Query 021443
Match_columns 312
No_of_seqs 203 out of 987
Neff 5.4
Searched_HMMs 13730
Date Mon Mar 25 04:13:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021443.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/021443hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2pila_ d.24.1.1 (A:) Pilin Gc 15.2 86 0.0063 22.1 4.5 26 73-98 7-32 (158)
2 d2vvpa1 c.121.1.1 (A:3-158) Al 9.6 96 0.007 24.1 3.1 25 89-113 132-156 (156)
3 d2gexa1 d.17.4.9 (A:2-139) Nog 9.2 1.2E+02 0.0089 21.3 3.5 20 259-278 116-135 (138)
4 d1gvea_ c.1.7.1 (A:) Aflatoxin 6.1 55 0.004 27.4 0.0 29 83-111 5-33 (324)
5 d2geya1 d.17.4.9 (A:2-145) Put 5.9 90 0.0065 22.4 1.2 20 259-278 114-133 (144)
6 d2j7ja2 g.37.1.1 (A:29-57) Tra 4.8 76 0.0056 18.0 0.1 10 301-310 13-22 (29)
7 d1oyia_ a.4.5.19 (A:) dsRNA-bi 4.3 1.1E+02 0.0077 19.9 0.5 28 11-38 34-61 (62)
8 d1us0a_ c.1.7.1 (A:) Aldose re 4.2 1.5E+02 0.011 24.0 1.6 14 83-96 16-29 (314)
9 d1frba_ c.1.7.1 (A:) FR-1 (fib 4.2 1.5E+02 0.011 24.1 1.5 23 83-109 15-37 (315)
10 d2ciwa2 a.39.3.1 (A:120-298) C 4.1 90 0.0066 23.8 0.0 10 219-228 88-97 (179)
No 1
>d2pila_ d.24.1.1 (A:) Pilin Gc {Neisseria gonorrhoeae [TaxId: 485]}
Probab=15.23 E-value=86 Score=22.07 Aligned_cols=26 Identities=4% Similarity=-0.105 Sum_probs=16.4
Q ss_pred HHHHHHHHHHhhcchhhhhhHHHHHH
Q 021443 73 WLLFLPGAISFGLGTWQIFRRQDKIK 98 (312)
Q Consensus 73 lll~l~~~v~~~LG~WQl~R~~wK~~ 98 (312)
+++++++++|.+++.-.+.+...|.+
T Consensus 7 lVViaIIgILaaia~P~~~~~~~~a~ 32 (158)
T d2pila_ 7 MIVIAIVGILAAVALPAYQDYTARAQ 32 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555556677777777777666543
No 2
>d2vvpa1 c.121.1.1 (A:3-158) Alternate ribose 5-phosphate isomerase B, RpiB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=9.56 E-value=96 Score=24.07 Aligned_cols=25 Identities=20% Similarity=0.318 Sum_probs=21.8
Q ss_pred hhhhHHHHHHHHHHHHHHhcCCCcc
Q 021443 89 QIFRRQDKIKMLEYRQNRLQMDPLR 113 (312)
Q Consensus 89 Ql~R~~wK~~Lia~ie~r~~a~Pv~ 113 (312)
.=.|.+.+.+.|.++|++.+.||+|
T Consensus 132 ~ggRh~~Rv~ki~~~e~~~~~~~~p 156 (156)
T d2vvpa1 132 KAQRHQRRIDILAEYERTHEAPPVP 156 (156)
T ss_dssp CCHHHHHHHHHHHHHHHHCCCCCCC
T ss_pred CCChHHHHHHHHHHHHHcCCCCCCC
Confidence 4569999999999999999998876
No 3
>d2gexa1 d.17.4.9 (A:2-139) Nogalamycin biosynthesis protein SnoL {Streptomyces nogalater [TaxId: 38314]}
Probab=9.20 E-value=1.2e+02 Score=21.25 Aligned_cols=20 Identities=15% Similarity=0.275 Sum_probs=17.8
Q ss_pred CCeeeeeCHHHHHHhcCCCc
Q 021443 259 GSMWMFLQLLVLVGSLKTLS 278 (312)
Q Consensus 259 ~~~w~~iDl~~ma~~lg~~p 278 (312)
...|.|+|...|.++||..|
T Consensus 116 ~e~~~~~D~~~~~~QlG~~P 135 (138)
T d2gexa1 116 VEHWDVFNFSPLFRDLGVVP 135 (138)
T ss_dssp EEEEEEEECHHHHHHSTTCH
T ss_pred EEEEEEECHHHHHHHcCCCC
Confidence 45899999999999999877
No 4
>d1gvea_ c.1.7.1 (A:) Aflatoxin aldehyde reductase (akr7a1) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=6.09 E-value=55 Score=27.36 Aligned_cols=29 Identities=24% Similarity=0.113 Sum_probs=21.8
Q ss_pred hhcchhhhhhHHHHHHHHHHHHHHhcCCC
Q 021443 83 FGLGTWQIFRRQDKIKMLEYRQNRLQMDP 111 (312)
Q Consensus 83 ~~LG~WQl~R~~wK~~Lia~ie~r~~a~P 111 (312)
++||+||+.+.-.+.+-++-++..+...-
T Consensus 5 ~~LGt~~~G~~~d~~~a~~~l~~a~~~Gi 33 (324)
