75 (77)
T 1ilo_A 68 SKEEIKKI 75 (77)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 77776654
No 156
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=97.98 E-value=1.3e-05 Score=65.91 Aligned_cols=90 Identities=8% Similarity=-0.092 Sum_probs=62.9
Q ss_pred cCC-eEEEEee-cCCCcccchhhcccCCCHHHHHHhh----ccEEEEEeccCChh---------------------HHHH
Q 021440 135 QDK-WLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIIS----VNFIFWQEYDDTSE---------------------GWKV 187 (312)
Q Consensus 135 ~~K-wLLVniq-~~~~f~c~~lnRDvw~~~~V~~~i~----~nFIfwq~~~ds~E---------------------G~~~ 187 (312)
.+| |+||++. .+||..|...- +.+.++.+ .++.++.++.|+++ ...+
T Consensus 34 ~gk~~vvl~F~~a~~C~~C~~~~------~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 107 (160)
T 1xvw_A 34 RGAKNVLLVFFPLAFTGICQGEL------DQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAV 107 (160)
T ss_dssp TTTCEEEEEECSCTTSSHHHHHH------HHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHH
T ss_pred cCCCCEEEEEECCCCCCchHHHH------HHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHH
Confidence 455 9999998 99999998764 33444433 35777777777643 4567
Q ss_pred HHhcCCC----CCC--eEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021440 188 CSFYNMD----SIP--AVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (312)
Q Consensus 188 ~~~Y~~~----~~P--~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~ 231 (312)
+..|.+. .+| ++.|||+ .|+.+..+.|..+.+..++.+.+.|+
T Consensus 108 ~~~~~v~~~~~~~p~~~~~lid~-~G~i~~~~~g~~~~~~~~~~l~~~l~ 156 (160)
T 1xvw_A 108 SQAYGVFNEQAGIANRGTFVVDR-SGIIRFAEMKQPGEVRDQRLWTDALA 156 (160)
T ss_dssp HHHTTCEETTTTEECSEEEEECT-TSBEEEEEECCTTCCCCHHHHHHHHH
T ss_pred HHHcCCccccCCCeeeeEEEECC-CCeEEEEEecCCCCCCCHHHHHHHHH
Confidence 7888886 889 9999997 69999988887644333344444433
No 157
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=97.98 E-value=6.9e-06 Score=64.96 Aligned_cols=86 Identities=9% Similarity=-0.005 Sum_probs=61.0
Q ss_pred HHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCCh--hHHHHHHhcCCCCCCeEEEEeC
Q 021440 127 KAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTS--EGWKVCSFYNMDSIPAVLVIDP 204 (312)
Q Consensus 127 ~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~--EG~~~~~~Y~~~~~P~i~IIdp 204 (312)
+++..|+..+|..+|+++.+||..|+.|.. .+.++. +.|-+..++.+.. +...++..|++..+|++.|
T Consensus 3 ~~~~la~~~~k~~vV~F~A~WC~~C~~~~p------~~~~~a-~~~~~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i--- 72 (106)
T 3kp8_A 3 LAVGLAAHLRQIGGTMYGAYWCPHCQDQKE------LFGAAF-DQVPYVECSPNGPGTPQAQECTEAGITSYPTWII--- 72 (106)
T ss_dssp HHHHHHHHHHHHTCEEEECTTCHHHHHHHH------HHGGGG-GGSCEEESCTTCTTSCCCHHHHHTTCCSSSEEEE---
T ss_pred HhhHHHHhcCCCEEEEEECCCCHHHHHHHH------HHHHHH-HhCCEEEEecccccchhHHHHHHcCCeEeCEEEE---
Confidence 456667777888899999999999999953 222222 3333445554444 5678999999999999777
Q ss_pred CCCeeEEEecCCCChHHHHHHH
Q 021440 205 ITGQKICSWCGMINPQPLGEML 226 (312)
Q Consensus 205 rTGe~v~~~~G~~~~~~fl~~L 226 (312)
.|+. +.|..+.+++.+.+
T Consensus 73 -~G~~---~~G~~~~~~l~~~~ 90 (106)
T 3kp8_A 73 -NGRT---YTGVRSLEALAVAS 90 (106)
T ss_dssp -TTEE---EESCCCHHHHHHHH
T ss_pred -CCEE---ecCCCCHHHHHHHh
Confidence 4763 78988887755443
No 158
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=97.97 E-value=2.7e-05 Score=67.03 Aligned_cols=94 Identities=10% Similarity=-0.012 Sum_probs=68.1
Q ss_pred cCCeEEEEee-cCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChh-----------------------HHHHHHh
Q 021440 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSE-----------------------GWKVCSF 190 (312)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~E-----------------------G~~~~~~ 190 (312)
.+||+||++. .+||..|...-..+= ....+|-..++.++.++.|+.+ ...++..
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l~--~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 121 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAFS--KLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQA 121 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHHH--HTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHH
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHHH--HHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHH
Confidence 4799999999 999999987644321 1112222236777777777532 2346677
Q ss_pred cCCC-----CCCeEEEEeCCCCeeEEEecCCC----ChHHHHHHHHHHHh
Q 021440 191 YNMD-----SIPAVLVIDPITGQKICSWCGMI----NPQPLGEMLLPFMD 231 (312)
Q Consensus 191 Y~~~-----~~P~i~IIdprTGe~v~~~~G~~----~~~~fl~~L~~fl~ 231 (312)
|.+. .+|++.|||+ .|+.+..+.|.. +++++++.|...+.
T Consensus 122 ~~v~~~~g~~~P~~~lid~-~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 122 AGVLNADGVADRVTFIVDP-NNEIQFVSATAGSVGRNVDEVLRVLDALQS 170 (195)
T ss_dssp HTCBCTTSSBCEEEEEECT-TSBEEEEEEECTTCCCCHHHHHHHHHHHHC
T ss_pred hCCcccCCCccceEEEEcC-CCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 8887 8999999997 699998888764 67888888888765
No 159
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=97.96 E-value=8.9e-06 Score=65.89 Aligned_cols=82 Identities=17% Similarity=0.204 Sum_probs=59.5
Q ss_pred cCCeEEEEeecCCCcccchhhcccCCCHHHHHHhh----ccEEEEEeccCChh------------------------HHH
Q 021440 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS----VNFIFWQEYDDTSE------------------------GWK 186 (312)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~----~nFIfwq~~~ds~E------------------------G~~ 186 (312)
++|++||++..+||.+|...- +.+.++.+ .++.++.++.|... ...
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~------~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 104 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARN------VQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESE 104 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHH------HHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSH
T ss_pred CCCEEEEEEEcCcCHHHHHHH------HHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchH
Confidence 679999999999999998874 45555554 35777777776422 135
Q ss_pred HHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHH
Q 021440 187 VCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEML 226 (312)
Q Consensus 187 ~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L 226 (312)
++..|.+..+|++.|||+ .|+.+.... .++++.+.|
T Consensus 105 ~~~~~~v~~~P~~~lid~-~G~i~~~~~---~~~~l~~~l 140 (143)
T 4fo5_A 105 LYKKYDLRKGFKNFLIND-EGVIIAANV---TPEKLTEIL 140 (143)
T ss_dssp HHHHTTGGGCCCEEEECT-TSBEEEESC---CHHHHHHHH
T ss_pred HHHHcCCCCCCcEEEECC-CCEEEEccC---CHHHHHHHH
Confidence 677899999999999997 699876643 455544433
No 160
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=97.96 E-value=2.1e-05 Score=67.75 Aligned_cols=93 Identities=10% Similarity=0.024 Sum_probs=67.9
Q ss_pred cCCeEEEEee-cCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChh--------------------------HHHH
Q 021440 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSE--------------------------GWKV 187 (312)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~E--------------------------G~~~ 187 (312)
.+|++||++. .+||..|...-..+= .-..+|-..++.++.++.|+++ ...+
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~--~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 109 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFD--KRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSI 109 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHH--HTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHH--HHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHH
Confidence 6799999999 999999987754331 1122233446888888777643 2356
Q ss_pred HHhcCCC-----CCCeEEEEeCCCCeeEEEecCCC----ChHHHHHHHHHHH
Q 021440 188 CSFYNMD-----SIPAVLVIDPITGQKICSWCGMI----NPQPLGEMLLPFM 230 (312)
Q Consensus 188 ~~~Y~~~-----~~P~i~IIdprTGe~v~~~~G~~----~~~~fl~~L~~fl 230 (312)
++.|.+. .+|++.|||+ .|+.+..+.|.. +++++++.|....
T Consensus 110 ~~~~~v~~~~g~~~P~~~lid~-~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 110 SRDYDVLFEEAIALRGAFLIDK-NMKVRHAVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp HHHTTCEETTTEECEEEEEEET-TTEEEEEEEESSSCCCHHHHHHHHHHHHH
T ss_pred HHHhCCcccCCcccceEEEECC-CCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 7788887 8999999997 699998888865 5677777777665
No 161
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=97.96 E-value=1.4e-05 Score=75.03 Aligned_cols=101 Identities=11% Similarity=0.151 Sum_probs=75.2
Q ss_pred cccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc--cEEEEEeccCChhHHHHHHhcCCCCCC
Q 021440 120 MFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDSIP 197 (312)
Q Consensus 120 ~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~--nFIfwq~~~ds~EG~~~~~~Y~~~~~P 197 (312)
+-..+|++.. ...+|.+||+++++||..|+.|...+ ..+.+.++. +++|..++.+... +..|++..||
T Consensus 254 l~~~~f~~~~---~~~~k~~lv~f~a~wC~~C~~~~p~~---~~la~~~~~~~~v~~~~vd~~~~~----~~~~~v~~~P 323 (361)
T 3uem_A 254 LVGKNFEDVA---FDEKKNVFVEFYAPWCGHCKQLAPIW---DKLGETYKDHENIVIAKMDSTANE----VEAVKVHSFP 323 (361)
T ss_dssp ECTTTHHHHH---TCTTCEEEEEEECTTCHHHHHHHHHH---HHHHHHTTTCSSEEEEEEETTTCB----CSSCCCCSSS
T ss_pred eecCchhhhc---ccCCCcEEEEEecCcCHhHHHHHHHH---HHHHHHhccCCcEEEEEEECCccc----hhhcCCcccC
Confidence 3345677655 45789999999999999999997543 344444544 4999999887766 5689999999
Q ss_pred eEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhCC
Q 021440 198 AVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRSP 234 (312)
Q Consensus 198 ~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~~~ 234 (312)
++.++..-.|+.+..+.|..+.++|+ +||+++.
T Consensus 324 t~~~~~~~~~~~~~~~~G~~~~~~l~----~~l~~~~ 356 (361)
T 3uem_A 324 TLKFFPASADRTVIDYNGERTLDGFK----KFLESGG 356 (361)
T ss_dssp EEEEECSSSSCCCEECCSCSSHHHHH----HHHTTTS
T ss_pred eEEEEECCCCcceeEecCCCCHHHHH----HHHHhcC
Confidence 99999754456777889988887755 5555543
No 162
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=97.95 E-value=2.5e-05 Score=66.87 Aligned_cols=96 Identities=14% Similarity=0.087 Sum_probs=63.9
Q ss_pred cCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCC---------hhHHHHHH-h--------------
Q 021440 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDT---------SEGWKVCS-F-------------- 190 (312)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds---------~EG~~~~~-~-------------- 190 (312)
++|++||++..+||.+|...-..+ .+-..+|=..++.++.++.|. .+-.+++. .
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l--~~l~~~~~~~~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~ 122 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETA--TTLYNKYKSQGFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVN 122 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHH--HHHHHHHGGGTCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCSSCBBCCBCCS
T ss_pred CCCEEEEEEecCCCCCcHHHHHHH--HHHHHHhhhCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCCceeeccccC
Confidence 679999999999999999864322 111222223357777776541 12222222 1
Q ss_pred ------------------cCCCCCC---eEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhC
Q 021440 191 ------------------YNMDSIP---AVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRS 233 (312)
Q Consensus 191 ------------------Y~~~~~P---~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~~ 233 (312)
|.+..+| ++.|||+ .|+.+..+.|..+++++.+.|.+.|...
T Consensus 123 ~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~-~G~i~~~~~g~~~~~~l~~~i~~lL~~~ 185 (187)
T 3dwv_A 123 GENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDR-DGVPVERFSPGASVKDIEEKLIPLLGSA 185 (187)
T ss_dssp CC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECT-TSCEEEEECTTCCHHHHHHHHHHHC---
T ss_pred CcchhHHHHHHHhhcCCccCCCccccceeEEEECC-CCCEEEEECCCCCHHHHHHHHHHHHhcC
Confidence 1234567 9999997 6999999999999999999999887643
No 163
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=97.95 E-value=3e-05 Score=66.08 Aligned_cols=95 Identities=13% Similarity=0.124 Sum_probs=69.5
Q ss_pred cCCeEEEEee-cCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChh-----------------------HHHHHHh
Q 021440 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSE-----------------------GWKVCSF 190 (312)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~E-----------------------G~~~~~~ 190 (312)
.+||+||++. .+||..|...-..+ .....+|=..++.++.++.|.++ ...++..
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l--~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 107 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDV--QKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQ 107 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHH--HHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHH
T ss_pred CCCCEEEEEECCCCCcchHHHHHHH--HHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHH
Confidence 5799999999 99999999764432 11122222336778888777642 2356677
Q ss_pred cCCC------CCCeEEEEeCCCCeeEEEecCCC----ChHHHHHHHHHHHhh
Q 021440 191 YNMD------SIPAVLVIDPITGQKICSWCGMI----NPQPLGEMLLPFMDR 232 (312)
Q Consensus 191 Y~~~------~~P~i~IIdprTGe~v~~~~G~~----~~~~fl~~L~~fl~~ 232 (312)
|.+. .+|++.|||+ .|+.+..+.|.. +++++++.|......
T Consensus 108 ~~v~~~~~g~~~P~~~lid~-~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~~ 158 (187)
T 1we0_A 108 FDVLNEETGLADRGTFIIDP-DGVIQAIEINADGIGRDASTLINKVKAAQYV 158 (187)
T ss_dssp TTCEETTTTEECEEEEEECT-TSBEEEEEEECTTSCCCTTHHHHHHHHHHHH
T ss_pred hCCCcCCCCceeeEEEEECC-CCeEEEEEecCCCCCCCHHHHHHHHHHHhhh
Confidence 8886 8999999997 699998888764 688898888887753
No 164
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=97.93 E-value=1.4e-05 Score=64.72 Aligned_cols=99 Identities=18% Similarity=0.283 Sum_probs=71.6
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc--cEEEEEeccCChhHHHHHHhcCCCCCCe
Q 021440 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDSIPA 198 (312)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~--nFIfwq~~~ds~EG~~~~~~Y~~~~~P~ 198 (312)
-..+|.+++..+ ..+++++|+++.+||.+|+.|. +.+.++.++ +..|+.++++.. +..|.+.+.|+
T Consensus 9 t~~~f~~~v~~~-~~~~~vvv~F~a~wc~~C~~~~------p~l~~la~~~~~v~f~kvd~d~~-----~~~~~v~~~PT 76 (118)
T 3evi_A 9 SGNQYVNEVTNA-EEDVWVIIHLYRSSIPMCLLVN------QHLSLLARKFPETKFVKAIVNSC-----IQHYHDNCLPT 76 (118)
T ss_dssp CGGGHHHHTTTC-CTTCEEEEEEECTTSHHHHHHH------HHHHHHHHHCTTSEEEEEEGGGT-----STTCCGGGCSE
T ss_pred CHHHHHHHHHhc-CCCCeEEEEEeCCCChHHHHHH------HHHHHHHHHCCCCEEEEEEhHHh-----HHHCCCCCCCE
Confidence 345666665432 2345999999999999999996 455555554 367888888753 57899999999
Q ss_pred EEEEeCCCCeeEEEecCCCCh--HHH-HHHHHHHHhhC
Q 021440 199 VLVIDPITGQKICSWCGMINP--QPL-GEMLLPFMDRS 233 (312)
Q Consensus 199 i~IIdprTGe~v~~~~G~~~~--~~f-l~~L~~fl~~~ 233 (312)
++++- .|+.+..+.|..+- .+| .+.|..+|.+.
T Consensus 77 ~~~fk--~G~~v~~~~G~~~~gg~~~~~~~le~~L~~~ 112 (118)
T 3evi_A 77 IFVYK--NGQIEAKFIGIIECGGINLKLEELEWKLAEV 112 (118)
T ss_dssp EEEEE--TTEEEEEEESTTTTTCSSCCHHHHHHHHHTT
T ss_pred EEEEE--CCEEEEEEeChhhhCCCCCCHHHHHHHHHHc
Confidence 99997 59999998886421 122 55677777654
No 165
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=97.92 E-value=4.6e-05 Score=72.55 Aligned_cols=99 Identities=14% Similarity=0.153 Sum_probs=75.2
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcc------cCCCHHHHHHhhc-cEEEEEeccCChhHHHHHHhcCC
Q 021440 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRD------TWGNEAVSQIISV-NFIFWQEYDDTSEGWKVCSFYNM 193 (312)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRD------vw~~~~V~~~i~~-nFIfwq~~~ds~EG~~~~~~Y~~ 193 (312)
-..+|++++ ++++++||+++++||..| .+++. +| +.+.+.++. ++.|..++.+. ...+|+.|++
T Consensus 19 t~~~f~~~i----~~~~~vlV~FyApWC~~~-~~~~~l~~~~p~~--e~~a~~~~~~~v~~~~Vd~~~--~~~l~~~~~V 89 (367)
T 3us3_A 19 NAKNYKNVF----KKYEVLALLYHEPPEDDK-ASQRQFEMEELIL--ELAAQVLEDKGVGFGLVDSEK--DAAVAKKLGL 89 (367)
T ss_dssp CTTTHHHHH----HHCSEEEEEEECCCCSSH-HHHHHHHHHHHHH--HHHHHHHTTTTEEEEEEETTT--THHHHHHHTC
T ss_pred CHHHHHHHH----hhCCeEEEEEECCCchhH-HHhhhhccccHHH--HHHHHHhhcCCceEEEEeCcc--cHHHHHHcCC
Confidence 456788877 358999999999999886 55442 22 344555544 58899987774 4579999999
Q ss_pred CCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021440 194 DSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (312)
Q Consensus 194 ~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~ 231 (312)
..||+|.++. .|+.+ .+.|..+++.+++-|.+.+.
T Consensus 90 ~~~PTl~~f~--~G~~~-~y~G~~~~~~i~~~i~~~~~ 124 (367)
T 3us3_A 90 TEEDSIYVFK--EDEVI-EYDGEFSADTLVEFLLDVLE 124 (367)
T ss_dssp CSTTEEEEEE--TTEEE-ECCSCCSHHHHHHHHHHHHS
T ss_pred CcCceEEEEE--CCcEE-EeCCCCCHHHHHHHHHHhcC
Confidence 9999999997 37754 78999999988887777653
No 166
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=97.87 E-value=7e-05 Score=60.69 Aligned_cols=86 Identities=13% Similarity=0.092 Sum_probs=65.6
Q ss_pred HHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhh-ccEEEEEeccCChhH--HHHHHhcCCC-CCCeEEEEeCCCC
Q 021440 132 ALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS-VNFIFWQEYDDTSEG--WKVCSFYNMD-SIPAVLVIDPITG 207 (312)
Q Consensus 132 Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~-~nFIfwq~~~ds~EG--~~~~~~Y~~~-~~P~i~IIdprTG 207 (312)
..+++|.++|+.|++||.+|.++.+ .+.++.+ .+.-|+.++++.... ..++..|++. ..|+++++- .|
T Consensus 20 ii~~~~~vvi~khatwCgpc~~~~~------~~e~~~~~~~v~~~~vdVde~r~~Sn~IA~~~~V~h~sPq~il~k--~G 91 (112)
T 3iv4_A 20 VIEENKYVFVLKHSETCPISANAYD------QFNKFLYERDMDGYYLIVQQERDLSDYIAKKTNVKHESPQAFYFV--NG 91 (112)
T ss_dssp HHHHCSEEEEEEECTTCHHHHHHHH------HHHHHHHHHTCCEEEEEGGGGHHHHHHHHHHHTCCCCSSEEEEEE--TT
T ss_pred HHhcCCCEEEEEECCcCHhHHHHHH------HHHHHhccCCceEEEEEeecCchhhHHHHHHhCCccCCCeEEEEE--CC
Confidence 3344999999999999999999964 4455553 456777777775443 4589999998 599999996 59
Q ss_pred eeEEE-ecCCCChHHHHHH
Q 021440 208 QKICS-WCGMINPQPLGEM 225 (312)
Q Consensus 208 e~v~~-~~G~~~~~~fl~~ 225 (312)
+.++. -.|.++.+.+.+.
T Consensus 92 ~~v~~~SH~~I~~~~l~~~ 110 (112)
T 3iv4_A 92 EMVWNRDHGDINVSSLAQA 110 (112)
T ss_dssp EEEEEEEGGGCSHHHHHHH
T ss_pred EEEEEeeccccCHHHHHHh
Confidence 99987 4567888866544
No 167
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=97.86 E-value=7.1e-05 Score=65.53 Aligned_cols=86 Identities=5% Similarity=0.005 Sum_probs=66.9
Q ss_pred HcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc--cEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCCCCeeEE
Q 021440 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKIC 211 (312)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~--nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdprTGe~v~ 211 (312)
..+++++|++.++||..|+.+. +.+.++.++ ++.|..++.+ +...++..|++..+|++.| .|+ +.
T Consensus 134 ~~~~~~~v~F~a~wC~~C~~~~------~~~~~~~~~~~~v~~~~vd~~--~~~~l~~~~~v~~~Pt~~~----~G~-~~ 200 (229)
T 2ywm_A 134 VDIPIEIWVFVTTSCGYCPSAA------VMAWDFALANDYITSKVIDAS--ENQDLAEQFQVVGVPKIVI----NKG-VA 200 (229)
T ss_dssp CCSCEEEEEEECTTCTTHHHHH------HHHHHHHHHCTTEEEEEEEGG--GCHHHHHHTTCCSSSEEEE----GGG-TE
T ss_pred cCCCeEEEEEECCCCcchHHHH------HHHHHHHHHCCCeEEEEEECC--CCHHHHHHcCCcccCEEEE----CCE-EE
Confidence 4456669999999999999996 444444443 5788877655 4556899999999999998 477 56
Q ss_pred EecCCCChHHHHHHHHHHHhh
Q 021440 212 SWCGMINPQPLGEMLLPFMDR 232 (312)
Q Consensus 212 ~~~G~~~~~~fl~~L~~fl~~ 232 (312)
.+.|..+.+++.+.|.+.+..
T Consensus 201 ~~~G~~~~~~l~~~l~~~~~~ 221 (229)
T 2ywm_A 201 EFVGAQPENAFLGYIMAVYEK 221 (229)
T ss_dssp EEESCCCHHHHHHHHHHHHHH
T ss_pred EeeCCCCHHHHHHHHHHHhhh
Confidence 689999999999888887754
No 168
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=97.85 E-value=3.2e-05 Score=63.97 Aligned_cols=87 Identities=14% Similarity=0.072 Sum_probs=62.4
Q ss_pred cCCeEEEEeecCCCcc-cchhhcccCCCHHHHHHhhc-------cEEEEEeccCC----hhH------------------
Q 021440 135 QDKWLLVNLQSTKEFS-SLMLNRDTWGNEAVSQIISV-------NFIFWQEYDDT----SEG------------------ 184 (312)
Q Consensus 135 ~~KwLLVniq~~~~f~-c~~lnRDvw~~~~V~~~i~~-------nFIfwq~~~ds----~EG------------------ 184 (312)
.+||+||++..+||.+ |+..-. .+.++.++ ++.++.++.|. ++.
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~------~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~ 107 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLL------ALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGS 107 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHH------HHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCC
T ss_pred CCCEEEEEEECCCCcchhHHHHH------HHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCC
Confidence 6899999999999998 987643 34444331 57777777552 221
Q ss_pred ----HHHHHhcC---------------CCCCCeEEEEeCCCCeeEEEecCCC--ChHHHHHHHHHH
Q 021440 185 ----WKVCSFYN---------------MDSIPAVLVIDPITGQKICSWCGMI--NPQPLGEMLLPF 229 (312)
Q Consensus 185 ----~~~~~~Y~---------------~~~~P~i~IIdprTGe~v~~~~G~~--~~~~fl~~L~~f 229 (312)
..+++.|. +..+|++.||| .|+.+..+.|.. +++++++.|.+.
T Consensus 108 ~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid--~G~i~~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 108 PEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK--EGRLVLLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp HHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE--TTEEEEEECHHHHTCHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE--CCEEEEEECCCCCCCHHHHHHHHHHh
Confidence 24444444 34679999999 699999998887 888888887653
No 169
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=97.84 E-value=3.5e-05 Score=65.35 Aligned_cols=91 Identities=11% Similarity=0.005 Sum_probs=59.0
Q ss_pred cCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccC--------Ch-hHHHHHHhcC-------------
Q 021440 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDD--------TS-EGWKVCSFYN------------- 192 (312)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~d--------s~-EG~~~~~~Y~------------- 192 (312)
++||+||++..+||..|...-..+ .+-..+|-..++.++.++.| +. +-.+++..|+
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l--~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~p~~~~~d~~~ 123 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQL--VDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNG 123 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHH--HHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHTTTCCSEEBCCCCCSS
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHH--HHHHHHHhcCCeEEEEEECCCCCCCCCCCHHHHHHHHHHcCCCceEEeeeccCC
Confidence 579999999999999997764332 11122222235777777654 11 2223333221
Q ss_pred -----------------------CCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHH
Q 021440 193 -----------------------MDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLP 228 (312)
Q Consensus 193 -----------------------~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~ 228 (312)
+..+|++.|||+ .|+.+..+.|..+++++.+.|.+
T Consensus 124 ~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~i~~ 181 (183)
T 2obi_A 124 DDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDK-NGCVVKRYGPMEEPLVIEKDLPH 181 (183)
T ss_dssp TTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECT-TSCEEEEECTTSCTHHHHTTSGG
T ss_pred cchhHHHHHhhccCCCCCcccccccccceEEEECC-CCCEEEEeCCCCCHHHHHHHHHH
Confidence 223599999997 69999999998888887665543
No 170
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=97.81 E-value=9.8e-05 Score=62.53 Aligned_cols=94 Identities=12% Similarity=0.061 Sum_probs=66.4
Q ss_pred cCCeEEEEeecCCCcccchhhcccCCCHHHHHHh-hccEEEEEeccC--------C-hhHHHHHHh-cCCC---------
Q 021440 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQII-SVNFIFWQEYDD--------T-SEGWKVCSF-YNMD--------- 194 (312)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i-~~nFIfwq~~~d--------s-~EG~~~~~~-Y~~~--------- 194 (312)
++|++||++..+||.+|...-..+ ..+.+-+ ..++.++.++.+ + .+-.++++. |.+.
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l---~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~d~ 113 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGL---KELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKI 113 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHH---HHHHHHHTTTSEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCC
T ss_pred CCCEEEEEEEecCCCCcHHHHHHH---HHHHHHhccCCeEEEEEECCccccCCCCCHHHHHHHHHHhcCCCCceeeeeec
Confidence 689999999999999999864332 2222222 335888888754 2 233456666 4431
Q ss_pred -----------------CCCe----EEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021440 195 -----------------SIPA----VLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (312)
Q Consensus 195 -----------------~~P~----i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~ 232 (312)
.+|. ..|||+ .|+.+..+.|..+++++.+.|.+.|++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~p~~~~~~~lid~-~G~i~~~~~g~~~~~~l~~~i~~lL~~ 171 (180)
T 3kij_A 114 LGSEGEPAFRFLVDSSKKEPRWNFWKYLVNP-EGQVVKFWRPEEPIEVIRPDIAALVRQ 171 (180)
T ss_dssp SSTTCCHHHHHHHHHHTCCCSSTTCEEEECT-TSCEEEEECTTCCGGGTHHHHHHHHHH
T ss_pred cCccccHHHHHHHhcCCCCccccceEEEECC-CCCEEEEECCCCCHHHHHHHHHHHHHH
Confidence 2566 899997 699999999999998888888777754
No 171
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=97.80 E-value=6.5e-05 Score=64.28 Aligned_cols=93 Identities=12% Similarity=0.089 Sum_probs=67.3
Q ss_pred cCCeEEEEee-cCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChh--------------------------HHHH
Q 021440 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSE--------------------------GWKV 187 (312)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~E--------------------------G~~~ 187 (312)
.+||+||++. .+||..|...-..+ .....+|-..++.++.++.|+.+ ...+
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l--~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~ 107 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIAL--DKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSI 107 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHH--HHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHH--HHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHH
Confidence 5799999999 99999999764433 11222333357888888887644 1356
Q ss_pred HHhcCCC-----CCCeEEEEeCCCCeeEEEecCCC----ChHHHHHHHHHHH
Q 021440 188 CSFYNMD-----SIPAVLVIDPITGQKICSWCGMI----NPQPLGEMLLPFM 230 (312)
Q Consensus 188 ~~~Y~~~-----~~P~i~IIdprTGe~v~~~~G~~----~~~~fl~~L~~fl 230 (312)
+..|.+. .+|++.|||+ .|+.+..+.|.. +.+++++.|....
T Consensus 108 ~~~~gv~~~~g~~~P~~~liD~-~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 108 ARSYDVLFNESVALRAFVLIDK-QGVVQHLLVNNLALGRSVDEILRLIDALQ 158 (192)
T ss_dssp HHHTTCEETTTEECCEEEEECT-TSBEEEEEEGGGSSGGGHHHHHHHHHHHH
T ss_pred HHHhCCcCcCCceeeEEEEEcC-CCEEEEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 7788887 8999999997 699888877742 4677777777665
No 172
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=97.79 E-value=7.3e-05 Score=66.11 Aligned_cols=95 Identities=14% Similarity=0.086 Sum_probs=69.2
Q ss_pred cCCeEEEEee-cCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChh--------------------------HHHH
Q 021440 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSE--------------------------GWKV 187 (312)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~E--------------------------G~~~ 187 (312)
.+||+||++. .+||+.|...-..+ .....+|-..++.++.++.|+.+ ...+
T Consensus 55 ~Gk~vll~F~pa~~Cp~C~~~~~~l--~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i 132 (220)
T 1zye_A 55 KGKYLVLFFYPLDFTFVCPTEIIAF--SDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQI 132 (220)
T ss_dssp TTSEEEEEECSCTTCSSSHHHHHHH--HHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHH--HHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHH
Confidence 4699999999 99999999764433 11223333457888888877643 2356
Q ss_pred HHhcCCC------CCCeEEEEeCCCCeeEEEecCCC----ChHHHHHHHHHHHhh
Q 021440 188 CSFYNMD------SIPAVLVIDPITGQKICSWCGMI----NPQPLGEMLLPFMDR 232 (312)
Q Consensus 188 ~~~Y~~~------~~P~i~IIdprTGe~v~~~~G~~----~~~~fl~~L~~fl~~ 232 (312)
+..|.+. .+|++.|||+ .|+.+..+.|.. +.+++++.|......
T Consensus 133 ~~~ygv~~~~~g~~~P~~~liD~-~G~I~~~~~g~~~~~~~~~ell~~l~~l~~~ 186 (220)
T 1zye_A 133 SRDYGVLLEGPGLALRGLFIIDP-NGVIKHLSVNDLPVGRSVEETLRLVKAFQFV 186 (220)
T ss_dssp HHHTTCEETTTTEECEEEEEECT-TSBEEEEEEECTTCCCCHHHHHHHHHHHHHT
T ss_pred HHHhCCeecCCCcccceEEEECC-CCEEEEEEecCCCCCCCHHHHHHHHHHhhhh
Confidence 7788887 8999999997 699888877753 568888888876643
No 173
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=97.78 E-value=5.6e-05 Score=65.44 Aligned_cols=93 Identities=12% Similarity=0.107 Sum_probs=67.4
Q ss_pred cCCeEEEEee-cCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChh--------------------------HHHH
Q 021440 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSE--------------------------GWKV 187 (312)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~E--------------------------G~~~ 187 (312)
.+||+||++. .+||+.|...-..+ .+-..+|-..++.++.++.|+.+ ...+
T Consensus 35 ~gk~vvl~F~~~~~C~~C~~~~~~l--~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~ 112 (202)
T 1uul_A 35 KGKWLVLFFYPMDFTFVCPTEICQF--SDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCI 112 (202)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHH--HHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHH
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHH--HHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHH
Confidence 5799999999 99999999765432 11222333346888888887643 2356
Q ss_pred HHhcCCC------CCCeEEEEeCCCCeeEEEecCCC----ChHHHHHHHHHHH
Q 021440 188 CSFYNMD------SIPAVLVIDPITGQKICSWCGMI----NPQPLGEMLLPFM 230 (312)
Q Consensus 188 ~~~Y~~~------~~P~i~IIdprTGe~v~~~~G~~----~~~~fl~~L~~fl 230 (312)
+..|.+. .+|++.|||+ .|+.+..+.|.. +.+++++.|....
T Consensus 113 ~~~ygv~~~~~g~~~P~~~lid~-~G~i~~~~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 113 MKSYGVLKEEDGVAYRGLFIIDP-KQNLRQITVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp HHHHTCEETTTTEECEEEEEECT-TSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHcCCccCCCCceeeEEEEECC-CCEEEEEEeCCCCCCCCHHHHHHHHHHhh
Confidence 6778887 8999999997 699888877753 4588888877765
No 174
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=97.75 E-value=0.00012 Score=63.76 Aligned_cols=92 Identities=16% Similarity=0.224 Sum_probs=70.7
Q ss_pred HcCCeEEEEeecC-CCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCCCCeeE-E
Q 021440 134 AQDKWLLVNLQST-KEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKI-C 211 (312)
Q Consensus 134 ~~~KwLLVniq~~-~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdprTGe~v-~ 211 (312)
.+++.+||+++++ ||..|+.+...+ +++.+. ..++.|..++.+.++...++..|++..+|++.|+. .|+.. .
T Consensus 20 ~~~~v~lv~f~~~~~C~~C~~~~~~~---~~la~~-~~~v~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~~--~g~~~~~ 93 (226)
T 1a8l_A 20 MVNPVKLIVFVRKDHCQYCDQLKQLV---QELSEL-TDKLSYEIVDFDTPEGKELAKRYRIDRAPATTITQ--DGKDFGV 93 (226)
T ss_dssp CCSCEEEEEEECSSSCTTHHHHHHHH---HHHHTT-CTTEEEEEEETTSHHHHHHHHHTTCCSSSEEEEEE--TTBCCSE
T ss_pred cCCCeEEEEEecCCCCchhHHHHHHH---HHHHhh-CCceEEEEEeCCCcccHHHHHHcCCCcCceEEEEc--CCceeeE
Confidence 4567788999999 999999996432 223332 35788999999988889999999999999999995 36553 5
Q ss_pred EecCCCChHHHHHHHHHHHh
Q 021440 212 SWCGMINPQPLGEMLLPFMD 231 (312)
Q Consensus 212 ~~~G~~~~~~fl~~L~~fl~ 231 (312)
.+.|....+++...+...++
T Consensus 94 ~~~G~~~~~~l~~~l~~~l~ 113 (226)
T 1a8l_A 94 RYFGLPAGHEFAAFLEDIVD 113 (226)
T ss_dssp EEESCCCTTHHHHHHHHHHH
T ss_pred EEeccCcHHHHHHHHHHHHh
Confidence 67888877777777766664
No 175
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=97.75 E-value=7e-05 Score=64.13 Aligned_cols=86 Identities=13% Similarity=-0.022 Sum_probs=61.4
Q ss_pred HcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc--cEEEEEeccCChhHHHHHHhcC---CCCCCeEEEEeCCCCe
Q 021440 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVCSFYN---MDSIPAVLVIDPITGQ 208 (312)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~--nFIfwq~~~ds~EG~~~~~~Y~---~~~~P~i~IIdprTGe 208 (312)
..+|.++|++..+||.+|+.+. |.+.++..+ ++.|..++.| +...++..|. +.++|+++|+|. .|+
T Consensus 52 ~~~k~vvv~F~A~WC~pC~~~~------P~l~~l~~~~~~v~~~~v~~d--~~~~~~~~~~~~~v~~iPt~i~~~~-~G~ 122 (167)
T 1z6n_A 52 IERRYRLLVAGEMWCPDCQINL------AALDFAQRLQPNIELAIISKG--RAEDDLRQRLALERIAIPLVLVLDE-EFN 122 (167)
T ss_dssp CCSCEEEEEECCTTCHHHHHHH------HHHHHHHHHCTTEEEEEECHH--HHHHHTTTTTTCSSCCSSEEEEECT-TCC
T ss_pred hCCCEEEEEEECCCChhHHHHH------HHHHHHHHHCCCcEEEEEECC--CCHHHHHHHHHcCCCCcCeEEEECC-CCC
Confidence 3579999999999999999984 445555443 5777776554 4566777776 899999999996 578
Q ss_pred eEEEecCCCChHHHHHHHHHHH
Q 021440 209 KICSWCGMINPQPLGEMLLPFM 230 (312)
Q Consensus 209 ~v~~~~G~~~~~~fl~~L~~fl 230 (312)
.+..|.| .|....+.+.++.
T Consensus 123 ~~~~~g~--~p~~~~~~i~~~~ 142 (167)
T 1z6n_A 123 LLGRFVE--RPQAVLDGGPQAL 142 (167)
T ss_dssp EEEEEES--SCHHHHHHCHHHH
T ss_pred EEEEEcC--CCHHHHHhHHHHH
Confidence 8777743 3444445444443
No 176
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=97.75 E-value=3.7e-05 Score=66.22 Aligned_cols=93 Identities=9% Similarity=0.031 Sum_probs=66.9
Q ss_pred cCCeEEEEee-cCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChh--------------------------HHHH
Q 021440 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSE--------------------------GWKV 187 (312)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~E--------------------------G~~~ 187 (312)
.+||+||++. .+||..|...-..+ .....+|-..++.++.++.|+.+ ...+
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l--~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~ 110 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAF--SNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRL 110 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHH--HHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHH--HHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHH
Confidence 5799999999 99999999875433 11122333346888888887643 2256
Q ss_pred HHhcCCC------CCCeEEEEeCCCCeeEEEecCCC----ChHHHHHHHHHHH
Q 021440 188 CSFYNMD------SIPAVLVIDPITGQKICSWCGMI----NPQPLGEMLLPFM 230 (312)
Q Consensus 188 ~~~Y~~~------~~P~i~IIdprTGe~v~~~~G~~----~~~~fl~~L~~fl 230 (312)
+..|.+. .+|++.|||+ .|+.+..+.|.. +.+++++.|....
T Consensus 111 ~~~~gv~~~~~~~~~P~~~lid~-~G~i~~~~~g~~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 111 SEDYGVLKTDEGIAYRGLFIIDG-KGVLRQITVNDLPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp HHHTTCEETTTTEECEEEEEECT-TSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHcCCccCCCCceeeEEEEECC-CCcEEEEEeCCCCCCCCHHHHHHHHHhcc
Confidence 7778876 7999999997 699888887754 4577777776654
No 177
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=97.75 E-value=0.00015 Score=58.85 Aligned_cols=88 Identities=14% Similarity=0.057 Sum_probs=68.2
Q ss_pred HcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhh---ccEEEEEeccCChhHHHHHHhcCCCC--CCeEEEEeCCCCe
Q 021440 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS---VNFIFWQEYDDTSEGWKVCSFYNMDS--IPAVLVIDPITGQ 208 (312)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~---~nFIfwq~~~ds~EG~~~~~~Y~~~~--~P~i~IIdprTGe 208 (312)
...+.++|++.++ |.+|+++. +.+.++.+ ..+.|..+|.+ +..+++..|++.+ .|+++|++...|+
T Consensus 21 ~~~~pv~v~f~a~-~~~c~~~~------p~l~~~A~~~~gk~~f~~vd~d--~~~~~a~~~gi~~~~iPtl~i~~~~~g~ 91 (133)
T 2djk_A 21 SAGIPLAYIFAET-AEERKELS------DKLKPIAEAQRGVINFGTIDAK--AFGAHAGNLNLKTDKFPAFAIQEVAKNQ 91 (133)
T ss_dssp HTTSCEEEEECSC-SSSHHHHH------HHHHHHHHSSTTTSEEEEECTT--TTGGGTTTTTCCSSSSSEEEEECTTTCC
T ss_pred cCCCCEEEEEecC-hhhHHHHH------HHHHHHHHHhCCeEEEEEEchH--HhHHHHHHcCCCcccCCEEEEEecCcCc
Confidence 5678999999998 78999774 44555554 45888888876 4456899999988 9999999853466
Q ss_pred eEEEec--CCCChHHHHHHHHHHHh
Q 021440 209 KICSWC--GMINPQPLGEMLLPFMD 231 (312)
Q Consensus 209 ~v~~~~--G~~~~~~fl~~L~~fl~ 231 (312)
.. ... |.++.+.+.+.|.+|++
T Consensus 92 ~~-~~~~~g~~~~~~l~~fi~~~l~ 115 (133)
T 2djk_A 92 KF-PFDQEKEITFEAIKAFVDDFVA 115 (133)
T ss_dssp BC-CCCSSSCCCHHHHHHHHHHHHH
T ss_pred cc-CCCCccccCHHHHHHHHHHHHc
Confidence 63 554 99999998888888886
No 178
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=97.73 E-value=4e-05 Score=65.15 Aligned_cols=93 Identities=10% Similarity=0.054 Sum_probs=62.7
Q ss_pred cCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccC--------Ch-hHHHHHHh-cC------------
Q 021440 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDD--------TS-EGWKVCSF-YN------------ 192 (312)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~d--------s~-EG~~~~~~-Y~------------ 192 (312)
++||+||++..+||.+|...-..+ .+-..+|-+.++.++.++.+ +. +-.++++. |+
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l--~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~ 125 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRAL--QQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVT 125 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHH--HHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCS
T ss_pred CCCEEEEEEeccCCCCcHHHHHHH--HHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeEeecccC
Confidence 579999999999999999754332 11122233345778877764 22 22345444 22
Q ss_pred -----------CCCCC-------eEEEEeCCCCeeEEEecCCCChHHHHHHHHHHH
Q 021440 193 -----------MDSIP-------AVLVIDPITGQKICSWCGMINPQPLGEMLLPFM 230 (312)
Q Consensus 193 -----------~~~~P-------~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl 230 (312)
+..+| ++.|||+ .|+.+..+.|..+++++.+.|.+.|
T Consensus 126 g~~~~~~~~~~~~~~P~~~~~~~~~~lid~-~G~i~~~~~g~~~~~~l~~~i~~ll 180 (181)
T 2p31_A 126 GTGAHPAFKYLAQTSGKEPTWNFWKYLVAP-DGKVVGAWDPTVSVEEVRPQITALV 180 (181)
T ss_dssp STTSCHHHHHHHHHHSCCCCSTTCEEEECT-TSCEEEEECTTSCHHHHHHHHHTTC
T ss_pred CccchhhhhhhhhcCCCccccceeEEEEcC-CCCEEEEeCCCCCHHHHHHHHHHHh
Confidence 22467 8999997 6999999999889988877776543
No 179
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=97.72 E-value=0.00019 Score=62.10 Aligned_cols=96 Identities=10% Similarity=0.022 Sum_probs=65.6
Q ss_pred cCCeEEEEeecCCCcc-cchhhcccCCCHHHHHHhh----ccEEEEEeccC----Chh----------------------
Q 021440 135 QDKWLLVNLQSTKEFS-SLMLNRDTWGNEAVSQIIS----VNFIFWQEYDD----TSE---------------------- 183 (312)
Q Consensus 135 ~~KwLLVniq~~~~f~-c~~lnRDvw~~~~V~~~i~----~nFIfwq~~~d----s~E---------------------- 183 (312)
.+||+||++..+||.+ |...-..+ ..+.+-+. .++.++.++.| +++
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l---~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d~ 116 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKL---GLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFDE 116 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHH---HHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTSCTTCEEEECCHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHH---HHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHcCCCceEEeCCHHH
Confidence 5799999999999998 98753322 11222222 25655556555 221
Q ss_pred HHHHHHhcCCC-CC---------------CeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhCC
Q 021440 184 GWKVCSFYNMD-SI---------------PAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRSP 234 (312)
Q Consensus 184 G~~~~~~Y~~~-~~---------------P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~~~ 234 (312)
...+++.|.+. .. |++.|||+ .|+.+..+.|..+++++.+.|.+.|+...
T Consensus 117 ~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~-~G~i~~~~~g~~~~~~~~~~i~~~l~~l~ 182 (200)
T 2b7k_A 117 VKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDP-EGQFVDALGRNYDEKTGVDKIVEHVKSYV 182 (200)
T ss_dssp HHHHHHHTTC--------------CTTTCCCEEEECT-TSCEEEEECTTCCTTHHHHHHHHHHHHCC
T ss_pred HHHHHHHcCcEEeeccccCCCCCceeeecceEEEECC-CCcEEEEeCCCCCHHHHHHHHHHHHHHhh
Confidence 23566677764 33 37899997 69999999998899999999999988743
No 180
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=97.71 E-value=2.6e-05 Score=80.85 Aligned_cols=97 Identities=13% Similarity=0.171 Sum_probs=68.3
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEE
Q 021440 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLV 201 (312)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~I 201 (312)
..+|++++ +.++.+||+++++||..|+.|...+ +.+.+-+...+.|..++.+.. ..+++.|++..||++.+
T Consensus 123 ~~~f~~~i----~~~~~~lv~Fya~wC~~C~~~~p~~---~~~a~~~~~~v~~~~vd~~~~--~~l~~~~~v~~~Pt~~~ 193 (780)
T 3apo_A 123 RREFDAAV----NSGELWFVNFYSPGSSHSHDLAPTW---REFAKEVDGLLRIGAVNCGDD--RMLCRMKGVNSYPSLFI 193 (780)
T ss_dssp HHHHHHHH----TSSSCEEEEEECSSCHHHHHHHHHH---HHHHHHTTTTSEEEEEETTTC--SSCC--------CEEEE
T ss_pred hHhHHhhh----cCCCcEEEEEeCCCCcchhHhhHHH---HHHHHHhcCceEEEEEeCCCc--HHHHHHcCCceeeeEEE
Confidence 34566666 7799999999999999999997654 456666666788888877654 56889999999999999
Q ss_pred EeCCCCeeEEEecCCCChHHHHHHHHHH
Q 021440 202 IDPITGQKICSWCGMINPQPLGEMLLPF 229 (312)
Q Consensus 202 IdprTGe~v~~~~G~~~~~~fl~~L~~f 229 (312)
+. .|+.+..+.|..+.+.+++.|.+.
T Consensus 194 ~~--~g~~~~~~~G~~~~~~l~~~l~~~ 219 (780)
T 3apo_A 194 FR--SGMAAVKYNGDRSKESLVAFAMQH 219 (780)
T ss_dssp EC--TTSCCEECCSCSCHHHHHHHHHTT
T ss_pred Ee--CCcEeeEecCCCCHHHHHHHHHHh
Confidence 84 588788899988887766655443
No 181
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=97.70 E-value=0.0001 Score=64.76 Aligned_cols=98 Identities=10% Similarity=0.072 Sum_probs=69.0
Q ss_pred cCCe-EEEEeecCCCcccchhhcccCCCHHHHH-HhhccEEEEEeccCCh---------------------------hHH
Q 021440 135 QDKW-LLVNLQSTKEFSSLMLNRDTWGNEAVSQ-IISVNFIFWQEYDDTS---------------------------EGW 185 (312)
Q Consensus 135 ~~Kw-LLVniq~~~~f~c~~lnRDvw~~~~V~~-~i~~nFIfwq~~~ds~---------------------------EG~ 185 (312)
.+|+ +||++..+||..|...-..+ .++.+ |-..++.|+.++.+.. ...
T Consensus 57 ~gk~~vll~F~a~~C~~C~~~~~~l---~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~ 133 (218)
T 3u5r_E 57 KDSPALLVAFISNRCPFVVLIREAL---AKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQ 133 (218)
T ss_dssp TTCSEEEEEECCSSCHHHHTTHHHH---HHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTC
T ss_pred CCCCeEEEEEECCCCccHHHHHHHH---HHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCcc
Confidence 4787 99999999999998775433 22222 2233588888887532 134
Q ss_pred HHHHhcCCCCCCeEEEEeCCCCeeEEEec---------CCCChHHHHHHHHHHHhhCCCC
Q 021440 186 KVCSFYNMDSIPAVLVIDPITGQKICSWC---------GMINPQPLGEMLLPFMDRSPRK 236 (312)
Q Consensus 186 ~~~~~Y~~~~~P~i~IIdprTGe~v~~~~---------G~~~~~~fl~~L~~fl~~~~~~ 236 (312)
.++..|.+..+|++.|||+ .|+.+..+. |..+.+++.+.|...+...+..
T Consensus 134 ~~~~~~~v~~~P~~~liD~-~G~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~~~~~~ 192 (218)
T 3u5r_E 134 SVAKAYGAACTPDFFLYDR-ERRLVYHGQFDDARPGNGKDVTGADLRAAVDAVLKGKDVG 192 (218)
T ss_dssp HHHHHHTCCEESEEEEECT-TCBEEEEECSSSCCTTSCCCCCCHHHHHHHHHHHTTCCCC
T ss_pred HHHHHcCCCCCCeEEEECC-CCcEEEeccccccccccccccCHHHHHHHHHHHHcCCCCC
Confidence 6778899999999999997 688875521 2345788888888888766554
No 182
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=97.70 E-value=0.0001 Score=64.87 Aligned_cols=93 Identities=14% Similarity=0.078 Sum_probs=67.4
Q ss_pred cCCeEEEEee-cCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhH--------------------------HHH
Q 021440 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEG--------------------------WKV 187 (312)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG--------------------------~~~ 187 (312)
.+||+||++. .+||+.|...-..+ .+...+|-..++.++.++.|+++. ..+
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l--~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~ 128 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIAL--DKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSI 128 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHH--HHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHH--HHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHH
Confidence 5799999999 99999998875432 122233334578888888776432 346
Q ss_pred HHhcCCC-----CCCeEEEEeCCCCeeEEEecCCC----ChHHHHHHHHHHH
Q 021440 188 CSFYNMD-----SIPAVLVIDPITGQKICSWCGMI----NPQPLGEMLLPFM 230 (312)
Q Consensus 188 ~~~Y~~~-----~~P~i~IIdprTGe~v~~~~G~~----~~~~fl~~L~~fl 230 (312)
+..|.+. .+|++.|||+ .|+.+..+.|.. +.+++++.|....
