Query 021445
Match_columns 312
No_of_seqs 373 out of 2633
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 04:15:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021445.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021445hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ihg_A Cyclophilin 40; ppiase 100.0 1.3E-66 4.4E-71 483.4 35.3 306 3-311 15-320 (370)
2 1a58_A Cyclophilin; isomerase, 100.0 2.6E-53 8.8E-58 351.3 22.6 171 3-173 6-176 (177)
3 2wfi_A Peptidyl-prolyl CIS-tra 100.0 3E-53 1E-57 351.2 22.7 171 3-173 9-179 (179)
4 2igv_A Peptidyl-prolyl CIS-tra 100.0 4.6E-53 1.6E-57 348.6 21.7 172 1-174 1-172 (173)
5 2he9_A NK-tumor recognition pr 100.0 6.3E-53 2.1E-57 352.1 22.7 174 1-174 17-190 (192)
6 2z6w_A Peptidyl-prolyl CIS-tra 100.0 1.1E-51 3.9E-56 337.7 21.4 163 1-173 1-164 (165)
7 2cmt_A Peptidyl-prolyl CIS-tra 100.0 2.4E-51 8.3E-56 337.3 21.8 163 1-173 8-171 (172)
8 2poy_A Peptidyl-prolyl CIS-tra 100.0 1.6E-51 5.4E-56 342.0 20.8 169 2-172 18-186 (186)
9 3pmp_A Cyclophilin A; peptidyl 100.0 2.8E-51 9.7E-56 335.5 21.4 162 2-173 1-163 (164)
10 1mzw_A Cyclophilin H, U-snRNP- 100.0 1.7E-51 5.7E-56 340.2 19.7 169 2-173 9-177 (177)
11 2haq_A Cyclophilin; rotamase, 100.0 1.7E-51 6E-56 337.5 19.5 163 1-173 9-172 (172)
12 2r99_A Peptidyl-prolyl CIS-tra 100.0 5.7E-51 2E-55 335.7 21.8 163 1-173 9-172 (173)
13 1qng_A Peptidyl-prolyl CIS-tra 100.0 3E-51 1E-55 336.8 19.8 169 2-173 2-170 (170)
14 3ich_A Peptidyl-prolyl CIS-tra 100.0 2.2E-51 7.5E-56 342.0 18.6 169 3-180 15-186 (188)
15 3rdd_A Peptidyl-prolyl CIS-tra 100.0 1.7E-50 5.7E-55 335.9 20.3 164 1-174 20-184 (184)
16 3k2c_A Peptidyl-prolyl CIS-tra 100.0 4.9E-50 1.7E-54 335.2 21.5 164 1-174 25-191 (193)
17 1z81_A Cyclophilin; structural 100.0 2.6E-50 8.9E-55 343.3 19.3 169 2-173 58-229 (229)
18 4fru_A Cyclophilin B, peptidyl 100.0 5.1E-50 1.7E-54 334.2 19.7 164 3-174 12-175 (185)
19 2ose_A Probable peptidyl-proly 100.0 9.2E-49 3.2E-53 336.3 16.4 178 2-182 13-215 (234)
20 2c3b_A Ppiase, cyclophilin; is 100.0 9.3E-49 3.2E-53 322.3 13.8 160 5-173 4-172 (172)
21 2poe_A Cyclophilin-like protei 100.0 2.5E-47 8.5E-52 316.8 17.9 154 15-180 23-181 (185)
22 2ok3_A Peptidyl-prolyl CIS-tra 100.0 4.6E-47 1.6E-51 309.4 17.6 153 15-179 7-161 (161)
23 1zkc_A Peptidyl-prolyl CIS-tra 100.0 1.1E-46 3.7E-51 314.7 17.3 154 15-180 26-181 (197)
24 2x7k_A Peptidyl-prolyl CIS-tra 100.0 1.4E-46 4.7E-51 307.6 17.5 155 2-173 10-165 (166)
25 2b71_A Cyclophilin-like protei 100.0 1.2E-46 4.2E-51 314.4 17.2 157 3-176 38-195 (196)
26 3bo7_A Peptidyl-prolyl CIS-tra 100.0 1.3E-46 4.4E-51 317.1 17.4 161 3-180 6-179 (201)
27 2fu0_A Cyclophilin, putative; 100.0 4.3E-46 1.5E-50 302.9 17.2 154 3-173 5-159 (160)
28 2k7n_A Peptidyl-prolyl CIS-tra 100.0 7.7E-46 2.6E-50 310.6 17.1 161 2-179 10-171 (203)
29 2hq6_A Serologically defined c 100.0 1.3E-45 4.4E-50 306.2 16.9 159 3-179 24-185 (185)
30 1w74_A Peptidyl-prolyl CIS-tra 100.0 3.3E-45 1.1E-49 305.0 18.5 163 2-173 22-191 (191)
31 2a2n_A Peptidylprolyl isomeras 100.0 1.2E-45 4.1E-50 304.3 15.0 152 9-172 22-175 (176)
32 3bkp_A Cyclophilin; malaria, i 100.0 3.6E-44 1.2E-48 307.1 17.2 162 3-182 21-201 (232)
33 1v9t_A Cyclophilin B; beta bar 100.0 8.2E-44 2.8E-48 291.9 15.0 153 2-173 3-165 (166)
34 3s6m_A Peptidyl-prolyl CIS-tra 100.0 7E-43 2.4E-47 287.0 14.7 153 2-173 2-167 (167)
35 1lop_A Cyclophilin A; rotamase 100.0 5.3E-43 1.8E-47 286.5 12.5 144 15-173 6-163 (164)
36 3rfy_A Peptidyl-prolyl CIS-tra 100.0 3.1E-37 1.1E-41 278.6 9.0 137 3-152 170-344 (369)
37 3rkv_A Putative peptidylprolyl 99.7 6.8E-17 2.3E-21 130.8 11.7 107 205-311 4-110 (162)
38 2hr2_A Hypothetical protein; a 99.6 4E-15 1.4E-19 120.2 12.4 97 209-311 8-115 (159)
39 4gco_A Protein STI-1; structur 99.6 2.1E-15 7.3E-20 117.6 9.2 83 211-311 12-94 (126)
40 4gcn_A Protein STI-1; structur 99.5 2.6E-14 8.7E-19 111.4 7.1 85 209-311 5-96 (127)
41 1kt0_A FKBP51, 51 kDa FK506-bi 99.4 1.6E-12 5.6E-17 123.1 13.1 105 204-311 260-364 (457)
42 3upv_A Heat shock protein STI1 99.4 8.1E-13 2.8E-17 101.8 9.1 83 211-311 3-85 (126)
43 2l6j_A TPR repeat-containing p 99.3 2.8E-12 9.5E-17 95.8 8.8 84 210-311 2-91 (111)
44 3gyz_A Chaperone protein IPGC; 99.3 3.5E-12 1.2E-16 102.6 8.6 83 211-311 35-117 (151)
45 1p5q_A FKBP52, FK506-binding p 99.3 1.5E-11 5.2E-16 111.6 13.2 104 205-311 140-243 (336)
46 2if4_A ATFKBP42; FKBP-like, al 99.3 5.6E-12 1.9E-16 114.6 8.9 110 201-311 168-277 (338)
47 3sz7_A HSC70 cochaperone (SGT) 99.3 9.4E-12 3.2E-16 100.4 9.3 84 210-311 9-92 (164)
48 2fbn_A 70 kDa peptidylprolyl i 99.2 2.2E-11 7.4E-16 101.4 8.9 120 187-311 16-135 (198)
49 4ga2_A E3 SUMO-protein ligase 99.2 8.8E-11 3E-15 93.8 9.1 82 212-311 31-112 (150)
50 2vgx_A Chaperone SYCD; alterna 99.2 8.4E-11 2.9E-15 93.8 8.9 83 211-311 20-102 (148)
51 3q49_B STIP1 homology and U bo 99.2 1.1E-10 3.8E-15 90.5 8.9 83 211-311 8-90 (137)
52 4gco_A Protein STI-1; structur 99.1 1.2E-10 4E-15 90.4 8.4 79 212-308 47-125 (126)
53 2xcb_A PCRH, regulatory protei 99.1 1.5E-10 5E-15 91.3 8.9 83 211-311 17-99 (142)
54 1hxi_A PEX5, peroxisome target 99.1 2.2E-10 7.7E-15 88.1 9.0 81 213-311 18-98 (121)
55 2c2l_A CHIP, carboxy terminus 99.1 1.5E-10 5.2E-15 102.2 8.2 83 211-311 3-85 (281)
56 1na3_A Designed protein CTPR2; 99.1 4E-10 1.4E-14 80.7 9.0 83 211-311 8-90 (91)
57 1elw_A TPR1-domain of HOP; HOP 99.0 7.5E-10 2.6E-14 82.5 8.9 84 210-311 2-85 (118)
58 1a17_A Serine/threonine protei 99.0 8.7E-10 3E-14 87.7 9.5 89 205-311 6-94 (166)
59 3urz_A Uncharacterized protein 99.0 1.3E-09 4.4E-14 91.6 10.5 83 211-311 3-101 (208)
60 2dba_A Smooth muscle cell asso 99.0 1.4E-09 4.8E-14 84.8 9.5 86 211-311 27-112 (148)
61 2kc7_A BFR218_protein; tetratr 99.0 1.8E-09 6.2E-14 79.0 8.3 76 215-308 3-81 (99)
62 2kck_A TPR repeat; tetratricop 99.0 1.5E-09 5E-14 80.2 7.9 82 212-311 6-89 (112)
63 3urz_A Uncharacterized protein 99.0 1.8E-09 6E-14 90.8 8.9 76 217-310 59-134 (208)
64 2lni_A Stress-induced-phosphop 98.9 1.2E-09 4.2E-14 83.4 6.8 82 211-310 15-96 (133)
65 4ga2_A E3 SUMO-protein ligase 98.9 1.4E-09 4.8E-14 86.7 6.8 76 218-311 3-78 (150)
66 4gyw_A UDP-N-acetylglucosamine 98.9 1.7E-09 5.9E-14 107.8 8.7 100 211-310 8-123 (723)
67 2vyi_A SGTA protein; chaperone 98.9 5.4E-09 1.8E-13 79.1 9.5 84 209-310 9-92 (131)
68 4i17_A Hypothetical protein; T 98.9 3.1E-09 1E-13 89.9 8.7 81 213-311 8-89 (228)
69 1wao_1 Serine/threonine protei 98.9 1.4E-09 4.6E-14 103.5 7.1 84 210-311 4-87 (477)
70 3k9i_A BH0479 protein; putativ 98.9 2E-09 6.7E-14 81.8 6.5 70 224-311 2-74 (117)
71 2xev_A YBGF; tetratricopeptide 98.9 4.1E-09 1.4E-13 80.5 7.9 84 213-311 3-89 (129)
72 3sz7_A HSC70 cochaperone (SGT) 98.9 3.2E-09 1.1E-13 85.3 7.4 80 212-309 45-124 (164)
73 1elr_A TPR2A-domain of HOP; HO 98.9 3.4E-09 1.2E-13 80.4 7.0 83 211-311 3-92 (131)
74 3gyz_A Chaperone protein IPGC; 98.9 4E-09 1.4E-13 84.6 7.3 79 212-310 70-148 (151)
75 3vtx_A MAMA; tetratricopeptide 98.9 7.7E-09 2.6E-13 84.2 9.2 82 211-310 4-85 (184)
76 2pl2_A Hypothetical conserved 98.9 4.4E-09 1.5E-13 88.9 7.9 83 211-311 4-86 (217)
77 3upv_A Heat shock protein STI1 98.9 5.8E-09 2E-13 79.8 7.8 83 212-312 38-126 (126)
78 1zu2_A Mitochondrial import re 98.8 2.7E-09 9.2E-14 85.8 5.5 73 221-311 11-93 (158)
79 2h6f_A Protein farnesyltransfe 98.8 1E-08 3.4E-13 94.8 9.8 81 211-309 96-177 (382)
80 2h6f_A Protein farnesyltransfe 98.8 4E-09 1.4E-13 97.5 7.1 81 212-310 131-212 (382)
81 4gyw_A UDP-N-acetylglucosamine 98.8 6.7E-09 2.3E-13 103.6 8.9 99 213-311 44-158 (723)
82 2gw1_A Mitochondrial precursor 98.8 8.1E-09 2.8E-13 97.0 9.0 85 208-311 2-86 (514)
83 3fp2_A TPR repeat-containing p 98.8 4.5E-09 1.5E-13 99.6 7.1 92 202-311 15-106 (537)
84 2hr2_A Hypothetical protein; a 98.8 4.6E-09 1.6E-13 84.6 5.7 76 212-298 57-136 (159)
85 1p5q_A FKBP52, FK506-binding p 98.8 1.1E-08 3.8E-13 92.6 8.9 82 212-311 196-277 (336)
86 2v5f_A Prolyl 4-hydroxylase su 98.8 3.4E-08 1.2E-12 73.8 9.5 83 212-305 5-87 (104)
87 3rkv_A Putative peptidylprolyl 98.8 1.7E-08 5.8E-13 80.8 8.4 80 211-308 62-142 (162)
88 2lni_A Stress-induced-phosphop 98.8 1.7E-08 5.7E-13 76.9 7.8 82 212-311 50-131 (133)
89 1kt0_A FKBP51, 51 kDa FK506-bi 98.8 1.3E-08 4.6E-13 96.1 8.1 82 212-311 317-398 (457)
90 2pl2_A Hypothetical conserved 98.7 1.6E-08 5.4E-13 85.4 7.4 82 212-311 39-131 (217)
91 3vtx_A MAMA; tetratricopeptide 98.7 3.2E-08 1.1E-12 80.5 8.9 53 259-311 102-154 (184)
92 2vgx_A Chaperone SYCD; alterna 98.7 2E-08 6.9E-13 79.8 7.3 78 212-307 55-132 (148)
93 2vyi_A SGTA protein; chaperone 98.7 4.7E-08 1.6E-12 73.8 9.0 82 212-311 46-127 (131)
94 1hh8_A P67PHOX, NCF-2, neutrop 98.7 3.4E-08 1.2E-12 82.1 8.8 82 212-311 37-134 (213)
95 2xcb_A PCRH, regulatory protei 98.7 1.8E-08 6.1E-13 79.1 6.5 80 212-309 52-131 (142)
96 2fbn_A 70 kDa peptidylprolyl i 98.7 4.2E-08 1.4E-12 81.2 8.9 82 212-311 88-169 (198)
97 3k9i_A BH0479 protein; putativ 98.7 4E-08 1.4E-12 74.3 7.9 73 211-301 26-98 (117)
98 1na0_A Designed protein CTPR3; 98.7 8.7E-08 3E-12 71.6 9.0 99 212-310 9-123 (125)
99 1hh8_A P67PHOX, NCF-2, neutrop 98.7 3.4E-08 1.2E-12 82.1 7.3 80 211-311 5-84 (213)
100 3ma5_A Tetratricopeptide repea 98.7 1.5E-08 5.1E-13 74.8 4.4 69 212-298 7-75 (100)
101 1zu2_A Mitochondrial import re 98.7 3E-08 1E-12 79.6 6.3 76 211-306 35-131 (158)
102 3uq3_A Heat shock protein STI1 98.7 7.1E-08 2.4E-12 81.8 9.1 82 212-311 139-220 (258)
103 1elw_A TPR1-domain of HOP; HOP 98.7 9.7E-08 3.3E-12 70.7 8.7 80 212-309 38-117 (118)
104 2yhc_A BAMD, UPF0169 lipoprote 98.7 5.3E-08 1.8E-12 82.5 8.2 84 212-310 4-90 (225)
105 4i17_A Hypothetical protein; T 98.7 8E-08 2.7E-12 81.0 9.0 81 213-311 43-130 (228)
106 2e2e_A Formate-dependent nitri 98.6 1E-07 3.4E-12 77.2 8.5 82 212-311 44-128 (177)
107 1na0_A Designed protein CTPR3; 98.6 1.8E-07 6.1E-12 69.9 9.0 50 262-311 41-90 (125)
108 1ihg_A Cyclophilin 40; ppiase 98.6 7.9E-08 2.7E-12 88.3 8.3 82 212-311 273-354 (370)
109 3ieg_A DNAJ homolog subfamily 98.6 1.1E-07 3.7E-12 84.6 8.9 83 211-311 2-84 (359)
110 2pzi_A Probable serine/threoni 98.6 8.2E-08 2.8E-12 95.2 8.8 82 212-311 433-514 (681)
111 1xnf_A Lipoprotein NLPI; TPR, 98.6 1.2E-07 4E-12 81.5 8.5 83 211-311 42-124 (275)
112 3qky_A Outer membrane assembly 98.6 8.4E-08 2.9E-12 82.8 7.3 85 211-310 14-101 (261)
113 4eqf_A PEX5-related protein; a 98.6 1.5E-07 5.1E-12 84.9 8.9 83 211-311 64-146 (365)
114 1hxi_A PEX5, peroxisome target 98.5 5.8E-08 2E-12 74.3 4.7 70 212-299 51-120 (121)
115 1a17_A Serine/threonine protei 98.5 2.9E-07 9.8E-12 72.8 8.9 78 212-307 47-124 (166)
116 2dba_A Smooth muscle cell asso 98.5 2.6E-07 8.9E-12 71.6 8.5 80 212-309 65-144 (148)
117 1elr_A TPR2A-domain of HOP; HO 98.5 6.7E-07 2.3E-11 67.4 10.6 88 212-311 38-125 (131)
118 3uq3_A Heat shock protein STI1 98.5 1E-07 3.5E-12 80.9 6.4 82 211-311 4-92 (258)
119 3u3w_A Transcriptional activat 98.5 1.9E-07 6.7E-12 82.2 8.3 90 211-311 154-249 (293)
120 4abn_A Tetratricopeptide repea 98.5 2.5E-07 8.6E-12 87.6 9.2 82 212-311 213-305 (474)
121 4eqf_A PEX5-related protein; a 98.5 3.1E-07 1.1E-11 82.7 9.0 82 212-311 213-294 (365)
122 2pzi_A Probable serine/threoni 98.5 6.8E-08 2.3E-12 95.7 4.7 98 213-310 468-580 (681)
123 2e2e_A Formate-dependent nitri 98.5 3E-08 1E-12 80.4 1.7 81 212-310 10-91 (177)
124 2kat_A Uncharacterized protein 98.5 3.5E-07 1.2E-11 68.6 7.3 79 212-308 19-99 (115)
125 2y4t_A DNAJ homolog subfamily 98.5 4.1E-07 1.4E-11 84.1 9.1 83 211-311 25-107 (450)
126 4gcn_A Protein STI-1; structur 98.5 6.4E-07 2.2E-11 69.0 8.8 74 212-296 42-115 (127)
127 2xev_A YBGF; tetratricopeptide 98.5 6.5E-07 2.2E-11 67.9 8.7 79 213-306 40-118 (129)
128 2vsy_A XCC0866; transferase, g 98.5 3E-07 1E-11 88.8 8.3 81 212-310 23-103 (568)
129 1fch_A Peroxisomal targeting s 98.5 3.2E-07 1.1E-11 82.4 8.0 83 211-311 63-145 (368)
130 3u4t_A TPR repeat-containing p 98.4 2.4E-07 8.3E-12 79.6 6.6 79 213-309 75-154 (272)
131 2vq2_A PILW, putative fimbrial 98.4 6.9E-07 2.3E-11 74.0 9.0 83 211-311 7-89 (225)
132 2fo7_A Synthetic consensus TPR 98.4 8.5E-07 2.9E-11 66.8 8.8 75 219-311 42-116 (136)
133 1fch_A Peroxisomal targeting s 98.4 5.4E-07 1.9E-11 80.8 9.0 82 212-311 217-298 (368)
134 2if4_A ATFKBP42; FKBP-like, al 98.4 1.2E-07 4.1E-12 85.9 4.3 78 214-309 232-309 (338)
135 1qqe_A Vesicular transport pro 98.4 1.1E-06 3.9E-11 77.3 10.5 88 212-311 117-212 (292)
136 1wao_1 Serine/threonine protei 98.4 3.6E-07 1.2E-11 86.8 7.7 78 212-307 40-117 (477)
137 3mkr_A Coatomer subunit epsilo 98.4 4.2E-07 1.4E-11 80.5 7.6 52 260-311 196-247 (291)
138 2fo7_A Synthetic consensus TPR 98.4 9.9E-07 3.4E-11 66.4 8.7 81 213-311 2-82 (136)
139 4abn_A Tetratricopeptide repea 98.4 3.1E-07 1.1E-11 87.0 7.0 82 211-311 101-183 (474)
140 3as5_A MAMA; tetratricopeptide 98.4 1.1E-06 3.7E-11 70.3 9.0 48 263-310 109-156 (186)
141 3as5_A MAMA; tetratricopeptide 98.4 1E-06 3.5E-11 70.4 8.9 82 212-311 42-123 (186)
142 2kat_A Uncharacterized protein 98.4 4.2E-07 1.4E-11 68.1 6.2 64 230-311 3-66 (115)
143 3q49_B STIP1 homology and U bo 98.4 4.9E-07 1.7E-11 69.4 6.6 78 212-307 43-125 (137)
144 2vsy_A XCC0866; transferase, g 98.4 8.3E-07 2.9E-11 85.6 9.0 82 212-311 57-138 (568)
145 3hym_B Cell division cycle pro 98.4 5.9E-07 2E-11 79.0 7.0 80 212-309 236-315 (330)
146 2qfc_A PLCR protein; TPR, HTH, 98.3 8.8E-07 3E-11 77.9 7.9 90 211-311 154-249 (293)
147 3cv0_A Peroxisome targeting si 98.3 1.3E-06 4.5E-11 76.6 9.0 83 211-311 20-102 (327)
148 2q7f_A YRRB protein; TPR, prot 98.3 1.6E-06 5.4E-11 72.9 9.1 80 212-309 57-136 (243)
149 3ieg_A DNAJ homolog subfamily 98.3 2.4E-06 8.2E-11 75.7 10.7 83 215-311 237-319 (359)
150 2ho1_A Type 4 fimbrial biogene 98.3 8.9E-07 3.1E-11 75.2 7.3 82 211-310 36-117 (252)
151 2q7f_A YRRB protein; TPR, prot 98.3 1.6E-06 5.6E-11 72.8 8.8 80 212-309 91-170 (243)
152 1w3b_A UDP-N-acetylglucosamine 98.3 6.1E-07 2.1E-11 81.6 6.5 99 213-311 272-386 (388)
153 3hym_B Cell division cycle pro 98.3 1.6E-06 5.6E-11 76.1 8.6 90 213-311 194-283 (330)
154 3qky_A Outer membrane assembly 98.3 1.2E-06 4.3E-11 75.3 7.3 95 212-311 89-198 (261)
155 1w3b_A UDP-N-acetylglucosamine 98.3 1.1E-06 3.8E-11 79.8 7.3 98 212-309 67-180 (388)
156 1qqe_A Vesicular transport pro 98.3 2.1E-06 7.1E-11 75.7 8.8 88 212-311 77-171 (292)
157 3edt_B KLC 2, kinesin light ch 98.3 2.1E-06 7.1E-11 73.5 8.4 91 211-311 84-182 (283)
158 1pc2_A Mitochondria fission pr 98.3 5.8E-06 2E-10 65.7 10.2 78 212-307 32-114 (152)
159 2y4t_A DNAJ homolog subfamily 98.3 3.7E-06 1.3E-10 77.6 10.6 82 216-311 261-342 (450)
160 3u4t_A TPR repeat-containing p 98.3 1.9E-06 6.4E-11 73.9 7.9 83 214-311 39-121 (272)
161 3edt_B KLC 2, kinesin light ch 98.3 3.3E-06 1.1E-10 72.2 9.3 91 211-311 42-140 (283)
162 3cv0_A Peroxisome targeting si 98.3 2.8E-06 9.6E-11 74.5 9.0 82 212-311 172-253 (327)
163 3ulq_A Response regulator aspa 98.3 4E-06 1.4E-10 76.3 10.2 89 211-311 183-277 (383)
164 3q15_A PSP28, response regulat 98.2 3.5E-06 1.2E-10 76.7 9.7 89 211-311 181-274 (378)
165 2r5s_A Uncharacterized protein 98.2 1.1E-06 3.7E-11 71.3 5.5 72 213-303 7-78 (176)
166 3ro3_A PINS homolog, G-protein 98.2 4.2E-06 1.4E-10 65.0 8.7 89 211-311 8-102 (164)
167 2ho1_A Type 4 fimbrial biogene 98.2 3E-06 1E-10 71.8 8.3 99 213-311 72-188 (252)
168 2kck_A TPR repeat; tetratricop 98.2 1.3E-06 4.3E-11 63.9 4.4 69 212-298 40-111 (112)
169 1xnf_A Lipoprotein NLPI; TPR, 98.2 4E-06 1.4E-10 71.7 8.1 80 218-311 11-90 (275)
170 2vq2_A PILW, putative fimbrial 98.2 4.9E-06 1.7E-10 68.7 8.3 76 215-308 116-192 (225)
171 3ma5_A Tetratricopeptide repea 98.2 2.4E-06 8.3E-11 62.7 5.6 51 261-311 4-54 (100)
172 3qou_A Protein YBBN; thioredox 98.2 3.2E-06 1.1E-10 74.4 7.3 81 212-310 117-231 (287)
173 2ifu_A Gamma-SNAP; membrane fu 98.2 4.9E-06 1.7E-10 73.8 8.4 87 211-310 115-207 (307)
174 3gw4_A Uncharacterized protein 98.1 1.1E-05 3.7E-10 65.9 9.2 89 211-311 25-120 (203)
175 3ro3_A PINS homolog, G-protein 98.1 1.2E-05 4E-10 62.4 8.8 88 212-311 49-142 (164)
176 4g1t_A Interferon-induced prot 98.1 9.3E-06 3.2E-10 75.6 9.4 90 212-310 51-148 (472)
177 2xpi_A Anaphase-promoting comp 98.1 5.9E-06 2E-10 79.2 7.7 81 212-310 516-596 (597)
178 4g1t_A Interferon-induced prot 98.1 1.7E-05 5.6E-10 73.8 10.4 90 212-311 94-185 (472)
179 3nf1_A KLC 1, kinesin light ch 98.0 1.6E-05 5.4E-10 69.1 9.2 91 211-311 110-208 (311)
180 3fp2_A TPR repeat-containing p 98.0 9.3E-06 3.2E-10 76.6 8.2 82 212-311 310-391 (537)
181 3nf1_A KLC 1, kinesin light ch 98.0 1.6E-05 5.4E-10 69.1 8.9 91 211-311 26-124 (311)
182 4a1s_A PINS, partner of inscut 98.0 1E-05 3.5E-10 73.7 8.0 87 210-310 46-138 (411)
183 3ulq_A Response regulator aspa 98.0 1.6E-05 5.6E-10 72.2 9.1 90 211-311 142-237 (383)
184 1dce_A Protein (RAB geranylger 98.0 1.4E-05 4.9E-10 77.4 8.8 82 212-311 63-156 (567)
185 3qou_A Protein YBBN; thioredox 98.0 1.1E-05 3.7E-10 70.9 7.3 101 211-311 150-268 (287)
186 4a1s_A PINS, partner of inscut 98.0 2E-05 6.9E-10 71.8 8.9 88 212-311 86-179 (411)
187 2c2l_A CHIP, carboxy terminus 98.0 2E-06 6.8E-11 75.6 1.8 68 212-297 38-105 (281)
188 3ro2_A PINS homolog, G-protein 98.0 1.9E-05 6.3E-10 68.9 8.1 84 212-309 5-94 (338)
189 3sf4_A G-protein-signaling mod 97.9 2E-05 6.7E-10 71.2 8.0 85 211-309 8-98 (406)
190 2yhc_A BAMD, UPF0169 lipoprote 97.9 1.3E-05 4.4E-10 67.5 6.2 74 213-301 42-133 (225)
191 2gw1_A Mitochondrial precursor 97.9 1.8E-05 6.2E-10 73.9 7.7 79 215-311 375-462 (514)
192 2ifu_A Gamma-SNAP; membrane fu 97.9 1.6E-05 5.3E-10 70.5 6.8 85 214-311 78-168 (307)
193 3n71_A Histone lysine methyltr 97.9 1.9E-05 6.3E-10 75.2 7.5 99 203-311 300-406 (490)
194 2r5s_A Uncharacterized protein 97.9 2.1E-05 7.3E-10 63.5 6.6 100 212-311 40-157 (176)
195 3dra_A Protein farnesyltransfe 97.9 5.2E-05 1.8E-09 67.6 9.4 74 217-308 37-113 (306)
196 3sf4_A G-protein-signaling mod 97.9 4.2E-05 1.4E-09 69.0 8.9 88 212-311 187-280 (406)
197 2l6j_A TPR repeat-containing p 97.8 3.8E-05 1.3E-09 56.1 6.9 48 264-311 4-51 (111)
198 1ouv_A Conserved hypothetical 97.8 6.1E-05 2.1E-09 64.8 9.2 96 212-310 6-122 (273)
199 1dce_A Protein (RAB geranylger 97.8 3.1E-05 1.1E-09 75.0 8.0 85 209-311 25-120 (567)
200 2xpi_A Anaphase-promoting comp 97.8 5.1E-05 1.7E-09 72.6 8.7 79 212-308 373-451 (597)
201 3qww_A SET and MYND domain-con 97.8 5.6E-05 1.9E-09 70.7 8.3 96 206-311 292-395 (433)
202 3ro2_A PINS homolog, G-protein 97.8 7.6E-05 2.6E-09 65.0 8.7 88 212-311 43-136 (338)
203 3dra_A Protein farnesyltransfe 97.8 5.4E-05 1.9E-09 67.5 7.6 29 212-240 67-97 (306)
204 3q15_A PSP28, response regulat 97.8 6.7E-05 2.3E-09 68.1 8.4 90 211-311 140-235 (378)
205 1na3_A Designed protein CTPR2; 97.7 9.7E-05 3.3E-09 51.8 7.1 50 262-311 7-56 (91)
206 3bee_A Putative YFRE protein; 97.7 6.3E-05 2.2E-09 54.7 6.0 68 212-297 6-76 (93)
207 3mkr_A Coatomer subunit epsilo 97.7 5.9E-05 2E-09 66.5 6.8 72 212-301 200-272 (291)
208 3qww_A SET and MYND domain-con 97.7 7.3E-05 2.5E-09 69.9 7.3 73 211-293 339-411 (433)
209 2ond_A Cleavage stimulation fa 97.7 9.8E-05 3.3E-09 65.2 7.8 66 228-310 80-146 (308)
210 3u3w_A Transcriptional activat 97.6 0.00014 4.9E-09 63.6 8.4 71 211-293 195-266 (293)
211 3gw4_A Uncharacterized protein 97.6 0.00014 5E-09 59.0 7.8 90 211-311 65-160 (203)
212 3n71_A Histone lysine methyltr 97.6 0.00012 4.2E-09 69.5 8.2 89 211-309 350-446 (490)
213 1ouv_A Conserved hypothetical 97.6 0.00021 7.1E-09 61.4 8.9 46 263-310 109-158 (273)
214 2qfc_A PLCR protein; TPR, HTH, 97.6 0.00041 1.4E-08 60.6 10.9 89 211-311 74-168 (293)
215 3rjv_A Putative SEL1 repeat pr 97.6 0.00018 6.1E-09 60.0 8.0 78 214-310 87-174 (212)
216 3qwp_A SET and MYND domain-con 97.6 0.00013 4.6E-09 68.1 7.9 91 211-311 328-426 (429)
217 3q7a_A Farnesyltransferase alp 97.6 0.00037 1.3E-08 63.1 10.4 68 226-311 68-136 (349)
218 4f3v_A ESX-1 secretion system 97.6 0.00013 4.3E-09 64.2 7.1 81 214-311 137-221 (282)
219 3qwp_A SET and MYND domain-con 97.5 0.00018 6.1E-09 67.2 7.9 91 211-311 286-384 (429)
220 3q7a_A Farnesyltransferase alp 97.5 0.00016 5.5E-09 65.5 7.0 82 212-311 88-172 (349)
221 3dss_A Geranylgeranyl transfer 97.5 0.00032 1.1E-08 63.1 8.8 81 213-311 65-157 (331)
222 2ond_A Cleavage stimulation fa 97.5 0.00012 4E-09 64.7 5.9 71 214-302 101-172 (308)
223 2kc7_A BFR218_protein; tetratr 97.5 0.00023 7.8E-09 51.1 6.3 45 267-311 3-48 (99)
224 3rjv_A Putative SEL1 repeat pr 97.5 0.00021 7.1E-09 59.6 6.6 100 211-310 17-137 (212)
225 3dss_A Geranylgeranyl transfer 97.4 0.00041 1.4E-08 62.4 8.7 82 212-311 108-192 (331)
226 1hz4_A MALT regulatory protein 97.4 0.0011 3.9E-08 59.4 11.0 86 215-310 96-186 (373)
227 1nzn_A CGI-135 protein, fissio 97.3 0.0014 4.8E-08 50.1 8.9 46 262-307 72-117 (126)
228 3o48_A Mitochondria fission 1 97.3 0.0013 4.5E-08 50.6 8.4 45 263-307 77-121 (134)
229 1hz4_A MALT regulatory protein 97.1 0.0016 5.5E-08 58.4 9.2 87 212-310 53-147 (373)
230 4f3v_A ESX-1 secretion system 97.1 0.001 3.4E-08 58.4 7.5 75 212-303 171-246 (282)
231 4b4t_Q 26S proteasome regulato 97.1 0.0014 4.7E-08 60.0 8.4 90 211-301 3-92 (434)
232 1y8m_A FIS1; mitochondria, unk 97.0 0.0024 8.1E-08 49.8 8.0 45 263-307 76-120 (144)
233 1klx_A Cysteine rich protein B 97.0 0.0023 7.8E-08 49.5 7.8 71 218-310 31-105 (138)
234 3ffl_A Anaphase-promoting comp 97.0 0.0024 8.1E-08 51.1 7.6 95 211-308 62-165 (167)
235 1klx_A Cysteine rich protein B 96.6 0.0057 1.9E-07 47.2 7.4 72 212-305 57-136 (138)
236 4b4t_Q 26S proteasome regulato 96.4 0.0041 1.4E-07 56.7 6.3 71 212-294 135-205 (434)
237 2ooe_A Cleavage stimulation fa 96.4 0.0046 1.6E-07 58.6 6.7 81 212-309 272-367 (530)
238 3e4b_A ALGK; tetratricopeptide 96.4 0.0044 1.5E-07 57.9 6.2 93 214-309 178-294 (452)
239 2ooe_A Cleavage stimulation fa 96.4 0.0046 1.6E-07 58.6 6.4 35 275-309 402-436 (530)
240 1b89_A Protein (clathrin heavy 96.4 0.012 4.1E-07 54.8 8.8 99 209-310 145-253 (449)
241 2xm6_A Protein corresponding t 96.3 0.0047 1.6E-07 57.9 6.3 29 212-240 328-359 (490)
242 1b89_A Protein (clathrin heavy 96.3 0.0039 1.3E-07 58.1 5.2 65 214-309 124-188 (449)
243 2xm6_A Protein corresponding t 96.1 0.018 6.1E-07 53.9 9.0 29 212-240 39-71 (490)
244 3e4b_A ALGK; tetratricopeptide 96.1 0.011 3.9E-07 55.0 7.6 72 214-309 250-329 (452)
245 2ff4_A Probable regulatory pro 96.0 0.051 1.7E-06 49.7 11.4 100 211-310 114-217 (388)
246 1xi4_A Clathrin heavy chain; a 95.8 0.014 4.8E-07 61.4 7.2 61 212-295 1105-1165(1630)
247 3bee_A Putative YFRE protein; 95.7 0.014 4.9E-07 41.9 4.8 48 264-311 6-56 (93)
248 1pc2_A Mitochondria fission pr 95.7 0.0069 2.3E-07 47.9 3.3 69 225-311 11-84 (152)
249 3ffl_A Anaphase-promoting comp 95.7 0.036 1.2E-06 44.2 7.5 89 214-311 22-135 (167)
250 3ly7_A Transcriptional activat 95.6 0.021 7.3E-07 51.8 6.8 62 218-298 283-344 (372)
251 1xi4_A Clathrin heavy chain; a 95.5 0.031 1.1E-06 58.9 8.3 45 266-310 1282-1326(1630)
252 3mv2_B Coatomer subunit epsilo 95.4 0.03 1E-06 49.6 7.0 77 215-307 103-183 (310)
253 3mv2_B Coatomer subunit epsilo 95.2 0.027 9.2E-07 50.0 5.8 65 227-310 193-267 (310)
254 2w2u_A Hypothetical P60 katani 94.9 0.094 3.2E-06 36.8 6.8 65 207-273 14-78 (83)
255 3u64_A Protein TP_0956; tetrat 94.7 0.099 3.4E-06 45.8 7.9 69 224-310 175-251 (301)
256 2v6y_A AAA family ATPase, P60 94.6 0.11 3.9E-06 36.4 6.7 65 208-274 7-71 (83)
257 2cpt_A SKD1 protein, vacuolar 94.4 0.16 5.5E-06 38.1 7.5 68 207-275 13-80 (117)
258 3ly7_A Transcriptional activat 94.3 0.17 5.9E-06 45.8 8.9 96 213-309 197-321 (372)
259 3kop_A Uncharacterized protein 94.2 0.27 9.4E-06 39.3 8.8 118 6-151 22-166 (188)
260 4gns_B Protein CSD3, chitin bi 94.1 0.28 9.5E-06 48.7 10.7 50 263-312 336-385 (754)
261 1wfd_A Hypothetical protein 15 93.3 0.32 1.1E-05 34.8 7.1 66 207-274 10-75 (93)
262 4a5x_A MITD1, MIT domain-conta 92.9 0.29 1E-05 34.5 6.2 35 211-245 15-49 (86)
263 4gns_B Protein CSD3, chitin bi 92.8 0.13 4.3E-06 51.2 5.7 59 214-290 339-397 (754)
264 2v6x_A Vacuolar protein sortin 92.5 0.34 1.2E-05 34.0 6.3 38 208-245 9-46 (85)
265 2nnz_A Hypothetical protein; b 92.4 0.65 2.2E-05 36.5 8.3 105 8-150 32-142 (153)
266 2v5f_A Prolyl 4-hydroxylase su 92.1 0.42 1.4E-05 34.4 6.6 46 266-311 7-59 (104)
267 3u64_A Protein TP_0956; tetrat 91.4 0.17 5.7E-06 44.3 4.3 64 215-296 202-272 (301)
268 3mv2_A Coatomer subunit alpha; 91.2 1.3 4.5E-05 39.1 9.7 85 214-298 116-241 (325)
269 2dl1_A Spartin; SPG20, MIT, st 88.4 2.2 7.6E-05 31.6 7.6 79 206-284 16-98 (116)
270 3mkr_B Coatomer subunit alpha; 86.6 3.2 0.00011 36.6 8.8 84 214-297 104-231 (320)
271 4b4t_R RPN7, 26S proteasome re 86.0 1.5 5.2E-05 40.4 7.0 66 213-293 132-197 (429)
272 2crb_A Nuclear receptor bindin 85.3 0.95 3.2E-05 32.0 3.9 36 209-244 12-47 (97)
273 1zbp_A Hypothetical protein VP 84.0 1.9 6.4E-05 37.1 6.0 69 219-305 4-74 (273)
274 2vkj_A TM1634; membrane protei 80.4 5.5 0.00019 27.9 6.1 32 210-241 51-82 (106)
275 2wb7_A PT26-6P; extra chromoso 80.4 2.2 7.7E-05 39.6 5.4 19 228-246 448-466 (526)
276 3mkq_A Coatomer beta'-subunit; 80.4 2.6 8.8E-05 41.3 6.4 76 212-291 681-763 (814)
277 3txn_A 26S proteasome regulato 80.3 8.1 0.00028 35.1 9.2 79 217-307 104-187 (394)
278 1nzn_A CGI-135 protein, fissio 79.6 2.7 9.2E-05 31.7 4.8 71 223-311 12-87 (126)
279 2ymb_A MITD1, MIT domain-conta 76.9 0.5 1.7E-05 40.4 0.0 38 208-245 19-56 (257)
280 2ff4_A Probable regulatory pro 75.7 4.8 0.00016 36.4 6.3 61 213-291 172-232 (388)
281 2o8p_A 14-3-3 domain containin 74.5 5.3 0.00018 33.3 5.7 59 225-293 138-197 (227)
282 1ya0_A SMG-7 transcript varian 74.1 8.5 0.00029 36.1 7.7 77 214-308 154-230 (497)
283 4h7y_A Dual specificity protei 72.7 7.7 0.00026 30.3 5.8 93 202-306 10-102 (161)
284 2npm_A 14-3-3 domain containin 70.7 11 0.00039 32.0 6.9 53 228-291 172-225 (260)
285 2br9_A 14-3-3E, 14-3-3 protein 70.3 9.9 0.00034 31.9 6.4 54 228-291 146-200 (234)
286 1o9d_A 14-3-3-like protein C; 70.0 8.8 0.0003 32.7 6.1 54 228-291 151-205 (260)
287 3efz_A 14-3-3 protein; 14-3-3, 68.2 12 0.00043 31.9 6.6 56 228-293 168-226 (268)
288 3ubw_A 14-3-3E, 14-3-3 protein 67.8 12 0.00041 31.9 6.4 54 228-291 172-226 (261)
289 3uzd_A 14-3-3 protein gamma; s 67.4 12 0.00042 31.5 6.4 54 228-291 147-201 (248)
290 2cfu_A SDSA1; SDS-hydrolase, l 66.9 28 0.00097 33.8 9.9 80 232-311 413-496 (658)
291 3mkq_B Coatomer subunit alpha; 64.9 15 0.00052 29.3 6.3 76 211-290 33-115 (177)
292 3iqu_A 14-3-3 protein sigma; s 64.1 16 0.00053 30.7 6.4 54 228-291 149-203 (236)
293 3ax2_A Mitochondrial import re 63.4 5.6 0.00019 26.8 2.9 28 215-242 20-47 (73)
294 4e6h_A MRNA 3'-END-processing 62.3 14 0.00047 36.2 6.7 59 217-293 348-407 (679)
295 3eab_A Spastin; spastin, MIT, 61.4 22 0.00075 24.9 5.7 68 210-277 14-85 (89)
296 4e6h_A MRNA 3'-END-processing 61.2 18 0.00063 35.3 7.3 72 215-304 69-145 (679)
297 2uy1_A Cleavage stimulation fa 60.9 18 0.0006 33.7 7.0 45 261-306 210-254 (493)
298 2crb_A Nuclear receptor bindin 60.7 16 0.00055 25.8 4.9 29 263-291 14-42 (97)
299 1om2_A Protein (mitochondrial 59.8 14 0.00049 26.2 4.6 39 205-243 13-51 (95)
300 3kae_A CDC27, possible protein 58.3 10 0.00036 30.4 4.0 26 266-291 64-89 (242)
301 2yin_A DOCK2, dedicator of cyt 55.7 26 0.00089 32.2 7.0 80 215-294 38-122 (436)
302 2vkj_A TM1634; membrane protei 55.7 50 0.0017 23.1 7.7 47 248-294 37-83 (106)
303 2k9u_B Filamin-binding LIM pro 55.7 6.6 0.00023 20.3 1.6 20 108-127 1-20 (26)
304 2zan_A Vacuolar protein sortin 55.6 2.5 8.4E-05 39.1 0.0 38 208-245 7-44 (444)
305 2ijq_A Hypothetical protein; s 55.4 61 0.0021 25.3 8.1 71 212-292 32-103 (161)
306 4gq2_M Nucleoporin NUP120; bet 53.1 30 0.001 35.2 7.6 95 216-310 844-948 (950)
307 2rpa_A Katanin P60 ATPase-cont 52.6 27 0.00092 23.8 4.9 32 214-245 14-45 (78)
308 2jpu_A ORF C02003 protein; sol 50.9 14 0.00047 27.9 3.5 33 209-241 4-36 (129)
309 3myv_A SUSD superfamily protei 43.7 61 0.0021 29.6 7.6 31 263-293 189-219 (454)
310 3kez_A Putative sugar binding 41.5 68 0.0023 29.4 7.5 31 263-293 195-225 (461)
311 1zx8_A Hypothetical protein TM 40.3 24 0.00082 26.8 3.4 96 18-150 22-123 (136)
312 4h7y_A Dual specificity protei 40.0 42 0.0014 26.2 4.8 56 224-297 72-127 (161)