T d1gvea_ 5 TVLGAMEMGRRMDVTSSSRSVRAFLQRGH 33 (324)
T ss_dssp EEEECTTBTTTBCHHHHHHHHHHHHHTTC
T ss_pred EEECCccCCCCCCHHHHHHHHHHHHHCCC
Confidence 47999999976666677777777776553
No 5
>d2geya1 d.17.4.9 (A:2-145) Putative hydroxylase AclR {Streptomyces galilaeus [TaxId: 33899]}
Probab=5.91 E-value=90 Score=22.42 Aligned_cols=20 Identities=20% Similarity=0.316 Sum_probs=17.3
Q ss_pred CCeeeeeCHHHHHHhcCCCc
Q 021443 259 GSMWMFLQLLVLVGSLKTLS 278 (312)
Q Consensus 259 ~~~w~~iDl~~ma~~lg~~p 278 (312)
...|-|+|...|.+++|..|
T Consensus 114 ~e~~~~~D~~~~~~QLG~~p 133 (144)
T d2geya1 114 VEHWDVINMRPLLVRLGKLP 133 (144)
T ss_dssp EEEEEEEECHHHHHHTTSSC
T ss_pred EEEEEeeCHHHHHHHCCCCC
Confidence 45899999999999999754
No 6
>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}
Probab=4.79 E-value=76 Score=17.96 Aligned_cols=10 Identities=40% Similarity=0.398 Sum_probs=7.6
Q ss_pred eeeeecchhc
Q 021443 301 LCFGVQSCLK 310 (312)
Q Consensus 301 ~~~~~~~~~~ 310 (312)
-||+.-||||
T Consensus 13 k~fs~ps~lk 22 (29)
T d2j7ja2 13 KRFSLPSRLK 22 (29)
T ss_dssp CEESSHHHHH
T ss_pred ccccCHHHHh
Confidence 3788888887
No 7
>d1oyia_ a.4.5.19 (A:) dsRNA-binding protein E3 (E3L) {Vaccinia virus [TaxId: 10245]}
Probab=4.26 E-value=1.1e+02 Score=19.89 Aligned_cols=28 Identities=21% Similarity=0.421 Sum_probs=19.4
Q ss_pred hhhhhhhhccCcccccccccCCcccccc
Q 021443 11 SISKTLTKLGGGSSFLLNHRAPPRLYSS 38 (312)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 38 (312)
...|.|..+--..|.-...-.|||||-+
T Consensus 34 evnkalydlqrsamvy~s~d~pprw~~t 61 (62)
T d1oyia_ 34 EVNKALYDLQRSAMVYSSDDIPPRWFMT 61 (62)
T ss_dssp HHHHHHHHHHHHTSSEECSSSSCEEESC
T ss_pred HHHHHHHHHHHhhheecCCCCCCccccc
Confidence 3456676666566666667789999865
No 8
>d1us0a_ c.1.7.1 (A:) Aldose reductase (aldehyde reductase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.17 E-value=1.5e+02 Score=23.99 Aligned_cols=14 Identities=43% Similarity=0.710 Sum_probs=10.1
Q ss_pred hhcchhhhhhHHHH
Q 021443 83 FGLGTWQIFRRQDK 96 (312)
Q Consensus 83 ~~LG~WQl~R~~wK 96 (312)
++||+||+.+.+-.
T Consensus 16 iglGtw~~~~~~~~ 29 (314)
T d1us0a_ 16 LGLGTWKSPPGQVT 29 (314)
T ss_dssp BCEECTTCCHHHHH
T ss_pred eeeECCCCCHHHHH
Confidence 47899999875433
No 9
>d1frba_ c.1.7.1 (A:) FR-1 (fibroblast growth factor-induced) protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=4.16 E-value=1.5e+02 Score=24.11 Aligned_cols=23 Identities=30% Similarity=0.436 Sum_probs=14.1
Q ss_pred hhcchhhhhhHHHHHHHHHHHHHHhcC
Q 021443 83 FGLGTWQIFRRQDKIKMLEYRQNRLQM 109 (312)
Q Consensus 83 ~~LG~WQl~R~~wK~~Lia~ie~r~~a 109 (312)
++||+|++...+- .+.++.++.+
T Consensus 15 iGlGtw~~~~~~a----~~~i~~Ald~ 37 (315)
T d1frba_ 15 VGLGTWKSPPNQV----KEAVKAAIDA 37 (315)
T ss_dssp BCEECTTCCHHHH----HHHHHHHHHT
T ss_pred cceECCCCCHHHH----HHHHHHHHHc
Confidence 4799999986433 3344444444
No 10
>d2ciwa2 a.39.3.1 (A:120-298) Cloroperoxidase {Fungus (Caldariomyces fumago) [TaxId: 5474]}
Probab=4.14 E-value=90 Score=23.83 Aligned_cols=10 Identities=30% Similarity=1.524 Sum_probs=8.1
Q ss_pred cchhhhhccC
Q 021443 219 SSWWWFWLKK 228 (312)
Q Consensus 219 ~sw~~fw~~~ 228 (312)
..||++|..|
T Consensus 88 idwwkywftn 97 (179)
T d2ciwa2 88 IDWWKYWFTN 97 (179)
T ss_dssp HHHHHHHHHH
T ss_pred eehhhhhhcc
Confidence 4799999853
Done!