T Consensus 129 ~~~ygv~~~~g~~~p~~~lID~-~G~i~~~~~~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 129 SKDYNVLFDDSVSLRAFVLIDM-NGIVQHLLVNNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp HHHTTCEETTTEECEEEEEECT-TSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHHhCCccccCCcccEEEEECC-CCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 6777777 7999999997 699888876643 4788888887765
No 183
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=97.69 E-value=0.00016 Score=63.46 Aligned_cols=94 Identities=9% Similarity=0.033 Sum_probs=63.1
Q ss_pred cCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccC--------C-hhHHHHHH------hcCC------
Q 021440 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDD--------T-SEGWKVCS------FYNM------ 193 (312)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~d--------s-~EG~~~~~------~Y~~------ 193 (312)
++|++|||+..+||.+|...-..+ ++-..+|=..++.++.++.+ + .+-.+|+. .|.+
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l--~~l~~~~~~~g~~vv~v~~d~~~~~e~d~~~~i~~f~~~~~~~~~~~~~fp~l~ 123 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQM--NELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFE 123 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHH--HHHHHHHGGGTEEEEEEECCCSTTTTCSCHHHHHHHHHHTSSCTTCCCSSEEBC
T ss_pred CCCEEEEEEECCCCccHHHHHHHH--HHHHHHccCCCeEEEEEECCcccccCCCCHHHHHHHHHhcccccccccceEEEE
Confidence 679999999999999998742221 11112222345777777664 1 12234443 2221
Q ss_pred -----------------------------------------------CCCCeEEEEeCCCCeeEEEecCCCChHHHHHHH
Q 021440 194 -----------------------------------------------DSIPAVLVIDPITGQKICSWCGMINPQPLGEML 226 (312)
Q Consensus 194 -----------------------------------------------~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L 226 (312)
...|+..|||+ .|+.+..|.|..+++++.+.|
T Consensus 124 d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~tflID~-~G~i~~~~~g~~~~~~l~~~I 202 (208)
T 2f8a_A 124 KCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGP-DGVPLRRYSRRFQTIDIEPDI 202 (208)
T ss_dssp CCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTTCEEEECT-TSCEEEEECTTSCGGGGHHHH
T ss_pred EeecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCccccCceEEEEcC-CCcEEEEeCCCCCHHHHHHHH
Confidence 22388999996 699999999999999988888
Q ss_pred HHHHh
Q 021440 227 LPFMD 231 (312)
Q Consensus 227 ~~fl~ 231 (312)
.+.|.
T Consensus 203 ~~ll~ 207 (208)
T 2f8a_A 203 EALLS 207 (208)
T ss_dssp HHHHC
T ss_pred HHHhh
Confidence 87764
No 184
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=97.69 E-value=7.7e-05 Score=63.57 Aligned_cols=92 Identities=11% Similarity=0.023 Sum_probs=60.0
Q ss_pred cCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCC--------h-hHHHHHHhcCC------------
Q 021440 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDT--------S-EGWKVCSFYNM------------ 193 (312)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds--------~-EG~~~~~~Y~~------------ 193 (312)
++||+||++..+||..|...-..+ .+-..+|-..++.++.++.|. + +-.++++.|++
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l--~~l~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~ 125 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQL--VDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNG 125 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHH--HHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHTTCCSEEBCCCBSSS
T ss_pred CCCEEEEEEecCCCCchHHHHHHH--HHHHHHhhcCCeEEEEEECcccCCCCCCCHHHHHHHHHHcCCCCeeeeeeccCC
Confidence 579999999999999997653322 111122223357777776542 1 22334433322
Q ss_pred ------------------------CCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHH
Q 021440 194 ------------------------DSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPF 229 (312)
Q Consensus 194 ------------------------~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~f 229 (312)
..+|++.|||+ .|+.+..+.|..+++++.+.|.+.
T Consensus 126 ~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~-~G~i~~~~~g~~~~~~l~~~i~~l 184 (185)
T 2gs3_A 126 DDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDK-NGCVVKRYGPMEEPLVIEKDLPHY 184 (185)
T ss_dssp TTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECT-TSCEEEEECTTSCGGGGGGGHHHH
T ss_pred hhhhHHHHHHHhhcccccccCCcccccceEEEECC-CCCEEEeeCCCCCHHHHHHHHHHh
Confidence 12489999997 699999999988888887777654
No 185
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=96.86 E-value=5.7e-06 Score=68.16 Aligned_cols=97 Identities=9% Similarity=0.003 Sum_probs=61.0
Q ss_pred HHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHh-hccEEEEEeccCCh--hHHHHH----------------
Q 021440 128 AKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQII-SVNFIFWQEYDDTS--EGWKVC---------------- 188 (312)
Q Consensus 128 A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i-~~nFIfwq~~~ds~--EG~~~~---------------- 188 (312)
....+.-++|++||++..+||..|+.+-..+ ...-..++- +.++.++.++.+.. ...++.
T Consensus 25 ~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l-~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~ 103 (159)
T 2ls5_A 25 QVTLSSLRGKVVMLQFTASWCGVCRKEMPFI-EKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGAD 103 (159)
Confidence 3444445789999999999999998875543 221112232 45677777776643 223343
Q ss_pred --HhcC--CCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHH
Q 021440 189 --SFYN--MDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLL 227 (312)
Q Consensus 189 --~~Y~--~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~ 227 (312)
..|. +..+|++.|||+ .|+.+..+.|. +++++.+.|.
T Consensus 104 ~~~~~~~~~~~~P~~~lid~-~G~i~~~~~g~-~~~~l~~~l~ 144 (159)
T 2ls5_A 104 IFAKYALRDAGITRNVLIDR-EGKIVKLTRLY-NEEEFASLVQ 144 (159)
Confidence 3333 345999999997 69988888774 4444444333
No 186
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=97.67 E-value=0.00024 Score=58.80 Aligned_cols=93 Identities=8% Similarity=0.006 Sum_probs=60.9
Q ss_pred cCCeEEEEeecCCCc-ccchhhcccCCCHHHHHHhhc---cEEEEEeccC----Chh-HHHHHHh---------------
Q 021440 135 QDKWLLVNLQSTKEF-SSLMLNRDTWGNEAVSQIISV---NFIFWQEYDD----TSE-GWKVCSF--------------- 190 (312)
Q Consensus 135 ~~KwLLVniq~~~~f-~c~~lnRDvw~~~~V~~~i~~---nFIfwq~~~d----s~E-G~~~~~~--------------- 190 (312)
.+||+||++..+||. .|...-..+ ..+.+-+++ ++.++.++.| +++ -.+++..
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l---~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~ 108 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHM---TDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYS 108 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHH---HHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSC
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHH---HHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCC
Confidence 579999999999999 897643322 222222322 2666666554 222 1122211
Q ss_pred ----------------------cCCCCCCeEEEEeCCCCeeEEEecCCC--ChHHHHHHHHHHHh
Q 021440 191 ----------------------YNMDSIPAVLVIDPITGQKICSWCGMI--NPQPLGEMLLPFMD 231 (312)
Q Consensus 191 ----------------------Y~~~~~P~i~IIdprTGe~v~~~~G~~--~~~~fl~~L~~fl~ 231 (312)
|.+...|++.|||+ .|+.+..+.|.. +++++++.|.+.+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~-~G~i~~~~~g~~~~~~~~l~~~l~~ll~ 172 (174)
T 1xzo_A 109 QSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGP-DGKVLKDYNGVENTPYDDIISDVKSAST 172 (174)
T ss_dssp HHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECT-TSEEEEEEESSSSCCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECC-CCeEEEEEcCCCCCCHHHHHHHHHHHHh
Confidence 33456899999997 699999999875 57889998888764
No 187
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=97.64 E-value=6.3e-05 Score=73.95 Aligned_cols=98 Identities=11% Similarity=0.097 Sum_probs=72.3
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhh---ccEEEEEeccCChhHHHHHHhcCCCCCCe
Q 021440 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS---VNFIFWQEYDDTSEGWKVCSFYNMDSIPA 198 (312)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~---~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~ 198 (312)
..+|++.. ...+|.+||+++++||..|+.|...+ ..+.+-+. .+++|..++.+..+ ... |.+..||+
T Consensus 365 ~~~f~~~v---~~~~k~vlv~F~a~wC~~C~~~~p~~---~~l~~~~~~~~~~v~~~~vd~~~~~---~~~-~~v~~~Pt 434 (504)
T 2b5e_A 365 GKNHDEIV---NDPKKDVLVLYYAPWCGHCKRLAPTY---QELADTYANATSDVLIAKLDHTEND---VRG-VVIEGYPT 434 (504)
T ss_dssp TTTHHHHH---HCTTCCEEEEEECTTCHHHHHHHHHH---HHHHHHHHHHCSSCEEEEEEGGGCC---CSS-CCCSSSSE
T ss_pred cccHHHhh---ccCCCCEEEEEECCCChhHHHHhHHH---HHHHHHhhccCCcEEEEEecCCccc---ccc-CCceecCe
Confidence 44566654 55789999999999999999997644 23444333 37999999876544 223 99999999
Q ss_pred EEEEeCCCCee--EEEecCCCChHHHHHHHHHHHh
Q 021440 199 VLVIDPITGQK--ICSWCGMINPQPLGEMLLPFMD 231 (312)
Q Consensus 199 i~IIdprTGe~--v~~~~G~~~~~~fl~~L~~fl~ 231 (312)
+.++ + .|+. +..+.|..+.++|++.|.+.+.
T Consensus 435 ~~~~-~-~G~~~~~~~~~G~~~~~~l~~~i~~~~~ 467 (504)
T 2b5e_A 435 IVLY-P-GGKKSESVVYQGSRSLDSLFDFIKENGH 467 (504)
T ss_dssp EEEE-C-CTTSCCCCBCCSCCCHHHHHHHHHHHCT
T ss_pred EEEE-e-CCceecceEecCCCCHHHHHHHHHhcCC
Confidence 9999 3 4765 5668898898888777776543
No 188
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=97.59 E-value=7.2e-05 Score=74.38 Aligned_cols=103 Identities=10% Similarity=0.094 Sum_probs=70.6
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhh--------ccEEEEEeccCChhHHHHHHhcCCC
Q 021440 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS--------VNFIFWQEYDDTSEGWKVCSFYNMD 194 (312)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~--------~nFIfwq~~~ds~EG~~~~~~Y~~~ 194 (312)
.+|++++ ++..+|.+||+++.+||.+|+.|...+ ..+.+-+. .++.|..++.+. ...++..|++.
T Consensus 31 ~~F~~~l--~~~~~k~VlV~FyA~WC~pCk~~~P~l---~~la~~~~~~~g~~~~~~v~f~~VD~d~--~~~la~~y~V~ 103 (470)
T 3qcp_A 31 DDFSRVH--RVAPLCPWIVLFYNDGCGACRRYASTF---SKFAGGLKVEHGKDALQIATAAAVNCAS--EVDLCRKYDIN 103 (470)
T ss_dssp SCGGGTC--TTGGGSCEEEEEECTTCHHHHHHHHHH---HHHHHTSCCSSCSSGGGGCEEEEEETTT--CHHHHHHTTCC
T ss_pred HHHHHHH--HhCCCCeEEEEEECCCCHHHHHHHHHH---HHHHHHHhhhcccccCceEEEEEEECCC--CHHHHHHcCCC
Confidence 3455444 234578999999999999999997543 33333333 148899998775 36799999999
Q ss_pred CCCeEEEEeCCCCeeEEEecC------------CCChHHHHHHHHHHHhh
Q 021440 195 SIPAVLVIDPITGQKICSWCG------------MINPQPLGEMLLPFMDR 232 (312)
Q Consensus 195 ~~P~i~IIdprTGe~v~~~~G------------~~~~~~fl~~L~~fl~~ 232 (312)
.||++.|+++..+.....+.| .++.+++...+...+.+
T Consensus 104 ~~PTlilf~~gg~~~~~~y~G~r~~e~L~fI~k~l~~~eLe~~~e~Link 153 (470)
T 3qcp_A 104 FVPRLFFFYPRDSCRSNEECGTSSLEHVAFENSHLEVDELESEVRRLVNK 153 (470)
T ss_dssp SSCEEEEEEESSCCCTTSCCCCCCEEEEECSCTTCCHHHHHHHHHHHHHH
T ss_pred ccCeEEEEECCCceEEEEeeCCCCHHHHHHHHHhcCHHHHHHHHHHHhhh
Confidence 999999998643333323333 35667777776666644
No 189
>1oai_A Nuclear RNA export factor; nuclear transport, nuclear transport factor; 1.0A {Homo sapiens} SCOP: a.5.2.3
Probab=97.57 E-value=0.00011 Score=52.82 Aligned_cols=45 Identities=18% Similarity=0.326 Sum_probs=41.8
Q ss_pred CCchhhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhc
Q 021440 3 SESIDKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAV 48 (312)
Q Consensus 3 ~~s~~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~ 48 (312)
-+|..+.++|..|... ||-+.+-+..+|+.++||++.|+..|.+.
T Consensus 2 ~ls~~q~~mv~~~s~~-Tgmn~~~s~~cL~~~~Wd~~~A~~~F~~l 46 (59)
T 1oai_A 2 TLSPEQQEMLQAFSTQ-SGMNLEWSQKCLQDNNWDYTRSAQAFTHL 46 (59)
T ss_dssp CCCHHHHHHHHHHHHH-HCCCHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH-HCCCHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 3577899999999999 99999999999999999999999999874
No 190
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=97.54 E-value=0.00046 Score=60.08 Aligned_cols=92 Identities=11% Similarity=0.104 Sum_probs=65.7
Q ss_pred HHHhhhcCCCccc-cccccHHHHHHHHHHcCCeEEEEeec-------CCCcccchhhcccCCCHHHHHHhh-----ccEE
Q 021440 107 DILASLYRPPFHV-MFNGSFEKAKDAALAQDKWLLVNLQS-------TKEFSSLMLNRDTWGNEAVSQIIS-----VNFI 173 (312)
Q Consensus 107 ~~La~lfrPP~~l-~~~gsf~~A~~~Ak~~~KwLLVniq~-------~~~f~c~~lnRDvw~~~~V~~~i~-----~nFI 173 (312)
+.|..+-.+...| +-..+|++.+. ...+.++||.+.. .||.+|++|.-.+ +.|.+-.. .+.+
T Consensus 9 ~~l~~l~~~~~vi~lt~~nF~~~v~--~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~---e~lA~~~~~~~~~~~v~ 83 (178)
T 3ga4_A 9 DDILQLKDDTGVITVTADNYPLLSR--GVPGYFNILYITMRGTNSNGMSCQLCHDFEKTY---HAVADVIRSQAPQSLNL 83 (178)
T ss_dssp HHHHTTCCTTSEEECCTTTHHHHTT--CCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHH---HHHHHHHHHHCTTCCEE
T ss_pred HHHHHhhccCCCEECCHHHHHHHHc--ccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHH---HHHHHHhhhccCCCCEE
Confidence 4455555544444 34668987543 3457899999999 4999999995332 23333233 5688
Q ss_pred EEEeccCChhHHHHHHhcCCCCCCeEEEEeCC
Q 021440 174 FWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPI 205 (312)
Q Consensus 174 fwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdpr 205 (312)
|..+|+| ++..+++.|++.++|+|.++-+-
T Consensus 84 f~kvD~d--~~~~la~~~~I~siPtl~~F~~g 113 (178)
T 3ga4_A 84 FFTVDVN--EVPQLVKDLKLQNVPHLVVYPPA 113 (178)
T ss_dssp EEEEETT--TCHHHHHHTTCCSSCEEEEECCC
T ss_pred EEEEECc--cCHHHHHHcCCCCCCEEEEEcCC
Confidence 8888776 57889999999999999999873
No 191
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=97.52 E-value=0.00011 Score=76.19 Aligned_cols=117 Identities=9% Similarity=0.044 Sum_probs=82.5
Q ss_pred HHhhhcCCCccccccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHH
Q 021440 108 ILASLYRPPFHVMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKV 187 (312)
Q Consensus 108 ~La~lfrPP~~l~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~ 187 (312)
.+-.-+.||..+ ..+-+.........+|.+||+++++||.+|+.+...+ +.+.+-.+.++.|..++.+. ...+
T Consensus 649 ~fi~~~~~~~v~--~l~~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~---~~la~~~~~~~~~~~vd~~~--~~~~ 721 (780)
T 3apo_A 649 SWGLGFLPQASI--DLTPQTFNEKVLQGKTHWVVDFYAPWSGPSQNFAPEF---ELLARMIKGKVRAGKVDCQA--YPQT 721 (780)
T ss_dssp HHHHTTSCCCSE--EECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHH---HHHHHHHTTTCEEEEEETTT--CHHH
T ss_pred HHHhhhcccccc--cCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHH---HHHHHHhcCCceEEEEECCC--CHHH
Confidence 333444555422 2233333344456789999999999999999987554 44555555678888887654 4568
Q ss_pred HHhcCCCCCCeEEEEeCCCCeeEEEecC----CCChHHHHHHHHHHHhhC
Q 021440 188 CSFYNMDSIPAVLVIDPITGQKICSWCG----MINPQPLGEMLLPFMDRS 233 (312)
Q Consensus 188 ~~~Y~~~~~P~i~IIdprTGe~v~~~~G----~~~~~~fl~~L~~fl~~~ 233 (312)
+..|++..+|+++|+. .|+.+..+.| ..+.+++.+.|.+.+.+.
T Consensus 722 ~~~~~v~~~Pt~~~~~--~g~~~~~~~G~~~g~~~~~~l~~~l~~~l~~~ 769 (780)
T 3apo_A 722 CQKAGIKAYPSVKLYQ--YERAKKSIWEEQINSRDAKTIAALIYGKLETL 769 (780)
T ss_dssp HHHTTCCSSSEEEEEE--EETTTTEEEEEEECCCCHHHHHHHHHHHTTC-
T ss_pred HHhcCCCcCCEEEEEc--CCCccccccCcccCCcCHHHHHHHHHHHHHHh
Confidence 8999999999999993 4776655555 578999999998887654
No 192
>1z96_A DNA-damage, UBA-domain protein MUD1; ubiquitin, three-helix bundle, protein transport; 1.80A {Schizosaccharomyces pombe} SCOP: a.5.2.1
Probab=97.50 E-value=0.00014 Score=47.48 Aligned_cols=38 Identities=24% Similarity=0.369 Sum_probs=34.4
Q ss_pred hhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHH
Q 021440 7 DKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFF 46 (312)
Q Consensus 7 ~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff 46 (312)
+.++.|.+++++ |-+.+.|++.|..++||++.|++.+|
T Consensus 3 ~~~~~i~~L~~m--Gf~~~~a~~AL~~~~~n~e~A~~~L~ 40 (40)
T 1z96_A 3 GLNSKIAQLVSM--GFDPLEAAQALDAANGDLDVAASFLL 40 (40)
T ss_dssp CHHHHHHHHHHT--TCCHHHHHHHHHHTTTCHHHHHHHHC
T ss_pred hHHHHHHHHHHc--CCCHHHHHHHHHHcCCCHHHHHHHHC
Confidence 456799999999 89999999999999999999998764
No 193
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=97.50 E-value=0.00047 Score=61.92 Aligned_cols=87 Identities=6% Similarity=-0.009 Sum_probs=65.5
Q ss_pred cCCeEEEEeecCCCcccchhhcccCCCHHHHHHhh----ccEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCCCCeeE
Q 021440 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIIS----VNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKI 210 (312)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~----~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdprTGe~v 210 (312)
.++..+|+++++||..|+.+...+ ..+..... .++.+..++.+. ...++..|++.++|++.| .|+.+
T Consensus 137 ~~~~~vv~F~a~wC~~C~~~~p~l---~~la~~~~~~~~~~v~~~~vd~~~--~~~~~~~~~V~~vPt~~i----~G~~~ 207 (243)
T 2hls_A 137 KGRVHIETIITPSCPYCPYAVLLA---HMFAYEAWKQGNPVILSEAVEAYE--NPDIADKYGVMSVPSIAI----NGYLV 207 (243)
T ss_dssp CSCEEEEEEECSSCSSHHHHHHHH---HHHHHHHHHTTCCCEEEEEEETTT--CHHHHHHTTCCSSSEEEE----TTEEE
T ss_pred CCCcEEEEEECCCCCCcHHHHHHH---HHHHHHcccccCCcEEEEEEECcc--CHHHHHHcCCeeeCeEEE----CCEEE
Confidence 467889999999999999985432 12222221 468888876654 446788999999999988 47754
Q ss_pred EEecCCCChHHHHHHHHHHHhh
Q 021440 211 CSWCGMINPQPLGEMLLPFMDR 232 (312)
Q Consensus 211 ~~~~G~~~~~~fl~~L~~fl~~ 232 (312)
+.|..+.++|++.|.+.+..
T Consensus 208 --~~G~~~~~~l~~~l~~~~~~ 227 (243)
T 2hls_A 208 --FVGVPYEEDFLDYVKSAAEG 227 (243)
T ss_dssp --EESCCCHHHHHHHHHHHHTT
T ss_pred --EeCCCCHHHHHHHHHHHhhc
Confidence 88999999999999888765
No 194
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=96.64 E-value=1.5e-05 Score=63.94 Aligned_cols=75 Identities=19% Similarity=0.167 Sum_probs=53.6
Q ss_pred HcCC-eEEEEeecCCCcccchhhcccCCCHHHHHHh---hccEEEEEeccCChh-----------------------HHH
Q 021440 134 AQDK-WLLVNLQSTKEFSSLMLNRDTWGNEAVSQII---SVNFIFWQEYDDTSE-----------------------GWK 186 (312)
Q Consensus 134 ~~~K-wLLVniq~~~~f~c~~lnRDvw~~~~V~~~i---~~nFIfwq~~~ds~E-----------------------G~~ 186 (312)
-++| ++||++..+||.+|+.+...+ ..+.+-+ ..++.++.++.+... ...
T Consensus 23 ~~gk~~vll~F~a~wC~~C~~~~~~l---~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (143)
T 2lus_A 23 LKDKDIIGFYFSAHWCPPCRGFTPIL---ADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASN 99 (143)
Confidence 3567 999999999999999886554 2222223 235666666666432 236
Q ss_pred HHHhcCCCCCCeEEEEeCCCCeeEEE
Q 021440 187 VCSFYNMDSIPAVLVIDPITGQKICS 212 (312)
Q Consensus 187 ~~~~Y~~~~~P~i~IIdprTGe~v~~ 212 (312)
++..|++..+|++.|||+ .|+.+..
T Consensus 100 ~~~~~~v~~~P~~~lid~-~G~i~~~ 124 (143)
T 2lus_A 100 VTAKYGITGIPALVIVKK-DGTLISM 124 (143)
Confidence 778899999999999997 5887765
No 195
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=97.44 E-value=0.00019 Score=63.35 Aligned_cols=90 Identities=13% Similarity=0.072 Sum_probs=61.7
Q ss_pred cCCeEEEEeec-CCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhH--------------------------HHH
Q 021440 135 QDKWLLVNLQS-TKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEG--------------------------WKV 187 (312)
Q Consensus 135 ~~KwLLVniq~-~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG--------------------------~~~ 187 (312)
.+|++||++.. +||..|...-..+ ++...+|=..++.++.++.|+.+. ..+
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l--~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~ 145 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAF--SDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEI 145 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHH--HHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHH--HHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHH
Confidence 68999999995 9999999865332 111222323468888888887532 135
Q ss_pred HHhcCCC------CCCeEEEEeCCCCeeEEEecCCCC----hHHHHHHHH
Q 021440 188 CSFYNMD------SIPAVLVIDPITGQKICSWCGMIN----PQPLGEMLL 227 (312)
Q Consensus 188 ~~~Y~~~------~~P~i~IIdprTGe~v~~~~G~~~----~~~fl~~L~ 227 (312)
+..|.+. .+|++.|||+ .|+.+..+.|... .+++++.|.
T Consensus 146 ~~~ygv~~~~~g~~~P~~~lID~-~G~I~~~~~g~~~~~~~~~~il~~l~ 194 (222)
T 3ztl_A 146 SKAYGVFDEEDGNAFRGLFIIDP-NGILRQITINDKPVGRSVDETLRLLD 194 (222)
T ss_dssp HHHTTCBCTTTSSBCEEEEEECT-TSEEEEEEEECTTBCCCHHHHHHHHH
T ss_pred HHHcCCeecCCCCccceEEEECC-CCeEEEEEecCCCCCCCHHHHHHHHH
Confidence 5667776 7899999997 6999988877543 455555554
No 196
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=97.44 E-value=0.00044 Score=56.92 Aligned_cols=79 Identities=13% Similarity=0.286 Sum_probs=54.1
Q ss_pred cCCeEEEEeec-CCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHH-------------------HHHHhcCCC
Q 021440 135 QDKWLLVNLQS-TKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGW-------------------KVCSFYNMD 194 (312)
Q Consensus 135 ~~KwLLVniq~-~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~-------------------~~~~~Y~~~ 194 (312)
.+||++|++.. +||..|...-..+ .+...+|-..++.++.++.|+++.. .++..|.+.
T Consensus 34 ~gk~~vl~F~~~~~c~~C~~~~~~l--~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 111 (163)
T 3gkn_A 34 AGHWLVIYFYPKDSTPGATTEGLDF--NALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVI 111 (163)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHH--HHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCE
T ss_pred CCCcEEEEEeCCCCCCcHHHHHHHH--HHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCc
Confidence 57899999997 9999998764332 1222333344677888877765432 344556554
Q ss_pred C------------CCeEEEEeCCCCeeEEEecCC
Q 021440 195 S------------IPAVLVIDPITGQKICSWCGM 216 (312)
Q Consensus 195 ~------------~P~i~IIdprTGe~v~~~~G~ 216 (312)
. .|++.|||+ .|+.+..|.|.
T Consensus 112 ~~~~~~~~~~~~~~p~~~lid~-~G~i~~~~~~~ 144 (163)
T 3gkn_A 112 KEKNMYGKQVLGIERSTFLLSP-EGQVVQAWRKV 144 (163)
T ss_dssp EEEEETTEEEEEECCEEEEECT-TSCEEEEECSC
T ss_pred cccccccccccCcceEEEEECC-CCeEEEEEcCC
Confidence 3 899999997 69998888654
No 197
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=97.42 E-value=0.00058 Score=56.54 Aligned_cols=89 Identities=10% Similarity=0.022 Sum_probs=64.1
Q ss_pred cCCeEEEEeecCC-CcccchhhcccCCCHHHHHHhh--ccEEEEEeccCChh---------------------HHHHHHh
Q 021440 135 QDKWLLVNLQSTK-EFSSLMLNRDTWGNEAVSQIIS--VNFIFWQEYDDTSE---------------------GWKVCSF 190 (312)
Q Consensus 135 ~~KwLLVniq~~~-~f~c~~lnRDvw~~~~V~~~i~--~nFIfwq~~~ds~E---------------------G~~~~~~ 190 (312)
.+||++|++..+| |..|...-. .+.++.+ .++.++.++.|+++ ...+...
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~------~l~~l~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 116 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTR------RFNEEAAKLGDVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEA 116 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHH------HHHHHHHHHSSCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHH
T ss_pred CCCeEEEEEecCCCCCchHHHHH------HHHHHHHHcCCCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHH
Confidence 5799999999998 999987643 3333332 56777777776532 2356677
Q ss_pred cCCCC------CCeEEEEeCCCCeeEEEecCC-----CChHHHHHHHHHHH
Q 021440 191 YNMDS------IPAVLVIDPITGQKICSWCGM-----INPQPLGEMLLPFM 230 (312)
Q Consensus 191 Y~~~~------~P~i~IIdprTGe~v~~~~G~-----~~~~~fl~~L~~fl 230 (312)
|.+.. +|++.|||+ .|+.+..+.|. .+.+++++.|.+.+
T Consensus 117 ~~v~~~~~g~~~p~~~lid~-~G~i~~~~~g~~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 117 FGVYIKELRLLARSVFVLDE-NGKVVYAEYVSEATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp TTCBBTTTCSBCCEEEEECT-TSCEEEEEECSBTTSCCCSHHHHHHHHHHH
T ss_pred hCCccccCCceeeEEEEEcC-CCcEEEEEecCCcCCCCCHHHHHHHHHHhh
Confidence 77754 499999997 69998888653 24588888888765
No 198
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=97.42 E-value=0.0012 Score=58.51 Aligned_cols=35 Identities=11% Similarity=0.377 Sum_probs=29.6
Q ss_pred CeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021440 197 PAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (312)
Q Consensus 197 P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~ 232 (312)
|+..|||+ .|+.+.+|.|.++++++.+.|.+.|.+
T Consensus 178 pttfLID~-~G~vv~~~~g~~~~~~l~~~I~~ll~~ 212 (215)
T 2i3y_A 178 FEKFLVGP-DGIPVMRWSHRATVSSVKTDILAYLKQ 212 (215)
T ss_dssp TCEEEECT-TSCEEEEECTTSCHHHHHHHHHHHGGG
T ss_pred ceEEEECC-CCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 67899996 699999999988999888888887754
No 199
>1wj7_A Hypothetical protein (RSGI RUH-015); UBA domain, ubiquitin associated domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.5.2.1
Probab=97.36 E-value=0.00022 Score=56.86 Aligned_cols=42 Identities=19% Similarity=0.344 Sum_probs=39.1
Q ss_pred hhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcC
Q 021440 7 DKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVN 49 (312)
Q Consensus 7 ~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~~ 49 (312)
+.++.|...+++ ||.+++.|+..|..|||||+.||...|+..
T Consensus 38 d~eekVk~L~Em-tG~seeeAr~AL~~~ngDl~~AI~~Lleg~ 79 (104)
T 1wj7_A 38 DFEEKVKQLIDI-TGKNQDECVIALHDCNGDVNRAINVLLEGN 79 (104)
T ss_dssp HHHHHHHHHHHH-TCCCHHHHHHHHHHHTSCHHHHHHHHHTCS
T ss_pred cHHHHHHHHHHh-hCCCHHHHHHHHHHcCCCHHHHHHHHHhCC
Confidence 457899999999 999999999999999999999999999865
No 200
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=97.30 E-value=0.00058 Score=57.58 Aligned_cols=74 Identities=12% Similarity=0.007 Sum_probs=54.5
Q ss_pred cCCeEEEEeecCC-CcccchhhcccCCCHHHHHHhh-ccEEEEEeccCChhH--------------------HHHHHhcC
Q 021440 135 QDKWLLVNLQSTK-EFSSLMLNRDTWGNEAVSQIIS-VNFIFWQEYDDTSEG--------------------WKVCSFYN 192 (312)
Q Consensus 135 ~~KwLLVniq~~~-~f~c~~lnRDvw~~~~V~~~i~-~nFIfwq~~~ds~EG--------------------~~~~~~Y~ 192 (312)
.+||+||++..+| |..|...- +.+.++.+ .++.|+.++.|+++. ..+++.|.
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~------~~l~~l~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 116 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSV------RTFDERAAASGATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFGEDYG 116 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHH------HHHHHHHHHTTCEEEEEESSCHHHHTTCC------CEEEEECTTSSHHHHTT
T ss_pred CCCEEEEEEEeCCCCchHHHHH------HHHHHHHhhcCCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHHHHhC
Confidence 4799999999988 99998764 34444443 567777777775532 34667777
Q ss_pred CCCC---------CeEEEEeCCCCeeEEEecC
Q 021440 193 MDSI---------PAVLVIDPITGQKICSWCG 215 (312)
Q Consensus 193 ~~~~---------P~i~IIdprTGe~v~~~~G 215 (312)
+... |++.|||+ .|+.+..+.|
T Consensus 117 v~~~~~~~~g~~~p~~~lid~-~G~I~~~~~g 147 (175)
T 1xvq_A 117 VTIADGPMAGLLARAIVVIGA-DGNVAYTELV 147 (175)
T ss_dssp CBBCSSTTTTSBCSEEEEECT-TSBEEEEEEC
T ss_pred CcccccccCCcccceEEEECC-CCeEEEEEEC
Confidence 7555 99999997 6999988864
No 201
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=97.28 E-value=0.00062 Score=62.04 Aligned_cols=93 Identities=10% Similarity=0.013 Sum_probs=66.9
Q ss_pred cCCeE-EEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChh-------------------------HHHHH
Q 021440 135 QDKWL-LVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSE-------------------------GWKVC 188 (312)
Q Consensus 135 ~~KwL-LVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~E-------------------------G~~~~ 188 (312)
.+||+ |+++..+||+.|...-..+ +....+|-+.++.++.++.|+.+ ...++
T Consensus 32 ~GK~vVL~~fpa~~CpvC~tEl~~l--~~l~~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia 109 (249)
T 3a2v_A 32 QGKWFVLFSHPADFTPVCTTEFVSF--ARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVA 109 (249)
T ss_dssp TTCEEEEECCSCTTCHHHHHHHHHH--HHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSHHH
T ss_pred CCCEEEEEEEcCCCCcChHHHHHHH--HHHHHHHHhCCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCchHHH
Confidence 67985 5678899999998764332 12233444557889999888754 23467
Q ss_pred HhcCCC-------CCCeEEEEeCCCCeeEEEecCCC----ChHHHHHHHHHHH
Q 021440 189 SFYNMD-------SIPAVLVIDPITGQKICSWCGMI----NPQPLGEMLLPFM 230 (312)
Q Consensus 189 ~~Y~~~-------~~P~i~IIdprTGe~v~~~~G~~----~~~~fl~~L~~fl 230 (312)
..|.+. .+|.+.|||| .|..+..+.|.. +.++++..|..+.
T Consensus 110 ~~ygv~~~~~g~~~~p~~fIID~-dG~I~~~~~~~~~~gr~~~Ellr~I~alq 161 (249)
T 3a2v_A 110 RRLGLLHAESATHTVRGVFIVDA-RGVIRTMLYYPMELGRLVDEILRIVKALK 161 (249)
T ss_dssp HHHTCCCTTCSSSCCEEEEEECT-TSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHhCCccccCCCcccceEEEECC-CCeEEEEEecCCcccchhHHHHHHHHHHH
Confidence 788875 8999999998 598887776643 6788888887765
No 202
>2jp7_A MRNA export factor MEX67; solution MEX67, UBA, translation; NMR {Saccharomyces cerevisiae} PDB: 2khh_A
Probab=97.27 E-value=0.00027 Score=50.52 Aligned_cols=44 Identities=9% Similarity=0.033 Sum_probs=41.3
Q ss_pred CchhhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhc
Q 021440 4 ESIDKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAV 48 (312)
Q Consensus 4 ~s~~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~ 48 (312)
++..+.++|.+|+.. ||-+.+-+..+|+.++||++.|+..|-+.
T Consensus 2 l~~~q~~mv~~~s~~-T~Mn~e~S~~cL~~n~Wd~~~A~~~F~~~ 45 (57)
T 2jp7_A 2 LNPVQLELLNKLHLE-TKLNAEYTFMLAEQSNWNYEVAIKGFQSS 45 (57)
T ss_dssp CCHHHHHHHHHHHHH-HCSCHHHHHHHHHHTTTCSHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHH-HCCCHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 466789999999999 99999999999999999999999999885
No 203
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=97.26 E-value=0.0012 Score=55.59 Aligned_cols=96 Identities=11% Similarity=0.054 Sum_probs=64.4
Q ss_pred HcCCeEEEEee-cCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHH-HH------------------HHhcCC
Q 021440 134 AQDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGW-KV------------------CSFYNM 193 (312)
Q Consensus 134 ~~~KwLLVniq-~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~-~~------------------~~~Y~~ 193 (312)
.++||++|+++ .+||..|..--..+- +...+|-+.++.++.++.|+++.. ++ ++.|.+
T Consensus 31 ~~Gk~vvl~f~~~~~cp~C~~e~~~l~--~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv 108 (164)
T 4gqc_A 31 KRGRPAVLIFFPAAFSPVCTKELCTFR--DKMAQLEKANAEVLAISVDSPWCLKKFKDENRLAFNLLSDYNREVIKLYNV 108 (164)
T ss_dssp HTSSCEEEEECSCTTCCEECSSCEESC--CCGGGGGGSSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTC
T ss_pred cCCCEEEEEEeCCCCCCCcccchhhhh--hhHHHhhccCceEEEecCCCHHHHHHHHHhcCcccceeecCchHHHHHcCC
Confidence 46899999988 899999976443332 223345556778888887776533 33 344443
Q ss_pred ----------CCCCeEEEEeCCCCeeEEEecC-----CCChHHHHHHHHHHHhh
Q 021440 194 ----------DSIPAVLVIDPITGQKICSWCG-----MINPQPLGEMLLPFMDR 232 (312)
Q Consensus 194 ----------~~~P~i~IIdprTGe~v~~~~G-----~~~~~~fl~~L~~fl~~ 232 (312)
..+|++.|||+ .|...+.|.+ ..+.+++++.|.+...+
T Consensus 109 ~~~~~~~~~~~~~p~tflID~-~G~I~~~~~~~~~~~~~~~~eil~~l~~l~~e 161 (164)
T 4gqc_A 109 YHEDLKGLKMVAKRAVFIVKP-DGTVAYKWVTDNPLNEPDYDEVVREANKIAGE 161 (164)
T ss_dssp EEEEETTEEEEECCEEEEECT-TSBEEEEEECSCTTCCCCHHHHHHHHHHHHHH
T ss_pred cccccccCcCCeeeEEEEECC-CCEEEEEEEeCCCCCCCCHHHHHHHHHHHhcc
Confidence 13578899997 6988877643 24678898888876543
No 204
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=97.24 E-value=0.0014 Score=59.78 Aligned_cols=97 Identities=14% Similarity=0.152 Sum_probs=70.9
Q ss_pred ccccHHHHHHHHHHcCCeEEEEee--cCCCcccchhhcccCCCHHHHHHhh---ccEEEEEeccCC---hhHHHHHHhcC
Q 021440 121 FNGSFEKAKDAALAQDKWLLVNLQ--STKEFSSLMLNRDTWGNEAVSQIIS---VNFIFWQEYDDT---SEGWKVCSFYN 192 (312)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq--~~~~f~c~~lnRDvw~~~~V~~~i~---~nFIfwq~~~ds---~EG~~~~~~Y~ 192 (312)
-..+|++++ ..++.+||+|+ .+||. |. -+| +.+.+-+. .+++|..+|++. .+...++..|+
T Consensus 22 t~~nF~~vi----~~~~~vlV~Fy~~ApWCg----l~-P~~--e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~ 90 (248)
T 2c0g_A 22 DELSFEKTV----ERFPYSVVKFDIASPYGE----KH-EAF--TAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYK 90 (248)
T ss_dssp CTTTHHHHH----TTSSEEEEEEEESSCCSH----HH-HHH--HHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTT
T ss_pred CHHHHHHHH----hcCCCEEEEEECCCCCCc----cH-HHH--HHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhC
Confidence 456788754 56789999999 99997 32 122 23333332 369999999876 34678999999
Q ss_pred CC--CCCeEEEEeCCCCe--eEEEe--cCCCChHHHHHHHHHHHh
Q 021440 193 MD--SIPAVLVIDPITGQ--KICSW--CGMINPQPLGEMLLPFMD 231 (312)
Q Consensus 193 ~~--~~P~i~IIdprTGe--~v~~~--~G~~~~~~fl~~L~~fl~ 231 (312)
+. .||+|.++- |+ ....+ .|..+.+.+.+.|.+.+.
T Consensus 91 V~~~~~PTl~~F~---G~~~~~~~y~~~G~~~~~~L~~fi~~~~~ 132 (248)
T 2c0g_A 91 VDDKNFPSIFLFK---GNADEYVQLPSHVDVTLDNLKAFVSANTP 132 (248)
T ss_dssp CCTTSCCEEEEES---SSSSSEEECCTTSCCCHHHHHHHHHHHSS
T ss_pred CCcCCCCeEEEEe---CCcCcceeecccCCCCHHHHHHHHHHhhc
Confidence 99 999999995 66 25567 898898887777776654
No 205
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=97.24 E-value=0.001 Score=60.26 Aligned_cols=96 Identities=14% Similarity=0.203 Sum_probs=68.8
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeec--CCCcccchhhcccCCCHHHHHHhh--ccEEEEEeccCC---hhHHHHHHhcCC
Q 021440 121 FNGSFEKAKDAALAQDKWLLVNLQS--TKEFSSLMLNRDTWGNEAVSQIIS--VNFIFWQEYDDT---SEGWKVCSFYNM 193 (312)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~--~~~f~c~~lnRDvw~~~~V~~~i~--~nFIfwq~~~ds---~EG~~~~~~Y~~ 193 (312)
-..+|++.+ ..++.+||+|+. +||. |. .+| +.+.+-+. .+++|..+|++. .+...++..|++
T Consensus 11 t~~nF~~~i----~~~~~vlV~FyA~~pWCg----l~-P~~--e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V 79 (240)
T 2qc7_A 11 DTVTFYKVI----PKSKFVLVKFDTQYPYGE----KQ-DEF--KRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKL 79 (240)
T ss_dssp CTTHHHHHG----GGCSEEEEEECCSSCCSH----HH-HHH--HHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTC
T ss_pred CHHHHHHHH----cCCCCEEEEEeCCCCCCc----ch-HHH--HHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCC
Confidence 345677755 467899999999 9997 32 122 23333343 369999999764 456789999999
Q ss_pred C--CCCeEEEEeCCCCe--eEEEecCCCChHHHHHHHHHH
Q 021440 194 D--SIPAVLVIDPITGQ--KICSWCGMINPQPLGEMLLPF 229 (312)
Q Consensus 194 ~--~~P~i~IIdprTGe--~v~~~~G~~~~~~fl~~L~~f 229 (312)
. .||+|.++-. |+ .+..+.|..+.+.|++.|.+.
T Consensus 80 ~~~~~PTl~~f~~--G~~~~~~~y~G~~~~~~L~~fi~~~ 117 (240)
T 2qc7_A 80 DKESYPVFYLFRD--GDFENPVPYTGAVKVGAIQRWLKGQ 117 (240)
T ss_dssp CGGGCSEEEEEET--TCSSCCEECCSCSCHHHHHHHHHHT
T ss_pred CCCCCCEEEEEeC--CCcCcceeecCCCCHHHHHHHHHHh
Confidence 9 9999999963 66 356788988887766655544
No 206
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=97.16 E-value=0.0034 Score=55.12 Aligned_cols=35 Identities=20% Similarity=0.382 Sum_probs=29.6
Q ss_pred CeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021440 197 PAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (312)
Q Consensus 197 P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~ 232 (312)
|+..|||+ .|+.+.+|.|.++++++...|...|.+
T Consensus 160 ~ttflID~-~G~i~~~~~g~~~~~~l~~~I~~ll~~ 194 (207)
T 2r37_A 160 FEKFLVGP-DGIPIMRWHHRTTVSNVKMDILSYMRR 194 (207)
T ss_dssp TCEEEECT-TSCEEEEECTTSCHHHHHHHHHHHHHH
T ss_pred ceEEEECC-CCcEEEEECCCCCHHHHHHHHHHHHhh
Confidence 67899996 699999999988999888888887754
No 207
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=97.16 E-value=0.0022 Score=55.82 Aligned_cols=91 Identities=9% Similarity=0.048 Sum_probs=62.0
Q ss_pred HcCCeEEEEee-----cCCCcccchhhcccCCCHHH-HHHh-hccEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCCC
Q 021440 134 AQDKWLLVNLQ-----STKEFSSLMLNRDTWGNEAV-SQII-SVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPIT 206 (312)
Q Consensus 134 ~~~KwLLVniq-----~~~~f~c~~lnRDvw~~~~V-~~~i-~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdprT 206 (312)
+..+.++|.+. .+||..|+.|-..+ ..+ .++. ..++.|..++.+ +...++..|++..||++.++. .
T Consensus 18 ~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~---~~~a~~~~~~~~v~~~~vd~~--~~~~l~~~~~v~~~Ptl~~~~--~ 90 (229)
T 2ywm_A 18 EFKEPVSIKLFSQAIGCESCQTAEELLKET---VEVIGEAVGQDKIKLDIYSPF--THKEETEKYGVDRVPTIVIEG--D 90 (229)
T ss_dssp HCCSCEEEEEECCCTTCGGGGHHHHHHHHH---HHHHHHHHCTTTEEEEEECTT--TCHHHHHHTTCCBSSEEEEES--S
T ss_pred hccCCeEEEEEccCCCCcccHHHHHHHHHH---HHHHhccCCCCceEEEEecCc--ccHHHHHHcCCCcCcEEEEEC--C
Confidence 44455555555 45566666664332 122 2222 467888887655 467899999999999999996 3
Q ss_pred CeeEEEecCCCChHHHHHHHHHHHh
Q 021440 207 GQKICSWCGMINPQPLGEMLLPFMD 231 (312)
Q Consensus 207 Ge~v~~~~G~~~~~~fl~~L~~fl~ 231 (312)
|.....+.|..+.+++...+...+.
T Consensus 91 ~~~~~~~~G~~~~~~l~~~~~~~~~ 115 (229)
T 2ywm_A 91 KDYGIRYIGLPAGLEFTTLINGIFH 115 (229)
T ss_dssp SCCCEEEESCCCTTHHHHHHHHHHH
T ss_pred CcccceecCCccHHHHHHHHHHHHh
Confidence 6666778898888888777777665
No 208
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=97.15 E-value=0.0007 Score=52.68 Aligned_cols=76 Identities=9% Similarity=0.077 Sum_probs=50.2
Q ss_pred HHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChh---HHHHHHhcCCCCCCeEEEEeC
Q 021440 128 AKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSE---GWKVCSFYNMDSIPAVLVIDP 204 (312)
Q Consensus 128 A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~E---G~~~~~~Y~~~~~P~i~IIdp 204 (312)
.+....+ ++.|+| +..+||.+|+.+.+ +.+-+...|.+..++.+... ...++..|++..+|++ +++
T Consensus 12 ~~~~~~~-~~~vv~-f~a~~C~~C~~~~~-------~l~~~~~~~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~-~~~- 80 (116)
T 2e7p_A 12 KAKELAS-SAPVVV-FSKTYCGYCNRVKQ-------LLTQVGASYKVVELDELSDGSQLQSALAHWTGRGTVPNV-FIG- 80 (116)
T ss_dssp HHHHHHT-SSSEEE-EECTTCHHHHHHHH-------HHHHHTCCCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE-EET-
T ss_pred HHHHHHc-CCCEEE-EECCCChhHHHHHH-------HHHHcCCCeEEEEccCCCChHHHHHHHHHHhCCCCcCEE-EEC-
Confidence 3333443 456666 89999999998854 22333456777777655431 2458889999999999 554
Q ss_pred CCCeeEEEecCC
Q 021440 205 ITGQKICSWCGM 216 (312)
Q Consensus 205 rTGe~v~~~~G~ 216 (312)
|+.+..+.|.
T Consensus 81 --g~~v~~~~~~ 90 (116)
T 2e7p_A 81 --GKQIGGCDTV 90 (116)
T ss_dssp --TEEEECHHHH
T ss_pred --CEEECChHHH
Confidence 7777655543
No 209
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=97.12 E-value=0.0026 Score=59.41 Aligned_cols=113 Identities=11% Similarity=0.104 Sum_probs=79.7
Q ss_pred cCCCccccccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcC
Q 021440 113 YRPPFHVMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYN 192 (312)
Q Consensus 113 frPP~~l~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~ 192 (312)
-.|....+-..++.... ....+.++|++.++||.+|+.+...+ ..+.+-++..+.|..++.+..+..++++.|+
T Consensus 115 ~~p~v~~~~~~~~~~~~---~~~~~~~~v~F~~~~~~~~~~~~~~~---~~~A~~~~~~i~f~~vd~~~~~~~~~~~~fg 188 (361)
T 3uem_A 115 QLPLVIEFTEQTAPKIF---GGEIKTHILLFLPKSVSDYDGKLSNF---KTAAESFKGKILFIFIDSDHTDNQRILEFFG 188 (361)
T ss_dssp SSCSEEECSTTTHHHHH---SCSCCEEEEEECCSSSSSHHHHHHHH---HHHHGGGTTTCEEEEECTTSGGGHHHHHHTT
T ss_pred CCCcceecCcccHHHHh---cCCCCcEEEEEEeCCchhHHHHHHHH---HHHHHHccCceEEEEecCChHHHHHHHHHcC
Confidence 34555555566666443 23456778899999999999885322 2333344556888888888777889999999
Q ss_pred CCC--CCeEEEEeCCCCeeEEEec---CCCChHHHHHHHHHHHhhC
Q 021440 193 MDS--IPAVLVIDPITGQKICSWC---GMINPQPLGEMLLPFMDRS 233 (312)
Q Consensus 193 ~~~--~P~i~IIdprTGe~v~~~~---G~~~~~~fl~~L~~fl~~~ 233 (312)
+.. +|+++|++. |..+..+. |..+++.+.+-+..+++..
T Consensus 189 i~~~~~P~~~~~~~--~~~~~ky~~~~~~~~~~~l~~fi~~~l~g~ 232 (361)
T 3uem_A 189 LKKEECPAVRLITL--EEEMTKYKPESEELTAERITEFCHRFLEGK 232 (361)
T ss_dssp CCTTTCSEEEEEEC--C--CCEECCSSCCCCHHHHHHHHHHHHTTC
T ss_pred CCccCCccEEEEEc--CCcccccCCCccccCHHHHHHHHHHHhcCC
Confidence 977 999999996 23333343 6789999888888888643
No 210
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=97.09 E-value=0.002 Score=53.57 Aligned_cols=90 Identities=14% Similarity=0.118 Sum_probs=54.3
Q ss_pred cCCeEEEEee-cCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHH-HHH------------------HhcCCC
Q 021440 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGW-KVC------------------SFYNMD 194 (312)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~-~~~------------------~~Y~~~ 194 (312)
++|+++|++. .+||..|..--..+ .....++-..++.++.++.|+++.. +++ +.|.+.