313 3kae_A CDC27, possible protein 40.0 79 0.0027 25.3 6.4 82 211-296 61-146 (242)
314 1vh6_A Flagellar protein FLIS; 38.9 97 0.0033 23.6 6.8 68 209-276 30-97 (145)
315 2xze_A STAM-binding protein; h 38.7 42 0.0014 25.7 4.7 42 202-243 30-71 (146)
316 4a5x_A MITD1, MIT domain-conta 38.0 87 0.003 21.5 5.8 28 264-291 16-43 (86)
317 3mcx_A SUSD superfamily protei 37.6 72 0.0025 29.3 7.1 31 263-293 201-231 (477)
318 2oo2_A Hypothetical protein AF 37.3 42 0.0015 23.2 4.0 40 205-244 28-67 (86)
319 3mkq_A Coatomer beta'-subunit; 36.7 33 0.0011 33.2 4.8 26 265-290 682-707 (814)
320 2pmr_A Uncharacterized protein 35.9 46 0.0016 23.1 4.0 39 205-243 32-70 (87)
321 3snx_A SUSD homolog, putative 35.3 1E+02 0.0034 28.3 7.6 31 263-293 190-220 (460)
322 4b4t_P 26S proteasome regulato 34.9 2E+02 0.0068 26.1 9.5 69 211-291 136-204 (445)
323 4fhn_B Nucleoporin NUP120; pro 34.7 40 0.0014 35.0 5.2 77 216-296 846-931 (1139)
324 3ebb_A Phospholipase A2-activa 34.5 2.2E+02 0.0076 24.4 9.3 53 258-310 206-260 (304)
325 4b4t_P 26S proteasome regulato 34.3 1.5E+02 0.0052 26.9 8.6 72 211-293 176-247 (445)
326 3iqc_A FLIS, flagellar protein 33.2 1.5E+02 0.0051 22.1 8.4 81 209-291 33-115 (131)
327 3t5x_A PCI domain-containing p 32.6 1.4E+02 0.0047 24.0 7.2 45 262-306 12-56 (203)
328 1ya0_A SMG-7 transcript varian 32.6 94 0.0032 29.0 6.9 47 263-309 151-197 (497)
329 3lew_A SUSD-like carbohydrate 32.3 41 0.0014 31.3 4.4 32 262-293 201-232 (495)
330 2yhe_A SEC-alkyl sulfatase; hy 37.1 10 0.00035 37.0 0.0 46 266-311 463-508 (668)
331 1wfd_A Hypothetical protein 15 30.2 81 0.0028 21.9 4.7 24 268-291 19-42 (93)
332 2cpt_A SKD1 protein, vacuolar 29.4 76 0.0026 23.2 4.6 18 280-297 41-58 (117)
333 2wpv_A GET4, UPF0363 protein Y 29.1 2.4E+02 0.0083 24.4 8.5 67 212-291 13-80 (312)
334 3txn_A 26S proteasome regulato 28.3 3.2E+02 0.011 24.4 9.5 70 211-291 138-208 (394)
335 2rkl_A Vacuolar protein sortin 27.5 91 0.0031 19.4 3.9 38 206-243 14-51 (53)
336 2v6x_A Vacuolar protein sortin 27.3 1E+02 0.0034 20.9 4.7 24 268-291 17-40 (85)
337 2cwy_A Hypothetical protein TT 26.7 1.6E+02 0.0056 20.4 6.8 63 216-292 5-67 (94)
338 3jys_A SUSD superfamily protei 26.6 1.2E+02 0.0043 28.0 6.7 32 260-292 191-222 (499)
339 2uy1_A Cleavage stimulation fa 26.0 1E+02 0.0035 28.4 6.0 71 213-302 287-358 (493)
340 3o48_A Mitochondria fission 1 25.3 1.3E+02 0.0043 22.7 5.2 48 264-311 40-91 (134)
341 3l22_A SUSD superfamily protei 25.2 54 0.0018 29.9 3.8 29 263-291 200-228 (441)
342 2w2u_A Hypothetical P60 katani 23.9 1.7E+02 0.0059 19.8 7.0 26 266-291 21-46 (83)
343 2dl1_A Spartin; SPG20, MIT, st 23.9 1E+02 0.0035 22.6 4.3 19 277-295 42-60 (116)
344 1wol_A ST0689, 122AA long cons 23.6 94 0.0032 22.4 4.3 37 205-241 4-40 (122)
345 3ax2_A Mitochondrial import re 23.0 1.3E+02 0.0044 20.0 4.3 30 267-296 20-49 (73)
346 3qnk_A Putative lipoprotein; a 22.6 80 0.0027 29.4 4.5 31 263-293 181-211 (517)
347 1ufb_A TT1696 protein; structu 22.4 1E+02 0.0035 22.3 4.3 37 205-241 4-40 (127)
348 1x7f_A Outer surface protein; 22.2 38 0.0013 30.6 2.0 50 101-151 326-376 (385)
349 2v6y_A AAA family ATPase, P60 21.7 1.9E+02 0.0065 19.5 6.9 25 267-291 14-38 (83)
350 3qtm_A Uncharacterized protein 21.4 3.9E+02 0.013 22.9 9.6 93 214-310 24-131 (346)
351 1y8m_A FIS1; mitochondria, unk 21.3 2.7E+02 0.0094 21.1 6.5 48 264-311 39-90 (144)
352 1orj_A Flagellar protein FLIS; 21.3 2.6E+02 0.0087 20.8 7.5 81 209-291 26-110 (130)
353 4g26_A Pentatricopeptide repea 21.1 2.4E+02 0.0081 26.0 7.4 61 216-293 109-169 (501)
354 3jq1_A SUSD superfamily protei 21.0 1.6E+02 0.0054 27.1 6.1 29 264-292 180-208 (481)
355 2a9u_A Ubiquitin carboxyl-term 20.7 1.1E+02 0.0038 23.3 4.1 42 203-244 33-74 (144)
356 2hsb_A Hypothetical UPF0332 pr 20.4 1.1E+02 0.0037 22.1 4.0 35 205-239 5-39 (126)
357 2p0o_A Hypothetical protein DU 20.2 37 0.0013 30.5 1.5 50 101-151 300-350 (372)
No 1
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=100.00 E-value=1.3e-66 Score=483.44 Aligned_cols=306 Identities=51% Similarity=0.838 Sum_probs=282.3
Q ss_pred CCeEEEEEEECCeeeeEEEEEEeCCCCchhHHhHHHHhhCCCCCCCCCCCCceecCCEEEEeecCCeEEeCCCCCCCCCC
Q 021445 3 RPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKGVRFHRVIKGFMIQGGDISAGDGTG 82 (312)
Q Consensus 3 ~~~v~~d~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~~Y~g~~~~rv~~~~~iq~G~~~~~~~~~ 82 (312)
+|+|||||+|++++.|+|+|+||++.||+||+||++||++.++++..+|+++||+|+.||||+|+|||||||+..++|+|
T Consensus 15 ~~~v~~~~~~~~~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~~~g~g 94 (370)
T 1ihg_A 15 NPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTG 94 (370)
T ss_dssp SCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTTSSSSC
T ss_pred CCeEEEEEEECCEecccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECCcEEECCCCCCCCCCC
Confidence 89999999999999999999999999999999999999998877766677779999999999999999999999888999
Q ss_pred CCcccCCCCCCCcccccCCCcceEEeecCCCCCCCceEEEecCCCCCCCCCCceEEEEEeChHHHHHHhcccCCCCCCcc
Q 021445 83 GESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDNDCPI 162 (312)
Q Consensus 83 ~~~~~~~~~~~e~~~~~~~~~G~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~G~~vl~~i~~~~~~~~~~P~ 162 (312)
++++||.+|++|++.++|+++|+|||++.||+++|||||||+++.++||++|+|||+|++||+|+++|+..+++. ++|.
T Consensus 95 ~~~~~~~~~~~e~~~~~~~~~g~l~ma~~~~~~~~sqffi~~~~~~~ld~~~~vfG~v~~g~~v~~~i~~~~~~~-~~P~ 173 (370)
T 1ihg_A 95 GESIYGEKFEDENFHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAKILENVEVKG-EKPA 173 (370)
T ss_dssp CCBTTBSCBCCCCCCBCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCEET-TEES
T ss_pred CCCCCCCCcCCCcCCcCCCCCeEEEEeeCCCCCCCceEEEeCCCCcccCCCceEEEEEecCHHHHHHHHcCCCCC-Cccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999887 8999
Q ss_pred cceEEeeeeeeCCCCCCCCCccCCCCCCCCCCCCCCCCCCCChhhhhhhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHh
Q 021445 163 ADVTITDCGEIPEGADDGISNFFNDGDSYPDWPADLDQTPNELSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYL 242 (312)
Q Consensus 163 ~~i~I~~~g~l~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l 242 (312)
.+|+|.+|+++..+..+.....+...+.|+++++++.....+.++.++.+..++..|+.+++.|+|++|+..|++||+++
T Consensus 174 ~~v~I~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~ 253 (370)
T 1ihg_A 174 KLCVIAECGELKEGDDWGIFPKDGSGDSHPDFPEDADVDLKDVDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYV 253 (370)
T ss_dssp SCEEEEEEEEECTTCCCCCSCCSSSCCCSCSSGGGSSSCTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred eeEEEEEEEEeccCccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Confidence 99999999999887777665556789999999999987777899999999999999999999999999999999999976
Q ss_pred hhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHHHHHhhhh
Q 021445 243 DICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l~p~~~Ka~~rrg~a~~~L 311 (312)
...+ .....++...+.+....+|.|+|.||+++++|++|+.+|++||+++|.++++|+++|.+|..+
T Consensus 254 ~~~~--~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~ 320 (370)
T 1ihg_A 254 EGSR--AAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGL 320 (370)
T ss_dssp HHHH--HHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHT
T ss_pred hcCc--cccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHc
Confidence 5542 122334444578889999999999999999999999999999999999999999999999875
No 2
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00 E-value=2.6e-53 Score=351.32 Aligned_cols=171 Identities=59% Similarity=1.014 Sum_probs=163.0
Q ss_pred CCeEEEEEEECCeeeeEEEEEEeCCCCchhHHhHHHHhhCCCCCCCCCCCCceecCCEEEEeecCCeEEeCCCCCCCCCC
Q 021445 3 RPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKGVRFHRVIKGFMIQGGDISAGDGTG 82 (312)
Q Consensus 3 ~~~v~~d~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~~Y~g~~~~rv~~~~~iq~G~~~~~~~~~ 82 (312)
||+|||||++++++.|+|+||||++.||+||+||++||++.++.+..+++++||+|+.||||+|+|+|||||+..++|++
T Consensus 6 ~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~g 85 (177)
T 1a58_A 6 RRRVFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGDGTG 85 (177)
T ss_dssp CEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCCCTTCBEEEEETTTEEEECCCSSSSSSC
T ss_pred CcEEEEEEEECCEeceeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcceeCCCEEEEEECCCEEEeCCccCCCCCC
Confidence 89999999999999999999999999999999999999987665544566679999999999999999999998788999
Q ss_pred CCcccCCCCCCCcccccCCCcceEEeecCCCCCCCceEEEecCCCCCCCCCCceEEEEEeChHHHHHHhcccCCCCCCcc
Q 021445 83 GESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDNDCPI 162 (312)
Q Consensus 83 ~~~~~~~~~~~e~~~~~~~~~G~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~G~~vl~~i~~~~~~~~~~P~ 162 (312)
++++||..|++|++.++|+++|+||||+.+|++++|||||++.+.++||++|+|||+|++||+||++|+.++++.+++|.
T Consensus 86 g~si~g~~f~dE~~~~~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~~~~~~~P~ 165 (177)
T 1a58_A 86 GESIYGGMFDDEEFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLKTNSKNRPL 165 (177)
T ss_dssp CCCTTSSCBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBS
T ss_pred CCcccCCcccCcccCcccCCCeEEEEeeCCCCCceeEEEEECCCCCccCCCEEEEEEEEcCHHHHHHHHhCCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred cceEEeeeeee
Q 021445 163 ADVTITDCGEI 173 (312)
Q Consensus 163 ~~i~I~~~g~l 173 (312)
.+|+|.+||++
T Consensus 166 ~~v~I~~~G~l 176 (177)
T 1a58_A 166 ADVVILNCGEL 176 (177)
T ss_dssp SCEEEEEEEEE
T ss_pred CCeEEEEeEEE
Confidence 99999999997
No 3
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00 E-value=3e-53 Score=351.25 Aligned_cols=171 Identities=61% Similarity=1.036 Sum_probs=164.5
Q ss_pred CCeEEEEEEECCeeeeEEEEEEeCCCCchhHHhHHHHhhCCCCCCCCCCCCceecCCEEEEeecCCeEEeCCCCCCCCCC
Q 021445 3 RPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKGVRFHRVIKGFMIQGGDISAGDGTG 82 (312)
Q Consensus 3 ~~~v~~d~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~~Y~g~~~~rv~~~~~iq~G~~~~~~~~~ 82 (312)
||+||||+++++++.|+|+|+||++.||+||+||++||++.++.+..+++++||+|+.||||+|+|+|||||+..++|++
T Consensus 9 ~~~vf~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~g 88 (179)
T 2wfi_A 9 RPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRG 88 (179)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSSSSC
T ss_pred CCeEEEEEEECCccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCeECCCEEEEEECCCEEEcccccCCCCCC
Confidence 99999999999999999999999999999999999999998877666777889999999999999999999998788999
Q ss_pred CCcccCCCCCCCcccccCCCcceEEeecCCCCCCCceEEEecCCCCCCCCCCceEEEEEeChHHHHHHhcccCCCCCCcc
Q 021445 83 GESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDNDCPI 162 (312)
Q Consensus 83 ~~~~~~~~~~~e~~~~~~~~~G~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~G~~vl~~i~~~~~~~~~~P~ 162 (312)
++++||..|++|++.++|+++|+||||+.+|++++|||||++.+.|+||++|+|||+|++||+||++|+.++++.+++|.
T Consensus 89 g~si~g~~f~dE~~~~~h~~~G~lsMAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~t~~~~~P~ 168 (179)
T 2wfi_A 89 GESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPF 168 (179)
T ss_dssp CCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTSCBS
T ss_pred CCcccCCcccccccCcCcCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCeeEEEEEeCCHHHHHHHHcCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred cceEEeeeeee
Q 021445 163 ADVTITDCGEI 173 (312)
Q Consensus 163 ~~i~I~~~g~l 173 (312)
.+|+|.+||+|
T Consensus 169 ~~v~I~~~G~l 179 (179)
T 2wfi_A 169 AEVRILSCGEL 179 (179)
T ss_dssp SCEEEEEEEEC
T ss_pred CCeEEEeCeeC
Confidence 99999999986
No 4
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00 E-value=4.6e-53 Score=348.56 Aligned_cols=172 Identities=61% Similarity=1.093 Sum_probs=162.2
Q ss_pred CCCCeEEEEEEECCeeeeEEEEEEeCCCCchhHHhHHHHhhCCCCCCCCCCCCceecCCEEEEeecCCeEEeCCCCCCCC
Q 021445 1 MARPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKGVRFHRVIKGFMIQGGDISAGDG 80 (312)
Q Consensus 1 ~~~~~v~~d~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~~Y~g~~~~rv~~~~~iq~G~~~~~~~ 80 (312)
|.||+||||+++++++.|+|+||||++.||+||+||++||++.++.+. .++++||+|+.||||+|+|||||||+..++|
T Consensus 1 ~~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~-~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G 79 (173)
T 2igv_A 1 MSRSKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGK-SGKPLHFKGSKFHRIIPNFMIQGGDFTRGNG 79 (173)
T ss_dssp CCCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCT-TSSBSCCTTCBCCEEETTTEEEECCTTTSSS
T ss_pred CCCCEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhcCCCCCCc-cCccceECCCEEEEEECCCEEEcCCCCCCCC
Confidence 899999999999999999999999999999999999999998655442 4677799999999999999999999987889
Q ss_pred CCCCcccCCCCCCCcccccCCCcceEEeecCCCCCCCceEEEecCCCCCCCCCCceEEEEEeChHHHHHHhcccCCCCCC
Q 021445 81 TGGESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDNDC 160 (312)
Q Consensus 81 ~~~~~~~~~~~~~e~~~~~~~~~G~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~G~~vl~~i~~~~~~~~~~ 160 (312)
+++.++||.+|++|++.++|.++|+||||+.+|++++|||||++.+.++||++|+|||+|++||+||++|+.+++.. ++
T Consensus 80 ~gg~siyg~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~-~~ 158 (173)
T 2igv_A 80 TGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGSQS-GK 158 (173)
T ss_dssp SCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTT-SC
T ss_pred CCCCccCCCcccCcccccCCCCCeEEEEeeCCCCCcceEEEEEcCCccccCCCeeEEEEEecCHHHHHHHHhCCCCC-CC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998854 89
Q ss_pred cccceEEeeeeeeC
Q 021445 161 PIADVTITDCGEIP 174 (312)
Q Consensus 161 P~~~i~I~~~g~l~ 174 (312)
|..+|+|.+||++.
T Consensus 159 P~~~v~I~~~g~l~ 172 (173)
T 2igv_A 159 PVKDCMIADCGQLK 172 (173)
T ss_dssp CSSCEEEEEEEEEC
T ss_pred CCCCEEEEEeEEEc
Confidence 99999999999984
No 5
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.3e-53 Score=352.10 Aligned_cols=174 Identities=56% Similarity=0.961 Sum_probs=165.5
Q ss_pred CCCCeEEEEEEECCeeeeEEEEEEeCCCCchhHHhHHHHhhCCCCCCCCCCCCceecCCEEEEeecCCeEEeCCCCCCCC
Q 021445 1 MARPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKGVRFHRVIKGFMIQGGDISAGDG 80 (312)
Q Consensus 1 ~~~~~v~~d~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~~Y~g~~~~rv~~~~~iq~G~~~~~~~ 80 (312)
+.+|+||||+++++++.|+|+||||++.||+||+||++||++.++.+..+++.+||+|+.||||+|+|||||||+..++|
T Consensus 17 ~~~~~vf~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~Y~g~~FhRVi~~fmiQgGd~~~~~G 96 (192)
T 2he9_A 17 RGSPQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNG 96 (192)
T ss_dssp --CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSSS
T ss_pred cCCCeEEEEEEECCEecceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCeECCCEEEEEECCCEEEcCcccCCCC
Confidence 35899999999999999999999999999999999999999988777667778899999999999999999999987889
Q ss_pred CCCCcccCCCCCCCcccccCCCcceEEeecCCCCCCCceEEEecCCCCCCCCCCceEEEEEeChHHHHHHhcccCCCCCC
Q 021445 81 TGGESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDNDC 160 (312)
Q Consensus 81 ~~~~~~~~~~~~~e~~~~~~~~~G~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~G~~vl~~i~~~~~~~~~~ 160 (312)
++++++||.+|++|++.++|+++|+||||+.+|++++||||||+.+.++||++|+|||+|++||+||++|+.++++.+++
T Consensus 97 ~gg~siyg~~f~dE~~~l~h~~~G~lsMAn~gp~tngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~ 176 (192)
T 2he9_A 97 KGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDAASR 176 (192)
T ss_dssp SCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSC
T ss_pred CCCCcccCCcccCccccCCCCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCccEEEEEEeCHHHHHHHHcCCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998899
Q ss_pred cccceEEeeeeeeC
Q 021445 161 PIADVTITDCGEIP 174 (312)
Q Consensus 161 P~~~i~I~~~g~l~ 174 (312)
|..+|+|.+||++.
T Consensus 177 P~~~v~I~~~g~l~ 190 (192)
T 2he9_A 177 PYADVRVIDCGVLA 190 (192)
T ss_dssp BSSCEEEEEEEECC
T ss_pred CcCCeEEEEeEEEc
Confidence 99999999999985
No 6
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00 E-value=1.1e-51 Score=337.68 Aligned_cols=163 Identities=59% Similarity=0.983 Sum_probs=154.7
Q ss_pred CCCCeEEEEEEECCeeeeEEEEEEeCCCCchhHHhHHHHhhCCCCCCCCCCCCce-ecCCEEEEeecCCeEEeCCCCCCC
Q 021445 1 MARPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLH-YKGVRFHRVIKGFMIQGGDISAGD 79 (312)
Q Consensus 1 ~~~~~v~~d~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~~-Y~g~~~~rv~~~~~iq~G~~~~~~ 79 (312)
|.||+||||+++++++.|+|+||||++.||+||+||++||++.++ | |+|+.||||+|+|+|||||+..++
T Consensus 1 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g---------~~Y~g~~fhRvi~~f~iQgGd~~~~~ 71 (165)
T 2z6w_A 1 MGNPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKG---------FGYKGSTFHRVIPSFMCQAGDFTNHN 71 (165)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS---------CCSTTCBEEEEETTTEEEECCTTTSS
T ss_pred CCCCEEEEEEEECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCCC---------ccCcCCEEEEEECCCEEEeCCccCCC
Confidence 889999999999999999999999999999999999999996532 7 999999999999999999998788
Q ss_pred CCCCCcccCCCCCCCcccccCCCcceEEeecCCCCCCCceEEEecCCCCCCCCCCceEEEEEeChHHHHHHhcccCCCCC
Q 021445 80 GTGGESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDND 159 (312)
Q Consensus 80 ~~~~~~~~~~~~~~e~~~~~~~~~G~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~G~~vl~~i~~~~~~~~~ 159 (312)
|+++.++||.+|++|+..++|.++|+||||+.+|++++|||||++.+.++||++|+|||+|++||+||++|+.+++ .++
T Consensus 72 g~gg~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~~-~~~ 150 (165)
T 2z6w_A 72 GTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIEGMDVVKKIESFGS-KSG 150 (165)
T ss_dssp SSCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCC-TTS
T ss_pred CCCCCcccCCcccCcccccccCCCCEEEEeeCCCCCcccEEEEEcCCCcccCCCeeEEEEEEcCHHHHHHHHhCCC-CCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999986 458
Q ss_pred CcccceEEeeeeee
Q 021445 160 CPIADVTITDCGEI 173 (312)
Q Consensus 160 ~P~~~i~I~~~g~l 173 (312)
+|..+|+|.+||++
T Consensus 151 ~P~~~v~I~~~g~l 164 (165)
T 2z6w_A 151 RTSKKIVITDCGQL 164 (165)
T ss_dssp CCSSCEEEEEEEEC
T ss_pred CCCCcEEEEEeEEE
Confidence 99999999999997
No 7
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00 E-value=2.4e-51 Score=337.35 Aligned_cols=163 Identities=60% Similarity=1.000 Sum_probs=154.8
Q ss_pred CCCCeEEEEEEECCeeeeEEEEEEeCCCCchhHHhHHHHhhCCCCCCCCCCCCce-ecCCEEEEeecCCeEEeCCCCCCC
Q 021445 1 MARPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLH-YKGVRFHRVIKGFMIQGGDISAGD 79 (312)
Q Consensus 1 ~~~~~v~~d~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~~-Y~g~~~~rv~~~~~iq~G~~~~~~ 79 (312)
|.+|+||||+++++++.|+|+||||++.||++|+||++||++.++ | |+|+.||||+|+|+|||||+..++
T Consensus 8 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g---------~~Y~g~~FhRvi~~f~iQgGd~~~~~ 78 (172)
T 2cmt_A 8 RNLPRVFFDIRIGNGDAGRIVMELRSDIVPRTAENFRALCTGERG---------FGYHNCCFHRVIPQFMCQGGDFVKGD 78 (172)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS---------CSSTTCBEEEEETTTEEEECCTTTSS
T ss_pred CCCCEEEEEEEECCeecceEEEEEcCCCCCHHHHHHHHHhccCCC---------ceECCCEEEEEECCCEEEcCCccCCC
Confidence 569999999999999999999999999999999999999997432 6 999999999999999999998788
Q ss_pred CCCCCcccCCCCCCCcccccCCCcceEEeecCCCCCCCceEEEecCCCCCCCCCCceEEEEEeChHHHHHHhcccCCCCC
Q 021445 80 GTGGESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDND 159 (312)
Q Consensus 80 ~~~~~~~~~~~~~~e~~~~~~~~~G~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~G~~vl~~i~~~~~~~~~ 159 (312)
|+++.++||.+|++|++.++|.++|+||||+.+|++++|||||++.+.++||++|+|||+|++||+||++|+.++++. +
T Consensus 79 G~gg~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~G~dvv~~I~~~~~~~-~ 157 (172)
T 2cmt_A 79 GTGGKSIYGRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGSKS-G 157 (172)
T ss_dssp SSCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHGGGGCCTT-C
T ss_pred CCCCCccCCCcccccccCcccCCceEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCCC-C
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998864 8
Q ss_pred CcccceEEeeeeee
Q 021445 160 CPIADVTITDCGEI 173 (312)
Q Consensus 160 ~P~~~i~I~~~g~l 173 (312)
+|..+|+|.+||++
T Consensus 158 ~P~~~v~I~~~g~l 171 (172)
T 2cmt_A 158 KVKEPVIISRCGEL 171 (172)
T ss_dssp CCSSCEEEEEEEEE
T ss_pred CCCCCEEEEEeEeE
Confidence 99999999999998
No 8
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00 E-value=1.6e-51 Score=341.98 Aligned_cols=169 Identities=61% Similarity=0.986 Sum_probs=158.1
Q ss_pred CCCeEEEEEEECCeeeeEEEEEEeCCCCchhHHhHHHHhhCCCCCCCCCCCCceecCCEEEEeecCCeEEeCCCCCCCCC
Q 021445 2 ARPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKGVRFHRVIKGFMIQGGDISAGDGT 81 (312)
Q Consensus 2 ~~~~v~~d~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~~Y~g~~~~rv~~~~~iq~G~~~~~~~~ 81 (312)
.+|+|||||++++++.|+|+||||++.||+||+||++||++.++.+. .+++++|+|+.||||+|+|||||||+..++|+
T Consensus 18 ~~~~v~~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~-~~~~~~Y~g~~FhRVi~~f~iQgGd~~~~~G~ 96 (186)
T 2poy_A 18 GNPVVYFDISIGQTPAGRITMELFADKVPITAENFRALCTGEKGMGQ-SGKPLCYTGSFFHRIIPQFMIQGGDFTRGDGT 96 (186)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCT-TSSBSCCTTCBCCEEETTTEEEECCTTTSSSS
T ss_pred CCCEEEEEEeECCEecccEEEEEeCCCCcHHHHHHHHHhcccCCccc-cCccceECCCEEEEEeCCCEEEeCCCCCCCCC
Confidence 58999999999999999999999999999999999999997655543 46777899999999999999999999878899
Q ss_pred CCCcccCCCCCCCcccccCCCcceEEeecCCCCCCCceEEEecCCCCCCCCCCceEEEEEeChHHHHHHhcccCCCCCCc
Q 021445 82 GGESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDNDCP 161 (312)
Q Consensus 82 ~~~~~~~~~~~~e~~~~~~~~~G~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~G~~vl~~i~~~~~~~~~~P 161 (312)
++.++||.+|++|++.++|.++|+||||+.+|++++|||||++.+.++||++|+|||+|++||+||++|+.+++. +++|
T Consensus 97 gg~si~g~~f~dE~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~-~~~P 175 (186)
T 2poy_A 97 GGESIYGSKFRDENFVYTHDAPFLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGKVLEGMEVVKSIEKCGSQ-NGKP 175 (186)
T ss_dssp CCCCTTC-CBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCCT-TSCC
T ss_pred CCCccCCCcccCcccccccCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCeeEEEEEecCHHHHHHHHhCCCC-CCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999984 4899
Q ss_pred ccceEEeeeee
Q 021445 162 IADVTITDCGE 172 (312)
Q Consensus 162 ~~~i~I~~~g~ 172 (312)
..+|+|.+||+
T Consensus 176 ~~~v~I~~cG~ 186 (186)
T 2poy_A 176 TKSVCITASGV 186 (186)
T ss_dssp SSCEEEEEEEC
T ss_pred CCCEEEEeCCC
Confidence 99999999985
No 9
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00 E-value=2.8e-51 Score=335.54 Aligned_cols=162 Identities=57% Similarity=0.952 Sum_probs=155.4
Q ss_pred CCCeEEEEEEECCeeeeEEEEEEeCCCCchhHHhHHHHhhCCCCCCCCCCCCce-ecCCEEEEeecCCeEEeCCCCCCCC
Q 021445 2 ARPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLH-YKGVRFHRVIKGFMIQGGDISAGDG 80 (312)
Q Consensus 2 ~~~~v~~d~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~~-Y~g~~~~rv~~~~~iq~G~~~~~~~ 80 (312)
+||+|||||++++++.|+|+||||++.||+||+||++||++.++ | |+|+.||||+|+|+|||||+..+++
T Consensus 1 ~~p~vf~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~L~~g~~g---------~~Y~g~~fhRvi~~f~iQgGd~~~~~g 71 (164)
T 3pmp_A 1 AMANVFFNISINDKPEGRIVFKLYDEAVPKTAKNFRELATGQHG---------FGYKDSIFHRVIPQFMLQGGDFTRHNG 71 (164)
T ss_dssp CCCCEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS---------CSSTTCBEEEEETTTEEEECCTTTSSS
T ss_pred CCCEEEEEEEECCEEeeEEEEEEeCCCCcHHHHHHHHHhcccCC---------CcccCCEEEEEECCCeEEeCCCCCCCC
Confidence 68999999999999999999999999999999999999996543 6 9999999999999999999877889
Q ss_pred CCCCcccCCCCCCCcccccCCCcceEEeecCCCCCCCceEEEecCCCCCCCCCCceEEEEEeChHHHHHHhcccCCCCCC
Q 021445 81 TGGESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDNDC 160 (312)
Q Consensus 81 ~~~~~~~~~~~~~e~~~~~~~~~G~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~G~~vl~~i~~~~~~~~~~ 160 (312)
.++.++|+.+|++|+..++|.++|+|||++.+|++++|||||++++.++||++|+|||+|++||+||++|+.++++ +++
T Consensus 72 ~gg~si~g~~~~dE~~~l~h~~~G~lsma~~g~~t~~SQFfIt~~~~~~Ld~~~~vFG~Vv~G~~vv~~I~~~~~~-~~~ 150 (164)
T 3pmp_A 72 TGGKSIYGEKFADENFQVKHTKPGLLSMANAGANTNGSQFFITTVPTSWLDGKHVVFGEVIEGLDIVRKVEGKGSA-SGK 150 (164)
T ss_dssp SCCCBTTBSCBCCCCCCSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT-TCC
T ss_pred CCCcccCCccccccccccCcCCCcEEEEeeCCCCCcccEEEEECCCChhhCCCccEEEEEeCCHHHHHHHHhCCCC-CCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999987 489
Q ss_pred cccceEEeeeeee
Q 021445 161 PIADVTITDCGEI 173 (312)
Q Consensus 161 P~~~i~I~~~g~l 173 (312)
|..+|+|.+||+|
T Consensus 151 P~~~v~I~~cg~l 163 (164)
T 3pmp_A 151 TNATIKITDCGTV 163 (164)
T ss_dssp CSSCEEEEEEEEC
T ss_pred cccCEEEEeCeEE
Confidence 9999999999997
No 10
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00 E-value=1.7e-51 Score=340.17 Aligned_cols=169 Identities=58% Similarity=0.988 Sum_probs=159.2
Q ss_pred CCCeEEEEEEECCeeeeEEEEEEeCCCCchhHHhHHHHhhCCCCCCCCCCCCceecCCEEEEeecCCeEEeCCCCCCCCC
Q 021445 2 ARPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKGVRFHRVIKGFMIQGGDISAGDGT 81 (312)
Q Consensus 2 ~~~~v~~d~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~~Y~g~~~~rv~~~~~iq~G~~~~~~~~ 81 (312)
.||+||||+++++++.|+|+||||++.||+||+||++||+++.+. .+++++|+|+.||||+|+|+|||||+..++|+
T Consensus 9 ~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~---~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~ 85 (177)
T 1mzw_A 9 VNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRK---DGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGT 85 (177)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCEE---TTEECSSTTCBCCEEETTTEEEECCTTTSSSC
T ss_pred CCCEEEEEEEECCeeceeEEEEEcCCCCcHHHHHHHHHHhcccCC---cCccceECCCEEEEEECCCEEEcCCcccCCCC
Confidence 489999999999999999999999999999999999999987432 24445699999999999999999999878899
Q ss_pred CCCcccCCCCCCCcccccCCCcceEEeecCCCCCCCceEEEecCCCCCCCCCCceEEEEEeChHHHHHHhcccCCCCCCc
Q 021445 82 GGESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDNDCP 161 (312)
Q Consensus 82 ~~~~~~~~~~~~e~~~~~~~~~G~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~G~~vl~~i~~~~~~~~~~P 161 (312)
+++++||..|++|++.++|+++|+||||+.+|++++|||||++++.++||++|+|||+|++||+||++|+.++++.+++|
T Consensus 86 gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~t~~~~~P 165 (177)
T 1mzw_A 86 GVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKP 165 (177)
T ss_dssp CCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGCB
T ss_pred CCCccCCCcccCcccccccCCCCEEEEccCCCCCcceEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888999
Q ss_pred ccceEEeeeeee
Q 021445 162 IADVTITDCGEI 173 (312)
Q Consensus 162 ~~~i~I~~~g~l 173 (312)
..+|+|.+||+|
T Consensus 166 ~~~v~I~~cG~l 177 (177)
T 1mzw_A 166 KLPVVISQCGEM 177 (177)
T ss_dssp SSCEEEEEEEEC
T ss_pred CCCEEEEeceeC
Confidence 999999999986
No 11
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00 E-value=1.7e-51 Score=337.55 Aligned_cols=163 Identities=56% Similarity=0.907 Sum_probs=155.5
Q ss_pred CCCCeEEEEEEECCeeeeEEEEEEeCCCCchhHHhHHHHhhCCCCCCCCCCCCce-ecCCEEEEeecCCeEEeCCCCCCC
Q 021445 1 MARPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLH-YKGVRFHRVIKGFMIQGGDISAGD 79 (312)
Q Consensus 1 ~~~~~v~~d~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~~-Y~g~~~~rv~~~~~iq~G~~~~~~ 79 (312)
|.+|+||||+++++++.|+|+||||++.||+||+||++||++.++ | |+|+.||||+|+|+|||||+..++
T Consensus 9 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g---------~~Y~g~~FhRvi~~f~iQgGd~~~~~ 79 (172)
T 2haq_A 9 EVTAKVYFDVMIDSEPLGRITIGLFGKDAPLTTENFRQLCTGEHG---------FGYKDSIFHRVIQNFMIQGGDFTNFD 79 (172)
T ss_dssp CCCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS---------CCSTTCBCCEEETTTEEEECCTTTSS
T ss_pred CCCCeEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhccCCC---------cccCCCEEEEEECCCEEecCCccCCC
Confidence 568999999999999999999999999999999999999976533 6 999999999999999999987788
Q ss_pred CCCCCcccCCCCCCCcccccCCCcceEEeecCCCCCCCceEEEecCCCCCCCCCCceEEEEEeChHHHHHHhcccCCCCC
Q 021445 80 GTGGESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDND 159 (312)
Q Consensus 80 ~~~~~~~~~~~~~~e~~~~~~~~~G~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~G~~vl~~i~~~~~~~~~ 159 (312)
|++++++||.+|++|+..++|. +|+||||+.+|++++|||||++++.++||++|+|||+|++||+||++|+.++++.++
T Consensus 80 g~gg~si~g~~f~dE~~~l~h~-~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~ 158 (172)
T 2haq_A 80 GTGGKSIYGEKFADENLNVKHF-VGALSMANAGPNTNGSQFFITTAPTPWLDGRHVVFGKVLDGMDVVLRIEKTKTNSHD 158 (172)
T ss_dssp SSCCCCSSSSCBCCCCCCSCCC-TTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGG
T ss_pred CCCCccccCCcccCcCCCcccC-ceEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEeCCHHHHHHHHhCCcCCCC
Confidence 9999999999999999899998 999999999999999999999999999999999999999999999999999999888
Q ss_pred CcccceEEeeeeee
Q 021445 160 CPIADVTITDCGEI 173 (312)
Q Consensus 160 ~P~~~i~I~~~g~l 173 (312)
+|..+|+|.+||+|
T Consensus 159 ~P~~~v~I~~~g~l 172 (172)
T 2haq_A 159 RPVKPVKIVASGEL 172 (172)
T ss_dssp CBSSCEEEEEEEEC
T ss_pred cCCCCeEEEEeEEC
Confidence 99999999999985
No 12
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00 E-value=5.7e-51 Score=335.74 Aligned_cols=163 Identities=57% Similarity=0.962 Sum_probs=154.7
Q ss_pred CCCCeEEEEEEECCeeeeEEEEEEeCCCCchhHHhHHHHhhCCCCCCCCCCCCce-ecCCEEEEeecCCeEEeCCCCCCC
Q 021445 1 MARPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLH-YKGVRFHRVIKGFMIQGGDISAGD 79 (312)
Q Consensus 1 ~~~~~v~~d~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~~-Y~g~~~~rv~~~~~iq~G~~~~~~ 79 (312)
|.||+||||+++++++.|+|+||||.+.||++|+||++||++.++ | |+|+.||||+|+|+|||||+..++
T Consensus 9 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g---------~~Y~g~~FhRvi~~f~iQgGd~~~~~ 79 (173)
T 2r99_A 9 RSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKG---------FGFKGSSFHRIIPQFMCQGGDFTNHN 79 (173)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS---------CCSTTCBEEEEETTTEEEECCTTTSS
T ss_pred cCCCEEEEEEEECCccceeEEEEECCCCCcHHHHHHHHHhcccCC---------ceecCCEEEEeeCCCEEEeCCcCCCC
Confidence 569999999999999999999999999999999999999986533 5 999999999999999999998888
Q ss_pred CCCCCcccCCCCCCCcccccCCCcceEEeecCCCCCCCceEEEecCCCCCCCCCCceEEEEEeChHHHHHHhcccCCCCC
Q 021445 80 GTGGESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDND 159 (312)
Q Consensus 80 ~~~~~~~~~~~~~~e~~~~~~~~~G~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~G~~vl~~i~~~~~~~~~ 159 (312)
|+++.++||..|++|++.++|+++|+|||++.+|++++|||||++.+.++||++|+|||+|++||+||++|+.++++. +
T Consensus 80 g~gg~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~-~ 158 (173)
T 2r99_A 80 GTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKD-G 158 (173)
T ss_dssp SSCCCBTTBSCBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTT-C
T ss_pred CCCCCccCCCcccCcccCcccCCCcEEEEccCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCCC-C
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998865 8
Q ss_pred CcccceEEeeeeee
Q 021445 160 CPIADVTITDCGEI 173 (312)
Q Consensus 160 ~P~~~i~I~~~g~l 173 (312)
+|..+|+|.+||++
T Consensus 159 ~P~~~v~I~~cG~l 172 (173)
T 2r99_A 159 KPKQKVIIADCGEY 172 (173)
T ss_dssp CCSSCEEEEEEEEC
T ss_pred CCCCCeEEEEeeeE
Confidence 99999999999997
No 13
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00 E-value=3e-51 Score=336.79 Aligned_cols=169 Identities=59% Similarity=1.000 Sum_probs=157.2
Q ss_pred CCCeEEEEEEECCeeeeEEEEEEeCCCCchhHHhHHHHhhCCCCCCCCCCCCceecCCEEEEeecCCeEEeCCCCCCCCC
Q 021445 2 ARPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKGVRFHRVIKGFMIQGGDISAGDGT 81 (312)
Q Consensus 2 ~~~~v~~d~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~~Y~g~~~~rv~~~~~iq~G~~~~~~~~ 81 (312)
.||+|||||++++++.|+|+||||++.||+||+||++||++. +.+ ..+++++|+|+.||||+|+|||||||+..++|+
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~-g~g-~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~ 79 (170)
T 1qng_A 2 KRSKVFFDISIDNSNAGRIIFELFSDITPRTCENFRALCTGE-KIG-SRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGS 79 (170)
T ss_dssp CSCEEEEEEEESSSEEEEEEEEECTTTCHHHHHHHHHHHHTC-EEC-TTSSEECCTTCBCCEEETTTEEEECCTTTSSSS
T ss_pred CCCEEEEEEeECCEeceeEEEEEcCCCCCHHHHHHHHHhccC-CcC-ccCccceECCCEEEEEECCCEEEcCCccCCCCC
Confidence 489999999999999999999999999999999999999863 222 235555699999999999999999999878899
Q ss_pred CCCcccCCCCCCCcccccCCCcceEEeecCCCCCCCceEEEecCCCCCCCCCCceEEEEEeChHHHHHHhcccCCCCCCc
Q 021445 82 GGESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDNDCP 161 (312)
Q Consensus 82 ~~~~~~~~~~~~e~~~~~~~~~G~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~G~~vl~~i~~~~~~~~~~P 161 (312)
++.++||..|++|++.++|+++|+||||+.+|++++|||||++.+.++||++|+|||+|++||+||++|+.+++ .+++|
T Consensus 80 gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~t-~~~~P 158 (170)
T 1qng_A 80 GGESIYGRSFTDENFNMKHDQPGLLSMANAGPNTNSSQFFITLVPCPWLDGKHVVFGKVIEGMNVVREMEKEGA-KSGYV 158 (170)
T ss_dssp CCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCC-TTCCC
T ss_pred CCccccCCcccccccccccCCCCEEEEeecCCCCcccEEEEECCCCcccCCCeeEEEEEECCHHHHHHHHhCCC-CCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999 55899
Q ss_pred ccceEEeeeeee
Q 021445 162 IADVTITDCGEI 173 (312)
Q Consensus 162 ~~~i~I~~~g~l 173 (312)
..+|+|.+||++
T Consensus 159 ~~~v~I~~cG~l 170 (170)
T 1qng_A 159 KRSVVITDCGEL 170 (170)
T ss_dssp SSCEEEEEEEEC
T ss_pred CCCeEEEeceeC
Confidence 999999999986
No 14
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=2.2e-51 Score=342.03 Aligned_cols=169 Identities=57% Similarity=0.950 Sum_probs=159.6
Q ss_pred CCeEEEEEEECCeeeeEEEEEEeCCCCchhHHhHHHHhhCCCCCCCCCCCCce-ecCCEEEEeecCCeEEeCCCCCCCCC
Q 021445 3 RPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLH-YKGVRFHRVIKGFMIQGGDISAGDGT 81 (312)
Q Consensus 3 ~~~v~~d~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~~-Y~g~~~~rv~~~~~iq~G~~~~~~~~ 81 (312)
+|+|||||++++++.|+|+|+||.+.||+||+||++||++.++ | |+|+.||||+|+|||||||+..++|+
T Consensus 15 ~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g---------~~Y~g~~FhRvi~~f~iQgGd~~~~~g~ 85 (188)
T 3ich_A 15 TVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKG---------FGYKNSKFHRVIKDFMIQGGDFTRGDGT 85 (188)
T ss_dssp EEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS---------CSSTTCBCCEEETTTEEEECCTTTSSSS
T ss_pred CCeEEEEEEECCEeceeEEEEEcCCCCcHHHHHHHHHhcccCC---------ccccCCEEEEEECCCEEEcCCccCCCCC
Confidence 6899999999999999999999999999999999999986533 6 99999999999999999998778899
Q ss_pred CCCcccCCCCCCCcccccCCCcceEEeecCCCCCCCceEEEecCCCCCCCCCCceEEEEEeChHHHHHHhcccCCCCCCc
Q 021445 82 GGESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDNDCP 161 (312)
Q Consensus 82 ~~~~~~~~~~~~e~~~~~~~~~G~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~G~~vl~~i~~~~~~~~~~P 161 (312)
|+.++||..|++|+..++|+++|+|||++.+|++++|||||++++.++||++|+|||+|++||+||++|+.++++.+++|
T Consensus 86 gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~~~~P 165 (188)
T 3ich_A 86 GGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKP 165 (188)
T ss_dssp CCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCB
T ss_pred CCccccCCcccccccCcccCCCeEEEEccCCCCCcccEEEEECCCCcccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCeE
Confidence 99999999999999899999999999999999999999999999999999999999999999999999999999988899
Q ss_pred ccceEEeeeeee--CCCCCCC
Q 021445 162 IADVTITDCGEI--PEGADDG 180 (312)
Q Consensus 162 ~~~i~I~~~g~l--~~~~~~~ 180 (312)
..+|+|.+|+++ .+||+++
T Consensus 166 ~~~v~I~~~~~l~~~~Pf~~~ 186 (188)
T 3ich_A 166 LKDVIIADCGKIEVEKPFAIA 186 (188)
T ss_dssp SSCEEEEEEEEEEEEEEEECC
T ss_pred CCCEEEEEeEEEecCCCCCCC
Confidence 999999999998 5566654
No 15
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00 E-value=1.7e-50 Score=335.90 Aligned_cols=164 Identities=59% Similarity=0.982 Sum_probs=155.7
Q ss_pred CCCCeEEEEEEECCeeeeEEEEEEeCCCCchhHHhHHHHhhCCCCCCCCCCCCce-ecCCEEEEeecCCeEEeCCCCCCC
Q 021445 1 MARPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLH-YKGVRFHRVIKGFMIQGGDISAGD 79 (312)
Q Consensus 1 ~~~~~v~~d~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~~-Y~g~~~~rv~~~~~iq~G~~~~~~ 79 (312)
|.||+||||+++++++.|+|+|+||++.||++|+||++||+++.+ + |+|+.||||+|+|+|||||+..++
T Consensus 20 ~~~p~v~~di~i~~~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g---------~~Y~g~~FhRvi~~f~iQgGd~~~~~ 90 (184)
T 3rdd_A 20 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKG---------FGYKGSCFHRIIPGFMCQGGDFTRHN 90 (184)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTS---------CSSTTCBCCEEETTTEEEECCTTTSS
T ss_pred CCCCEEEEEEeECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCcC---------cccCCCEEEEccCCcEEEeCCCCCCC
Confidence 579999999999999999999999999999999999999998743 4 999999999999999999988888
Q ss_pred CCCCCcccCCCCCCCcccccCCCcceEEeecCCCCCCCceEEEecCCCCCCCCCCceEEEEEeChHHHHHHhcccCCCCC
Q 021445 80 GTGGESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDND 159 (312)
Q Consensus 80 ~~~~~~~~~~~~~~e~~~~~~~~~G~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~G~~vl~~i~~~~~~~~~ 159 (312)
|.++.++++..|++|++.++|.++|+|||++.+|++++|||||++++.++||++|+|||+|++||+||++|+.++++ ++
T Consensus 91 g~gg~si~g~~~~de~~~l~h~~~G~lsmA~~gp~s~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~-~g 169 (184)
T 3rdd_A 91 GTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSR-NG 169 (184)
T ss_dssp SSCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT-TS
T ss_pred CCCCcccCCCcccCcccccccCCCcEEEEEeCCCCCcccEEEEEeCCchhhCCCceEEEEEecCHHHHHHHHhcCCC-CC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999875 58
Q ss_pred CcccceEEeeeeeeC
Q 021445 160 CPIADVTITDCGEIP 174 (312)
Q Consensus 160 ~P~~~i~I~~~g~l~ 174 (312)
+|..+|+|.+||+|.
T Consensus 170 ~P~~~v~I~~cG~l~ 184 (184)
T 3rdd_A 170 KTSKKITIADCGQLE 184 (184)
T ss_dssp CCSSCEEEEEEEECC
T ss_pred CCcCCeEEEeCeEEC
Confidence 999999999999983
No 16
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00 E-value=4.9e-50 Score=335.22 Aligned_cols=164 Identities=52% Similarity=0.886 Sum_probs=155.9
Q ss_pred CCCCeEEEEEEECCeeeeEEEEEEeCCCCchhHHhHHHHhhCCCCCCCCCCCCce-ecCCEEEEeecCCeEEeCCCCCCC
Q 021445 1 MARPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLH-YKGVRFHRVIKGFMIQGGDISAGD 79 (312)
Q Consensus 1 ~~~~~v~~d~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~~-Y~g~~~~rv~~~~~iq~G~~~~~~ 79 (312)
|+||+|||||++++++.|+|+||||++.||++|+||++||+++++ | |+|+.||||+|+|+|||||+..++
T Consensus 25 ~~~p~v~~di~i~~t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~g---------~~Y~g~~FhRvi~~f~iQgGd~~~~~ 95 (193)
T 3k2c_A 25 EASGNVYFDVYANEESLGRIVMKLEDDIVPKTAKNFRTLCERPKG---------EGYKGSTFHRIIPGFMVQGGDYTAHN 95 (193)
T ss_dssp -CTTCEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHSCTT---------SSSTTCBEEEEETTTEEEECCTTTSS
T ss_pred cCCCEEEEEEeECCEEeeEEEEEEcCCCChHHHHHHHHHhccccC---------CcccCCEEEEEeCCCEEEeCCCCCCC
Confidence 569999999999999999999999999999999999999997643 5 999999999999999999988888
Q ss_pred CCCCCcccCCCCCCCcccccCCCcceEEeecCCCCCCCceEEEecCCCCCCCCCCceEEEEEeChHHHHHHhcccCCCCC
Q 021445 80 GTGGESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDND 159 (312)
Q Consensus 80 ~~~~~~~~~~~~~~e~~~~~~~~~G~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~G~~vl~~i~~~~~~~~~ 159 (312)
+.++.++++..|++|++.++|+++|+|+|++.+|++++|||||++++.++||++|+|||+|++||+||++|+.++++. +
T Consensus 96 g~gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~t~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~-g 174 (193)
T 3k2c_A 96 GTGGRSIYGEKFPDENFELKHTKEGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDVVHKIAKYGSES-G 174 (193)
T ss_dssp SSCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTT-C
T ss_pred CcCCcccCCCcccccccccccCCCcEEEEEeCCCCCCccEEEEECCCCcccCCCccEEEEEeCCHHHHHHHHhcCCCC-C
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999885 7
Q ss_pred Ccc--cceEEeeeeeeC
Q 021445 160 CPI--ADVTITDCGEIP 174 (312)
Q Consensus 160 ~P~--~~i~I~~~g~l~ 174 (312)
+|. .+|+|.+||+|.
T Consensus 175 ~P~~~~~v~I~~cG~l~ 191 (193)
T 3k2c_A 175 QVKKGYRIEIRDCGVLG 191 (193)
T ss_dssp CCCTTCCEEEEEEEECC
T ss_pred cCccCccEEEEEceEeC
Confidence 999 999999999985
No 17
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=2.6e-50 Score=343.34 Aligned_cols=169 Identities=49% Similarity=0.929 Sum_probs=160.3
Q ss_pred CCCeEEEEEEECCeeeeEEEEEEeCCCCchhHHhHHHHhhCCCCCCCCCCCCceecCCEEEEeecCCeEEeCCCCCCCCC
Q 021445 2 ARPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKGVRFHRVIKGFMIQGGDISAGDGT 81 (312)
Q Consensus 2 ~~~~v~~d~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~~Y~g~~~~rv~~~~~iq~G~~~~~~~~ 81 (312)
.||+|||||++++++.|+|+||||.+.||+||+||++||+++++.+ ++++||+|+.||||+|+|+|||||+..++|+
T Consensus 58 ~~~~V~~disi~~t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~---g~~~~Y~gt~FHRVi~~FmiQgGD~~~g~G~ 134 (229)
T 1z81_A 58 SNPVVFMDINLGNNFLGKFKFELFQNIVPKTSENFRQFCTGEYKVN---NLPVGYKNTIFHRVIKEFMIQGGDFINHNGS 134 (229)
T ss_dssp TCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSS---SSBCSSTTEECCEEETTTEEEECCTTTSSSC
T ss_pred CCcEEEEEEeECCeecccEEEEEcCCCCCHHHHHHHHHhhCCCCCc---CCCceECCCEEEEEeCCCEEEcCCCcCCCCC
Confidence 3899999999999999999999999999999999999999875443 5666899999999999999999999878899
Q ss_pred CCCcccCCCCCCCcccccCCCcceEEeecCCCCCCCceEEEecCCCCCCCCCCceEEEEE--eChHHHHHHhcccCCCC-
Q 021445 82 GGESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVI--KGMGVVRSIEHVMTGDN- 158 (312)
Q Consensus 82 ~~~~~~~~~~~~e~~~~~~~~~G~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~--~G~~vl~~i~~~~~~~~- 158 (312)
++.++||..|++|++.++|+++|+||||+.+|++++||||||+.+.++||++|+|||+|+ +||+||++|+.++++.+
T Consensus 135 Gg~siyg~~f~dE~~~l~h~~~G~LsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~eGmdVv~~I~~~~t~~~~ 214 (229)
T 1z81_A 135 GSLSIYGEKFDDENFDIKHDKEGLLSMANSGPNTNGCQFFITTKKCEWLDGKNVVFGRIIDNDSLLLLKKIENVSVTPYI 214 (229)
T ss_dssp CCCBTTBSCCCCCCCCSCCCSTTEEEECCSSSSCCCSCEEEESSCCGGGBTTBCEEEEECSHHHHHHHHHHHHSCBCTTT
T ss_pred CCCccCCCcccccccccccCCCcEEEeccCCCCCcccEEEEECCCCcccCCCeeEEEEEEecCcHHHHHHHHhCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999 99999999999999887
Q ss_pred CCcccceEEeeeeee
Q 021445 159 DCPIADVTITDCGEI 173 (312)
Q Consensus 159 ~~P~~~i~I~~~g~l 173 (312)
++|..+|+|.+||++
T Consensus 215 ~~P~~~V~I~~cG~l 229 (229)
T 1z81_A 215 YKPKIPINVVECGEL 229 (229)
T ss_dssp CCBSSCEEEEEEEEC
T ss_pred CCCCCCeEEEeCeeC
Confidence 899999999999986
No 18
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=5.1e-50 Score=334.15 Aligned_cols=164 Identities=59% Similarity=0.998 Sum_probs=157.2
Q ss_pred CCeEEEEEEECCeeeeEEEEEEeCCCCchhHHhHHHHhhCCCCCCCCCCCCceecCCEEEEeecCCeEEeCCCCCCCCCC
Q 021445 3 RPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKGVRFHRVIKGFMIQGGDISAGDGTG 82 (312)
Q Consensus 3 ~~~v~~d~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~~Y~g~~~~rv~~~~~iq~G~~~~~~~~~ 82 (312)
+|+|||||++++++.|+|+||||++.||+||+||++||++.++. +|+|+.||||+|+|+|||||+..++|.+
T Consensus 12 ~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~--------~Y~g~~FhRvi~~f~iQgGd~~~~~g~g 83 (185)
T 4fru_A 12 TVKVYFDLRIGDEDIGRVVIGLFGKTVPKTVDNFVALATGEKGF--------GYKDSKFHRVIKDFMIQGGDFTRGDGTG 83 (185)
T ss_dssp EEEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSC--------CSTTCBCCEEETTTEEEECCTTTSSSSC
T ss_pred CcEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHHhcCCCC--------eEcCCEEEEeeCCCeEEECCCCCCCCCC
Confidence 68999999999999999999999999999999999999985332 5999999999999999999998888999
Q ss_pred CCcccCCCCCCCcccccCCCcceEEeecCCCCCCCceEEEecCCCCCCCCCCceEEEEEeChHHHHHHhcccCCCCCCcc
Q 021445 83 GESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDNDCPI 162 (312)
Q Consensus 83 ~~~~~~~~~~~e~~~~~~~~~G~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~G~~vl~~i~~~~~~~~~~P~ 162 (312)
+.++++..|++|+..++|+++|+|||++.+|++++|||||++++.++||++|+|||+|++||+||++|+.++++.+++|.
T Consensus 84 g~si~g~~f~de~~~~~h~~~G~lsma~~gp~t~~SQFfI~~~~~~~Ld~~~~vFG~Vv~G~dvv~~I~~~~t~~~~~P~ 163 (185)
T 4fru_A 84 GKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVETTKTDGRDKPL 163 (185)
T ss_dssp CCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBS
T ss_pred CccccCCccCccccccCcCCCeEEEEeeCCCCCcceEEEEEeCCCcccCCCccEEEEEeCCHHHHHHHHhCCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred cceEEeeeeeeC
Q 021445 163 ADVTITDCGEIP 174 (312)
Q Consensus 163 ~~i~I~~~g~l~ 174 (312)
.+|+|.+||++.
T Consensus 164 ~~v~I~~~g~l~ 175 (185)
T 4fru_A 164 KDVTIADCGKIE 175 (185)
T ss_dssp SCEEEEEEEEEE
T ss_pred CCEEEEEceEEe
Confidence 999999999985
No 19
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=100.00 E-value=9.2e-49 Score=336.34 Aligned_cols=178 Identities=28% Similarity=0.520 Sum_probs=155.0
Q ss_pred CCCeEEEEEEECCeeeeEEEEEEeCCCCchhHHhHHHHhhCCCCCCCC---------CCCCce-ecCCEEEEeecCCeEE
Q 021445 2 ARPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPN---------TGVPLH-YKGVRFHRVIKGFMIQ 71 (312)
Q Consensus 2 ~~~~v~~d~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~---------~~~~~~-Y~g~~~~rv~~~~~iq 71 (312)
.||+||||+++++++.|+|+||||.+.||+||+||++||++.+.+..+ .|++ | |+|+.||||+|+||||
T Consensus 13 ~~p~v~~di~i~~t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~~-~~Y~gt~FHRVi~~FmiQ 91 (234)
T 2ose_A 13 KNPRVYMDIVLNNEIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHIN-RTYEGCKFHNVLHNNYIV 91 (234)
T ss_dssp SSCEEEEEEEETTEEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------C-CCSTTCBCCEEETTTEEE
T ss_pred CCCEEEEEEEECCcccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCCc-eEECCcEEEEEECCCEEE
Confidence 489999999999999999999999999999999999999986332111 1223 5 9999999999999999
Q ss_pred eCCCCCCCCCCCCcccCCC-----CCCCcccccCCCcceEEeec----CCCCCCCceEEEecCC------CCCCCCCCce
Q 021445 72 GGDISAGDGTGGESIYGLK-----FEDENFELKHERKGMLSMAN----AGPNTNGSQFFITTTR------TSHLDGKHVV 136 (312)
Q Consensus 72 ~G~~~~~~~~~~~~~~~~~-----~~~e~~~~~~~~~G~l~~~~----~~~~~~~sqF~I~~~~------~~~ld~~~~v 136 (312)
|||+..++|+|++++||.. |+ ++.++|.++|+||||+ .||++++|||||++++ .++||++|+|
T Consensus 92 gGd~~~g~G~Gg~siyg~~~~p~~f~--~~~l~h~~~G~lsMAn~~~~~gpntngSQFFIt~~~~~~~~g~p~LDg~~tV 169 (234)
T 2ose_A 92 SGDIYNSNGSSAGTVYCDEPIPPVFG--DYFYPHESKGLLSLVPYTDESGNRYYDSTFMITLDDIRPSNVLDELDRDQVV 169 (234)
T ss_dssp ECCCC----CCCCCTTTTCCBCCCCC--SCCCCSCSTTEEEECCEECTTSCEEBCSCEEEESSCCCTTSSGGGSCTTSEE
T ss_pred cCCccCCCCCCCccccCCccCccccc--CcCccCCCCCEEEEecccccCCCCCccceEEEEecCccccCCCcccCCCeeE
Confidence 9998778899999999987 66 4589999999999999 8999999999999999 8999999999
Q ss_pred EEEEEeChHHHHHHhcccCCCCCCcccceEEeeeeeeCCCCCCCCC
Q 021445 137 FGRVIKGMGVVRSIEHVMTGDNDCPIADVTITDCGEIPEGADDGIS 182 (312)
Q Consensus 137 fG~V~~G~~vl~~i~~~~~~~~~~P~~~i~I~~~g~l~~~~~~~~~ 182 (312)
||+|++||+||++|+.++++.+++|..+|+|.+|+++.++++++..
T Consensus 170 FG~Vv~GmdVv~~I~~~~t~~~~~P~~~V~I~~~~~l~~p~~~~~k 215 (234)
T 2ose_A 170 IGQVYGGLDVLDKINSMIKPYAGRKYPTFSIGKCGAYLDSSQAQRK 215 (234)
T ss_dssp EEEEEECHHHHHHHHHHTCCCTTCCCCCEEEEEEEECCCHHHHCC-
T ss_pred EEEEeCCHHHHHHHHhCCcCCCCCccCCEEEEEEEEecCCcccccc
Confidence 9999999999999999999988999999999999999887766433
No 20
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=100.00 E-value=9.3e-49 Score=322.26 Aligned_cols=160 Identities=54% Similarity=0.929 Sum_probs=121.9
Q ss_pred eEEEEEEEC--Ceee---eEEEEEEeCCCCchhHHhHHHHhhCCCCCCCCCCCCce-ecCCEEEEeecCCeEEeCCCCCC
Q 021445 5 RCFLDISIG--VELE---GRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLH-YKGVRFHRVIKGFMIQGGDISAG 78 (312)
Q Consensus 5 ~v~~d~~~~--~~~~---G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~~-Y~g~~~~rv~~~~~iq~G~~~~~ 78 (312)
+|||||+++ +... |+|+||||++.||++|+||++||++.++ + |+|+.||||+|+|+|||||+..+
T Consensus 4 ~vf~di~i~~~~~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g---------~~Y~g~~fhRvi~~f~iQgGd~~~~ 74 (172)
T 2c3b_A 4 QVFFDVEYAPVGTAETKVGRIVFNLFDKDVPKTAKNFRELCKRPAG---------EGYRESTFHRIIPNFMIQGGDFTRG 74 (172)
T ss_dssp CEEEEEEECCTTCSCCEEEEEEEEECTTTSHHHHHHHHHHHHSCTT---------TSSTTCBCCEEETTTEEEECC----
T ss_pred EEEEEEEeCCCCceecccccEEEEEcCCCCcHHHHHHHHHhccCCC---------cccCCCEEEEEeCCCEEEeCCcCCC
Confidence 899999999 7655 9999999999999999999999997643 5 99999999999999999997778
Q ss_pred CCCCCCcccCCCCCCCcccccCCCcceEEeecCCCCCCCceEEEecCCCCCCCCCCceEEEEEe--ChHHHHHHhcccCC
Q 021445 79 DGTGGESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIK--GMGVVRSIEHVMTG 156 (312)
Q Consensus 79 ~~~~~~~~~~~~~~~e~~~~~~~~~G~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~--G~~vl~~i~~~~~~ 156 (312)
+|++++++||.+|++|+..++|+++|+||||+.+|++++|||||++.+.++||++|+|||+|++ ||+||++|++++++
T Consensus 75 ~g~gg~si~g~~f~dE~~~~~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~~~G~dvv~~I~~~~t~ 154 (172)
T 2c3b_A 75 NGTGGRSIYGDKFADENFSRKHDKKGILSMANAGPNTNGSQFFITTAVTSWLDGKHVVFGEVADEKSYSVVKEIEALGSS 154 (172)
T ss_dssp ------------------CHHHHHTCEEEEC---------CEEEECSCCTTCCSCCEEEEEECSHHHHHHHHHHHTTCCT
T ss_pred CCCCCcccCCCcccCcccccccCCCeEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEecCCHHHHHHHHhCCCC
Confidence 8999999999999999989999999999999999999999999999999999999999999999 99999999999998
Q ss_pred CCC-CcccceEEeeeeee
Q 021445 157 DND-CPIADVTITDCGEI 173 (312)
Q Consensus 157 ~~~-~P~~~i~I~~~g~l 173 (312)
.++ +|..+|+|.+||+|
T Consensus 155 ~~~~~P~~~v~I~~cG~l 172 (172)
T 2c3b_A 155 SGSVRSNTRPKIVNCGEL 172 (172)
T ss_dssp TSCCCSSSCCEEEEEEEC
T ss_pred CCCccCCCCeEEEeCeeC
Confidence 754 99999999999985
No 21
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00 E-value=2.5e-47 Score=316.78 Aligned_cols=154 Identities=44% Similarity=0.726 Sum_probs=144.1
Q ss_pred eeeeEEEEEEeCCCCchhHHhHHHHhhCCCCCCCCCCCCceecCCEEEEeecCCeEEeCCCCCCCCCCCCcccCCCCCCC
Q 021445 15 ELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKGVRFHRVIKGFMIQGGDISAGDGTGGESIYGLKFEDE 94 (312)
Q Consensus 15 ~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~~Y~g~~~~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e 94 (312)
++.|+|+||||++.||++|+||++||+.+ ||+|+.||||+|+|+|||||+. ++|.|+.++||.+|++|
T Consensus 23 t~~G~i~ieL~~~~aP~t~~NF~~L~~~g-----------~Y~g~~FhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE 90 (185)
T 2poe_A 23 TNYGDLKFELFCSQCPKACKNFLALSASG-----------YYKNTIFHKNIKGFIIQGGDPT-GTGKGGESIYGRYFDDE 90 (185)
T ss_dssp ETTEEEEEEECTTTCHHHHHHHHHHHHTT-----------TTTTEEEEEECTTSEEEEEETT-SSSSCCCBTTBSCBCCC
T ss_pred ecCccEEEEEeCCCCcHHHHHHHHHhccC-----------CCCCCEEEEEECCCEEEcCCCC-CCCCCCCccCCCccccc
Confidence 55899999999999999999999999987 8999999999999999999987 77888999999999999
Q ss_pred c-ccccCCCcceEEeecCC----CCCCCceEEEecCCCCCCCCCCceEEEEEeChHHHHHHhcccCCCCCCcccceEEee
Q 021445 95 N-FELKHERKGMLSMANAG----PNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDNDCPIADVTITD 169 (312)
Q Consensus 95 ~-~~~~~~~~G~l~~~~~~----~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~G~~vl~~i~~~~~~~~~~P~~~i~I~~ 169 (312)
+ ..++|+++|+||||+.+ |++++|||||++++.++||++|+|||+|++||+||++|+.++++.+++|..+|+|.+
T Consensus 91 ~~~~l~h~~~G~lsmA~~g~~~~p~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~v~I~~ 170 (185)
T 2poe_A 91 IYPELKYDRRGILSMASKGASKKPNTNGSQFFITYSSLPQLNGEYVIFGKLIDGFETLNTLENCPSDKSHKPIDEIIIKD 170 (185)
T ss_dssp CCTTSCCCSTTEEEECCSCC-CCCSCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTSCBSSCCEEEE
T ss_pred ccCCCccCCCeEEEEecCCCCCCCCCccceEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCcCCCeEEEE
Confidence 8 68999999999999999 999999999999999999999999999999999999999999998899999999999
Q ss_pred eeeeCCCCCCC
Q 021445 170 CGEIPEGADDG 180 (312)
Q Consensus 170 ~g~l~~~~~~~ 180 (312)
|+++.+||+++
T Consensus 171 ~~i~~dPf~d~ 181 (185)
T 2poe_A 171 IVIHSNPIADQ 181 (185)
T ss_dssp EEEECCC----
T ss_pred EEEECCCCCCc
Confidence 99999999875
No 22
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00 E-value=4.6e-47 Score=309.43 Aligned_cols=153 Identities=48% Similarity=0.764 Sum_probs=145.1
Q ss_pred eeeeEEEEEEeCCCCchhHHhHHHHhhCCCCCCCCCCCCceecCCEEEEeecCCeEEeCCCCCCCCCCCCcccCCCCCCC
Q 021445 15 ELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKGVRFHRVIKGFMIQGGDISAGDGTGGESIYGLKFEDE 94 (312)
Q Consensus 15 ~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~~Y~g~~~~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e 94 (312)
++.|+|+|+||++.||++|+||++||+++ ||+|+.||||+|+|+|||||+. ++|.++.++||.+|++|
T Consensus 7 T~~G~i~ieL~~~~aP~t~~NF~~L~~~g-----------~Y~g~~fhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE 74 (161)
T 2ok3_A 7 TDVGDIKIEVFCERTPKTCENFLALCASN-----------YYNGCIFHRNIKGFMVQTGDPT-GTGRGGNSIWGKKFEDE 74 (161)
T ss_dssp ETTEEEEEEECTTTCHHHHHHHHHHHHTT-----------TTTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSSCBCCC
T ss_pred eCCccEEEEEcCCCCcHHHHHHHHHhhhc-----------ccCCCEEEEEECCCEEecCCCC-CCCCCCCcccCCccccc
Confidence 45899999999999999999999999987 8999999999999999999987 67888999999999999
Q ss_pred cc-cccCCCcceEEeecCCCCCCCceEEEecCCCCCCCCCCceEEEEEeChHHHHHHhcccCCCC-CCcccceEEeeeee
Q 021445 95 NF-ELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDN-DCPIADVTITDCGE 172 (312)
Q Consensus 95 ~~-~~~~~~~G~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~G~~vl~~i~~~~~~~~-~~P~~~i~I~~~g~ 172 (312)
.. .++|+++|+|||++.+|++++|||||++++.++||++|+|||+|++||+||++|++++++.+ ++|..+|+|.+|.+
T Consensus 75 ~~~~l~h~~~G~lsma~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~P~~~v~I~~~~i 154 (161)
T 2ok3_A 75 YSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITI 154 (161)
T ss_dssp CCTTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTTCCBSSCCBEEEEEE
T ss_pred cCcCcCcCCCeEEEEecCCCCCcceEEEEEcCCCCccCCCEeEEEEEeCCHHHHHHHHhCCccCCCCCcCCCeEEEEEEE
Confidence 85 78999999999999999999999999999999999999999999999999999999999887 89999999999999
Q ss_pred eCCCCCC
Q 021445 173 IPEGADD 179 (312)
Q Consensus 173 l~~~~~~ 179 (312)
+.+||++
T Consensus 155 ~~~Pf~d 161 (161)
T 2ok3_A 155 HANPFAQ 161 (161)
T ss_dssp ECCSCC-
T ss_pred ecCCCCC
Confidence 9888864
No 23
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=1.1e-46 Score=314.66 Aligned_cols=154 Identities=44% Similarity=0.739 Sum_probs=145.5
Q ss_pred eeeeEEEEEEeCCCCchhHHhHHHHhhCCCCCCCCCCCCceecCCEEEEeecCCeEEeCCCCCCCCCCCCcccCCCCCCC
Q 021445 15 ELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKGVRFHRVIKGFMIQGGDISAGDGTGGESIYGLKFEDE 94 (312)
Q Consensus 15 ~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~~Y~g~~~~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e 94 (312)
++.|+|+|+||++.||++|+||++||+.+ ||+|+.||||+|+|+|||||+. ++|.|+.++||.+|++|
T Consensus 26 T~~G~I~ieL~~~~aP~tv~NF~~L~~~g-----------~Ydg~~FhRVi~~f~iQgGd~~-~~g~Gg~si~g~~f~dE 93 (197)
T 1zkc_A 26 TNKGDLNLELHCDLTPKTCENFIRLCKKH-----------YYDGTIFHRSIRNFVIQGGDPT-GTGTGGESYWGKPFKDE 93 (197)
T ss_dssp ETTEEEEEEECTTTSHHHHHHHHHHHHTT-----------TTTTEEEEEEETTTEEEECCTT-SSSSCCCBTTBSCBCCC
T ss_pred eCCccEEEEEcCCCCcHHHHHHHHHHhcC-----------CCCCCEEEEEeCCCEEEcCCCC-CCCCCCCccCCCccccc
Confidence 34899999999999999999999999987 8999999999999999999986 67889999999999999
Q ss_pred c-ccccCCCcceEEeecCCCCCCCceEEEecCCCCCCCCCCceEEEEEeChHHHHHHhcccCCCC-CCcccceEEeeeee
Q 021445 95 N-FELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDN-DCPIADVTITDCGE 172 (312)
Q Consensus 95 ~-~~~~~~~~G~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~G~~vl~~i~~~~~~~~-~~P~~~i~I~~~g~ 172 (312)
. ..++|+++|+|||++.+|++++|||||++++.++||++|+|||+|++||+||++|+.++++.+ ++|..+|+|.+|++
T Consensus 94 ~~~~l~h~~~G~lsMAn~gp~sngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~i~I~~~~v 173 (197)
T 1zkc_A 94 FRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDPKTDRPKEEIRIDATTV 173 (197)
T ss_dssp CCTTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTTCCBSSCCEEEEEEE
T ss_pred cCcCcCCCCceEEEEecCCCCCcccEEEEEcCCCCccCCCccEEEEEEcCHHHHHHHHcCCCCCCCCCcCCCeEEEEEEE
Confidence 4 689999999999999999999999999999999999999999999999999999999999887 89999999999999
Q ss_pred eCCCCCCC
Q 021445 173 IPEGADDG 180 (312)
Q Consensus 173 l~~~~~~~ 180 (312)
+.+||+++
T Consensus 174 ~~dPf~d~ 181 (197)
T 1zkc_A 174 FVDPYEEA 181 (197)
T ss_dssp EECTTHHH
T ss_pred EcCCcccH
Confidence 98887764
No 24
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00 E-value=1.4e-46 Score=307.57 Aligned_cols=155 Identities=50% Similarity=0.846 Sum_probs=147.4
Q ss_pred CCCeEEEEEEECCeeeeEEEEEEeCCCCchhHHhHHHHhhCCCCCCCCCCCCceecCCEEEEeecCCeEEeCCCCCCCCC
Q 021445 2 ARPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKGVRFHRVIKGFMIQGGDISAGDGT 81 (312)
Q Consensus 2 ~~~~v~~d~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~~Y~g~~~~rv~~~~~iq~G~~~~~~~~ 81 (312)
.++.|.|+++ .|+|+||||++.||++|+||++||+.+ ||+|+.||||+|+|+|||||+. ++|.