T Consensus 29 ~Gk~vvl~f~~~~~c~~C~~e~~~l--~~~~~~~~~~~~~~v~vs~d~~~~~~~~~~~~~~~~p~l~D~~~~v~~~ygv~ 106 (157)
T 4g2e_A 29 KGKVVVLAFYPAAFTQVCTKEMCTF--RDSMAKFNQVNAVVLGISVDPPFSNKAFKEHNKLNFTILSDYNREVVKKYNVA 106 (157)
T ss_dssp TTSCEEEEECSCTTCCC------CC--SCGGGGGGGCSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCE
T ss_pred CCCeEEEEecCCCCCCccccchhhc--ccccccccccCceEeeecccchhHHHHHHHHcCCcEEEEEcCCcHHHHHcCCc
Confidence 5799999998 89999997654433 2233445556788888888876543 344 344431
Q ss_pred -----------CCCeEEEEeCCCCeeEEEecCC-----CChHHHHHHHH
Q 021440 195 -----------SIPAVLVIDPITGQKICSWCGM-----INPQPLGEMLL 227 (312)
Q Consensus 195 -----------~~P~i~IIdprTGe~v~~~~G~-----~~~~~fl~~L~ 227 (312)
..|++.|||+ .|...+.|.|. .+.+++++.|+
T Consensus 107 ~~~~~~~~~~~~~p~tflID~-~G~I~~~~~~~~~~~~~~~~eil~~l~ 154 (157)
T 4g2e_A 107 WEFPALPGYVLAKRAVFVIDK-EGKVRYKWVSDDPTKEPPYDEIEKVVK 154 (157)
T ss_dssp EECTTSTTCEEECEEEEEECT-TSBEEEEEEESSTTCCCCHHHHHHHHH
T ss_pred cccccCCCcceeeeeEEEECC-CCEEEEEEECCCCCCCCCHHHHHHHHH
Confidence 2467788997 58877776442 34566655554
No 211
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=97.06 E-value=0.0025 Score=56.47 Aligned_cols=93 Identities=13% Similarity=0.074 Sum_probs=61.1
Q ss_pred cCCeEEEEee-cCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHH--------------------------HH
Q 021440 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGW--------------------------KV 187 (312)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~--------------------------~~ 187 (312)
.+||+||++. .+||..|..--..+ ++...+|-..++.++.++.|+.+.. .+
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l--~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~ 132 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEF--NKHIKDFENKNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDI 132 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHH--HHTHHHHHHTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHH--HHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHH
Confidence 5799999999 99999998653322 1111222234566666666664322 23
Q ss_pred HHhcCC-----CCCCeEEEEeCCCCeeEEEecCC----CChHHHHHHHHHHH
Q 021440 188 CSFYNM-----DSIPAVLVIDPITGQKICSWCGM----INPQPLGEMLLPFM 230 (312)
Q Consensus 188 ~~~Y~~-----~~~P~i~IIdprTGe~v~~~~G~----~~~~~fl~~L~~fl 230 (312)
+..|.+ ..+|++.|||+ .|+.+..+.|. .+++++++.|....
T Consensus 133 ~~~ygv~~~~g~~~P~~~lID~-~G~I~~~~~g~~~~~~~~~ell~~l~~L~ 183 (221)
T 2c0d_A 133 SKNYNVLYDNSFALRGLFIIDK-NGCVRHQTVNDLPIGRNVQEVLRTIDSII 183 (221)
T ss_dssp HHHTTCEETTTEECEEEEEECT-TSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHHcCCcccCCCccceEEEECC-CCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 344555 25799999997 69988887663 35778888777765
No 212
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=97.00 E-value=0.0029 Score=53.56 Aligned_cols=92 Identities=14% Similarity=0.235 Sum_probs=59.0
Q ss_pred cCCeEEEEee-cCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHH-HH------------------HHhcCCC
Q 021440 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGW-KV------------------CSFYNMD 194 (312)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~-~~------------------~~~Y~~~ 194 (312)
.+||++|++. ..||..|..--..+ .....+|-..++.++.+..|+++.. ++ +..|.+.
T Consensus 50 ~Gk~vvl~f~~~~~c~~C~~el~~l--~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~gv~ 127 (179)
T 3ixr_A 50 TNQWLVLYFYPKDNTPGSSTEGLEF--NLLLPQFEQINATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILCKAFDVI 127 (179)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHH--HHHHHHHHTTTEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTCHHHHHTTCE
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHH--HHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCceEEEECCchHHHHHcCCc
Confidence 5789999998 88999997654332 1222333345688888888875432 23 3444441
Q ss_pred ------------CCCeEEEEeCCCCeeEEEecCCC---ChHHHHHHHHHH
Q 021440 195 ------------SIPAVLVIDPITGQKICSWCGMI---NPQPLGEMLLPF 229 (312)
Q Consensus 195 ------------~~P~i~IIdprTGe~v~~~~G~~---~~~~fl~~L~~f 229 (312)
..|++.|||+ .|+.+..|.|.. ..+++++.|...
T Consensus 128 ~~~~~~g~~~~~~~p~~~lID~-~G~I~~~~~~~~~~~~~~~il~~l~~l 176 (179)
T 3ixr_A 128 KEKTMYGRQVIGIERSTFLIGP-THRIVEAWRQVKVPGHAEEVLNKLKAH 176 (179)
T ss_dssp EEECCC--CEEEECCEEEEECT-TSBEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred ccccccCcccCCcceEEEEECC-CCEEEEEEcCCCCCCCHHHHHHHHHHH
Confidence 2588999997 699988886642 345566666554
No 213
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=97.00 E-value=0.0033 Score=51.64 Aligned_cols=93 Identities=5% Similarity=0.063 Sum_probs=58.6
Q ss_pred cCCeEEEEee-cCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChh-------------------HHHHHHhcCCC
Q 021440 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSE-------------------GWKVCSFYNMD 194 (312)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~E-------------------G~~~~~~Y~~~ 194 (312)
++||++|++. .+||..|...-..+ ++...+|-..+ .++.++.|+++ ...++..|.+.
T Consensus 34 k~~~vvl~f~~~~~c~~C~~~~~~l--~~~~~~~~~~~-~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~ 110 (159)
T 2a4v_A 34 NNRVVVFFVYPRASTPGSTRQASGF--RDNYQELKEYA-AVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLGAK 110 (159)
T ss_dssp HCSEEEEEECSSSSSHHHHHHHHHH--HHHHHHHTTTC-EEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHHTCB
T ss_pred CCCeEEEEEcCCCCCCCHHHHHHHH--HHHHHHHHhCC-cEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHHhCCc
Confidence 3569999986 88999997543221 11112222233 44455555433 22456677777
Q ss_pred CCC------eEEEEeCCCCeeEEEecCCCC---hHHHHHHHHHHHhh
Q 021440 195 SIP------AVLVIDPITGQKICSWCGMIN---PQPLGEMLLPFMDR 232 (312)
Q Consensus 195 ~~P------~i~IIdprTGe~v~~~~G~~~---~~~fl~~L~~fl~~ 232 (312)
..| +..|| + .|+.+..+.|... .+.+++.|.+.++.
T Consensus 111 ~~p~~g~~~~~~li-~-~G~i~~~~~g~~~~~~~~~~~~~l~~~l~~ 155 (159)
T 2a4v_A 111 KTPLSGSIRSHFIF-V-DGKLKFKRVKISPEVSVNDAKKEVLEVAEK 155 (159)
T ss_dssp SSSSSCBCCEEEEE-E-TTEEEEEEESCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCccceEEEE-c-CCEEEEEEccCCccccHHHHHHHHHHHHHH
Confidence 777 77778 6 6999988888643 46778888877765
No 214
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=96.99 E-value=0.0034 Score=52.65 Aligned_cols=100 Identities=12% Similarity=0.048 Sum_probs=61.4
Q ss_pred cCCeEEEEeecCCCc-ccchhhcccC------------------------CCHHHHHHhhcc---EEEEEec--cCChhH
Q 021440 135 QDKWLLVNLQSTKEF-SSLMLNRDTW------------------------GNEAVSQIISVN---FIFWQEY--DDTSEG 184 (312)
Q Consensus 135 ~~KwLLVniq~~~~f-~c~~lnRDvw------------------------~~~~V~~~i~~n---FIfwq~~--~ds~EG 184 (312)
.+||+||++..+||. .|...-..+= +-+.+++|++++ |.-|.+- .+..+.
T Consensus 27 ~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~ 106 (170)
T 3me7_A 27 KGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDL 106 (170)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESSHHHH
T ss_pred CCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHH
Confidence 489999999999996 5865322210 002233333321 2222211 112234
Q ss_pred HHHHHhcCC---------CCCCeEEEEeCCCCeeEEEecCC-CChHHHHHHHHHHHhhCCC
Q 021440 185 WKVCSFYNM---------DSIPAVLVIDPITGQKICSWCGM-INPQPLGEMLLPFMDRSPR 235 (312)
Q Consensus 185 ~~~~~~Y~~---------~~~P~i~IIdprTGe~v~~~~G~-~~~~~fl~~L~~fl~~~~~ 235 (312)
.++++.|.+ ...|++.|||| .|+.+..|.|. .++++++..|.+.+.....
T Consensus 107 ~~~~~~~g~~~~~~~~~~~~~~~~~lID~-~G~i~~~~~g~~~~~~~i~~~l~~~~~~~~~ 166 (170)
T 3me7_A 107 FKLLDAIDFRFMTAGNDFIHPNVVVVLSP-ELQIKDYIYGVNYNYLEFVNALRLARGEGHH 166 (170)
T ss_dssp HHHHHHTTCCCEEETTEEECCCEEEEECT-TSBEEEEEESSSCCHHHHHHHHHHHTTCSCT
T ss_pred HHHHHHCCeEEecCCCccccCceEEEECC-CCeEEEEEeCCCCCHHHHHHHHHHhhccccc
Confidence 456666543 34588999998 69998888886 6899999988887765443
No 215
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=96.99 E-value=0.002 Score=56.38 Aligned_cols=93 Identities=12% Similarity=0.071 Sum_probs=60.5
Q ss_pred cCCeEEEEee-cCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHH--------------------------HH
Q 021440 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGW--------------------------KV 187 (312)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~--------------------------~~ 187 (312)
.+||+||++. .+||..|..--..+ ++...+|-..++.++.++.|+++.. .+
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~~~l--~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~ 124 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEIIAF--GDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQI 124 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHH--HHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHH--HHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHH
Confidence 5799999999 99999998543221 0111222234677777777665421 23
Q ss_pred HHhcCCC------CCCeEEEEeCCCCeeEEEecCCC----ChHHHHHHHHHHH
Q 021440 188 CSFYNMD------SIPAVLVIDPITGQKICSWCGMI----NPQPLGEMLLPFM 230 (312)
Q Consensus 188 ~~~Y~~~------~~P~i~IIdprTGe~v~~~~G~~----~~~~fl~~L~~fl 230 (312)
+..|.+. ..|++.|||+ .|+.+..+.|.. +.+++++.|....
T Consensus 125 ~~~ygv~~~~~g~~~p~~~lID~-~G~I~~~~~g~~~~~~~~~ell~~l~~l~ 176 (211)
T 2pn8_A 125 SKDYGVYLEDSGHTLRGLFIIDD-KGILRQITLNDLPVGRSVDETLRLVQAFQ 176 (211)
T ss_dssp HHHTTCEETTTTEECEEEEEECT-TSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHcCCcccCCCcccceEEEECC-CCEEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 3444442 4899999997 699888876643 5678888777765
No 216
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=96.97 E-value=0.0059 Score=51.45 Aligned_cols=95 Identities=9% Similarity=0.080 Sum_probs=57.9
Q ss_pred HHHcCCeEEEEeecCCCc-ccchhhcccCCCHHHHHHhh---ccEEEEEecc----CChhHH-HHHHhcC----------
Q 021440 132 ALAQDKWLLVNLQSTKEF-SSLMLNRDTWGNEAVSQIIS---VNFIFWQEYD----DTSEGW-KVCSFYN---------- 192 (312)
Q Consensus 132 Ak~~~KwLLVniq~~~~f-~c~~lnRDvw~~~~V~~~i~---~nFIfwq~~~----ds~EG~-~~~~~Y~---------- 192 (312)
+.=++||+|||+..+||. .|......+ ..+.+.++ .++.++.+++ |+++.. +|+..|.
T Consensus 28 ~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l---~~l~~~~~~~~~~v~~v~isvDp~~Dtp~~l~~y~~~~~~~~~~~~~lt 104 (170)
T 4hde_A 28 KDLKGKVWVADFMFTNCQTVCPPMTANM---AKLQKMAKEEKLDVQFVSFSVDPDLDKPENLKAFIQKFTEDTSNWNLLT 104 (170)
T ss_dssp HHHTTSCEEEEEECTTCSSSHHHHHHHH---HHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTTCSCCTTEEEEB
T ss_pred HHhCCCEEEEEEECCCCCCcccHHHHHH---HHHHHhhhcccccceeEeeecCcccccHHHHHHHHHHcCCCCCCceecC
Confidence 334689999999999996 686543332 23334332 2344444443 344322 2333222
Q ss_pred ----------------C----------CCCCeEEEEeCCCCeeEEEecCC--CChHHHHHHHHHHH
Q 021440 193 ----------------M----------DSIPAVLVIDPITGQKICSWCGM--INPQPLGEMLLPFM 230 (312)
Q Consensus 193 ----------------~----------~~~P~i~IIdprTGe~v~~~~G~--~~~~~fl~~L~~fl 230 (312)
. ..-|++.|||| .|+.+..|.|. .+.+++++.|+..+
T Consensus 105 g~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~-~G~i~~~~~g~~~~~~~~l~~~ik~Ll 169 (170)
T 4hde_A 105 GYSLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQ-NGKVMKKYSGISNTPYEDIIRDMKRLA 169 (170)
T ss_dssp CSCHHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECT-TSCEEEEEESSSSCCHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHhcccccccCCCCceEEeeeEEEEEcC-CCeEEEEECCCCCCCHHHHHHHHHHHh
Confidence 1 12378899997 69998889885 35688888887755
No 217
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=96.97 E-value=0.0045 Score=51.55 Aligned_cols=87 Identities=13% Similarity=-0.025 Sum_probs=52.2
Q ss_pred cCCeEEEEee-cCCCcccchhhcccCCCHHHHHHhh--ccEEEEEeccCChh---------------------HHHHHHh
Q 021440 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIIS--VNFIFWQEYDDTSE---------------------GWKVCSF 190 (312)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~~~~V~~~i~--~nFIfwq~~~ds~E---------------------G~~~~~~ 190 (312)
.+||++|++. ..||..|...-. .+.++.+ .++.++.++.|+++ ...+ +.
T Consensus 46 ~gk~vvl~f~~~~~C~~C~~~~~------~l~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~-~~ 118 (171)
T 2yzh_A 46 KDVVQVIITVPSLDTPVCETETK------KFNEIMAGMEGVDVTVVSMDLPFAQKRFCESFNIQNVTVASDFRYRDM-EK 118 (171)
T ss_dssp CSSEEEEEECSCTTSHHHHHHHH------HHHHHTTTCTTEEEEEEESSCHHHHHHHHHHTTCCSSEEEECTTTCGG-GG
T ss_pred CCCeEEEEEECCCCCCchHHHHH------HHHHHHHHcCCceEEEEeCCCHHHHHHHHHHcCCCCeEEeecCccCcH-HH
Confidence 4689999998 789999975421 1222211 23333333333322 1223 45
Q ss_pred cCCC---------CCCeEEEEeCCCCeeEEEecC-----CCChHHHHHHHHHH
Q 021440 191 YNMD---------SIPAVLVIDPITGQKICSWCG-----MINPQPLGEMLLPF 229 (312)
Q Consensus 191 Y~~~---------~~P~i~IIdprTGe~v~~~~G-----~~~~~~fl~~L~~f 229 (312)
|.+. ..|++.|||+ .|+.+..+.| ..+++++++.|++.
T Consensus 119 ~gv~~~~~~~~g~~~p~~~liD~-~G~i~~~~~~~~~~~~~~~~~ll~~l~~l 170 (171)
T 2yzh_A 119 YGVLIGEGALKGILARAVFIIDK-EGKVAYVQLVPEITEEPNYDEVVNKVKEL 170 (171)
T ss_dssp GTCBBCSSTTTTSBCCEEEEECT-TSBEEEEEECSBTTSCCCCHHHHHHHHHC
T ss_pred hCCEecccccCCceeeEEEEEcC-CCeEEEEEeCCCcCCCCCHHHHHHHHHhh
Confidence 5542 2599999997 5888888754 24678888877653
No 218
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=96.93 E-value=0.0012 Score=51.19 Aligned_cols=81 Identities=15% Similarity=0.017 Sum_probs=55.0
Q ss_pred CCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCCCCeeEEEecC
Q 021440 136 DKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCG 215 (312)
Q Consensus 136 ~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G 215 (312)
.+..+|.+..+||..|+.+.+-+ . -+..++-|..++++.++...++..|. ...|+| +++ |+.+ .+ |
T Consensus 15 ~~~~v~~f~~~~C~~C~~~~~~L-~------~l~~~i~~~~vdi~~~~~~el~~~~g-~~vP~l-~~~---g~~~-~~-~ 80 (100)
T 1wjk_A 15 ALPVLTLFTKAPCPLCDEAKEVL-Q------PYKDRFILQEVDITLPENSTWYERYK-FDIPVF-HLN---GQFL-MM-H 80 (100)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHT-S------TTSSSSEEEEEETTSSTTHHHHHHSS-SSCSEE-EES---SSEE-EE-S
T ss_pred CCCEEEEEeCCCCcchHHHHHHH-H------HhhhCCeEEEEECCCcchHHHHHHHC-CCCCEE-EEC---CEEE-Ee-c
Confidence 45668888999999999985432 1 11234667778888666788999999 999976 444 6654 33 3
Q ss_pred CCChHHHHHHHHHHH
Q 021440 216 MINPQPLGEMLLPFM 230 (312)
Q Consensus 216 ~~~~~~fl~~L~~fl 230 (312)
..+++.+.+.|..++
T Consensus 81 g~~~~~l~~~l~~~~ 95 (100)
T 1wjk_A 81 RVNTSKLEKQLRKLS 95 (100)
T ss_dssp SCCHHHHHHHHHSSS
T ss_pred CCCHHHHHHHHHHHH
Confidence 467776655555433
No 219
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=96.93 E-value=0.0049 Score=52.55 Aligned_cols=93 Identities=14% Similarity=0.058 Sum_probs=61.2
Q ss_pred cCCeEEEEeec-CCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhH-HHHHHhc---------------------
Q 021440 135 QDKWLLVNLQS-TKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEG-WKVCSFY--------------------- 191 (312)
Q Consensus 135 ~~KwLLVniq~-~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG-~~~~~~Y--------------------- 191 (312)
.+||+||++.. +||..|..--..+ +....+|-..++.++.++.|+++. .+|+..+
T Consensus 29 ~Gk~vvl~F~~~~~Cp~C~~e~~~l--~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ 106 (186)
T 1n8j_A 29 EGRWSVFFFYPADFTFVSPTELGDV--ADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRN 106 (186)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHH--HHHHHHHHHTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHH
T ss_pred CCCeEEEEEECCCCCCccHHHHHHH--HHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHH
Confidence 57999999984 8999998643222 112222333467777777776543 2344433
Q ss_pred -CCC------CCCeEEEEeCCCCeeEEEecCCC----ChHHHHHHHHHHH
Q 021440 192 -NMD------SIPAVLVIDPITGQKICSWCGMI----NPQPLGEMLLPFM 230 (312)
Q Consensus 192 -~~~------~~P~i~IIdprTGe~v~~~~G~~----~~~~fl~~L~~fl 230 (312)
.+. ..|++.|||+ .|+.+..+.|.. +.+++++.|....
T Consensus 107 ygv~~~~~g~~~p~~~lID~-~G~i~~~~~~~~~~~~~~~~l~~~l~~l~ 155 (186)
T 1n8j_A 107 FDNMREDEGLADRATFVVDP-QGIIQAIEVTAEGIGRDASDLLRKIKAAQ 155 (186)
T ss_dssp TTCEETTTTEECEEEEEECT-TSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred hCCccCCCCceeeEEEEECC-CCeEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 332 2599999997 699888887653 5778887777665
No 220
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=96.90 E-value=0.014 Score=51.36 Aligned_cols=108 Identities=9% Similarity=0.051 Sum_probs=73.1
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCC--CCCe
Q 021440 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMD--SIPA 198 (312)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~--~~P~ 198 (312)
-.-+.+.+...-....+++++.+.+.+|..|..+-. .| ..|.+-.+.++.|.-++.+..+..++++.|.+. .+|.
T Consensus 116 ~e~t~~n~~~~~~~~~~~~~l~f~~~~~~~~~~~~~-~~--~~vAk~~k~~i~F~~vd~~~~~~~~~l~~fgl~~~~~P~ 192 (227)
T 4f9z_D 116 TEYNPVTVIGLFNSVIQIHLLLIMNKASPEYEENMH-RY--QKAAKLFQGKILFILVDSGMKENGKVISFFKLKESQLPA 192 (227)
T ss_dssp EECCHHHHHHHHHSSCCEEEEEEECTTSTTHHHHHH-HH--HHHHHHTTTTCEEEEEETTSGGGHHHHHHTTCCGGGCSE
T ss_pred eecCcccHHHHhccCCceEEEEEEcCCcchHHHHHH-HH--HHHHHHhhCCEEEEEeCCccHhHHHHHHHcCCCcccCCE
Confidence 344555555555555677777777878878876542 22 335555566788887888766666788999997 8999
Q ss_pred EEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021440 199 VLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (312)
Q Consensus 199 i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~ 231 (312)
|+|++...+.+...-.|.++++.+.+-|..|++
T Consensus 193 ~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~~~ 225 (227)
T 4f9z_D 193 LAIYQTLDDEWDTLPTAEVSVEHVQNFCDGFLS 225 (227)
T ss_dssp EEEEESSSCCEEEETTCCCCHHHHHHHHHHHHT
T ss_pred EEEEECCCCccccCCcCCCCHHHHHHHHHHHhC
Confidence 999997544332222366888887777777765
No 221
>1wji_A Tudor domain containing protein 3; UBA domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=96.82 E-value=0.0039 Score=45.23 Aligned_cols=41 Identities=20% Similarity=0.304 Sum_probs=37.9
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Q 021440 8 KESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNE 50 (312)
Q Consensus 8 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~~~ 50 (312)
..+.|.+.+++ |-+.+.|++-|.+++||++.|++..|++..
T Consensus 9 ~~~~I~~L~~M--GF~~~~a~~AL~~~~~nve~A~e~L~~~~~ 49 (63)
T 1wji_A 9 DEKALKHITEM--GFSKEASRQALMDNGNNLEAALNVLLTSNK 49 (63)
T ss_dssp CHHHHHHHHTT--TCCHHHHHHHHHHTTSCHHHHHHHHHHHSS
T ss_pred CHHHHHHHHHc--CCCHHHHHHHHHHhCCCHHHHHHHHHHCCC
Confidence 57889999999 899999999999999999999999998764
No 222
>4gew_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; 2.35A {Caenorhabditis elegans} PDB: 4f1i_A
Probab=96.80 E-value=0.0006 Score=64.90 Aligned_cols=41 Identities=24% Similarity=0.473 Sum_probs=37.9
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcC
Q 021440 8 KESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVN 49 (312)
Q Consensus 8 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~~ 49 (312)
.+++..+|.+| |++|+..|..||+.++||||.|++.||+..
T Consensus 45 ~~~~~~~f~~~-~~~~~~~~~~~l~~~~w~~~~~~~~~~~~~ 85 (362)
T 4gew_A 45 DEQKLHEFAII-TATDEAFAQSILQDVDWDLKKALDVFYGSE 85 (362)
T ss_dssp HHHHHHHHHHH-HTCCHHHHHHHTTSSSSCHHHHHHHHHHCG
T ss_pred hHHHHHHHHHH-hCCcHHHHHHHHhhcCchHHHHHHHHcCCc
Confidence 45689999999 999999999999999999999999999653
No 223
>1dv0_A DNA repair protein HHR23A; helical bundle, DNA binding protein; HET: DNA; NMR {Homo sapiens} SCOP: a.5.2.1 PDB: 1f4i_A
Probab=96.78 E-value=0.00081 Score=46.06 Aligned_cols=42 Identities=14% Similarity=0.138 Sum_probs=38.2
Q ss_pred hhhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcC
Q 021440 6 IDKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVN 49 (312)
Q Consensus 6 ~~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~~ 49 (312)
.+..+.|.+.+++ |-+...|++-|.+|+||++.|++..|++.
T Consensus 2 ~~e~eaI~rL~~m--GF~~~~a~~Al~a~~~n~e~A~~~Lf~~~ 43 (47)
T 1dv0_A 2 SQEKEAIERLKAL--GFPESLVIQAYFACEKNENLAANFLLSQN 43 (47)
T ss_dssp -CCHHHHTTTTTT--TCCHHHHHHHHTTTTSCHHHHHHHTTSCC
T ss_pred cchHHHHHHHHHc--CCCHHHHHHHHHHcCCCHHHHHHHHHhCc
Confidence 4577899999999 99999999999999999999999999864
No 224
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=96.75 E-value=0.0029 Score=48.31 Aligned_cols=75 Identities=13% Similarity=0.054 Sum_probs=49.9
Q ss_pred EEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCCh
Q 021440 140 LVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINP 219 (312)
Q Consensus 140 LVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~ 219 (312)
+|.+..+||.+|+++.+ +.+-+...+ |..+|++. ...++..|.+. .|+|.+ ..|+.+. |..++
T Consensus 3 vv~f~a~~C~~C~~~~~-------~L~~~~~~~-~~~vdid~--~~~l~~~~g~~-vPtl~~---~~G~~v~---g~~~~ 65 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVE-------ALAQARAGA-FFSVFIDD--DAALESAYGLR-VPVLRD---PMGRELD---WPFDA 65 (87)
T ss_dssp EEEEECSSCHHHHHHHH-------HHHHTTCCC-EEEEECTT--CHHHHHHHTTT-CSEEEC---TTCCEEE---SCCCH
T ss_pred EEEEECCCCchHHHHHH-------HHHHHHHhh-eEEEECCC--CHHHHHHhCCC-cCeEEE---ECCEEEe---CCCCH
Confidence 67788999999999843 222233332 34566654 34578889987 999987 3487763 77888
Q ss_pred HHHHHHHHHHHh
Q 021440 220 QPLGEMLLPFMD 231 (312)
Q Consensus 220 ~~fl~~L~~fl~ 231 (312)
+.+.+.|...++
T Consensus 66 ~~L~~~l~~~~~ 77 (87)
T 1ttz_A 66 PRLRAWLDAAPH 77 (87)
T ss_dssp HHHHHHHHTCC-
T ss_pred HHHHHHHHHHHH
Confidence 876666655443
No 225
>1vg5_A RSGI RUH-014, rhomboid family protein; UBA domain, cDNA, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: a.5.2.1
Probab=96.72 E-value=0.0024 Score=47.81 Aligned_cols=42 Identities=17% Similarity=0.232 Sum_probs=38.2
Q ss_pred hhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Q 021440 7 DKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNE 50 (312)
Q Consensus 7 ~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~~~ 50 (312)
..++.|.+.+++ |-+.+.|++-|.+++||++.|++..|++.+
T Consensus 28 ~~ee~I~~L~eM--GF~r~~a~~AL~~~~~nve~Ave~Ll~~~~ 69 (73)
T 1vg5_A 28 ASEEQIQKLVAM--GFDRTQVEVALAAADDDLTVAVEILMSQSG 69 (73)
T ss_dssp CCHHHHHHHHTT--TCCHHHHHHHHHHHTSCHHHHHHHHHTCSC
T ss_pred ccHHHHHHHHHc--CCCHHHHHHHHHHhCCCHHHHHHHHHHCCC
Confidence 457899999999 799999999999999999999999998643
No 226
>2dah_A Ubiquilin-3; UBA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=96.71 E-value=0.0028 Score=44.65 Aligned_cols=42 Identities=12% Similarity=0.057 Sum_probs=37.1
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Q 021440 8 KESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNE 50 (312)
Q Consensus 8 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~~~ 50 (312)
-++.|.+.+++ +=.+...+++.|.+++||++.||...|...+
T Consensus 9 ~~~~l~~L~~M-GF~d~~~n~~AL~~~~Gdv~~Ave~L~~~~~ 50 (54)
T 2dah_A 9 FQVQLEQLRSM-GFLNREANLQALIATGGDVDAAVEKLRQSSG 50 (54)
T ss_dssp SHHHHHHHHHH-TCCCHHHHHHHHHHHTSCHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHc-CCCcHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 36789999999 6667788899999999999999999998765
No 227
>2g3q_A Protein YBL047C; endocytosis, solution structure, UBA domain, endocytosis/signaling protein complex; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1
Probab=96.70 E-value=0.0029 Score=42.10 Aligned_cols=39 Identities=18% Similarity=0.352 Sum_probs=35.5
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhc
Q 021440 8 KESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAV 48 (312)
Q Consensus 8 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~ 48 (312)
..+.|.+.+++ |-+.+.|++-|..++||++.|++..|++
T Consensus 4 ~e~~i~~L~~M--GF~~~~a~~AL~~~~~n~e~A~~~L~~~ 42 (43)
T 2g3q_A 4 KSLAVEELSGM--GFTEEEAHNALEKCNWDLEAATNFLLDS 42 (43)
T ss_dssp HHHHHHHHHTT--TSCHHHHHHHHHHHTSCHHHHHHHHHTC
T ss_pred CHHHHHHHHHc--CCCHHHHHHHHHHhCcCHHHHHHHHHcC
Confidence 45789999999 8999999999999999999999988864
No 228
>2knz_A Ubiquilin-4; cytoplasm, endoplasmic reticulum, nucleus, phosphoprotein, protein binding; NMR {Mus musculus}
Probab=96.69 E-value=0.0032 Score=44.07 Aligned_cols=41 Identities=12% Similarity=0.112 Sum_probs=36.6
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcC
Q 021440 8 KESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVN 49 (312)
Q Consensus 8 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~~ 49 (312)
-+++|.+.+++ +-.+.+.|++.|.+++||++.||+..|++.
T Consensus 11 ~~~~l~~L~~M-GF~~~~~~~~AL~~t~gnve~Ave~L~~~~ 51 (53)
T 2knz_A 11 FQQQLEQLNSM-GFINREANLQALIATGGDINAAIERLLGSQ 51 (53)
T ss_dssp HHHHHHHHHTT-TCCCHHHHHHHHHHHTSCHHHHHHHHHHCC
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHHHhCCCHHHHHHHHHHcC
Confidence 46789999999 555999999999999999999999999864
No 229
>1ify_A HHR23A, UV excision repair protein RAD23 homolog A; ubiquitin associated domain, UBA domain, ubiquitin proteosome pathway, DNA binding protein; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=96.69 E-value=0.0022 Score=44.21 Aligned_cols=41 Identities=12% Similarity=0.210 Sum_probs=37.2
Q ss_pred hhhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhc
Q 021440 6 IDKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAV 48 (312)
Q Consensus 6 ~~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~ 48 (312)
...++.|.+.+++ |-+.+.|+.-|.+++||++.|++..|++
T Consensus 6 ~~~~~~i~~L~~M--GF~~~~a~~AL~~~~~n~e~A~e~L~~g 46 (49)
T 1ify_A 6 SEYETMLTEIMSM--GYERERVVAALRASYNNPHRAVEYLLTG 46 (49)
T ss_dssp HHHHHHHHHHHHT--TCCHHHHHHHHHTTTSCSHHHHHHHHHC
T ss_pred ccCHHHHHHHHHc--CCCHHHHHHHHHHhCCCHHHHHHHHHhC
Confidence 3467899999999 7899999999999999999999998874
No 230
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=96.67 E-value=0.003 Score=56.66 Aligned_cols=92 Identities=12% Similarity=0.091 Sum_probs=59.2
Q ss_pred cCCeEEEEeec-CCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHH--------------------------HH
Q 021440 135 QDKWLLVNLQS-TKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGW--------------------------KV 187 (312)
Q Consensus 135 ~~KwLLVniq~-~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~--------------------------~~ 187 (312)
.+||+||++.. .||+.|..--..+ .....+|-..++.++.++.|+.+.. .+
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l--~~l~~~~~~~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v 153 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAF--SDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQI 153 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHH--HHHHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHH
T ss_pred CCCEEEEEEECCCCCCchHHHHHHH--HHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHH
Confidence 57999999998 9999998643221 1112223334677888877765432 23
Q ss_pred HHhcCCC------CCCeEEEEeCCCCeeEEEecCCC----ChHHHHHHHHHH
Q 021440 188 CSFYNMD------SIPAVLVIDPITGQKICSWCGMI----NPQPLGEMLLPF 229 (312)
Q Consensus 188 ~~~Y~~~------~~P~i~IIdprTGe~v~~~~G~~----~~~~fl~~L~~f 229 (312)
+..|.+. .+|.+.|||+ .|+.+..+.|.. ..+++++.|...
T Consensus 154 ~~~ygv~~~~~g~~~p~~flID~-~G~I~~~~~~~~~~~~~~~eil~~l~~l 204 (240)
T 3qpm_A 154 SKDYGVYLEDQGHTLRGLFIIDE-KGVLRQITMNDLPVGRSVDETLRLVQAF 204 (240)
T ss_dssp HHHTTCEETTTTEECEEEEEECT-TSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHHhCCccccCCCccceEEEEcC-CCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 4445553 5799999997 699887766532 456666666543
No 231
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=96.61 E-value=0.0059 Score=53.52 Aligned_cols=86 Identities=14% Similarity=0.183 Sum_probs=60.9
Q ss_pred HcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc--cEEEEEecc--------------------------------
Q 021440 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYD-------------------------------- 179 (312)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~--nFIfwq~~~-------------------------------- 179 (312)
...|..+|.+.++||..|+.+... +.++.+. .+++..+..
T Consensus 84 ~~~k~~vv~F~d~~Cp~C~~~~~~------l~~l~~~~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~ 157 (216)
T 1eej_A 84 PQEKHVITVFTDITCGYCHKLHEQ------MADYNALGITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKS 157 (216)
T ss_dssp TTCCEEEEEEECTTCHHHHHHHTT------HHHHHHTTEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCC
T ss_pred CCCCEEEEEEECCCCHHHHHHHHH------HHHHHhCCcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCC
Confidence 457999999999999999999765 4555543 344433321
Q ss_pred --------CChhHHHHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021440 180 --------DTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (312)
Q Consensus 180 --------ds~EG~~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~ 231 (312)
.-.+..++++.|.+..+|+++|.| |. .+.|+.++++|.+.|...+.
T Consensus 158 ~~~~~~~~~v~~~~~l~~~~gV~gtPt~v~~d---G~---~~~G~~~~~~l~~~l~~~~~ 211 (216)
T 1eej_A 158 VAPASCDVDIADHYALGVQLGVSGTPAVVLSN---GT---LVPGYQPPKEMKEFLDEHQK 211 (216)
T ss_dssp CCCCCCSCCHHHHHHHHHHHTCCSSSEEECTT---SC---EEESCCCHHHHHHHHHHHHH
T ss_pred CChhHHHHHHHHHHHHHHHcCCCccCEEEEcC---Ce---EecCCCCHHHHHHHHHHhhh
Confidence 112345677899999999996545 54 35799999988888877654
No 232
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=96.60 E-value=0.0031 Score=57.29 Aligned_cols=91 Identities=11% Similarity=0.032 Sum_probs=58.3
Q ss_pred cCCeEEEEee-cCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHH--------------------------HH
Q 021440 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGW--------------------------KV 187 (312)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~--------------------------~~ 187 (312)
.+||+||++. ..||+.|..--..+ .....+|-..++.++.++.|+.+.. .+
T Consensus 90 kGK~vvL~F~~a~~cp~C~~el~~l--~~l~~~~~~~gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~v 167 (254)
T 3tjj_A 90 RGKYLVFFFYPLDFTFVCPTEIIAF--GDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQI 167 (254)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHH--HHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHH--HHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHHH
Confidence 5799999999 88999998643221 1122333335677777777765431 33
Q ss_pred HHhcCCC------CCCeEEEEeCCCCeeEEEecCC----CChHHHHHHHHH
Q 021440 188 CSFYNMD------SIPAVLVIDPITGQKICSWCGM----INPQPLGEMLLP 228 (312)
Q Consensus 188 ~~~Y~~~------~~P~i~IIdprTGe~v~~~~G~----~~~~~fl~~L~~ 228 (312)
+..|.+. .+|.+.|||+ .|..+..+.+. ...+++++.|..
T Consensus 168 a~~ygv~~~~~g~~~p~tflID~-~G~I~~~~~~~~~~~~~~~eil~~L~a 217 (254)
T 3tjj_A 168 SKDYGVYLEDSGHTLRGLFIIDD-KGILRQITLNDLPVGRSVDETLRLVQA 217 (254)
T ss_dssp HHHHTCEETTTTEECEEEEEECT-TSBEEEEEEECTTCCCCHHHHHHHHHH
T ss_pred HHHcCCccccCCCccceEEEECC-CCeEEEEEecCCCCCCCHHHHHHHHHh
Confidence 4445542 4799999997 69888776653 245666666544
No 233
>2bwb_A Ubiquitin-like protein DSK2; UBA, signaling protein; 2.3A {Saccharomyces cerevisiae} SCOP: a.5.2.1 PDB: 2bwe_A
Probab=96.55 E-value=0.0038 Score=42.50 Aligned_cols=39 Identities=8% Similarity=0.020 Sum_probs=34.9
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHh
Q 021440 8 KESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFA 47 (312)
Q Consensus 8 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~ 47 (312)
-++.|.+.+++ +-.+.+.+++.|.+++||++.||...|+
T Consensus 7 ~~~~i~~L~~M-GF~d~~~~~~AL~~~~gnv~~Ave~L~~ 45 (46)
T 2bwb_A 7 YEHQLRQLNDM-GFFDFDRNVAALRRSGGSVQGALDSLLN 45 (46)
T ss_dssp THHHHHHHHHT-TCCCHHHHHHHHHHHTTCHHHHHHHHHC
T ss_pred HHHHHHHHHHc-CCCcHHHHHHHHHHhCCCHHHHHHHHHc
Confidence 46789999999 6678899999999999999999998885
No 234
>1veg_A NEDD8 ultimate buster-1; ubiquitin associated domain, UBA domain, three helix bundle, structural genomics; NMR {Mus musculus} SCOP: a.5.2.1
Probab=96.52 E-value=0.0035 Score=48.07 Aligned_cols=41 Identities=15% Similarity=0.112 Sum_probs=38.1
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Q 021440 8 KESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNE 50 (312)
Q Consensus 8 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~~~ 50 (312)
.+++|.+.+++ |-+.+.|++.|.+++||++.|++..|.+.+
T Consensus 29 ~ee~I~~Lv~M--GF~~~~A~~AL~~t~gdve~A~e~L~sh~~ 69 (83)
T 1veg_A 29 SQESINQLVYM--GFDTVVAEAALRVFGGNVQLAAQTLAHHGG 69 (83)
T ss_dssp CHHHHHHHHHH--SCCHHHHHHHHHHTTTCHHHHHHHHHHHTS
T ss_pred CHHHHHHHHHc--CCCHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 46899999999 899999999999999999999999999765
No 235
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=96.42 E-value=0.0066 Score=50.33 Aligned_cols=86 Identities=13% Similarity=-0.052 Sum_probs=50.9
Q ss_pred cCCeEEEEee-cCCCcccchhhcccCCCHHHHHHhh-ccEEEEEeccCChhH---------------------HHHHHhc
Q 021440 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIIS-VNFIFWQEYDDTSEG---------------------WKVCSFY 191 (312)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~~~~V~~~i~-~nFIfwq~~~ds~EG---------------------~~~~~~Y 191 (312)
.+||++|++. +.||..|..-- +.+.++.+ .++.++.++.|+++. ..++..|
T Consensus 45 ~Gk~vvl~f~~~~~c~~C~~~~------~~l~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~ 118 (166)
T 3p7x_A 45 AGKKKLISVVPSIDTGVCDQQT------RKFNSDASKEEGIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFGENY 118 (166)
T ss_dssp TTSCEEEEECSCTTSHHHHHHH------HHHHHHSCTTTSEEEEEESSCHHHHHHHHHHHTCSSCEEEECTTTCHHHHHH
T ss_pred CCCcEEEEEECCCCCCccHHHH------HHHHHHhhcCCCEEEEEECCCHHHHHHHHHHcCCCceEEccCCchhHHHHHh
Confidence 4688888888 67888886431 22222222 234444444443321 2455556
Q ss_pred CCCC------CCeEEEEeCCCCeeEEEecCC-----CChHHHHHHHH
Q 021440 192 NMDS------IPAVLVIDPITGQKICSWCGM-----INPQPLGEMLL 227 (312)
Q Consensus 192 ~~~~------~P~i~IIdprTGe~v~~~~G~-----~~~~~fl~~L~ 227 (312)
.+.. .|++.|||+ .|+.+..+.+. .+.+++++.|+
T Consensus 119 gv~~~~~g~~~p~~~liD~-~G~i~~~~~~~~~~~~~~~~~il~~l~ 164 (166)
T 3p7x_A 119 GVVMEELRLLARAVFVLDA-DNKVVYKEIVSEGTDFPDFDAALAAYK 164 (166)
T ss_dssp TCEETTTTEECCEEEEECT-TCBEEEEEECSBTTSCCCHHHHHHHHH
T ss_pred CCccccCCceeeEEEEECC-CCeEEEEEEcCCcccCCCHHHHHHHHh
Confidence 6532 799999997 69888775432 34577776665
No 236
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=96.32 E-value=0.028 Score=46.73 Aligned_cols=85 Identities=7% Similarity=0.049 Sum_probs=62.5
Q ss_pred HcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc----cEEEEEeccCC----------------------------
Q 021440 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV----NFIFWQEYDDT---------------------------- 181 (312)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~----nFIfwq~~~ds---------------------------- 181 (312)
...|..+|.+.+.+|..|..+.. .+.+++++ .|++..+....
T Consensus 20 ~~a~v~i~~f~d~~Cp~C~~~~~------~l~~l~~~~~~v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~ 93 (175)
T 3gyk_A 20 PEGDVTVVEFFDYNCPYCRRAMA------EVQGLVDADPNVRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMG 93 (175)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHH------HHHHHHHHCTTEEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHT
T ss_pred CCCCEEEEEEECCCCccHHHHHH------HHHHHHHhCCCEEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHh
Confidence 46799999999999999999974 45666653 46666554321
Q ss_pred -------------------------------------hhHHHHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHH
Q 021440 182 -------------------------------------SEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGE 224 (312)
Q Consensus 182 -------------------------------------~EG~~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~ 224 (312)
....+++..|.+...|+++| .|+ .+.|..+.+.|.+
T Consensus 94 ~~~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~i----~g~---~~~G~~~~~~l~~ 166 (175)
T 3gyk_A 94 MSGKANETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGTPSFVV----EDA---LVPGFVEQSQLQD 166 (175)
T ss_dssp CSSCCSHHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSSSEEEE----TTE---EECSCCCHHHHHH
T ss_pred cCCCCCHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCccCCEEEE----CCE---EeeCCCCHHHHHH
Confidence 12234667888999999986 354 4579999999998
Q ss_pred HHHHHHh
Q 021440 225 MLLPFMD 231 (312)
Q Consensus 225 ~L~~fl~ 231 (312)
.|.+.++
T Consensus 167 ~i~~~l~ 173 (175)
T 3gyk_A 167 AVDRARK 173 (175)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8888775
No 237
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=96.26 E-value=0.0092 Score=53.35 Aligned_cols=94 Identities=6% Similarity=-0.034 Sum_probs=62.2
Q ss_pred HHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc---cEEEEEeccC-----------------------------
Q 021440 133 LAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV---NFIFWQEYDD----------------------------- 180 (312)
Q Consensus 133 k~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~---nFIfwq~~~d----------------------------- 180 (312)
....|..++.+.+.+|..|+.|... +.+++++ .|++..+..-
T Consensus 94 ~~~ak~~v~~F~D~~Cp~C~~~~~~------l~~~~~~g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~ 167 (241)
T 1v58_A 94 KKDAPVIVYVFADPFCPYCKQFWQQ------ARPWVDSGKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGG 167 (241)
T ss_dssp CTTCSEEEEEEECTTCHHHHHHHHH------HHHHHHTTSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTT
T ss_pred CCCCCeEEEEEECCCChhHHHHHHH------HHHHHhCCcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhc
Confidence 3456888999999999999999754 4566654 2333333210
Q ss_pred ----------C-------hhHHHHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhCC
Q 021440 181 ----------T-------SEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRSP 234 (312)
Q Consensus 181 ----------s-------~EG~~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~~~ 234 (312)
+ .+..++++.|.+...|+++|.+. +|+. .++.|+.++++|.+.|.+.+.++-
T Consensus 168 ~~~l~~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~-~G~~-~~~~G~~~~~~L~~~l~~~~~~~~ 236 (241)
T 1v58_A 168 KLKLNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSK-ENTL-QQAVGLPDQKTLNIIMGNKLQHHH 236 (241)
T ss_dssp CCCCCCCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEET-TTEE-EEEESSCCHHHHHHHTTC------
T ss_pred cCCCCccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECC-CCCE-EEecCCCCHHHHHHHHHHHHHhhc
Confidence 0 12235667889999999999885 5753 567899999988887777665543
No 238
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=96.26 E-value=0.036 Score=51.99 Aligned_cols=123 Identities=15% Similarity=0.098 Sum_probs=75.4
Q ss_pred cCCeEEEEee-cCCCcccchhhcccCCCHHHHHHhh---ccEEEEEeccCChhHH-------------------HHHHhc
Q 021440 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIIS---VNFIFWQEYDDTSEGW-------------------KVCSFY 191 (312)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~~~~V~~~i~---~nFIfwq~~~ds~EG~-------------------~~~~~Y 191 (312)
.+||+++|++ ..+++.|.. ++.+|-+ +++.++.++.|+.+.. ++++.|
T Consensus 23 ~Gk~vvl~F~p~~~tp~C~~---------e~~~~~~~~~~~~~v~gis~D~~~~~~~f~~~~~l~fp~l~D~~~~v~~~y 93 (322)
T 4eo3_A 23 YGKYTILFFFPKAGTSGSTR---------EAVEFSRENFEKAQVVGISRDSVEALKRFKEKNDLKVTLLSDPEGILHEFF 93 (322)
T ss_dssp TTSEEEEEECSSTTSHHHHH---------HHHHHHHSCCTTEEEEEEESCCHHHHHHHHHHHTCCSEEEECTTCHHHHHT
T ss_pred CCCeEEEEEECCCCCCCCHH---------HHHHHHHHhhCCCEEEEEeCCCHHHHHHHHHhhCCceEEEEcCchHHHHhc
Confidence 5799999998 345666642 2233322 3567777877765433 355666
Q ss_pred CC----CCCCeEEEEeCCCCeeEEEecCCC---ChHHHHHHHHHHHh-hCCCCcCCccccc-c-CCCCCCCCChHHHHHH
Q 021440 192 NM----DSIPAVLVIDPITGQKICSWCGMI---NPQPLGEMLLPFMD-RSPRKCATIIIER-Q-RASSTTPQRNIKDCCS 261 (312)
Q Consensus 192 ~~----~~~P~i~IIdprTGe~v~~~~G~~---~~~~fl~~L~~fl~-~~~~~~~~~~~k~-~-~~~~~~~~~~~eql~~ 261 (312)
.+ ..+|+..|||+ .|...++|.+.. .++++++.|+.+.+ +.++.. ...+| . |.-+.. .-..|+|+.
T Consensus 94 gv~~~~~~~r~tfiId~-~G~i~~~~~~v~~~~h~~~~l~~~~~~~~~~~~~~~--~I~~RRSiR~F~~~-~V~~e~l~~ 169 (322)
T 4eo3_A 94 NVLENGKTVRSTFLIDR-WGFVRKEWRRVKVEGHVQEVKEALDRLIEEDLSLNK--HIEWRRARRALKKD-RVPREELEL 169 (322)
T ss_dssp TCEETTEECCEEEEECT-TSBEEEEEESCCSTTHHHHHHHHHHHHHHHHTSCCH--HHHHCCCCCCBCCC-CCCHHHHHH
T ss_pred CCCCCCcCccEEEEECC-CCEEEEEEeCCCccccHHHHHHHHhhhchhhhHHHH--HHHhhhccCCcCcc-ccCHHHHHH
Confidence 66 35789999997 699988898742 36888888888874 344431 12222 1 222111 123477777
Q ss_pred HHHHhhHhh
Q 021440 262 ALAASMETI 270 (312)
Q Consensus 262 Ai~~Sl~~~ 270 (312)
.|++...+-
T Consensus 170 ileaA~~AP 178 (322)
T 4eo3_A 170 LIKAAHLAP 178 (322)
T ss_dssp HHHHHHTSC
T ss_pred HHHHHHhCc
Confidence 777776543
No 239
>1wr1_B Ubiquitin-like protein DSK2; UBA domain, UBA-ubiquitin complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1
Probab=96.23 E-value=0.007 Score=43.24 Aligned_cols=39 Identities=8% Similarity=0.010 Sum_probs=35.4
Q ss_pred HHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhc
Q 021440 9 ESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAV 48 (312)
Q Consensus 9 ~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~ 48 (312)
+++|.+.+++ +-.+.+.+++.|.+++||++.||...|.+
T Consensus 18 ~~qi~~L~~M-GF~d~~~~~~AL~~~~gnve~Ave~L~~~ 56 (58)
T 1wr1_B 18 EHQLRQLNDM-GFFDFDRNVAALRRSGGSVQGALDSLLNG 56 (58)
T ss_dssp HHHHHHHHHH-TCCCHHHHHHHHHHHTSCHHHHHHHHHHT
T ss_pred HHHHHHHHHc-CCCcHHHHHHHHHHhCCCHHHHHHHHHhC
Confidence 5689999999 65789999999999999999999999875
No 240
>2jy5_A Ubiquilin-1; UBA, alternative splicing, cytoplasm, nucleus, phosphoprotein, proteasome, signaling protein; NMR {Homo sapiens} PDB: 2jy6_B
Probab=96.21 E-value=0.0074 Score=42.02 Aligned_cols=40 Identities=13% Similarity=0.111 Sum_probs=35.4
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhc
Q 021440 8 KESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAV 48 (312)
Q Consensus 8 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~ 48 (312)
-.++|.+.+++ +=.+.+.|++.|.+++||++.||+..|.+
T Consensus 12 ~~~~l~~L~~M-GF~~~~~~~~AL~~t~gn~e~A~e~L~~~ 51 (52)
T 2jy5_A 12 FQQQLEQLSAM-GFLNREANLQALIATGGDINAAIERLLGS 51 (52)
T ss_dssp THHHHHHHHHT-TCCCHHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHHHhCCCHHHHHHHHHhC
Confidence 46799999999 54499999999999999999999988864
No 241
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=96.18 E-value=0.0032 Score=58.76 Aligned_cols=89 Identities=11% Similarity=0.066 Sum_probs=58.0
Q ss_pred cccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccC-C-hhHHHHHHhcCCCCCCeE
Q 021440 122 NGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDD-T-SEGWKVCSFYNMDSIPAV 199 (312)
Q Consensus 122 ~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~d-s-~EG~~~~~~Y~~~~~P~i 199 (312)
.+....++.+..++.+ +|.+..+||.+|+++..- |. ++- +.+-+..++.+ . .+..++++.|++..+|++
T Consensus 185 s~~~~~~la~~l~~~~--vV~F~A~WC~~Ck~l~p~-le-----~lA-~~l~~Vd~d~~d~~~~~~~la~~~gI~~vPT~ 255 (291)
T 3kp9_A 185 PSPLAVGLAAHLRQIG--GTMYGAYWCPHCQDQKEL-FG-----AAF-DQVPYVECSPNGPGTPQAQECTEAGITSYPTW 255 (291)
T ss_dssp CCSTHHHHHHHHHHTT--CEEEECTTCHHHHHHHHH-HG-----GGG-GGSCEEESCSSCSSSCCCHHHHTTTCCSTTEE
T ss_pred CCHHHHHHHHHhCCCC--EEEEECCCCHHHHHHHHH-HH-----HHH-HHcCEEEEeecCchhhHHHHHHHcCCcccCeE
Confidence 4445555555555554 689999999999999542 22 211 23334555532 2 336789999999999996
Q ss_pred EEEeCCCCeeEEEecCCCChHHHHHHH
Q 021440 200 LVIDPITGQKICSWCGMINPQPLGEML 226 (312)
Q Consensus 200 ~IIdprTGe~v~~~~G~~~~~~fl~~L 226 (312)
.+ .|+. +.|..+.+++.+.+
T Consensus 256 ~i----~G~~---~~G~~~~~~L~~~l 275 (291)
T 3kp9_A 256 II----NGRT---YTGVRSLEALAVAS 275 (291)
T ss_dssp EE----TTEE---EESCCCHHHHHHHT
T ss_pred EE----CCEE---ecCCCCHHHHHHHH
Confidence 55 4764 78988877655443
No 242
>1wgn_A UBAP1, ubiquitin associated protein; ubiquitin associated protein 1 (UBAP1), UBA domain, structural genomics; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=96.16 E-value=0.0086 Score=43.21 Aligned_cols=45 Identities=11% Similarity=0.199 Sum_probs=41.4
Q ss_pred CchhhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Q 021440 4 ESIDKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNE 50 (312)
Q Consensus 4 ~s~~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~~~ 50 (312)
+|..+.+.|.+.+++ |=+.+.|++-|+++++|+|.|++=-|.+.+
T Consensus 15 ls~se~e~V~~LvsM--GFs~~qA~kALKat~~NvErAaDWLFSH~D 59 (63)
T 1wgn_A 15 LSPSERQCVETVVNM--GYSYECVLRAMKKKGENIEQILDYLFAHSG 59 (63)
T ss_dssp CCHHHHHHHHHHHHH--HCCHHHHHHHHHHHCSCHHHHHHHHHHHSC
T ss_pred hCcchHHHHHHHHHc--CCCHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 466788899999999 899999999999999999999999999875
No 243
>1vej_A Riken cDNA 4931431F19; UBA domain, three helix bundle, ubiquitin associated domain, structural genomics; NMR {Mus musculus} SCOP: a.5.2.1
Probab=96.09 E-value=0.011 Score=44.22 Aligned_cols=42 Identities=14% Similarity=0.169 Sum_probs=37.3
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Q 021440 8 KESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNE 50 (312)
Q Consensus 8 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~~~ 50 (312)
-+++|.+.+++ +-.+.+.+++.|.+++||++.||...|.+.+
T Consensus 29 ye~qi~qL~eM-GF~dr~~~~~AL~~t~Gnve~Ave~L~~~~~ 70 (74)
T 1vej_A 29 YQQELEELKAL-GFANRDANLQALVATDGDIHAAIEMLLGASG 70 (74)
T ss_dssp SHHHHHHHHHH-TCCCHHHHHHHHHHTTSCHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHc-CCCcHHHHHHHHHHhCCCHHHHHHHHHhCCC
Confidence 46789999999 6578999999999999999999999998643
No 244
>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A
Probab=96.07 E-value=0.0092 Score=47.89 Aligned_cols=41 Identities=20% Similarity=0.263 Sum_probs=37.5
Q ss_pred HHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Q 021440 9 ESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNE 50 (312)
Q Consensus 9 ~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~~~ 50 (312)
++.|.+..++ +-.+.+.+++.|.+++||++.||+..|+.+.