T Consensus 10 ~~~~v~l~t~-----~G~i~ieL~~~~aP~t~~NF~~L~~~g-----------~Y~g~~fhRvi~~f~iQgGd~~-~~g~ 72 (166)
T 2x7k_A 10 QPPNVYLETS-----MGIIVLELYWKHAPKTCKNFAELARRG-----------YYNGTKFHRIIKDFMIQGGDPT-GTGR 72 (166)
T ss_dssp CCSEEEEEET-----TEEEEEEECTTTCHHHHHHHHHHHHHT-----------TTTTEECCEEETTTEEEECCTT-SSSS
T ss_pred CCCEEEEEeC-----CCcEEEEEccCCCCHHHHHHHHHHhcC-----------CCCCCEEEEEECCCEEEcCCCC-CCCC
Confidence 4788999887 799999999999999999999999987 8999999999999999999986 6788
Q ss_pred CCCcccCCCCCCCcc-cccCCCcceEEeecCCCCCCCceEEEecCCCCCCCCCCceEEEEEeChHHHHHHhcccCCCCCC
Q 021445 82 GGESIYGLKFEDENF-ELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDNDC 160 (312)
Q Consensus 82 ~~~~~~~~~~~~e~~-~~~~~~~G~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~G~~vl~~i~~~~~~~~~~ 160 (312)
++.++|+..|++|+. .++|.++|+|||++.+|++++|||||++++.++||++|+|||+|++||+||++|+.++++.+++
T Consensus 73 gg~si~g~~~~dE~~~~l~h~~~G~lsmAn~gp~s~gSQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~ 152 (166)
T 2x7k_A 73 GGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDR 152 (166)
T ss_dssp CCCCTTSSCBCCCCCTTSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTSCBCTTSC
T ss_pred CCCccCCCccccccccccCCCCCeEEEEeeCCCCCccceEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCC
Confidence 899999999999984 8999999999999999999999999999999999999999999999999999999999998899
Q ss_pred cccceEEeeeeee
Q 021445 161 PIADVTITDCGEI 173 (312)
Q Consensus 161 P~~~i~I~~~g~l 173 (312)
|..+|+|.+|.++
T Consensus 153 P~~~i~I~~~~i~ 165 (166)
T 2x7k_A 153 PVDDVKIIKAYPS 165 (166)
T ss_dssp BSSCCEEEEEEEC
T ss_pred cCCCeEEEEEEEe
Confidence 9999999999986
No 25
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=1.2e-46 Score=314.43 Aligned_cols=157 Identities=47% Similarity=0.697 Sum_probs=146.0
Q ss_pred CCeEEEEEEECCeeeeEEEEEEeCCCCchhHHhHHHHhhCCCCCCCCCCCCceecCCEEEEeecCCeEEeCCCCCCCCCC
Q 021445 3 RPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKGVRFHRVIKGFMIQGGDISAGDGTG 82 (312)
Q Consensus 3 ~~~v~~d~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~~Y~g~~~~rv~~~~~iq~G~~~~~~~~~ 82 (312)
++.|.|+++ .|+|+|+||++.||++|+||++||+.+ ||+|+.||||+|+|+|||||+. ++|.|
T Consensus 38 ~~~V~l~T~-----~G~I~ieL~~~~aP~tv~NF~~L~~~g-----------~Y~g~~FhRVi~~f~iQgGd~~-~~g~g 100 (196)
T 2b71_A 38 RGYITIYTN-----LGDFEVELYWYHSPKTCLNFYTLCEMG-----------FYDNTIFHRVIPNFVIQGGDPT-GTGKG 100 (196)
T ss_dssp SCEEEEEET-----TEEEEEEECTTTSHHHHHHHHHHHHTT-----------TTTTEEEEEEETTTEEEEEETT-SSSSC
T ss_pred CcEEEEEeC-----CCCEEEEEeCCCCcHHHHHHHHHhhcC-----------CcCCCEEEEEeCCcEEEcCCCC-CCCCC
Confidence 678888876 899999999999999999999999987 8999999999999999999987 77889
Q ss_pred CCcccCCCCCCCc-ccccCCCcceEEeecCCCCCCCceEEEecCCCCCCCCCCceEEEEEeChHHHHHHhcccCCCCCCc
Q 021445 83 GESIYGLKFEDEN-FELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDNDCP 161 (312)
Q Consensus 83 ~~~~~~~~~~~e~-~~~~~~~~G~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~G~~vl~~i~~~~~~~~~~P 161 (312)
++++||.+|++|. ..++|+++|+|||++.+|++++|||||++++.++||++|+|||+|++||+||++|+.++++.+++|
T Consensus 101 g~si~g~~~~dE~~~~l~h~~~G~lsMAn~gpns~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P 180 (196)
T 2b71_A 101 GKSIYGEYFEDEINKELKHTGAGILSMSNNGPNTNSSQFFITLAPLPHLDGKHTIFARVSKNMTCIENIASVQTTATNKP 180 (196)
T ss_dssp CCBTTBSCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTCCB
T ss_pred CCccCCCcccccccCCcCcCCCeEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEecCHHHHHHHHhCCcCCCCCC
Confidence 9999999999995 579999999999999999999999999999999999999999999999999999999999988999
Q ss_pred ccceEEeeeeeeCCC
Q 021445 162 IADVTITDCGEIPEG 176 (312)
Q Consensus 162 ~~~i~I~~~g~l~~~ 176 (312)
..+|+|.+|.++.+|
T Consensus 181 ~~~i~I~~~~i~~dP 195 (196)
T 2b71_A 181 IFDLKILRTSTAVNA 195 (196)
T ss_dssp SSCCEEEEEEC----
T ss_pred CCCeEEEEEEEecCC
Confidence 999999999998654
No 26
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00 E-value=1.3e-46 Score=317.07 Aligned_cols=161 Identities=34% Similarity=0.553 Sum_probs=142.1
Q ss_pred CCeEEEEEEECCeeeeEEEEEEeCCCCchhHHhHHHHhhCCCCCCCCCCCCceecCCEEEEeecCCeEEeC-----CCCC
Q 021445 3 RPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKGVRFHRVIKGFMIQGG-----DISA 77 (312)
Q Consensus 3 ~~~v~~d~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~~Y~g~~~~rv~~~~~iq~G-----~~~~ 77 (312)
+.+|.|+++ .|+|+|+||++.||+||+||++||+.+ ||+|+.||||+|+|||||| |+.
T Consensus 6 ~~~v~l~T~-----~G~i~ieL~~~~aP~t~~NF~~L~~~g-----------~Ydg~~FhRvi~~f~iQgG~~~~~Dp~- 68 (201)
T 3bo7_A 6 KGYLRIVTT-----QGSLNIELHADMAPRACDSFLRLCAVK-----------YFDDTIFHRCIRNFMIQGGRAELRQPS- 68 (201)
T ss_dssp CEEEEEEET-----TEEEEEEECTTTCHHHHHHHHHHHHTT-----------TTTTCBEEEEETTTEEEECCGGGCCC--
T ss_pred ceEEEEEeC-----CCCEEEEEcCCCCcHHHHHHHHHHhcC-----------ccCCCEEEEeeCCCEEEcCcccccCCC-
Confidence 345555554 899999999999999999999999987 8999999999999999999 986
Q ss_pred CCCCCCCccc-------CCCCCCCc-ccccCCCcceEEeecCCCCCCCceEEEecCCCCCCCCCCceEEEEEeChHHHHH
Q 021445 78 GDGTGGESIY-------GLKFEDEN-FELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRS 149 (312)
Q Consensus 78 ~~~~~~~~~~-------~~~~~~e~-~~~~~~~~G~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~G~~vl~~ 149 (312)
++|.|+.++| |.+|++|. ..++|+++|+|||++.||++++|||||++++.++||++|+|||+|++||+||++
T Consensus 69 ~~g~gg~si~~~~~~~~g~~f~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~ 148 (201)
T 3bo7_A 69 KKKEVQQSPRSISGFPGGAPFEDEFDNRLVHQGIGVLSMANDGKHSNLSEFFITFKSCEHLNNKHTIFGRVVGGLDVLRQ 148 (201)
T ss_dssp ------CCSSCCCSSTTCCCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHH
T ss_pred CCCCCCccccccccccCCCcccCcccCCCCcCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCceEEEEEecCHHHHHH
Confidence 6788899999 88999994 688999999999999999999999999999999999999999999999999999
Q ss_pred HhcccCCCCCCcccceEEeeeeeeCCCCCCC
Q 021445 150 IEHVMTGDNDCPIADVTITDCGEIPEGADDG 180 (312)
Q Consensus 150 i~~~~~~~~~~P~~~i~I~~~g~l~~~~~~~ 180 (312)
|+.++++.+++|..+|+|.+|+++.+||+++
T Consensus 149 I~~~~t~~~~~P~~~i~I~~~~v~~dPf~d~ 179 (201)
T 3bo7_A 149 WEKLETDKKDKPLKPPKVEEIIVFKNPFEDA 179 (201)
T ss_dssp HTTCCBCTTSCBSSCCBEEEEEEEECCC---
T ss_pred HHhCCcCCCCCcCCCeEEEEEEEEcCCccCH
Confidence 9999999889999999999999999888885
No 27
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00 E-value=4.3e-46 Score=302.86 Aligned_cols=154 Identities=47% Similarity=0.700 Sum_probs=144.7
Q ss_pred CCeEEEEEEECCeeeeEEEEEEeCCCCchhHHhHHHHhhCCCCCCCCCCCCceecCCEEEEeecCCeEEeCCCCCCCCCC
Q 021445 3 RPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKGVRFHRVIKGFMIQGGDISAGDGTG 82 (312)
Q Consensus 3 ~~~v~~d~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~~Y~g~~~~rv~~~~~iq~G~~~~~~~~~ 82 (312)
.+.|.++++ .|+|+||||++.||++|+||++||+.+ ||+|+.||||+|+|+|||||+. ++|.+
T Consensus 5 ~~~v~~~T~-----~G~i~ieL~~~~aP~t~~NF~~L~~~g-----------~Y~g~~fhRvi~~f~iQgGd~~-~~g~g 67 (160)
T 2fu0_A 5 PKSAIIYTT-----MGDIHISLFYKECKKTVQNFSVHSING-----------YYNNCIFHRVIKHFMVQTGDPS-GDGTG 67 (160)
T ss_dssp CCEEEEEET-----TEEEEEEECTTTCHHHHHHHHHHHHTT-----------TTTTCBCCEEETTTEEEECCTT-SSSSC
T ss_pred CCEEEEEec-----CccEEEEEeCCCChHHHHHHHHHhccC-----------ccCCCEEEEEECCCEEEeCCcC-CCCCC
Confidence 456666665 899999999999999999999999987 8999999999999999999986 67889
Q ss_pred CCcccCCCCCCCcc-cccCCCcceEEeecCCCCCCCceEEEecCCCCCCCCCCceEEEEEeChHHHHHHhcccCCCCCCc
Q 021445 83 GESIYGLKFEDENF-ELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDNDCP 161 (312)
Q Consensus 83 ~~~~~~~~~~~e~~-~~~~~~~G~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~G~~vl~~i~~~~~~~~~~P 161 (312)
++++||.+|++|+. .++|.++|+||||+.+|++++|||||++.+.++||++|+|||+|++||+||++|+.++++.+++|
T Consensus 68 g~si~g~~~~dE~~~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P 147 (160)
T 2fu0_A 68 GESIWGNEFEDEFFDHLNHSKPFMVSMANCGPNTNGSQFFITTVPCPWLDFKHTVFGKVTQGSKIVLDIEKVRTDKRDKP 147 (160)
T ss_dssp CCCTTSSCBCCCCBTTBCSSSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCB
T ss_pred CCcccCCCccccccCCcccCCceEEEEecCCCCCcccEEEEECCCCCccCCCcEEEEEEEcCHHHHHHHHhCCcCCCCCc
Confidence 99999999999987 69999999999999999999999999999999999999999999999999999999999988999
Q ss_pred ccceEEeeeeee
Q 021445 162 IADVTITDCGEI 173 (312)
Q Consensus 162 ~~~i~I~~~g~l 173 (312)
..+|+|.+|.++
T Consensus 148 ~~~v~I~~~~v~ 159 (160)
T 2fu0_A 148 LEDIKILNIKIN 159 (160)
T ss_dssp SSCCBEEEEEEC
T ss_pred CCCeEEEEEEEe
Confidence 999999999875
No 28
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00 E-value=7.7e-46 Score=310.58 Aligned_cols=161 Identities=48% Similarity=0.826 Sum_probs=151.4
Q ss_pred CCCeEEEEEEECCeeeeEEEEEEeCCCCchhHHhHHHHhhCCCCCCCCCCCCceecCCEEEEeecCCeEEeCCCCCCCCC
Q 021445 2 ARPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKGVRFHRVIKGFMIQGGDISAGDGT 81 (312)
Q Consensus 2 ~~~~v~~d~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~~Y~g~~~~rv~~~~~iq~G~~~~~~~~ 81 (312)
.++.|.|+++ .|+|+||||.+.||++|+||++||+.+ ||+|+.||||+|+|+|||||+. +++.
T Consensus 10 ~~~~V~l~T~-----~G~I~ieL~~d~aP~tv~NF~~L~~~g-----------~Ydg~~FhRVi~~F~iQgGd~~-~~g~ 72 (203)
T 2k7n_A 10 QPPNVYLETS-----MGIIVLELYWKHAPKTCKNFAELARRG-----------YYNGTKFHRIIKDFMIQGGDPT-GTGR 72 (203)
T ss_dssp CCSEEEEEES-----SCEEEEEECTTTCTTHHHHHHHHHHHT-----------CGGGCEEEEEETTTEEEEECSS-SSSS
T ss_pred CCCEEEEEeC-----CCcEEEEEccCCCcHHHHHHHHHHhcC-----------ccCCCEEEEEeCCcEEEcCCCC-CCCC
Confidence 4788999987 799999999999999999999999987 8999999999999999999986 6788
Q ss_pred CCCcccCCCCCCCcc-cccCCCcceEEeecCCCCCCCceEEEecCCCCCCCCCCceEEEEEeChHHHHHHhcccCCCCCC
Q 021445 82 GGESIYGLKFEDENF-ELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDNDC 160 (312)
Q Consensus 82 ~~~~~~~~~~~~e~~-~~~~~~~G~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~G~~vl~~i~~~~~~~~~~ 160 (312)
++.++|+..|++|+. .++|.++|+|+|++.+|++++|||||++.+.++||++|+|||+|++||+||++|+.++++.+++
T Consensus 73 gg~si~g~~f~dE~~~~l~h~~~G~lsMAn~gpnsngSQFFIt~~~~~~LDg~~tVFG~VveGmdvv~kI~~~~t~~~~~ 152 (203)
T 2k7n_A 73 GGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDR 152 (203)
T ss_dssp CCCTTSCSCBCCCCCCSSCCCSSCEEEEEESSTTCEEEEEEEESSCCCSSTTTSCEEEEEESCHHHHHHHHSCCEEETTE
T ss_pred CCCccCCCcccccccccccCCCCeEEEEeeCCCCCcccEEEEEcCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCC
Confidence 899999999999984 8999999999999999999999999999999999999999999999999999999999988889
Q ss_pred cccceEEeeeeeeCCCCCC
Q 021445 161 PIADVTITDCGEIPEGADD 179 (312)
Q Consensus 161 P~~~i~I~~~g~l~~~~~~ 179 (312)
|..+|+|.+|+++..+...
T Consensus 153 P~~~V~I~~~~v~~~~~s~ 171 (203)
T 2k7n_A 153 PVDDVKIIKAYPSGGGGSG 171 (203)
T ss_dssp ECCCCBEEEEEECCCCCCC
T ss_pred cCCCeEEEEEEEEecCCCC
Confidence 9999999999999875554
No 29
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=100.00 E-value=1.3e-45 Score=306.19 Aligned_cols=159 Identities=40% Similarity=0.732 Sum_probs=148.5
Q ss_pred CCeEEEEEEECCeeeeEEEEEEeCCCCchhHHhHHHHhhCCCCCCCCCCCCceecCCEEEEeecCCeEEeCCCCCCCCCC
Q 021445 3 RPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKGVRFHRVIKGFMIQGGDISAGDGTG 82 (312)
Q Consensus 3 ~~~v~~d~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~~Y~g~~~~rv~~~~~iq~G~~~~~~~~~ 82 (312)
+++|+|+++ .|+|+||||++.||++|+||++||+.+ ||+|+.||||+|+|+|||||+. ++|.|
T Consensus 24 ~~~V~l~T~-----~G~I~ieL~~~~aP~tv~NF~~L~~~g-----------~Y~g~~FhRvi~~f~iQgGd~~-~~g~g 86 (185)
T 2hq6_A 24 NGKVLLKTT-----AGDIDIELWSKEAPKACRNFIQLCLEA-----------YYDNTIFHRVVPGFIVQGGDPT-GTGSG 86 (185)
T ss_dssp BCEEEEEET-----TEEEEEEEBTTTCHHHHHHHHHHHHTT-----------TTTTEECCEEETTTEEEECCTT-SSSSC
T ss_pred CCEEEEEeC-----CccEEEEEeCCCCcHHHHHHHHHhhcC-----------ccCCCEEEEEECCCEEEcCCCC-CCCCC
Confidence 678999987 799999999999999999999999987 8999999999999999999986 67888
Q ss_pred CCcccCCCCCCCcc-cccCCCcceEEeecCCCCCCCceEEEecCCCCCCCCCCceEEEEEeChHHH--HHHhcccCCCCC
Q 021445 83 GESIYGLKFEDENF-ELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVV--RSIEHVMTGDND 159 (312)
Q Consensus 83 ~~~~~~~~~~~e~~-~~~~~~~G~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~G~~vl--~~i~~~~~~~~~ 159 (312)
+.++||.+|++|+. .++|+++|+||||+.++++++|||||++++.++||++|+|||+|+ |++++ ++|+.++++.++
T Consensus 87 g~si~g~~~~dE~~~~l~h~~~G~lsMA~~g~~s~gSQFFIt~~~~~~LDg~~tVFG~V~-G~~v~~~~~i~~~~~~~~~ 165 (185)
T 2hq6_A 87 GESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTVYNMLRLSEVDIDDDE 165 (185)
T ss_dssp CCCTTSSCBCCCCBTTBCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHHHTTCSCBCTTS
T ss_pred CCcccCCccccccccCcccCCCeEEEEccCCCCCccceEEEECCCCCccCCCceEEEEEE-eCeeehhhHHhhCCcCCCC
Confidence 99999999999986 688999999999999999999999999999999999999999999 88774 689999998889
Q ss_pred CcccceEEeeeeeeCCCCCC
Q 021445 160 CPIADVTITDCGEIPEGADD 179 (312)
Q Consensus 160 ~P~~~i~I~~~g~l~~~~~~ 179 (312)
+|..+|+|.+|+++.+||++
T Consensus 166 ~P~~~v~I~~~~v~~~Pf~d 185 (185)
T 2hq6_A 166 RPHNPHKIKSCEVLFNPFDD 185 (185)
T ss_dssp CBSSCCEEEEEEEEECTTC-
T ss_pred CCCCCeEEEEEEEeCCCCCC
Confidence 99999999999999988874
No 30
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=100.00 E-value=3.3e-45 Score=304.95 Aligned_cols=163 Identities=44% Similarity=0.696 Sum_probs=144.8
Q ss_pred CCCeEEEEEEECCeeeeEEEEEEeCCCCchhHHhHHHHhhCCCCCCCC-CC---CCceecCCEEEEeecCCeEEeCCCCC
Q 021445 2 ARPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPN-TG---VPLHYKGVRFHRVIKGFMIQGGDISA 77 (312)
Q Consensus 2 ~~~~v~~d~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~-~~---~~~~Y~g~~~~rv~~~~~iq~G~~~~ 77 (312)
+++.|.|++. .|+|+|+||++.||+||+||++||++.+++... ++ ..+||+|+.||||+|+|||||||+.
T Consensus 22 ~~~~v~l~t~-----~G~I~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~Y~g~~FhRVi~~fmiQgGd~~- 95 (191)
T 1w74_A 22 ATATATLHTN-----RGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPT- 95 (191)
T ss_dssp CSEEEEEEET-----TEEEEEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCSSTTEEEEEEETTTEEEECCTT-
T ss_pred CCeEEEEEec-----ceeEEEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCccCCCEEEEEeCCCEEecCCCC-
Confidence 4566777665 899999999999999999999999987765321 22 2369999999999999999999975
Q ss_pred CCCCCCCcccCCCCCCCc-ccccCCCcceEEeecCCCCCCCceEEEecCCCCCCCCCCceEEEEEe--ChHHHHHHhccc
Q 021445 78 GDGTGGESIYGLKFEDEN-FELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIK--GMGVVRSIEHVM 154 (312)
Q Consensus 78 ~~~~~~~~~~~~~~~~e~-~~~~~~~~G~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~--G~~vl~~i~~~~ 154 (312)
++|+++ +|..|++|. ..++|+++|+||||+.||++++||||||+.+.++||++|+|||+|++ ||+||++|+.++
T Consensus 96 g~G~gg---~g~~f~dE~~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~~Gmdvv~~I~~~~ 172 (191)
T 1w74_A 96 GTGRGG---PGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTA 172 (191)
T ss_dssp SSSSCC---SSCCBCCCCCTTCCSCSSSEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEECSHHHHHHHHHHHTSC
T ss_pred CCCCCC---CCCccccccccCCCcCCCcEEEEeeCCCCCccceEEEEcCCCcccCCCeeEEEEEEECCCHHHHHHHHcCC
Confidence 566666 588899994 68999999999999999999999999999999999999999999999 999999999999
Q ss_pred CCCCCCcccceEEeeeeee
Q 021445 155 TGDNDCPIADVTITDCGEI 173 (312)
Q Consensus 155 ~~~~~~P~~~i~I~~~g~l 173 (312)
++.+++|..+|+|.+|+++
T Consensus 173 t~~~~~P~~~v~I~~~~i~ 191 (191)
T 1w74_A 173 TDGNDRPTDPVVIESITIS 191 (191)
T ss_dssp BCTTSCBSSCCEEEEEEEC
T ss_pred cCCCCCcCCCeEEEEEEEC
Confidence 9988999999999999974
No 31
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=1.2e-45 Score=304.31 Aligned_cols=152 Identities=51% Similarity=0.744 Sum_probs=141.5
Q ss_pred EEEECCeeeeEEEEEEeCCCCchhHHhHHHHhhCCCCCCCCCCCCceecCCEEEEeecCCeEEeCCCCCCCCCCCCcccC
Q 021445 9 DISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKGVRFHRVIKGFMIQGGDISAGDGTGGESIYG 88 (312)
Q Consensus 9 d~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~~Y~g~~~~rv~~~~~iq~G~~~~~~~~~~~~~~~ 88 (312)
+..+-.++.|+|+|+||++.||++|+||++||+.+ ||+|+.||||+|+|+|||||+. ++|.++.++||
T Consensus 22 ~~v~~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g-----------~Y~g~~FhRvi~~f~iQgGd~~-~~g~gg~si~g 89 (176)
T 2a2n_A 22 DSAIIHTSMGDIHTKLFPVECPKTVENFCVHSRNG-----------YYNGHTFHRIIKGFMIQTGDPT-GTGMGGESIWG 89 (176)
T ss_dssp SEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTT-----------TTTTCBCCEEETTTEEEECCTT-SSSSCCCCTTS
T ss_pred CEEEEEecCccEEEEEeCCCChHHHHHHHHHhhcC-----------ccCCCEEEEEECCcEEEccCCC-CCCCCCCcccC
Confidence 33344456899999999999999999999999987 8999999999999999999986 67889999999
Q ss_pred CCCCCCcc-cccCCCcceEEeecCCCCCCCceEEEecCCCCCCCCCCceEEEEEeChHHHHHHhcccCC-CCCCcccceE
Q 021445 89 LKFEDENF-ELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTG-DNDCPIADVT 166 (312)
Q Consensus 89 ~~~~~e~~-~~~~~~~G~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~G~~vl~~i~~~~~~-~~~~P~~~i~ 166 (312)
..|++|+. .++|.++|+|||++.+|++++|||||++.+.++||++|+|||+|++||+||++|+.++++ .+++|..+|+
T Consensus 90 ~~~~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~v~ 169 (176)
T 2a2n_A 90 GEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVS 169 (176)
T ss_dssp SCBCCCCCTTCCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTTCCBSSCCB
T ss_pred CccccccccccccCCceEEEEEeCCCCCcccEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHcCCccCCCCccCCCeE
Confidence 99999987 699999999999999999999999999999999999999999999999999999999998 5799999999
Q ss_pred Eeeeee
Q 021445 167 ITDCGE 172 (312)
Q Consensus 167 I~~~g~ 172 (312)
|.+|.+
T Consensus 170 I~~v~v 175 (176)
T 2a2n_A 170 IINITV 175 (176)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999976
No 32
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=3.6e-44 Score=307.13 Aligned_cols=162 Identities=33% Similarity=0.577 Sum_probs=149.0
Q ss_pred CCeEEEEEEECCeeeeEEEEEEeCCCCchhHHhHHHHhhCCCCCCCCCCCCceecCCEEEEeecCCeEEeCCCCCCCCCC
Q 021445 3 RPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKGVRFHRVIKGFMIQGGDISAGDGTG 82 (312)
Q Consensus 3 ~~~v~~d~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~~Y~g~~~~rv~~~~~iq~G~~~~~~~~~ 82 (312)
+++|+|+++ .|+|+|+||.+.||++|+||++||+.+ ||+|+.||||+|+|||||||+. ++|+|
T Consensus 21 ~~~V~l~T~-----~G~I~ieL~~d~aP~tv~NF~~L~~~g-----------~Ydgt~FhRVi~~FmiQgGdp~-~~G~G 83 (232)
T 3bkp_A 21 RGKVVLHTS-----LGDLDVELWARECPLACRNFVQLCLEG-----------YYVNTIFHRVVKDFIVQGGDPT-GTGRG 83 (232)
T ss_dssp BCEEEEEET-----TEEEEEEEBTTTCHHHHHHHHHHHHHT-----------TTTTCBEEEEETTTEEEECCTT-SSSSC
T ss_pred CCEEEEEEC-----CCcEEEEEcCCCCcHHHHHHHHHhhcC-----------ccCCCEEEEEeCCCEEEcCCCC-CCCCC
Confidence 578888887 799999999999999999999999987 8999999999999999999987 77889
Q ss_pred CCccc--CCCCCCCcc-cccCCCcceEEeecCCC--------------CCCCceEEEecCCCCCCCCCCceEEEEEeChH
Q 021445 83 GESIY--GLKFEDENF-ELKHERKGMLSMANAGP--------------NTNGSQFFITTTRTSHLDGKHVVFGRVIKGMG 145 (312)
Q Consensus 83 ~~~~~--~~~~~~e~~-~~~~~~~G~l~~~~~~~--------------~~~~sqF~I~~~~~~~ld~~~~vfG~V~~G~~ 145 (312)
+.++| |.+|++|.. .++|+.+|+|||++.++ ++++||||||+++.++||++|+|||+|+ |++
T Consensus 84 g~si~~~g~~f~dE~~~~l~h~~~G~lsMA~~g~~~~~~~n~e~g~~~~sngSQFFIt~~~~p~LDg~~tVFG~Vv-g~~ 162 (232)
T 3bkp_A 84 GADTTFDGKPFDVETHPRLKFRYRGLVGVANLGRSSKDAENDERGRSLGTNGNQFFITLARADVLNNAYTLFGKVT-GHT 162 (232)
T ss_dssp CCCCTTTTCCBCCCCCTTCCCCSTTEEEECCCC----------------CBCSCEEEESSCCGGGTTTSCEEEEEC-GGG
T ss_pred CCccccCCCccCCccccCcCcCCCeEEEEeccCCcccccccccccccCCCcCCEEEEECCCCcccCCCccEEEEEE-eCc
Confidence 99999 899999986 78999999999999997 6999999999999999999999999999 776
Q ss_pred H--HHHHhcccCCCCCCcccceEEeeeeeeCCCCCCCCC
Q 021445 146 V--VRSIEHVMTGDNDCPIADVTITDCGEIPEGADDGIS 182 (312)
Q Consensus 146 v--l~~i~~~~~~~~~~P~~~i~I~~~g~l~~~~~~~~~ 182 (312)
+ +++|+.++++.+++|..+|+|.+|+++.+||++..+
T Consensus 163 v~~v~kI~~~~t~~~~~P~~~i~I~~~~vl~dPf~d~~~ 201 (232)
T 3bkp_A 163 LYNLMKFNDLEVGKEDRPMTPPFIKSVDVLWNPFEDLVP 201 (232)
T ss_dssp HHHHHHHTTSCBCGGGCBSSCCBEEEEEEEECCCTTCCC
T ss_pred hHHHHHHHcCCcCCCCCcCCCeEEEEEEEEcCChhhhhh
Confidence 6 889999999888999999999999999999987643
No 33
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=100.00 E-value=8.2e-44 Score=291.86 Aligned_cols=153 Identities=31% Similarity=0.502 Sum_probs=137.7
Q ss_pred CCCeEEEEEEECCeeeeEEEEEEeCCCCchhHHhHHHHhhCCCCCCCCCCCCceecCCEEEEeecCCeEEeCCCCCCCCC
Q 021445 2 ARPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKGVRFHRVIKGFMIQGGDISAGDGT 81 (312)
Q Consensus 2 ~~~~v~~d~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~~Y~g~~~~rv~~~~~iq~G~~~~~~~~ 81 (312)
++|+|+|+++ .|+|+|+||++.||+||+||++||+.+ ||+|+.||||+|+|||||||+....+
T Consensus 3 ~~~~v~~~t~-----~G~i~ieL~~~~aP~t~~NF~~L~~~g-----------~Y~g~~FhRvi~~f~iQgGd~~~~~~- 65 (166)
T 1v9t_A 3 GDPHVLLTTS-----AGNIELELDKQKAPVSVQNFVDYVNSG-----------FYNNTTFHRVIPGFMIQGGGFTEQMQ- 65 (166)
T ss_dssp CSCEEEEEET-----TEEEEEEECTTTCHHHHHHHHHHHHTT-----------TTTTCBEEEEETTTEEEESSBCTTCC-
T ss_pred CCeEEEEEeC-----CccEEEEEcCCCCcHHHHHHHHHhccC-----------CCCCCEEEEEECCcEEEcCCcCcCCC-
Confidence 4899999976 899999999999999999999999987 89999999999999999999864322
Q ss_pred CCCcccCCCCCCCcccccCCCcceEEeecC-CCCCCCceEEEecCCCCCCCCC-----CceEEEEEeChHHHHHHhcccC
Q 021445 82 GGESIYGLKFEDENFELKHERKGMLSMANA-GPNTNGSQFFITTTRTSHLDGK-----HVVFGRVIKGMGVVRSIEHVMT 155 (312)
Q Consensus 82 ~~~~~~~~~~~~e~~~~~~~~~G~l~~~~~-~~~~~~sqF~I~~~~~~~ld~~-----~~vfG~V~~G~~vl~~i~~~~~ 155 (312)
...++.+|++|.....|+.+|+||||+. +|++++|||||++.+.++||++ |+|||+|++||+||++|+.+++
T Consensus 66 --~~~~g~~~~dE~~~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~tvFG~Vv~G~dvv~~I~~~~~ 143 (166)
T 1v9t_A 66 --QKKPNPPIKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPT 143 (166)
T ss_dssp --BCCCCCCBCCCGGGSCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSCCCCCEEEEEEECHHHHHHHHTSCE
T ss_pred --CCCCCCcccccccccccCCceEEEEeecCCCCCccceEEEEeCCccccCCccCcCCeeEEEEEecCHHHHHHHHhCCC
Confidence 2345778999987656678999999997 5999999999999999999998 9999999999999999999998
Q ss_pred CC----CCCcccceEEeeeeee
Q 021445 156 GD----NDCPIADVTITDCGEI 173 (312)
Q Consensus 156 ~~----~~~P~~~i~I~~~g~l 173 (312)
+. .++|..+|+|.+|.++
T Consensus 144 ~~~~~~~~~P~~~v~I~~~~v~ 165 (166)
T 1v9t_A 144 HDVGPYQNVPSKPVVILSATVL 165 (166)
T ss_dssp EEETTEEEEESSCCBEEEEEEC
T ss_pred CCCCccCCCcCCCeEEEEEEEe
Confidence 76 4789999999999987
No 34
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=100.00 E-value=7e-43 Score=287.01 Aligned_cols=153 Identities=33% Similarity=0.502 Sum_probs=136.4
Q ss_pred CCCeEEEEEEECCeeeeEEEEEEeCCCCchhHHhHHHHhhCCCCCCCCCCCCceecCCEEEEeecCCeEEeCCCCCCCCC
Q 021445 2 ARPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKGVRFHRVIKGFMIQGGDISAGDGT 81 (312)
Q Consensus 2 ~~~~v~~d~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~~Y~g~~~~rv~~~~~iq~G~~~~~~~~ 81 (312)
.+|.|.|+++ .|+|+||||++.||+||+||++||+.+ ||+|+.||||+|+|+|||||+..+.+
T Consensus 2 p~~~v~l~T~-----~G~i~ieL~~~~aP~t~~NF~~L~~~g-----------~Y~g~~FhRvi~~f~iQgGd~~~~~~- 64 (167)
T 3s6m_A 2 PGSMVELHTN-----HGVIKLELDEAKAPKTVENFLNYVKKG-----------HYDGTIFHRVINGFMIQGGGFEPGLK- 64 (167)
T ss_dssp CCCEEEEEET-----TEEEEEEECTTTCHHHHHHHHHHHHHT-----------TTTTEECCEEETTTEEEESSEETTTE-
T ss_pred CCcEEEEEeC-----CceEEEEEeCCCCcHHHHHHHHHhhhc-----------ccCCCEeEEecCCcEEEeccccCCCC-
Confidence 4788888877 899999999999999999999999987 89999999999999999999864332
Q ss_pred CCCcccCCCCCCCcccccCCCcceEEeec-CCCCCCCceEEEecCCCCCCCCC--------CceEEEEEeChHHHHHHhc
Q 021445 82 GGESIYGLKFEDENFELKHERKGMLSMAN-AGPNTNGSQFFITTTRTSHLDGK--------HVVFGRVIKGMGVVRSIEH 152 (312)
Q Consensus 82 ~~~~~~~~~~~~e~~~~~~~~~G~l~~~~-~~~~~~~sqF~I~~~~~~~ld~~--------~~vfG~V~~G~~vl~~i~~ 152 (312)
...++.++++|.....++.+|+||||+ .+|++++|||||++.+.++||++ |+|||+|++||+||++|++
T Consensus 65 --~~~~~~~~~~E~~~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~~~~~VFG~Vv~G~dvv~~I~~ 142 (167)
T 3s6m_A 65 --QKPTDAPIANEANNGLKNDTYTIAMARTNDPHSATAQFFINVNDNEFLNHSSPTPQGWGYAVFGKVVEGQDIVDKIKA 142 (167)
T ss_dssp --ECCCCCCBCCCGGGCCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTCCCCEEEEEEECHHHHHHHTT
T ss_pred --CCCCCCccCCcccccccCCccEEEEecCCCCCCccceEEEEcCCchhcCCcccccCCCCceEEEEEEcCHHHHHHHHc
Confidence 234577788886544445899999999 57999999999999999999998 9999999999999999999
Q ss_pred ccCCC----CCCcccceEEeeeeee
Q 021445 153 VMTGD----NDCPIADVTITDCGEI 173 (312)
Q Consensus 153 ~~~~~----~~~P~~~i~I~~~g~l 173 (312)
++++. +++|.++|+|.+|.++
T Consensus 143 ~~t~~~~~~~~~P~~~v~I~~~~il 167 (167)
T 3s6m_A 143 VKTGSKGFHQDVPNDDVVIEKAVVV 167 (167)
T ss_dssp SCBBC---CBTCBSSCCEEEEEEEC
T ss_pred CCcCCCcccCCCcCCCeEEEEEEEC
Confidence 99987 5899999999999875
No 35
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=100.00 E-value=5.3e-43 Score=286.47 Aligned_cols=144 Identities=35% Similarity=0.588 Sum_probs=130.5
Q ss_pred eeeeEEEEEEeCCCCchhHHhHHHHhhCCCCCCCCCCCCceecCCEEEEeecCCeEEeCCCCCCCCCCCCcccCCCCCCC
Q 021445 15 ELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKGVRFHRVIKGFMIQGGDISAGDGTGGESIYGLKFEDE 94 (312)
Q Consensus 15 ~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~~Y~g~~~~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e 94 (312)
++.|+|+|+||++.||+||+||++||+.+ ||+|+.||||+|+|||||||+..+. +.++++.+|++|
T Consensus 6 T~~G~i~ieL~~~~aP~t~~NF~~L~~~g-----------~Y~g~~FhRvi~~f~iQgGd~~~~~---g~~~~g~~~~dE 71 (164)
T 1lop_A 6 TNHGDIVIKTFDDKAPETVKNFLDYCREG-----------FYNNTIFHRVINGFMIQGGGFEPGM---KQKATKEPIKNE 71 (164)
T ss_dssp ETTEEEEEEECTTTSHHHHHHHHHHHHTT-----------TTTTEECCEEETTTEEEESSEETTT---EECCCCCCBCCC
T ss_pred eCCCCEEEEEeCCCCcHHHHHHHHHHhcC-----------CCCCCEEEEEeCCceEecCCcccCC---CcCCCCCccccc
Confidence 34899999999999999999999999987 8999999999999999999986433 345778899999
Q ss_pred ccc-ccCCCcceEEeecC-CCCCCCceEEEecCCCCCCCCC--------CceEEEEEeChHHHHHHhcccCCC----CCC
Q 021445 95 NFE-LKHERKGMLSMANA-GPNTNGSQFFITTTRTSHLDGK--------HVVFGRVIKGMGVVRSIEHVMTGD----NDC 160 (312)
Q Consensus 95 ~~~-~~~~~~G~l~~~~~-~~~~~~sqF~I~~~~~~~ld~~--------~~vfG~V~~G~~vl~~i~~~~~~~----~~~ 160 (312)
+.. ++| .+|+||||+. +|++++|||||++.+.++||++ |+|||+|++||+||++|+.++++. +++
T Consensus 72 ~~~~l~~-~~G~lsmA~~~~p~s~gSQFfI~~~~~~~Ld~~~~~~~~~~~tvFG~Vv~G~dvv~~I~~~~t~~~~~~~~~ 150 (164)
T 1lop_A 72 ANNGLKN-TRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDEVDKIKGVATGRSGMHQDV 150 (164)
T ss_dssp CCSSCCC-CTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTSCCCEEEEEEECHHHHHHHHTSCEEEETTEEEE
T ss_pred ccccccc-CccEEEEeecCCCCCccceEEEEcCCccccCCccccccCCceEEEEEEecCHHHHHHHHhCCcCCccccCCC
Confidence 875 555 7999999975 7999999999999999999998 999999999999999999999875 479
Q ss_pred cccceEEeeeeee
Q 021445 161 PIADVTITDCGEI 173 (312)
Q Consensus 161 P~~~i~I~~~g~l 173 (312)
|..+|+|.+|+++
T Consensus 151 P~~~v~I~~~~v~ 163 (164)
T 1lop_A 151 PKEDVIIESVTVS 163 (164)
T ss_dssp ESSCCEEEEEEEC
T ss_pred cCCCeEEEEEEEe
Confidence 9999999999987
No 36
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=100.00 E-value=3.1e-37 Score=278.64 Aligned_cols=137 Identities=25% Similarity=0.402 Sum_probs=121.4
Q ss_pred CCeEEEEEEECC---eeeeEEEEEEeCCCCchhHHhHHHHhhCCCCCCCCCCCCceecCCEEEEeecCCeEEeCCCCCCC
Q 021445 3 RPRCFLDISIGV---ELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKGVRFHRVIKGFMIQGGDISAGD 79 (312)
Q Consensus 3 ~~~v~~d~~~~~---~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~~Y~g~~~~rv~~~~~iq~G~~~~~~ 79 (312)
|+.|.|++++.+ +..|+|+|+||++.||+||+||++||+.+ ||+|+.|||| |+|||||||+. ++
T Consensus 170 ra~V~m~t~~~~~~~~~~G~I~IeL~~d~AP~Tv~NFl~L~~~G-----------fYdGt~FHRV-~gFmIQgGDp~-g~ 236 (369)
T 3rfy_A 170 RASVDMKVKIKDNPNIEDCVFRIVLDGYNAPVTAGNFVDLVERH-----------FYDGMEIQRS-DGFVVQTGDPE-GP 236 (369)
T ss_dssp EEEEEEEEECCSCSSCSEEEEEEEEETTTCHHHHHHHHHHHHTT-----------TTTTEECEEE-EEEEECCCCCC-CC
T ss_pred CeEEEEEEeccCCCcccceEEEEEEeCCCCcHHHHHHHHHhhcC-----------CcCCCeeeee-CCeeEecCCCC-CC
Confidence 567778887653 36899999999999999999999999987 9999999999 99999999986 45
Q ss_pred CCC---------------------CCcccCCCCCCCcc-----cccCCCcceEEeecC--CCCCCCceEEEec-------
Q 021445 80 GTG---------------------GESIYGLKFEDENF-----ELKHERKGMLSMANA--GPNTNGSQFFITT------- 124 (312)
Q Consensus 80 ~~~---------------------~~~~~~~~~~~e~~-----~~~~~~~G~l~~~~~--~~~~~~sqF~I~~------- 124 (312)
|+| +.++|+..|++|++ .++|+.+|+|||++. +|++++|||||++
T Consensus 237 G~G~~~~~~g~~~~iP~E~~~~G~g~piyg~~fedegf~~~~~~L~h~~~G~LsMAns~~gPnSngSQFFItl~d~~L~~ 316 (369)
T 3rfy_A 237 AEGFIDPSTEKTRTVPLEIMVTGEKTPFYGSTLEELGLYKAQVVIPFNAFGTMAMAREEFENDSGSSQVFWLLKESELTP 316 (369)
T ss_dssp CSCCCSCCCCCCCSSSSSSCSSSSCCSCCCSSTGGGTEEEEEEEECCCCCCCCCCSSCCCCCCCSSCCCCCCCEEEEECS
T ss_pred CCCccCcccCcCcccCccccccCCCCCcCCCccccccccccccccccCCCceEEEeecCCCCCCccceEEEEecccccCC
Confidence 544 35678888888754 688999999999998 7999999999999
Q ss_pred CCCCCCCCCCceEEEEEeChHHHHHHhc
Q 021445 125 TRTSHLDGKHVVFGRVIKGMGVVRSIEH 152 (312)
Q Consensus 125 ~~~~~ld~~~~vfG~V~~G~~vl~~i~~ 152 (312)
++.++||++|+|||+|++||+||++|+.
T Consensus 317 ~~~~~LDgkytVFG~VveGmdVVdkI~~ 344 (369)
T 3rfy_A 317 SNSNILDGRYAVFGYVTDNEDFLADLKV 344 (369)
T ss_dssp CCCSSSCSCEEEEEEEEESTTGGGGCCT
T ss_pred CCCcccCCCeeEEEEEecCHHHHHHHhC
Confidence 4689999999999999999999999987
No 37
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.71 E-value=6.8e-17 Score=130.82 Aligned_cols=107 Identities=30% Similarity=0.438 Sum_probs=95.6
Q ss_pred hhhhhhhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHH
Q 021445 205 LSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGAL 284 (312)
Q Consensus 205 ~~~~~~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai 284 (312)
.++.++.+..+++.|+.+|+.|+|++|+..|++||.++........+..++...+.+....+|.|+|.||+++|+|++|+
T Consensus 4 ~~e~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~ 83 (162)
T 3rkv_A 4 EDDKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAE 83 (162)
T ss_dssp ----CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHH
Confidence 35677899999999999999999999999999999998776666666666677788999999999999999999999999
Q ss_pred HHHHHHHHcCCCchHHHHHHHHHhhhh
Q 021445 285 LDTEFAMRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 285 ~~~~~al~l~p~~~Ka~~rrg~a~~~L 311 (312)
.+|++||+++|.++++|+++|.+|..+
T Consensus 84 ~~~~~al~~~p~~~~a~~~~g~~~~~~ 110 (162)
T 3rkv_A 84 ETSSEVLKREETNEKALFRRAKARIAA 110 (162)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCcchHHHHHHHHHHHHH
Confidence 999999999999999999999999876
No 38
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.62 E-value=4e-15 Score=120.20 Aligned_cols=97 Identities=11% Similarity=0.024 Sum_probs=83.9
Q ss_pred hhhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHH
Q 021445 209 MNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTE 288 (312)
Q Consensus 209 ~~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~ 288 (312)
...+..+++.|+.+|+.|+|++|+.+|++||++....+.. +.....+....+|+|+|.|+.++|+|++|+.+|+
T Consensus 8 ~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~------~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~ 81 (159)
T 2hr2_A 8 VVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPE------EAFDHAGFDAFCHAGLAEALAGLRSFDEALHSAD 81 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTT------SCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcch------hhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 5578889999999999999999999999999975443221 1222556677799999999999999999999999
Q ss_pred HHHHc-------CCCchHHH----HHHHHHhhhh
Q 021445 289 FAMRD-------GDDNVKAL----FRQGQVSIIL 311 (312)
Q Consensus 289 ~al~l-------~p~~~Ka~----~rrg~a~~~L 311 (312)
+||++ +|++++|| |+||.||..|
T Consensus 82 kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~l 115 (159)
T 2hr2_A 82 KALHYFNRRGELNQDEGKLWISAVYSRALALDGL 115 (159)
T ss_dssp HHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhhhccccCCCchHHHHHHHHHhHHHHHHHC
Confidence 99999 99999999 9999999876
No 39
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.61 E-value=2.1e-15 Score=117.55 Aligned_cols=83 Identities=28% Similarity=0.450 Sum_probs=78.8
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.++.++++|+.+|++|+|++|+..|++||+ ++|....+|.|+|.||+++|++++|+.++++|
T Consensus 12 ~a~~~~~~G~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 73 (126)
T 4gco_A 12 LAQEEKNKGNEYFKKGDYPTAMRHYNEAVK------------------RDPENAILYSNRAACLTKLMEFQRALDDCDTC 73 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------hCCCCHHHHHHHhhHHHhhccHHHHHHHHHHH
Confidence 578899999999999999999999999999 66777889999999999999999999999999
Q ss_pred HHcCCCchHHHHHHHHHhhhh
Q 021445 291 MRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 291 l~l~p~~~Ka~~rrg~a~~~L 311 (312)
|+++|+++++|+++|.+|..+
T Consensus 74 l~~~p~~~~a~~~lg~~~~~~ 94 (126)
T 4gco_A 74 IRLDSKFIKGYIRKAACLVAM 94 (126)
T ss_dssp HHHCTTCHHHHHHHHHHHHHT
T ss_pred HHhhhhhhHHHHHHHHHHHHC
Confidence 999999999999999999876
No 40
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.50 E-value=2.6e-14 Score=111.43 Aligned_cols=85 Identities=25% Similarity=0.314 Sum_probs=76.0
Q ss_pred hhhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHH
Q 021445 209 MNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTE 288 (312)
Q Consensus 209 ~~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~ 288 (312)
.+.+..+++.|+.+|++|+|++|+..|++||+ ++|....+|.|+|.||+++|+|++|+++|+
T Consensus 5 ~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~------------------~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~ 66 (127)
T 4gcn_A 5 TDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIE------------------LDPSNITFYNNKAAVYFEEKKFAECVQFCE 66 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------hCCCCHHHHHhHHHHHHHhhhHHHHHHHHH
Confidence 45778899999999999999999999999999 566678899999999999999999999999
Q ss_pred HHHHcCCCch-------HHHHHHHHHhhhh
Q 021445 289 FAMRDGDDNV-------KALFRQGQVSIIL 311 (312)
Q Consensus 289 ~al~l~p~~~-------Ka~~rrg~a~~~L 311 (312)
+||+++|++. ++|+++|.++..+
T Consensus 67 ~al~~~~~~~~~~~~~a~~~~~lg~~~~~~ 96 (127)
T 4gcn_A 67 KAVEVGRETRADYKLIAKAMSRAGNAFQKQ 96 (127)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhCcccchhhHHHHHHHHHHHHHHHHc
Confidence 9999998764 5788888877654
No 41
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.40 E-value=1.6e-12 Score=123.06 Aligned_cols=105 Identities=23% Similarity=0.337 Sum_probs=91.0
Q ss_pred ChhhhhhhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHH
Q 021445 204 ELSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGA 283 (312)
Q Consensus 204 ~~~~~~~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~A 283 (312)
..+.....+..++++|+.+++.++|++|+..|++||++.... ....+++...+.+....+|+|+|.||+++++|++|
T Consensus 260 ~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~---~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A 336 (457)
T 1kt0_A 260 DTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEME---YGLSEKESKASESFLLAAFLNLAMCYLKLREYTKA 336 (457)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTC---CSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhccc---ccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 344455678889999999999999999999999999975442 12344556668888899999999999999999999
Q ss_pred HHHHHHHHHcCCCchHHHHHHHHHhhhh
Q 021445 284 LLDTEFAMRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 284 i~~~~~al~l~p~~~Ka~~rrg~a~~~L 311 (312)
+.+|++||+++|+++++||++|.||..+
T Consensus 337 ~~~~~~al~~~p~~~~a~~~~g~a~~~~ 364 (457)
T 1kt0_A 337 VECCDKALGLDSANEKGLYRRGEAQLLM 364 (457)
T ss_dssp HHHHHHHHHHSTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCccHHHHHHHHHHHHHc
Confidence 9999999999999999999999999876
No 42
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.40 E-value=8.1e-13 Score=101.76 Aligned_cols=83 Identities=20% Similarity=0.356 Sum_probs=77.5
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+.+.|+.+++.|+|++|+..|+++|+ +.|....+|.|+|.|++++|+|++|+.+++++
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~------------------~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~a 64 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIK------------------RAPEDARGYSNRAAALAKLMSFPEAIADCNKA 64 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHH------------------hCCCChHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 467899999999999999999999999999 45566789999999999999999999999999
Q ss_pred HHcCCCchHHHHHHHHHhhhh
Q 021445 291 MRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 291 l~l~p~~~Ka~~rrg~a~~~L 311 (312)
++++|+++++|+++|.++..+
T Consensus 65 l~~~p~~~~~~~~lg~~~~~~ 85 (126)
T 3upv_A 65 IEKDPNFVRAYIRKATAQIAV 85 (126)
T ss_dssp HHHCTTCHHHHHHHHHHHHHT
T ss_pred HHhCCCcHHHHHHHHHHHHHH
Confidence 999999999999999999865
No 43
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.35 E-value=2.8e-12 Score=95.77 Aligned_cols=84 Identities=18% Similarity=0.251 Sum_probs=76.8
Q ss_pred hhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHH
Q 021445 210 NAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEF 289 (312)
Q Consensus 210 ~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~ 289 (312)
..+..+...|+.+++.|+|++|+..|++|++ +.|....++.|+|.|++++|+|++|+.++++
T Consensus 2 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~------------------~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 63 (111)
T 2l6j_A 2 SQFEKQKEQGNSLFKQGLYREAVHCYDQLIT------------------AQPQNPVGYSNKAMALIKLGEYTQAIQMCQQ 63 (111)
T ss_dssp THHHHHHHHHHHHHTTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHcCCHHHHHHHHHHHHh------------------cCCCCHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 3567789999999999999999999999999 4455577899999999999999999999999
Q ss_pred HHHcCCCc------hHHHHHHHHHhhhh
Q 021445 290 AMRDGDDN------VKALFRQGQVSIIL 311 (312)
Q Consensus 290 al~l~p~~------~Ka~~rrg~a~~~L 311 (312)
+++++|++ .++++++|.++..+
T Consensus 64 al~~~p~~~~~~~~~~~~~~~~~~~~~~ 91 (111)
T 2l6j_A 64 GLRYTSTAEHVAIRSKLQYRLELAQGAV 91 (111)
T ss_dssp HHTSCSSTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCccHHHHHHHHHHHHHHHHHHH
Confidence 99999999 99999999998764
No 44
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.33 E-value=3.5e-12 Score=102.64 Aligned_cols=83 Identities=17% Similarity=0.137 Sum_probs=78.5
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+...|..+++.|+|++|+..|++++. ++|....+|.|+|.|+.++|+|++|+..+++|
T Consensus 35 ~~~~~~~lg~~~~~~g~~~eA~~~~~~al~------------------~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~a 96 (151)
T 3gyz_A 35 MMDDIYSYAYDFYNKGRIEEAEVFFRFLCI------------------YDFYNVDYIMGLAAIYQIKEQFQQAADLYAVA 96 (151)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------hCCCCHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 466789999999999999999999999999 67778889999999999999999999999999
Q ss_pred HHcCCCchHHHHHHHHHhhhh
Q 021445 291 MRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 291 l~l~p~~~Ka~~rrg~a~~~L 311 (312)
++++|+++.+|+.+|.+|..+
T Consensus 97 l~l~P~~~~~~~~lg~~~~~l 117 (151)
T 3gyz_A 97 FALGKNDYTPVFHTGQCQLRL 117 (151)
T ss_dssp HHHSSSCCHHHHHHHHHHHHT
T ss_pred HhhCCCCcHHHHHHHHHHHHc
Confidence 999999999999999999875
No 45
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.31 E-value=1.5e-11 Score=111.63 Aligned_cols=104 Identities=21% Similarity=0.316 Sum_probs=90.0
Q ss_pred hhhhhhhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHH
Q 021445 205 LSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGAL 284 (312)
Q Consensus 205 ~~~~~~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai 284 (312)
.+.....+..+...|+.+++.|+|++|+..|++||++.... .....+....+.+....+|.|+|.||+++++|++|+
T Consensus 140 ~~~~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~---~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~ 216 (336)
T 1p5q_A 140 SEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYE---SSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAI 216 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTC---CCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhcc---ccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 34445578889999999999999999999999999975432 223345566788888999999999999999999999
Q ss_pred HHHHHHHHcCCCchHHHHHHHHHhhhh
Q 021445 285 LDTEFAMRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 285 ~~~~~al~l~p~~~Ka~~rrg~a~~~L 311 (312)
.+|++||+++|+++++|+++|.+|..+
T Consensus 217 ~~~~~al~~~p~~~~a~~~lg~~~~~~ 243 (336)
T 1p5q_A 217 ESCNKALELDSNNEKGLSRRGEAHLAV 243 (336)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCcHHHHHHHHHHHHHC
Confidence 999999999999999999999999875
No 46
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.29 E-value=5.6e-12 Score=114.63 Aligned_cols=110 Identities=23% Similarity=0.321 Sum_probs=88.0
Q ss_pred CCCChhhhhhhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCH
Q 021445 201 TPNELSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDL 280 (312)
Q Consensus 201 ~~~~~~~~~~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~ 280 (312)
-....++.++.+..++..|+.+++.++|++|+..|++||.+........ ...........+...+|+|+|.||+++++|
T Consensus 168 ~~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~-~~~~~~~~~~~l~~~~~~nla~~~~~~g~~ 246 (338)
T 2if4_A 168 SDMTVEERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQ-LYGKYQDMALAVKNPCHLNIAACLIKLKRY 246 (338)
T ss_dssp TBCCHHHHHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHT-CCHHHHHHHHHHHTHHHHHHHHHHHTTTCC
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhh-hcccHHHHHHHHHHHHHHHHHHHHHHcCCH
Confidence 3455677888999999999999999999999999999999653321100 011111123344456999999999999999
Q ss_pred HHHHHHHHHHHHcCCCchHHHHHHHHHhhhh
Q 021445 281 KGALLDTEFAMRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 281 ~~Ai~~~~~al~l~p~~~Ka~~rrg~a~~~L 311 (312)
++|+.+|++||+++|+++++|+++|.+|..+
T Consensus 247 ~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~ 277 (338)
T 2if4_A 247 DEAIGHCNIVLTEEEKNPKALFRRGKAKAEL 277 (338)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 9999999999999999999999999999875
No 47
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.29 E-value=9.4e-12 Score=100.43 Aligned_cols=84 Identities=24% Similarity=0.276 Sum_probs=78.1
Q ss_pred hhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHH
Q 021445 210 NAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEF 289 (312)
Q Consensus 210 ~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~ 289 (312)
..+..+...|+.+++.|+|++|+..|+++|+ +.|....+|.|+|.||+++++|++|+.++++
T Consensus 9 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 70 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARKEYSKAIDLYTQALS------------------IAPANPIYLSNRAAAYSASGQHEKAAEDAEL 70 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------hCCcCHHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 4678899999999999999999999999999 5566678999999999999999999999999
Q ss_pred HHHcCCCchHHHHHHHHHhhhh
Q 021445 290 AMRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 290 al~l~p~~~Ka~~rrg~a~~~L 311 (312)
+++++|+++.+|+++|.+|..+
T Consensus 71 al~~~p~~~~~~~~lg~~~~~~ 92 (164)
T 3sz7_A 71 ATVVDPKYSKAWSRLGLARFDM 92 (164)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHhCCCCHHHHHHHHHHHHHc
Confidence 9999999999999999999865
No 48
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.23 E-value=2.2e-11 Score=101.41 Aligned_cols=120 Identities=22% Similarity=0.186 Sum_probs=90.0
Q ss_pred CCCCCCCCCCCCCCCCCChhhhhhhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHH
Q 021445 187 DGDSYPDWPADLDQTPNELSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQI 266 (312)
Q Consensus 187 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~ 266 (312)
....|+...+.++ .+.++..+.+..++..|+.+++.|+|++|+..|.+|+.+....+... ..............+
T Consensus 16 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~--~~~~~~~~~~~~~~~ 90 (198)
T 2fbn_A 16 NLYFQGAKKSIYD---YTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWD--DQILLDKKKNIEISC 90 (198)
T ss_dssp ------CCCSGGG---CCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCC--CHHHHHHHHHHHHHH
T ss_pred hhhhccccCchhh---CCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccc--hhhHHHHHHHHHHHH
Confidence 3444555555443 45677788899999999999999999999999999999643321000 000111233445689
Q ss_pred HhHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHHHHHhhhh
Q 021445 267 FTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 267 ~~N~a~~~~kl~~~~~Ai~~~~~al~l~p~~~Ka~~rrg~a~~~L 311 (312)
+.|+|.||+++++|++|+.+|+++++++|.+.++|+++|.+|..+
T Consensus 91 ~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~ 135 (198)
T 2fbn_A 91 NLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYF 135 (198)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHc
Confidence 999999999999999999999999999999999999999999865
No 49
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.17 E-value=8.8e-11 Score=93.80 Aligned_cols=82 Identities=6% Similarity=-0.033 Sum_probs=75.5
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
...+...|+.+++.|+|++|+..|+++|+ ++|....+|.++|.||.++|++++|+.++.+++
T Consensus 31 ~~~~~~la~~y~~~~~~~~A~~~~~~al~------------------~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al 92 (150)
T 4ga2_A 31 SIKGFYFAKLYYEAKEYDLAKKYICTYIN------------------VQERDPKAHRFLGLLYELEENTDKAVECYRRSV 92 (150)
T ss_dssp HTTHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------hCCCCHHHHHHHHHHHHHcCchHHHHHHHHHHH
Confidence 44457889999999999999999999999 667778899999999999999999999999999
Q ss_pred HcCCCchHHHHHHHHHhhhh
Q 021445 292 RDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 292 ~l~p~~~Ka~~rrg~a~~~L 311 (312)
+++|+++.+|+..|.+|..+
T Consensus 93 ~~~p~~~~~~~~la~~~~~~ 112 (150)
T 4ga2_A 93 ELNPTQKDLVLKIAELLCKN 112 (150)
T ss_dssp HHCTTCHHHHHHHHHHHHHH
T ss_pred HhCCCCHHHHHHHHHHHHHc
Confidence 99999999999999998764
No 50
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.17 E-value=8.4e-11 Score=93.81 Aligned_cols=83 Identities=13% Similarity=0.236 Sum_probs=76.9
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+...|..+++.|+|++|+..|++++. +.|....++.++|.|+.++|+|++|+..++++
T Consensus 20 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 81 (148)
T 2vgx_A 20 TLEQLYSLAFNQYQSGXYEDAHXVFQALCV------------------LDHYDSRFFLGLGACRQAMGQYDLAIHSYSYG 81 (148)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCChHHHHHHHHHHHH------------------cCcccHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 456688999999999999999999999999 56667889999999999999999999999999
Q ss_pred HHcCCCchHHHHHHHHHhhhh
Q 021445 291 MRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 291 l~l~p~~~Ka~~rrg~a~~~L 311 (312)
+.++|+++.+|+.+|.+|..+
T Consensus 82 l~l~p~~~~~~~~lg~~~~~~ 102 (148)
T 2vgx_A 82 AVMDIXEPRFPFHAAECLLQX 102 (148)
T ss_dssp HHHSTTCTHHHHHHHHHHHHT
T ss_pred HhcCCCCchHHHHHHHHHHHc
Confidence 999999999999999999765
No 51
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.16 E-value=1.1e-10 Score=90.45 Aligned_cols=83 Identities=27% Similarity=0.355 Sum_probs=76.9
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+...|..+++.|+|++|+..|++++. +.|....++.|+|.|++++++|++|+.++.++
T Consensus 8 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~------------------~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a 69 (137)
T 3q49_B 8 SAQELKEQGNRLFVGRKYPEAAACYGRAIT------------------RNPLVAVYYTNRALCYLKMQQPEQALADCRRA 69 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcHHHHHHHHHHHHh------------------hCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 467789999999999999999999999999 44556779999999999999999999999999
Q ss_pred HHcCCCchHHHHHHHHHhhhh
Q 021445 291 MRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 291 l~l~p~~~Ka~~rrg~a~~~L 311 (312)
++++|.++.+|+.+|.++..+
T Consensus 70 l~~~p~~~~~~~~l~~~~~~~ 90 (137)
T 3q49_B 70 LELDGQSVKAHFFLGQCQLEM 90 (137)
T ss_dssp HHHCTTCHHHHHHHHHHHHHT
T ss_pred HHhCchhHHHHHHHHHHHHHH
Confidence 999999999999999999765
No 52
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.14 E-value=1.2e-10 Score=90.41 Aligned_cols=79 Identities=15% Similarity=0.064 Sum_probs=73.6
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+...|..+++.|+|++|+..|++||+ ++|....+|.|+|.|+.++|+|++|++++.++|
T Consensus 47 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~------------------~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al 108 (126)
T 4gco_A 47 AILYSNRAACLTKLMEFQRALDDCDTCIR------------------LDSKFIKGYIRKAACLVAMREWSKAQRAYEDAL 108 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHhhccHHHHHHHHHHHHH------------------hhhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 45678899999999999999999999999 667778899999999999999999999999999
Q ss_pred HcCCCchHHHHHHHHHh
Q 021445 292 RDGDDNVKALFRQGQVS 308 (312)
Q Consensus 292 ~l~p~~~Ka~~rrg~a~ 308 (312)
+++|++..++...+.|+
T Consensus 109 ~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 109 QVDPSNEEAREGVRNCL 125 (126)
T ss_dssp HHCTTCHHHHHHHHHHC
T ss_pred HHCcCCHHHHHHHHHhc
Confidence 99999999999988875
No 53
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.14 E-value=1.5e-10 Score=91.27 Aligned_cols=83 Identities=16% Similarity=0.288 Sum_probs=76.9
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+...|..+++.|+|++|+..|++++. ..|....+|.++|.|+.++|+|++|+..++++
T Consensus 17 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 78 (142)
T 2xcb_A 17 TLEQLYALGFNQYQAGKWDDAQKIFQALCM------------------LDHYDARYFLGLGACRQSLGLYEQALQSYSYG 78 (142)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHHHHH------------------hCCccHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 456688999999999999999999999999 56667889999999999999999999999999
Q ss_pred HHcCCCchHHHHHHHHHhhhh
Q 021445 291 MRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 291 l~l~p~~~Ka~~rrg~a~~~L 311 (312)
+.++|+++.+++.+|.+|..+
T Consensus 79 l~~~p~~~~~~~~lg~~~~~~ 99 (142)
T 2xcb_A 79 ALMDINEPRFPFHAAECHLQL 99 (142)
T ss_dssp HHHCTTCTHHHHHHHHHHHHT
T ss_pred HhcCCCCcHHHHHHHHHHHHc
Confidence 999999999999999999765
No 54
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.12 E-value=2.2e-10 Score=88.06 Aligned_cols=81 Identities=6% Similarity=-0.063 Sum_probs=75.6
Q ss_pred hhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHH
Q 021445 213 DSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMR 292 (312)
Q Consensus 213 ~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~ 292 (312)
..+...|..+++.|+|++|+..|.++++ +.|....++.++|.++.++|++++|+..+.+|++
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~------------------~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~ 79 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQ------------------KEPEREEAWRSLGLTQAENEKDGLAIIALNHARM 79 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHH------------------HCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4578899999999999999999999999 6677788999999999999999999999999999
Q ss_pred cCCCchHHHHHHHHHhhhh
Q 021445 293 DGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 293 l~p~~~Ka~~rrg~a~~~L 311 (312)
++|++..+++.+|.+|..+
T Consensus 80 l~P~~~~~~~~la~~~~~~ 98 (121)
T 1hxi_A 80 LDPKDIAVHAALAVSHTNE 98 (121)
T ss_dssp HCTTCHHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHc
Confidence 9999999999999998754
No 55
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.10 E-value=1.5e-10 Score=102.24 Aligned_cols=83 Identities=27% Similarity=0.355 Sum_probs=77.0
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..++..|+.+++.|+|++|+..|++|+. +.|....+|.|+|.||+++|+|++|+.++++|
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~a 64 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAIT------------------RNPLVAVYYTNRALCYLKMQQPEQALADCRRA 64 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------hCCccHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 356789999999999999999999999999 45556789999999999999999999999999
Q ss_pred HHcCCCchHHHHHHHHHhhhh
Q 021445 291 MRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 291 l~l~p~~~Ka~~rrg~a~~~L 311 (312)
++++|++.++++++|.+|..+
T Consensus 65 l~~~p~~~~~~~~lg~~~~~~ 85 (281)
T 2c2l_A 65 LELDGQSVKAHFFLGQCQLEM 85 (281)
T ss_dssp TTSCTTCHHHHHHHHHHHHHT
T ss_pred HHhCCCCHHHHHHHHHHHHHc
Confidence 999999999999999999865
No 56
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.10 E-value=4e-10 Score=80.71 Aligned_cols=83 Identities=25% Similarity=0.315 Sum_probs=74.9
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+...|..+++.++|++|+..|.++++ +.|....++.++|.++.+++++++|+..+.++
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~------------------~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a 69 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALE------------------LDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKA 69 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHh------------------cCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 356678899999999999999999999998 33445668999999999999999999999999
Q ss_pred HHcCCCchHHHHHHHHHhhhh
Q 021445 291 MRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 291 l~l~p~~~Ka~~rrg~a~~~L 311 (312)
++++|.+..+++.+|.++..+
T Consensus 70 ~~~~p~~~~~~~~l~~~~~~~ 90 (91)
T 1na3_A 70 LELDPNNAEAKQNLGNAKQKQ 90 (91)
T ss_dssp HHHCTTCHHHHHHHHHHHHHH
T ss_pred HhcCCCCHHHHHHHHHHHHhc
Confidence 999999999999999998764
No 57
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.05 E-value=7.5e-10 Score=82.50 Aligned_cols=84 Identities=25% Similarity=0.257 Sum_probs=71.2
Q ss_pred hhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHH
Q 021445 210 NAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEF 289 (312)
Q Consensus 210 ~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~ 289 (312)
+.+..+...|..++..|+|++|+..|.+++. ..|....++.++|.+++++++|++|+..+.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~------------------~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~ 63 (118)
T 1elw_A 2 EQVNELKEKGNKALSVGNIDDALQCYSEAIK------------------LDPHNHVLYSNRSAAYAKKGDYQKAYEDGCK 63 (118)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHcccHHHHHHHHHHHHH------------------HCCCcHHHHHHHHHHHHhhccHHHHHHHHHH
Confidence 3567788999999999999999999999998 3344466888899999999999999999999
Q ss_pred HHHcCCCchHHHHHHHHHhhhh
Q 021445 290 AMRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 290 al~l~p~~~Ka~~rrg~a~~~L 311 (312)
+++++|.+..+++.+|.++..+
T Consensus 64 ~~~~~~~~~~~~~~~a~~~~~~ 85 (118)
T 1elw_A 64 TVDLKPDWGKGYSRKAAALEFL 85 (118)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHhCcccHHHHHHHHHHHHHH
Confidence 9999999999999988888654
No 58
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.04 E-value=8.7e-10 Score=87.73 Aligned_cols=89 Identities=21% Similarity=0.312 Sum_probs=77.3
Q ss_pred hhhhhhhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHH
Q 021445 205 LSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGAL 284 (312)
Q Consensus 205 ~~~~~~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai 284 (312)
.....+.+..+...|..++..|+|++|+..|.+++. ..|....++.++|.|+.++++|++|+
T Consensus 6 ~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~------------------~~~~~~~~~~~~a~~~~~~~~~~~A~ 67 (166)
T 1a17_A 6 ADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIE------------------LNPSNAIYYGNRSLAYLRTECYGYAL 67 (166)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HSTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH------------------hCCCChHHHHHHHHHHHHcCCHHHHH
Confidence 345667889999999999999999999999999999 34445678889999999999999999
Q ss_pred HHHHHHHHcCCCchHHHHHHHHHhhhh
Q 021445 285 LDTEFAMRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 285 ~~~~~al~l~p~~~Ka~~rrg~a~~~L 311 (312)
..+.++++++|.+..+|+.+|.++..+
T Consensus 68 ~~~~~a~~~~~~~~~~~~~~a~~~~~~ 94 (166)
T 1a17_A 68 GDATRAIELDKKYIKGYYRRAASNMAL 94 (166)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCcccHHHHHHHHHHHHHh
Confidence 999999999999999999999888764
No 59
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.03 E-value=1.3e-09 Score=91.64 Aligned_cols=83 Identities=13% Similarity=0.128 Sum_probs=63.4
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhH----------------HHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTN----------------SSACK 274 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N----------------~a~~~ 274 (312)
.+..+..+|..++..|+|++|+..|+++++ +.|....++.+ +|.+|
T Consensus 3 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~ 64 (208)
T 3urz_A 3 SVDEMLQKVSAAIEAGQNGQAVSYFRQTIA------------------LNIDRTEMYYWTNVDKNSEISSKLATELALAY 64 (208)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHH------------------hCCCChHHHHHhhhcchhhhhHHHHHHHHHHH
Confidence 456788999999999999999999999998 44444555555 77777
Q ss_pred HHcCCHHHHHHHHHHHHHcCCCchHHHHHHHHHhhhh
Q 021445 275 LKLGDLKGALLDTEFAMRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 275 ~kl~~~~~Ai~~~~~al~l~p~~~Ka~~rrg~a~~~L 311 (312)
.++|+|++|+..++++|+++|+++.+|+.+|.+|..+
T Consensus 65 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~ 101 (208)
T 3urz_A 65 KKNRNYDKAYLFYKELLQKAPNNVDCLEACAEMQVCR 101 (208)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHc
Confidence 7777777777777777777777777777777776543
No 60
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.01 E-value=1.4e-09 Score=84.77 Aligned_cols=86 Identities=33% Similarity=0.448 Sum_probs=75.8
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+...|..++..|+|++|+..|+++++... -.+....++.++|.|++++++|++|+..++++
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~---------------~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~ 91 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGLDA---------------TPQDQAVLHRNRAACHLKLEDYDKAETEASKA 91 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCC---------------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcc---------------cchHHHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 567789999999999999999999999998311 01334779999999999999999999999999
Q ss_pred HHcCCCchHHHHHHHHHhhhh
Q 021445 291 MRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 291 l~l~p~~~Ka~~rrg~a~~~L 311 (312)
++++|.+..+|+.+|.++..+
T Consensus 92 ~~~~~~~~~~~~~~a~~~~~~ 112 (148)
T 2dba_A 92 IEKDGGDVKALYRRSQALEKL 112 (148)
T ss_dssp HHHTSCCHHHHHHHHHHHHHH
T ss_pred HhhCccCHHHHHHHHHHHHHc
Confidence 999999999999999998765
No 61
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.97 E-value=1.8e-09 Score=78.97 Aligned_cols=76 Identities=17% Similarity=0.059 Sum_probs=66.6
Q ss_pred hHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHH-HHhHHHHHHHHcCCHHHHHHHHHHHHHc
Q 021445 215 IKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQ-IFTNSSACKLKLGDLKGALLDTEFAMRD 293 (312)
Q Consensus 215 ~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~N~a~~~~kl~~~~~Ai~~~~~al~l 293 (312)
..++|..+++.|+|++|+..|+++++ ..|.... ++.++|.|++++|++++|+..+.+++++
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~------------------~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 64 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQ------------------TEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIEL 64 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHH------------------HCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH------------------HCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 45789999999999999999999999 4455566 9999999999999999999999999999
Q ss_pred CCCchHHH--HHHHHHh
Q 021445 294 GDDNVKAL--FRQGQVS 308 (312)
Q Consensus 294 ~p~~~Ka~--~rrg~a~ 308 (312)
+|++..++ ...+.++
T Consensus 65 ~p~~~~~~~~~~~~~a~ 81 (99)
T 2kc7_A 65 NPDSPALQARKMVMDIL 81 (99)
T ss_dssp CTTSTHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHH
Confidence 99999988 4444444
No 62
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.97 E-value=1.5e-09 Score=80.19 Aligned_cols=82 Identities=12% Similarity=0.167 Sum_probs=73.7
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+...|..++..|+|++|+..|.++++. .+....++.++|.++.++++|++|+..+++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~------------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~ 67 (112)
T 2kck_A 6 PEEYYLEGVLQYDAGNYTESIDLFEKAIQL------------------DPEESKYWLMKGKALYNLERYEEAVDCYNYVI 67 (112)
T ss_dssp TTGGGGHHHHHHSSCCHHHHHHHHHHHHHH------------------CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHh------------------CcCCHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 445778999999999999999999999993 33345688999999999999999999999999
Q ss_pred HcCCC--chHHHHHHHHHhhhh
Q 021445 292 RDGDD--NVKALFRQGQVSIIL 311 (312)
Q Consensus 292 ~l~p~--~~Ka~~rrg~a~~~L 311 (312)
+++|. +..+++.+|.++..+
T Consensus 68 ~~~~~~~~~~~~~~l~~~~~~~ 89 (112)
T 2kck_A 68 NVIEDEYNKDVWAAKADALRYI 89 (112)
T ss_dssp HTSCCTTCHHHHHHHHHHHTTC
T ss_pred HhCcccchHHHHHHHHHHHHHH
Confidence 99999 999999999999765
No 63
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=98.96 E-value=1.8e-09 Score=90.78 Aligned_cols=76 Identities=18% Similarity=0.159 Sum_probs=71.5
Q ss_pred hhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Q 021445 217 VFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDD 296 (312)
Q Consensus 217 ~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l~p~ 296 (312)
+.|..+++.|+|++|+..|+++|+ +.|....++.++|.+++++|++++|+..++++|+++|+
T Consensus 59 ~lg~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~ 120 (208)
T 3urz_A 59 ELALAYKKNRNYDKAYLFYKELLQ------------------KAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEAD 120 (208)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHH------------------HCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Confidence 389999999999999999999999 66777889999999999999999999999999999999
Q ss_pred chHHHHHHHHHhhh
Q 021445 297 NVKALFRQGQVSII 310 (312)
Q Consensus 297 ~~Ka~~rrg~a~~~ 310 (312)
++.+|+.+|.+|+.
T Consensus 121 ~~~a~~~lg~~~~~ 134 (208)
T 3urz_A 121 NLAANIFLGNYYYL 134 (208)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 99999999998853
No 64
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.95 E-value=1.2e-09 Score=83.40 Aligned_cols=82 Identities=26% Similarity=0.375 Sum_probs=56.5
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+...|..++..|+|++|+..|.++++. .+....++.++|.++.+++++++|+..++++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~------------------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a 76 (133)
T 2lni_A 15 LALMVKNKGNECFQKGDYPQAMKHYTEAIKR------------------NPKDAKLYSNRAACYTKLLEFQLALKDCEEC 76 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSHHHHHHHHHHHTT------------------CTTCHHHHHHHHHHHTTTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc------------------CCCcHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 5667888999999999999999999999873 2222445566666666666666666666666
Q ss_pred HHcCCCchHHHHHHHHHhhh
Q 021445 291 MRDGDDNVKALFRQGQVSII 310 (312)
Q Consensus 291 l~l~p~~~Ka~~rrg~a~~~ 310 (312)
++++|.+..+++.+|.++..
T Consensus 77 ~~~~~~~~~~~~~la~~~~~ 96 (133)
T 2lni_A 77 IQLEPTFIKGYTRKAAALEA 96 (133)
T ss_dssp HHHCTTCHHHHHHHHHHHHH
T ss_pred HHhCCCchHHHHHHHHHHHH
Confidence 66666666666666666554
No 65
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=98.93 E-value=1.4e-09 Score=86.70 Aligned_cols=76 Identities=12% Similarity=-0.076 Sum_probs=68.3
Q ss_pred hhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHcCCCc
Q 021445 218 FGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDN 297 (312)
Q Consensus 218 ~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l~p~~ 297 (312)
.|..+..+|++++|+..|++++. ..|.....+.++|.+|+++|+|++|++.++++|+++|++
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~------------------~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~ 64 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTP------------------SPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERD 64 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSC------------------SHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred hHHHHHHcChHHHHHHHHHHhcc------------------cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 46777889999999999999999 678888899999999999999999999999999999999
Q ss_pred hHHHHHHHHHhhhh
Q 021445 298 VKALFRQGQVSIIL 311 (312)
Q Consensus 298 ~Ka~~rrg~a~~~L 311 (312)
+.+|+.+|.+|..+
T Consensus 65 ~~a~~~lg~~~~~~ 78 (150)
T 4ga2_A 65 PKAHRFLGLLYELE 78 (150)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHc
Confidence 99999999999865
No 66
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.92 E-value=1.7e-09 Score=107.78 Aligned_cols=100 Identities=18% Similarity=0.148 Sum_probs=51.0
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccc---------cCCCCch-------hhhHHHHHHHHHHhHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWE---------KEGIDEG-------KSSSLRKTKSQIFTNSSACK 274 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~---------~~~~~~~-------~~~~~~~~~~~~~~N~a~~~ 274 (312)
.++.+.+.|+.+.++|+|++|+..|++||++-..... .....-+ ....++|....+|.|+|.++
T Consensus 8 ~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l 87 (723)
T 4gyw_A 8 HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTL 87 (723)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 4556667777777777777777777777762100000 0000000 00113444455555555555
Q ss_pred HHcCCHHHHHHHHHHHHHcCCCchHHHHHHHHHhhh
Q 021445 275 LKLGDLKGALLDTEFAMRDGDDNVKALFRQGQVSII 310 (312)
Q Consensus 275 ~kl~~~~~Ai~~~~~al~l~p~~~Ka~~rrg~a~~~ 310 (312)
.++|++++|++.+++||+++|+++.+|+.+|.+|..