T Consensus 67 ~~qL~qL~eM-GF~d~~~ni~AL~~t~Gdve~AVe~L~~~~~ 107 (108)
T 2cwb_A 67 QPQLQQLRDM-GIQDDELSLRALQATGGDIQAALELIFAGGA 107 (108)
T ss_dssp HHHHHHHHTT-TCCCHHHHHHHHHHHTSCHHHHHHHHHHTSC
T ss_pred HHHHHHHHHc-CCCCHHHHHHHHHHhCCCHHHHHHHHHhcCC
Confidence 6799999999 7789999999999999999999999998653
No 245
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=96.01 E-value=0.036 Score=47.90 Aligned_cols=85 Identities=18% Similarity=0.036 Sum_probs=55.4
Q ss_pred cCCeEEEEee-cCCCcccchhhcccCCCHHHHHHhh--ccEEEEEeccCChhHH---------------------HHHHh
Q 021440 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIIS--VNFIFWQEYDDTSEGW---------------------KVCSF 190 (312)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~~~~V~~~i~--~nFIfwq~~~ds~EG~---------------------~~~~~ 190 (312)
.+|+++|++. +.||..|..-- +.+.++.+ .++.++.++.|+++.. .++..
T Consensus 77 ~Gk~vvl~F~~~~~c~~C~~e~------~~l~~l~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~ 150 (200)
T 3zrd_A 77 AGKRKVLNIFPSIDTGVCAASV------RKFNQLAGELENTVVLCISSDLPFAQSRFCGAEGLSNVITLSTLRGADFKQA 150 (200)
T ss_dssp TTSEEEEEECSCCCCSCCCHHH------HHHHHHHHTSTTEEEEEEESSCHHHHTTCTTTTTCTTEEEEETTSCTHHHHH
T ss_pred CCCcEEEEEECCCCCchhHHHH------HHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHcCCCCceEEecCchHHHHHH
Confidence 5799999998 67999997643 33344433 4677777777765432 33444
Q ss_pred cCCC---------CCCeEEEEeCCCCeeEEEecCC-----CChHHHHHHH
Q 021440 191 YNMD---------SIPAVLVIDPITGQKICSWCGM-----INPQPLGEML 226 (312)
Q Consensus 191 Y~~~---------~~P~i~IIdprTGe~v~~~~G~-----~~~~~fl~~L 226 (312)
|.+. ..|++.|||+ .|+.+..+.|. .+.+++++.|
T Consensus 151 ygv~~~~~~~~g~~~p~~~lID~-~G~I~~~~~~~~~~~~~~~~~~l~~L 199 (200)
T 3zrd_A 151 YGVAITEGPLAGLTARAVVVLDG-QDNVIYSELVNEITTEPNYDAALAAL 199 (200)
T ss_dssp TTCEECSSTTTTSBCCEEEEECT-TSBEEEEEECSBTTSCCCHHHHHHHH
T ss_pred hCceeecccCCCccccEEEEECC-CCeEEEEEecCCcccCCCHHHHHHhh
Confidence 5442 2599999997 69888776432 3455665554
No 246
>2l2d_A OTU domain-containing protein 7A; UBA fold, structural genomics, PSI-biology, protein structur initiative, northeast structural genomics consortium; NMR {Homo sapiens}
Probab=95.98 E-value=0.011 Score=42.95 Aligned_cols=43 Identities=23% Similarity=0.393 Sum_probs=38.8
Q ss_pred CchhhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHh
Q 021440 4 ESIDKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFA 47 (312)
Q Consensus 4 ~s~~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~ 47 (312)
+.-+.+..|..|+-- ||+++..||.+|+--||||..|++.|=.
T Consensus 13 mt~dmdavls~fvrs-tgaepgLaRDlleGKnWDl~AAL~D~eq 55 (73)
T 2l2d_A 13 MTLDMDAVLSDFVRS-TGAEPGLARDLLEGKNWDLTAALSDYEQ 55 (73)
T ss_dssp SSCCHHHHHHHHHHH-HCCCHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHh-cCCCcchhHHhhccCCccHhHHhhhHHH
Confidence 455688899999999 8999999999999999999999999844
No 247
>1wiv_A UBP14, ubiquitin-specific protease 14; ubiquitin associated domain, UBA domain, three helix bundle, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.5.2.1
Probab=95.94 E-value=0.012 Score=43.85 Aligned_cols=41 Identities=20% Similarity=0.284 Sum_probs=37.6
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Q 021440 8 KESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNE 50 (312)
Q Consensus 8 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~~~ 50 (312)
..++|.+.+++ |-+.+.|++-|.+++||++.|++-.|++.+
T Consensus 29 ~~~~v~~L~~M--GF~~~~a~~AL~~t~~nve~Ave~L~~~~~ 69 (73)
T 1wiv_A 29 DQSSVDTLLSF--GFAEDVARKALKASGGDIEKATDWVFNNSG 69 (73)
T ss_dssp CHHHHHHHHHH--TCCHHHHHHHHHHTTSCHHHHHHHHHHSCC
T ss_pred CHHHHHHHHHc--CCCHHHHHHHHHHhCCCHHHHHHHHHhCCC
Confidence 56789999999 899999999999999999999999998654
No 248
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=95.93 E-value=0.01 Score=49.02 Aligned_cols=87 Identities=13% Similarity=-0.050 Sum_probs=51.8
Q ss_pred cCCeEEEEee-cCCCcccchhhcccCCCHHHHHHhh--ccEEEEEeccCChh---------------------HHHHHHh
Q 021440 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIIS--VNFIFWQEYDDTSE---------------------GWKVCSF 190 (312)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~~~~V~~~i~--~nFIfwq~~~ds~E---------------------G~~~~~~ 190 (312)
++||++|++. +.||..|..--. .+.++.+ .++.++.++.|+++ ...++..
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~~------~l~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~ 114 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQTR------RFNEELAGLDNTVVLTVSMDLPFAQKRWCGAEGLDNAIMLSDYFDHSFGRD 114 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHH------HHHHHTTTCTTEEEEEEESSCHHHHHHHHHHHTCTTSEEEECTTTCHHHHH
T ss_pred CCCEEEEEEECCCCCCccHHHHH------HHHHHHHHcCCcEEEEEECCCHHHHHHHHHhcCCCCcEEecCCchhHHHHH
Confidence 5789999998 589999975321 1222211 23333333333322 2245555
Q ss_pred cCCC----C--CCeEEEEeCCCCeeEEEecCC-----CChHHHHHHHHH
Q 021440 191 YNMD----S--IPAVLVIDPITGQKICSWCGM-----INPQPLGEMLLP 228 (312)
Q Consensus 191 Y~~~----~--~P~i~IIdprTGe~v~~~~G~-----~~~~~fl~~L~~ 228 (312)
|.+. . .|++.|||+ .|+.+..+.|. .+.+++++.|++
T Consensus 115 ~gv~~~~~g~~~p~~~liD~-~G~i~~~~~g~~~~~~~~~~~~l~~l~~ 162 (163)
T 1psq_A 115 YALLINEWHLLARAVFVLDT-DNTIRYVEYVDNINSEPNFEAAIAAAKA 162 (163)
T ss_dssp HTCBCTTTCSBCCEEEEECT-TCBEEEEEECSBTTSCCCHHHHHHHHHH
T ss_pred hCCccccCCceEEEEEEEcC-CCeEEEEEecCCcCCCCCHHHHHHHHHh
Confidence 6553 2 399999997 69988888663 234777777653
No 249
>2dkl_A Trinucleotide repeat containing 6C protein; TNRC6C, KIAA1582 protein, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=95.87 E-value=0.013 Score=44.96 Aligned_cols=40 Identities=20% Similarity=0.291 Sum_probs=37.2
Q ss_pred HHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Q 021440 9 ESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNE 50 (312)
Q Consensus 9 ~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~~~ 50 (312)
.++|.+++++ |-+.+.|++.|..++||+|.|++-.|++..
T Consensus 22 ~~~I~qL~~M--GF~~~~a~~AL~~~n~n~e~A~ewL~~h~~ 61 (85)
T 2dkl_A 22 SRLIKQLTDM--GFPREPAEEALKSNNMNLDQAMSALLEKKV 61 (85)
T ss_dssp HHHHHHHHHH--TCCHHHHHHHHHHTTSCHHHHHHHHHTTSC
T ss_pred HHHHHHHHHc--CCCHHHHHHHHHHcCCCHHHHHHHHHHCcC
Confidence 6789999999 899999999999999999999999998753
No 250
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=95.75 E-value=0.045 Score=48.81 Aligned_cols=86 Identities=12% Similarity=0.123 Sum_probs=60.7
Q ss_pred HHcCCeEEEEeecCC--CcccchhhcccCCCHHHHHHhhc--c------EEEEEeccCChhHHHHHHhcCCCCCCeEEEE
Q 021440 133 LAQDKWLLVNLQSTK--EFSSLMLNRDTWGNEAVSQIISV--N------FIFWQEYDDTSEGWKVCSFYNMDSIPAVLVI 202 (312)
Q Consensus 133 k~~~KwLLVniq~~~--~f~c~~lnRDvw~~~~V~~~i~~--n------FIfwq~~~ds~EG~~~~~~Y~~~~~P~i~II 202 (312)
++-.+.|+|.+..+| |..|+.|. +.+.++-+. . ..|..++.+ +...++..|++..+|+++|+
T Consensus 22 ~~~~~pv~v~~~~~~~~c~~c~~~~------~~l~ela~~~~~~~~~~~v~~~~vd~d--~~~~~~~~~gv~~~Pt~~i~ 93 (243)
T 2hls_A 22 AEMVNPVEVHVFLSKSGCETCEDTL------RLMKLFEEESPTRNGGKLLKLNVYYRE--SDSDKFSEFKVERVPTVAFL 93 (243)
T ss_dssp TTCCSCEEEEEEECSSSCTTHHHHH------HHHHHHHHHSCEETTEESEEEEEEETT--TTHHHHHHTTCCSSSEEEET
T ss_pred HhCCCCEEEEEEeCCCCCCchHHHH------HHHHHHHHhccCCCCCceeEEEEecCC--cCHHHHHhcCCCcCCEEEEE
Confidence 345689999999999 99999883 333443332 1 556666554 45678999999999999998
Q ss_pred eCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021440 203 DPITGQKICSWCGMINPQPLGEMLLPFMD 231 (312)
Q Consensus 203 dprTGe~v~~~~G~~~~~~fl~~L~~fl~ 231 (312)
+ | ...+.|.....++...+..+++
T Consensus 94 ~---g--~~~~~G~~~~~~l~~fv~~~l~ 117 (243)
T 2hls_A 94 G---G--EVRWTGIPAGEEIRALVEVIMR 117 (243)
T ss_dssp T---T--TEEEESCCCTTHHHHHHHHHHH
T ss_pred C---C--ceeEcCCCcHHHHHHHHHHHHh
Confidence 3 5 5557787666677666666664
No 251
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=95.73 E-value=0.012 Score=48.81 Aligned_cols=74 Identities=19% Similarity=0.057 Sum_probs=47.3
Q ss_pred cCCeEEEEee-cCCCcccchhhcccCCCHHHHHHhh--ccEEEEEeccCChhH---------------------HHHHHh
Q 021440 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIIS--VNFIFWQEYDDTSEG---------------------WKVCSF 190 (312)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~~~~V~~~i~--~nFIfwq~~~ds~EG---------------------~~~~~~ 190 (312)
.+||++|++. ..||..|..-- +.+.++.+ .++.++.++.|+++. ..++..
T Consensus 42 ~gk~vvl~f~~~~~c~~C~~e~------~~l~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~ 115 (165)
T 1q98_A 42 ASKRKVLNIFPSIDTGVCATSV------RKFNQQAAKLSNTIVLCISADLPFAQARFCGAEGIENAKTVSTFRNHALHSQ 115 (165)
T ss_dssp TTSEEEEEECSCSCSSCCCHHH------HHHHHHHHHSTTEEEEEEESSCHHHHTTCTTTTTCTTEEEEECTTCTHHHHH
T ss_pred CCCeEEEEEECCCCCCccHHHH------HHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHcCCCceEEeeccccchHHHH
Confidence 5789999998 78999997542 22333322 456666666655432 234445
Q ss_pred cCCCC---------CCeEEEEeCCCCeeEEEecC
Q 021440 191 YNMDS---------IPAVLVIDPITGQKICSWCG 215 (312)
Q Consensus 191 Y~~~~---------~P~i~IIdprTGe~v~~~~G 215 (312)
|.+.. .|++.|||+ .|+.+..+.|
T Consensus 116 ~gv~~~~~~~~g~~~p~~~liD~-~G~i~~~~~~ 148 (165)
T 1q98_A 116 LGVDIQTGPLAGLTSRAVIVLDE-QNNVLHSQLV 148 (165)
T ss_dssp TTCEECSSTTTTSBCCEEEEECT-TSBEEEEEEC
T ss_pred hCceecccccCCccceeEEEEcC-CCEEEEEEeC
Confidence 55421 489999996 5888888764
No 252
>2dak_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5, USP 5, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.68 E-value=0.011 Score=42.55 Aligned_cols=42 Identities=24% Similarity=0.354 Sum_probs=38.1
Q ss_pred hhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Q 021440 7 DKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNE 50 (312)
Q Consensus 7 ~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~~~ 50 (312)
-..+.|.+.+++ |-+.+.|++-|.+++||+|.|++-.|++.+
T Consensus 8 ~~~~~v~~L~~M--GF~~~~a~~AL~~t~~nve~A~e~L~~~~~ 49 (63)
T 2dak_A 8 PPEDCVTTIVSM--GFSRDQALKALRATNNSLERAVDWIFSHID 49 (63)
T ss_dssp CCHHHHHHHHHH--TCCHHHHHHHHHHTTSCSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHc--CCCHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 357899999999 889999999999999999999999998654
No 253
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=95.58 E-value=0.024 Score=49.56 Aligned_cols=83 Identities=10% Similarity=0.189 Sum_probs=57.6
Q ss_pred HcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc--cEEEEEeccC-------------------------------
Q 021440 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDD------------------------------- 180 (312)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~--nFIfwq~~~d------------------------------- 180 (312)
...|..+|.+.++||..|+.|... +.++.+. .+++..+...
T Consensus 84 ~~~k~~vv~F~d~~Cp~C~~~~~~------l~~~~~~~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~ 157 (211)
T 1t3b_A 84 KNEKHVVTVFMDITCHYCHLLHQQ------LKEYNDLGITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNL 157 (211)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHTT------HHHHHHTTEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCC
T ss_pred CCCCEEEEEEECCCCHhHHHHHHH------HHHHHhCCcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCC
Confidence 357899999999999999999764 4555442 3444333221
Q ss_pred ---------ChhHHHHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHH
Q 021440 181 ---------TSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLP 228 (312)
Q Consensus 181 ---------s~EG~~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~ 228 (312)
-.+..++++.|.+...|+++|.| |+ .+.|+.++++|.+.|.+
T Consensus 158 ~~~~~~~~~v~~~~~l~~~~gV~gTPt~vi~n---G~---~~~G~~~~~~l~~~l~~ 208 (211)
T 1t3b_A 158 PKEVKTPNIVKKHYELGIQFGVRGTPSIVTST---GE---LIGGYLKPADLLRALEE 208 (211)
T ss_dssp CSSCCCSSHHHHHHHHHHHHTCCSSCEEECTT---SC---CCCSCCCHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHcCCCcCCEEEEeC---CE---EecCCCCHHHHHHHHHh
Confidence 01334567889999999999843 65 36898898887766643
No 254
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=95.50 E-value=0.037 Score=45.75 Aligned_cols=78 Identities=8% Similarity=-0.117 Sum_probs=44.7
Q ss_pred HcCCeEEEEee-cCCCcccc--hhhcccCCCHHHHHHhhccEE-EEEeccCChhH---------------------HHHH
Q 021440 134 AQDKWLLVNLQ-STKEFSSL--MLNRDTWGNEAVSQIISVNFI-FWQEYDDTSEG---------------------WKVC 188 (312)
Q Consensus 134 ~~~KwLLVniq-~~~~f~c~--~lnRDvw~~~~V~~~i~~nFI-fwq~~~ds~EG---------------------~~~~ 188 (312)
-++||++|++. ++||..|. .+. .+ ++...+|-..++. ++.++.|+++. ..++
T Consensus 33 ~~gk~vvl~f~~~~~c~~C~~~e~~-~l--~~~~~~~~~~~v~~vv~Is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~ 109 (162)
T 1tp9_A 33 VAGKKVILFGVPGAFTPTCSLKHVP-GF--IEKAGELKSKGVTEILCISVNDPFVMKAWAKSYPENKHVKFLADGSATYT 109 (162)
T ss_dssp HTTSEEEEEEESCTTCHHHHHTHHH-HH--HHHHHHHHHTTCCCEEEEESSCHHHHHHHHHTCTTCSSEEEEECTTSHHH
T ss_pred hCCCcEEEEEeCCCCCCCCCHHHHH-HH--HHHHHHHHHCCCCEEEEEECCCHHHHHHHHHhcCCCCCeEEEECCCchHH
Confidence 36899999999 89999998 221 11 0111122223444 55555554332 2344
Q ss_pred HhcCCC-----------CCCeEEEEeCCCCeeEEEecCC
Q 021440 189 SFYNMD-----------SIPAVLVIDPITGQKICSWCGM 216 (312)
Q Consensus 189 ~~Y~~~-----------~~P~i~IIdprTGe~v~~~~G~ 216 (312)
+.|.+. ..|++.||| .|+....+.|.
T Consensus 110 ~~~gv~~~~~~~g~~~~~~p~~~vid--~G~i~~~~~~~ 146 (162)
T 1tp9_A 110 HALGLELDLQEKGLGTRSRRFALLVD--DLKVKAANIEG 146 (162)
T ss_dssp HHTTCEEEETTTTSEEEECCEEEEEE--TTEEEEEEECS
T ss_pred HHcCcccccccCCCCccceeEEEEEE--CCEEEEEEeeC
Confidence 555543 268888888 58877776553
No 255
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=95.49 E-value=0.046 Score=49.00 Aligned_cols=88 Identities=13% Similarity=0.080 Sum_probs=58.5
Q ss_pred cCCeEEEEeecCC-Ccccc---------hhhcccCCCHHHHHHhhccEEEEEeccCChh---------------------
Q 021440 135 QDKWLLVNLQSTK-EFSSL---------MLNRDTWGNEAVSQIISVNFIFWQEYDDTSE--------------------- 183 (312)
Q Consensus 135 ~~KwLLVniq~~~-~f~c~---------~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~E--------------------- 183 (312)
.+||++|+++..| |+.|. .|++. | .++.++.++.|+++
T Consensus 47 ~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~-~----------~gv~VvgIS~Ds~~~~~~f~~~~gl~~fplLsD~~ 115 (224)
T 3keb_A 47 SHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS-W----------PHLKLIVITVDSPSSLARARHEHGLPNIALLSTLR 115 (224)
T ss_dssp TTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT-C----------TTSEEEEEESSCHHHHHHHHHHHCCTTCEEEESTT
T ss_pred CCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH-c----------CCCEEEEEECCCHHHHHHHHHHcCCCCceEEEcCC
Confidence 4789999999877 89998 23222 1 34455555555432
Q ss_pred HHHHHHhcCCCC---------CCeEEEEeCCCCeeEEEec-----CCCChHHHHHHHHHHHhhCC
Q 021440 184 GWKVCSFYNMDS---------IPAVLVIDPITGQKICSWC-----GMINPQPLGEMLLPFMDRSP 234 (312)
Q Consensus 184 G~~~~~~Y~~~~---------~P~i~IIdprTGe~v~~~~-----G~~~~~~fl~~L~~fl~~~~ 234 (312)
...++..|.+.. .|++.|||+ .|...+.|. +..+.+++++.|........
T Consensus 116 ~~~vak~yGv~~~~~~~~G~~~p~tfvID~-dG~I~~~~~~~~~~~~pd~~evl~~L~~l~~~~~ 179 (224)
T 3keb_A 116 GRDFHKRYGVLITEYPLSGYTSPAIILADA-ANVVHYSERLANTRDFFDFDAIEKLLQEGEQQAM 179 (224)
T ss_dssp CTTHHHHTTCBCCSTTSTTCBCCEEEEECT-TCBEEEEEECSBTTCCCCHHHHHHHHHHHHHHC-
T ss_pred chHHHHHhCCccccccccCCccCEEEEEcC-CCEEEEEEecCCCCCCCCHHHHHHHHHHhhhccc
Confidence 234666676632 699999997 698887753 23578999999988766543
No 256
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=95.41 E-value=0.052 Score=47.76 Aligned_cols=89 Identities=9% Similarity=-0.101 Sum_probs=53.7
Q ss_pred cCCeEEEEee-cCCCcccc-hhhcccCCCHHHHHHhhccE-EEEEeccCChhH--------------------HHHHHhc
Q 021440 135 QDKWLLVNLQ-STKEFSSL-MLNRDTWGNEAVSQIISVNF-IFWQEYDDTSEG--------------------WKVCSFY 191 (312)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~-~lnRDvw~~~~V~~~i~~nF-Ifwq~~~ds~EG--------------------~~~~~~Y 191 (312)
.+||++|++. .+||+.|. .--..+ ++...+|-..++ .++.++.|+++. ..++..|
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l--~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~ 109 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRY--NELAPVFKKYGVDDILVVSVNDTFVMNAWKEDEKSENISFIPDGNGEFTEGM 109 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHH--HHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTSEEEECTTSHHHHHT
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHH--HHHHHHHHHCCCCEEEEEEcCCHHHHHHHHHhcCCCceEEEECCCcHHHHHh
Confidence 5799999998 99999998 221111 111222223456 666666665432 1244455
Q ss_pred CCC-----------CCCeEEEEeCCCCeeEEEecCC---------CChHHHHHHHH
Q 021440 192 NMD-----------SIPAVLVIDPITGQKICSWCGM---------INPQPLGEMLL 227 (312)
Q Consensus 192 ~~~-----------~~P~i~IIdprTGe~v~~~~G~---------~~~~~fl~~L~ 227 (312)
.+. ..|+..|| + .|.....+.|. .+++++++.|.
T Consensus 110 gv~~~~~~~g~~~~~~p~t~li-~-~G~i~~~~~~~~~~~~~~~~~~~~~il~~l~ 163 (241)
T 1nm3_A 110 GMLVGKEDLGFGKRSWRYSMLV-K-NGVVEKMFIEPNEPGDPFKVSDADTMLKYLA 163 (241)
T ss_dssp TCEEECTTTTCCEEECCEEEEE-E-TTEEEEEEECCSCSSCCCSSSSHHHHHHHHC
T ss_pred CceeecccccCcccceeEEEEE-E-CCEEEEEEEeccCCCccceecCHHHHHHHhh
Confidence 542 34888888 5 79988887764 24566655554
No 257
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=95.40 E-value=0.041 Score=49.22 Aligned_cols=91 Identities=11% Similarity=-0.035 Sum_probs=57.2
Q ss_pred CeEEEEee-cCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhH---------------------------HHHH
Q 021440 137 KWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEG---------------------------WKVC 188 (312)
Q Consensus 137 KwLLVniq-~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG---------------------------~~~~ 188 (312)
||++|+++ .+||+.|..--..+ .....+|-+.++-++.++.|+.+. .+++
T Consensus 30 ~~vvL~f~pa~~cpvC~~el~~l--~~l~~ef~~~~v~vigIS~D~~~~~~~~~~~i~~~~~~~~~~~fpil~D~~~~va 107 (233)
T 2v2g_A 30 SWGVLFSHPRDFTPVSTTELGRV--IQLEGDFKKRGVKLIALSCDNVADHKEWSEDVKCLSGVKGDMPYPIIADETRELA 107 (233)
T ss_dssp SEEEEEECSCSSCHHHHHHHHHH--HHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHHTCCSSCSSCEEECTTCHHH
T ss_pred CeEEEEEECCCCCCCcHHHHHHH--HHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhhCcccCCceEEEECChHHHH
Confidence 49999998 78999997643221 111222334566677776666432 1234
Q ss_pred HhcCCC------------CCCeEEEEeCCCCeeEEEecCC----CChHHHHHHHHHHH
Q 021440 189 SFYNMD------------SIPAVLVIDPITGQKICSWCGM----INPQPLGEMLLPFM 230 (312)
Q Consensus 189 ~~Y~~~------------~~P~i~IIdprTGe~v~~~~G~----~~~~~fl~~L~~fl 230 (312)
..|.+. ..|.+.|||| .|+....+.|. .+.++++..|....
T Consensus 108 ~~ygv~~~~~~~~~g~~~~~p~~fiID~-~G~I~~~~~~~~~~gr~~~eilr~l~~Lq 164 (233)
T 2v2g_A 108 VKLGMVDPDERTSTGMPLTCRAVFIIGP-DKKLKLSILYPATTGRNFSEILRVIDSLQ 164 (233)
T ss_dssp HHTTCEEEEEECTTCCEEECEEEEEECT-TSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHhCCcCcccccCCCcccccceEEEECC-CCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 445442 4799999997 58887776543 25778877777654
No 258
>2dna_A Unnamed protein product; ubiquitin associated domain, DSK2 protein, proteasome, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.5.2.1
Probab=95.36 E-value=0.043 Score=40.30 Aligned_cols=42 Identities=12% Similarity=0.031 Sum_probs=37.7
Q ss_pred HHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCCC
Q 021440 9 ESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNEA 51 (312)
Q Consensus 9 ~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~~~~ 51 (312)
.+.|.+.+++ +-.+.+.+++.|.++++|++.||...|.+.+.
T Consensus 20 ~~ql~qL~~M-GF~d~~an~~AL~at~Gnve~Ave~L~~~~~~ 61 (67)
T 2dna_A 20 SKEMECLQAM-GFVNYNANLQALIATDGDTNAAIYKLKSSQGF 61 (67)
T ss_dssp HHHHHHHHHH-TCCCHHHHHHHHHHTTSCHHHHHHHHHHCCSS
T ss_pred HHHHHHHHHc-CCCcHHHHHHHHHHcCCCHHHHHHHHHhCCCc
Confidence 5689999999 66888888999999999999999999998654
No 259
>2ooa_A E3 ubiquitin-protein ligase CBL-B; alpha-helical domain; 1.56A {Homo sapiens} PDB: 2oob_A 2jnh_A 2do6_A
Probab=95.17 E-value=0.039 Score=38.42 Aligned_cols=37 Identities=11% Similarity=0.139 Sum_probs=34.4
Q ss_pred HHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHh
Q 021440 9 ESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFA 47 (312)
Q Consensus 9 ~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~ 47 (312)
.+.|.+.|++ |-|.+.|++-|..++||+|.|.+.-.+
T Consensus 12 ~~~Ia~Lm~m--GFsr~~ai~AL~~a~nnve~AaniLle 48 (52)
T 2ooa_A 12 DAKIAKLMGE--GYAFEEVKRALEIAQNNVEVARSILRE 48 (52)
T ss_dssp HHHHHHHHHT--TCCHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHc--CCCHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 4899999999 999999999999999999999988765
No 260
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=95.16 E-value=0.13 Score=50.93 Aligned_cols=82 Identities=10% Similarity=0.000 Sum_probs=60.0
Q ss_pred HcCCeEEEEeecCCCcccchhhcccCCCHHHHHHh--hccEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCCCCeeEE
Q 021440 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQII--SVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKIC 211 (312)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i--~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdprTGe~v~ 211 (312)
..++..++.+..+||.+|+++..- +.++. +.+..|..++.+ +...++..|++.+.|++.| .|+.+.
T Consensus 115 ~~~~~~i~~f~a~~C~~C~~~~~~------l~~~a~~~~~v~~~~vd~~--~~~~~~~~~~i~svPt~~i----~g~~~~ 182 (521)
T 1hyu_A 115 IDGDFEFETYYSLSCHNCPDVVQA------LNLMAVLNPRIKHTAIDGG--TFQNEITERNVMGVPAVFV----NGKEFG 182 (521)
T ss_dssp CCSCEEEEEEECTTCSSHHHHHHH------HHHHHHHCTTEEEEEEETT--TCHHHHHHTTCCSSSEEEE----TTEEEE
T ss_pred cCCCcceEEEECCCCcCcHHHHHH------HHHHHhHcCceEEEEEech--hhHHHHHHhCCCccCEEEE----CCEEEe
Confidence 346677888889999999998643 22222 336777777655 5667899999999999976 487764
Q ss_pred EecCCCChHHHHHHHHHH
Q 021440 212 SWCGMINPQPLGEMLLPF 229 (312)
Q Consensus 212 ~~~G~~~~~~fl~~L~~f 229 (312)
.|..+.+++++.|...
T Consensus 183 --~G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 183 --QGRMTLTEIVAKVDTG 198 (521)
T ss_dssp --ESCCCHHHHHHHHCCS
T ss_pred --cCCCCHHHHHHHHhhc
Confidence 4888888887776443
No 261
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=95.10 E-value=0.039 Score=43.81 Aligned_cols=76 Identities=12% Similarity=0.128 Sum_probs=51.3
Q ss_pred eEEEEeecCCCcccchhhcccCCCHHHHHHhhc-cEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCCCCeeEEEecCC
Q 021440 138 WLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV-NFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGM 216 (312)
Q Consensus 138 wLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~-nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~ 216 (312)
..+|.+..+||..|+.+.+ -+.++..+ .+-|..+|++.. ..++..|.+. .|+|+++. .|+.+ ..|.
T Consensus 30 ~~vv~y~~~~C~~C~~a~~------~L~~l~~e~~i~~~~vDId~d--~~l~~~ygv~-VP~l~~~~--dG~~v--~~g~ 96 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIA------SLRVLQKKSWFELEVINIDGN--EHLTRLYNDR-VPVLFAVN--EDKEL--CHYF 96 (107)
T ss_dssp CCEEEEECSSCHHHHHHHH------HHHHHHHHSCCCCEEEETTTC--HHHHHHSTTS-CSEEEETT--TTEEE--ECSS
T ss_pred cEEEEEeCCCChhHHHHHH------HHHHHHHhcCCeEEEEECCCC--HHHHHHhCCC-CceEEEEE--CCEEE--EecC
Confidence 3478888999999999843 23333333 366677777642 3467788886 99997664 47766 3577
Q ss_pred CChHHHHHHH
Q 021440 217 INPQPLGEML 226 (312)
Q Consensus 217 ~~~~~fl~~L 226 (312)
.+++++.+.|
T Consensus 97 ~~~~~L~~~L 106 (107)
T 2fgx_A 97 LDSDVIGAYL 106 (107)
T ss_dssp CCCHHHHHHH
T ss_pred CCHHHHHHHh
Confidence 8888765544
No 262
>1jkg_B TAP; NTF2-like domain, transport protein; 1.90A {Homo sapiens} SCOP: d.17.4.2 PDB: 1jn5_B 1go5_A
Probab=95.03 E-value=0.004 Score=56.79 Aligned_cols=46 Identities=17% Similarity=0.314 Sum_probs=0.0
Q ss_pred CchhhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Q 021440 4 ESIDKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNE 50 (312)
Q Consensus 4 ~s~~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~~~ 50 (312)
++..++++|.+|+.. ||-+.+-|.++|+.++||++.|+..|.+.-.
T Consensus 194 ~~~~q~~~v~~~~~~-T~mn~~~s~~cL~~~~Wd~~~A~~~F~~l~~ 239 (250)
T 1jkg_B 194 LSPEQQEMLQAFSTQ-SGMNLEWSQKCLQDNNWDYTRSAQAFTHLKA 239 (250)
T ss_dssp -----------------------------------------------
T ss_pred CCHHHHHHHHHHHHH-hCCCHHHHHHHHHHcCCCHHHHHHHHHHHHh
Confidence 345677899999999 9999999999999999999999999977543
No 263
>2dai_A Ubadc1, ubiquitin associated domain containing 1; UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.94 E-value=0.036 Score=42.30 Aligned_cols=41 Identities=20% Similarity=0.267 Sum_probs=37.9
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Q 021440 8 KESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNE 50 (312)
Q Consensus 8 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~~~ 50 (312)
..+.|.+.+++ |-+.+.|++-|.+++||+|.|++-.|++.+
T Consensus 29 ~e~~i~~L~~M--GF~~~~a~~AL~~t~~nve~A~ewL~~~~~ 69 (83)
T 2dai_A 29 DEAALRQLTEM--GFPENRATKALQLNHMSVPQAMEWLIEHAE 69 (83)
T ss_dssp CHHHHHHHHHH--TCCHHHHHHHHHHTTSCHHHHHHHHHHGGG
T ss_pred CHHHHHHHHHc--CCCHHHHHHHHHHhCCCHHHHHHHHHHCCC
Confidence 56789999999 999999999999999999999999999754
No 264
>2cp8_A NEXT to BRCA1 gene 1 protein; UBA domain, structural genomics, human, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=94.90 E-value=0.043 Score=38.61 Aligned_cols=46 Identities=7% Similarity=0.151 Sum_probs=39.7
Q ss_pred chhhHH-HHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCCC
Q 021440 5 SIDKES-RISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNEA 51 (312)
Q Consensus 5 s~~~~~-~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~~~~ 51 (312)
+.++.. ++.++.++ +=.|.+.-++.|..+||||+.||...+..+.+
T Consensus 5 ~ee~~a~~L~~L~eM-GF~D~~~N~~aL~~~~gnv~~aI~~Ll~~~~~ 51 (54)
T 2cp8_A 5 SSGQTAALMAHLFEM-GFCDRQLNLRLLKKHNYNILQVVTELLQLSGP 51 (54)
T ss_dssp SCTTHHHHHHHHHHH-TCCCHHHHHHHHTTTTTCHHHHHHHHHHHSSS
T ss_pred HHHhhHHHHHHHHHc-CCCcHHHHHHHHHHcCCCHHHHHHHHHhccCC
Confidence 334444 89999999 88899999999999999999999999987654
No 265
>1whc_A RSGI RUH-027, UBA/UBX 33.3 kDa protein; UBA domain, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Mus musculus} SCOP: a.5.2.1
Probab=94.79 E-value=0.046 Score=39.53 Aligned_cols=41 Identities=17% Similarity=0.246 Sum_probs=37.0
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHc-CCCHHHHHHHHHhcCC
Q 021440 8 KESRISSFLEIAVGASGVTAIECLQAT-SWKLDEAILLFFAVNE 50 (312)
Q Consensus 8 ~~~~i~~F~~iTt~~~~~~A~~~Le~~-~wdLe~Av~lff~~~~ 50 (312)
..+.|.+++++ |-+.+.|++-|.++ +||+|.|++-.|++.+
T Consensus 9 ~~~~v~~L~~M--GF~~~~a~~AL~~t~~~nve~A~ewLl~~~~ 50 (64)
T 1whc_A 9 ELTALESLIEM--GFPRGRAEKALALTGNQGIEAAMDWLMEHED 50 (64)
T ss_dssp CCCHHHHHHTT--TCCHHHHHHHHHHHTSCCHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHc--CCCHHHHHHHHHHhcCCCHHHHHHHHHhCCC
Confidence 45689999999 89999999999999 7999999999999764
No 266
>2cpw_A CBL-interacting protein STS-1 variant; ubiquitin associated domain, UBA, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=94.69 E-value=0.037 Score=40.10 Aligned_cols=40 Identities=20% Similarity=0.243 Sum_probs=36.2
Q ss_pred HHHHHhhhccccCCCHHHHHHHHHHcCC-CHHHHHHHHHhcCC
Q 021440 9 ESRISSFLEIAVGASGVTAIECLQATSW-KLDEAILLFFAVNE 50 (312)
Q Consensus 9 ~~~i~~F~~iTt~~~~~~A~~~Le~~~w-dLe~Av~lff~~~~ 50 (312)
.+.|.+.+++ |-+.+.|++-|.+++| |+|.|++-.|++.+
T Consensus 20 e~~i~~L~~M--GF~~~~a~~AL~~t~~~nve~A~ewL~~~~~ 60 (64)
T 2cpw_A 20 GSALDVLLSM--GFPRARAQKALASTGGRSVQTACDWLFSHSG 60 (64)
T ss_dssp CCHHHHHHHH--TCCHHHHHHHHHHTTTSCHHHHHHHHHSCCS
T ss_pred HHHHHHHHHc--CCCHHHHHHHHHHcCCCCHHHHHHHHHhCCC
Confidence 3579999999 8999999999999999 99999999998654
No 267
>1otr_A Protein CUE2; protein-protein complex, cell cycle; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.4
Probab=94.66 E-value=0.058 Score=37.18 Aligned_cols=42 Identities=24% Similarity=0.225 Sum_probs=37.0
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcC
Q 021440 8 KESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVN 49 (312)
Q Consensus 8 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~~ 49 (312)
.++.+...+++=-..+..++++.|+.++||++.||+..++..
T Consensus 4 ~e~~v~~L~EMFP~~~~~~ik~~L~~~~Gd~d~Ai~~LL~~~ 45 (49)
T 1otr_A 4 HESKLSILMDMFPAISKSKLQVHLLENNNDLDLTIGLLLKEN 45 (49)
T ss_dssp HHHHHHHHHHHCSSSCHHHHHHHHHHTTTCSHHHHHHHHHHT
T ss_pred hHHHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHhcc
Confidence 456777777877889999999999999999999999998864
No 268
>1vdl_A Ubiquitin carboxyl-terminal hydrolase 25; UBA domain, mouse cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.5.2.1
Probab=94.56 E-value=0.12 Score=38.53 Aligned_cols=42 Identities=17% Similarity=0.178 Sum_probs=37.9
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcC
Q 021440 8 KESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVN 49 (312)
Q Consensus 8 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~~ 49 (312)
++-++.|..+||+..|...=.+-|++.++||..||.+.-+..
T Consensus 24 ~q~lLnQLrEITGiqD~~~L~~ALkas~Gdl~~AV~~LT~~~ 65 (80)
T 1vdl_A 24 QQTFLNQLREITGINDAQILQQALKDSNGNLELAVAFLTAKN 65 (80)
T ss_dssp HHHHHHHHHHHSCCCCHHHHHHHHHHHTSCHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHhccCCHHHHHHHHhccc
Confidence 456899999998889999999999999999999999987754
No 269
>2d9s_A CBL E3 ubiquitin protein ligase; UBA domain, dimer, protein binding, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=94.56 E-value=0.065 Score=37.44 Aligned_cols=40 Identities=15% Similarity=0.091 Sum_probs=36.0
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcC
Q 021440 8 KESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVN 49 (312)
Q Consensus 8 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~~ 49 (312)
-.+.|.+.|++ |-|.+.|++-|..++||+|.|.+...+..
T Consensus 9 ~e~~I~~L~~l--GF~r~~ai~AL~~a~nnve~Aa~iL~ef~ 48 (53)
T 2d9s_A 9 LSSEIERLMSQ--GYSYQDIQKALVIAHNNIEMAKNILREFS 48 (53)
T ss_dssp SHHHHHHHHHH--TCCHHHHHHHHHHTTTCHHHHHHHHHHHT
T ss_pred hHHHHHHHHHc--CCCHHHHHHHHHHhcCCHHHHHHHHHHhc
Confidence 34679999999 99999999999999999999999987754
No 270
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=94.52 E-value=0.18 Score=44.42 Aligned_cols=91 Identities=11% Similarity=0.042 Sum_probs=55.6
Q ss_pred CeEEE-EeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhH-----------------------------HH
Q 021440 137 KWLLV-NLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEG-----------------------------WK 186 (312)
Q Consensus 137 KwLLV-niq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG-----------------------------~~ 186 (312)
+|++| ++-.+||+.|..--..+ +....+|-+.++-++.++.|+.+. .+
T Consensus 32 ~~vvL~~~~a~~cp~C~~el~~l--~~l~~~f~~~~v~vi~IS~D~~~~~~~~~~~i~~~~~~~~~~~~~fpil~D~~~~ 109 (224)
T 1prx_A 32 SWGILFSHPRDFTPVCTTELGRA--AKLAPEFAKRNVKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNRE 109 (224)
T ss_dssp SEEEEEEESCSSCHHHHHHHHHH--HHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSCCCSCCSSCEEECTTCH
T ss_pred CeEEEEEECCCCCCCcHHHHHHH--HHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhhCcccccCcCcceeecCchH
Confidence 47555 45678999997543221 111223334567777777666432 13
Q ss_pred HHHhcCCC------------CCCeEEEEeCCCCeeEEEecCC----CChHHHHHHHHHHH
Q 021440 187 VCSFYNMD------------SIPAVLVIDPITGQKICSWCGM----INPQPLGEMLLPFM 230 (312)
Q Consensus 187 ~~~~Y~~~------------~~P~i~IIdprTGe~v~~~~G~----~~~~~fl~~L~~fl 230 (312)
++..|.+. ..|++.|||| .|+....+.|. .+.++++..|....
T Consensus 110 va~~ygv~~~~~~~~~g~~~~~p~~fiID~-~G~I~~~~~~~~~~gr~~~eil~~i~~l~ 168 (224)
T 1prx_A 110 LAILLGMLDPAEKDEKGMPVTARVVFVFGP-DKKLKLSILYPATTGRNFDEILRVVISLQ 168 (224)
T ss_dssp HHHHTTSSCSCTTCSSSCCTTCCEEEEECT-TSBEEEEEECCTTBCCCHHHHHHHHHHHH
T ss_pred HHHHhCCCCcccccCCCccccceEEEEECC-CCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 44556552 3799999998 58888777553 25788887777665
No 271
>2ekk_A UBA domain from E3 ubiquitin-protein ligase HUWE1; ubiquitin associated domain, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.32 E-value=0.061 Score=36.29 Aligned_cols=38 Identities=18% Similarity=0.393 Sum_probs=34.6
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhc
Q 021440 8 KESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAV 48 (312)
Q Consensus 8 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~ 48 (312)
..+.|.+.+++ |-+.+.|++-|.+++ |+|.|++-.|++
T Consensus 9 ~~~~v~~L~~M--GF~~~~a~~AL~~~~-n~e~A~~~L~~h 46 (47)
T 2ekk_A 9 NQQQLQQLMDM--GFTREHAMEALLNTS-TMEQATEYLLTH 46 (47)
T ss_dssp CHHHHHHHHHH--HCCHHHHHHHHHHSC-SHHHHHHHHHTC
T ss_pred CHHHHHHHHHc--CCCHHHHHHHHHHcC-CHHHHHHHHHcC
Confidence 57789999999 899999999999997 999999988864
No 272
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=94.24 E-value=0.061 Score=39.02 Aligned_cols=60 Identities=13% Similarity=0.087 Sum_probs=41.2
Q ss_pred EEEeecCCCcccchhhcccCCCHHHHHHhhc---cEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCCCCeeE
Q 021440 140 LVNLQSTKEFSSLMLNRDTWGNEAVSQIISV---NFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKI 210 (312)
Q Consensus 140 LVniq~~~~f~c~~lnRDvw~~~~V~~~i~~---nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdprTGe~v 210 (312)
++.+..+||..|+.+.+ .+.+++++ .|.+..++.+ .+...++..|++.++|+|.| .|+.+
T Consensus 4 ~~~f~~~~C~~C~~~~~------~l~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~gv~~vPt~~i----~g~~~ 66 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQ------AVANAIDPSKYTVEIVHLGTD-KARIAEAEKAGVKSVPALVI----DGAAF 66 (80)
T ss_dssp EEEEEECSCHHHHHHHH------HHHHHSCTTTEEEEEEETTTC-SSTHHHHHHHTCCEEEEEEE----TTEEE
T ss_pred eEEEeCCCCCchHHHHH------HHHHHHHhcCCeEEEEEecCC-hhhHHHHHHcCCCcCCEEEE----CCEEE
Confidence 44567889999999964 34556654 3666655542 13456778899999999876 37754
No 273
>2cp9_A EF-TS, EF-TSMT, elongation factor TS, mitochondrial; UBA, structural genomics, human, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.2
Probab=94.23 E-value=0.047 Score=39.75 Aligned_cols=40 Identities=15% Similarity=0.120 Sum_probs=35.7
Q ss_pred HHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcC
Q 021440 9 ESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVN 49 (312)
Q Consensus 9 ~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~~ 49 (312)
.++|....+. ||+....|+.-|+.+|||++.||...-..+
T Consensus 10 ~~~Vk~LRe~-TGag~~dcKkAL~e~~GDi~~Ai~~Lr~kg 49 (64)
T 2cp9_A 10 KELLMKLRRK-TGYSFVNCKKALETCGGDLKQAEIWLHKEA 49 (64)
T ss_dssp CHHHHHHHHH-HCCCHHHHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-hCCCHHHHHHHHHHcCCCHHHHHHHHHHHh
Confidence 4689999999 999999999999999999999998876543
No 274
>2dag_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5 (USP 5), UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.20 E-value=0.067 Score=39.86 Aligned_cols=41 Identities=17% Similarity=0.130 Sum_probs=37.2
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcC-CCHHHHHHHHHhcCC
Q 021440 8 KESRISSFLEIAVGASGVTAIECLQATS-WKLDEAILLFFAVNE 50 (312)
Q Consensus 8 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~-wdLe~Av~lff~~~~ 50 (312)
..+.|.+.+++ |-+.+.|++-|.+++ ||+|.|++-.|++.+
T Consensus 9 ~e~~v~~L~~M--GF~~~~a~~AL~~t~n~~ve~A~ewL~~~~~ 50 (74)
T 2dag_A 9 DESVIIQLVEM--GFPMDACRKAVYYTGNSGAEAAMNWVMSHMD 50 (74)
T ss_dssp CHHHHHHHHHH--SCCHHHHHHHHHHHTSCCHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHc--CCCHHHHHHHHHHhCCCCHHHHHHHHHhCCC
Confidence 56789999999 899999999999998 589999999999764
No 275
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=94.11 E-value=0.13 Score=44.08 Aligned_cols=76 Identities=11% Similarity=-0.009 Sum_probs=43.8
Q ss_pred cCCeE-EEEeecCCCcccch--hhcccCCCHHHHHHhhccEE-EEEeccCChhHH---------------------HHHH
Q 021440 135 QDKWL-LVNLQSTKEFSSLM--LNRDTWGNEAVSQIISVNFI-FWQEYDDTSEGW---------------------KVCS 189 (312)
Q Consensus 135 ~~KwL-LVniq~~~~f~c~~--lnRDvw~~~~V~~~i~~nFI-fwq~~~ds~EG~---------------------~~~~ 189 (312)
++||+ |+++-..||+.|.. +.. + ++...+|-..++. ++.++.|+++.. ++++
T Consensus 55 ~Gk~vvL~f~~a~wcp~C~~~e~p~-l--~~~~~~~~~~gv~~vv~Is~d~~~~~~~f~~~~~~~~~fp~l~D~~~~va~ 131 (184)
T 3uma_A 55 KGKRVVLFAVPGAFTPTCSLNHLPG-Y--LENRDAILARGVDDIAVVAVNDLHVMGAWATHSGGMGKIHFLSDWNAAFTK 131 (184)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHH-H--HHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHHTCTTTSEEEECTTCHHHH
T ss_pred CCCCEEEEEEcCCCCCCcCHHHHHH-H--HHHHHHHHHcCCCEEEEEECCCHHHHHHHHHHhCCCCceEEEEcCchHHHH
Confidence 46765 45556999999987 321 1 1112233334566 677776664322 2444
Q ss_pred hcCCC-----------CCCeEEEEeCCCCeeEEEecC
Q 021440 190 FYNMD-----------SIPAVLVIDPITGQKICSWCG 215 (312)
Q Consensus 190 ~Y~~~-----------~~P~i~IIdprTGe~v~~~~G 215 (312)
.|.+. ..|+..||| .|.....|.|
T Consensus 132 ~yGv~~~~~~~g~g~~~~r~tfiId--dG~I~~~~~~ 166 (184)
T 3uma_A 132 AIGMEIDLSAGTLGIRSKRYSMLVE--DGVVKALNIE 166 (184)
T ss_dssp HTTCEEEEGGGTCEEEECCEEEEEE--TTEEEEEEEC
T ss_pred HcCCceeccccCCcccceeEEEEEC--CCEEEEEEEe
Confidence 45542 357788885 6888877754
No 276
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=94.10 E-value=0.14 Score=43.16 Aligned_cols=42 Identities=12% Similarity=0.252 Sum_probs=31.9
Q ss_pred HHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021440 187 VCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (312)
Q Consensus 187 ~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~ 232 (312)
.+..+.+...|+++| .|+.+....|..+.+.|.+.|...+.+
T Consensus 144 ~a~~~gv~gtPt~~v----ng~~~~~~~G~~~~e~l~~~i~~l~~k 185 (192)
T 3h93_A 144 LAMAYQVTGVPTMVV----NGKYRFDIGSAGGPEETLKLADYLIEK 185 (192)
T ss_dssp HHHHHTCCSSSEEEE----TTTEEEEHHHHTSHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCCCeEEE----CCEEEecccccCCHHHHHHHHHHHHHH
Confidence 345677899999976 477765555888999999988887754
No 277
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=93.86 E-value=0.26 Score=43.80 Aligned_cols=96 Identities=15% Similarity=0.129 Sum_probs=65.7
Q ss_pred cCCeEEEEee-cCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHH--------------------------HH
Q 021440 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGW--------------------------KV 187 (312)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~--------------------------~~ 187 (312)
.+||++++++ ..+|+.|..=-..+ ++...+|-+.+..++.++.|+.... ++
T Consensus 51 ~GK~vVL~FyP~d~TpvCt~E~~~f--~~~~~~f~~~g~~vigiS~Ds~~sh~aw~~~~~~~~~~~~l~fpllsD~~~~v 128 (216)
T 3sbc_A 51 KGKYVVLAFIPLAFTFVSPTEIIAF--SEAAKKFEEQGAQVLFASTDSEYSLLAWTNIPRKEGGLGPINIPLLADTNHSL 128 (216)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHH--HHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHH
T ss_pred CCCeEEEEEEcCCCCCcCchhhhHH--HHhHHhhccCCceEEEeecCchhhHHHHHHHHHHhCCccCcccceEeCCCCHH
Confidence 4799999999 78899887644332 3445566677999999999975432 45
Q ss_pred HHhcCC------CCCCeEEEEeCCCCeeEEEecC----CCChHHHHHHHHHH--HhhC
Q 021440 188 CSFYNM------DSIPAVLVIDPITGQKICSWCG----MINPQPLGEMLLPF--MDRS 233 (312)
Q Consensus 188 ~~~Y~~------~~~P~i~IIdprTGe~v~~~~G----~~~~~~fl~~L~~f--l~~~ 233 (312)
+..|.+ -.++.+.|||| .|.....|.- -.+.+++|..|+.+ .+++
T Consensus 129 ak~YGv~~~~~g~~~R~tFiID~-~G~Ir~~~v~~~~~grn~dEiLr~l~AlQ~~~~~ 185 (216)
T 3sbc_A 129 SRDYGVLIEEEGVALRGLFIIDP-KGVIRHITINDLPVGRNVDEALRLVEAFQWTDKN 185 (216)
T ss_dssp HHHHTCEETTTTEECEEEEEECT-TSBEEEEEEECTTBCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCeeccCCceeeEEEEECC-CCeEEEEEEcCCCCCCCHHHHHHHHHHhhhHhhc
Confidence 677776 23688999998 5876554321 13778888777654 3444
No 278
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=93.74 E-value=0.14 Score=36.49 Aligned_cols=43 Identities=16% Similarity=0.160 Sum_probs=37.8
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Q 021440 8 KESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNE 50 (312)
Q Consensus 8 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~~~ 50 (312)
.++.|.++.++=-..|.++.+..|+++++|+|.||+..++...