T Consensus 88 ~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~ 123 (723)
T 4gyw_A 88 KEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKD 123 (723)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 555555555555555555555555555555555543
No 67
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.92 E-value=5.4e-09 Score=79.10 Aligned_cols=84 Identities=29% Similarity=0.337 Sum_probs=54.6
Q ss_pred hhhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHH
Q 021445 209 MNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTE 288 (312)
Q Consensus 209 ~~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~ 288 (312)
...+..+...|..++..++|++|+..|.+++.. .|....++.++|.++.+++++++|+..+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~------------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~ 70 (131)
T 2vyi_A 9 SAEAERLKTEGNEQMKVENFEAAVHFYGKAIEL------------------NPANAVYFCNRAAAYSKLGNYAGAVQDCE 70 (131)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHc------------------CCCCHHHHHHHHHHHHHhhchHHHHHHHH
Confidence 345667788888888888888888888888873 22224455566666666666666666666
Q ss_pred HHHHcCCCchHHHHHHHHHhhh
Q 021445 289 FAMRDGDDNVKALFRQGQVSII 310 (312)
Q Consensus 289 ~al~l~p~~~Ka~~rrg~a~~~ 310 (312)
++++++|.+..+++.+|.++..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~ 92 (131)
T 2vyi_A 71 RAICIDPAYSKAYGRMGLALSS 92 (131)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHhcCccCHHHHHHHHHHHHH
Confidence 6666666666666666655543
No 68
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=98.92 E-value=3.1e-09 Score=89.87 Aligned_cols=81 Identities=19% Similarity=0.263 Sum_probs=72.9
Q ss_pred hhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHH-HHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 213 DSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRK-TKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 213 ~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
..+...|..+++.|+|++|+..|+++++. .| ....++.|+|.|+.++|+|++|+.++.+++
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~------------------~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al 69 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKL------------------TNNQDSVTAYNCGVCADNIKKYKEAADYFDIAI 69 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH------------------TTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhc------------------cCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHH
Confidence 56889999999999999999999999994 22 334688889999999999999999999999
Q ss_pred HcCCCchHHHHHHHHHhhhh
Q 021445 292 RDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 292 ~l~p~~~Ka~~rrg~a~~~L 311 (312)
+++|.+..+|+.+|.+|..+
T Consensus 70 ~~~p~~~~~~~~l~~~~~~~ 89 (228)
T 4i17_A 70 KKNYNLANAYIGKSAAYRDM 89 (228)
T ss_dssp HTTCSHHHHHHHHHHHHHHT
T ss_pred HhCcchHHHHHHHHHHHHHc
Confidence 99999999999999999765
No 69
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.91 E-value=1.4e-09 Score=103.53 Aligned_cols=84 Identities=23% Similarity=0.352 Sum_probs=73.2
Q ss_pred hhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHH
Q 021445 210 NAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEF 289 (312)
Q Consensus 210 ~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~ 289 (312)
+.+..+...|+.+++.|+|++|+..|++|++ +.|....+|.|+|.||+++++|++|++++++
T Consensus 4 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~------------------~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 65 (477)
T 1wao_1 4 KRAEELKTQANDYFKAKDYENAIKFYSQAIE------------------LNPSNAIYYGNRSLAYLRTECYGYALGDATR 65 (477)
T ss_dssp HHHTTSSSSSSSTTTTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH------------------hCCccHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 4577788899999999999999999999998 4555677899999999999999999999999
Q ss_pred HHHcCCCchHHHHHHHHHhhhh
Q 021445 290 AMRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 290 al~l~p~~~Ka~~rrg~a~~~L 311 (312)
|++++|.++++|+++|.+|..+
T Consensus 66 al~l~p~~~~~~~~lg~~~~~~ 87 (477)
T 1wao_1 66 AIELDKKYIKGYYRRAASNMAL 87 (477)
T ss_dssp HHHSCTTCHHHHHHHHHHHHHH
T ss_pred HHHhCCCCHHHHHHHHHHHHHc
Confidence 9999999999999999988765
No 70
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.91 E-value=2e-09 Score=81.76 Aligned_cols=70 Identities=14% Similarity=0.012 Sum_probs=61.2
Q ss_pred hhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHH---HHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHH
Q 021445 224 KKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSL---RKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKA 300 (312)
Q Consensus 224 ~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l~p~~~Ka 300 (312)
..|+|++|+..|++||+ + .|....++.|+|.||+++|+|++|+..+.++++++|+++.+
T Consensus 2 ~~g~~~~A~~~~~~al~------------------~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 63 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIA------------------SGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQAL 63 (117)
T ss_dssp -----CCCHHHHHHHHS------------------SCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred CCCcHHHHHHHHHHHHH------------------cCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHH
Confidence 35889999999999999 4 57788899999999999999999999999999999999999
Q ss_pred HHHHHHHhhhh
Q 021445 301 LFRQGQVSIIL 311 (312)
Q Consensus 301 ~~rrg~a~~~L 311 (312)
++.+|.++..+
T Consensus 64 ~~~l~~~~~~~ 74 (117)
T 3k9i_A 64 RVFYAMVLYNL 74 (117)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHc
Confidence 99999999765
No 71
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.89 E-value=4.1e-09 Score=80.49 Aligned_cols=84 Identities=8% Similarity=-0.057 Sum_probs=71.0
Q ss_pred hhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHH
Q 021445 213 DSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMR 292 (312)
Q Consensus 213 ~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~ 292 (312)
..+...|..+++.|+|++|+..|.++++.... .+....++.++|.|++++|+|++|+..+.++++
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~---------------~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~ 67 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLELYPN---------------GVYTPNALYWLGESYYATRNFQLAEAQFRDLVS 67 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS---------------STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCC---------------CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 45678899999999999999999999983211 112236889999999999999999999999999
Q ss_pred cCCCc---hHHHHHHHHHhhhh
Q 021445 293 DGDDN---VKALFRQGQVSIIL 311 (312)
Q Consensus 293 l~p~~---~Ka~~rrg~a~~~L 311 (312)
.+|++ +.+++.+|.++..+
T Consensus 68 ~~p~~~~~~~~~~~la~~~~~~ 89 (129)
T 2xev_A 68 RYPTHDKAAGGLLKLGLSQYGE 89 (129)
T ss_dssp HCTTSTTHHHHHHHHHHHHHHT
T ss_pred HCCCCcccHHHHHHHHHHHHHc
Confidence 99999 88999999998764
No 72
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=98.89 E-value=3.2e-09 Score=85.34 Aligned_cols=80 Identities=11% Similarity=0.061 Sum_probs=73.2
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+...|..+++.|+|++|+..|+++|+ +.|....+|.|+|.||.++|+|++|+.++.+++
T Consensus 45 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 106 (164)
T 3sz7_A 45 PIYLSNRAAAYSASGQHEKAAEDAELATV------------------VDPKYSKAWSRLGLARFDMADYKGAKEAYEKGI 106 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHH------------------hCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 45578899999999999999999999999 556668899999999999999999999999999
Q ss_pred HcCCCchHHHHHHHHHhh
Q 021445 292 RDGDDNVKALFRQGQVSI 309 (312)
Q Consensus 292 ~l~p~~~Ka~~rrg~a~~ 309 (312)
+++|++..+|++++.+..
T Consensus 107 ~~~p~~~~~~~~~~l~~~ 124 (164)
T 3sz7_A 107 EAEGNGGSDAMKRGLETT 124 (164)
T ss_dssp HHHSSSCCHHHHHHHHHH
T ss_pred HhCCCchHHHHHHHHHHH
Confidence 999999999999988754
No 73
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.88 E-value=3.4e-09 Score=80.40 Aligned_cols=83 Identities=31% Similarity=0.362 Sum_probs=74.6
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+...|..++..|+|++|+..|.+++.. .|....++.++|.++.++++|++|+..+.++
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~------------------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~ 64 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKEL------------------DPTNMTYITNQAAVYFEKGDYNKCRELCEKA 64 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc------------------CCccHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 4667889999999999999999999999993 3444678999999999999999999999999
Q ss_pred HHcCCCc-------hHHHHHHHHHhhhh
Q 021445 291 MRDGDDN-------VKALFRQGQVSIIL 311 (312)
Q Consensus 291 l~l~p~~-------~Ka~~rrg~a~~~L 311 (312)
+.++|.+ ..+++.+|.++..+
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~la~~~~~~ 92 (131)
T 1elr_A 65 IEVGRENREDYRQIAKAYARIGNSYFKE 92 (131)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHHHHHT
T ss_pred HhhccccchhHHHHHHHHHHHHHHHHHh
Confidence 9999887 99999999998765
No 74
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=98.87 E-value=4e-09 Score=84.58 Aligned_cols=79 Identities=22% Similarity=0.198 Sum_probs=70.1
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+...|..+++.|+|++|+..|++|+. ++|....+|.|+|.||.++|++++|+..+++|+
T Consensus 70 ~~~~~~lg~~~~~~g~~~~Ai~~~~~al~------------------l~P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al 131 (151)
T 3gyz_A 70 VDYIMGLAAIYQIKEQFQQAADLYAVAFA------------------LGKNDYTPVFHTGQCQLRLKAPLKAKECFELVI 131 (151)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HSSSCCHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHh------------------hCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 45578899999999999999999999999 667777899999999999999999999999999
Q ss_pred HcCCCchHHHHHHHHHhhh
Q 021445 292 RDGDDNVKALFRQGQVSII 310 (312)
Q Consensus 292 ~l~p~~~Ka~~rrg~a~~~ 310 (312)
++.|+.. +-.+++.++.
T Consensus 132 ~l~~~~~--~~~~A~~ll~ 148 (151)
T 3gyz_A 132 QHSNDEK--LKIKAQSYLD 148 (151)
T ss_dssp HHCCCHH--HHHHHHHHHH
T ss_pred HhCCCHH--HHHHHHHHHH
Confidence 9999875 6667776653
No 75
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=98.86 E-value=7.7e-09 Score=84.24 Aligned_cols=82 Identities=15% Similarity=0.229 Sum_probs=69.6
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+.+.|+.+++.|+|++|+..|++||+ ++|....++.++|.||.+++++++|+..+.++
T Consensus 4 ~~~iy~~lG~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~ 65 (184)
T 3vtx_A 4 TTTIYMDIGDKKRTKGDFDGAIRAYKKVLK------------------ADPNNVETLLKLGKTYMDIGLPNDAIESLKKF 65 (184)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------hCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 456678999999999999999999999999 55666778888888888888888888888888
Q ss_pred HHcCCCchHHHHHHHHHhhh
Q 021445 291 MRDGDDNVKALFRQGQVSII 310 (312)
Q Consensus 291 l~l~p~~~Ka~~rrg~a~~~ 310 (312)
+..+|.+..+++..|.++..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~ 85 (184)
T 3vtx_A 66 VVLDTTSAEAYYILGSANFM 85 (184)
T ss_dssp HHHCCCCHHHHHHHHHHHHH
T ss_pred HhcCchhHHHHHHHHHHHHH
Confidence 88888888888888777654
No 76
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=98.86 E-value=4.4e-09 Score=88.94 Aligned_cols=83 Identities=18% Similarity=0.201 Sum_probs=76.7
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+...|..+++.|+|++|+..|+++|+ ++|....++.++|.++.++|++++|+..++++
T Consensus 4 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~a 65 (217)
T 2pl2_A 4 AEQNPLRLGVQLYALGRYDAALTLFERALK------------------ENPQDPEALYWLARTQLKLGLVNPALENGKTL 65 (217)
T ss_dssp CCHHHHHHHHHHHHTTCHHHHHHHHHHHHT------------------TSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 355678999999999999999999999999 56667889999999999999999999999999
Q ss_pred HHcCCCchHHHHHHHHHhhhh
Q 021445 291 MRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 291 l~l~p~~~Ka~~rrg~a~~~L 311 (312)
++++|+++.+++.+|.++..+
T Consensus 66 l~~~P~~~~a~~~lg~~~~~~ 86 (217)
T 2pl2_A 66 VARTPRYLGGYMVLSEAYVAL 86 (217)
T ss_dssp HHHCTTCHHHHHHHHHHHHHH
T ss_pred HHhCCCcHHHHHHHHHHHHHh
Confidence 999999999999999998764
No 77
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=98.86 E-value=5.8e-09 Score=79.76 Aligned_cols=83 Identities=10% Similarity=0.017 Sum_probs=75.3
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+...|..+++.|+|++|+..|+++++ +.|....+|.++|.|+.++|++++|+.++.+++
T Consensus 38 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~------------------~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al 99 (126)
T 3upv_A 38 ARGYSNRAAALAKLMSFPEAIADCNKAIE------------------KDPNFVRAYIRKATAQIAVKEYASALETLDAAR 99 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHH------------------hCCCcHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 45678899999999999999999999999 556667899999999999999999999999999
Q ss_pred HcC------CCchHHHHHHHHHhhhhC
Q 021445 292 RDG------DDNVKALFRQGQVSIILL 312 (312)
Q Consensus 292 ~l~------p~~~Ka~~rrg~a~~~L~ 312 (312)
+++ |.+..++...+.+...++
T Consensus 100 ~~~p~~~~~p~~~~~~~~l~~~~~~l~ 126 (126)
T 3upv_A 100 TKDAEVNNGSSAREIDQLYYKASQQRF 126 (126)
T ss_dssp HHHHHHHTTTTHHHHHHHHHHHHHHC-
T ss_pred HhCcccCCchhHHHHHHHHHHHHHhhC
Confidence 999 999999999998887663
No 78
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.84 E-value=2.7e-09 Score=85.80 Aligned_cols=73 Identities=12% Similarity=0.097 Sum_probs=66.7
Q ss_pred hHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCH----------HHHHHHHHHH
Q 021445 221 EHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDL----------KGALLDTEFA 290 (312)
Q Consensus 221 ~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~----------~~Ai~~~~~a 290 (312)
..-+.+.|++|+..|.+|++ ++|....+|.|++.|+++++++ ++|+..+++|
T Consensus 11 ~~~r~~~feeA~~~~~~Ai~------------------l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~A 72 (158)
T 1zu2_A 11 EFDRILLFEQIRQDAENTYK------------------SNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEA 72 (158)
T ss_dssp SHHHHHHHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHH------------------HCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHH
Confidence 45567899999999999999 7888899999999999999875 5999999999
Q ss_pred HHcCCCchHHHHHHHHHhhhh
Q 021445 291 MRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 291 l~l~p~~~Ka~~rrg~a~~~L 311 (312)
|+++|++..|||.+|.||..+
T Consensus 73 L~ldP~~~~A~~~LG~ay~~l 93 (158)
T 1zu2_A 73 LLIDPKKDEAVWCIGNAYTSF 93 (158)
T ss_dssp HHHCTTCHHHHHHHHHHHHHH
T ss_pred HHhCcCcHHHHHHHHHHHHHh
Confidence 999999999999999999864
No 79
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=98.83 E-value=1e-08 Score=94.80 Aligned_cols=81 Identities=11% Similarity=0.090 Sum_probs=44.2
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCC-HHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGD-LKGALLDTEF 289 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~-~~~Ai~~~~~ 289 (312)
.+..+...|..+.+.|+|++|+..|++||. ++|....+|.||+.++.++|+ +++|+.++++
T Consensus 96 ~~~a~~~lg~~~~~~g~~~~Al~~~~~al~------------------l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~ 157 (382)
T 2h6f_A 96 FRDVYDYFRAVLQRDERSERAFKLTRDAIE------------------LNAANYTVWHFRRVLLKSLQKDLHEEMNYITA 157 (382)
T ss_dssp HHHHHHHHHHHHHHTCCCHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHCCChHHHHHHHHHHHH------------------hCccCHHHHHHHHHHHHHcccCHHHHHHHHHH
Confidence 344455666666666666666666666666 344444445555555555553 5555555555
Q ss_pred HHHcCCCchHHHHHHHHHhh
Q 021445 290 AMRDGDDNVKALFRQGQVSI 309 (312)
Q Consensus 290 al~l~p~~~Ka~~rrg~a~~ 309 (312)
||+++|++..+|+.+|.+|.
T Consensus 158 al~l~P~~~~a~~~~g~~~~ 177 (382)
T 2h6f_A 158 IIEEQPKNYQVWHHRRVLVE 177 (382)
T ss_dssp HHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHCCCCHHHHHHHHHHHH
Confidence 55555555555555554444
No 80
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=98.83 E-value=4e-09 Score=97.46 Aligned_cols=81 Identities=10% Similarity=-0.077 Sum_probs=52.6
Q ss_pred hhhhHhhhhhHHhhhc-HHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQD-YKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~-y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
+..+..+|..+.+.|+ |++|+..|++||+ ++|....+|.||+.++.++|+|++|+.++++|
T Consensus 131 ~~a~~~~g~~l~~~g~d~~eAl~~~~~al~------------------l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~ka 192 (382)
T 2h6f_A 131 YTVWHFRRVLLKSLQKDLHEEMNYITAIIE------------------EQPKNYQVWHHRRVLVEWLRDPSQELEFIADI 192 (382)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCHHHHHHHHHHHHH------------------HCCCCHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 4557889999999997 9999999999998 34444445555555555555555555555555
Q ss_pred HHcCCCchHHHHHHHHHhhh
Q 021445 291 MRDGDDNVKALFRQGQVSII 310 (312)
Q Consensus 291 l~l~p~~~Ka~~rrg~a~~~ 310 (312)
|+++|++..+|+.+|.++..
T Consensus 193 l~ldP~~~~a~~~lg~~~~~ 212 (382)
T 2h6f_A 193 LNQDAKNYHAWQHRQWVIQE 212 (382)
T ss_dssp HHHCTTCHHHHHHHHHHHHH
T ss_pred HHhCccCHHHHHHHHHHHHH
Confidence 55555555555555555443
No 81
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.83 E-value=6.7e-09 Score=103.57 Aligned_cols=99 Identities=15% Similarity=0.144 Sum_probs=69.5
Q ss_pred hhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccc---------cCCCCch-------hhhHHHHHHHHHHhHHHHHHHH
Q 021445 213 DSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWE---------KEGIDEG-------KSSSLRKTKSQIFTNSSACKLK 276 (312)
Q Consensus 213 ~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~---------~~~~~~~-------~~~~~~~~~~~~~~N~a~~~~k 276 (312)
..+.+.|+.+.+.|+|++|+..|++||++-..... ....+-+ ...+++|....+|.|+|.+|.+
T Consensus 44 ~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~ 123 (723)
T 4gyw_A 44 AAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKD 123 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 34455666666666666666666666653111000 0000001 1112677788999999999999
Q ss_pred cCCHHHHHHHHHHHHHcCCCchHHHHHHHHHhhhh
Q 021445 277 LGDLKGALLDTEFAMRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 277 l~~~~~Ai~~~~~al~l~p~~~Ka~~rrg~a~~~L 311 (312)
+|++++|++.+++||+++|+++.+|+.+|.+|..+
T Consensus 124 ~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~ 158 (723)
T 4gyw_A 124 SGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIV 158 (723)
T ss_dssp TTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhc
Confidence 99999999999999999999999999999999865
No 82
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=98.82 E-value=8.1e-09 Score=97.04 Aligned_cols=85 Identities=26% Similarity=0.363 Sum_probs=77.6
Q ss_pred hhhhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHH
Q 021445 208 WMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDT 287 (312)
Q Consensus 208 ~~~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~ 287 (312)
..+.+..++..|+.+++.|+|++|+..|++++.. .| ...++.++|.|++++|+|++|+..+
T Consensus 2 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~------------------~p-~~~~~~~la~~~~~~g~~~~A~~~~ 62 (514)
T 2gw1_A 2 KDKYALALKDKGNQFFRNKKYDDAIKYYNWALEL------------------KE-DPVFYSNLSACYVSVGDLKKVVEMS 62 (514)
T ss_dssp HHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH------------------CC-CHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhccHHHHHHHHHHHHhc------------------Cc-cHHHHHhHHHHHHHHhhHHHHHHHH
Confidence 3467889999999999999999999999999993 23 2568999999999999999999999
Q ss_pred HHHHHcCCCchHHHHHHHHHhhhh
Q 021445 288 EFAMRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 288 ~~al~l~p~~~Ka~~rrg~a~~~L 311 (312)
+++++++|++..+|+.+|.+|..+
T Consensus 63 ~~al~~~p~~~~~~~~l~~~~~~~ 86 (514)
T 2gw1_A 63 TKALELKPDYSKVLLRRASANEGL 86 (514)
T ss_dssp HHHHHHCSCCHHHHHHHHHHHHHT
T ss_pred HHHhccChHHHHHHHHHHHHHHHH
Confidence 999999999999999999999765
No 83
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=98.82 E-value=4.5e-09 Score=99.60 Aligned_cols=92 Identities=25% Similarity=0.329 Sum_probs=82.7
Q ss_pred CCChhhhhhhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHH
Q 021445 202 PNELSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLK 281 (312)
Q Consensus 202 ~~~~~~~~~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~ 281 (312)
..+.++..+.+..+...|+.+++.|+|++|+..|+++++ ..|....++.++|.||+++|+|+
T Consensus 15 ~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~~~~~la~~~~~~g~~~ 76 (537)
T 3fp2_A 15 GLSPSQRQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIE------------------LDPNEPVFYSNISACYISTGDLE 76 (537)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHHTCHH
T ss_pred CCCcchhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHh------------------hCCCCcHHHHHHHHHHHHcCCHH
Confidence 345566667889999999999999999999999999999 45566789999999999999999
Q ss_pred HHHHHHHHHHHcCCCchHHHHHHHHHhhhh
Q 021445 282 GALLDTEFAMRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 282 ~Ai~~~~~al~l~p~~~Ka~~rrg~a~~~L 311 (312)
+|++.++++++++|+++.+++.+|.++..+
T Consensus 77 ~A~~~~~~al~~~p~~~~~~~~la~~~~~~ 106 (537)
T 3fp2_A 77 KVIEFTTKALEIKPDHSKALLRRASANESL 106 (537)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHHc
Confidence 999999999999999999999999999765
No 84
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=98.81 E-value=4.6e-09 Score=84.62 Aligned_cols=76 Identities=13% Similarity=0.117 Sum_probs=65.0
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHH----hHHHHHHHHcCCHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIF----TNSSACKLKLGDLKGALLDT 287 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~N~a~~~~kl~~~~~Ai~~~ 287 (312)
+..+.++|..+.+.|+|++|+.+|++||++++.. .+++|....+| .|+|.++.++|+|++|+.++
T Consensus 57 a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~-----------~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y 125 (159)
T 2hr2_A 57 AFCHAGLAEALAGLRSFDEALHSADKALHYFNRR-----------GELNQDEGKLWISAVYSRALALDGLGRGAEAMPEF 125 (159)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----------CCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc-----------ccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHH
Confidence 4478999999999999999999999999953331 11266677778 99999999999999999999
Q ss_pred HHHHHcCCCch
Q 021445 288 EFAMRDGDDNV 298 (312)
Q Consensus 288 ~~al~l~p~~~ 298 (312)
++||+++|++.
T Consensus 126 ~kAlel~p~d~ 136 (159)
T 2hr2_A 126 KKVVEMIEERK 136 (159)
T ss_dssp HHHHHHHHHCC
T ss_pred HHHHhcCCCcH
Confidence 99999998765
No 85
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=98.80 E-value=1.1e-08 Score=92.59 Aligned_cols=82 Identities=18% Similarity=0.148 Sum_probs=75.8
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+.+.|..+++.|+|++|+..|++||+ +.|....+|.|+|.+|+++++|++|+.++.+||
T Consensus 196 ~~~~~nla~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al 257 (336)
T 1p5q_A 196 LASHLNLAMCHLKLQAFSAAIESCNKALE------------------LDSNNEKGLSRRGEAHLAVNDFELARADFQKVL 257 (336)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------hCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 46778899999999999999999999999 556677899999999999999999999999999
Q ss_pred HcCCCchHHHHHHHHHhhhh
Q 021445 292 RDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 292 ~l~p~~~Ka~~rrg~a~~~L 311 (312)
+++|++..+++.+|.++..+
T Consensus 258 ~l~P~~~~a~~~l~~~~~~~ 277 (336)
T 1p5q_A 258 QLYPNNKAAKTQLAVCQQRI 277 (336)
T ss_dssp HHCSSCHHHHHHHHHHHHHH
T ss_pred HHCCCCHHHHHHHHHHHHHH
Confidence 99999999999999998754
No 86
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.78 E-value=3.4e-08 Score=73.76 Aligned_cols=83 Identities=23% Similarity=0.139 Sum_probs=69.6
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+.+.|..+|+.++|..|+..|++|++...... . .......++.++|.|+.++|++++|+...++|+
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~---~--------~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al 73 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGE---I--------STIDKVSVLDYLSYAVYQQGDLDKALLLTKKLL 73 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTC---C--------CSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccC---C--------CcccHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 45678999999999999999999999999653210 0 012345788999999999999999999999999
Q ss_pred HcCCCchHHHHHHH
Q 021445 292 RDGDDNVKALFRQG 305 (312)
Q Consensus 292 ~l~p~~~Ka~~rrg 305 (312)
+++|++..++..++
T Consensus 74 ~l~P~~~~~~~n~~ 87 (104)
T 2v5f_A 74 ELDPEHQRANGNLK 87 (104)
T ss_dssp HHCTTCHHHHHHHH
T ss_pred hcCCCCHHHHhhHH
Confidence 99999999987776
No 87
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.78 E-value=1.7e-08 Score=80.84 Aligned_cols=80 Identities=11% Similarity=0.071 Sum_probs=69.7
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+.+.|..+++.|+|++|+..|++||+ ++|....+|.++|.||+.+|+|++|+.++.++
T Consensus 62 ~~~~~~nla~~~~~~~~~~~A~~~~~~al~------------------~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a 123 (162)
T 3rkv_A 62 NIPLYANMSQCYLNIGDLHEAEETSSEVLK------------------REETNEKALFRRAKARIAAWKLDEAEEDLKLL 123 (162)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHH------------------HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHh------------------cCCcchHHHHHHHHHHHHHhcHHHHHHHHHHH
Confidence 456678999999999999999999999999 66777889999999999999999999999999
Q ss_pred HHcCCCchHH-HHHHHHHh
Q 021445 291 MRDGDDNVKA-LFRQGQVS 308 (312)
Q Consensus 291 l~l~p~~~Ka-~~rrg~a~ 308 (312)
|+++|++..+ ....+.+.
T Consensus 124 l~l~p~~~~~~~~~l~~~~ 142 (162)
T 3rkv_A 124 LRNHPAAASVVAREMKIVT 142 (162)
T ss_dssp HHHCGGGHHHHHHHHHHHH
T ss_pred HhcCCCCHHHHHHHHHHHH
Confidence 9999999843 44444443
No 88
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.77 E-value=1.7e-08 Score=76.90 Aligned_cols=82 Identities=13% Similarity=0.046 Sum_probs=74.0
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
...+...|..++..++|++|+..|.++++ +.+....++.++|.++.+++++++|+..+.+++
T Consensus 50 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~------------------~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~ 111 (133)
T 2lni_A 50 AKLYSNRAACYTKLLEFQLALKDCEECIQ------------------LEPTFIKGYTRKAAALEAMKDYTKAMDVYQKAL 111 (133)
T ss_dssp HHHHHHHHHHHTTTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHH------------------hCCCchHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 45578889999999999999999999999 344456789999999999999999999999999
Q ss_pred HcCCCchHHHHHHHHHhhhh
Q 021445 292 RDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 292 ~l~p~~~Ka~~rrg~a~~~L 311 (312)
+++|.+..+++..+.++..+
T Consensus 112 ~~~p~~~~~~~~l~~~~~~~ 131 (133)
T 2lni_A 112 DLDSSCKEAADGYQRCMMAQ 131 (133)
T ss_dssp HHCGGGTHHHHHHHHHHHHH
T ss_pred HhCCCchHHHHHHHHHHHHh
Confidence 99999999999999998764
No 89
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.76 E-value=1.3e-08 Score=96.06 Aligned_cols=82 Identities=16% Similarity=0.122 Sum_probs=71.2
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+.+.|..+++.++|++|+..|++||+ +.|....+|.|+|.||+++++|++|+.++.+||
T Consensus 317 ~~~~~nla~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al 378 (457)
T 1kt0_A 317 LAAFLNLAMCYLKLREYTKAVECCDKALG------------------LDSANEKGLYRRGEAQLLMNEFESAKGDFEKVL 378 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHh------------------cCCccHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 45567899999999999999999999999 556678899999999999999999999999999
Q ss_pred HcCCCchHHHHHHHHHhhhh
Q 021445 292 RDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 292 ~l~p~~~Ka~~rrg~a~~~L 311 (312)
+++|++..+++.++.++..+
T Consensus 379 ~l~P~~~~a~~~l~~~~~~~ 398 (457)
T 1kt0_A 379 EVNPQNKAARLQISMCQKKA 398 (457)
T ss_dssp TTC----CHHHHHHHHHHHH
T ss_pred HhCCCCHHHHHHHHHHHHHH
Confidence 99999999999999998754
No 90
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=98.74 E-value=1.6e-08 Score=85.44 Aligned_cols=82 Identities=17% Similarity=0.067 Sum_probs=67.4
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHc-----------CCH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKL-----------GDL 280 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl-----------~~~ 280 (312)
+..+...|..+++.|++++|+..|+++++ +.|....++.|+|.++.++ |++
T Consensus 39 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~------------------~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~ 100 (217)
T 2pl2_A 39 PEALYWLARTQLKLGLVNPALENGKTLVA------------------RTPRYLGGYMVLSEAYVALYRQAEDRERGKGYL 100 (217)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------hCCCcHHHHHHHHHHHHHhhhhhhhhcccccCH
Confidence 45578899999999999999999999999 5566667778888888888 888
Q ss_pred HHHHHHHHHHHHcCCCchHHHHHHHHHhhhh
Q 021445 281 KGALLDTEFAMRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 281 ~~Ai~~~~~al~l~p~~~Ka~~rrg~a~~~L 311 (312)
++|+..++++++++|+++.+|+.+|.+|..+
T Consensus 101 ~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~ 131 (217)
T 2pl2_A 101 EQALSVLKDAERVNPRYAPLHLQRGLVYALL 131 (217)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCcccHHHHHHHHHHHHHc
Confidence 8888888888888888888888888777653
No 91
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=98.74 E-value=3.2e-08 Score=80.52 Aligned_cols=53 Identities=11% Similarity=0.005 Sum_probs=44.9
Q ss_pred HHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHHHHHhhhh
Q 021445 259 LRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 259 ~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l~p~~~Ka~~rrg~a~~~L 311 (312)
+.|....++.++|.++.++|+|++|++.++++++++|.++.+|+.+|.+|..+
T Consensus 102 ~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~ 154 (184)
T 3vtx_A 102 LNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGK 154 (184)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred hCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHC
Confidence 34555678888999999999999999999999999999999999999888765
No 92
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=98.73 E-value=2e-08 Score=79.81 Aligned_cols=78 Identities=14% Similarity=0.098 Sum_probs=66.8
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+...|..+++.|+|++|+..|++|+. +.|....++.|+|.||+.+|++++|+..+.+++
T Consensus 55 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~------------------l~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 116 (148)
T 2vgx_A 55 SRFFLGLGACRQAMGQYDLAIHSYSYGAV------------------MDIXEPRFPFHAAECLLQXGELAEAESGLFLAQ 116 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHh------------------cCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 44567899999999999999999999999 556667799999999999999999999999999
Q ss_pred HcCCCchHHHHHHHHH
Q 021445 292 RDGDDNVKALFRQGQV 307 (312)
Q Consensus 292 ~l~p~~~Ka~~rrg~a 307 (312)
+++|.++.....+.++
T Consensus 117 ~~~p~~~~~~~~~~~~ 132 (148)
T 2vgx_A 117 ELIANXPEFXELSTRV 132 (148)
T ss_dssp HHHTTCGGGHHHHHHH
T ss_pred HHCcCCCcchHHHHHH
Confidence 9999877654433333
No 93
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.73 E-value=4.7e-08 Score=73.77 Aligned_cols=82 Identities=13% Similarity=0.011 Sum_probs=73.5
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+...|..++..|+|++|+..|.+++. ..|....++.++|.++.+++++++|+..+.+++
T Consensus 46 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~ 107 (131)
T 2vyi_A 46 AVYFCNRAAAYSKLGNYAGAVQDCERAIC------------------IDPAYSKAYGRMGLALSSLNKHVEAVAYYKKAL 107 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHh------------------cCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 44567889999999999999999999999 334446689999999999999999999999999
Q ss_pred HcCCCchHHHHHHHHHhhhh
Q 021445 292 RDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 292 ~l~p~~~Ka~~rrg~a~~~L 311 (312)
+++|.+..+++..|.++..+
T Consensus 108 ~~~p~~~~~~~~l~~~~~~~ 127 (131)
T 2vyi_A 108 ELDPDNETYKSNLKIAELKL 127 (131)
T ss_dssp HHSTTCHHHHHHHHHHHHHH
T ss_pred hcCccchHHHHHHHHHHHHH
Confidence 99999999999999998765
No 94
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=98.73 E-value=3.4e-08 Score=82.12 Aligned_cols=82 Identities=10% Similarity=0.004 Sum_probs=66.6
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+...|..+++.|+|++|+..|.++++ +.|....++.|+|.+|.++|+|++|+.++++++
T Consensus 37 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~------------------~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al 98 (213)
T 1hh8_A 37 SRICFNIGCMYTILKNMTEAEKAFTRSIN------------------RDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEAL 98 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------hCccchHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 34677888888888888888888888888 344456788889999999999999999999999
Q ss_pred HcCCCch----------------HHHHHHHHHhhhh
Q 021445 292 RDGDDNV----------------KALFRQGQVSIIL 311 (312)
Q Consensus 292 ~l~p~~~----------------Ka~~rrg~a~~~L 311 (312)
++.|.+. .+++.+|.+|..+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 134 (213)
T 1hh8_A 99 IQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKK 134 (213)
T ss_dssp HTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHT
T ss_pred HhCCCccHHHHHHhccccCccchHHHHHHHHHHHHc
Confidence 8777766 8888888888654
No 95
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=98.72 E-value=1.8e-08 Score=79.10 Aligned_cols=80 Identities=18% Similarity=0.142 Sum_probs=68.6
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
...+...|..+++.|+|++|+..|++|+. +.|....++.|+|.|+..+|++++|+..+++++
T Consensus 52 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 113 (142)
T 2xcb_A 52 ARYFLGLGACRQSLGLYEQALQSYSYGAL------------------MDINEPRFPFHAAECHLQLGDLDGAESGFYSAR 113 (142)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHh------------------cCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 44567889999999999999999999999 556667789999999999999999999999999
Q ss_pred HcCCCchHHHHHHHHHhh
Q 021445 292 RDGDDNVKALFRQGQVSI 309 (312)
Q Consensus 292 ~l~p~~~Ka~~rrg~a~~ 309 (312)
+++|.++.....+.++..
T Consensus 114 ~~~p~~~~~~~~~~~~~~ 131 (142)
T 2xcb_A 114 ALAAAQPAHEALAARAGA 131 (142)
T ss_dssp HHHHTCGGGHHHHHHHHH
T ss_pred HhCCCCcchHHHHHHHHH
Confidence 999988766555555443
No 96
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.71 E-value=4.2e-08 Score=81.23 Aligned_cols=82 Identities=16% Similarity=0.101 Sum_probs=74.7
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+...|..+++.|+|++|+..|++++. +.|....++.++|.+|+++++|++|+..+.+++
T Consensus 88 ~~~~~~la~~~~~~~~~~~A~~~~~~al~------------------~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al 149 (198)
T 2fbn_A 88 ISCNLNLATCYNKNKDYPKAIDHASKVLK------------------IDKNNVKALYKLGVANMYFGFLEEAKENLYKAA 149 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHH------------------hCcccHHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 46678899999999999999999999999 455567799999999999999999999999999
Q ss_pred HcCCCchHHHHHHHHHhhhh
Q 021445 292 RDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 292 ~l~p~~~Ka~~rrg~a~~~L 311 (312)
+++|.+..++...+.++..+
T Consensus 150 ~~~p~~~~~~~~l~~~~~~~ 169 (198)
T 2fbn_A 150 SLNPNNLDIRNSYELCVNKL 169 (198)
T ss_dssp HHSTTCHHHHHHHHHHHHHH
T ss_pred HHCCCcHHHHHHHHHHHHHH
Confidence 99999999999999988654
No 97
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.70 E-value=4e-08 Score=74.34 Aligned_cols=73 Identities=8% Similarity=0.040 Sum_probs=66.0
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+...|..+++.|+|++|+..|+++++ +.|....++.|+|.|+.++|++++|+..+.++
T Consensus 26 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~------------------~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 87 (117)
T 3k9i_A 26 LAECYLGLGSTFRTLGEYRKAEAVLANGVK------------------QFPNHQALRVFYAMVLYNLGRYEQGVELLLKI 87 (117)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------hCCCchHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 356678999999999999999999999999 55666789999999999999999999999999
Q ss_pred HHcCCCchHHH
Q 021445 291 MRDGDDNVKAL 301 (312)
Q Consensus 291 l~l~p~~~Ka~ 301 (312)
++++|++....
T Consensus 88 l~~~p~~~~~~ 98 (117)
T 3k9i_A 88 IAETSDDETIQ 98 (117)
T ss_dssp HHHHCCCHHHH
T ss_pred HHhCCCcHHHH
Confidence 99999987654
No 98
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.68 E-value=8.7e-08 Score=71.64 Aligned_cols=99 Identities=23% Similarity=0.222 Sum_probs=50.4
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccc---------cCCCCchhh-------hHHHHHHHHHHhHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWE---------KEGIDEGKS-------SSLRKTKSQIFTNSSACKL 275 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~---------~~~~~~~~~-------~~~~~~~~~~~~N~a~~~~ 275 (312)
+..+...|..++..++|++|+..|.+++........ ......++. ....+....++.++|.++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 88 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYY 88 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH
Confidence 445566777777777777777777777763111000 000000000 0011223345555666666
Q ss_pred HcCCHHHHHHHHHHHHHcCCCchHHHHHHHHHhhh
Q 021445 276 KLGDLKGALLDTEFAMRDGDDNVKALFRQGQVSII 310 (312)
Q Consensus 276 kl~~~~~Ai~~~~~al~l~p~~~Ka~~rrg~a~~~ 310 (312)
+++++++|+..+.++++++|.+..+++..|.++..
T Consensus 89 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 123 (125)
T 1na0_A 89 KQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQK 123 (125)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHh
Confidence 66666666666666666666666666555555543
No 99
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=98.68 E-value=3.4e-08 Score=82.15 Aligned_cols=80 Identities=19% Similarity=0.102 Sum_probs=71.9
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+...|+.++..|+|++|+..|++++.. ...++.|+|.+|.++|+|++|+..++++
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~~---------------------~~~~~~~lg~~~~~~g~~~~A~~~~~~a 63 (213)
T 1hh8_A 5 EAISLWNEGVLAADKKDWKGALDAFSAVQDP---------------------HSRICFNIGCMYTILKNMTEAEKAFTRS 63 (213)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTSSSC---------------------CHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHcCC---------------------ChHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 4556789999999999999999999998640 1458999999999999999999999999
Q ss_pred HHcCCCchHHHHHHHHHhhhh
Q 021445 291 MRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 291 l~l~p~~~Ka~~rrg~a~~~L 311 (312)
++++|.++.+|+.+|.+|..+
T Consensus 64 l~~~~~~~~~~~~lg~~~~~~ 84 (213)
T 1hh8_A 64 INRDKHLAVAYFQRGMLYYQT 84 (213)
T ss_dssp HHHCTTCHHHHHHHHHHHHHT
T ss_pred HHhCccchHHHHHHHHHHHHc
Confidence 999999999999999999765
No 100
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.67 E-value=1.5e-08 Score=74.83 Aligned_cols=69 Identities=10% Similarity=0.054 Sum_probs=62.1
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+...|..+++.|+|++|+..|+++++ +.|....+|.++|.||.++|++++|++.+.+++
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al 68 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELVE------------------TDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGI 68 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------hCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 45688999999999999999999999999 556667799999999999999999999999999
Q ss_pred HcCCCch
Q 021445 292 RDGDDNV 298 (312)
Q Consensus 292 ~l~p~~~ 298 (312)
++.|.+.