T Consensus 9 ~ee~l~~L~emFP~ld~~~I~~vL~a~~gdvd~aI~~LL~m~~ 51 (59)
T 1wgl_A 9 SEEDLKAIQDMFPNMDQEVIRSVLEAQRGNKDAAINSLLQMGE 51 (59)
T ss_dssp CHHHHHHHHHHCSSSCHHHHHHHHTTTTTCHHHHHHHHHHSSC
T ss_pred CHHHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHcCcC
Confidence 4567777877778889999999999999999999999999764
No 279
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=93.55 E-value=0.19 Score=36.26 Aligned_cols=74 Identities=9% Similarity=0.043 Sum_probs=45.3
Q ss_pred EEEeecCCCcccchhhcccCCCHHHHHHhh--ccEEEEEeccCChh--HHHHHHhcC--CCCCCeEEEEeCCCCeeEEEe
Q 021440 140 LVNLQSTKEFSSLMLNRDTWGNEAVSQIIS--VNFIFWQEYDDTSE--GWKVCSFYN--MDSIPAVLVIDPITGQKICSW 213 (312)
Q Consensus 140 LVniq~~~~f~c~~lnRDvw~~~~V~~~i~--~nFIfwq~~~ds~E--G~~~~~~Y~--~~~~P~i~IIdprTGe~v~~~ 213 (312)
++.+..+||..|+.+.+- +.++.. .++-|..++++... -..+...|. +.++|+| +++ |+.+
T Consensus 3 v~~f~~~~C~~C~~~~~~------l~~l~~~~~~i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i-~~~---g~~i--- 69 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDL------AEKLSNERDDFQYQYVDIRAEGITKEDLQQKAGKPVETVPQI-FVD---QQHI--- 69 (85)
T ss_dssp EEEECCTTSTHHHHHHHH------HHHHHHHHSSCEEEEECHHHHTCCSHHHHHHTCCCSCCSCEE-EET---TEEE---
T ss_pred EEEEeCCCCCCHHHHHHH------HHHHHhcCCCceEEEEecccChHHHHHHHHHhCCCCceeCeE-EEC---CEEE---
Confidence 566788999999998532 222222 34666666655422 246888888 8999998 444 6654
Q ss_pred cCCCChHHHHHHHHHH
Q 021440 214 CGMINPQPLGEMLLPF 229 (312)
Q Consensus 214 ~G~~~~~~fl~~L~~f 229 (312)
.| .+++.+.+.+.
T Consensus 70 ~~---~~~l~~~~~~~ 82 (85)
T 1ego_A 70 GG---YTDFAAWVKEN 82 (85)
T ss_dssp ES---SHHHHHHHHHH
T ss_pred EC---HHHHHHHHHHh
Confidence 23 24555555443
No 280
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=93.39 E-value=0.24 Score=41.89 Aligned_cols=76 Identities=7% Similarity=-0.208 Sum_probs=42.8
Q ss_pred cCCeEEEEee-cCCCcccch--hhcccCCCHHHHHHhhccEEEEE-eccCChhHH---------------------HHHH
Q 021440 135 QDKWLLVNLQ-STKEFSSLM--LNRDTWGNEAVSQIISVNFIFWQ-EYDDTSEGW---------------------KVCS 189 (312)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~--lnRDvw~~~~V~~~i~~nFIfwq-~~~ds~EG~---------------------~~~~ 189 (312)
.+||++|++. ..||+.|.. |..- .+...+|-..++.++. ++.|+++.. ++++
T Consensus 42 ~gk~vvL~f~pa~wcp~C~~~e~p~l---~~~~~~~~~~gv~vv~~iS~D~~~~~~~f~~~~~~~~~fp~l~D~~~~va~ 118 (173)
T 3mng_A 42 KGKKGVLFGVPGAFTPGCSKTHLPGF---VEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGK 118 (173)
T ss_dssp TTSEEEEEECSCTTCHHHHHTHHHHH---HHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHTTCTTTCEEEECTTCHHHH
T ss_pred CCCcEEEEEEeCCCCCCCCHHHHHHH---HHHHHHHHhCCCEEEEEEcCCCHHHHHHHHHHhCCCCceEEEECCChHHHH
Confidence 4677766555 899999983 4310 1112223334455554 555554322 3445
Q ss_pred hcCCC-------------CCCeEEEEeCCCCeeEEEecC
Q 021440 190 FYNMD-------------SIPAVLVIDPITGQKICSWCG 215 (312)
Q Consensus 190 ~Y~~~-------------~~P~i~IIdprTGe~v~~~~G 215 (312)
.|.+. ..|+..||| .|.....|.+
T Consensus 119 ~yGv~~~~~~~~~~g~~~~~r~tfvID--dG~I~~~~v~ 155 (173)
T 3mng_A 119 ETDLLLDDSLVSIFGNRRLKRFSMVVQ--DGIVKALNVE 155 (173)
T ss_dssp HHTCBCCSTTHHHHSSCCBCCEEEEEE--TTEEEEEEEC
T ss_pred HhCCCcccccccccCCcceEEEEEEEE--CCEEEEEEEe
Confidence 55542 348888888 5887777654
No 281
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.15 E-value=0.19 Score=40.34 Aligned_cols=76 Identities=9% Similarity=0.097 Sum_probs=47.2
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCC--hhH-HHHHHhcCCCCCCeE
Q 021440 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDT--SEG-WKVCSFYNMDSIPAV 199 (312)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds--~EG-~~~~~~Y~~~~~P~i 199 (312)
....+.+..+.+.++ |+| +..+||..|+.+.+ +.+-++-.|..+.++.+. ++. ..+...|.+..+|+|
T Consensus 14 ~~~~~~~~~~i~~~~-vvv-f~~~~Cp~C~~~~~-------~L~~~~i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l 84 (130)
T 2cq9_A 14 TAPVNQIQETISDNC-VVI-FSKTSCSYCTMAKK-------LFHDMNVNYKVVELDLLEYGNQFQDALYKMTGERTVPRI 84 (130)
T ss_dssp CCHHHHHHHHHHHSS-EEE-EECSSCSHHHHHHH-------HHHHHTCCCEEEETTTSTTHHHHHHHHHHHHSSCCSSEE
T ss_pred HHHHHHHHHHHcCCc-EEE-EEcCCChHHHHHHH-------HHHHcCCCcEEEECcCCcCcHHHHHHHHHHhCCCCcCEE
Confidence 445555666666665 444 67789999998843 222234467766665442 222 247788999999998
Q ss_pred EEEeCCCCeeEE
Q 021440 200 LVIDPITGQKIC 211 (312)
Q Consensus 200 ~IIdprTGe~v~ 211 (312)
. ++ |+.+.
T Consensus 85 ~-i~---G~~ig 92 (130)
T 2cq9_A 85 F-VN---GTFIG 92 (130)
T ss_dssp E-ET---TEEEE
T ss_pred E-EC---CEEEc
Confidence 4 44 66543
No 282
>1vek_A UBP14, ubiquitin-specific protease 14, putative; UBA domain, three helix bundle, ubiquitin associated domain, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.5.2.1
Probab=92.83 E-value=0.17 Score=38.63 Aligned_cols=41 Identities=15% Similarity=0.234 Sum_probs=37.1
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHc-CCCHHHHHHHHHhcCC
Q 021440 8 KESRISSFLEIAVGASGVTAIECLQAT-SWKLDEAILLFFAVNE 50 (312)
Q Consensus 8 ~~~~i~~F~~iTt~~~~~~A~~~Le~~-~wdLe~Av~lff~~~~ 50 (312)
..+.|.+.+++ |-+.+.|++.|..+ |||+|.|++-.|++.+
T Consensus 29 ~e~~v~~L~~M--GF~~~~a~~AL~~t~n~n~e~A~ewL~~h~~ 70 (84)
T 1vek_A 29 NEEIVAQLVSM--GFSQLHCQKAAINTSNAGVEEAMNWLLSHMD 70 (84)
T ss_dssp CHHHHHHHHHH--TCCHHHHHHHHHHTTTCCHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHc--CCCHHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 57899999999 99999999999998 5999999999999754
No 283
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=92.72 E-value=0.37 Score=42.93 Aligned_cols=97 Identities=14% Similarity=0.175 Sum_probs=65.0
Q ss_pred cCCeEEEEee-cCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHH--------------------------HH
Q 021440 135 QDKWLLVNLQ-STKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGW--------------------------KV 187 (312)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~--------------------------~~ 187 (312)
.+||++++++ ..+++-|..=-.++ ++...+|-+.+..++.++.|+.... .+
T Consensus 55 ~GK~vVL~FyP~d~TpvCt~E~~~f--~~~~~eF~~~g~~vigiS~Ds~~sh~~w~~~~~~~~~~~~l~fpllsD~~~~v 132 (219)
T 3tue_A 55 KGKWVVLFFYPLDFTFVCPTEVIAF--SDSVSRFNELNCEVLACSIDSEYAHLQWTLQDRKKGGLGTMAIPILADKTKNI 132 (219)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHH--HTTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHH
T ss_pred CCCEEEEEEecccCCCCCchhHhhH--HHHHhhhccCCcEEEEeeCCchhhHHHHhhhhHHhcCccccccccccCcccHH
Confidence 4799999999 67888887654333 3445677778999999999985432 35
Q ss_pred HHhcCC------CCCCeEEEEeCCCCeeEEEecC--C--CChHHHHHHHHHH--HhhCC
Q 021440 188 CSFYNM------DSIPAVLVIDPITGQKICSWCG--M--INPQPLGEMLLPF--MDRSP 234 (312)
Q Consensus 188 ~~~Y~~------~~~P~i~IIdprTGe~v~~~~G--~--~~~~~fl~~L~~f--l~~~~ 234 (312)
++.|.+ -.+-.+.|||| .|...+.|.- . -..+++|..|+.. .+++.
T Consensus 133 a~~yGv~~~~~g~~~R~tFiIDp-~g~Ir~~~~~~~~~gr~~~EvLr~l~aLQ~~~~~~ 190 (219)
T 3tue_A 133 ARSYGVLEESQGVAYRGLFIIDP-HGMLRQITVNDMPVGRSVEEVLRLLEAFQFVEKHG 190 (219)
T ss_dssp HHHTTCEETTTTEECEEEEEECT-TSBEEEEEEECTTCCCCHHHHHHHHHHHHHHHHC-
T ss_pred HHHcCCcccCCCeeEEEEEEECC-CCeEEEEEEecCCCCCCHHHHHHHHHHhhhHHhcC
Confidence 666766 12457889998 5876655521 1 3678888777544 34443
No 284
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=92.02 E-value=0.47 Score=39.95 Aligned_cols=22 Identities=5% Similarity=-0.062 Sum_probs=18.4
Q ss_pred cCCeEEEEeecCCCcccchhhc
Q 021440 135 QDKWLLVNLQSTKEFSSLMLNR 156 (312)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnR 156 (312)
.+|..+|.+.+.||..|..+..
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~ 45 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEP 45 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHH
T ss_pred CCCeEEEEEECCCCccHHHhhH
Confidence 4678899999999999998864
No 285
>2lbc_A Ubiquitin carboxyl-terminal hydrolase 13; tandem UBA of USP13; NMR {Homo sapiens}
Probab=91.27 E-value=0.27 Score=39.86 Aligned_cols=41 Identities=27% Similarity=0.338 Sum_probs=37.3
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Q 021440 8 KESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNE 50 (312)
Q Consensus 8 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~~~ 50 (312)
..+.|.+.+++ |-+.+.|++-|.+++||++.|++..|.+.+
T Consensus 78 ~e~~v~~L~~M--GF~~~~a~~AL~~~~~~~e~A~e~L~~~~~ 118 (126)
T 2lbc_A 78 PEEIVAIITSM--GFQRNQAIQALRATNNNLERALDWIFSHPE 118 (126)
T ss_dssp CHHHHHHHHHH--TSCHHHHHHHHHHHTSCHHHHHHHHHTCCS
T ss_pred CHHHHHHHHHc--CCCHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 56789999999 899999999999999999999999998654
No 286
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=91.09 E-value=0.61 Score=38.90 Aligned_cols=54 Identities=4% Similarity=-0.165 Sum_probs=32.2
Q ss_pred CeEEEEeecCCCcccch--hhcccCCCHHHHHHhhccEE-EEEeccCChh-HHHHHHhcCC
Q 021440 137 KWLLVNLQSTKEFSSLM--LNRDTWGNEAVSQIISVNFI-FWQEYDDTSE-GWKVCSFYNM 193 (312)
Q Consensus 137 KwLLVniq~~~~f~c~~--lnRDvw~~~~V~~~i~~nFI-fwq~~~ds~E-G~~~~~~Y~~ 193 (312)
+.||+++..+||..|.. |. .+ ++...+|-..++. ++.++.++++ ..++++.+.+
T Consensus 45 ~vvl~~~~a~wcp~C~~eh~p-~l--~~~~~~~~~~g~~~vv~Is~d~~~~~~~~~~~~~~ 102 (171)
T 2pwj_A 45 KVVIFGLPGAYTGVCSSKHVP-PY--KHNIDKFKAKGVDSVICVAINDPYTVNAWAEKIQA 102 (171)
T ss_dssp EEEEEECSCTTCTTHHHHTHH-HH--HHTHHHHHHTTCSEEEEEESSCHHHHHHHHHHTTC
T ss_pred CEEEEEecCCCCCCCCHHHHH-HH--HHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHHhCC
Confidence 46788999999999986 32 11 1122334345677 7777777654 2345554443
No 287
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=91.04 E-value=0.49 Score=41.46 Aligned_cols=93 Identities=8% Similarity=0.052 Sum_probs=55.2
Q ss_pred cCC-eEEEEe-ecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhH--------------------------HH
Q 021440 135 QDK-WLLVNL-QSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEG--------------------------WK 186 (312)
Q Consensus 135 ~~K-wLLVni-q~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG--------------------------~~ 186 (312)
.+| |+++.+ -.+||+.|..--..+ .....+|=+.++.++.++.|+.+. ..
T Consensus 29 ~Gk~~vvL~f~~a~~cp~C~~el~~l--~~l~~~f~~~~v~vi~vS~D~~~~~~~~~~~i~~~~~~~~~~fpil~D~~~~ 106 (220)
T 1xcc_A 29 IENSWAILFSHPNDFTPVCTTELAEL--GKMHEDFLKLNCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESRE 106 (220)
T ss_dssp TTTSEEEEECCSCTTCHHHHHHHHHH--HHTHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHHTCSCCCCCEEECTTSH
T ss_pred cCCCeEEEEEECCCCCCCCHHHHHHH--HHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHHHhcCCCCcceeEECchhH
Confidence 344 766665 578999997532211 111222333467777777766432 12
Q ss_pred HHHhcCCC------------CCCeEEEEeCCCCeeEEEecCC----CChHHHHHHHHHHH
Q 021440 187 VCSFYNMD------------SIPAVLVIDPITGQKICSWCGM----INPQPLGEMLLPFM 230 (312)
Q Consensus 187 ~~~~Y~~~------------~~P~i~IIdprTGe~v~~~~G~----~~~~~fl~~L~~fl 230 (312)
++..|.+. ..|++.|||| .|.....+.|. .+.++++..|....
T Consensus 107 va~~ygv~~~~~~~~~g~~~~~p~~flID~-~G~I~~~~~~~~~~g~~~~ell~~i~~lq 165 (220)
T 1xcc_A 107 LANKLKIMDEQEKDITGLPLTCRCLFFISP-EKKIKATVLYPATTGRNAHEILRVLKSLQ 165 (220)
T ss_dssp HHHHHTCEEEEEECTTSCEEECEEEEEECT-TSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHHhCCCCcccccCCCCCcccceEEEECC-CCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 44555551 3689999997 58887776442 36778877776654
No 288
>2crn_A Ubash3A protein; compact three-helix bundle, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=90.76 E-value=0.36 Score=34.86 Aligned_cols=41 Identities=24% Similarity=0.286 Sum_probs=36.3
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCC-CHHHHHHHHHhcCC
Q 021440 8 KESRISSFLEIAVGASGVTAIECLQATSW-KLDEAILLFFAVNE 50 (312)
Q Consensus 8 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~w-dLe~Av~lff~~~~ 50 (312)
..+.|.+.+++ |=+.+.|++-|..+++ |+|.|++-.|++.+
T Consensus 9 ~e~~v~~L~~M--GF~~~~a~~AL~~t~n~~~e~A~~wL~~h~~ 50 (64)
T 2crn_A 9 SPSLLEPLLAM--GFPVHTALKALAATGRKTAEEALAWLHDHCN 50 (64)
T ss_dssp SCSSHHHHHHT--SCCHHHHHHHHHHHTSCCHHHHHHHHHHHSS
T ss_pred CHHHHHHHHHc--CCCHHHHHHHHHHhCCCCHHHHHHHHHhCCC
Confidence 44578999998 8999999999999976 99999999999765
No 289
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=90.74 E-value=0.35 Score=40.36 Aligned_cols=56 Identities=11% Similarity=-0.256 Sum_probs=32.1
Q ss_pred cCCeEEEEee-cCCCcccch-hhcccCCCHHHHHHhhccE-EEEEeccCChhH-HHHHHhcC
Q 021440 135 QDKWLLVNLQ-STKEFSSLM-LNRDTWGNEAVSQIISVNF-IFWQEYDDTSEG-WKVCSFYN 192 (312)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~~-lnRDvw~~~~V~~~i~~nF-Ifwq~~~ds~EG-~~~~~~Y~ 192 (312)
++||++|++. .+||..|.. --..+ ++...+|-..++ .++.++.|+++. .++++.+.
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l--~~~~~~~~~~gv~~vv~Is~d~~~~~~~~~~~~~ 89 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGY--VEQAAAIHGKGVDIIACMAVNDSFVMDAWGKAHG 89 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHH--HHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHTT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHH--HHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcC
Confidence 5789999886 899999987 11111 011223334466 677777666542 23444433
No 290
>4ae4_A Ubiquitin-associated protein 1; protein transport, endosomal sorting, tetherin, VPU, HIV-1, monoubiquitin; HET: NHE; 1.65A {Homo sapiens} PDB: 4ae4_B*
Probab=90.44 E-value=0.36 Score=39.05 Aligned_cols=39 Identities=23% Similarity=0.147 Sum_probs=35.3
Q ss_pred HHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Q 021440 10 SRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNE 50 (312)
Q Consensus 10 ~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~~~ 50 (312)
+.|.+|+++ |=+.+.|+.-|..+++|++.|+...|...+
T Consensus 78 ~~v~~L~eM--GF~~~~a~~AL~~~~nd~erAlewL~~~~~ 116 (118)
T 4ae4_A 78 QLMSKFKEM--GFELKDIKEVLLLHNNDQDNALEDLMARAG 116 (118)
T ss_dssp HHHHHHHHT--TCCHHHHHHHHHHTTTCHHHHHHHHHHHC-
T ss_pred HHHHHHHHc--CCCHHHHHHHHHHcCCCHHHHHHHHHHhcc
Confidence 569999999 899999999999999999999999987643
No 291
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=90.29 E-value=0.051 Score=45.23 Aligned_cols=45 Identities=11% Similarity=0.181 Sum_probs=34.0
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhCC
Q 021440 184 GWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRSP 234 (312)
Q Consensus 184 G~~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~~~ 234 (312)
..++++.|.+...|+++|- .|+. +.|+.+++.|.+.|.+.+.++-
T Consensus 98 ~~~la~~~gI~gtPt~vi~---nG~~---i~G~~~~~~l~~~i~~~~~~~~ 142 (147)
T 3gv1_A 98 TTSLGEQFGFNGTPTLVFP---NGRT---QSGYSPMPQLEEIIRKNQQEGH 142 (147)
T ss_dssp HHHHHHHTTCCSSCEEECT---TSCE---EESCCCTTHHHHHHHHTSCC--
T ss_pred HHHHHHHhCCCccCEEEEE---CCEE---eeCCCCHHHHHHHHHHHHHhcc
Confidence 4466788889999999983 3653 6799999999988888776653
No 292
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=90.04 E-value=1.7 Score=35.57 Aligned_cols=63 Identities=16% Similarity=0.222 Sum_probs=42.4
Q ss_pred hccEEEEEeccCChhHHHHHHhcCCC--CCCeEEEEeC-CCCeeEEEec-CCCChHHHHHHHHHHHhh
Q 021440 169 SVNFIFWQEYDDTSEGWKVCSFYNMD--SIPAVLVIDP-ITGQKICSWC-GMINPQPLGEMLLPFMDR 232 (312)
Q Consensus 169 ~~nFIfwq~~~ds~EG~~~~~~Y~~~--~~P~i~IIdp-rTGe~v~~~~-G~~~~~~fl~~L~~fl~~ 232 (312)
+..++|.-++.+..+..+.+.++++. .+|.|+|++. ..|.+- ... |.++++.+.+-+..|++.
T Consensus 62 kgki~Fv~vd~~~~~~~~~l~~fGl~~~~~P~v~i~~~~~~~~Ky-~~~~~~~t~~~i~~Fv~d~l~G 128 (147)
T 3bj5_A 62 KGKILFAFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMTKY-KPESEELTAERITEFCHRFLEG 128 (147)
T ss_dssp TTTCEEEEECTTCGGGHHHHHHTTCCGGGCSEEEEEECSSSCEEE-CCSCCCCCHHHHHHHHHHHHTT
T ss_pred CCceEEEEEecchHhHHHHHHHcCCCcccCCEEEEEecccccccC-CCCcccCCHHHHHHHHHHHHcC
Confidence 34577777776546666788899996 4999999995 334432 233 667887766666666654
No 293
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=89.35 E-value=1.3 Score=33.92 Aligned_cols=75 Identities=13% Similarity=0.164 Sum_probs=45.7
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhH---HH-HHHhcCCCCCCe
Q 021440 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEG---WK-VCSFYNMDSIPA 198 (312)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG---~~-~~~~Y~~~~~P~ 198 (312)
..+.+.++...+.++ +|.+..+||..|+.+.+ +.+-++-.|...-++.+.+++ .. +...+...++|.
T Consensus 6 ~~~~~~~~~~i~~~~--v~vy~~~~Cp~C~~~~~-------~L~~~~i~~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~ 76 (113)
T 3rhb_A 6 SRMEESIRKTVTENT--VVIYSKTWCSYCTEVKT-------LFKRLGVQPLVVELDQLGPQGPQLQKVLERLTGQHTVPN 76 (113)
T ss_dssp CHHHHHHHHHHHHSS--EEEEECTTCHHHHHHHH-------HHHHTTCCCEEEEGGGSTTHHHHHHHHHHHHHSCCSSCE
T ss_pred HHHHHHHHHHHhcCC--EEEEECCCChhHHHHHH-------HHHHcCCCCeEEEeecCCCChHHHHHHHHHHhCCCCcCE
Confidence 346666777777777 44466789999997732 112223346666665542233 33 455678899999
Q ss_pred EEEEeCCCCeeE
Q 021440 199 VLVIDPITGQKI 210 (312)
Q Consensus 199 i~IIdprTGe~v 210 (312)
|. |+ |+.+
T Consensus 77 if-i~---g~~i 84 (113)
T 3rhb_A 77 VF-VC---GKHI 84 (113)
T ss_dssp EE-ET---TEEE
T ss_pred EE-EC---CEEE
Confidence 94 54 6654
No 294
>2lva_A Ubiquitin carboxyl-terminal hydrolase 28; UIM, ubiquitin interacting motif, UBA domain, NESG, northeas structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=88.91 E-value=0.07 Score=43.53 Aligned_cols=42 Identities=17% Similarity=0.112 Sum_probs=37.7
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcC
Q 021440 8 KESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVN 49 (312)
Q Consensus 8 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~~ 49 (312)
.+-+|.|.-+||+..|...=.+.|++++|||+.||.++-+..
T Consensus 18 ~Q~lLNQLrEITGIqD~~~L~~ALkAsnGdl~qAV~~LT~~~ 59 (129)
T 2lva_A 18 GQMLLNQLREITGIQDPSFLHEALKASNGDITQAVSLLTDER 59 (129)
Confidence 455899999998888999999999999999999999997764
No 295
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=89.30 E-value=2.3 Score=29.96 Aligned_cols=75 Identities=13% Similarity=0.046 Sum_probs=44.4
Q ss_pred EEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChH
Q 021440 141 VNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQ 220 (312)
Q Consensus 141 Vniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~ 220 (312)
+.+..++|..|+.+.+- .+-.+-.|...-++.+......+...|....+|++. +| |+.+ .|+
T Consensus 4 ~~y~~~~C~~C~~~~~~-------l~~~~i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l~-~~---g~~i---~g~---- 65 (82)
T 1fov_A 4 EIYTKETCPYCHRAKAL-------LSSKGVSFQELPIDGNAAKREEMIKRSGRTTVPQIF-ID---AQHI---GGY---- 65 (82)
T ss_dssp EEEECSSCHHHHHHHHH-------HHHHTCCCEEEECTTCSHHHHHHHHHHSSCCSCEEE-ET---TEEE---ESH----
T ss_pred EEEECCCChhHHHHHHH-------HHHCCCCcEEEECCCCHHHHHHHHHHhCCCCcCEEE-EC---CEEE---eCH----
Confidence 34567899999977421 111233466555544333344678889999999984 44 6643 332
Q ss_pred HHHHHHHHHHhhCCCC
Q 021440 221 PLGEMLLPFMDRSPRK 236 (312)
Q Consensus 221 ~fl~~L~~fl~~~~~~ 236 (312)
..+.++++.+.+.
T Consensus 66 ---~~i~~~~~~g~l~ 78 (82)
T 1fov_A 66 ---DDLYALDARGGLD 78 (82)
T ss_dssp ---HHHHHHHHTTCSH
T ss_pred ---HHHHHHHHCCCHH
Confidence 2355666666654
No 296
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=89.06 E-value=2.8 Score=34.85 Aligned_cols=41 Identities=17% Similarity=0.171 Sum_probs=29.7
Q ss_pred HHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021440 186 KVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (312)
Q Consensus 186 ~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~ 232 (312)
+++..+.+...|++ ||+ |+.+ +.|..++++|.+.|...+.+
T Consensus 141 ~~a~~~gv~gtPt~-vin---g~~~--~~g~~~~~~l~~~i~~~l~~ 181 (195)
T 2znm_A 141 KLTEQYRIDSTPTV-IVG---GKYR--VIFNNGFDGGVHTIKELVAK 181 (195)
T ss_dssp HHHHHTTCCSSSEE-EET---TTEE--ECCCSHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCeE-EEC---CEEE--EcCCCCHHHHHHHHHHHHHH
Confidence 34567788999995 455 5543 46777888988888888765
No 297
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=88.21 E-value=1.2 Score=36.73 Aligned_cols=72 Identities=10% Similarity=0.129 Sum_probs=44.3
Q ss_pred HHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCC--hhH-HHHHHhcCCCCCCeEEEE
Q 021440 126 EKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDT--SEG-WKVCSFYNMDSIPAVLVI 202 (312)
Q Consensus 126 ~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds--~EG-~~~~~~Y~~~~~P~i~II 202 (312)
.+.+..+.+.++ |+| +..+||..|+.+.+ +.+-++-.|..+.++.+. ++. ..+...|.+..+|+|. +
T Consensus 39 ~~~~~~~i~~~~-Vvv-f~~~~Cp~C~~~k~-------~L~~~~i~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~if-i 108 (146)
T 2ht9_A 39 VNQIQETISDNC-VVI-FSKTSCSYCTMAKK-------LFHDMNVNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF-V 108 (146)
T ss_dssp HHHHHHHHHHCS-EEE-EECTTCHHHHHHHH-------HHHHHTCCCEEEEGGGCTTHHHHHHHHHHHHSCCCSCEEE-E
T ss_pred HHHHHHHhcCCC-EEE-EECCCChhHHHHHH-------HHHHcCCCeEEEECccCcCCHHHHHHHHHHhCCCCcCeEE-E
Confidence 444455555555 444 67889999998743 222234467666665542 222 2477889999999984 4
Q ss_pred eCCCCeeE
Q 021440 203 DPITGQKI 210 (312)
Q Consensus 203 dprTGe~v 210 (312)
+ |+.+
T Consensus 109 ~---G~~i 113 (146)
T 2ht9_A 109 N---GTFI 113 (146)
T ss_dssp T---TEEE
T ss_pred C---CEEE
Confidence 4 6644
No 298
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=87.89 E-value=2.6 Score=30.66 Aligned_cols=70 Identities=19% Similarity=0.060 Sum_probs=44.0
Q ss_pred EeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChh-H----HHHHHhcCCCCCCeEEEEeCCCCeeEEEecCC
Q 021440 142 NLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSE-G----WKVCSFYNMDSIPAVLVIDPITGQKICSWCGM 216 (312)
Q Consensus 142 niq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~E-G----~~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~ 216 (312)
-+..++|..|+++.+ +.+-++-.|.+..++....+ . ..+...|.....|.|.+ + |+. +.|+
T Consensus 16 ly~~~~Cp~C~~~~~-------~L~~~gi~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~-~---g~~---i~G~ 81 (92)
T 3ic4_A 16 MYGLSTCPHCKRTLE-------FLKREGVDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK-G---DKH---VLGY 81 (92)
T ss_dssp EEECTTCHHHHHHHH-------HHHHHTCCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE-T---TEE---EESC
T ss_pred EEECCCChHHHHHHH-------HHHHcCCCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE-C---CEE---EeCC
Confidence 345679999988632 22223445766666543332 2 56777888899999986 3 543 4565
Q ss_pred CChHHHHHHH
Q 021440 217 INPQPLGEML 226 (312)
Q Consensus 217 ~~~~~fl~~L 226 (312)
+++++.+.|
T Consensus 82 -~~~~l~~~l 90 (92)
T 3ic4_A 82 -NEEKLKELI 90 (92)
T ss_dssp -CHHHHHHHH
T ss_pred -CHHHHHHHh
Confidence 777766554
No 299
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=87.51 E-value=1.3 Score=33.11 Aligned_cols=60 Identities=12% Similarity=0.061 Sum_probs=37.9
Q ss_pred EEEeecCCCcccchhhcccCCCHHHHHHhhcc---EEEEEeccCC--hhHH-HHHHhcCCCCCCeEEEEeCCCCeeE
Q 021440 140 LVNLQSTKEFSSLMLNRDTWGNEAVSQIISVN---FIFWQEYDDT--SEGW-KVCSFYNMDSIPAVLVIDPITGQKI 210 (312)
Q Consensus 140 LVniq~~~~f~c~~lnRDvw~~~~V~~~i~~n---FIfwq~~~ds--~EG~-~~~~~Y~~~~~P~i~IIdprTGe~v 210 (312)
++.+..+||..|+.+.+ +.+-+... |.+.-++.+. ++.. .+...|.+.++|+|. ++ |+.+
T Consensus 14 v~~f~~~~C~~C~~~~~-------~L~~~~~~~~~~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i~-~~---g~~i 79 (105)
T 1kte_A 14 VVVFIKPTCPFCRKTQE-------LLSQLPFKEGLLEFVDITATSDTNEIQDYLQQLTGARTVPRVF-IG---KECI 79 (105)
T ss_dssp EEEEECSSCHHHHHHHH-------HHHHSCBCTTSEEEEEGGGSTTHHHHHHHHHHHHSCCCSCEEE-ET---TEEE
T ss_pred EEEEEcCCCHhHHHHHH-------HHHHcCCCCCccEEEEccCCCCHHHHHHHHHHHhCCCCcCeEE-EC---CEEE
Confidence 44467889999998743 12222334 7777665543 2332 467789999999984 44 6654
No 300
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=87.35 E-value=1.1 Score=35.28 Aligned_cols=78 Identities=14% Similarity=0.161 Sum_probs=47.1
Q ss_pred cccccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc------cEEEEEeccCCh--hH-HHHH
Q 021440 118 HVMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV------NFIFWQEYDDTS--EG-WKVC 188 (312)
Q Consensus 118 ~l~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~------nFIfwq~~~ds~--EG-~~~~ 188 (312)
..|......+.+..+.+..+ +|.+..+||..|+.+ ++.++++ .|..+-++.+.. +. ..+.
T Consensus 7 ~~~~~~~~~~~~~~~i~~~~--Vvvf~~~~Cp~C~~a---------lk~~L~~~~~~~i~~~~vdid~~~~~~~~~~~l~ 75 (118)
T 3c1r_A 7 HHMVSQETIKHVKDLIAENE--IFVASKTYCPYCHAA---------LNTLFEKLKVPRSKVLVLQLNDMKEGADIQAALY 75 (118)
T ss_dssp -CCSCHHHHHHHHHHHHHSS--EEEEECSSCHHHHHH---------HHHHHTTSCCCGGGEEEEEGGGSTTHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHHccCc--EEEEEcCCCcCHHHH---------HHHHHHHcCCCCCCeEEEECccCCChHHHHHHHH
Confidence 34556666666776666666 333667899999987 2334432 344444443321 12 3477
Q ss_pred HhcCCCCCCeEEEEeCCCCeeE
Q 021440 189 SFYNMDSIPAVLVIDPITGQKI 210 (312)
Q Consensus 189 ~~Y~~~~~P~i~IIdprTGe~v 210 (312)
..|...++|.| +|+ |+.+
T Consensus 76 ~~~g~~tvP~v-fi~---g~~i 93 (118)
T 3c1r_A 76 EINGQRTVPNI-YIN---GKHI 93 (118)
T ss_dssp HHHSCCSSCEE-EET---TEEE
T ss_pred HHhCCCCcCEE-EEC---CEEE
Confidence 78899999988 454 6654
No 301
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=87.08 E-value=2.6 Score=31.98 Aligned_cols=70 Identities=13% Similarity=0.118 Sum_probs=43.1
Q ss_pred ecCCCcccchhhcccCCCHHHHHHhhccEE-EEEeccC-ChhHHHHHHhc--CCCCCCeEEEEeCCCCeeEEEecCCCCh
Q 021440 144 QSTKEFSSLMLNRDTWGNEAVSQIISVNFI-FWQEYDD-TSEGWKVCSFY--NMDSIPAVLVIDPITGQKICSWCGMINP 219 (312)
Q Consensus 144 q~~~~f~c~~lnRDvw~~~~V~~~i~~nFI-fwq~~~d-s~EG~~~~~~Y--~~~~~P~i~IIdprTGe~v~~~~G~~~~ 219 (312)
..+||..|.+. +++++++=| |-.++++ ++++.+..... ...+.|.|.|-| |..+ .| .++
T Consensus 10 s~~~Cp~C~~a----------K~~L~~~gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~i~D---g~~l---~~-~~~ 72 (92)
T 2lqo_A 10 TTSWCGYCLRL----------KTALTANRIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVKFAD---GSTL---TN-PSA 72 (92)
T ss_dssp ECTTCSSHHHH----------HHHHHHTTCCCEEEETTTCHHHHHHHHHHSSSSSCSCEEEETT---SCEE---ES-CCH
T ss_pred cCCCCHhHHHH----------HHHHHhcCCceEEEEcCCCHHHHHHHHHHcCCCCEeCEEEEeC---CEEE---eC-CCH
Confidence 35799999887 567766522 2334444 35555544332 457899998766 4433 33 467
Q ss_pred HHHHHHHHHHH
Q 021440 220 QPLGEMLLPFM 230 (312)
Q Consensus 220 ~~fl~~L~~fl 230 (312)
+++.+.|.+..
T Consensus 73 ~el~~~L~el~ 83 (92)
T 2lqo_A 73 DEVKAKLVKIA 83 (92)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 77777776653
No 302
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=87.00 E-value=3.9 Score=28.13 Aligned_cols=70 Identities=13% Similarity=0.203 Sum_probs=39.6
Q ss_pred EEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCCh
Q 021440 140 LVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINP 219 (312)
Q Consensus 140 LVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~ 219 (312)
++.+..+||..|+.+..- .+-++-.|....++. .++.......|.+..+|++.+ + |+. +.|+ ++
T Consensus 3 i~~y~~~~C~~C~~~~~~-------l~~~~i~~~~~di~~-~~~~~~~~~~~~~~~vP~l~~-~---g~~---~~g~-~~ 66 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKA-------LDRAGLAYNTVDISL-DDEARDYVMALGYVQAPVVEV-D---GEH---WSGF-RP 66 (75)
T ss_dssp EEEEECTTCHHHHHHHHH-------HHHTTCCCEEEETTT-CHHHHHHHHHTTCBCCCEEEE-T---TEE---EESC-CH
T ss_pred EEEEeCCCChHHHHHHHH-------HHHcCCCcEEEECCC-CHHHHHHHHHcCCCccCEEEE-C---CeE---EcCC-CH
Confidence 345677899999986321 111222355544332 234344445789999999873 3 553 4564 56
Q ss_pred HHHHHH
Q 021440 220 QPLGEM 225 (312)
Q Consensus 220 ~~fl~~ 225 (312)
+++.+.
T Consensus 67 ~~l~~~ 72 (75)
T 1r7h_A 67 ERIKQL 72 (75)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 654433
No 303
>2juj_A E3 ubiquitin-protein ligase CBL; alpha helix, UBA domain, calcium, cytoplasm, metal- binding, phosphorylation, proto-oncogene, SH2 domain; NMR {Homo sapiens}
Probab=86.29 E-value=1.4 Score=30.94 Aligned_cols=44 Identities=16% Similarity=0.076 Sum_probs=38.8
Q ss_pred chhhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Q 021440 5 SIDKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNE 50 (312)
Q Consensus 5 s~~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~~~ 50 (312)
+..-++.|.+.|++ |-|.+.|++-|..++.|++.|.+...+-..
T Consensus 4 ~~p~e~~Ia~L~sm--Gfsr~da~~AL~ia~Ndv~~AtNiLlEf~~ 47 (56)
T 2juj_A 4 SPQLSSEIENLMSQ--GYSYQDIQKALVIAQNNIEMAKNILREFVS 47 (56)
T ss_dssp CHHHHHHHHHHHTT--TCCHHHHHHHHHHTTTCSHHHHHHHHHSCC
T ss_pred CCCChHHHHHHHHc--CCCHHHHHHHHHHhcccHHHHHHHHHHHHc
Confidence 34457799999999 999999999999999999999999988653
No 304
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=86.17 E-value=2.7 Score=31.89 Aligned_cols=67 Identities=10% Similarity=0.186 Sum_probs=39.9
Q ss_pred HHHHHHcCCeEEEEeec----CCCcccchhhcccCCCHHHHHHhhc---cEEEEEeccCChhHHHHHHhcCCCCCCeEEE
Q 021440 129 KDAALAQDKWLLVNLQS----TKEFSSLMLNRDTWGNEAVSQIISV---NFIFWQEYDDTSEGWKVCSFYNMDSIPAVLV 201 (312)
Q Consensus 129 ~~~Ak~~~KwLLVniq~----~~~f~c~~lnRDvw~~~~V~~~i~~---nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~I 201 (312)
+....+.++ |+||..+ +||..|+.+. .++++ .|...-++.+..-...+...+....+|.|.
T Consensus 10 ~~~~i~~~~-vvvf~~g~~~~~~C~~C~~~~----------~~L~~~~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~v~- 77 (105)
T 2yan_A 10 LKVLTNKAS-VMLFMKGNKQEAKCGFSKQIL----------EILNSTGVEYETFDILEDEEVRQGLKAYSNWPTYPQLY- 77 (105)
T ss_dssp HHHHHTSSS-EEEEESBCSSSBCTTHHHHHH----------HHHHHHTCCCEEEEGGGCHHHHHHHHHHHTCCSSCEEE-
T ss_pred HHHHhccCC-EEEEEecCCCCCCCccHHHHH----------HHHHHCCCCeEEEECCCCHHHHHHHHHHHCCCCCCeEE-
Confidence 344444555 6666552 7999999864 33333 455554444322223466778889999984
Q ss_pred EeCCCCeeE
Q 021440 202 IDPITGQKI 210 (312)
Q Consensus 202 IdprTGe~v 210 (312)
|+ |+.+
T Consensus 78 i~---g~~i 83 (105)
T 2yan_A 78 VK---GELV 83 (105)
T ss_dssp ET---TEEE
T ss_pred EC---CEEE
Confidence 44 6654
No 305
>2dhy_A CUE domain-containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=85.77 E-value=1.2 Score=32.52 Aligned_cols=43 Identities=16% Similarity=0.108 Sum_probs=37.9
Q ss_pred hhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcC
Q 021440 7 DKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVN 49 (312)
Q Consensus 7 ~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~~ 49 (312)
+..+.+.++.++=-..|.++-+..|++++||++.||+..+...
T Consensus 17 ~~~~~v~~L~~MFP~lD~~vI~~vL~a~~G~vd~aId~LL~ms 59 (67)
T 2dhy_A 17 EFNQAMDDFKTMFPNMDYDIIECVLRANSGAVDATIDQLLQMN 59 (67)
T ss_dssp CSHHHHHHHHHHCSSSCHHHHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHhcC
Confidence 3567888888887888999999999999999999999998864
No 306
>4ae4_A Ubiquitin-associated protein 1; protein transport, endosomal sorting, tetherin, VPU, HIV-1, monoubiquitin; HET: NHE; 1.65A {Homo sapiens} PDB: 4ae4_B*
Probab=85.61 E-value=1.4 Score=35.61 Aligned_cols=45 Identities=13% Similarity=0.235 Sum_probs=41.5
Q ss_pred CCchhhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcC
Q 021440 3 SESIDKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVN 49 (312)
Q Consensus 3 ~~s~~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~~ 49 (312)
.++..+.+.|.+++++ |=+...|++-|..++.|.+.|++-.|.+.
T Consensus 3 ~l~~~e~~~v~~l~~M--GFp~~~~~kAl~~~g~~~e~amewL~~h~ 47 (118)
T 4ae4_A 3 HMSPSERQCVETVVNM--GYSYECVLRAMKAAGANIEQILDYLFAHG 47 (118)
T ss_dssp CSCHHHHHHHHHHHHT--TCCHHHHHHHHHHHCSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHc--CCCHHHHHHHHHHHCcCHHHHHHHHHHhc
Confidence 4678899999999999 99999999999999999999999999864
No 307
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=84.19 E-value=2 Score=33.18 Aligned_cols=60 Identities=7% Similarity=-0.096 Sum_probs=37.3
Q ss_pred EEEeecCCCcccchhhcccCCCHHHHHHhhcc---EEEEEeccCC--hhH-HHHHHhcCCCCCCeEEEEeCCCCeeE
Q 021440 140 LVNLQSTKEFSSLMLNRDTWGNEAVSQIISVN---FIFWQEYDDT--SEG-WKVCSFYNMDSIPAVLVIDPITGQKI 210 (312)
Q Consensus 140 LVniq~~~~f~c~~lnRDvw~~~~V~~~i~~n---FIfwq~~~ds--~EG-~~~~~~Y~~~~~P~i~IIdprTGe~v 210 (312)
+|.+..+||..|+.+.+-+ .. +... |..+-++.+. .+. ..+...|.+.++|.|. ++ |+.+
T Consensus 21 vv~f~~~~Cp~C~~~~~~L-~~------~~~~~~~~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~-i~---g~~i 86 (114)
T 2hze_A 21 VTIFVKYTCPFCRNALDIL-NK------FSFKRGAYEIVDIKEFKPENELRDYFEQITGGKTVPRIF-FG---KTSI 86 (114)
T ss_dssp EEEEECTTCHHHHHHHHHH-TT------SCBCTTSEEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEE-ET---TEEE
T ss_pred EEEEEeCCChhHHHHHHHH-HH------cCCCcCceEEEEccCCCChHHHHHHHHHHhCCCCcCEEE-EC---CEEE
Confidence 4556788999999875321 11 1123 7666655443 122 3577889999999874 44 6654
No 308
>2oo9_A E3 ubiquitin-protein ligase CBL; alpha-helical domain, homodimer; 2.10A {Homo sapiens}
Probab=83.28 E-value=2.5 Score=28.52 Aligned_cols=39 Identities=15% Similarity=0.098 Sum_probs=34.6
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhc
Q 021440 8 KESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAV 48 (312)
Q Consensus 8 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~ 48 (312)
-++.|...|+. |-|.+.|++-|..++.|+|.|.+...+.
T Consensus 4 ~e~~I~~L~s~--Gf~~~~~~rAL~ia~Nnie~A~nIL~ef 42 (46)
T 2oo9_A 4 LSSEIENLMSQ--GYSYQDIQKALVIAQNNIEMAKNILREF 42 (46)
T ss_dssp HHHHHHHHHHT--TBCHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHc--CCCHHHHHHHHHHhhccHHHHHHHHHHh
Confidence 35689999998 9999999999999999999999887654
No 309
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=81.88 E-value=3.4 Score=29.11 Aligned_cols=65 Identities=14% Similarity=0.223 Sum_probs=38.2
Q ss_pred EEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCC-hhHHHHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCC
Q 021440 140 LVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDT-SEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMIN 218 (312)
Q Consensus 140 LVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds-~EG~~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~ 218 (312)
++.+..+||..|+.+.+-+ +-.+-.|.. ++++. ++.......|.+..+|++ +++ |+. +.| .+
T Consensus 3 v~~f~~~~C~~C~~~~~~l-------~~~~i~~~~--vdi~~~~~~~~~~~~~g~~~vP~~-~~~---g~~---~~g-~~ 65 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAM-------ENRGFDFEM--INVDRVPEAAEALRAQGFRQLPVV-IAG---DLS---WSG-FR 65 (81)
T ss_dssp EEEEECTTCHHHHHHHHHH-------HHTTCCCEE--EETTTCHHHHHHHHHTTCCSSCEE-EET---TEE---EES-CC
T ss_pred EEEEcCCCChhHHHHHHHH-------HHCCCCeEE--EECCCCHHHHHHHHHhCCCccCEE-EEC---CEE---Eec-CC
Confidence 4557788999999874321 112223544 45553 455555556899999998 444 553 345 35
Q ss_pred hHH
Q 021440 219 PQP 221 (312)
Q Consensus 219 ~~~ 221 (312)
+++
T Consensus 66 ~~~ 68 (81)
T 1h75_A 66 PDM 68 (81)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 310
>1tr8_A Conserved protein (MTH177); chaperones, nascent polypeptide-associated complex, ribosome domain, ubiquitin, chaperone; 2.27A {Methanothermobacter marburgensis}
Probab=81.80 E-value=1.5 Score=34.58 Aligned_cols=34 Identities=38% Similarity=0.407 Sum_probs=29.5
Q ss_pred HHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHH
Q 021440 9 ESRISSFLEIAVGASGVTAIECLQATSWKLDEAIL 43 (312)
Q Consensus 9 ~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~ 43 (312)
.+.|.-.|+= +|++.+.|++-|+.|+|||=.||-
T Consensus 66 ~edi~lv~~q-~~vs~~~A~~aL~~~~gDiv~Ai~ 99 (102)
T 1tr8_A 66 EDDIELVMNQ-TGASREDATRALQETGGDLAEAIM 99 (102)
T ss_dssp HHHHHHHHHH-HCCCHHHHHHHHHHTTTCHHHHHH
T ss_pred HHHHHHHHHH-hCCCHHHHHHHHHHcCCCHHHHHH
Confidence 3557777777 899999999999999999998874
No 311
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=81.24 E-value=7.3 Score=33.67 Aligned_cols=81 Identities=7% Similarity=0.096 Sum_probs=46.5
Q ss_pred CccccccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCC
Q 021440 116 PFHVMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDS 195 (312)
Q Consensus 116 P~~l~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~ 195 (312)
|+...-..++.+-+. +...+++.+.+.+..+..+..+ ..++.....|....-.++ -..+++.|++..
T Consensus 139 ~l~~~~~~~l~~~~~--~~~~~~~al~f~~~~~~~~~~~---------~~d~~~~~~i~v~~~~~~--~~~l~~~f~v~~ 205 (244)
T 3q6o_A 139 PLEPAXLEEIDGFFA--RNNEEYLALIFEXGGSYLAREV---------ALDLSQHKGVAVRRVLNT--EANVVRKFGVTD 205 (244)
T ss_dssp CCSCCCHHHHHTHHH--HCCCSEEEEEEECTTCCHHHHH---------HHHTTTCTTEEEEEEETT--CHHHHHHHTCCC
T ss_pred CcccccHHHHHHHhh--cCCCceEEEEEEECCcchHHHH---------HHHhccCCceEEEEEeCc--hHHHHHHcCCCC
Confidence 333333344444443 3777888888877653322222 233443333333322222 367899999999
Q ss_pred CCeEEEEeCCCCeeE
Q 021440 196 IPAVLVIDPITGQKI 210 (312)
Q Consensus 196 ~P~i~IIdprTGe~v 210 (312)
||+++++++ .|+..
T Consensus 206 ~Pslvl~~~-~g~~~ 219 (244)
T 3q6o_A 206 FPSCYLLFR-NGSVS 219 (244)
T ss_dssp SSEEEEEET-TSCEE
T ss_pred CCeEEEEeC-CCCeE
Confidence 999999996 56644
No 312
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=81.09 E-value=7.8 Score=35.56 Aligned_cols=109 Identities=7% Similarity=0.038 Sum_probs=60.2
Q ss_pred CCccccccccHHHHHHHHHHc-CCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc--cEEEEEeccCChhHHHHH---
Q 021440 115 PPFHVMFNGSFEKAKDAALAQ-DKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDTSEGWKVC--- 188 (312)
Q Consensus 115 PP~~l~~~gsf~~A~~~Ak~~-~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~--nFIfwq~~~ds~EG~~~~--- 188 (312)
|.+.-+-..++.+.. ... .+..+|.+...++..|..+-.. | ..|.+-.+. .+.|.-++.+.- ..++
T Consensus 226 p~v~elt~~~~~~~~---~~~~~~~~~l~f~~~~~~~~~~~~~~-~--~~vA~~~~~~~~~~f~~id~~~~--~~~~~~~ 297 (350)
T 1sji_A 226 PTLRRLRPEDMFETW---EDDLNGIHIVAFAERSDPDGYEFLEI-L--KQVARDNTDNPDLSIVWIDPDDF--PLLVAYW 297 (350)
T ss_dssp CSEEECCTTTHHHHH---HSCSSSEEEEEECCTTSHHHHHHHHH-H--HHHHHHGGGCSSCCEEEECGGGC--HHHHHHH
T ss_pred cchhhcChhhHHHHh---cCCCCCcEEEEEEcCCCccHHHHHHH-H--HHHHHHhCCCCceEEEEECchhh--HHHHHHH
Confidence 444445555665532 221 1433333666666656654322 2 224333433 566665654432 2355
Q ss_pred -HhcCCC-CCCeEEEEeCCCCeeEEE-ec---CCCChHHHHHHHHHHHh
Q 021440 189 -SFYNMD-SIPAVLVIDPITGQKICS-WC---GMINPQPLGEMLLPFMD 231 (312)
Q Consensus 189 -~~Y~~~-~~P~i~IIdprTGe~v~~-~~---G~~~~~~fl~~L~~fl~ 231 (312)
+.+.++ .+|.|+|+++.+|.+.+. +. |.++++.+.+-|..|++
T Consensus 298 ~~~~gi~~~~P~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~F~~d~~~ 346 (350)
T 1sji_A 298 EKTFKIDLFKPQIGVVNVTDADSVWMEIPDDDDLPTAEELEDWIEDVLS 346 (350)
T ss_dssp HHHCCSCTTSCEEEEEESSSSCEEESCSSCCSCCCCHHHHHHHHHHHHT
T ss_pred HhhcCCCccCCcEEEEecccccccccCCCcccccCCHHHHHHHHHHHhc
Confidence 678786 699999999877754432 32 46788877666666664
No 313
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=80.87 E-value=3.7 Score=29.78 Aligned_cols=52 Identities=8% Similarity=-0.014 Sum_probs=32.4
Q ss_pred EEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhc-CCCCCCeEE
Q 021440 140 LVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFY-NMDSIPAVL 200 (312)
Q Consensus 140 LVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y-~~~~~P~i~ 200 (312)
++.++.+||..|+.+.+ +.+-.+-.|.. ++++......+...| ...++|.|.
T Consensus 8 v~~y~~~~C~~C~~~~~-------~L~~~~i~~~~--vdv~~~~~~~l~~~~~~~~~vP~l~ 60 (89)
T 2klx_A 8 IILYTRPNCPYCKRARD-------LLDKKGVKYTD--IDASTSLRQEMVQRANGRNTFPQIF 60 (89)
T ss_dssp EEEESCSCCTTTHHHHH-------HHHHHTCCEEE--ECSCHHHHHHHHHHHHSSCCSCEEE
T ss_pred EEEEECCCChhHHHHHH-------HHHHcCCCcEE--EECCHHHHHHHHHHhCCCCCcCEEE
Confidence 45567789999998632 11112224544 455522344677888 899999985
No 314
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=80.46 E-value=5.1 Score=30.58 Aligned_cols=62 Identities=13% Similarity=0.226 Sum_probs=37.3
Q ss_pred HcCCeEEEEeec----CCCcccchhhcccCCCHHHHHHhhc---cEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCCC
Q 021440 134 AQDKWLLVNLQS----TKEFSSLMLNRDTWGNEAVSQIISV---NFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPIT 206 (312)
Q Consensus 134 ~~~KwLLVniq~----~~~f~c~~lnRDvw~~~~V~~~i~~---nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdprT 206 (312)
+.+| |+||..+ ++|..|+... +++++ .|...-++.+..--..+...+....+|.|. |+
T Consensus 13 ~~~~-vvvy~~g~~~~~~Cp~C~~ak----------~~L~~~~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~if-i~--- 77 (109)
T 1wik_A 13 NKAS-VMLFMKGNKQEAKCGFSKQIL----------EILNSTGVEYETFDILEDEEVRQGLKTFSNWPTYPQLY-VR--- 77 (109)
T ss_dssp TTSS-EEEEESSTTTCCCSSTHHHHH----------HHHHHTCSCEEEEESSSCHHHHHHHHHHHSCCSSCEEE-CS---
T ss_pred ccCC-EEEEEecCCCCCCCchHHHHH----------HHHHHcCCCeEEEECCCCHHHHHHHHHHhCCCCCCEEE-EC---
Confidence 4445 6677765 7999999773 44443 355554443322223466677888999864 44
Q ss_pred CeeE
Q 021440 207 GQKI 210 (312)
Q Consensus 207 Ge~v 210 (312)
|+.+
T Consensus 78 g~~i 81 (109)
T 1wik_A 78 GDLV 81 (109)
T ss_dssp SSEE
T ss_pred CEEE
Confidence 6643
No 315
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=80.36 E-value=6.4 Score=32.45 Aligned_cols=40 Identities=10% Similarity=0.114 Sum_probs=29.1
Q ss_pred HHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021440 186 KVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (312)
Q Consensus 186 ~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~ 232 (312)
+++..+.+...|+++ |+ |+.+ ..|. ++++|.+.|...+.+
T Consensus 146 ~~a~~~gv~gtPt~v-in---g~~~--~~g~-~~~~l~~~i~~~~~~ 185 (193)
T 2rem_A 146 AYALKVRPVGTPTIV-VN---GRYM--VTGH-DFEDTLRITDYLVSR 185 (193)
T ss_dssp HHHHHHCCSSSSEEE-ET---TTEE--ECCS-SHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCeEE-EC---CEEE--ecCC-CHHHHHHHHHHHHHH
Confidence 455678899999954 55 5544 3677 889998888887754
No 316
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=80.20 E-value=3.2 Score=30.20 Aligned_cols=57 Identities=5% Similarity=0.003 Sum_probs=35.2
Q ss_pred EEEeecCCCcccchhhcccCCCHHHHHHhhc---cEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCCCCeeE
Q 021440 140 LVNLQSTKEFSSLMLNRDTWGNEAVSQIISV---NFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKI 210 (312)
Q Consensus 140 LVniq~~~~f~c~~lnRDvw~~~~V~~~i~~---nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdprTGe~v 210 (312)
++.++.++|..|+.+ +.++++ .|...-++.+......+...|....+|.+ +++ |+.+
T Consensus 8 v~ly~~~~C~~C~~~----------~~~L~~~~i~~~~~di~~~~~~~~~l~~~~~~~~vP~l-~~~---g~~i 67 (92)
T 2khp_A 8 VIIYTRPGCPYCARA----------KALLARKGAEFNEIDASATPELRAEMQERSGRNTFPQI-FIG---SVHV 67 (92)
T ss_dssp EEEEECTTCHHHHHH----------HHHHHHTTCCCEEEESTTSHHHHHHHHHHHTSSCCCEE-EET---TEEE
T ss_pred EEEEECCCChhHHHH----------HHHHHHcCCCcEEEECCCCHHHHHHHHHHhCCCCcCEE-EEC---CEEE
Confidence 445677899999876 344443 35555444332333467778889999965 444 5543
No 317
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=78.58 E-value=3.5 Score=29.37 Aligned_cols=71 Identities=11% Similarity=0.018 Sum_probs=41.4
Q ss_pred EEEeecCCCcccchhhcccCCCHHHHHHhhc---cEEEEEeccCCh--hHHHHHHhcCC-----CCCCeEEEEeCCCCee
Q 021440 140 LVNLQSTKEFSSLMLNRDTWGNEAVSQIISV---NFIFWQEYDDTS--EGWKVCSFYNM-----DSIPAVLVIDPITGQK 209 (312)
Q Consensus 140 LVniq~~~~f~c~~lnRDvw~~~~V~~~i~~---nFIfwq~~~ds~--EG~~~~~~Y~~-----~~~P~i~IIdprTGe~ 209 (312)
++-++.++|..|+.+. .++++ .|-+..++.+.. .-..+...+.. ..+|.|.| | |+.
T Consensus 6 v~ly~~~~Cp~C~~~~----------~~L~~~~i~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i-~---g~~ 71 (89)
T 3msz_A 6 VKIYTRNGCPYCVWAK----------QWFEENNIAFDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFI-D---DEH 71 (89)
T ss_dssp EEEEECTTCHHHHHHH----------HHHHHTTCCCEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEE-T---TEE
T ss_pred EEEEEcCCChhHHHHH----------HHHHHcCCCceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEE-C---CEE
Confidence 4455678999998863 34443 355554443322 22457777777 89999964 4 664
Q ss_pred EEEecCCCChHHHHHHHHHHH
Q 021440 210 ICSWCGMINPQPLGEMLLPFM 230 (312)
Q Consensus 210 v~~~~G~~~~~~fl~~L~~fl 230 (312)
+ .| .+++.+.+.+.+
T Consensus 72 i---~g---~~~i~~~~~~~~ 86 (89)
T 3msz_A 72 I---GG---FTELKANADKIL 86 (89)
T ss_dssp E---ES---HHHHHHTHHHHT
T ss_pred E---eC---hHHHHHHHHHHh
Confidence 4 34 445555554443
No 318
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=75.49 E-value=14 Score=27.59 Aligned_cols=73 Identities=11% Similarity=0.062 Sum_probs=41.8
Q ss_pred EEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCCh-hHHHH----HHhcCCCCCCeEEEEeCCCCeeEEEec
Q 021440 140 LVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTS-EGWKV----CSFYNMDSIPAVLVIDPITGQKICSWC 214 (312)
Q Consensus 140 LVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~-EG~~~----~~~Y~~~~~P~i~IIdprTGe~v~~~~ 214 (312)
++-++.+||..|+++.+ +.+-.+-.|-...++.+.. +...+ ...+...++|.|.| + .|+. +
T Consensus 24 v~ly~~~~Cp~C~~ak~-------~L~~~~i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i-~--~~~~---i- 89 (103)
T 3nzn_A 24 VIMYGLSTCVWCKKTKK-------LLTDLGVDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTII-N--DEKA---I- 89 (103)
T ss_dssp EEEEECSSCHHHHHHHH-------HHHHHTBCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEE-T--TTEE---E-
T ss_pred EEEEcCCCCchHHHHHH-------HHHHcCCCcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEE-C--CCEE---E-
Confidence 33356789999998832 2223344576666665433 33333 34577899999876 3 1332 3
Q ss_pred CCCChHHHHHHH
Q 021440 215 GMINPQPLGEML 226 (312)
Q Consensus 215 G~~~~~~fl~~L 226 (312)
|..+++++.+.|
T Consensus 90 gg~~~~~l~~~L 101 (103)
T 3nzn_A 90 VGFKEKEIRESL 101 (103)
T ss_dssp ESCCHHHHHHHT
T ss_pred EcCCHHHHHHHh
Confidence 335676655443
No 319
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=75.47 E-value=7.1 Score=31.64 Aligned_cols=71 Identities=13% Similarity=0.232 Sum_probs=43.1
Q ss_pred cHHHHHHHHHHcCCeEEEEeec----CCCcccchhhcccCCCHHHHHHhhc---cEEEEEeccCChhHH-HHHHhcCCCC
Q 021440 124 SFEKAKDAALAQDKWLLVNLQS----TKEFSSLMLNRDTWGNEAVSQIISV---NFIFWQEYDDTSEGW-KVCSFYNMDS 195 (312)
Q Consensus 124 sf~~A~~~Ak~~~KwLLVniq~----~~~f~c~~lnRDvw~~~~V~~~i~~---nFIfwq~~~ds~EG~-~~~~~Y~~~~ 195 (312)
+..+.+...-+.++ |.||..+ ++|..|... ++++++ .|..+-++.+ ++.. .+...+...+
T Consensus 23 ~~~~~v~~~i~~~~-Vvvy~ks~~~~~~Cp~C~~a----------k~~L~~~gv~y~~vdI~~d-~~~~~~L~~~~G~~t 90 (135)
T 2wci_A 23 TTIEKIQRQIAENP-ILLYMKGSPKLPSCGFSAQA----------VQALAACGERFAYVDILQN-PDIRAELPKYANWPT 90 (135)
T ss_dssp HHHHHHHHHHHHCS-EEEEESBCSSSBSSHHHHHH----------HHHHHTTCSCCEEEEGGGC-HHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHhccCC-EEEEEEecCCCCCCccHHHH----------HHHHHHcCCceEEEECCCC-HHHHHHHHHHHCCCC
Confidence 34555555666665 6667775 789988876 445544 3555555443 3333 4555667789
Q ss_pred CCeEEEEeCCCCeeE
Q 021440 196 IPAVLVIDPITGQKI 210 (312)
Q Consensus 196 ~P~i~IIdprTGe~v 210 (312)
+|.|. || |+.+
T Consensus 91 vP~Vf-I~---G~~i 101 (135)
T 2wci_A 91 FPQLW-VD---GELV 101 (135)
T ss_dssp SCEEE-ET---TEEE
T ss_pred cCEEE-EC---CEEE
Confidence 99875 44 6643
No 320
>1aip_C EF-TS, elongation factor TS; nucleotide exchange, GTP-binding, complex of two elongation factors; 3.00A {Thermus thermophilus} SCOP: a.5.2.2 d.43.1.1
Probab=74.77 E-value=3 Score=36.55 Aligned_cols=41 Identities=20% Similarity=0.310 Sum_probs=36.5
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcC
Q 021440 8 KESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVN 49 (312)
Q Consensus 8 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~~ 49 (312)
.-.+|....+. ||+..-.|++-|+.++||+|.|+...-..+
T Consensus 3 ~a~~VKeLRe~-TGagmmdCKkAL~e~~GD~ekAie~LR~kG 43 (196)
T 1aip_C 3 QMELIKKLREA-TGAGMMDVKRALEDAGWDEEKAVQLLRERG 43 (196)
T ss_dssp HHHHHHHHHHH-HCCCHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHH-hCCCHHHHHHHHHHcCCCHHHHHHHHHHcC
Confidence 35689999999 999999999999999999999999887644
No 321
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=74.39 E-value=13 Score=30.11 Aligned_cols=34 Identities=6% Similarity=0.193 Sum_probs=24.3
Q ss_pred HHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHH
Q 021440 186 KVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEML 226 (312)
Q Consensus 186 ~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L 226 (312)
++++.+.+...|+++| + |+. +.|..+++.|.+.|
T Consensus 140 ~~a~~~gv~gtPt~vv-n---g~~---~~G~~~~~~l~~~i 173 (175)
T 1z6m_A 140 AEANAAHIQFVPTIII-G---EYI---FDESVTEEELRGYI 173 (175)
T ss_dssp HHHHHHTCCSSCEEEE-T---TEE---ECTTCCHHHHHHHH
T ss_pred HHHHHcCCCCcCeEEE-C---CEE---ccCCCCHHHHHHHh
Confidence 4556788899999654 4 663 46888888776655
No 322
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=74.08 E-value=13 Score=34.44 Aligned_cols=94 Identities=12% Similarity=0.083 Sum_probs=54.7
Q ss_pred CCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc--cEEEEEeccCC-hhHHHH-HHhcCCC-CCCeEEEEeCCCCeeE
Q 021440 136 DKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDDT-SEGWKV-CSFYNMD-SIPAVLVIDPITGQKI 210 (312)
Q Consensus 136 ~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~--nFIfwq~~~ds-~EG~~~-~~~Y~~~-~~P~i~IIdprTGe~v 210 (312)
.+.++|.+.+.++..|..+-+.+ ..|.+-.+. .+.|.-++.+. +....+ ...+.+. .+|.|+|+++.++...
T Consensus 247 ~~~~~~~f~~~~~~~~~~~~~~l---~~vA~~~~~~~ki~F~~id~~~~~~~l~~~~~~fgl~~~~P~~~i~~~~~~~~~ 323 (367)
T 3us3_A 247 DGIHIVAFAEEADPDGYEFLEIL---KSVAQDNTDNPDLSIIWIDPDDFPLLVPYWEKTFDIDLSAPQIGVVNVTDADSV 323 (367)
T ss_dssp TTEEEEEECCTTSHHHHHHHHHH---HHHHHHTTTCTTCCEEEECGGGCTTTHHHHHHHHTCCTTSCEEEEEETTTCCEE
T ss_pred CCcEEEEEEcCCChhHHHHHHHH---HHHHHHcCCCCceEEEEECCccchhHHHHHHHhcCCCCCCCeEEEEecccccce
Confidence 34445556666665555554321 334444444 46666665554 223233 4567775 7999999998766322
Q ss_pred -EEecC---CCChHHHHHHHHHHHhh
Q 021440 211 -CSWCG---MINPQPLGEMLLPFMDR 232 (312)
Q Consensus 211 -~~~~G---~~~~~~fl~~L~~fl~~ 232 (312)
..+.+ .++++.+.+-|..|++.
T Consensus 324 ~y~~~~~~~~~t~~~i~~F~~~~~~G 349 (367)
T 3us3_A 324 WMEMDDEEDLPSAEELEDWLEDVLEG 349 (367)
T ss_dssp ECCCCTTSCCCCHHHHHHHHHHHHHT
T ss_pred eecCCcccccCCHHHHHHHHHHHHcC
Confidence 22343 57888877777777755
No 323
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=72.72 E-value=11 Score=31.83 Aligned_cols=46 Identities=7% Similarity=0.090 Sum_probs=37.3
Q ss_pred HHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhC
Q 021440 186 KVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRS 233 (312)
Q Consensus 186 ~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~~ 233 (312)
+.+..+.+...|+++|-+ .|+.+....|+.+++.|++.|.+.+++.
T Consensus 160 ~~a~~~gv~g~Pt~~v~~--~~~~~~~~~g~~~~e~~~~~i~~~~~~~ 205 (208)
T 3kzq_A 160 SLAKSLGVNSYPSLVLQI--NDAYFPIEVDYLSTEPTLKLIRERIIEN 205 (208)
T ss_dssp HHHHHTTCCSSSEEEEEE--TTEEEEECCCSSCSHHHHHHHHHHHHHT
T ss_pred HHHHHcCCCcccEEEEEE--CCEEEEeeCCCCCHHHHHHHHHHHHhcc
Confidence 455678899999998866 4777767789999999999999988653
No 324
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=72.60 E-value=12 Score=31.49 Aligned_cols=48 Identities=13% Similarity=0.250 Sum_probs=38.9
Q ss_pred HHHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhCC
Q 021440 185 WKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRSP 234 (312)
Q Consensus 185 ~~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~~~ 234 (312)
.+.+..+.+...|+++|.. .|+.+..+.|..+++.|.+.|.+.+.++.
T Consensus 166 ~~~a~~~gv~g~Pt~~i~~--~G~~~~~~~G~~~~~~l~~~l~~~~~~~~ 213 (216)
T 2in3_A 166 FQRVAQWGISGFPALVVES--GTDRYLITTGYRPIEALRQLLDTWLQQHG 213 (216)
T ss_dssp HHHHHHTTCCSSSEEEEEE--TTEEEEEESSCCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHcCCcccceEEEEE--CCEEEEeccCCCCHHHHHHHHHHHHHhcc
Confidence 3566788999999998875 48876667899999999999999887643
No 325
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=71.49 E-value=7.4 Score=30.96 Aligned_cols=71 Identities=14% Similarity=0.110 Sum_probs=42.2
Q ss_pred HHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc------cEEEEEeccCCh--hH-HHHHHhcCCCC
Q 021440 125 FEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV------NFIFWQEYDDTS--EG-WKVCSFYNMDS 195 (312)
Q Consensus 125 f~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~------nFIfwq~~~ds~--EG-~~~~~~Y~~~~ 195 (312)
..+.+....+..+ |.| +..+||..|+.. ++.++++ .|.++.++.+.. +. ..+...|...+
T Consensus 26 ~~~~v~~~i~~~~-Vvv-y~~~~Cp~C~~a---------~k~~L~~~~~~~i~~~~vdvd~~~~~~~~~~~L~~~~g~~t 94 (129)
T 3ctg_A 26 TVAHVKDLIGQKE-VFV-AAKTYCPYCKAT---------LSTLFQELNVPKSKALVLELDEMSNGSEIQDALEEISGQKT 94 (129)
T ss_dssp HHHHHHHHHHHSS-EEE-EECTTCHHHHHH---------HHHHHTTSCCCGGGEEEEEGGGSTTHHHHHHHHHHHHSCCS
T ss_pred HHHHHHHHHcCCC-EEE-EECCCCCchHHH---------HHHHHHhcCccCCCcEEEEccccCCHHHHHHHHHHHhCCCC
Confidence 4444555555566 444 456799999976 2444432 355555554431 22 35677888899
Q ss_pred CCeEEEEeCCCCeeE
Q 021440 196 IPAVLVIDPITGQKI 210 (312)
Q Consensus 196 ~P~i~IIdprTGe~v 210 (312)
+|.| +|+ |+.+
T Consensus 95 VP~v-fi~---g~~i 105 (129)
T 3ctg_A 95 VPNV-YIN---GKHI 105 (129)
T ss_dssp SCEE-EET---TEEE
T ss_pred CCEE-EEC---CEEE
Confidence 9997 455 5644
No 326
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=71.38 E-value=15 Score=34.06 Aligned_cols=103 Identities=9% Similarity=0.081 Sum_probs=52.2
Q ss_pred ccccHHHHHHHHHHcCCeEEEEeecCCCcc-cchhhcccCCCHHHHHHh---hccEEEEEeccCChhHHHHHHhcCCC--
Q 021440 121 FNGSFEKAKDAALAQDKWLLVNLQSTKEFS-SLMLNRDTWGNEAVSQII---SVNFIFWQEYDDTSEGWKVCSFYNMD-- 194 (312)
Q Consensus 121 ~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~-c~~lnRDvw~~~~V~~~i---~~nFIfwq~~~ds~EG~~~~~~Y~~~-- 194 (312)
-.-+.+.+.... ..++.++|.+...++.. |+.+- ..|.+.. +..+.|.-++.+. -..++..+.+.
T Consensus 222 ~elt~~~~~~~~-~~~~~~~v~f~~~~~~~~~~~~~------~~~~~~~~~~~~~i~f~~id~~~--~~~~~~~~gl~~~ 292 (382)
T 2r2j_A 222 REITFENGEELT-EEGLPFLILFHMKEDTESLEIFQ------NEVARQLISEKGTINFLHADCDK--FRHPLLHIQKTPA 292 (382)
T ss_dssp EECCHHHHHHHH-TTCCCEEEEEECTTCCHHHHHHH------HHHHHHTGGGTTTSEEEEEETTT--THHHHHHTTCCGG
T ss_pred EecChhhHHHHh-cCCCcEEEEEecCCchHHHHHHH------HHHHHHHHHhCCeeEEEEEchHH--hHHHHHHcCCCcc
Confidence 344445554443 34555556666655432 22221 1222222 3456676666553 33567888885
Q ss_pred CCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021440 195 SIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (312)
Q Consensus 195 ~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~ 232 (312)
.+|.|+|++.+.+..+....|..+++.+.+-|..|++.
T Consensus 293 ~~P~i~i~~~~~~y~~~~~~~~~~~~~i~~F~~d~~~G 330 (382)
T 2r2j_A 293 DCPVIAIDSFRHMYVFGDFKDVLIPGKLKQFVFDLHSG 330 (382)
T ss_dssp GCSEEEEECSSCEEECCCSGGGGSTTHHHHHHHHHHHT
T ss_pred CCCEEEEEcchhcCCCCccccccCHHHHHHHHHHHHCC
Confidence 69999999863221111123334556655555555543
No 327
>1xb2_B EF-TS, elongation factor TS, mitochondrial, EF-TSMT; protein-protein complex, translation; HET: MSE; 2.20A {Bos taurus} SCOP: a.5.2.2 d.43.1.1 d.43.1.1
Probab=69.91 E-value=3.8 Score=37.97 Aligned_cols=38 Identities=13% Similarity=0.100 Sum_probs=35.2
Q ss_pred HHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHh
Q 021440 9 ESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFA 47 (312)
Q Consensus 9 ~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~ 47 (312)
..+|.+..+. ||+..-.|++-|+.++||+|.|+..--.
T Consensus 5 a~~VKeLRe~-TGagmmdCKKAL~e~~GD~ekAie~LR~ 42 (291)
T 1xb2_B 5 KELLMKLRRK-TGYSFINCKKALETCGGDLKQAESWLHK 42 (291)
T ss_dssp HHHHHHHHHH-HCCCHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHH-hCCCHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 4678899999 9999999999999999999999998876
No 328
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=69.62 E-value=16 Score=28.64 Aligned_cols=64 Identities=19% Similarity=0.230 Sum_probs=37.8
Q ss_pred HHHHHHHHHcCCeEEEEeec----CCCcccchhhcccCCCHHHHHHhhcc------EEEEEeccCChhHH-HHHHhcCCC
Q 021440 126 EKAKDAALAQDKWLLVNLQS----TKEFSSLMLNRDTWGNEAVSQIISVN------FIFWQEYDDTSEGW-KVCSFYNMD 194 (312)
Q Consensus 126 ~~A~~~Ak~~~KwLLVniq~----~~~f~c~~lnRDvw~~~~V~~~i~~n------FIfwq~~~ds~EG~-~~~~~Y~~~ 194 (312)
.+.++..-+.++ |+||-.+ ++|..|... +++++++ |..+-+..+ ++.. .+.......
T Consensus 6 ~~~v~~~i~~~~-Vvvfsk~t~~~p~Cp~C~~a----------k~lL~~~gv~~~~~~~~dv~~~-~~~~~~l~~~sg~~ 73 (121)
T 3gx8_A 6 RKAIEDAIESAP-VVLFMKGTPEFPKCGFSRAT----------IGLLGNQGVDPAKFAAYNVLED-PELREGIKEFSEWP 73 (121)
T ss_dssp HHHHHHHHHSCS-EEEEESBCSSSBCTTHHHHH----------HHHHHHHTBCGGGEEEEECTTC-HHHHHHHHHHHTCC
T ss_pred HHHHHHHhccCC-EEEEEeccCCCCCCccHHHH----------HHHHHHcCCCcceEEEEEecCC-HHHHHHHHHHhCCC
Confidence 344555555666 6666666 489888877 4455442 555544332 3333 344556778
Q ss_pred CCCeEEE
Q 021440 195 SIPAVLV 201 (312)
Q Consensus 195 ~~P~i~I 201 (312)
++|.|.|
T Consensus 74 tvP~vfI 80 (121)
T 3gx8_A 74 TIPQLYV 80 (121)
T ss_dssp SSCEEEE
T ss_pred CCCeEEE
Confidence 8999853
No 329
>2qho_B E3 ubiquitin-protein ligase EDD1; protein-protein complex, protein binding/ligase complex; 1.85A {Homo sapiens}
Probab=69.53 E-value=11 Score=25.85 Aligned_cols=43 Identities=23% Similarity=0.161 Sum_probs=37.5
Q ss_pred hhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcC
Q 021440 7 DKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVN 49 (312)
Q Consensus 7 ~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~~ 49 (312)
-.+++|.|-..+-.|.+.++-++=|+++|-|+..||+..+...
T Consensus 8 vPe~li~q~q~VLqgksR~vIirELqrTnLdVN~AvNNlLsRD 50 (53)
T 2qho_B 8 IPEELISQAQVVLQGKSRSVIIRELQRTNLDVNLAVNNLLSRD 50 (53)
T ss_dssp SCHHHHHHHHHHSTTCCHHHHHHHHHHTTTCHHHHHHHHHC--
T ss_pred CcHHHHHHHHHHhcCCcHHHHHHHHHHhCccHHHHHHHHhccc
Confidence 3578899998888999999999999999999999999887643
No 330
>1oqy_A HHR23A, UV excision repair protein RAD23 homolog A; DNA repair, proteasome-mediated degradation, protein- protein interaction, replication; NMR {Homo sapiens} SCOP: a.5.2.1 a.5.2.1 a.189.1.1 d.15.1.1 PDB: 1qze_A 1tp4_A
Probab=69.35 E-value=2.3 Score=40.66 Aligned_cols=42 Identities=12% Similarity=0.193 Sum_probs=37.9
Q ss_pred hhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcCC
Q 021440 7 DKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVNE 50 (312)
Q Consensus 7 ~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~~~ 50 (312)
...+.|.+.+++ |-+.+.|++-|.+++||++.|++-.|++-.
T Consensus 167 ~~~~~i~~l~~M--Gf~~~~~~~AL~a~~nn~~~A~e~L~~gip 208 (368)
T 1oqy_A 167 EYETMLTEIMSM--GYERERVVAALRASYNNPHRAVEYLLTGIP 208 (368)
T ss_dssp THHHHHHHHHTT--TCCSHHHHHHHHHSCSSTTHHHHTTTTSST
T ss_pred chHHHHHHHHHc--CCCHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 467899999999 899999999999999999999999987643
No 331
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=69.26 E-value=13 Score=32.37 Aligned_cols=108 Identities=16% Similarity=0.128 Sum_probs=57.9
Q ss_pred CCCccccccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCH--HHHHHhhcc---EEEEEeccCChhHHHHH
Q 021440 114 RPPFHVMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNE--AVSQIISVN---FIFWQEYDDTSEGWKVC 188 (312)
Q Consensus 114 rPP~~l~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~--~V~~~i~~n---FIfwq~~~ds~EG~~~~ 188 (312)
.|.+..+-..++.+. ....++++++........... +-|.+. .|.+-.+.. +.|.-++.+. -+ +++
T Consensus 113 ~Plv~e~t~~n~~~~-----~~~~~~v~~~~~~~~~~~~~~--~~~~~~~~~vA~~~~~k~~~~~F~~~d~~~-~~-~~~ 183 (252)
T 2h8l_A 113 FGICPHMTEDNKDLI-----QGKDLLIAYYDVDYEKNAKGS--NYWRNRVMMVAKKFLDAGHKLNFAVASRKT-FS-HEL 183 (252)
T ss_dssp SCSSCEECTTTHHHH-----SSSSEEEEEECCBTTTBHHHH--HHHHHHHHHHHHHHHHTTCCCEEEEEETTT-TH-HHH
T ss_pred cCCeeecccccHhhh-----cCCCeEEEEeecchhhcchhH--HHHHHHHHHHHHHccccCceEEEEEEchHH-HH-HHH
Confidence 455555556665553 234555555432221111111 112222 233333333 7777676552 22 478
Q ss_pred HhcCC----CCCCeEEEEeCCCCeeEEEecCCCChHH--HHHHHHHHHhh
Q 021440 189 SFYNM----DSIPAVLVIDPITGQKICSWCGMINPQP--LGEMLLPFMDR 232 (312)
Q Consensus 189 ~~Y~~----~~~P~i~IIdprTGe~v~~~~G~~~~~~--fl~~L~~fl~~ 232 (312)
..+.+ ..+|.|+|++. .|.+ ....+.++.+. +.+-|..|++.
T Consensus 184 ~~fgl~~~~~~~P~v~i~~~-~~~k-y~~~~~~t~~~~~i~~F~~~~~~G 231 (252)
T 2h8l_A 184 SDFGLESTAGEIPVVAIRTA-KGEK-FVMQEEFSRDGKALERFLQDYFDG 231 (252)
T ss_dssp GGGTCCCCSCSSCEEEEECT-TSCE-EECCSCCCTTSHHHHHHHHHHHHT
T ss_pred HHcCCCCccCCCCEEEEEeC-cCcE-ecCCcccCcchHHHHHHHHHHHCC
Confidence 88888 36999999986 4543 34566667666 66666666654
No 332
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=69.23 E-value=16 Score=27.92 Aligned_cols=69 Identities=9% Similarity=0.167 Sum_probs=41.5
Q ss_pred HHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc---cEEEEEeccCChhHH----HHHHhcCCCCCC
Q 021440 125 FEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV---NFIFWQEYDDTSEGW----KVCSFYNMDSIP 197 (312)
Q Consensus 125 f~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~---nFIfwq~~~ds~EG~----~~~~~Y~~~~~P 197 (312)
..+.++...+.++.++ +..+||..|+.. +.++++ .|-...++.. +++. .+...+...++|
T Consensus 6 ~~~~~~~~i~~~~v~v--y~~~~Cp~C~~a----------k~~L~~~~i~~~~~dvd~~-~~~~~~~~~l~~~~g~~tvP 72 (114)
T 3h8q_A 6 LRRHLVGLIERSRVVI--FSKSYCPHSTRV----------KELFSSLGVECNVLELDQV-DDGARVQEVLSEITNQKTVP 72 (114)
T ss_dssp HHHHHHHHHHHCSEEE--EECTTCHHHHHH----------HHHHHHTTCCCEEEETTTS-TTHHHHHHHHHHHHSCCSSC
T ss_pred HHHHHHHHhccCCEEE--EEcCCCCcHHHH----------HHHHHHcCCCcEEEEecCC-CChHHHHHHHHHHhCCCccC
Confidence 3455555666677444 666899999876 344443 3555544432 2222 345677788999
Q ss_pred eEEEEeCCCCeeE
Q 021440 198 AVLVIDPITGQKI 210 (312)
Q Consensus 198 ~i~IIdprTGe~v 210 (312)
.|.| + |+.+
T Consensus 73 ~vfi-~---g~~i 81 (114)
T 3h8q_A 73 NIFV-N---KVHV 81 (114)
T ss_dssp EEEE-T---TEEE
T ss_pred EEEE-C---CEEE
Confidence 9975 3 6644
No 333
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=68.68 E-value=11 Score=28.37 Aligned_cols=59 Identities=15% Similarity=0.043 Sum_probs=34.3
Q ss_pred EEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhc-CCCCCCeEEEEeCCCCeeE
Q 021440 141 VNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFY-NMDSIPAVLVIDPITGQKI 210 (312)
Q Consensus 141 Vniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y-~~~~~P~i~IIdprTGe~v 210 (312)
+-+..+||..|++..+ +.+-.+-.|...-++.+......+...+ ...++|.| +|+ |+.+
T Consensus 19 ~vy~~~~Cp~C~~ak~-------~L~~~~i~y~~idI~~~~~~~~~l~~~~~g~~~vP~i-fi~---g~~i 78 (99)
T 3qmx_A 19 EIYTWSTCPFCMRALA-------LLKRKGVEFQEYCIDGDNEAREAMAARANGKRSLPQI-FID---DQHI 78 (99)
T ss_dssp EEEECTTCHHHHHHHH-------HHHHHTCCCEEEECTTCHHHHHHHHHHTTTCCCSCEE-EET---TEEE
T ss_pred EEEEcCCChhHHHHHH-------HHHHCCCCCEEEEcCCCHHHHHHHHHHhCCCCCCCEE-EEC---CEEE
Confidence 3456679999998842 1222233466555544322233466666 78899988 455 6543
No 334
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=66.27 E-value=11 Score=32.06 Aligned_cols=47 Identities=11% Similarity=0.039 Sum_probs=28.9
Q ss_pred cCCeEE-EEeecCCCcccch--hhcccCCCHHHHHHhhccE-EEEEeccCChhH
Q 021440 135 QDKWLL-VNLQSTKEFSSLM--LNRDTWGNEAVSQIISVNF-IFWQEYDDTSEG 184 (312)
Q Consensus 135 ~~KwLL-Vniq~~~~f~c~~--lnRDvw~~~~V~~~i~~nF-Ifwq~~~ds~EG 184 (312)
.+||++ +++-..||+.|.. ++.- ++...+|-..++ .++.++.|++..
T Consensus 46 ~Gk~vVL~fyP~~~tp~Ct~~El~~f---~~~~~ef~~~g~d~VigIS~D~~~~ 96 (176)
T 4f82_A 46 AGKRVVIFGLPGAFTPTCSAQHVPGY---VEHAEQLRAAGIDEIWCVSVNDAFV 96 (176)
T ss_dssp TTCEEEEEEESCTTCHHHHHTHHHHH---HHHHHHHHHTTCCEEEEEESSCHHH
T ss_pred CCCeEEEEEEcCCCCCCCCHHHHHHH---HHHHHHHHhCCCCEEEEEeCCCHHH
Confidence 367664 4555889999976 3211 233445555667 777888777543
No 335
>2di0_A Activating signal cointegrator 1 complex subunit 2; ASCC2, CUE domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=65.03 E-value=15 Score=26.89 Aligned_cols=42 Identities=14% Similarity=0.192 Sum_probs=37.6
Q ss_pred hhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhc
Q 021440 7 DKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAV 48 (312)
Q Consensus 7 ~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~ 48 (312)
+-+++|.+..+|=-.-.....+++|+.+|.|.|.+|+..|++
T Consensus 12 ~l~s~I~qV~DLfPdLG~gfi~~~L~~y~~nvE~vin~LLE~ 53 (71)
T 2di0_A 12 ELDSLISQVKDLLPDLGEGFILACLEYYHYDPEQVINNILEE 53 (71)
T ss_dssp HHHHHHHHHHHHCCSSCHHHHHHHHHHTTTCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcccCCHHHHHHHHHHhCCCHHHHHHHHHcc
Confidence 457788888888777789999999999999999999999995
No 336
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=64.99 E-value=13 Score=29.17 Aligned_cols=67 Identities=22% Similarity=0.308 Sum_probs=39.8
Q ss_pred cHHHHHHHHHHcCCeEEEEeec----CCCcccchhhcccCCCHHHHHHhhcc----EEEEEeccCChhHHH-HHHhcCCC
Q 021440 124 SFEKAKDAALAQDKWLLVNLQS----TKEFSSLMLNRDTWGNEAVSQIISVN----FIFWQEYDDTSEGWK-VCSFYNMD 194 (312)
Q Consensus 124 sf~~A~~~Ak~~~KwLLVniq~----~~~f~c~~lnRDvw~~~~V~~~i~~n----FIfwq~~~ds~EG~~-~~~~Y~~~ 194 (312)
...+.++..-++++ |+||-.+ ++|..|... ++++++. |..+-++. .++... +.......
T Consensus 8 ~~~~~v~~~i~~~~-Vvvfsk~t~~~p~Cp~C~~a----------k~lL~~~gv~~~~~vdV~~-d~~~~~~l~~~tg~~ 75 (118)
T 2wem_A 8 GSAEQLDALVKKDK-VVVFLKGTPEQPQCGFSNAV----------VQILRLHGVRDYAAYNVLD-DPELRQGIKDYSNWP 75 (118)
T ss_dssp -CHHHHHHHHHHSS-EEEEESBCSSSBSSHHHHHH----------HHHHHHTTCCCCEEEESSS-CHHHHHHHHHHHTCC
T ss_pred cHHHHHHHHhccCC-EEEEEecCCCCCccHHHHHH----------HHHHHHcCCCCCEEEEcCC-CHHHHHHHHHHhCCC
Confidence 44556666666666 5666665 488888876 4556543 44444432 244443 44455678
Q ss_pred CCCeEEEEe
Q 021440 195 SIPAVLVID 203 (312)
Q Consensus 195 ~~P~i~IId 203 (312)
.+|.|. |+
T Consensus 76 tvP~vf-I~ 83 (118)
T 2wem_A 76 TIPQVY-LN 83 (118)
T ss_dssp SSCEEE-ET
T ss_pred CcCeEE-EC
Confidence 899985 44
No 337
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=63.87 E-value=12 Score=30.11 Aligned_cols=43 Identities=12% Similarity=0.073 Sum_probs=31.3
Q ss_pred HHHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021440 185 WKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (312)
Q Consensus 185 ~~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~ 231 (312)
.+.++.+++...|+++| .|+.+..-.|..+.++|++.+..-|+
T Consensus 140 ~~~a~~~gv~gTPtfiI----NGky~v~~~~~~s~e~~~~~i~~Ll~ 182 (184)
T 4dvc_A 140 DKQFQDSGLTGVPAVVV----NNRYLVQGQSAKSLDEYFDLVNYLLT 182 (184)
T ss_dssp HHHHHHHTCCSSSEEEE----TTTEEECGGGCSSHHHHHHHHHHHTT
T ss_pred HHHHHHcCCCcCCEEEE----CCEEeeCCcCCCCHHHHHHHHHHHHh
Confidence 35677899999999875 47755444566788999887765443
No 338
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=63.06 E-value=23 Score=26.95 Aligned_cols=71 Identities=13% Similarity=0.137 Sum_probs=42.1
Q ss_pred HHHHHHHHHHcCCeEEEEeec----CCCcccchhhcccCCCHHHHHHhhc---cEEEEEeccCChhHHHHHHhcCCCCCC
Q 021440 125 FEKAKDAALAQDKWLLVNLQS----TKEFSSLMLNRDTWGNEAVSQIISV---NFIFWQEYDDTSEGWKVCSFYNMDSIP 197 (312)
Q Consensus 125 f~~A~~~Ak~~~KwLLVniq~----~~~f~c~~lnRDvw~~~~V~~~i~~---nFIfwq~~~ds~EG~~~~~~Y~~~~~P 197 (312)
..+.+...-+.++ |+||..+ ++|..|+.. ++++++ .|..+-++.+...-..+........+|
T Consensus 7 ~~~~v~~~i~~~~-Vvvy~k~t~~~p~Cp~C~~a----------k~~L~~~gi~~~~~dI~~~~~~~~~l~~~~g~~tvP 75 (109)
T 3ipz_A 7 LKDTLEKLVNSEK-VVLFMKGTRDFPMCGFSNTV----------VQILKNLNVPFEDVNILENEMLRQGLKEYSNWPTFP 75 (109)
T ss_dssp HHHHHHHHHTSSS-EEEEESBCSSSBSSHHHHHH----------HHHHHHTTCCCEEEEGGGCHHHHHHHHHHHTCSSSC
T ss_pred HHHHHHHHHccCC-EEEEEecCCCCCCChhHHHH----------HHHHHHcCCCcEEEECCCCHHHHHHHHHHHCCCCCC
Confidence 3455555556665 6667666 489888876 455554 355555543322223455566778999
Q ss_pred eEEEEeCCCCeeE
Q 021440 198 AVLVIDPITGQKI 210 (312)
Q Consensus 198 ~i~IIdprTGe~v 210 (312)
.|. |+ |+.+
T Consensus 76 ~if-i~---g~~i 84 (109)
T 3ipz_A 76 QLY-IG---GEFF 84 (109)
T ss_dssp EEE-ET---TEEE
T ss_pred eEE-EC---CEEE
Confidence 775 44 5543
No 339
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=61.04 E-value=19 Score=35.51 Aligned_cols=83 Identities=7% Similarity=0.188 Sum_probs=47.3
Q ss_pred HcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCCCCeeEEEe
Q 021440 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSW 213 (312)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdprTGe~v~~~ 213 (312)
...++++|.+.+.... +- .+...++.....|.+..-.++ ...+++.|++..||+++++++ .|+. ...
T Consensus 155 ~~~~~vallF~~~~s~----~~-----~~~~ldl~~~~~v~v~~v~~~--~~~l~~kfgV~~~Pslvl~~~-nGk~-~~~ 221 (519)
T 3t58_A 155 NKADYLALVFEREDSY----LG-----REVTLDLSQYHAVAVRRVLNT--ESDLVNKFGVTDFPSCYLLLR-NGSV-SRV 221 (519)
T ss_dssp CCCSEEEEEEECTTCC----HH-----HHHHHHTTTCTTEEEEEEETT--CHHHHHHHTCCCSSEEEEEET-TSCE-EEC
T ss_pred CCCCeEEEEecCCchH----HH-----HHHHHHhhccCCeeEEEecCc--hHHHHHHcCCCCCCeEEEEeC-CCce-eec
Confidence 6678888888875311 11 122334443333444433232 356889999999999999996 4653 333
Q ss_pred cCCCChHHHHHHHHHHHhh
Q 021440 214 CGMINPQPLGEMLLPFMDR 232 (312)
Q Consensus 214 ~G~~~~~~fl~~L~~fl~~ 232 (312)
....+...++. .+|.+
T Consensus 222 ~v~~~~r~~~~---~~l~~ 237 (519)
T 3t58_A 222 PVLVESRSFYT---SYLRG 237 (519)
T ss_dssp CCSSCSHHHHH---HHHTT
T ss_pred ccccccHHHHH---HHHHH
Confidence 33344444443 55554
No 340
>1q0v_A Hydrophilic protein; has cysteine rich putative zinc finger esential for function;...; stable, non-interacting alpha-helices; NMR {Saccharomyces cerevisiae} SCOP: j.105.1.1 PDB: 1q0w_A
Probab=59.61 E-value=6.1 Score=29.81 Aligned_cols=22 Identities=14% Similarity=0.243 Sum_probs=18.6
Q ss_pred CCChHHHHHHHHHHhhHhhcCC
Q 021440 252 PQRNIKDCCSALAASMETIKDT 273 (312)
Q Consensus 252 ~~~~~eql~~Ai~~Sl~~~~~~ 273 (312)
...++++|.+||+.||++.++.
T Consensus 8 ~~~eDeDLkrAieLSL~Es~~~ 29 (81)
T 1q0v_A 8 PEDEEELIRKAIELSLKESRNS 29 (81)
T ss_dssp CSSHHHHHHHHHHHHHHCCCCC
T ss_pred ccCchHHHHHHHHHhHHHHcCC
Confidence 4567899999999999998754
No 341
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=56.30 E-value=15 Score=31.05 Aligned_cols=55 Identities=9% Similarity=-0.048 Sum_probs=33.0
Q ss_pred cCCeEEEEee-cCCCcccc-h-hhcccCCCHHHHHH-hhccE-EEEEeccCChhHH-HHHHhcC
Q 021440 135 QDKWLLVNLQ-STKEFSSL-M-LNRDTWGNEAVSQI-ISVNF-IFWQEYDDTSEGW-KVCSFYN 192 (312)
Q Consensus 135 ~~KwLLVniq-~~~~f~c~-~-lnRDvw~~~~V~~~-i~~nF-Ifwq~~~ds~EG~-~~~~~Y~ 192 (312)
.+||++++++ ..+++.|. . ++. . ++...+| -..+. .++.++.|++... +++..+.
T Consensus 42 ~gk~vVL~fyP~~fTp~Ct~~e~~~-f--~~~~~~f~~~~g~~~V~gvS~D~~~~~~~~~~~~~ 102 (182)
T 1xiy_A 42 NNKKILLISLPGAFTPTCSTKMIPG-Y--EEEYDYFIKENNFDDIYCITNNDIYVLKSWFKSMD 102 (182)
T ss_dssp TTCEEEEEECSCTTCHHHHHTHHHH-H--HHTHHHHHTTSCCSEEEEEESSCHHHHHHHHHHTT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHH-H--HHHHHHHHHhCCCcEEEEEeCCCHHHHHHHHHHcC
Confidence 5789888887 45788887 2 322 1 2334555 45566 4788888876543 3444444
No 342
>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A*
Probab=55.44 E-value=18 Score=33.36 Aligned_cols=45 Identities=16% Similarity=0.305 Sum_probs=36.9
Q ss_pred CCchhhHHHHHhhhccc------cCCCHHHHHHHHHHcCCCHHHHHHHHHh
Q 021440 3 SESIDKESRISSFLEIA------VGASGVTAIECLQATSWKLDEAILLFFA 47 (312)
Q Consensus 3 ~~s~~~~~~i~~F~~iT------t~~~~~~A~~~Le~~~wdLe~Av~lff~ 47 (312)
.++.++.+.|.+|.+.- ...|...-.+||.+++||++.|...+-.
T Consensus 34 ~lt~~q~~~l~~lR~~l~~~~~~~~~dD~~LLRFLRArkfdv~kA~~mL~~ 84 (320)
T 3q8g_A 34 NLTKEQEEALLQFRSILLEKNYKERLDDSTLLRFLRARKFDINASVEMFVE 84 (320)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCCSSCSHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 35778888999887652 2468889999999999999999998854
No 343
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=53.14 E-value=26 Score=30.47 Aligned_cols=47 Identities=4% Similarity=0.111 Sum_probs=34.4
Q ss_pred HHHHh-cCCCCCCeEEEEeCCCCeeEE-----EecCCCChHHHHHHHHHHHhhC
Q 021440 186 KVCSF-YNMDSIPAVLVIDPITGQKIC-----SWCGMINPQPLGEMLLPFMDRS 233 (312)
Q Consensus 186 ~~~~~-Y~~~~~P~i~IIdprTGe~v~-----~~~G~~~~~~fl~~L~~fl~~~ 233 (312)
+.+.. +.+...|+++|+++ .|+.+. ...|+.+++.|.+.|.+.+...