T Consensus 69 ~l~~~~~ 75 (100)
T 3ma5_A 69 EVAREEG 75 (100)
T ss_dssp HHHHHHS
T ss_pred hhhhcCC
Confidence 9987543
No 101
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.66 E-value=3e-08 Score=79.65 Aligned_cols=76 Identities=14% Similarity=0.191 Sum_probs=65.5
Q ss_pred hhhhhHhhhhhHHhhhcH----------HHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcC--
Q 021445 211 AVDSIKVFGNEHYKKQDY----------KMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLG-- 278 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y----------~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~-- 278 (312)
.++.+.+.|+.+...+++ ++|+..|++||+ ++|....+|.|++.+|.+++
T Consensus 35 ~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~------------------ldP~~~~A~~~LG~ay~~lg~l 96 (158)
T 1zu2_A 35 DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALL------------------IDPKKDEAVWCIGNAYTSFAFL 96 (158)
T ss_dssp CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHH------------------hCcCcHHHHHHHHHHHHHhccc
Confidence 455678899999988775 599999999999 78888999999999999985
Q ss_pred ---------CHHHHHHHHHHHHHcCCCchHHHHHHHH
Q 021445 279 ---------DLKGALLDTEFAMRDGDDNVKALFRQGQ 306 (312)
Q Consensus 279 ---------~~~~Ai~~~~~al~l~p~~~Ka~~rrg~ 306 (312)
+|++|++++.+||+++|++. .|+++.
T Consensus 97 ~P~~~~a~g~~~eA~~~~~kAl~l~P~~~--~y~~al 131 (158)
T 1zu2_A 97 TPDETEAKHNFDLATQFFQQAVDEQPDNT--HYLKSL 131 (158)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHCTTCH--HHHHHH
T ss_pred CcchhhhhccHHHHHHHHHHHHHhCCCCH--HHHHHH
Confidence 89999999999999999986 444443
No 102
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=98.66 E-value=7.1e-08 Score=81.84 Aligned_cols=82 Identities=21% Similarity=0.362 Sum_probs=73.6
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+...|..++..|+|++|+..|+++++ ..|....++.++|.++.++|++++|+..+++++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~------------------~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al 200 (258)
T 3uq3_A 139 AEEARLEGKEYFTKSDWPNAVKAYTEMIK------------------RAPEDARGYSNRAAALAKLMSFPEAIADCNKAI 200 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHh------------------cCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 45567899999999999999999999998 334456789999999999999999999999999
Q ss_pred HcCCCchHHHHHHHHHhhhh
Q 021445 292 RDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 292 ~l~p~~~Ka~~rrg~a~~~L 311 (312)
+++|.+..+|+.+|.++..+
T Consensus 201 ~~~~~~~~~~~~l~~~~~~~ 220 (258)
T 3uq3_A 201 EKDPNFVRAYIRKATAQIAV 220 (258)
T ss_dssp HHCTTCHHHHHHHHHHHHHT
T ss_pred HhCHHHHHHHHHHHHHHHHH
Confidence 99999999999999998765
No 103
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.66 E-value=9.7e-08 Score=70.71 Aligned_cols=80 Identities=15% Similarity=0.045 Sum_probs=71.2
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
...+...|..++..|+|++|+..|.++++ ..|....++.++|.++.+++++++|+..+.+++
T Consensus 38 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~------------------~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~ 99 (118)
T 1elw_A 38 HVLYSNRSAAYAKKGDYQKAYEDGCKTVD------------------LKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGL 99 (118)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHH------------------hCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 44567889999999999999999999999 334456789999999999999999999999999
Q ss_pred HcCCCchHHHHHHHHHhh
Q 021445 292 RDGDDNVKALFRQGQVSI 309 (312)
Q Consensus 292 ~l~p~~~Ka~~rrg~a~~ 309 (312)
+++|.+..+++..+.+..
T Consensus 100 ~~~~~~~~~~~~l~~~~~ 117 (118)
T 1elw_A 100 KHEANNPQLKEGLQNMEA 117 (118)
T ss_dssp TTCTTCHHHHHHHHHHHH
T ss_pred HcCCCCHHHHHHHHHhhc
Confidence 999999999999888753
No 104
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.66 E-value=5.3e-08 Score=82.51 Aligned_cols=84 Identities=11% Similarity=0.101 Sum_probs=72.3
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+.+.|..+++.|+|++|+..|++++..... .+....++.++|.||+++|+|++|+..+++++
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~---------------~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l 68 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPF---------------GPYSQQVQLDLIYAYYKNADLPLAQAAIDRFI 68 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT---------------STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---------------ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 456889999999999999999999999983211 12235689999999999999999999999999
Q ss_pred HcCCCchH---HHHHHHHHhhh
Q 021445 292 RDGDDNVK---ALFRQGQVSII 310 (312)
Q Consensus 292 ~l~p~~~K---a~~rrg~a~~~ 310 (312)
+++|++.. |+|.+|.++..
T Consensus 69 ~~~P~~~~~~~a~~~~g~~~~~ 90 (225)
T 2yhc_A 69 RLNPTHPNIDYVMYMRGLTNMA 90 (225)
T ss_dssp HHCTTCTTHHHHHHHHHHHHHH
T ss_pred HHCcCCCcHHHHHHHHHHHHHh
Confidence 99999986 89999999864
No 105
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=98.65 E-value=8e-08 Score=81.02 Aligned_cols=81 Identities=12% Similarity=0.062 Sum_probs=72.5
Q ss_pred hhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHH
Q 021445 213 DSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMR 292 (312)
Q Consensus 213 ~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~ 292 (312)
..+...|..+++.|+|++|+..|.++++ +.|....++.++|.+|.++|++++|+..+.++++
T Consensus 43 ~~~~~~~~~~~~~~~~~~A~~~~~~al~------------------~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~ 104 (228)
T 4i17_A 43 VTAYNCGVCADNIKKYKEAADYFDIAIK------------------KNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIK 104 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------TTCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHH------------------hCcchHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 3456689999999999999999999998 5566788999999999999999999999999999
Q ss_pred cCCCch-------HHHHHHHHHhhhh
Q 021445 293 DGDDNV-------KALFRQGQVSIIL 311 (312)
Q Consensus 293 l~p~~~-------Ka~~rrg~a~~~L 311 (312)
++|++. .+|+.+|.++..+
T Consensus 105 ~~p~~~~~~~~~~~~~~~~g~~~~~~ 130 (228)
T 4i17_A 105 AVPGNATIEKLYAIYYLKEGQKFQQA 130 (228)
T ss_dssp HSTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HCCCcHHHHHHHHHHHHHHhHHHHHh
Confidence 999999 6688888887654
No 106
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=98.62 E-value=1e-07 Score=77.18 Aligned_cols=82 Identities=16% Similarity=0.246 Sum_probs=72.4
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHH-HHHcCCH--HHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSAC-KLKLGDL--KGALLDTE 288 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~-~~kl~~~--~~Ai~~~~ 288 (312)
+..+...|..++..|+|++|+..|.+++. +.|....++.++|.+ +++++++ ++|+..+.
T Consensus 44 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~------------------~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~ 105 (177)
T 2e2e_A 44 SEQWALLGEYYLWQNDYSNSLLAYRQALQ------------------LRGENAELYAALATVLYYQASQHMTAQTRAMID 105 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------cCCCCHHHHHHHHHHHHHhcCCcchHHHHHHHH
Confidence 45678899999999999999999999999 455567788999999 8899998 99999999
Q ss_pred HHHHcCCCchHHHHHHHHHhhhh
Q 021445 289 FAMRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 289 ~al~l~p~~~Ka~~rrg~a~~~L 311 (312)
++++++|.+..+++.+|.+|..+
T Consensus 106 ~al~~~p~~~~~~~~la~~~~~~ 128 (177)
T 2e2e_A 106 KALALDSNEITALMLLASDAFMQ 128 (177)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHhCCCcHHHHHHHHHHHHHc
Confidence 99999999999999999988754
No 107
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.61 E-value=1.8e-07 Score=69.88 Aligned_cols=50 Identities=18% Similarity=0.194 Sum_probs=45.1
Q ss_pred HHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHHHHHhhhh
Q 021445 262 TKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 262 ~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l~p~~~Ka~~rrg~a~~~L 311 (312)
....++.++|.++.+++++++|+..+.++++++|.+..+++..|.++..+
T Consensus 41 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~ 90 (125)
T 1na0_A 41 NNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQ 90 (125)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHh
Confidence 34568899999999999999999999999999999999999999988754
No 108
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.61 E-value=7.9e-08 Score=88.33 Aligned_cols=82 Identities=15% Similarity=0.121 Sum_probs=73.3
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+.+.|..+++.++|++|+..|++||+ +.|....+|.++|.||+++++|++|+.++.+|+
T Consensus 273 ~~~~~nla~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al 334 (370)
T 1ihg_A 273 LSCVLNIGACKLKMSDWQGAVDSCLEALE------------------IDPSNTKALYRRAQGWQGLKEYDQALADLKKAQ 334 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHT------------------TCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHH------------------hCchhHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 34467789999999999999999999999 445567899999999999999999999999999
Q ss_pred HcCCCchHHHHHHHHHhhhh
Q 021445 292 RDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 292 ~l~p~~~Ka~~rrg~a~~~L 311 (312)
+++|++..++...+.++..+
T Consensus 335 ~l~P~~~~~~~~l~~~~~~~ 354 (370)
T 1ihg_A 335 EIAPEDKAIQAELLKVKQKI 354 (370)
T ss_dssp HHCTTCHHHHHHHHHHHHHH
T ss_pred HhCCCCHHHHHHHHHHHHHH
Confidence 99999999999999887654
No 109
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=98.60 E-value=1.1e-07 Score=84.58 Aligned_cols=83 Identities=17% Similarity=0.161 Sum_probs=75.3
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.++.+...|+.++..|+|++|+..|+++++ ..|....++.++|.|++.+|++++|+..+.++
T Consensus 2 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~------------------~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~ 63 (359)
T 3ieg_A 2 DVEKHLELGKKLLAAGQLADALSQFHAAVD------------------GDPDNYIAYYRRATVFLAMGKSKAALPDLTKV 63 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHh------------------hCcccHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 356788999999999999999999999999 44455679999999999999999999999999
Q ss_pred HHcCCCchHHHHHHHHHhhhh
Q 021445 291 MRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 291 l~l~p~~~Ka~~rrg~a~~~L 311 (312)
++++|.+..+++.+|.++..+
T Consensus 64 ~~~~~~~~~~~~~l~~~~~~~ 84 (359)
T 3ieg_A 64 IALKMDFTAARLQRGHLLLKQ 84 (359)
T ss_dssp HHHCTTCHHHHHHHHHHHHHH
T ss_pred HHhCCCcchHHHHHHHHHHHc
Confidence 999999999999999998764
No 110
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=98.60 E-value=8.2e-08 Score=95.15 Aligned_cols=82 Identities=11% Similarity=-0.019 Sum_probs=73.9
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+...|..+++.|+|++|+..|+++++ ++|....+|.|+|.+++++|+|++|+.++++||
T Consensus 433 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al 494 (681)
T 2pzi_A 433 VELPLMEVRALLDLGDVAKATRKLDDLAE------------------RVGWRWRLVWYRAVAELLTGDYDSATKHFTEVL 494 (681)
T ss_dssp SHHHHHHHHHHHHHTCHHHHHHHHHHHHH------------------HHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHhcCCHHHHHHHHHHHhc------------------cCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 34567889999999999999999999999 677778899999999999999999999999999
Q ss_pred HcCCCchHHHHHHHHHhhhh
Q 021445 292 RDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 292 ~l~p~~~Ka~~rrg~a~~~L 311 (312)
+++|+++.+|+.+|.+|..+
T Consensus 495 ~l~P~~~~~~~~lg~~~~~~ 514 (681)
T 2pzi_A 495 DTFPGELAPKLALAATAELA 514 (681)
T ss_dssp HHSTTCSHHHHHHHHHHHHH
T ss_pred HhCCCChHHHHHHHHHHHHc
Confidence 99999999999999998764
No 111
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=98.59 E-value=1.2e-07 Score=81.53 Aligned_cols=83 Identities=12% Similarity=0.047 Sum_probs=74.1
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+...|..++..|+|++|+..|.++++ +.|....++.++|.++.++|++++|+..+.++
T Consensus 42 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~------------------~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a 103 (275)
T 1xnf_A 42 RAQLLYERGVLYDSLGLRALARNDFSQALA------------------IRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSV 103 (275)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHH------------------cCCCcHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 355678889999999999999999999999 34445678999999999999999999999999
Q ss_pred HHcCCCchHHHHHHHHHhhhh
Q 021445 291 MRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 291 l~l~p~~~Ka~~rrg~a~~~L 311 (312)
++++|.+..+++.+|.+|..+
T Consensus 104 l~~~~~~~~~~~~la~~~~~~ 124 (275)
T 1xnf_A 104 LELDPTYNYAHLNRGIALYYG 124 (275)
T ss_dssp HHHCTTCTHHHHHHHHHHHHT
T ss_pred HhcCccccHHHHHHHHHHHHh
Confidence 999999999999999998764
No 112
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=98.58 E-value=8.4e-08 Score=82.81 Aligned_cols=85 Identities=9% Similarity=-0.005 Sum_probs=72.7
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+...|..+++.|+|++|+..|+++++.... .+....++.++|.||+++|+|++|+..++++
T Consensus 14 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~---------------~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~ 78 (261)
T 3qky_A 14 SPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRT---------------HEWAADAQFYLARAYYQNKEYLLAASEYERF 78 (261)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSC---------------STTHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC---------------CcchHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 4667899999999999999999999999983211 1223678999999999999999999999999
Q ss_pred HHcCCC---chHHHHHHHHHhhh
Q 021445 291 MRDGDD---NVKALFRQGQVSII 310 (312)
Q Consensus 291 l~l~p~---~~Ka~~rrg~a~~~ 310 (312)
+++.|+ ...+++.+|.++..
T Consensus 79 l~~~p~~~~~~~a~~~lg~~~~~ 101 (261)
T 3qky_A 79 IQIYQIDPRVPQAEYERAMCYYK 101 (261)
T ss_dssp HHHCTTCTTHHHHHHHHHHHHHH
T ss_pred HHHCCCCchhHHHHHHHHHHHHH
Confidence 999885 46799999999875
No 113
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=98.57 E-value=1.5e-07 Score=84.88 Aligned_cols=83 Identities=11% Similarity=0.033 Sum_probs=75.7
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+...|..+++.|+|++|+..|++++. ..|....++.++|.++.++|++++|+..++++
T Consensus 64 ~~~~~~~~~~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 125 (365)
T 4eqf_A 64 DWPGAFEEGLKRLKEGDLPVTILFMEAAIL------------------QDPGDAEAWQFLGITQAENENEQAAIVALQRC 125 (365)
T ss_dssp TCTTHHHHHHHHHHHTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHCCCHHHHHHHHHHHHH------------------hCcCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 355688999999999999999999999999 44556778999999999999999999999999
Q ss_pred HHcCCCchHHHHHHHHHhhhh
Q 021445 291 MRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 291 l~l~p~~~Ka~~rrg~a~~~L 311 (312)
++++|.+..+|+.+|.+|..+
T Consensus 126 l~~~p~~~~~~~~l~~~~~~~ 146 (365)
T 4eqf_A 126 LELQPNNLKALMALAVSYTNT 146 (365)
T ss_dssp HHHCTTCHHHHHHHHHHHHHT
T ss_pred HhcCCCCHHHHHHHHHHHHcc
Confidence 999999999999999998764
No 114
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.54 E-value=5.8e-08 Score=74.34 Aligned_cols=70 Identities=9% Similarity=0.055 Sum_probs=58.2
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+...|..++..|++++|+..|++|++ ++|....++.++|.++.++|++++|+..+++++
T Consensus 51 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~------------------l~P~~~~~~~~la~~~~~~g~~~~A~~~~~~al 112 (121)
T 1hxi_A 51 EEAWRSLGLTQAENEKDGLAIIALNHARM------------------LDPKDIAVHAALAVSHTNEHNANAALASLRAWL 112 (121)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 44567899999999999999999999999 667778899999999999999999999999999
Q ss_pred HcCCCchH
Q 021445 292 RDGDDNVK 299 (312)
Q Consensus 292 ~l~p~~~K 299 (312)
+++|.+.+
T Consensus 113 ~~~P~~~~ 120 (121)
T 1hxi_A 113 LSQPQYEQ 120 (121)
T ss_dssp C-------
T ss_pred HhCcCCCC
Confidence 99998764
No 115
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.54 E-value=2.9e-07 Score=72.82 Aligned_cols=78 Identities=18% Similarity=0.180 Sum_probs=68.3
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
...+...|..++..|+|++|+..|.+++. +.|....++.++|.++.++|++++|+..+.+++
T Consensus 47 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~------------------~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~ 108 (166)
T 1a17_A 47 AIYYGNRSLAYLRTECYGYALGDATRAIE------------------LDKKYIKGYYRRAASNMALGKFRAALRDYETVV 108 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------hCcccHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 44567889999999999999999999999 344456789999999999999999999999999
Q ss_pred HcCCCchHHHHHHHHH
Q 021445 292 RDGDDNVKALFRQGQV 307 (312)
Q Consensus 292 ~l~p~~~Ka~~rrg~a 307 (312)
+++|.+..++...+.+
T Consensus 109 ~~~p~~~~~~~~~~~~ 124 (166)
T 1a17_A 109 KVKPHDKDAKMKYQEC 124 (166)
T ss_dssp HHSTTCHHHHHHHHHH
T ss_pred HhCCCCHHHHHHHHHH
Confidence 9999999988555555
No 116
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.54 E-value=2.6e-07 Score=71.60 Aligned_cols=80 Identities=21% Similarity=0.098 Sum_probs=70.8
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
...+...|..++..++|++|+..|.++++ +.|....++.++|.++.+++++++|+..+.+++
T Consensus 65 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~------------------~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al 126 (148)
T 2dba_A 65 AVLHRNRAACHLKLEDYDKAETEASKAIE------------------KDGGDVKALYRRSQALEKLGRLDQAVLDLQRCV 126 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HTSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHh------------------hCccCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 45577889999999999999999999999 344456789999999999999999999999999
Q ss_pred HcCCCchHHHHHHHHHhh
Q 021445 292 RDGDDNVKALFRQGQVSI 309 (312)
Q Consensus 292 ~l~p~~~Ka~~rrg~a~~ 309 (312)
+++|++..++...+.+..
T Consensus 127 ~~~p~~~~~~~~l~~~~~ 144 (148)
T 2dba_A 127 SLEPKNKVFQEALRNISG 144 (148)
T ss_dssp HHCSSCHHHHHHHHHHHC
T ss_pred HcCCCcHHHHHHHHHHHh
Confidence 999999999988877654
No 117
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.54 E-value=6.7e-07 Score=67.36 Aligned_cols=88 Identities=15% Similarity=0.085 Sum_probs=70.9
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+...|..++..|+|++|+..|.+++...... ....+....++.++|.++.+++++++|+..+.+++
T Consensus 38 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~ 106 (131)
T 1elr_A 38 MTYITNQAAVYFEKGDYNKCRELCEKAIEVGREN-----------REDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSL 106 (131)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS-----------TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhcccc-----------chhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 3456788999999999999999999999942210 00112237789999999999999999999999999
Q ss_pred HcCCCchHHHHHHHHHhhhh
Q 021445 292 RDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 292 ~l~p~~~Ka~~rrg~a~~~L 311 (312)
+++| +...+...+.++..+
T Consensus 107 ~~~~-~~~~~~~l~~~~~~~ 125 (131)
T 1elr_A 107 AEHR-TPDVLKKCQQAEKIL 125 (131)
T ss_dssp HHCC-CHHHHHHHHHHHHHH
T ss_pred HhCC-CHHHHHHHHHHHHHH
Confidence 9998 688888888877654
No 118
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=98.53 E-value=1e-07 Score=80.89 Aligned_cols=82 Identities=24% Similarity=0.361 Sum_probs=73.9
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.++.+...|+.++..|+|++|+..|+++++. . ....++.++|.++.+++++++|+..+.++
T Consensus 4 ~a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~------------------~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 64 (258)
T 3uq3_A 4 MADKEKAEGNKFYKARQFDEAIEHYNKAWEL------------------H-KDITYLNNRAAAEYEKGEYETAISTLNDA 64 (258)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------------------S-CCTHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHh------------------h-ccHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 5778999999999999999999999999994 2 23568999999999999999999999999
Q ss_pred HHcCCCc-------hHHHHHHHHHhhhh
Q 021445 291 MRDGDDN-------VKALFRQGQVSIIL 311 (312)
Q Consensus 291 l~l~p~~-------~Ka~~rrg~a~~~L 311 (312)
++++|.+ +.+|+.+|.++..+
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 92 (258)
T 3uq3_A 65 VEQGREMRADYKVISKSFARIGNAYHKL 92 (258)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHhCcccccchHHHHHHHHHHHHHHHHc
Confidence 9999877 79999999998765
No 119
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.53 E-value=1.9e-07 Score=82.21 Aligned_cols=90 Identities=10% Similarity=0.047 Sum_probs=76.1
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+...|..++..|+|++|+..|.+|++.+...+ ...+....+|.|+|.+|.++|+|++|+..+++|
T Consensus 154 ~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~-----------~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~a 222 (293)
T 3u3w_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALH-----------DNEEFDVKVRYNHAKALYLDSRYEESLYQVNKA 222 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSS-----------CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcc-----------cchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 455688999999999999999999999998764421 134566779999999999999999999999999
Q ss_pred HHcCCCc------hHHHHHHHHHhhhh
Q 021445 291 MRDGDDN------VKALFRQGQVSIIL 311 (312)
Q Consensus 291 l~l~p~~------~Ka~~rrg~a~~~L 311 (312)
|++.+.. +.+|+.+|.+|..+
T Consensus 223 l~~~~~~~~~~~~~~~~~~lg~~~~~~ 249 (293)
T 3u3w_A 223 IEISCRINSMALIGQLYYQRGECLRKL 249 (293)
T ss_dssp HHHHHHTTBCTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHcCcHHHHHHHHHHHHHHHHHh
Confidence 9886544 78999999999865
No 120
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=98.51 E-value=2.5e-07 Score=87.63 Aligned_cols=82 Identities=17% Similarity=0.087 Sum_probs=74.2
Q ss_pred hhhhHhhhhhHHhh--------hcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHH---HHHHHHhHHHHHHHHcCCH
Q 021445 212 VDSIKVFGNEHYKK--------QDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRK---TKSQIFTNSSACKLKLGDL 280 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~--------~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~N~a~~~~kl~~~ 280 (312)
+..+...|..++.. |+|++|+..|++|++ +.| ....+|.|+|.+|.++|+|
T Consensus 213 ~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~~~~~~~~lg~~~~~~g~~ 274 (474)
T 4abn_A 213 GRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEK------------------VDRKASSNPDLHLNRATLHKYEESY 274 (474)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH------------------HCGGGGGCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHH------------------hCCCcccCHHHHHHHHHHHHHcCCH
Confidence 34467888899888 999999999999999 455 6788999999999999999
Q ss_pred HHHHHHHHHHHHcCCCchHHHHHHHHHhhhh
Q 021445 281 KGALLDTEFAMRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 281 ~~Ai~~~~~al~l~p~~~Ka~~rrg~a~~~L 311 (312)
++|++.+.+|++++|++..+++.++.++..+
T Consensus 275 ~~A~~~~~~al~l~p~~~~a~~~l~~~~~~l 305 (474)
T 4abn_A 275 GEALEGFSQAAALDPAWPEPQQREQQLLEFL 305 (474)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998764
No 121
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=98.50 E-value=3.1e-07 Score=82.73 Aligned_cols=82 Identities=15% Similarity=0.125 Sum_probs=73.9
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+...|..+.+.|+|++|+..|+++++ +.|....++.++|.++.++|++++|+..+.+++
T Consensus 213 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 274 (365)
T 4eqf_A 213 PDLQTGLGVLFHLSGEFNRAIDAFNAALT------------------VRPEDYSLWNRLGATLANGDRSEEAVEAYTRAL 274 (365)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHH------------------hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 44567889999999999999999999999 445556789999999999999999999999999
Q ss_pred HcCCCchHHHHHHHHHhhhh
Q 021445 292 RDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 292 ~l~p~~~Ka~~rrg~a~~~L 311 (312)
+++|+++.+|+.+|.+|..+
T Consensus 275 ~~~p~~~~~~~~l~~~~~~~ 294 (365)
T 4eqf_A 275 EIQPGFIRSRYNLGISCINL 294 (365)
T ss_dssp HHCTTCHHHHHHHHHHHHHH
T ss_pred hcCCCchHHHHHHHHHHHHC
Confidence 99999999999999999764
No 122
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=98.49 E-value=6.8e-08 Score=95.74 Aligned_cols=98 Identities=12% Similarity=0.007 Sum_probs=74.4
Q ss_pred hhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhcc-----------ccCCCCc----hhhhHHHHHHHHHHhHHHHHHHHc
Q 021445 213 DSIKVFGNEHYKKQDYKMALRKYRKALRYLDICW-----------EKEGIDE----GKSSSLRKTKSQIFTNSSACKLKL 277 (312)
Q Consensus 213 ~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~-----------~~~~~~~----~~~~~~~~~~~~~~~N~a~~~~kl 277 (312)
..+...|..+++.|+|++|+..|++||++-.... .....++ +....++|....+|.|+|.++.++
T Consensus 468 ~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~~~~~~~al~~~P~~~~a~~~lg~~~~~~ 547 (681)
T 2pzi_A 468 RLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDEHKFYQTVWSTNDGVISAAFGLARARSAE 547 (681)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCTTCHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHHHHHHHHHHHhCCchHHHHHHHHHHHHHc
Confidence 3457889999999999999999999998532210 0111111 112235566778899999999999
Q ss_pred CCHHHHHHHHHHHHHcCCCchHHHHHHHHHhhh
Q 021445 278 GDLKGALLDTEFAMRDGDDNVKALFRQGQVSII 310 (312)
Q Consensus 278 ~~~~~Ai~~~~~al~l~p~~~Ka~~rrg~a~~~ 310 (312)
|++++|+.++++|++++|++..|++.+|.+++.
T Consensus 548 g~~~~A~~~~~~al~l~P~~~~a~~~~~~~~~~ 580 (681)
T 2pzi_A 548 GDRVGAVRTLDEVPPTSRHFTTARLTSAVTLLS 580 (681)
T ss_dssp TCHHHHHHHHHTSCTTSTTHHHHHHHHHHHTC-
T ss_pred CCHHHHHHHHHhhcccCcccHHHHHHHHHHHHc
Confidence 999999999999999999999999999998754
No 123
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=98.49 E-value=3e-08 Score=80.35 Aligned_cols=81 Identities=14% Similarity=0.078 Sum_probs=67.3
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
...+...++.++..|+|++|+..|.+++. ..|....++.++|.+|+.+++|++|+..+.+++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~------------------~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al 71 (177)
T 2e2e_A 10 YQRQRDPLHQFASQQNPEAQLQALQDKIR------------------ANPQNSEQWALLGEYYLWQNDYSNSLLAYRQAL 71 (177)
T ss_dssp CCCSSTTTCCCC-----CCCCHHHHHHHH------------------HCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHhhhhhhhhhccCHHHHHHHHHHHHH------------------hCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 45567778889999999999999999999 445556789999999999999999999999999
Q ss_pred HcCCCchHHHHHHHHH-hhh
Q 021445 292 RDGDDNVKALFRQGQV-SII 310 (312)
Q Consensus 292 ~l~p~~~Ka~~rrg~a-~~~ 310 (312)
+++|.+..+++.+|.+ +..
T Consensus 72 ~~~p~~~~~~~~la~~l~~~ 91 (177)
T 2e2e_A 72 QLRGENAELYAALATVLYYQ 91 (177)
T ss_dssp HHHCSCHHHHHHHHHHHHHH
T ss_pred HcCCCCHHHHHHHHHHHHHh
Confidence 9999999999999999 543
No 124
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.47 E-value=3.5e-07 Score=68.61 Aligned_cols=79 Identities=16% Similarity=0.093 Sum_probs=65.3
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+...|..++..|+|++|+..|+++++ +.|....++.++|.||.++|++++|+..+.+++
T Consensus 19 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al 80 (115)
T 2kat_A 19 MLLRFTLGKTYAEHEQFDAALPHLRAALD------------------FDPTYSVAWKWLGKTLQGQGDRAGARQAWESGL 80 (115)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHH------------------HCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 45678899999999999999999999999 455567789999999999999999999999999
Q ss_pred HcCCCc--hHHHHHHHHHh
Q 021445 292 RDGDDN--VKALFRQGQVS 308 (312)
Q Consensus 292 ~l~p~~--~Ka~~rrg~a~ 308 (312)
+++|.+ ..++.....++
T Consensus 81 ~~~~~~~~~~~~~~l~~~l 99 (115)
T 2kat_A 81 AAAQSRGDQQVVKELQVFL 99 (115)
T ss_dssp HHHHHHTCHHHHHHHHHHH
T ss_pred HhccccccHHHHHHHHHHH
Confidence 998853 34444444433
No 125
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.46 E-value=4.1e-07 Score=84.12 Aligned_cols=83 Identities=17% Similarity=0.170 Sum_probs=75.7
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+...|..+++.|+|++|+..|+++++ ..|....++.++|.|++++|++++|+..+.++
T Consensus 25 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~------------------~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 86 (450)
T 2y4t_A 25 DVEKHLELGKKLLAAGQLADALSQFHAAVD------------------GDPDNYIAYYRRATVFLAMGKSKAALPDLTKV 86 (450)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHH------------------hCCccHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 567789999999999999999999999998 34455779999999999999999999999999
Q ss_pred HHcCCCchHHHHHHHHHhhhh
Q 021445 291 MRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 291 l~l~p~~~Ka~~rrg~a~~~L 311 (312)
++++|.+..+++.+|.+|..+
T Consensus 87 l~~~p~~~~~~~~l~~~~~~~ 107 (450)
T 2y4t_A 87 IQLKMDFTAARLQRGHLLLKQ 107 (450)
T ss_dssp HHHCTTCHHHHHHHHHHHHHT
T ss_pred HhcCCCcHHHHHHHHHHHHHc
Confidence 999999999999999998764
No 126
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=98.46 E-value=6.4e-07 Score=68.96 Aligned_cols=74 Identities=11% Similarity=0.019 Sum_probs=61.6
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+.+.|..+++.|+|++|+..|++||++-... .........+|.|+|.++.++++|++|++.+.++|
T Consensus 42 ~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~-----------~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal 110 (127)
T 4gcn_A 42 ITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRET-----------RADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSL 110 (127)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-----------TCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCccc-----------chhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4567899999999999999999999999953211 00123456799999999999999999999999999
Q ss_pred HcCCC
Q 021445 292 RDGDD 296 (312)
Q Consensus 292 ~l~p~ 296 (312)
.++|+
T Consensus 111 ~~~~~ 115 (127)
T 4gcn_A 111 SEFRD 115 (127)
T ss_dssp HHSCC
T ss_pred hhCcC
Confidence 99875
No 127
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.46 E-value=6.5e-07 Score=67.95 Aligned_cols=79 Identities=10% Similarity=0.116 Sum_probs=65.3
Q ss_pred hhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHH
Q 021445 213 DSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMR 292 (312)
Q Consensus 213 ~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~ 292 (312)
..+...|..+++.|+|++|+..|.+++..... .+....++.++|.|+.++|++++|+..+++++.
T Consensus 40 ~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~---------------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~ 104 (129)
T 2xev_A 40 NALYWLGESYYATRNFQLAEAQFRDLVSRYPT---------------HDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVAT 104 (129)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---------------STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHCCC---------------CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 46778999999999999999999999983211 011266899999999999999999999999999
Q ss_pred cCCCchHHHHHHHH
Q 021445 293 DGDDNVKALFRQGQ 306 (312)
Q Consensus 293 l~p~~~Ka~~rrg~ 306 (312)
..|++..+..-+..
T Consensus 105 ~~p~~~~~~~a~~~ 118 (129)
T 2xev_A 105 QYPGSDAARVAQER 118 (129)
T ss_dssp HSTTSHHHHHHHHH
T ss_pred HCCCChHHHHHHHH
Confidence 99998876655443
No 128
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.46 E-value=3e-07 Score=88.78 Aligned_cols=81 Identities=6% Similarity=-0.030 Sum_probs=52.8
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+...|..+++.|+|++|+..|++|++. .|....++.|+|.+|.++|++++|++.+++++
T Consensus 23 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~------------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 84 (568)
T 2vsy_A 23 FVAWLMLADAELGMGDTTAGEMAVQRGLAL------------------HPGHPEAVARLGRVRWTQQRHAEAAVLLQQAS 84 (568)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTT------------------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------------------CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 456778888888888888888888888872 23334455555555555555555555555555
Q ss_pred HcCCCchHHHHHHHHHhhh
Q 021445 292 RDGDDNVKALFRQGQVSII 310 (312)
Q Consensus 292 ~l~p~~~Ka~~rrg~a~~~ 310 (312)
+++|++..+|+.+|.+|..
T Consensus 85 ~~~p~~~~~~~~la~~~~~ 103 (568)
T 2vsy_A 85 DAAPEHPGIALWLGHALED 103 (568)
T ss_dssp HHCTTCHHHHHHHHHHHHH
T ss_pred hcCCCCHHHHHHHHHHHHH
Confidence 5555555555555555543
No 129
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=98.46 E-value=3.2e-07 Score=82.39 Aligned_cols=83 Identities=11% Similarity=-0.035 Sum_probs=74.7
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+...|..+++.|+|++|+..|+++++ ..|....++.++|.|+.++|++++|+..+.++
T Consensus 63 ~~~~~~~~~~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 124 (368)
T 1fch_A 63 DHPQPFEEGLRRLQEGDLPNAVLLFEAAVQ------------------QDPKHMEAWQYLGTTQAENEQELLAISALRRC 124 (368)
T ss_dssp TCSSHHHHHHHHHHTTCHHHHHHHHHHHHH------------------SCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHCCCHHHHHHHHHHHHH------------------hCCCCHHHHHHHHHHHHHCcCHHHHHHHHHHH
Confidence 355678999999999999999999999998 33445678999999999999999999999999
Q ss_pred HHcCCCchHHHHHHHHHhhhh
Q 021445 291 MRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 291 l~l~p~~~Ka~~rrg~a~~~L 311 (312)
++++|.+..+++.+|.+|..+
T Consensus 125 l~~~~~~~~~~~~l~~~~~~~ 145 (368)
T 1fch_A 125 LELKPDNQTALMALAVSFTNE 145 (368)
T ss_dssp HHHCTTCHHHHHHHHHHHHHT
T ss_pred HhcCCCCHHHHHHHHHHHHHc
Confidence 999999999999999998764
No 130
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=98.45 E-value=2.4e-07 Score=79.58 Aligned_cols=79 Identities=16% Similarity=0.270 Sum_probs=54.2
Q ss_pred hhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHH
Q 021445 213 DSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMR 292 (312)
Q Consensus 213 ~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~ 292 (312)
..+...|..+...|+|++|+..|.++++ +.|....++.++|.+|.++|++++|+..++++++
T Consensus 75 ~~~~~lg~~~~~~~~~~~A~~~~~~a~~------------------~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~ 136 (272)
T 3u4t_A 75 ADFEYYGKILMKKGQDSLAIQQYQAAVD------------------RDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIR 136 (272)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHh------------------cCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhh
Confidence 3356677777777777777777777777 3333445677777777777777777777777777
Q ss_pred cCCCchHHHHHHH-HHhh
Q 021445 293 DGDDNVKALFRQG-QVSI 309 (312)
Q Consensus 293 l~p~~~Ka~~rrg-~a~~ 309 (312)
++|.+..+|+.+| .+|.
T Consensus 137 ~~~~~~~~~~~l~~~~~~ 154 (272)
T 3u4t_A 137 PTTTDPKVFYELGQAYYY 154 (272)
T ss_dssp SSCCCHHHHHHHHHHHHH
T ss_pred cCCCcHHHHHHHHHHHHH
Confidence 7777777777777 5543
No 131
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=98.44 E-value=6.9e-07 Score=73.99 Aligned_cols=83 Identities=14% Similarity=-0.003 Sum_probs=61.1
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+...|..++..|++++|+..|.++++. .|....++.++|.++..+|++++|++.+.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~------------------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a 68 (225)
T 2vq2_A 7 VSNIKTQLAMEYMRGQDYRQATASIEDALKS------------------DPKNELAWLVRAEIYQYLKVNDKAQESFRQA 68 (225)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh------------------CccchHHHHHHHHHHHHcCChHHHHHHHHHH
Confidence 4556778888888888888888888888873 2333456777777777777777777777777
Q ss_pred HHcCCCchHHHHHHHHHhhhh
Q 021445 291 MRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 291 l~l~p~~~Ka~~rrg~a~~~L 311 (312)
++++|.+..+++.+|.++..+
T Consensus 69 ~~~~~~~~~~~~~l~~~~~~~ 89 (225)
T 2vq2_A 69 LSIKPDSAEINNNYGWFLCGR 89 (225)
T ss_dssp HHHCTTCHHHHHHHHHHHHTT
T ss_pred HHhCCCChHHHHHHHHHHHHh
Confidence 777777777777777776543
No 132
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=98.44 E-value=8.5e-07 Score=66.77 Aligned_cols=75 Identities=27% Similarity=0.351 Sum_probs=52.1
Q ss_pred hhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHcCCCch
Q 021445 219 GNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNV 298 (312)
Q Consensus 219 Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l~p~~~ 298 (312)
|..++..|++++|+..|.+++. ..+....++.+++.++.+++++++|+..+.++++..|.+.