T Consensus 161 ~~a~~~~GV~GtPtfvv~~~-nG~~~~Ga~~~~~~G~~~~e~l~~~I~~~l~~~ 213 (226)
T 3f4s_A 161 SLAINKLGITAVPIFFIKLN-DDKSYIEHNKVKHGGYKELKYFTNVIDKLYGKA 213 (226)
T ss_dssp HHHHHHHCCCSSCEEEEEEC-CTTCCCCGGGGEEESCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCcCCEEEEEcC-CCEEeeCCCCcccccccCHHHHHHHHHHHHhcC
Confidence 45667 99999999999874 476541 1235555999999998887654
No 344
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=52.57 E-value=21 Score=29.70 Aligned_cols=43 Identities=14% Similarity=0.273 Sum_probs=33.7
Q ss_pred HHHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021440 185 WKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (312)
Q Consensus 185 ~~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~ 231 (312)
.+.+..+.+...|+++| .|+.+....|..+.+.|.+.|...++
T Consensus 142 ~~~a~~~gv~GtPtfvv----ng~~~v~~~Ga~~~e~~~~~i~~ll~ 184 (185)
T 3feu_A 142 KMLSEKSGISSVPTFVV----NGKYNVLIGGHDDPKQIADTIRYLLE 184 (185)
T ss_dssp HHHHHHHTCCSSSEEEE----TTTEEECGGGCSSHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCccCEEEE----CCEEEEecCCCCCHHHHHHHHHHHHh
Confidence 35667889999999986 47765445899999999998887664
No 345
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=52.19 E-value=11 Score=31.62 Aligned_cols=41 Identities=10% Similarity=-0.089 Sum_probs=30.6
Q ss_pred cCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc---cEEEEEeccCC
Q 021440 135 QDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV---NFIFWQEYDDT 181 (312)
Q Consensus 135 ~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~---nFIfwq~~~ds 181 (312)
..|..+|.+.+.+|..|..+.. .+.+++++ +++|..+....
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~------~l~~~~~~~~~~v~~~~~p~~~ 66 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEP------VLSKHAKSFKDDMYLRTEHVVW 66 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHH------HHHHHHTTCCTTEEEEEEECCC
T ss_pred CCCcEEEEEECCCChhHHHHHH------HHHHHHHHCCCCeEEEEecCCC
Confidence 3688999999999999999975 44455443 57777776654
No 346
>1p3q_Q VPS9P, vacuolar protein sorting-associated protein VPS9; trafficking, post translational modification, mono- ubiquitination; 1.70A {Saccharomyces cerevisiae} SCOP: a.5.2.4 PDB: 1mn3_A
Probab=52.16 E-value=6.9 Score=27.25 Aligned_cols=41 Identities=2% Similarity=0.108 Sum_probs=32.0
Q ss_pred hhHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHh
Q 021440 7 DKESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFA 47 (312)
Q Consensus 7 ~~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~ 47 (312)
++.+.|.++.++=-.-|.++=+..|++++||++.||+..+.
T Consensus 11 e~~~~~~~L~~MFP~lD~evI~~Vl~a~~G~~~~~IdaLLq 51 (54)
T 1p3q_Q 11 ERKDTLNTLQNMFPDMDPSLIEDVCIAAASRIGPCVDALLS 51 (54)
T ss_dssp HHHHHHHHHHHHSTTSCHHHHHHHHHHSCC--CGGGC----
T ss_pred HHHHHHHHHHHHcccCCHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 46778999999988899999999999999999999987765
No 347
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=51.24 E-value=37 Score=26.96 Aligned_cols=62 Identities=10% Similarity=0.071 Sum_probs=36.9
Q ss_pred HHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhcc------EEEEEeccCC--hhHHHHH-HhcCCCCCCe
Q 021440 128 AKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVN------FIFWQEYDDT--SEGWKVC-SFYNMDSIPA 198 (312)
Q Consensus 128 A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~n------FIfwq~~~ds--~EG~~~~-~~Y~~~~~P~ 198 (312)
.+....+.++ |.||- .++|..|.+. ++++++. |...-++.+. .+-..+. ..+...++|.
T Consensus 6 ~~~~ii~~~~-Vvvys-k~~Cp~C~~a----------k~lL~~~~~~~v~~~~idid~~~d~~~~~~~l~~~~G~~tVP~ 73 (127)
T 3l4n_A 6 EYSLILDLSP-IIIFS-KSTCSYSKGM----------KELLENEYQFIPNYYIIELDKHGHGEELQEYIKLVTGRGTVPN 73 (127)
T ss_dssp HHHHHHTSCS-EEEEE-CTTCHHHHHH----------HHHHHHHEEEESCCEEEEGGGSTTHHHHHHHHHHHHSCCSSCE
T ss_pred HHHHHHccCC-EEEEE-cCCCccHHHH----------HHHHHHhcccCCCcEEEEecCCCCHHHHHHHHHHHcCCCCcce
Confidence 3444555555 55554 4789999877 4566653 5555555432 2333433 4557789999
Q ss_pred EEE
Q 021440 199 VLV 201 (312)
Q Consensus 199 i~I 201 (312)
|.|
T Consensus 74 IfI 76 (127)
T 3l4n_A 74 LLV 76 (127)
T ss_dssp EEE
T ss_pred EEE
Confidence 964
No 348
>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1
Probab=51.16 E-value=25 Score=31.46 Aligned_cols=44 Identities=14% Similarity=0.161 Sum_probs=35.3
Q ss_pred CchhhHHHHHhhhccc------cCCCHHHHHHHHHHcCCCHHHHHHHHHh
Q 021440 4 ESIDKESRISSFLEIA------VGASGVTAIECLQATSWKLDEAILLFFA 47 (312)
Q Consensus 4 ~s~~~~~~i~~F~~iT------t~~~~~~A~~~Le~~~wdLe~Av~lff~ 47 (312)
++.++.+.|.+|.+.- ...|...-.+||.+++||++.|...+-.
T Consensus 26 l~~~q~~~l~~lr~~l~~~~~~~~~dd~~LlRFLrarkfdv~~A~~~l~~ 75 (296)
T 1aua_A 26 LDSAQEKALAELRKLLEDAGFIERLDDSTLLRFLRARKFDVQLAKEMFEN 75 (296)
T ss_dssp CCTTHHHHHHHHHHHHHHTTCCSSCSHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHHcCCCHHHHHHHHHH
Confidence 4667888888886532 2368899999999999999999988744
No 349
>2cos_A Serine/threonine protein kinase LATS2; UBA domain, structure genomics, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.5.2.1
Probab=50.61 E-value=19 Score=25.00 Aligned_cols=41 Identities=15% Similarity=0.126 Sum_probs=33.3
Q ss_pred chhhHHHHHhhhccccCCCHHHHHHHHHHcCC-CHHHHHHHHHh
Q 021440 5 SIDKESRISSFLEIAVGASGVTAIECLQATSW-KLDEAILLFFA 47 (312)
Q Consensus 5 s~~~~~~i~~F~~iTt~~~~~~A~~~Le~~~w-dLe~Av~lff~ 47 (312)
+......+.+.+++ |.+.+.|..-|..+|. .|+.|+.-..-
T Consensus 6 ~~vn~qmlq~L~eM--GFd~erae~Alk~Tg~~Gle~AmewL~k 47 (54)
T 2cos_A 6 SGVNRQMLQELVNA--GCDQEMAGRALKQTGSRSIEAALEYISK 47 (54)
T ss_dssp CSCCHHHHHHHHHH--HCCHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred chhHHHHHHHHHHc--CCCHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 34456678999999 9999999999999986 69999875543
No 350
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=48.61 E-value=5.1 Score=34.31 Aligned_cols=54 Identities=6% Similarity=-0.120 Sum_probs=33.5
Q ss_pred CCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCC---hhHHHHHH
Q 021440 136 DKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDT---SEGWKVCS 189 (312)
Q Consensus 136 ~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds---~EG~~~~~ 189 (312)
.|..||.+.+.||..|..|.-.+=-.+.+.+-+..+..|..++++. +.+...++
T Consensus 113 ~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~v~~~~~~v~~~~~~~~~~~a~ 169 (197)
T 1un2_A 113 GAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFMGGDLGKDLTQ 169 (197)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTTCCEEEEECSSSSHHHHHHHHH
T ss_pred CCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCCCEEEEeccCcCCccchHHHHH
Confidence 4789999999999999999643212234444444455566665553 33444444
No 351
>2lbc_A Ubiquitin carboxyl-terminal hydrolase 13; tandem UBA of USP13; NMR {Homo sapiens}
Probab=46.64 E-value=20 Score=28.48 Aligned_cols=40 Identities=18% Similarity=0.086 Sum_probs=35.0
Q ss_pred HHHHHhhhccccCCCHHHHHHHHHHcCC-CHHHHHHHHHhcCC
Q 021440 9 ESRISSFLEIAVGASGVTAIECLQATSW-KLDEAILLFFAVNE 50 (312)
Q Consensus 9 ~~~i~~F~~iTt~~~~~~A~~~Le~~~w-dLe~Av~lff~~~~ 50 (312)
.+.|.+.+++ |=+...|+.-|..+++ |++.|++-.+++.+
T Consensus 4 ~~~l~~L~~M--GF~~~~a~~AL~~t~n~~~e~A~~wL~~~~~ 44 (126)
T 2lbc_A 4 ESSVMQLAEM--GFPLEACRKAVYFTGNMGAEVAFNWIIVHME 44 (126)
T ss_dssp THHHHHHHTT--SSCCHHHHHHHHHHTSCCHHHHHHHHHHGGG
T ss_pred HHHHHHHHHc--CCCHHHHHHHHHHcCCCCHHHHHHHHHHhcc
Confidence 4578899998 8999999999999976 99999999888754
No 352
>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E*
Probab=46.54 E-value=30 Score=32.51 Aligned_cols=44 Identities=16% Similarity=0.185 Sum_probs=35.2
Q ss_pred CchhhHHHHHhhhccc-------cCCCHHHHHHHHHHcCCCHHHHHHHHHh
Q 021440 4 ESIDKESRISSFLEIA-------VGASGVTAIECLQATSWKLDEAILLFFA 47 (312)
Q Consensus 4 ~s~~~~~~i~~F~~iT-------t~~~~~~A~~~Le~~~wdLe~Av~lff~ 47 (312)
++.++.+.|.+|.+.- --.|...-.+||.+++||++.|...+-.
T Consensus 8 l~~~q~~~l~~lr~~l~~~~~~l~~~dD~~LlRFLrarkfdv~~A~~~l~~ 58 (403)
T 1olm_A 8 LSPRQKEALAKFRENVQDVLPALPNPDDYFLLRWLRARSFDLQKSEAMLRK 58 (403)
T ss_dssp CCHHHHHHHHHHHHHHGGGGGGSSCCCHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhhccCCCCCChhHHHHHHHhcCCCHHHHHHHHHH
Confidence 4677888888885521 2468899999999999999999998754
No 353
>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A*
Probab=46.41 E-value=11 Score=32.99 Aligned_cols=45 Identities=18% Similarity=0.115 Sum_probs=29.9
Q ss_pred CCchhhHHHHHhhhccc---------cCCCHHHHHHHHHHcCCCHHHHHHHHHh
Q 021440 3 SESIDKESRISSFLEIA---------VGASGVTAIECLQATSWKLDEAILLFFA 47 (312)
Q Consensus 3 ~~s~~~~~~i~~F~~iT---------t~~~~~~A~~~Le~~~wdLe~Av~lff~ 47 (312)
++|..+.+.|.+|.+.. ...|.....+||.+++||++.|...+-.
T Consensus 3 ~ls~~~~~~l~~lr~~l~~~~~~~~~~~~dd~~LlRFLra~k~dv~~A~~~l~~ 56 (262)
T 1r5l_A 3 HMSPLLQPGLAALRRRAREAGVPLAPLPLTDSFLLRFLRARDFDLDLAWRLLKN 56 (262)
T ss_dssp ------CTTHHHHHHHHHHHTCCCSSSCCCHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHhCCcccCCCCCCHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 34556666666665432 1358899999999999999999997744
No 354
>1q0v_A Hydrophilic protein; has cysteine rich putative zinc finger esential for function;...; stable, non-interacting alpha-helices; NMR {Saccharomyces cerevisiae} SCOP: j.105.1.1 PDB: 1q0w_A
Probab=46.17 E-value=48 Score=24.86 Aligned_cols=18 Identities=17% Similarity=0.171 Sum_probs=15.1
Q ss_pred ChHHHHHHHHHHhhHhhc
Q 021440 254 RNIKDCCSALAASMETIK 271 (312)
Q Consensus 254 ~~~eql~~Ai~~Sl~~~~ 271 (312)
-++++|.+||++||.+..
T Consensus 53 deD~DLKAAIaASLrd~E 70 (81)
T 1q0v_A 53 EEDPDLKAAIQESLREAE 70 (81)
T ss_dssp CSCHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHH
Confidence 346999999999998765
No 355
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=44.77 E-value=46 Score=28.40 Aligned_cols=43 Identities=16% Similarity=0.311 Sum_probs=33.1
Q ss_pred HHH-HhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhCCC
Q 021440 186 KVC-SFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRSPR 235 (312)
Q Consensus 186 ~~~-~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~~~~ 235 (312)
+.+ ..+.+...|+++| .|+. +.|..+++.|.+.|.+.+.++-.
T Consensus 158 ~~a~~~~GV~GtPtfvv----ng~~---~~G~~~~e~l~~~i~~~~~~~~~ 201 (205)
T 3gmf_A 158 DEAINQYNVSGTPSFMI----DGIL---LAGTHDWASLRPQILARLNEGHH 201 (205)
T ss_dssp HHHHHHHCCCSSSEEEE----TTEE---CTTCCSHHHHHHHHHHHHTC---
T ss_pred HHHHHHcCCccCCEEEE----CCEE---EeCCCCHHHHHHHHHHHhhcccc
Confidence 455 7789999999986 3663 68999999999999998877644
No 356
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=44.59 E-value=48 Score=25.02 Aligned_cols=108 Identities=12% Similarity=0.116 Sum_probs=61.2
Q ss_pred CCccccccccHHHHHHHHHHcCC-eEEEEeecCCCc----cc-----chhhcccCCCHHHHHHhhccEEEEEeccCChhH
Q 021440 115 PPFHVMFNGSFEKAKDAALAQDK-WLLVNLQSTKEF----SS-----LMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEG 184 (312)
Q Consensus 115 PP~~l~~~gsf~~A~~~Ak~~~K-wLLVniq~~~~f----~c-----~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG 184 (312)
++..+-...+..+|+..-++.+. ++.| +.+...+ .- ..+....+.+..|.+++..+++....+..-.+.
T Consensus 17 ~~~~v~~~~~~~~a~~~~~~~~~~~~~V-vd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~ 95 (138)
T 2p9m_A 17 NVITAKRHEGVVEAFEKMLKYKISSLPV-IDDENKVIGIVTTTDIGYNLIRDKYTLETTIGDVMTKDVITIHEDASILEA 95 (138)
T ss_dssp SCCCEETTSBHHHHHHHHHHHTCCEEEE-ECTTCBEEEEEEHHHHHHHHTTTCCCSSCBHHHHSCSSCCCEETTSBHHHH
T ss_pred CceEECCCCcHHHHHHHHHHCCCcEEEE-ECCCCeEEEEEEHHHHHHHHHhhcccCCcCHHHHhCCCcEEECCCCCHHHH
Confidence 33334446689999887766543 4433 3322222 11 122223456778999998887776654444455
Q ss_pred HHHHHhcC--CCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHH
Q 021440 185 WKVCSFYN--MDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLP 228 (312)
Q Consensus 185 ~~~~~~Y~--~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~ 228 (312)
.+....++ ...+.++.|+|. .|+. .|.++..+++..+.+
T Consensus 96 ~~~~~~~~~~~~~~~~l~Vvd~-~g~~----~Giit~~dll~~~~~ 136 (138)
T 2p9m_A 96 IKKMDISGKKEEIINQLPVVDK-NNKL----VGIISDGDIIRTISK 136 (138)
T ss_dssp HHHHTCC-----CCCEEEEECT-TSBE----EEEEEHHHHHHHHHH
T ss_pred HHHHHhcCCccccccEEEEECC-CCeE----EEEEEHHHHHHHHHh
Confidence 44443333 011678889985 4653 466788888876643
No 357
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=44.13 E-value=66 Score=24.53 Aligned_cols=65 Identities=11% Similarity=0.152 Sum_probs=38.0
Q ss_pred HHHHHHHHHHcCCeEEEEeec----CCCcccchhhcccCCCHHHHHHhhc---cEEEEEeccCChhHHH-HHHhcCCCCC
Q 021440 125 FEKAKDAALAQDKWLLVNLQS----TKEFSSLMLNRDTWGNEAVSQIISV---NFIFWQEYDDTSEGWK-VCSFYNMDSI 196 (312)
Q Consensus 125 f~~A~~~Ak~~~KwLLVniq~----~~~f~c~~lnRDvw~~~~V~~~i~~---nFIfwq~~~ds~EG~~-~~~~Y~~~~~ 196 (312)
..+.++..-++++ |+|+.-+ ++|..|+.. ++++++ .|...-++.+ ++... +.......++
T Consensus 5 ~~~~v~~~i~~~~-Vvlf~kg~~~~~~Cp~C~~a----------k~~L~~~gi~y~~~di~~d-~~~~~~l~~~~g~~tv 72 (111)
T 3zyw_A 5 LNLRLKKLTHAAP-CMLFMKGTPQEPRCGFSKQM----------VEILHKHNIQFSSFDIFSD-EEVRQGLKAYSSWPTY 72 (111)
T ss_dssp HHHHHHHHHTSSS-EEEEESBCSSSBSSHHHHHH----------HHHHHHTTCCCEEEEGGGC-HHHHHHHHHHHTCCSS
T ss_pred HHHHHHHHHhcCC-EEEEEecCCCCCcchhHHHH----------HHHHHHcCCCeEEEECcCC-HHHHHHHHHHHCCCCC
Confidence 3445555555554 4555542 689888877 445544 3666555443 44433 4445567889
Q ss_pred CeEEE
Q 021440 197 PAVLV 201 (312)
Q Consensus 197 P~i~I 201 (312)
|.|.|
T Consensus 73 P~ifi 77 (111)
T 3zyw_A 73 PQLYV 77 (111)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 99864
No 358
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=42.53 E-value=1.4e+02 Score=26.94 Aligned_cols=81 Identities=10% Similarity=0.105 Sum_probs=47.0
Q ss_pred EEEEeecCCCcccchhhcccCCCHHHHHH-hhccEE--EEEec-cC-------------ChhHHHHHHhcCCCCC--CeE
Q 021440 139 LLVNLQSTKEFSSLMLNRDTWGNEAVSQI-ISVNFI--FWQEY-DD-------------TSEGWKVCSFYNMDSI--PAV 199 (312)
Q Consensus 139 LLVniq~~~~f~c~~lnRDvw~~~~V~~~-i~~nFI--fwq~~-~d-------------s~EG~~~~~~Y~~~~~--P~i 199 (312)
.+.-+.+++|..|..-.+-+ .+. .+.++| -|.++ .+ ..+...+...|...+. |.|
T Consensus 45 ~VelyTs~gCp~C~~Ak~lL------~~~~~~~~vi~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~~~~G~~tVyTPqI 118 (270)
T 2axo_A 45 VVELFTSQGCASCPPADEAL------RKMIQKGDVVGLSYHVDYWNYLGWTDSLASKENTERQYGYMRALGRNGVYTPQA 118 (270)
T ss_dssp EEEEEECTTCTTCHHHHHHH------HHHHHHTSSEEEEEECSTTCSSSSCCTTCCHHHHHHHHHHHHHTTCSCCCSSEE
T ss_pred EEEEEeCCCCCChHHHHHHH------HHhhccCCeeeEEEEEEEecccccccchhhhhhhHHHHHHHHHhCCCcccCCEE
Confidence 44445567999999764332 111 112444 23332 22 3345568889988888 997
Q ss_pred EEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021440 200 LVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (312)
Q Consensus 200 ~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~ 232 (312)
+| | |+.. ..| .+++.+.+.|.+....
T Consensus 119 ~I-n---g~~~--v~G-~d~~~l~~~l~~~~~~ 144 (270)
T 2axo_A 119 IL-N---GRDH--VKG-ADVRGIYDRLDAFKRE 144 (270)
T ss_dssp EE-T---TTEE--EET-TCHHHHHHHHHHHHHT
T ss_pred EE-C---CEEe--ecC-CCHHHHHHHHHHhhcc
Confidence 75 4 4421 234 3678888888776544
No 359
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=41.63 E-value=81 Score=24.79 Aligned_cols=65 Identities=8% Similarity=0.044 Sum_probs=45.0
Q ss_pred CCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021440 159 WGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (312)
Q Consensus 159 w~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~ 232 (312)
+.+..|.+++..+++....+..-.+..++....+ +..+.|+|. |+ ..|.++..+++..+.+.++.
T Consensus 75 ~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~---~~~lpVvd~--g~----lvGiit~~dil~~~~~~~~~ 139 (160)
T 2o16_A 75 AFETPLFEVMHTDVTSVAPQAGLKESAIYMQKHK---IGCLPVVAK--DV----LVGIITDSDFVTIAINLLEL 139 (160)
T ss_dssp -CCCBHHHHSCSCEEEBCTTSBHHHHHHHHHHTT---CSCEEEEET--TE----EEEEECHHHHHHHHHHHHHH
T ss_pred hcccCHHHHhcCCCeEECCCCCHHHHHHHHHHhC---CCEEEEEEC--CE----EEEEEEHHHHHHHHHHHhcc
Confidence 4566788888888877765555566666666554 456778884 65 34778899999888876643
No 360
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=40.77 E-value=44 Score=23.79 Aligned_cols=45 Identities=18% Similarity=0.156 Sum_probs=27.5
Q ss_pred CCcccchhhcccCCCHHHHHHhhc---cEEEEEecc----CChhH-HHHHHhcCCC-----CCCeEEE
Q 021440 147 KEFSSLMLNRDTWGNEAVSQIISV---NFIFWQEYD----DTSEG-WKVCSFYNMD-----SIPAVLV 201 (312)
Q Consensus 147 ~~f~c~~lnRDvw~~~~V~~~i~~---nFIfwq~~~----ds~EG-~~~~~~Y~~~-----~~P~i~I 201 (312)
+|..|+.. ++++++ .|-+.-++. ..++. ..+...+... ++|.|.|
T Consensus 13 ~Cp~C~~a----------k~~L~~~gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP~v~i 70 (87)
T 1aba_A 13 KCGPCDNA----------KRLLTVKKQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQVFA 70 (87)
T ss_dssp CCHHHHHH----------HHHHHHTTCCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCEEEC
T ss_pred cCccHHHH----------HHHHHHcCCCEEEEEeeccccccCHHHHHHHHHHhCCCCCCCCccCEEEE
Confidence 78888766 455554 355555441 12333 3466677777 8998874
No 361
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=40.10 E-value=65 Score=24.50 Aligned_cols=104 Identities=13% Similarity=0.124 Sum_probs=60.8
Q ss_pred ccccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccC----------------------CCHHHHHHhhccEEEEE
Q 021440 119 VMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTW----------------------GNEAVSQIISVNFIFWQ 176 (312)
Q Consensus 119 l~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw----------------------~~~~V~~~i~~nFIfwq 176 (312)
+-...+..+|+..-++.+-.-++-+.....+---.--+|+. .+..|.+++..+++...
T Consensus 20 v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~ 99 (152)
T 4gqw_A 20 VKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLSKTNGKLVGDLMTPAPLVVE 99 (152)
T ss_dssp BCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHTTCC----CCHHHHHHHTC-----CCBHHHHSEESCCCEE
T ss_pred ECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHHHhhcccCcccchHHHHHHHHHhccccHHHhcCCCceEEC
Confidence 34466788988877766533333333322221111122222 23568888888887766
Q ss_pred eccCChhHHHHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHH
Q 021440 177 EYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFM 230 (312)
Q Consensus 177 ~~~ds~EG~~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl 230 (312)
.+..-.+..++...++ +.++.|+|. .|+. .|.++..+++..+.+..
T Consensus 100 ~~~~l~~a~~~~~~~~---~~~l~Vvd~-~g~~----~Giit~~dil~~~~~~~ 145 (152)
T 4gqw_A 100 EKTNLEDAAKILLETK---YRRLPVVDS-DGKL----VGIITRGNVVRAALQIK 145 (152)
T ss_dssp SSSBHHHHHHHHHHSS---CCEEEEECT-TSBE----EEEEEHHHHHHHHHC--
T ss_pred CCCcHHHHHHHHHHCC---CCEEEEECC-CCcE----EEEEEHHHHHHHHHhcc
Confidence 5555566666665554 577888884 4663 46678888888776543
No 362
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=39.53 E-value=55 Score=27.17 Aligned_cols=41 Identities=15% Similarity=0.167 Sum_probs=31.0
Q ss_pred HHHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021440 185 WKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (312)
Q Consensus 185 ~~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~ 232 (312)
.+.+..+.+...|+++| .|+.+ +.|. +++.|++.|...+++
T Consensus 144 ~~~a~~~gv~gtPt~vv----ng~~~--~~~~-~~e~l~~~i~~ll~k 184 (193)
T 3hz8_A 144 QELTETFQIDGVPTVIV----GGKYK--VEFA-DWESGMNTIDLLADK 184 (193)
T ss_dssp HHHHHHTTCCSSSEEEE----TTTEE--ECCS-SHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCcCCEEEE----CCEEE--ecCC-CHHHHHHHHHHHHHH
Confidence 45667889999999986 36654 3455 899999988887754
No 363
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=38.51 E-value=47 Score=27.77 Aligned_cols=57 Identities=2% Similarity=-0.291 Sum_probs=33.1
Q ss_pred cCCeEEEEeec-CCCcccchhhcccCCCHHHHHHhhccE-EEEEeccCChhHH-HHHHhcCC
Q 021440 135 QDKWLLVNLQS-TKEFSSLMLNRDTWGNEAVSQIISVNF-IFWQEYDDTSEGW-KVCSFYNM 193 (312)
Q Consensus 135 ~~KwLLVniq~-~~~f~c~~lnRDvw~~~~V~~~i~~nF-Ifwq~~~ds~EG~-~~~~~Y~~ 193 (312)
.+||++++++- .+++.|..=-+.. ++...+|-+.+. .++.++.|++... +++..+.+
T Consensus 41 ~gk~vVL~fyP~~fTp~Ct~e~~~f--~~~~~ef~~~gv~~VigIS~D~~~~~~~w~~~~~~ 100 (171)
T 2xhf_A 41 RGRKGILFSVVGAFVPGSNNHIPEY--LSLYDKFKEEGYHTIACIAVNDPFVMAAWGKTVDP 100 (171)
T ss_dssp TTSEEEEEECSCTTCTTTTSSHHHH--HHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHHCT
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHH--HHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcCC
Confidence 57898888874 4666664322111 123344555577 4888888887544 45555544
No 364
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=38.44 E-value=81 Score=24.85 Aligned_cols=66 Identities=9% Similarity=0.187 Sum_probs=44.1
Q ss_pred CHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhCC
Q 021440 161 NEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRSP 234 (312)
Q Consensus 161 ~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~~~ 234 (312)
+..|.++++.+++....+..-.+..+... -..+.++.|+|. .|+. .|.++..+++..+........
T Consensus 97 ~~~v~~~m~~~~~~v~~~~~l~~a~~~m~---~~~~~~lpVvd~-~g~~----vGiit~~dil~~~~~~~~~~~ 162 (180)
T 3sl7_A 97 GKVVGDLMTPSPLVVRDSTNLEDAARLLL---ETKFRRLPVVDA-DGKL----IGILTRGNVVRAALQIKRNAD 162 (180)
T ss_dssp TCBHHHHSEESCCCEETTSBHHHHHHHHT---TSTTCEEEEECT-TCBE----EEEEEHHHHHHHHHHHHHTC-
T ss_pred cccHHHHhCCCceEeCCCCcHHHHHHHHH---HcCCCEEEEECC-CCeE----EEEEEHHHHHHHHHHHhhhhh
Confidence 45688888888776655443344444443 345778889984 4664 477889999999888765544
No 365
>2d3g_P Ubiquitin interacting motif from hepatocyte growth factor-regulated tyrosine kinase...; protein-protein complex, UIM and ubiquitin; 1.70A {Bos taurus}
Probab=38.43 E-value=21 Score=21.01 Aligned_cols=16 Identities=25% Similarity=0.090 Sum_probs=12.4
Q ss_pred hHHHHHHHHHHhhHhh
Q 021440 255 NIKDCCSALAASMETI 270 (312)
Q Consensus 255 ~~eql~~Ai~~Sl~~~ 270 (312)
++|++++||+-|+.+.
T Consensus 3 EeEEl~LAlAlS~sEa 18 (26)
T 2d3g_P 3 EEEELQLALALSQSEA 18 (26)
T ss_pred hHHHHHHHHHHHHHHH
Confidence 5578899998888654
No 366
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=37.72 E-value=60 Score=27.35 Aligned_cols=41 Identities=10% Similarity=0.154 Sum_probs=33.0
Q ss_pred HHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhC
Q 021440 186 KVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRS 233 (312)
Q Consensus 186 ~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~~ 233 (312)
+.+..+.+...|+++| .|+. +.|..+++.|.+.|.+.+.+.
T Consensus 154 ~~a~~~gV~gtPtfvv----nG~~---~~G~~~~e~l~~~i~~~~~~~ 194 (202)
T 3gha_A 154 DLNQKMNIQATPTIYV----NDKV---IKNFADYDEIKETIEKELKGK 194 (202)
T ss_dssp HHHHHTTCCSSCEEEE----TTEE---CSCTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHcCCCcCCEEEE----CCEE---ecCCCCHHHHHHHHHHHHHhh
Confidence 5667889999999987 3664 578899999999998887654
No 367
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=37.34 E-value=54 Score=25.69 Aligned_cols=104 Identities=12% Similarity=0.059 Sum_probs=60.4
Q ss_pred ccccccHHHHHHHHHHcCCeEEEEeecCCCc----ccchhhc----------ccCCCHHHHHHhhccEEEEEeccCChhH
Q 021440 119 VMFNGSFEKAKDAALAQDKWLLVNLQSTKEF----SSLMLNR----------DTWGNEAVSQIISVNFIFWQEYDDTSEG 184 (312)
Q Consensus 119 l~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f----~c~~lnR----------Dvw~~~~V~~~i~~nFIfwq~~~ds~EG 184 (312)
+--..+..+|+..-++.+-.-++-+.+...+ .-..+-+ .-+.+..|.+++..+++....+..-.+.
T Consensus 29 v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a 108 (159)
T 1yav_A 29 VQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFGLERIEFEKLDQITVEEVMLTDIPRLHINDPIMKG 108 (159)
T ss_dssp EETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHBCSSSBCGGGTTTSBHHHHSBCSCCEEETTSBHHHH
T ss_pred ECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhhhhcccchhhhccCCHHHhcCCCCceEcCCCCHHHH
Confidence 3346678898887776554333333332221 1111111 1155677899998888777655444555
Q ss_pred HHHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021440 185 WKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (312)
Q Consensus 185 ~~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~ 232 (312)
.+....+ +++.|+|. .|+. .|.++..+++..+...+..
T Consensus 109 ~~~m~~~-----~~lpVvd~-~g~~----vGiit~~dil~~~~~~~~~ 146 (159)
T 1yav_A 109 FGMVINN-----GFVCVEND-EQVF----EGIFTRRVVLKELNKHIRS 146 (159)
T ss_dssp HHHTTTC-----SEEEEECT-TCBE----EEEEEHHHHHHHHHHHC--
T ss_pred HHHHHhC-----CEEEEEeC-CCeE----EEEEEHHHHHHHHHHHHHh
Confidence 5544333 23888885 4664 4778889998888776544
No 368
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=37.33 E-value=29 Score=26.91 Aligned_cols=105 Identities=12% Similarity=0.149 Sum_probs=61.1
Q ss_pred cccccccHHHHHHHHHHcC-CeEEEEeecCCCc----ccchh----------hcccCCCHHHHHHhhccEEEEEeccCCh
Q 021440 118 HVMFNGSFEKAKDAALAQD-KWLLVNLQSTKEF----SSLML----------NRDTWGNEAVSQIISVNFIFWQEYDDTS 182 (312)
Q Consensus 118 ~l~~~gsf~~A~~~Ak~~~-KwLLVniq~~~~f----~c~~l----------nRDvw~~~~V~~~i~~nFIfwq~~~ds~ 182 (312)
-+-...+..+|+..-.+.+ ..+.|- ...+.+ .-.-+ ....+.+..|.+++..+++....+..-.
T Consensus 29 ~v~~~~~l~~a~~~~~~~~~~~~pVv-d~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~ 107 (150)
T 3lqn_A 29 HVQIGNGLEHALLVLVKSGYSAIPVL-DPMYKLHGLISTAMILDGILGLERIEFERLEEMKVEQVMKQDIPVLKLEDSFA 107 (150)
T ss_dssp CBCTTSBHHHHHHHHHHHTCSEEEEE-CTTCBEEEEEEHHHHHHHTBCSSSBCGGGGGGCBGGGTCBSSCCEEETTCBHH
T ss_pred EECCCCcHHHHHHHHHHcCCcEEEEE-CCCCCEEEEEEHHHHHHHHHhhcccchhHHhcCCHHHHhcCCCceeCCCCCHH
Confidence 3444667889888766554 444433 222221 11111 1122345567777777777776655556
Q ss_pred hHHHHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhC
Q 021440 183 EGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRS 233 (312)
Q Consensus 183 EG~~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~~ 233 (312)
+..++...+++ +.|+|. .|+. .|.++..+++..+.+.+.+.
T Consensus 108 ~a~~~~~~~~~-----l~Vvd~-~g~~----~Giit~~dil~~l~~~~~~~ 148 (150)
T 3lqn_A 108 KALEMTIDHPF-----ICAVNE-DGYF----EGILTRRAILKLLNKKVRQH 148 (150)
T ss_dssp HHHHHHHHCSE-----EEEECT-TCBE----EEEEEHHHHHHHHHHHC---
T ss_pred HHHHHHHhCCE-----EEEECC-CCcE----EEEEEHHHHHHHHHHHhHhh
Confidence 77766665542 788884 4653 47788999999888776543
No 369
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=36.34 E-value=2e+02 Score=24.52 Aligned_cols=95 Identities=9% Similarity=0.085 Sum_probs=56.7
Q ss_pred cHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEEEe
Q 021440 124 SFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVID 203 (312)
Q Consensus 124 sf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IId 203 (312)
+-+++...-+....|++.++.+.....+..+ ..+.+-++.++.|+... +..++..|++.. |.|++.-
T Consensus 13 s~~~~~~~l~~~~v~vvgff~~~~~~~~~~f-------~~~A~~lr~~~~F~~~~-----~~~v~~~~~~~~-p~i~~fk 79 (252)
T 2h8l_A 13 TEEEFKKFISDKDASIVGFFDDSFSEAHSEF-------LKAASNLRDNYRFAHTN-----VESLVNEYDDNG-EGIILFR 79 (252)
T ss_dssp SHHHHHHHHTSSSCEEEEEESCTTSHHHHHH-------HHHHHHTTTTSCEEEEC-----CHHHHHHHCSSS-EEEEEEC
T ss_pred CHHHHHHHhhcCCeEEEEEECCCCChHHHHH-------HHHHHhcccCcEEEEEC-----hHHHHHHhCCCC-CcEEEEc
Confidence 3444444444556677777765322233333 24566677888888763 244888899886 9988887
Q ss_pred CC-----CCeeEEEe-cCCCChHHHHHHHHHHHhhCCC
Q 021440 204 PI-----TGQKICSW-CGMINPQPLGEMLLPFMDRSPR 235 (312)
Q Consensus 204 pr-----TGe~v~~~-~G~~~~~~fl~~L~~fl~~~~~ 235 (312)
|. -.+....+ .|..+.++ |.+|+..+.+
T Consensus 80 ~~~~~~kf~e~~~~y~~g~~~~~~----l~~fi~~~~~ 113 (252)
T 2h8l_A 80 PSHLTNKFEDKTVAYTEQKMTSGK----IKKFIQENIF 113 (252)
T ss_dssp CGGGCCTTSCSEEECCCSSCCHHH----HHHHHHHHSS
T ss_pred chhhcccccccccccCCCCcCHHH----HHHHHHhccc
Confidence 62 01233356 77666665 6677766544
No 370
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=34.94 E-value=80 Score=22.77 Aligned_cols=62 Identities=11% Similarity=0.115 Sum_probs=33.2
Q ss_pred EEEEeecCCCcccchhhcccCCCHHHHHHhhcc---EEEEEeccCChhHH-HHHHhcC--CCCCCeEEEEeCCCCeeE
Q 021440 139 LLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVN---FIFWQEYDDTSEGW-KVCSFYN--MDSIPAVLVIDPITGQKI 210 (312)
Q Consensus 139 LLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~n---FIfwq~~~ds~EG~-~~~~~Y~--~~~~P~i~IIdprTGe~v 210 (312)
|.|| ..++|..|....+ ...++++++++ |...-++.+ ++.. .+...+. ...+|.|. || |+.+
T Consensus 4 v~ly-~~~~C~~c~~~~~----~~~ak~~L~~~~i~~~~~di~~~-~~~~~~l~~~~g~~~~~vP~if-i~---g~~i 71 (93)
T 1t1v_A 4 LRVY-STSVTGSREIKSQ----QSEVTRILDGKRIQYQLVDISQD-NALRDEMRTLAGNPKATPPQIV-NG---NHYC 71 (93)
T ss_dssp EEEE-ECSSCSCHHHHHH----HHHHHHHHHHTTCCCEEEETTSC-HHHHHHHHHHTTCTTCCSCEEE-ET---TEEE
T ss_pred EEEE-EcCCCCCchhhHH----HHHHHHHHHHCCCceEEEECCCC-HHHHHHHHHHhCCCCCCCCEEE-EC---CEEE
Confidence 4444 4568999942211 12345566553 444444332 3443 4556666 56899885 44 5544
No 371
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=34.70 E-value=39 Score=26.66 Aligned_cols=115 Identities=18% Similarity=0.091 Sum_probs=68.4
Q ss_pred cCCCccccccccHHHHHHHHHHcC-CeEEEEeecCCCc----ccchhh-----cccCCCHHHHHHhhc--cEEEEEeccC
Q 021440 113 YRPPFHVMFNGSFEKAKDAALAQD-KWLLVNLQSTKEF----SSLMLN-----RDTWGNEAVSQIISV--NFIFWQEYDD 180 (312)
Q Consensus 113 frPP~~l~~~gsf~~A~~~Ak~~~-KwLLVniq~~~~f----~c~~ln-----RDvw~~~~V~~~i~~--nFIfwq~~~d 180 (312)
..+|+-+-...+..+|+..-.+.+ ..+.|- .....+ .-.-+- ...+.+..|.+++.. +++....+..
T Consensus 23 m~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vv-d~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~ 101 (159)
T 3fv6_A 23 QSIPVVIHENVSVYDAICTMFLEDVGTLFVV-DRDAVLVGVLSRKDLLRASIGQQELTSVPVHIIMTRMPNITVCRREDY 101 (159)
T ss_dssp CBCCCEEETTSBHHHHHHHHHHHTCSEEEEE-CTTSCEEEEEEHHHHHHHHTSCSCTTTCBGGGTSEETTSCCCBCTTSB
T ss_pred cCCCEEECCCCcHHHHHHHHHHCCCCEEEEE-cCCCcEEEEEeHHHHHHHhhccCcccCcCHHHHHcCCCCcEEECCCCC
Confidence 345654455678999988766554 444443 222222 111121 223445567777776 6665544444
Q ss_pred ChhHHHHHHhcCCCCCCeEEEEeCCCC---eeEEEecCCCChHHHHHHHHHHHhhCCCC
Q 021440 181 TSEGWKVCSFYNMDSIPAVLVIDPITG---QKICSWCGMINPQPLGEMLLPFMDRSPRK 236 (312)
Q Consensus 181 s~EG~~~~~~Y~~~~~P~i~IIdprTG---e~v~~~~G~~~~~~fl~~L~~fl~~~~~~ 236 (312)
-.+..+....++ +.++.|+|. .| + ..|.++..+++..+.++....+..
T Consensus 102 l~~a~~~m~~~~---~~~lpVvd~-~g~~~~----~vGiit~~dil~~l~~~~~~~~~~ 152 (159)
T 3fv6_A 102 VMDIAKHLIEKQ---IDALPVIKD-TDKGFE----VIGRVTKTNMTKILVSLSENEILL 152 (159)
T ss_dssp HHHHHHHHHHHT---CSEEEEEEE-CSSSEE----EEEEEEHHHHHHHHHHHHTTCCC-
T ss_pred HHHHHHHHHHcC---CcEEEEEeC-CCccee----EEEEEEHHHHHHHHHHHhhcchhh
Confidence 455656555554 677888885 34 4 347788999999999998887654
No 372
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=34.23 E-value=28 Score=28.37 Aligned_cols=42 Identities=10% Similarity=0.248 Sum_probs=29.6
Q ss_pred HHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021440 186 KVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (312)
Q Consensus 186 ~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~ 231 (312)
+.+..+.+...|+++| + |+.+....|..+++.|.+.|...+.
T Consensus 153 ~~a~~~gv~gtPt~~i-n---g~~~~~~~g~~~~~~l~~~i~~~l~ 194 (195)
T 3c7m_A 153 ASYDVAKIQGVPAYVV-N---GKYLIYTKSIKSIDAMADLIRELAS 194 (195)
T ss_dssp GHHHHHHHHCSSEEEE-T---TTEEECGGGCCCHHHHHHHHHHHHT
T ss_pred HHHHHcCCCccCEEEE-C---CEEEeccCCCCCHHHHHHHHHHHHh
Confidence 3455677889999754 4 6644333488899999998887764
No 373
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=33.47 E-value=53 Score=26.72 Aligned_cols=40 Identities=13% Similarity=0.208 Sum_probs=28.9
Q ss_pred HHHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021440 185 WKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (312)
Q Consensus 185 ~~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~ 231 (312)
.+++..+.+...|+++| .|+. +.|..+++.|.+.|...+.
T Consensus 139 ~~~a~~~gv~GtPt~vv----nG~~---~~G~~~~~~l~~~i~~~~~ 178 (186)
T 3bci_A 139 KKIAKDNHIKTTPTAFI----NGEK---VEDPYDYESYEKLLKDKIK 178 (186)
T ss_dssp HHHHHHTTCCSSSEEEE----TTEE---CSCTTCHHHHHHHHHC---
T ss_pred HHHHHHcCCCCCCeEEE----CCEE---cCCCCCHHHHHHHHHHHHH
Confidence 35667889999999986 3764 4688899988888877663
No 374
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=31.43 E-value=30 Score=28.79 Aligned_cols=44 Identities=7% Similarity=-0.022 Sum_probs=29.3
Q ss_pred CeEEEEeecCCCcccchhhcccCCCHHHHHHhhc--cEEEEEeccC
Q 021440 137 KWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV--NFIFWQEYDD 180 (312)
Q Consensus 137 KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~--nFIfwq~~~d 180 (312)
+..+|.+.+.||..|..|...+=..+.+++.+.. +|++..+...
T Consensus 15 ~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 60 (189)
T 3l9v_A 15 APAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQGSRMVKYHVSLL 60 (189)
T ss_dssp CCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCTTCCEEEEECSSS
T ss_pred CCEEEEEECCCChhHHHHhHhccchHHHHHhCCCCCEEEEEechhc
Confidence 5678999999999999998764011445444333 4666666553
No 375
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=31.17 E-value=96 Score=26.31 Aligned_cols=66 Identities=11% Similarity=-0.025 Sum_probs=40.4
Q ss_pred ccHHHHHHHHHHc---CCeEEEEeecCCCcccchhhcccCCCHHHHHHhhc---cEEEEEeccCChhHHHHHHhcCCCCC
Q 021440 123 GSFEKAKDAALAQ---DKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISV---NFIFWQEYDDTSEGWKVCSFYNMDSI 196 (312)
Q Consensus 123 gsf~~A~~~Ak~~---~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~---nFIfwq~~~ds~EG~~~~~~Y~~~~~ 196 (312)
.+.+++++.-+.. ..-|.|| ..++|..|++. +.++++ .|...-++.+ ++...+...|.....
T Consensus 153 ~~~~~il~~l~~~~i~~~~i~ly-~~~~Cp~C~~a----------~~~L~~~~i~~~~~~i~~~-~~~~~l~~~~g~~~v 220 (241)
T 1nm3_A 153 SDADTMLKYLAPQHQVQESISIF-TKPGCPFCAKA----------KQLLHDKGLSFEEIILGHD-ATIVSVRAVSGRTTV 220 (241)
T ss_dssp SSHHHHHHHHCTTSCCCCCEEEE-ECSSCHHHHHH----------HHHHHHHTCCCEEEETTTT-CCHHHHHHHTCCSSS
T ss_pred cCHHHHHHHhhhhccccceEEEE-ECCCChHHHHH----------HHHHHHcCCceEEEECCCc-hHHHHHHHHhCCCCc
Confidence 3455555544432 2334444 55799999976 444444 3555544443 445677888888899
Q ss_pred CeEE
Q 021440 197 PAVL 200 (312)
Q Consensus 197 P~i~ 200 (312)
|.|.
T Consensus 221 P~~~ 224 (241)
T 1nm3_A 221 PQVF 224 (241)
T ss_dssp CEEE
T ss_pred CEEE
Confidence 9985
No 376
>4dbg_B Ring finger protein 31; ubiquitin fold, ubiquitination, ligase; 2.71A {Homo sapiens}
Probab=31.02 E-value=38 Score=28.60 Aligned_cols=37 Identities=5% Similarity=0.100 Sum_probs=23.9
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHH
Q 021440 8 KESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLF 45 (312)
Q Consensus 8 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lf 45 (312)
...++...++. +--+.+.+...|..+++|++.|+.+.
T Consensus 102 R~~K~~eL~s~-G~~~~~~~~~aL~~~~Gdv~~Al~eL 138 (162)
T 4dbg_B 102 RRRKVQELQSL-GFGPEEGSLQALFQHGGDVSRALTEL 138 (162)
T ss_dssp HHHHHHHHHHT-TCCGGGTHHHHHHHTTTCHHHHHHHH
T ss_pred HHHHHHHHHhc-CCchHHHHHHHHHHcCCcHHHHHHHH
Confidence 34556666666 66666667777777777777766553
No 377
>3a1q_C Ubiquitin interaction motif-containing protein 1; protein complex, cytoplasm, nucleus, phosphoprotein, UBL conjugation, transcription regulation; 2.20A {Mus musculus}
Probab=30.88 E-value=34 Score=22.41 Aligned_cols=21 Identities=14% Similarity=0.099 Sum_probs=16.5
Q ss_pred CCChHHHHHHHHHHhhHhhcC
Q 021440 252 PQRNIKDCCSALAASMETIKD 272 (312)
Q Consensus 252 ~~~~~eql~~Ai~~Sl~~~~~ 272 (312)
..+++||+.+|++.|-++++.
T Consensus 3 ~mtEEEq~ALA~rmSeQEA~~ 23 (45)
T 3a1q_C 3 LGSEEEQFALALKMSEQEARE 23 (45)
T ss_dssp CSCHHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHhHHHHHH
Confidence 346789999999999877654
No 378
>2d74_B Translation initiation factor 2 beta subunit; protein complex; 2.80A {Pyrococcus furiosus} PDB: 2dcu_B*
Probab=29.60 E-value=19 Score=29.97 Aligned_cols=75 Identities=17% Similarity=0.261 Sum_probs=52.3
Q ss_pred CCccccccccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCC
Q 021440 115 PPFHVMFNGSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMD 194 (312)
Q Consensus 115 PP~~l~~~gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~ 194 (312)
||-.+...|. |-+++|+.+ -|..|||+- +-|.+|+- .
T Consensus 33 P~~~v~~eGk------------KTvi~Nf~d----Ia~~L~R~p---~hv~ky~~------------------------~ 69 (148)
T 2d74_B 33 PGALVTIEGN------------KTIIENFKD----IADALNRDP---QHLLKFLL------------------------R 69 (148)
T ss_dssp CCCCEEEETT------------EEEESCHHH----HHHHHTCCS---HHHHHHHH------------------------H
T ss_pred CCCeEEEecC------------eEEEEcHHH----HHHHHCCCH---HHHHHHHH------------------------H
Confidence 5555666663 899999987 599999963 55555543 1
Q ss_pred CCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhCCCC
Q 021440 195 SIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRSPRK 236 (312)
Q Consensus 195 ~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~~~~~ 236 (312)
.+=+-.-|| +|..+ +.|..++..+-+.|..|+++|=+.
T Consensus 70 ELGt~g~id--~~rli--i~G~~~~~~i~~~L~~yI~~yVlC 107 (148)
T 2d74_B 70 EIATAGTLE--GRRVV--LQGRFTPYLIANKLKKYIKEYVIC 107 (148)
T ss_dssp HSCCCEEEE--TTEEE--ESSCCCHHHHHHHHHHHHHHHSSC
T ss_pred HhCCceeec--CCEEE--EEeeeCHHHHHHHHHHHHHHEEEC
Confidence 122233456 45544 689999999999999999998553
No 379
>1q02_A Sequestosome 1; helical bundle, protein binding; NMR {Homo sapiens} SCOP: a.5.2.1 PDB: 2jy7_A 2jy8_A 2k0b_X 2knv_A 2rru_A 3b0f_A
Probab=29.15 E-value=37 Score=23.36 Aligned_cols=36 Identities=19% Similarity=0.259 Sum_probs=28.1
Q ss_pred hHHHHHhhhccccCCCHHHH--HHHHHHcCCCHHHHHHHH
Q 021440 8 KESRISSFLEIAVGASGVTA--IECLQATSWKLDEAILLF 45 (312)
Q Consensus 8 ~~~~i~~F~~iTt~~~~~~A--~~~Le~~~wdLe~Av~lf 45 (312)
-.+.|.|.+++ |-+.+-+ .++|+..++|+..|++.-
T Consensus 10 l~~al~qMl~M--GF~negGWLt~LL~~k~gDI~~aLD~l 47 (52)
T 1q02_A 10 LIESLSQMLSM--GFSDEGGWLTRLLQTKNYDIGAALDTI 47 (52)
T ss_dssp HHHHHHHHHTT--TCCCTTSHHHHHHHHTTTCHHHHHHHH
T ss_pred HHHHHHHHHHc--CCCccccHHHHHHHHccCCHHHHHHHh
Confidence 35678888888 5555444 699999999999999865
No 380
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=28.97 E-value=96 Score=22.71 Aligned_cols=99 Identities=9% Similarity=0.035 Sum_probs=58.1
Q ss_pred cccccccHHHHHHHHHHcC-CeEEEEeecCCCc----ccchhh----cc-cCCCHHHHHHhhccEEEEEeccCChhHHHH
Q 021440 118 HVMFNGSFEKAKDAALAQD-KWLLVNLQSTKEF----SSLMLN----RD-TWGNEAVSQIISVNFIFWQEYDDTSEGWKV 187 (312)
Q Consensus 118 ~l~~~gsf~~A~~~Ak~~~-KwLLVniq~~~~f----~c~~ln----RD-vw~~~~V~~~i~~nFIfwq~~~ds~EG~~~ 187 (312)
-+-...+..+|+..-.+.+ .++.|- .+ ..+ .-..+- .. -+.+..|.+++..+++....+..-.+..+.
T Consensus 13 ~v~~~~~~~~a~~~~~~~~~~~~~Vv-d~-~~~~G~it~~dl~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~ 90 (125)
T 1pbj_A 13 TIDITASLEDVLRNYVENAKGSSVVV-KE-GVRVGIVTTWDVLEAIAEGDDLAEVKVWEVMERDLVTISPRATIKEAAEK 90 (125)
T ss_dssp EEETTCBHHHHHHHHHHHCCCEEEEE-ET-TEEEEEEEHHHHHHHHHHTCCTTTSBHHHHCBCGGGEECTTSCHHHHHHH
T ss_pred EECCCCcHHHHHHHHHHcCCCEEEEE-eC-CeeEEEEeHHHHHHHHhcCCcccccCHHHHcCCCCeEECCCCCHHHHHHH
Confidence 3344667999887776544 444332 12 221 111111 11 124667888888887777665555666666
Q ss_pred HHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHH
Q 021440 188 CSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLL 227 (312)
Q Consensus 188 ~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~ 227 (312)
...++ +.++.|+|. |+. .|.++..+++..+.
T Consensus 91 ~~~~~---~~~l~Vvd~--~~~----~Gvit~~dl~~~l~ 121 (125)
T 1pbj_A 91 MVKNV---VWRLLVEED--DEI----IGVISATDILRAKM 121 (125)
T ss_dssp HHHHT---CSEEEEEET--TEE----EEEEEHHHHHHHHC
T ss_pred HHhcC---CcEEEEEEC--CEE----EEEEEHHHHHHHHH
Confidence 66554 567778885 653 46677888776653
No 381
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=28.89 E-value=86 Score=26.33 Aligned_cols=102 Identities=10% Similarity=0.074 Sum_probs=63.4
Q ss_pred cccHHHHHHHHHHcC--CeEEEEeec-CCCcccchhhcccC---CCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCC
Q 021440 122 NGSFEKAKDAALAQD--KWLLVNLQS-TKEFSSLMLNRDTW---GNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDS 195 (312)
Q Consensus 122 ~gsf~~A~~~Ak~~~--KwLLVniq~-~~~f~c~~lnRDvw---~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~ 195 (312)
..+..+|+..-++.. +.-.+++.+ ...+---.--||++ .+..|.++++.++++...+.+-.+..+....|+
T Consensus 70 ~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~--- 146 (205)
T 3kxr_A 70 KATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIFKHEPHEPLISLLSEDSRALTANTTLLDAAEAIEHSR--- 146 (205)
T ss_dssp TCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHTTSCTTSBGGGGCCSSCCCEETTSCHHHHHHHHHTSS---
T ss_pred CCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHHhCCCcchHHHHhcCCCeEECCCCCHHHHHHHHHhcC---
Confidence 567888888877730 222222233 22222112233433 244578888888888877776677777777775
Q ss_pred CCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021440 196 IPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (312)
Q Consensus 196 ~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~ 231 (312)
+.++.|||. .|+.+ |.++.+++++.+.+-..
T Consensus 147 ~~~lpVVD~-~g~lv----GiIT~~Dil~~i~~e~~ 177 (205)
T 3kxr_A 147 EIELPVIDD-AGELI----GRVTLRAATALVREHYE 177 (205)
T ss_dssp CSEEEEECT-TSBEE----EEEEHHHHHHHHHHHHC
T ss_pred CCEEEEEcC-CCeEE----EEEEHHHHHHHHHHHHH
Confidence 566778884 46644 66889999888876543
No 382
>3ihp_A Ubiquitin carboxyl-terminal hydrolase 5; hydrolase, protease, thiol protease, UBL conjugation pathway, metal-binding, zinc-finger,structural genomics; 2.80A {Homo sapiens}
Probab=28.15 E-value=60 Score=34.10 Aligned_cols=40 Identities=25% Similarity=0.355 Sum_probs=35.5
Q ss_pred hHHHHHhhhccccCCCHHHHHHHHHHcCCCHHHHHHHHHhcC
Q 021440 8 KESRISSFLEIAVGASGVTAIECLQATSWKLDEAILLFFAVN 49 (312)
Q Consensus 8 ~~~~i~~F~~iTt~~~~~~A~~~Le~~~wdLe~Av~lff~~~ 49 (312)
..+.|.+..++ |-+.+.|++-|+.+++|++.||...|++.
T Consensus 720 ~~e~i~~l~~m--Gf~~~~a~~aL~~t~~~~eraidwlfs~~ 759 (854)
T 3ihp_A 720 PEDCVTTIVSM--GFSRDQALKALRATNNSLERAVDWIFSHI 759 (854)
T ss_dssp CHHHHHHHHTT--TCCHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHc--CCCHHHHHHHHHhhcCcHHHHHHhhhcCc
Confidence 45678888777 89999999999999999999999999864
No 383
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=27.62 E-value=42 Score=25.44 Aligned_cols=105 Identities=16% Similarity=0.073 Sum_probs=62.1
Q ss_pred CCccccccccHHHHHHHHHHcC-CeEEEEeecCCCc----ccchh-----hcccCCCHHHHHHhhccEEEEEeccCChhH
Q 021440 115 PPFHVMFNGSFEKAKDAALAQD-KWLLVNLQSTKEF----SSLML-----NRDTWGNEAVSQIISVNFIFWQEYDDTSEG 184 (312)
Q Consensus 115 PP~~l~~~gsf~~A~~~Ak~~~-KwLLVniq~~~~f----~c~~l-----nRDvw~~~~V~~~i~~nFIfwq~~~ds~EG 184 (312)
++.-+--..+..+|+..-.+.+ .++.|. .+...+ .-..+ .+..+.+..|.+++..+++....+..-.+.
T Consensus 16 ~~~~v~~~~~~~~a~~~~~~~~~~~~~Vv-d~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~ 94 (138)
T 2yzi_A 16 KLLGVKPSTSVQEASRLMMEFDVGSLVVI-NDDGNVVGFFTKSDIIRRVIVPGLPYDIPVERIMTRNLITANVNTPLGEV 94 (138)
T ss_dssp CCCEECTTSBHHHHHHHHHHHTCSEEEEE-CTTSCEEEEEEHHHHHHHTTTTCCCTTSBGGGTCBCSCCEEETTSBHHHH
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEE-cCCCcEEEEEeHHHHHHHHHhcCCcccCCHHHHhhCCCeEECCCCcHHHH
Confidence 3333344667888887766544 444443 222222 11122 222345667888888888777665555666
Q ss_pred HHHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHH
Q 021440 185 WKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPF 229 (312)
Q Consensus 185 ~~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~f 229 (312)
.++...+ .++++ |+|. .|+ ..|.++..+++..+...
T Consensus 95 ~~~m~~~---~~~~l-Vvd~-~g~----~~Giit~~dil~~~~~~ 130 (138)
T 2yzi_A 95 LRKMAEH---RIKHI-LIEE-EGK----IVGIFTLSDLLEASRRR 130 (138)
T ss_dssp HHHHHHH---TCSEE-EEEE-TTE----EEEEEEHHHHHHHHHCC
T ss_pred HHHHHhc---CCCEE-EECC-CCC----EEEEEEHHHHHHHHHHH
Confidence 6666555 46788 9985 465 34677888888776543
No 384
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=27.05 E-value=91 Score=24.16 Aligned_cols=101 Identities=17% Similarity=0.188 Sum_probs=61.7
Q ss_pred ccccccccHHHHHHHHHHcC-CeEEEEeecCCCc----ccchhhccc------CCCHHHHHHhhccEEEEEeccCChhHH
Q 021440 117 FHVMFNGSFEKAKDAALAQD-KWLLVNLQSTKEF----SSLMLNRDT------WGNEAVSQIISVNFIFWQEYDDTSEGW 185 (312)
Q Consensus 117 ~~l~~~gsf~~A~~~Ak~~~-KwLLVniq~~~~f----~c~~lnRDv------w~~~~V~~~i~~nFIfwq~~~ds~EG~ 185 (312)
.-+-...+..+|+..-++.+ ..+.| .. ...+ .-.-+-|-+ +.+..|.+++..+++....+..-.+..
T Consensus 24 ~~v~~~~~~~~a~~~~~~~~~~~~~V-~~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~ 101 (157)
T 4fry_A 24 YTVTKNDFVYDAIKLMAEKGIGALLV-VD-GDDIAGIVTERDYARKVVLQERSSKATRVEEIMTAKVRYVEPSQSTDECM 101 (157)
T ss_dssp CEEETTSBHHHHHHHHHHHTCSEEEE-ES-SSSEEEEEEHHHHHHHSGGGTCCSSSCBHHHHSBSSCCCBCTTSBHHHHH
T ss_pred eEECCCCcHHHHHHHHHHcCCCEEEE-ee-CCEEEEEEEHHHHHHHHHhccCCccccCHHHHcCCCCcEECCCCcHHHHH
Confidence 33444678999988765544 66666 33 2222 111121111 346778999888877766555556666
Q ss_pred HHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHH
Q 021440 186 KVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLP 228 (312)
Q Consensus 186 ~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~ 228 (312)
++...++ +.++.|+| .|+. .|.++..+++..+..
T Consensus 102 ~~m~~~~---~~~lpVvd--~g~~----~Giit~~dil~~l~~ 135 (157)
T 4fry_A 102 ALMTEHR---MRHLPVLD--GGKL----IGLISIGDLVKSVIA 135 (157)
T ss_dssp HHHHHHT---CSEEEEEE--TTEE----EEEEEHHHHHHHHHT
T ss_pred HHHHHcC---CCEEEEEE--CCEE----EEEEEHHHHHHHHHH
Confidence 6666655 55777888 4764 466788888777654
No 385
>2j9u_A VPS28, vacuolar protein sorting-associated protein 28; zinc-finger, metal-binding, protein transport; 2.00A {Saccharomyces cerevisiae} SCOP: a.24.28.1 PDB: 2j9v_A 2g3k_A
Probab=26.53 E-value=33 Score=26.53 Aligned_cols=24 Identities=25% Similarity=0.257 Sum_probs=21.1
Q ss_pred cCCCHHHHHHHHHHcCCCHHHHHHHHHh
Q 021440 20 VGASGVTAIECLQATSWKLDEAILLFFA 47 (312)
Q Consensus 20 t~~~~~~A~~~Le~~~wdLe~Av~lff~ 47 (312)
-.-++++|||+| +|||.|-+.|+.
T Consensus 70 deL~e~q~Rqll----fDle~aY~~F~~ 93 (96)
T 2j9u_A 70 DTLTETQIRELL----FDLELAYKSFYA 93 (96)
T ss_dssp CBCCHHHHHHHH----HHHHHHHHHHHH
T ss_pred ccCCHHHHHHHH----HHHHHHHHHHHH
Confidence 456899999999 799999999985
No 386
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=26.52 E-value=33 Score=25.91 Aligned_cols=108 Identities=14% Similarity=0.111 Sum_probs=60.2
Q ss_pred hhcCCCcccc-ccccHHHHHHHHHHcC-CeEEEEeecCCCc----ccchhhcccCCC----HHHHHHhhccEEEEEeccC
Q 021440 111 SLYRPPFHVM-FNGSFEKAKDAALAQD-KWLLVNLQSTKEF----SSLMLNRDTWGN----EAVSQIISVNFIFWQEYDD 180 (312)
Q Consensus 111 ~lfrPP~~l~-~~gsf~~A~~~Ak~~~-KwLLVniq~~~~f----~c~~lnRDvw~~----~~V~~~i~~nFIfwq~~~d 180 (312)
+...+++..+ ...+..+|+..-++.+ .++.|- .+ +.+ .-.-+-|-+... ..|.+++..+++....+..
T Consensus 9 ~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vv-d~-~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~ 86 (128)
T 3gby_A 9 YLAETDYPVFTLGGSTADAARRLAASGCACAPVL-DG-ERYLGMVHLSRLLEGRKGWPTVKEKLGEELLETVRSYRPGEQ 86 (128)
T ss_dssp GGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEE-ET-TEEEEEEEHHHHHTTCSSSCCTTCBCCGGGCBCCCCBCTTSB
T ss_pred HhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEE-EC-CEEEEEEEHHHHHHHHhhCCcccCcHHHHccCCCcEECCCCC
Confidence 3443443333 3567999988777655 444442 22 222 111222211111 2366777777766655444
Q ss_pred ChhHHHHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHH
Q 021440 181 TSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLP 228 (312)
Q Consensus 181 s~EG~~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~ 228 (312)
-.+..+....+ .++++.|+|. .|+. .|.++..++++.|.+
T Consensus 87 l~~~~~~~~~~---~~~~lpVvd~-~g~~----~Giit~~dll~~l~~ 126 (128)
T 3gby_A 87 LFDNLISVAAA---KCSVVPLADE-DGRY----EGVVSRKRILGFLAE 126 (128)
T ss_dssp GGGSHHHHHHC---SSSEEEEECT-TCBE----EEEEEHHHHHHHHHT
T ss_pred HHHHHHHHHhC---CCcEEEEECC-CCCE----EEEEEHHHHHHHHHh
Confidence 45665555544 4688999984 4663 466788888887754
No 387
>2j9w_A VPS28, VPS28-PROV protein; NZF finger, HIV budding, protein transport; 1.30A {Xenopus laevis}
Probab=26.49 E-value=33 Score=26.84 Aligned_cols=24 Identities=17% Similarity=0.127 Sum_probs=21.1
Q ss_pred cCCCHHHHHHHHHHcCCCHHHHHHHHHh
Q 021440 20 VGASGVTAIECLQATSWKLDEAILLFFA 47 (312)
Q Consensus 20 t~~~~~~A~~~Le~~~wdLe~Av~lff~ 47 (312)
---++++|||+| +|||.|-+.|+.
T Consensus 75 deL~e~q~Rqll----fDle~aY~~F~~ 98 (102)
T 2j9w_A 75 DELDDSQVRQML----FDLESAYNAFNR 98 (102)
T ss_dssp CBCCHHHHHHHH----HHHHHHHHHHHH
T ss_pred ccCCHHHHHHHH----HHHHHHHHHHHH
Confidence 456899999999 799999999985
No 388
>2hc5_A ORF 99, hypothetical protein YVYC; NESG, GFT-PSI, protein structure initiative, northeast structural genomics consortium, alpha-beta, FLAG; NMR {Bacillus subtilis} SCOP: d.352.1.1
Probab=26.40 E-value=81 Score=25.00 Aligned_cols=30 Identities=20% Similarity=0.127 Sum_probs=22.9
Q ss_pred CCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHH
Q 021440 196 IPAVLVIDPITGQKICSWCGMINPQPLGEMLLPF 229 (312)
Q Consensus 196 ~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~f 229 (312)
-..|-|||..||+.+..+ .|+++++.+...
T Consensus 68 ~~vVkVvD~~TgEVIRqI----PpEe~L~l~~~l 97 (117)
T 2hc5_A 68 EYYVKVIEDSTNEVIREI----PPKRWLDFYAAM 97 (117)
T ss_dssp EEEEEEEETTTTEEEEEE----CHHHHHHHHHHH
T ss_pred cEEEEEEECCCCcEEEeC----ChHHHHHHHHHH
Confidence 468889999999999884 577777654443
No 389
>1p9c_A 26S proteasome non-ATPase regulatory subunit 4; alpha helix, hairpin loop, ligand binding protein; NMR {Homo sapiens} SCOP: j.105.1.1 PDB: 1p9d_S 1uel_B
Probab=25.44 E-value=30 Score=23.03 Aligned_cols=17 Identities=12% Similarity=0.134 Sum_probs=14.2
Q ss_pred ChHHHHHHHHHHhhHhh
Q 021440 254 RNIKDCCSALAASMETI 270 (312)
Q Consensus 254 ~~~eql~~Ai~~Sl~~~ 270 (312)
++++||+.|++.||...
T Consensus 20 teeeqla~ALqMSmq~~ 36 (45)
T 1p9c_A 20 TEEEQIAYAMQMSLQGA 36 (45)
T ss_dssp HHHHHHHHHHHHHTSSS
T ss_pred CchHHHHHHHHhccccc
Confidence 34589999999999955
No 390
>2rr9_C Putative uncharacterized protein UIMC1; Lys63-linked diubiquitin, ubiquitin-interacting motif, ubiqu RAP80, DNA repair, nuclear protein; NMR {Homo sapiens}
Probab=25.43 E-value=39 Score=22.21 Aligned_cols=20 Identities=15% Similarity=0.159 Sum_probs=15.0
Q ss_pred ChHHHHHHHHHHhhHhhcCC
Q 021440 254 RNIKDCCSALAASMETIKDT 273 (312)
Q Consensus 254 ~~~eql~~Ai~~Sl~~~~~~ 273 (312)
+++||+.+|++.|-++++..
T Consensus 2 tEEEq~ALA~kmSeQEA~~v 21 (46)
T 2rr9_C 2 TEEEQFALALKMSEQEAREV 21 (46)
T ss_dssp CSHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHhHHHHHHh
Confidence 45688888888888776643
No 391
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=24.80 E-value=1.7e+02 Score=23.18 Aligned_cols=58 Identities=12% Similarity=0.089 Sum_probs=35.6
Q ss_pred EEEEeecCCCcccchhhcccCCCHHHHHHhhcc-EEEEEeccC-ChhHH-HHHHhc--------CCCCCCeEEE
Q 021440 139 LLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVN-FIFWQEYDD-TSEGW-KVCSFY--------NMDSIPAVLV 201 (312)
Q Consensus 139 LLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~n-FIfwq~~~d-s~EG~-~~~~~Y--------~~~~~P~i~I 201 (312)
|.||. .+.|..|....| ...++.||+.+ .-|=.++++ +++.+ .+...+ .....|.|.|
T Consensus 2 V~vYt-t~~c~~c~~kk~----c~~aK~lL~~kgV~feEidI~~d~~~r~eM~~~~~~~~~~~~G~~tvPQIFi 70 (121)
T 1u6t_A 2 IRVYI-ASSSGSTAIKKK----QQDVLGFLEANKIGFEEKDIAANEENRKWMRENVPENSRPATGYPLPPQIFN 70 (121)
T ss_dssp EEEEE-CTTCSCHHHHHH----HHHHHHHHHHTTCCEEEEECTTCHHHHHHHHHHSCGGGSCSSSSCCSCEEEE
T ss_pred EEEEe-cCCCCCccchHH----HHHHHHHHHHCCCceEEEECCCCHHHHHHHHHhccccccccCCCcCCCEEEE
Confidence 45666 447999975543 24688999765 445556665 34444 455566 4557786663
No 392
>2k7r_A Primosomal protein DNAI; DNAI N-terminal domain, helicase-loading protein, ATP- binding, DNA replication, nucleotide-binding, primosome; NMR {Bacillus subtilis}
Probab=24.33 E-value=26 Score=27.08 Aligned_cols=19 Identities=11% Similarity=0.251 Sum_probs=16.4
Q ss_pred hhhcccCCCHHHHHHhhcc
Q 021440 153 MLNRDTWGNEAVSQIISVN 171 (312)
Q Consensus 153 ~lnRDvw~~~~V~~~i~~n 171 (312)
.+-+.|++||+|++||++|
T Consensus 23 ~~~~~vl~dP~V~~Fl~~h 41 (106)
T 2k7r_A 23 QMKEKVMKDQDVQAFLKEN 41 (106)
T ss_dssp HHHHHHTTCHHHHHHHHHS
T ss_pred HHHHHHHcCHHHHHHHHHC
Confidence 3677899999999999976
No 393
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=23.38 E-value=76 Score=23.73 Aligned_cols=104 Identities=10% Similarity=0.177 Sum_probs=57.4
Q ss_pred ccccccHHHHHHHHHHcC-CeEEEEeecCCCc----ccc----hhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHH
Q 021440 119 VMFNGSFEKAKDAALAQD-KWLLVNLQSTKEF----SSL----MLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCS 189 (312)
Q Consensus 119 l~~~gsf~~A~~~Ak~~~-KwLLVniq~~~~f----~c~----~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~ 189 (312)
+-...+..+|+..-.+.+ .++.|. .+ ..+ .-. .+....+.+..|.+++..+++....+..-.+..+...
T Consensus 17 v~~~~~~~~a~~~~~~~~~~~~~Vv-d~-~~~~Givt~~dl~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~l~~~~~~~~ 94 (133)
T 2ef7_A 17 VTKDAKLNDIAKVMTEKNIGSVIVV-DG-NKPVGIITERDIVKAIGKGKSLETKAEEFMTASLITIREDSPITGALALMR 94 (133)
T ss_dssp EETTCBHHHHHHHHHHHTCSEEEEE-ET-TEEEEEEEHHHHHHHHHTTCCTTCBGGGTSEECCCCEETTSBHHHHHHHHH
T ss_pred ECCCCcHHHHHHHHHhcCCCEEEEE-EC-CEEEEEEcHHHHHHHHhcCCCcccCHHHHcCCCCEEECCCCCHHHHHHHHH
Confidence 334667889888766544 444442 12 211 111 1111222344566666666665554444456655555
Q ss_pred hcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021440 190 FYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (312)
Q Consensus 190 ~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~ 232 (312)
.. .++++.|+|. .|+ ..|.++..+++..+.+.+++
T Consensus 95 ~~---~~~~l~Vvd~-~g~----~~Giit~~dll~~~~~~~~~ 129 (133)
T 2ef7_A 95 QF---NIRHLPVVDD-KGN----LKGIISIRDITRAIDDMFET 129 (133)
T ss_dssp HH---TCSEEEEECT-TSC----EEEEEEHHHHHHHHHHHC--
T ss_pred Hc---CCCEEEEECC-CCe----EEEEEEHHHHHHHHHHHHHH
Confidence 44 4677888884 465 44778888988888776543
No 394
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=22.30 E-value=29 Score=31.70 Aligned_cols=41 Identities=7% Similarity=-0.069 Sum_probs=28.7
Q ss_pred HcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEe
Q 021440 134 AQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQE 177 (312)
Q Consensus 134 ~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~ 177 (312)
..+|..++.|.|++|+.|++|.+++- +.+.+ ++=++|+|.+
T Consensus 145 ~~gk~~I~vFtDp~CPYCkkl~~~l~--~~l~~-~~Vr~i~~Pi 185 (273)
T 3tdg_A 145 ANKDKILYIVSDPMCPHCQKELTKLR--DHLKE-NTVRMVVVGW 185 (273)
T ss_dssp GGTTCEEEEEECTTCHHHHHHHHTHH--HHHHH-CEEEEEECCC
T ss_pred CCCCeEEEEEECcCChhHHHHHHHHH--HHhhC-CcEEEEEeec
Confidence 56788999999999999999976652 13333 4444555544
No 395
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=22.28 E-value=2e+02 Score=23.53 Aligned_cols=43 Identities=12% Similarity=0.150 Sum_probs=25.3
Q ss_pred HHHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCCh------HHHHHHHHHHHh
Q 021440 185 WKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINP------QPLGEMLLPFMD 231 (312)
Q Consensus 185 ~~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~------~~fl~~L~~fl~ 231 (312)
.+.+..+.+...|+++| .|+.+..-.|.-+. +.+++.+...+.
T Consensus 135 ~~~a~~~gv~GtPt~~v----ng~~~v~~~~~~~~~~~~~~~~~~~~i~~Li~ 183 (189)
T 3l9v_A 135 ERLFKEYGVRGTPSVYV----RGRYHINNAAFGAFSVENFRSRYAAVVRKLLA 183 (189)
T ss_dssp HHHHHHTTCCSSSEEEE----TTTEEECGGGCCCSSHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHhCCCccCEEEE----CCEEEECccccccccccchHHHHHHHHHHHHh
Confidence 35667889999999996 36644332222233 556655554443
No 396
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=22.21 E-value=1.6e+02 Score=25.37 Aligned_cols=42 Identities=10% Similarity=0.129 Sum_probs=32.5
Q ss_pred HHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhC
Q 021440 186 KVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRS 233 (312)
Q Consensus 186 ~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~~ 233 (312)
+.+..+.+...|+++| + |+. .+.|..+++.|.+.|.+.+.+.
T Consensus 174 ~~a~~~Gv~GvPtfvv-~---g~~--~v~Ga~~~e~~~~~i~~~~~~~ 215 (239)
T 3gl5_A 174 REAAQLGATGVPFFVL-D---RAY--GVSGAQPAEVFTQALTQAWGER 215 (239)
T ss_dssp HHHHHTTCCSSSEEEE-T---TTE--EEESSCCHHHHHHHHHHHHHTC
T ss_pred HHHHHCCCCeeCeEEE-C---CcE--eecCCCCHHHHHHHHHHHHhhc
Confidence 3456788999999986 3 542 2478899999999999988764
No 397
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=22.21 E-value=30 Score=27.11 Aligned_cols=106 Identities=11% Similarity=0.081 Sum_probs=55.9
Q ss_pred ccccccHHHHHHHHHHcC-CeEEEEeecCCCcccchhhccc-------------CCCHHHHHHhhccEEEEEeccCChhH
Q 021440 119 VMFNGSFEKAKDAALAQD-KWLLVNLQSTKEFSSLMLNRDT-------------WGNEAVSQIISVNFIFWQEYDDTSEG 184 (312)
Q Consensus 119 l~~~gsf~~A~~~Ak~~~-KwLLVniq~~~~f~c~~lnRDv-------------w~~~~V~~~i~~nFIfwq~~~ds~EG 184 (312)
+-...+..+|+..-.+.+ ..+.| +.....+---.--+|+ |.+..|.+++..+++....+..-.+.
T Consensus 30 v~~~~~l~~a~~~m~~~~~~~~~V-vd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a 108 (156)
T 3ctu_A 30 LIDTHNADHATLLLSQMTYTRVPV-VTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVHMTKTDVAVVSPDFTITEV 108 (156)
T ss_dssp EETTSBHHHHHHHHTTCSSSEEEE-ECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGGGCBCSCCCBCSSCCHHHH
T ss_pred ECCCCCHHHHHHHHHHCCCceEeE-ECCCCEEEEEEcHHHHHHHHHhccccccccccCcHHHhccCCceeeCCCCcHHHH
Confidence 334567888887776655 33333 2222221100011111 22445666666666655444433455
Q ss_pred HHHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhhCCC
Q 021440 185 WKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDRSPR 235 (312)
Q Consensus 185 ~~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~~~~ 235 (312)
.++...+ .++.|+|. .|+.+ |.++..+++..+.+.+.+...
T Consensus 109 ~~~~~~~-----~~lpVvd~-~g~~~----Giit~~dil~~l~~~~~~~~~ 149 (156)
T 3ctu_A 109 LHKLVDE-----SFLPVVDA-EGIFQ----GIITRKSILKAVNALLHDFSK 149 (156)
T ss_dssp HHHTTTS-----SEEEEECT-TSBEE----EEEETTHHHHHHHHHSCC---
T ss_pred HHHHHHc-----CeEEEEcC-CCeEE----EEEEHHHHHHHHHHHHHhhch
Confidence 4444333 36888884 46644 667888999998887765543
No 398
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=22.01 E-value=84 Score=25.41 Aligned_cols=58 Identities=14% Similarity=-0.028 Sum_probs=35.8
Q ss_pred HHHHHHhhcc-----EEEEEeccCChhHHHHHHhcCCCC-----------CCeEEEEeCCCCeeEEEecCC-------CC
Q 021440 162 EAVSQIISVN-----FIFWQEYDDTSEGWKVCSFYNMDS-----------IPAVLVIDPITGQKICSWCGM-------IN 218 (312)
Q Consensus 162 ~~V~~~i~~n-----FIfwq~~~ds~EG~~~~~~Y~~~~-----------~P~i~IIdprTGe~v~~~~G~-------~~ 218 (312)
+.+++|++++ |-++ .| ...+++..|.+.. .|+..|| + .|+.+..+.+. ..
T Consensus 79 ~~~~~~~~~~~~~~~fp~l---~D--~~~~~~~~~gv~~~~~~~~g~~~~~p~t~lI-~-~G~I~~~~~~~~~~~~~~~~ 151 (167)
T 2wfc_A 79 FVMDAWGKAHGADDKVQML---AD--PGGAFTKAVDMELDLSAVLGNVRSKRYSLVI-E-DGVVTKVNVEPDGKGLTCSL 151 (167)
T ss_dssp HHHHHHHHHTTCTTTSEEE---EC--TTSHHHHHTTCEECCHHHHSSCEECCEEEEE-E-TTEEEEEEECTTSSSSSTTS
T ss_pred HHHHHHHHhcCCCcceEEE---EC--CCCcHHHHcCCccccccccCcccceEEEEEE-e-CCEEEEEEecCCCCcceecc
Confidence 4566777654 4433 23 2346777888743 4999999 6 79988776543 24
Q ss_pred hHHHHHHH
Q 021440 219 PQPLGEML 226 (312)
Q Consensus 219 ~~~fl~~L 226 (312)
++.+++.|
T Consensus 152 ~~~~~~~~ 159 (167)
T 2wfc_A 152 APNILSQL 159 (167)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 56555554
No 399
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=21.60 E-value=91 Score=23.26 Aligned_cols=102 Identities=11% Similarity=0.060 Sum_probs=60.4
Q ss_pred CCccccccccHHHHHHHHHHcC-CeEEEEeecCCCc----ccchhh-----cccC-CCHHHHHHhhccEEEEEeccCChh
Q 021440 115 PPFHVMFNGSFEKAKDAALAQD-KWLLVNLQSTKEF----SSLMLN-----RDTW-GNEAVSQIISVNFIFWQEYDDTSE 183 (312)
Q Consensus 115 PP~~l~~~gsf~~A~~~Ak~~~-KwLLVniq~~~~f----~c~~ln-----RDvw-~~~~V~~~i~~nFIfwq~~~ds~E 183 (312)
++.-+-...+..+|+..-.+.+ .++.|. .+...+ .-..+- +..+ .+..|.+++..+++....+..-.+
T Consensus 17 ~~~~v~~~~~~~~a~~~~~~~~~~~~~Vv-d~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~ 95 (133)
T 1y5h_A 17 GVTCVGEHETLTAAAQYMREHDIGALPIC-GDDDRLHGMLTDRDIVIKGLAAGLDPNTATAGELARDSIYYVDANASIQE 95 (133)
T ss_dssp TCCCEETTSBHHHHHHHHHHHTCSEEEEE-CGGGBEEEEEEHHHHHHTTGGGTCCTTTSBHHHHHTTCCCCEETTCCHHH
T ss_pred CceEeCCCCCHHHHHHHHHHhCCCeEEEE-CCCCeEEEEEeHHHHHHHHHhcCCCccccCHHHHhcCCCEEECCCCCHHH
Confidence 3333444668999987766544 455443 121211 111121 1222 456799999888887776666667
Q ss_pred HHHHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHH
Q 021440 184 GWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEML 226 (312)
Q Consensus 184 G~~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L 226 (312)
..+....++ +.++.|+|. |+ +.|.++..+++..+
T Consensus 96 ~~~~m~~~~---~~~l~Vvd~--g~----~~Giit~~dil~~l 129 (133)
T 1y5h_A 96 MLNVMEEHQ---VRRVPVISE--HR----LVGIVTEADIARHL 129 (133)
T ss_dssp HHHHHHHHT---CSEEEEEET--TE----EEEEEEHHHHHHTC
T ss_pred HHHHHHHcC---CCEEEEEEC--CE----EEEEEEHHHHHHHH
Confidence 777666654 567788884 65 34667777776543
No 400
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=21.52 E-value=78 Score=27.29 Aligned_cols=72 Identities=8% Similarity=-0.015 Sum_probs=52.8
Q ss_pred ccHHHHHHHHHHcCCeEEEEeecCCCcccchhhcccCCCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEEE
Q 021440 123 GSFEKAKDAALAQDKWLLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVI 202 (312)
Q Consensus 123 gsf~~A~~~Ak~~~KwLLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~II 202 (312)
+++++.....|+.+|.++|++-. +.-|. .++.-.+|+ +.+=...+=-....+.+.++.+++...|.+.+|
T Consensus 43 ~~L~~iv~~ik~~gK~vivh~Dl-----I~GLs----~d~~ai~fL-~~~~pdGIIsTk~~~i~~Akk~GL~tIqR~Fli 112 (188)
T 1vkf_A 43 LNLKFHLKILKDRGKTVFVDMDF-----VNGLG----EGEEAILFV-KKAGADGIITIKPKNYVVAKKNGIPAVLRFFAL 112 (188)
T ss_dssp TTHHHHHHHHHHTTCEEEEEGGG-----EETCC----SSHHHHHHH-HHHTCSEEEESCHHHHHHHHHTTCCEEEEEECC
T ss_pred HHHHHHHHHHHHCCCeEEEecCc-----ccccC----CCHHHHHHH-HhcCCCEEEcCcHHHHHHHHHcCCEEeeEEEEE
Confidence 34899999999999999999754 34443 467888888 332222222245778889999999999999999
Q ss_pred eC
Q 021440 203 DP 204 (312)
Q Consensus 203 dp 204 (312)
|.
T Consensus 113 Ds 114 (188)
T 1vkf_A 113 DS 114 (188)
T ss_dssp SH
T ss_pred Ee
Confidence 94
No 401
>1yx4_A 26S proteasome non-ATPase regulatory subunit 4; polyubiquitin, UIM, hydrolase; NMR {Homo sapiens} PDB: 1yx5_A 1yx6_A 2kde_A 2kdf_A
Probab=21.38 E-value=41 Score=27.47 Aligned_cols=21 Identities=10% Similarity=0.142 Sum_probs=17.2
Q ss_pred CCCChHHHHHHHHHHhhHhhc
Q 021440 251 TPQRNIKDCCSALAASMETIK 271 (312)
Q Consensus 251 ~~~~~~eql~~Ai~~Sl~~~~ 271 (312)
...++++||+.||+.||.+..
T Consensus 105 ~~MtEEeqLa~ALqMSMQe~~ 125 (132)
T 1yx4_A 105 SSMTEEEQIAYAMQMSLQGAE 125 (132)
T ss_dssp TTSCHHHHHHHHHHHSSSSCS
T ss_pred hhCChHHHHHHHHHhcccccc
Confidence 355778999999999999653
No 402
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=21.30 E-value=2.3e+02 Score=20.92 Aligned_cols=97 Identities=12% Similarity=0.101 Sum_probs=54.8
Q ss_pred cccccHHHHHHHHHHcC-CeEEEEeecC-CCc----ccchhhcc---cCCCHHHHHHhhccEEEEEeccCChhHHHHHHh
Q 021440 120 MFNGSFEKAKDAALAQD-KWLLVNLQST-KEF----SSLMLNRD---TWGNEAVSQIISVNFIFWQEYDDTSEGWKVCSF 190 (312)
Q Consensus 120 ~~~gsf~~A~~~Ak~~~-KwLLVniq~~-~~f----~c~~lnRD---vw~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~ 190 (312)
--..+..+|+..-.+.+ ..+.|. .+. ..+ .-.-+-|- -+.+..|.++++. .++...+..-.+..+....
T Consensus 19 ~~~~~~~~a~~~m~~~~~~~~pVv-d~~~~~~vGivt~~dl~~~~~~~~~~~~v~~~m~~-~~~v~~~~~l~~a~~~m~~ 96 (127)
T 3nqr_A 19 KRNQTLDECLDVIIESAHSRFPVI-SEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVLRT-AVVVPESKRVDRMLKEFRS 96 (127)
T ss_dssp ETTCCHHHHHHHHHHHCCSEEEEE-SSSTTCEEEEEEGGGGGGGGSTTCCCCCHHHHCBC-CCEEETTCBHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHhCCCCEEEEE-cCCCCcEEEEEEHHHHHHHHhccCCCCCHHHHcCC-CeEECCCCcHHHHHHHHHh
Confidence 34667889988776654 344443 332 222 11222221 1356678999865 5444433333455555544
Q ss_pred cCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHH
Q 021440 191 YNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEML 226 (312)
Q Consensus 191 Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L 226 (312)
+ .++++.|+|. .|+. .|.++..++++.|
T Consensus 97 ~---~~~~lpVvd~-~g~~----~Giit~~dll~~l 124 (127)
T 3nqr_A 97 Q---RYHMAIVIDE-FGGV----SGLVTIEDILELI 124 (127)
T ss_dssp T---TCCEEEEECT-TSCE----EEEEEHHHHHHHC
T ss_pred c---CCeEEEEEeC-CCCE----EEEEEHHHHHHHH
Confidence 4 4678888985 4664 4667788887765
No 403
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=21.28 E-value=98 Score=24.53 Aligned_cols=64 Identities=9% Similarity=0.128 Sum_probs=41.3
Q ss_pred CCHHHHHHhhccEEEEEeccCChhHHHHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHhh
Q 021440 160 GNEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMDR 232 (312)
Q Consensus 160 ~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~~ 232 (312)
.+..|.+++..+++....+..-.+..+....++ ++++.|+| .|+. .|.++..+++..+......
T Consensus 106 ~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~---~~~l~Vvd--~g~~----vGiit~~dll~~l~~~~~~ 169 (185)
T 2j9l_A 106 PTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLG---LRQCLVTH--NGRL----LGIITKKDVLKHIAQMANQ 169 (185)
T ss_dssp CCEECGGGEESSCCEEETTSBHHHHHHHHHHHT---CSEEEEEE--TTEE----EEEEEHHHHHHHHHHHCC-
T ss_pred cCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCC---CcEEEEEE--CCEE----EEEEEHHHHHHHHHHhhcc
Confidence 444566667667666655444456666555554 66778888 4764 4778888988888765543
No 404
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=20.85 E-value=2.4e+02 Score=24.81 Aligned_cols=102 Identities=16% Similarity=0.142 Sum_probs=65.3
Q ss_pred ccccHHHHHHHHHHcC------CeEEEEeecCCCcccchhhcccC---CCHHHHHHhhccEEEEEeccCChhHHHHHHhc
Q 021440 121 FNGSFEKAKDAALAQD------KWLLVNLQSTKEFSSLMLNRDTW---GNEAVSQIISVNFIFWQEYDDTSEGWKVCSFY 191 (312)
Q Consensus 121 ~~gsf~~A~~~Ak~~~------KwLLVniq~~~~f~c~~lnRDvw---~~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y 191 (312)
-..+..+|+..-++.+ ..+.|. .+.+.+--..--+|+. .+..|.+++..++++...+.+-.+..+....|
T Consensus 152 ~~~tv~ea~~~~~~~~~~~~~~~~~pVv-d~~~~lvGivt~~dll~~~~~~~v~~im~~~~~~v~~~~~l~ea~~~m~~~ 230 (286)
T 2oux_A 152 ANQTVRSAMYVLKNQADMAETIYYVYVV-DQENHLVGVISLRDLIVNDDDTLIADILNERVISVHVGDDQEDVAQTIRDY 230 (286)
T ss_dssp SSSBHHHHHHHHHHHCSSCSCCSEEEEE-CTTCBEEEEEEHHHHTTSCTTSBHHHHSBSCCCCEETTSBHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHcccCccceeEEEEE-cCCCeEEEEEEHHHHHcCCCCCcHHHHcCCCCeeecCCCCHHHHHHHHHHc
Confidence 3568999998887752 223222 1222222112223333 35679999988988888777778888888888
Q ss_pred CCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHHHHh
Q 021440 192 NMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLPFMD 231 (312)
Q Consensus 192 ~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~fl~ 231 (312)
++ .++.|+|. .|+. .|.++..++++.+.+-..
T Consensus 231 ~~---~~lpVVd~-~g~l----vGiIT~~Dil~~i~~e~~ 262 (286)
T 2oux_A 231 DF---LAVPVTDY-DDHL----LGIVTVDDIIDVIDDEAA 262 (286)
T ss_dssp TC---SEEEEECT-TCBE----EEEEEHHHHHHHHHHHHH
T ss_pred CC---cEEEEEcC-CCeE----EEEEEHHHHHHHHHHHhH
Confidence 64 55677884 4664 477888999888776543
No 405
>2bkf_A Zinc-finger protein NBR1 (NEXT to breast cancer 1; PB1 domain, interaction domain, Z finger; 1.56A {Homo sapiens} SCOP: d.15.2.2 PDB: 2g4s_A
Probab=20.69 E-value=67 Score=24.36 Aligned_cols=30 Identities=20% Similarity=0.308 Sum_probs=25.4
Q ss_pred CccccccccHHHHHHHHHHcCCeEEEEeec
Q 021440 116 PFHVMFNGSFEKAKDAALAQDKWLLVNLQS 145 (312)
Q Consensus 116 P~~l~~~gsf~~A~~~Ak~~~KwLLVniq~ 145 (312)
+.-|..++.|++|+..|.+++.-|-++++.
T Consensus 57 ~v~i~Sq~E~eEAlkva~k~~n~L~m~v~~ 86 (87)
T 2bkf_A 57 EVSINSQGEYEEALKMAVKQGNQLQMQVHE 86 (87)
T ss_dssp EEEECSHHHHHHHHHHHHHTTTEEEEEEEE
T ss_pred EEEEecHHHHHHHHHHhccCCCEEEEEEec
Confidence 345677889999999999999999998864
No 406
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=20.67 E-value=1.1e+02 Score=24.37 Aligned_cols=97 Identities=12% Similarity=0.136 Sum_probs=58.2
Q ss_pred cccHHHHHHHHHHcC-CeEEEEeecC-CCcccchhhcccCC------CHHHHHHhhccEEEEEeccCChhHHHHHHhcCC
Q 021440 122 NGSFEKAKDAALAQD-KWLLVNLQST-KEFSSLMLNRDTWG------NEAVSQIISVNFIFWQEYDDTSEGWKVCSFYNM 193 (312)
Q Consensus 122 ~gsf~~A~~~Ak~~~-KwLLVniq~~-~~f~c~~lnRDvw~------~~~V~~~i~~nFIfwq~~~ds~EG~~~~~~Y~~ 193 (312)
..+..+|+..-++.+ ..+.|. .+. ..+---.--+|++. +..|.+++ .++++..-+..-.+..++...++
T Consensus 60 ~~~v~~a~~~m~~~~~~~~pVv-d~~~~~lvGivt~~dl~~~~~~~~~~~v~~im-~~~~~v~~~~~l~~a~~~m~~~~- 136 (172)
T 3lhh_A 60 NLPLDANLRTVMQSPHSRFPVC-RNNVDDMVGIISAKQLLSESIAGERLELVDLV-KNCNFVPNSLSGMELLEHFRTTG- 136 (172)
T ss_dssp TSCHHHHHHHHHTCCCSEEEEE-SSSTTSEEEEEEHHHHHHHHHTTCCCCGGGGC-BCCEEEETTCCHHHHHHHHHHHT-
T ss_pred CCCHHHHHHHHHhCCCCEEEEE-eCCCCeEEEEEEHHHHHHHHhhcCcccHHHHh-cCCeEeCCCCCHHHHHHHHHHcC-
Confidence 567888888777654 344443 222 22211111122221 34567777 77777766666677777776665
Q ss_pred CCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHHH
Q 021440 194 DSIPAVLVIDPITGQKICSWCGMINPQPLGEMLLP 228 (312)
Q Consensus 194 ~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~~ 228 (312)
.+++.|+|. .|+. .|.++..++++.|..
T Consensus 137 --~~~~pVvd~-~g~l----vGiit~~Dil~~l~~ 164 (172)
T 3lhh_A 137 --SQMVFVVDE-YGDL----KGLVTLQDMMDALTG 164 (172)
T ss_dssp --CSEEEEECT-TSCE----EEEEEHHHHHHHHHT
T ss_pred --CeEEEEEeC-CCCE----EEEeeHHHHHHHHhC
Confidence 578888885 4664 466788888887653
No 407
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=20.61 E-value=2.2e+02 Score=21.10 Aligned_cols=104 Identities=8% Similarity=0.008 Sum_probs=55.4
Q ss_pred CCccccccccHHHHHHHHHHcC-CeEEEEeecCCCc----ccchhhc----c--cCCCHHHHHHhhc------cEEEEEe
Q 021440 115 PPFHVMFNGSFEKAKDAALAQD-KWLLVNLQSTKEF----SSLMLNR----D--TWGNEAVSQIISV------NFIFWQE 177 (312)
Q Consensus 115 PP~~l~~~gsf~~A~~~Ak~~~-KwLLVniq~~~~f----~c~~lnR----D--vw~~~~V~~~i~~------nFIfwq~ 177 (312)
++.-+-...+..+|+..-.+.+ ..+.| +.+...+ .-..+-+ . .+.+..|.+++.. .++....
T Consensus 20 ~~~~v~~~~~~~~a~~~~~~~~~~~~~V-vd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~~~~~~~v~~ 98 (144)
T 2nyc_A 20 NMKSCQMTTPVIDVIQMLTQGRVSSVPI-IDENGYLINVYEAYDVLGLIKGGIYNDLSLSVGEALMRRSDDFEGVYTCTK 98 (144)
T ss_dssp SCCCBCTTSBHHHHHHHHHHHTCSEEEE-ECTTCBEEEEEEHHHHHHHHHTC----CCSBHHHHHHHCC------CEECT
T ss_pred CceEECCCCcHHHHHHHHHHcCcceeeE-EcCCCcEEEEEcHHHHHHHhcccccccCCccHHHHHhcCccccCCCeEECC
Confidence 3333444567888887766654 33333 2222222 1111111 1 1335568888765 4555554
Q ss_pred ccCChhHHHHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHHH
Q 021440 178 YDDTSEGWKVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEMLL 227 (312)
Q Consensus 178 ~~ds~EG~~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L~ 227 (312)
+..-.+..+.....+ +.++.|+|. .|+. .|.++..+++..|.
T Consensus 99 ~~~l~~~~~~m~~~~---~~~l~Vvd~-~g~~----~Giit~~dil~~l~ 140 (144)
T 2nyc_A 99 NDKLSTIMDNIRKAR---VHRFFVVDD-VGRL----VGVLTLSDILKYIL 140 (144)
T ss_dssp TSBHHHHHHHHHHHT---CSEEEEECT-TSBE----EEEEEHHHHHHHHH
T ss_pred CCcHHHHHHHHHHCC---CCEEEEECC-CCCE----EEEEEHHHHHHHHH
Confidence 444456666555544 567778884 4664 46678888877664
No 408
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=20.51 E-value=78 Score=26.30 Aligned_cols=37 Identities=8% Similarity=-0.021 Sum_probs=29.3
Q ss_pred HHHHhcCCCCCCeEEEEeCCCCeeEEEecCCCChHHHHHHH
Q 021440 186 KVCSFYNMDSIPAVLVIDPITGQKICSWCGMINPQPLGEML 226 (312)
Q Consensus 186 ~~~~~Y~~~~~P~i~IIdprTGe~v~~~~G~~~~~~fl~~L 226 (312)
++++.+.+...|+++| .|+.+....|..++++|.+.|
T Consensus 145 ~~a~~~GV~gtPtf~i----ng~~~~~~s~~~~~e~w~~~l 181 (182)
T 3gn3_A 145 KYARQNGIHVSPTFMI----NGLVQPGMSSGDPVSKWVSDI 181 (182)
T ss_dssp HHHHHHTCCSSSEEEE----TTEECTTCCTTSCHHHHHHHH
T ss_pred HHHHHCCCCccCEEEE----CCEEccCCCCCCCHHHHHHHh
Confidence 5677889999999986 377665567788999998876
No 409
>1wj6_A KIAA0049 protein, RSGI RUH-024; PB1 domain, protein binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: d.15.2.2
Probab=20.18 E-value=75 Score=24.76 Aligned_cols=31 Identities=19% Similarity=0.287 Sum_probs=26.5
Q ss_pred CccccccccHHHHHHHHHHcCCeEEEEeecC
Q 021440 116 PFHVMFNGSFEKAKDAALAQDKWLLVNLQST 146 (312)
Q Consensus 116 P~~l~~~gsf~~A~~~Ak~~~KwLLVniq~~ 146 (312)
+.-|..++.|++|+..|.+++.-|-++++..
T Consensus 65 ~V~i~Sq~E~eEAlkva~k~~n~L~m~V~~~ 95 (101)
T 1wj6_A 65 EVSINSQGEYEEALKMAVKQGNQLQMQVHEG 95 (101)
T ss_dssp EECCCSHHHHHHHHHHHHHHTSEEEEECCBC
T ss_pred EEEEecHHHHHHHHHHhccCCCEEEEEEeec
Confidence 3456678899999999999999999999873
No 410
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.18 E-value=2.4e+02 Score=21.04 Aligned_cols=62 Identities=10% Similarity=0.018 Sum_probs=33.6
Q ss_pred EEEEeecCCCcccchhhcccCCCHHHHHHhhcc---EEEEEeccCChhHHH-HHHhc--------CCCCCCeEEEEeCCC
Q 021440 139 LLVNLQSTKEFSSLMLNRDTWGNEAVSQIISVN---FIFWQEYDDTSEGWK-VCSFY--------NMDSIPAVLVIDPIT 206 (312)
Q Consensus 139 LLVniq~~~~f~c~~lnRDvw~~~~V~~~i~~n---FIfwq~~~ds~EG~~-~~~~Y--------~~~~~P~i~IIdprT 206 (312)
|.|| ..++|..|+...+ ...++++++++ |...-++. .++..+ +...+ ....+|.|. |+
T Consensus 10 V~vy-~~~~C~~C~~~~~----~~~ak~~L~~~gi~y~~vdI~~-~~~~~~~l~~~~~~~~~~~~g~~tvP~vf-i~--- 79 (111)
T 2ct6_A 10 IRVF-IASSSGFVAIKKK----QQDVVRFLEANKIEFEEVDITM-SEEQRQWMYKNVPPEKKPTQGNPLPPQIF-NG--- 79 (111)
T ss_dssp EEEE-ECSSCSCHHHHHH----HHHHHHHHHHTTCCEEEEETTT-CHHHHHHHHHSCCTTTCCSSSSCCSCEEE-ET---
T ss_pred EEEE-EcCCCCCcccchh----HHHHHHHHHHcCCCEEEEECCC-CHHHHHHHHHHhcccccccCCCCCCCEEE-EC---
Confidence 4444 4568999984321 12456677654 44443333 244444 45554 556799885 44
Q ss_pred CeeE
Q 021440 207 GQKI 210 (312)
Q Consensus 207 Ge~v 210 (312)
|+.+
T Consensus 80 g~~i 83 (111)
T 2ct6_A 80 DRYC 83 (111)
T ss_dssp TEEE
T ss_pred CEEE
Confidence 5544
Done!