T Consensus 42 a~~~~~~~~~~~A~~~~~~~~~------------------~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~ 103 (136)
T 2fo7_A 42 GNAYYKQGDYDEAIEYYQKALE------------------LDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSA 103 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHhcCHHHHHHHHHHHHH------------------HCCCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCh
Confidence 4444455555555555555554 2233355778888888888888888888888888888888
Q ss_pred HHHHHHHHHhhhh
Q 021445 299 KALFRQGQVSIIL 311 (312)
Q Consensus 299 Ka~~rrg~a~~~L 311 (312)
.+++..|.++..+
T Consensus 104 ~~~~~la~~~~~~ 116 (136)
T 2fo7_A 104 EAWYNLGNAYYKQ 116 (136)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHH
Confidence 8888888877653
No 133
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=98.44 E-value=5.4e-07 Score=80.83 Aligned_cols=82 Identities=16% Similarity=0.134 Sum_probs=72.2
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+...|..+++.|+|++|+..|++++. +.|....++.++|.++.++|++++|+..+++++
T Consensus 217 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~------------------~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 278 (368)
T 1fch_A 217 PDVQCGLGVLFNLSGEYDKAVDCFTAALS------------------VRPNDYLLWNKLGATLANGNQSEEAVAAYRRAL 278 (368)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------hCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 44567788999999999999999999998 344456789999999999999999999999999
Q ss_pred HcCCCchHHHHHHHHHhhhh
Q 021445 292 RDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 292 ~l~p~~~Ka~~rrg~a~~~L 311 (312)
+++|.+..+++.+|.+|..+
T Consensus 279 ~~~~~~~~~~~~l~~~~~~~ 298 (368)
T 1fch_A 279 ELQPGYIRSRYNLGISCINL 298 (368)
T ss_dssp HHCTTCHHHHHHHHHHHHHH
T ss_pred HhCCCcHHHHHHHHHHHHHC
Confidence 99999999999999998764
No 134
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.43 E-value=1.2e-07 Score=85.86 Aligned_cols=78 Identities=14% Similarity=0.075 Sum_probs=56.4
Q ss_pred hhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHc
Q 021445 214 SIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRD 293 (312)
Q Consensus 214 ~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l 293 (312)
.+.+.|..+++.++|++|+..|++||+ +.|....+|.|+|.+|+.+++|++|+.++.+++++
T Consensus 232 ~~~nla~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l 293 (338)
T 2if4_A 232 CHLNIAACLIKLKRYDEAIGHCNIVLT------------------EEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKY 293 (338)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH------------------hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 456889999999999999999999999 55666789999999999999999999999999999
Q ss_pred CCCchHHHHHHHHHhh
Q 021445 294 GDDNVKALFRQGQVSI 309 (312)
Q Consensus 294 ~p~~~Ka~~rrg~a~~ 309 (312)
+|++..++..++.+..
T Consensus 294 ~p~~~~a~~~L~~l~~ 309 (338)
T 2if4_A 294 APDDKAIRRELRALAE 309 (338)
T ss_dssp ----------------
T ss_pred CCCCHHHHHHHHHHHH
Confidence 9999999888776643
No 135
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.42 E-value=1.1e-06 Score=77.35 Aligned_cols=88 Identities=14% Similarity=0.056 Sum_probs=70.8
Q ss_pred hhhhHhhhhhHHhh-hcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKK-QDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~-~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
+..+.+.|..+... |+|++|+..|++||++..... .......++.|+|.++.++|+|++|+..++++
T Consensus 117 a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~------------~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 184 (292)
T 1qqe_A 117 ANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQ------------SVALSNKCFIKCADLKALDGQYIEASDIYSKL 184 (292)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCC------------ChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 45677888888886 999999999999999643210 01223568999999999999999999999999
Q ss_pred HHcCCCchH-------HHHHHHHHhhhh
Q 021445 291 MRDGDDNVK-------ALFRQGQVSIIL 311 (312)
Q Consensus 291 l~l~p~~~K-------a~~rrg~a~~~L 311 (312)
+++.|.+.. +|+++|.++..+
T Consensus 185 l~~~~~~~~~~~~~~~~~~~lg~~~~~~ 212 (292)
T 1qqe_A 185 IKSSMGNRLSQWSLKDYFLKKGLCQLAA 212 (292)
T ss_dssp HHTTSSCTTTGGGHHHHHHHHHHHHHHT
T ss_pred HHHHhcCCcccHHHHHHHHHHHHHHHHc
Confidence 999987643 688889888764
No 136
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.42 E-value=3.6e-07 Score=86.75 Aligned_cols=78 Identities=18% Similarity=0.180 Sum_probs=71.6
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+...|..+++.|+|++|+..|++|++ +.|....++.|+|.+|.++|+|++|++.+.+|+
T Consensus 40 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~------------------l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al 101 (477)
T 1wao_1 40 AIYYGNRSLAYLRTECYGYALGDATRAIE------------------LDKKYIKGYYRRAASNMALGKFRAALRDYETVV 101 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------SCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHH------------------hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 45678899999999999999999999999 445567799999999999999999999999999
Q ss_pred HcCCCchHHHHHHHHH
Q 021445 292 RDGDDNVKALFRQGQV 307 (312)
Q Consensus 292 ~l~p~~~Ka~~rrg~a 307 (312)
+++|++..+++..+.+
T Consensus 102 ~~~p~~~~~~~~l~~~ 117 (477)
T 1wao_1 102 KVKPHDKDAKMKYQEC 117 (477)
T ss_dssp HHSTTCTTHHHHHHHH
T ss_pred HhCCCCHHHHHHHHHH
Confidence 9999999999999888
No 137
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=98.42 E-value=4.2e-07 Score=80.46 Aligned_cols=52 Identities=15% Similarity=0.149 Sum_probs=47.0
Q ss_pred HHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHHHHHhhhh
Q 021445 260 RKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 260 ~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l~p~~~Ka~~rrg~a~~~L 311 (312)
.|....++.|+|.|++++|+|++|+..+.++|+++|+++.+|+.+|.++..+
T Consensus 196 ~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~ 247 (291)
T 3mkr_A 196 CSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHL 247 (291)
T ss_dssp SCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 3445678999999999999999999999999999999999999999888654
No 138
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=98.42 E-value=9.9e-07 Score=66.39 Aligned_cols=81 Identities=23% Similarity=0.307 Sum_probs=70.4
Q ss_pred hhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHH
Q 021445 213 DSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMR 292 (312)
Q Consensus 213 ~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~ 292 (312)
..+...|..++..|++++|+..|.++++. .+....++.+++.++..++++++|+..+.+++.
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~------------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 63 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALEL------------------DPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALE 63 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH------------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHc------------------CCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 34667889999999999999999999983 233456788999999999999999999999999
Q ss_pred cCCCchHHHHHHHHHhhhh
Q 021445 293 DGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 293 l~p~~~Ka~~rrg~a~~~L 311 (312)
++|.+..+++..|.++..+
T Consensus 64 ~~~~~~~~~~~l~~~~~~~ 82 (136)
T 2fo7_A 64 LDPRSAEAWYNLGNAYYKQ 82 (136)
T ss_dssp HCTTCHHHHHHHHHHHHTT
T ss_pred HCCCchHHHHHHHHHHHHh
Confidence 9999999999999988654
No 139
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=98.41 E-value=3.1e-07 Score=86.96 Aligned_cols=82 Identities=18% Similarity=0.121 Sum_probs=75.1
Q ss_pred hhhhhHhhhhhHHhhhcH-HHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDY-KMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEF 289 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y-~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~ 289 (312)
.+..+...|..++..++| ++|+..|++|++ +.|....+|.++|.+|+++|+|++|+..+.+
T Consensus 101 ~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~------------------~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~ 162 (474)
T 4abn_A 101 EAQALMLKGKALNVTPDYSPEAEVLLSKAVK------------------LEPELVEAWNQLGEVYWKKGDVTSAHTCFSG 162 (474)
T ss_dssp CHHHHHHHHHHHTSSSSCCHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccccHHHHHHHHHHHHh------------------hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 456788999999999999 999999999999 5566678999999999999999999999999
Q ss_pred HHHcCCCchHHHHHHHHHhhhh
Q 021445 290 AMRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 290 al~l~p~~~Ka~~rrg~a~~~L 311 (312)
+|+++|+ ..+|+.+|.+|..+
T Consensus 163 al~~~p~-~~~~~~lg~~~~~~ 183 (474)
T 4abn_A 163 ALTHCKN-KVSLQNLSMVLRQL 183 (474)
T ss_dssp HHTTCCC-HHHHHHHHHHHTTC
T ss_pred HHhhCCC-HHHHHHHHHHHHHh
Confidence 9999999 79999999998764
No 140
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=98.40 E-value=1.1e-06 Score=70.26 Aligned_cols=48 Identities=10% Similarity=-0.078 Sum_probs=34.0
Q ss_pred HHHHHhHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHHHHHhhh
Q 021445 263 KSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQVSII 310 (312)
Q Consensus 263 ~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l~p~~~Ka~~rrg~a~~~ 310 (312)
...++.++|.++.++|++++|+..+.++++.+|.+..+++..|.++..
T Consensus 109 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 156 (186)
T 3as5_A 109 NFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQ 156 (186)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHH
Confidence 345667777777777777777777777777777777777777776654
No 141
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=98.40 E-value=1e-06 Score=70.37 Aligned_cols=82 Identities=15% Similarity=0.012 Sum_probs=71.2
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
...+...|..++..|++++|+..|.++++. .|....++.++|.++.+++++++|+..+.+++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~------------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~ 103 (186)
T 3as5_A 42 VDVALHLGIAYVKTGAVDRGTELLERSLAD------------------APDNVKVATVLGLTYVQVQKYDLAVPLLIKVA 103 (186)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhc------------------CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 445778888899999999999999999983 34446688999999999999999999999999
Q ss_pred HcCCCchHHHHHHHHHhhhh
Q 021445 292 RDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 292 ~l~p~~~Ka~~rrg~a~~~L 311 (312)
+++|.+..+++..|.++..+
T Consensus 104 ~~~~~~~~~~~~~a~~~~~~ 123 (186)
T 3as5_A 104 EANPINFNVRFRLGVALDNL 123 (186)
T ss_dssp HHCTTCHHHHHHHHHHHHHT
T ss_pred hcCcHhHHHHHHHHHHHHHc
Confidence 99999999999999988764
No 142
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.40 E-value=4.2e-07 Score=68.12 Aligned_cols=64 Identities=9% Similarity=-0.086 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHHHHHhh
Q 021445 230 MALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQVSI 309 (312)
Q Consensus 230 ~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l~p~~~Ka~~rrg~a~~ 309 (312)
+|+..|.++++ ..|....++.++|.+++++|+|++|+..+.++++++|.+..+|+.+|.+|.
T Consensus 3 ~a~~~~~~al~------------------~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~ 64 (115)
T 2kat_A 3 AITERLEAMLA------------------QGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQ 64 (115)
T ss_dssp CHHHHHHHHHT------------------TTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH------------------hCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHH
Confidence 57888999998 344456799999999999999999999999999999999999999999987
Q ss_pred hh
Q 021445 310 IL 311 (312)
Q Consensus 310 ~L 311 (312)
.+
T Consensus 65 ~~ 66 (115)
T 2kat_A 65 GQ 66 (115)
T ss_dssp HH
T ss_pred Hc
Confidence 64
No 143
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.40 E-value=4.9e-07 Score=69.43 Aligned_cols=78 Identities=15% Similarity=0.053 Sum_probs=65.8
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+...|..++..|+|++|+..|.++++ +.|....++.++|.|+.++|++++|+..+.+++
T Consensus 43 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~------------------~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~ 104 (137)
T 3q49_B 43 AVYYTNRALCYLKMQQPEQALADCRRALE------------------LDGQSVKAHFFLGQCQLEMESYDEAIANLQRAY 104 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHH------------------hCchhHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 45578899999999999999999999999 455567799999999999999999999999999
Q ss_pred HcCCC-----chHHHHHHHHH
Q 021445 292 RDGDD-----NVKALFRQGQV 307 (312)
Q Consensus 292 ~l~p~-----~~Ka~~rrg~a 307 (312)
+++|+ +....-....+
T Consensus 105 ~~~p~~~~~~~~~~~~~l~~~ 125 (137)
T 3q49_B 105 SLAKEQRLNFGDDIPSALRIA 125 (137)
T ss_dssp HHHHHTTCCCTTHHHHHHHHH
T ss_pred HHChhHHHHHHHHHHHHHHHH
Confidence 99987 55444444433
No 144
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.37 E-value=8.3e-07 Score=85.59 Aligned_cols=82 Identities=11% Similarity=-0.060 Sum_probs=74.7
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+...|..++..|+|++|+..|++|++ +.|....++.|+|.+|.++|++++|++.+++++
T Consensus 57 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al 118 (568)
T 2vsy_A 57 PEAVARLGRVRWTQQRHAEAAVLLQQASD------------------AAPEHPGIALWLGHALEDAGQAEAAAAAYTRAH 118 (568)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHh------------------cCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 44567889999999999999999999999 445567799999999999999999999999999
Q ss_pred HcCCCchHHHHHHHHHhhhh
Q 021445 292 RDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 292 ~l~p~~~Ka~~rrg~a~~~L 311 (312)
+++|++..+++.+|.++..+
T Consensus 119 ~~~p~~~~~~~~l~~~~~~~ 138 (568)
T 2vsy_A 119 QLLPEEPYITAQLLNWRRRL 138 (568)
T ss_dssp HHCTTCHHHHHHHHHHHHHT
T ss_pred HhCCCCHHHHHHHHHHHHHh
Confidence 99999999999999998765
No 145
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=98.36 E-value=5.9e-07 Score=78.98 Aligned_cols=80 Identities=18% Similarity=0.147 Sum_probs=72.8
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+...|..+++.|++++|+..|+++++ +.|....++.++|.++.++|++++|++.+.+++
T Consensus 236 ~~~~~~la~~~~~~g~~~~A~~~~~~a~~------------------~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 297 (330)
T 3hym_B 236 EPLLNNLGHVCRKLKKYAEALDYHRQALV------------------LIPQNASTYSAIGYIHSLMGNFENAVDYFHTAL 297 (330)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HSTTCSHHHHHHHHHHHHHTCHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHh------------------hCccchHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 44677889999999999999999999999 344456789999999999999999999999999
Q ss_pred HcCCCchHHHHHHHHHhh
Q 021445 292 RDGDDNVKALFRQGQVSI 309 (312)
Q Consensus 292 ~l~p~~~Ka~~rrg~a~~ 309 (312)
+++|++..+++.+|.++.
T Consensus 298 ~~~p~~~~~~~~l~~~~~ 315 (330)
T 3hym_B 298 GLRRDDTFSVTMLGHCIE 315 (330)
T ss_dssp TTCSCCHHHHHHHHHHHH
T ss_pred ccCCCchHHHHHHHHHHH
Confidence 999999999999999984
No 146
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.35 E-value=8.8e-07 Score=77.95 Aligned_cols=90 Identities=11% Similarity=0.062 Sum_probs=73.0
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+...|..++..|+|++|+..|.+|+++....+ + .......++.|+|.+|.++|+|++|+..++++
T Consensus 154 ~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~-----~------~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~ka 222 (293)
T 2qfc_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALH-----D------NEEFDVKVRYNHAKALYLDSRYEESLYQVNKA 222 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC-----C------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcC-----c------cccchHHHHHhHHHHHHHHhhHHHHHHHHHHH
Confidence 456788999999999999999999999998654321 0 11223478999999999999999999999999
Q ss_pred HHcCCC------chHHHHHHHHHhhhh
Q 021445 291 MRDGDD------NVKALFRQGQVSIIL 311 (312)
Q Consensus 291 l~l~p~------~~Ka~~rrg~a~~~L 311 (312)
+++.+. .+.+|+..|.+|..+
T Consensus 223 l~~~~~~~~~~~~~~~~~~lg~~y~~~ 249 (293)
T 2qfc_A 223 IEISCRINSMALIGQLYYQRGECLRKL 249 (293)
T ss_dssp HHHHHHTTBCSSHHHHHHHHHHHHHHT
T ss_pred HHHHHhcCcHHHHHHHHHHHHHHHHHc
Confidence 987643 278999999998765
No 147
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=98.35 E-value=1.3e-06 Score=76.63 Aligned_cols=83 Identities=6% Similarity=-0.078 Sum_probs=74.7
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+...|..++..|+|++|+..|+++++ ..|....++.++|.++.++|++++|+..+.++
T Consensus 20 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~------------------~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a 81 (327)
T 3cv0_A 20 YHENPMEEGLSMLKLANLAEAALAFEAVCQ------------------AAPEREEAWRSLGLTQAENEKDGLAIIALNHA 81 (327)
T ss_dssp GSSCHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhccHHHHHHHHHHHHH------------------hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 456688999999999999999999999998 34445678899999999999999999999999
Q ss_pred HHcCCCchHHHHHHHHHhhhh
Q 021445 291 MRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 291 l~l~p~~~Ka~~rrg~a~~~L 311 (312)
++++|.+..+++.+|.++..+
T Consensus 82 ~~~~~~~~~~~~~la~~~~~~ 102 (327)
T 3cv0_A 82 RMLDPKDIAVHAALAVSHTNE 102 (327)
T ss_dssp HHHCTTCHHHHHHHHHHHHHT
T ss_pred HhcCcCCHHHHHHHHHHHHHc
Confidence 999999999999999998654
No 148
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=98.34 E-value=1.6e-06 Score=72.87 Aligned_cols=80 Identities=21% Similarity=0.154 Sum_probs=47.3
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+...|..+++.|++++|+..|.++++.- +....++.++|.++.++|++++|+..+.+++
T Consensus 57 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~------------------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~ 118 (243)
T 2q7f_A 57 AIPYINFANLLSSVNELERALAFYDKALELD------------------SSAATAYYGAGNVYVVKEMYKEAKDMFEKAL 118 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------------------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC------------------CcchHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 4556778888888889999999888888732 2223344444444444444444444444444
Q ss_pred HcCCCchHHHHHHHHHhh
Q 021445 292 RDGDDNVKALFRQGQVSI 309 (312)
Q Consensus 292 ~l~p~~~Ka~~rrg~a~~ 309 (312)
+++|.+..+++.+|.++.
T Consensus 119 ~~~~~~~~~~~~~a~~~~ 136 (243)
T 2q7f_A 119 RAGMENGDLFYMLGTVLV 136 (243)
T ss_dssp HHTCCSHHHHHHHHHHHH
T ss_pred HhCCCCHHHHHHHHHHHH
Confidence 444444444444444443
No 149
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=98.34 E-value=2.4e-06 Score=75.73 Aligned_cols=83 Identities=17% Similarity=0.107 Sum_probs=62.3
Q ss_pred hHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHcC
Q 021445 215 IKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDG 294 (312)
Q Consensus 215 ~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l~ 294 (312)
....|..+++.|+|++|+..|+++++.... .......++.++|.++.++|++++|+..++++++++
T Consensus 237 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~--------------~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 302 (359)
T 3ieg_A 237 LIESAEELIRDGRYTDATSKYESVMKTEPS--------------VAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQME 302 (359)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCS--------------SHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCC--------------chHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 445688899999999999999999984211 122334567778888888888888888888888888
Q ss_pred CCchHHHHHHHHHhhhh
Q 021445 295 DDNVKALFRQGQVSIIL 311 (312)
Q Consensus 295 p~~~Ka~~rrg~a~~~L 311 (312)
|+++.+|+.+|.++..+
T Consensus 303 ~~~~~~~~~~~~~~~~~ 319 (359)
T 3ieg_A 303 PDNVNALKDRAEAYLIE 319 (359)
T ss_dssp TTCHHHHHHHHHHHHHT
T ss_pred cccHHHHHHHHHHHHHc
Confidence 88888888888877654
No 150
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=98.33 E-value=8.9e-07 Score=75.18 Aligned_cols=82 Identities=17% Similarity=0.061 Sum_probs=52.1
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+...|..++..|+|++|+..|.++++. .+....++.++|.++.+++++++|++.+.++
T Consensus 36 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~------------------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a 97 (252)
T 2ho1_A 36 ARDAYIQLGLGYLQRGNTEQAKVPLRKALEI------------------DPSSADAHAALAVVFQTEMEPKLADEEYRKA 97 (252)
T ss_dssp HHHHHHHHHHHHHHTTCTGGGHHHHHHHHHH------------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHhc------------------CCChHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3566777888888888888888888888773 2223345555666666666666666666666
Q ss_pred HHcCCCchHHHHHHHHHhhh
Q 021445 291 MRDGDDNVKALFRQGQVSII 310 (312)
Q Consensus 291 l~l~p~~~Ka~~rrg~a~~~ 310 (312)
++++|.+..+++.+|.+|..
T Consensus 98 ~~~~~~~~~~~~~la~~~~~ 117 (252)
T 2ho1_A 98 LASDSRNARVLNNYGGFLYE 117 (252)
T ss_dssp HHHCTTCHHHHHHHHHHHHH
T ss_pred HHHCcCcHHHHHHHHHHHHH
Confidence 66666555555555555543
No 151
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=98.33 E-value=1.6e-06 Score=72.79 Aligned_cols=80 Identities=25% Similarity=0.186 Sum_probs=48.3
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
...+...|..++..|++++|+..|.++++.. +....++.++|.+++++|++++|+..+.+++
T Consensus 91 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~------------------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~ 152 (243)
T 2q7f_A 91 ATAYYGAGNVYVVKEMYKEAKDMFEKALRAG------------------MENGDLFYMLGTVLVKLEQPKLALPYLQRAV 152 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT------------------CCSHHHHHHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHHhC------------------CCCHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 3445667778888888888888888888732 1123345555555555555555555555555
Q ss_pred HcCCCchHHHHHHHHHhh
Q 021445 292 RDGDDNVKALFRQGQVSI 309 (312)
Q Consensus 292 ~l~p~~~Ka~~rrg~a~~ 309 (312)
+++|.+..+++.+|.++.
T Consensus 153 ~~~~~~~~~~~~l~~~~~ 170 (243)
T 2q7f_A 153 ELNENDTEARFQFGMCLA 170 (243)
T ss_dssp HHCTTCHHHHHHHHHHHH
T ss_pred HhCCccHHHHHHHHHHHH
Confidence 555555555555555544
No 152
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=98.32 E-value=6.1e-07 Score=81.62 Aligned_cols=99 Identities=18% Similarity=0.109 Sum_probs=65.7
Q ss_pred hhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccc---------cCCCCchhh-------hHHHHHHHHHHhHHHHHHHH
Q 021445 213 DSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWE---------KEGIDEGKS-------SSLRKTKSQIFTNSSACKLK 276 (312)
Q Consensus 213 ~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~---------~~~~~~~~~-------~~~~~~~~~~~~N~a~~~~k 276 (312)
..+...|..+.+.|++++|+..|+++++....... ....+.++. ..+.|....++.+++.++.+
T Consensus 272 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 351 (388)
T 1w3b_A 272 DAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQ 351 (388)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 34566777777777777777777777764211000 000011110 01224456678889999999
Q ss_pred cCCHHHHHHHHHHHHHcCCCchHHHHHHHHHhhhh
Q 021445 277 LGDLKGALLDTEFAMRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 277 l~~~~~Ai~~~~~al~l~p~~~Ka~~rrg~a~~~L 311 (312)
+|++++|+..++++++++|++..+|+.+|.++..+
T Consensus 352 ~g~~~~A~~~~~~a~~~~p~~~~a~~~lg~~~~~~ 386 (388)
T 1w3b_A 352 QGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEM 386 (388)
T ss_dssp TTCCHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHhhCCCCHHHHHhHHHHHHHc
Confidence 99999999999999999999999999998888765
No 153
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=98.30 E-value=1.6e-06 Score=76.12 Aligned_cols=90 Identities=14% Similarity=0.082 Sum_probs=70.2
Q ss_pred hhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHH
Q 021445 213 DSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMR 292 (312)
Q Consensus 213 ~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~ 292 (312)
..+...|..+++.|+|++|+..|+++++......... ..+....++.++|.++.++|++++|+..++++++
T Consensus 194 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~---------~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 264 (330)
T 3hym_B 194 FVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEV---------TVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALV 264 (330)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSC---------TTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccc---------cccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 4456777888888888888888888887542211000 0022345899999999999999999999999999
Q ss_pred cCCCchHHHHHHHHHhhhh
Q 021445 293 DGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 293 l~p~~~Ka~~rrg~a~~~L 311 (312)
++|.+..+|+.+|.++..+
T Consensus 265 ~~~~~~~~~~~la~~~~~~ 283 (330)
T 3hym_B 265 LIPQNASTYSAIGYIHSLM 283 (330)
T ss_dssp HSTTCSHHHHHHHHHHHHH
T ss_pred hCccchHHHHHHHHHHHHh
Confidence 9999999999999999764
No 154
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=98.29 E-value=1.2e-06 Score=75.31 Aligned_cols=95 Identities=14% Similarity=-0.006 Sum_probs=72.9
Q ss_pred hhhhHhhhhhHHh--------hhcHHHHHHHHHHHHHHhhhccccCCCCch----hhhHHHHHHHHHHhHHHHHHHHcCC
Q 021445 212 VDSIKVFGNEHYK--------KQDYKMALRKYRKALRYLDICWEKEGIDEG----KSSSLRKTKSQIFTNSSACKLKLGD 279 (312)
Q Consensus 212 ~~~~k~~Gn~~~~--------~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~N~a~~~~kl~~ 279 (312)
...+...|..+++ .|++++|+..|+++++..... .... ....+.......+.++|.+|+++|+
T Consensus 89 ~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~-----~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~ 163 (261)
T 3qky_A 89 PQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNH-----ELVDDATQKIRELRAKLARKQYEAARLYERREL 163 (261)
T ss_dssp HHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTC-----TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCc-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 3456788999999 999999999999999842111 0000 0112233444556999999999999
Q ss_pred HHHHHHHHHHHHHcCCC---chHHHHHHHHHhhhh
Q 021445 280 LKGALLDTEFAMRDGDD---NVKALFRQGQVSIIL 311 (312)
Q Consensus 280 ~~~Ai~~~~~al~l~p~---~~Ka~~rrg~a~~~L 311 (312)
|++|+..++++++..|+ ...+++++|.+|..+
T Consensus 164 ~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~ 198 (261)
T 3qky_A 164 YEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAY 198 (261)
T ss_dssp HHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHh
Confidence 99999999999999998 568999999999754
No 155
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=98.29 E-value=1.1e-06 Score=79.84 Aligned_cols=98 Identities=16% Similarity=0.094 Sum_probs=54.3
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhcc-----------ccCCCCch-----hhhHHHHHHHHHHhHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICW-----------EKEGIDEG-----KSSSLRKTKSQIFTNSSACKL 275 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~-----------~~~~~~~~-----~~~~~~~~~~~~~~N~a~~~~ 275 (312)
+..+...|..+++.|+|++|+..|+++++.-.... ......+. ......|....++.+++.++.
T Consensus 67 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 146 (388)
T 1w3b_A 67 AEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLK 146 (388)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCTHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 44577889999999999999999999987311100 00000000 001112233344555555555
Q ss_pred HcCCHHHHHHHHHHHHHcCCCchHHHHHHHHHhh
Q 021445 276 KLGDLKGALLDTEFAMRDGDDNVKALFRQGQVSI 309 (312)
Q Consensus 276 kl~~~~~Ai~~~~~al~l~p~~~Ka~~rrg~a~~ 309 (312)
++|++++|++.+.++++++|+++.+|+.+|.++.
T Consensus 147 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 180 (388)
T 1w3b_A 147 ALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFN 180 (388)
T ss_dssp TTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 5555555555555555555555555555555554
No 156
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.28 E-value=2.1e-06 Score=75.66 Aligned_cols=88 Identities=8% Similarity=-0.107 Sum_probs=69.0
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHc-CCHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKL-GDLKGALLDTEFA 290 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl-~~~~~Ai~~~~~a 290 (312)
+..+.+.|+.+.+.|+|++|+.+|++||++..... -......++.|+|.+|.++ |++++|+.++++|
T Consensus 77 a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g------------~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~A 144 (292)
T 1qqe_A 77 GNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRG------------QFRRGANFKFELGEILENDLHDYAKAIDCYELA 144 (292)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcC------------CHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Confidence 55677888888888899999999999888542210 0122356899999999995 9999999999999
Q ss_pred HHcCCCc------hHHHHHHHHHhhhh
Q 021445 291 MRDGDDN------VKALFRQGQVSIIL 311 (312)
Q Consensus 291 l~l~p~~------~Ka~~rrg~a~~~L 311 (312)
|++.|.. ..+|...|.+|..+
T Consensus 145 l~~~~~~~~~~~~~~~~~~lg~~~~~~ 171 (292)
T 1qqe_A 145 GEWYAQDQSVALSNKCFIKCADLKALD 171 (292)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCChHHHHHHHHHHHHHHHHh
Confidence 9998754 56788889888764
No 157
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.28 E-value=2.1e-06 Score=73.46 Aligned_cols=91 Identities=11% Similarity=0.018 Sum_probs=76.4
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+...|..++..|+|++|+..|.+++........ .-.+....++.|+|.++..+|++++|+..+.++
T Consensus 84 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~----------~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 153 (283)
T 3edt_B 84 VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLG----------KFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRA 153 (283)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHC----------TTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcC----------CCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 4556788999999999999999999999996433100 013567889999999999999999999999999
Q ss_pred HHc--------CCCchHHHHHHHHHhhhh
Q 021445 291 MRD--------GDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 291 l~l--------~p~~~Ka~~rrg~a~~~L 311 (312)
+++ +|....+++..|.+|..+
T Consensus 154 l~~~~~~~~~~~~~~~~~~~~la~~~~~~ 182 (283)
T 3edt_B 154 LEIYATRLGPDDPNVAKTKNNLASCYLKQ 182 (283)
T ss_dssp HHHHHHHSCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHc
Confidence 999 888889999999998764
No 158
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.27 E-value=5.8e-06 Score=65.69 Aligned_cols=78 Identities=10% Similarity=0.022 Sum_probs=64.1
Q ss_pred hhhhHhhhhhHHhhh---cHHHHHHHHHHHHHHhhhccccCCCCchhhhHHH-H-HHHHHHhHHHHHHHHcCCHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQ---DYKMALRKYRKALRYLDICWEKEGIDEGKSSSLR-K-TKSQIFTNSSACKLKLGDLKGALLD 286 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~---~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~-~-~~~~~~~N~a~~~~kl~~~~~Ai~~ 286 (312)
.+...+.|-.+.+.+ ++++|+..+++.++ .. | ....+++|+|..|+++++|++|+++
T Consensus 32 ~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~------------------~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y 93 (152)
T 1pc2_A 32 KSTQFEYAWCLVRSKYNDDIRKGIVLLEELLP------------------KGSKEEQRDYVFYLAVGNYRLKEYEKALKY 93 (152)
T ss_dssp HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHH------------------HSCHHHHHHHHHHHHHHHHHTSCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh------------------cCCccchHHHHHHHHHHHHHccCHHHHHHH
Confidence 455667777888766 77788888888887 22 3 4577999999999999999999999
Q ss_pred HHHHHHcCCCchHHHHHHHHH
Q 021445 287 TEFAMRDGDDNVKALFRQGQV 307 (312)
Q Consensus 287 ~~~al~l~p~~~Ka~~rrg~a 307 (312)
|+++|+++|+|..|..-+-.+
T Consensus 94 ~~~lL~ieP~n~QA~~Lk~~i 114 (152)
T 1pc2_A 94 VRGLLQTEPQNNQAKELERLI 114 (152)
T ss_dssp HHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHhcCCCCHHHHHHHHHH
Confidence 999999999999888766544
No 159
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.27 E-value=3.7e-06 Score=77.61 Aligned_cols=82 Identities=17% Similarity=0.105 Sum_probs=63.9
Q ss_pred HhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHcCC
Q 021445 216 KVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGD 295 (312)
Q Consensus 216 k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l~p 295 (312)
...|..+++.|+|++|+..|+++++.... .......++.++|.++.++|++++|+..++++++++|
T Consensus 261 ~~~~~~~~~~g~~~~A~~~~~~~l~~~p~--------------~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p 326 (450)
T 2y4t_A 261 IESAEELIRDGRYTDATSKYESVMKTEPS--------------IAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEP 326 (450)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCCS--------------SHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCCc--------------chHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCc
Confidence 45599999999999999999999984211 1122345778888888888888888888888888888
Q ss_pred CchHHHHHHHHHhhhh
Q 021445 296 DNVKALFRQGQVSIIL 311 (312)
Q Consensus 296 ~~~Ka~~rrg~a~~~L 311 (312)
+++.+|+.+|.++..+
T Consensus 327 ~~~~~~~~l~~~~~~~ 342 (450)
T 2y4t_A 327 DNVNALKDRAEAYLIE 342 (450)
T ss_dssp TCHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHh
Confidence 8888888888887654
No 160
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=98.27 E-value=1.9e-06 Score=73.93 Aligned_cols=83 Identities=14% Similarity=0.029 Sum_probs=67.8
Q ss_pred hhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHc
Q 021445 214 SIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRD 293 (312)
Q Consensus 214 ~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l 293 (312)
.+...|..++..|+|++|+..|.++++. .. -......+|.++|.++.++|++++|+..+.+++++
T Consensus 39 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~-~~--------------~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~ 103 (272)
T 3u4t_A 39 IYNRRAVCYYELAKYDLAQKDIETYFSK-VN--------------ATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDR 103 (272)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHTT-SC--------------TTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHhc-cC--------------chhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhc
Confidence 4667777888888888888888888872 10 01113557899999999999999999999999999
Q ss_pred CCCchHHHHHHHHHhhhh
Q 021445 294 GDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 294 ~p~~~Ka~~rrg~a~~~L 311 (312)
+|.++.+|+.+|.+|..+
T Consensus 104 ~~~~~~~~~~l~~~~~~~ 121 (272)
T 3u4t_A 104 DTTRLDMYGQIGSYFYNK 121 (272)
T ss_dssp STTCTHHHHHHHHHHHHT
T ss_pred CcccHHHHHHHHHHHHHc
Confidence 999999999999998764
No 161
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.26 E-value=3.3e-06 Score=72.17 Aligned_cols=91 Identities=15% Similarity=0.027 Sum_probs=75.7
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+...|..++..|+|++|+..|.++++....... ...+....++.++|.++..+|++++|+..+.++
T Consensus 42 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~----------~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 111 (283)
T 3edt_B 42 VATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLG----------KDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRA 111 (283)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC----------TTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcC----------CcchHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 3555778999999999999999999999996432100 013567889999999999999999999999999
Q ss_pred HHc--------CCCchHHHHHHHHHhhhh
Q 021445 291 MRD--------GDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 291 l~l--------~p~~~Ka~~rrg~a~~~L 311 (312)
+.+ +|....+++..|.+|..+
T Consensus 112 l~~~~~~~~~~~~~~~~~~~~la~~~~~~ 140 (283)
T 3edt_B 112 LEIREKVLGKFHPDVAKQLNNLALLCQNQ 140 (283)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCCChHHHHHHHHHHHHHHHc
Confidence 988 678899999999998764
No 162
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=98.26 E-value=2.8e-06 Score=74.48 Aligned_cols=82 Identities=16% Similarity=0.138 Sum_probs=72.9
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
...+...|..+++.|++++|+..|.++++ ..|....++.++|.++.++|++++|+..+.+++
T Consensus 172 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~------------------~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~ 233 (327)
T 3cv0_A 172 AQLHASLGVLYNLSNNYDSAAANLRRAVE------------------LRPDDAQLWNKLGATLANGNRPQEALDAYNRAL 233 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHH------------------hCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 44567789999999999999999999998 334456689999999999999999999999999
Q ss_pred HcCCCchHHHHHHHHHhhhh
Q 021445 292 RDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 292 ~l~p~~~Ka~~rrg~a~~~L 311 (312)
+++|.+..+++.+|.++..+
T Consensus 234 ~~~~~~~~~~~~l~~~~~~~ 253 (327)
T 3cv0_A 234 DINPGYVRVMYNMAVSYSNM 253 (327)
T ss_dssp HHCTTCHHHHHHHHHHHHHT
T ss_pred HcCCCCHHHHHHHHHHHHHh
Confidence 99999999999999998764
No 163
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.25 E-value=4e-06 Score=76.34 Aligned_cols=89 Identities=16% Similarity=0.186 Sum_probs=75.6
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+...|..+...|+|++|+..|.+|+++.... ...+....++.|+|.||.++|+|++|+..+.+|
T Consensus 183 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~------------~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~a 250 (383)
T 3ulq_A 183 LLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAE------------KQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRA 250 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT------------TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHc------------CChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 35567788999999999999999999999975431 023456779999999999999999999999999
Q ss_pred HH-----cC-CCchHHHHHHHHHhhhh
Q 021445 291 MR-----DG-DDNVKALFRQGQVSIIL 311 (312)
Q Consensus 291 l~-----l~-p~~~Ka~~rrg~a~~~L 311 (312)
++ .+ |..+.+++..|.+|..+
T Consensus 251 l~~~~~~~~~~~~~~~~~~l~~~~~~~ 277 (383)
T 3ulq_A 251 IAVFEESNILPSLPQAYFLITQIHYKL 277 (383)
T ss_dssp HHHHHHTTCGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHhhccchhHHHHHHHHHHHHHHC
Confidence 98 56 88899999999998765
No 164
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.25 E-value=3.5e-06 Score=76.70 Aligned_cols=89 Identities=18% Similarity=0.029 Sum_probs=76.3
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+...|..++..|+|++|+..|.+|+++..... .......++.|+|.||..+|++++|+..+.+|
T Consensus 181 ~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~------------~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~a 248 (378)
T 3q15_A 181 TIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQ------------NDRFIAISLLNIANSYDRSGDDQMAVEHFQKA 248 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcC------------CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 455677899999999999999999999999754310 12356778999999999999999999999999
Q ss_pred HH-----cCCCchHHHHHHHHHhhhh
Q 021445 291 MR-----DGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 291 l~-----l~p~~~Ka~~rrg~a~~~L 311 (312)
+. .+|..+.+++..|.++..+
T Consensus 249 l~~~~~~~~~~~~~~~~~la~~~~~~ 274 (378)
T 3q15_A 249 AKVSREKVPDLLPKVLFGLSWTLCKA 274 (378)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHhhCChhHHHHHHHHHHHHHHC
Confidence 99 8888899999999998764
No 165
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.24 E-value=1.1e-06 Score=71.26 Aligned_cols=72 Identities=8% Similarity=-0.041 Sum_probs=60.3
Q ss_pred hhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHH
Q 021445 213 DSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMR 292 (312)
Q Consensus 213 ~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~ 292 (312)
+.+.+.|..+++.|+|++|+..|+++++ ..|....++.++|.+++++|++++|+..+++++.
T Consensus 7 ~~~~~~a~~~~~~g~~~~A~~~~~~al~------------------~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~ 68 (176)
T 2r5s_A 7 EQLLKQVSELLQQGEHAQALNVIQTLSD------------------ELQSRGDVKLAKADCLLETKQFELAQELLATIPL 68 (176)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHTSCH------------------HHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCG
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------HCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhh
Confidence 4577889999999999999999999998 7788888999999999999999998888877777
Q ss_pred cCCCchHHHHH
Q 021445 293 DGDDNVKALFR 303 (312)
Q Consensus 293 l~p~~~Ka~~r 303 (312)
++| ++..+..
T Consensus 69 ~~p-~~~~~~~ 78 (176)
T 2r5s_A 69 EYQ-DNSYKSL 78 (176)
T ss_dssp GGC-CHHHHHH
T ss_pred ccC-ChHHHHH
Confidence 766 5544433
No 166
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.24 E-value=4.2e-06 Score=64.99 Aligned_cols=89 Identities=13% Similarity=0.142 Sum_probs=63.9
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+...|..++..|+|++|+..|.+++++..... .......++.++|.++..+|++++|+..+.++
T Consensus 8 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~------------~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 75 (164)
T 3ro3_A 8 QGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFG------------DKAAERIAYSNLGNAYIFLGEFETASEYYKKT 75 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT------------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhC------------CchHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 466677888888888899999999998888654310 12334567888888888888888888888888
Q ss_pred HHcCCCc------hHHHHHHHHHhhhh
Q 021445 291 MRDGDDN------VKALFRQGQVSIIL 311 (312)
Q Consensus 291 l~l~p~~------~Ka~~rrg~a~~~L 311 (312)
+.+.+.. ..+++..|.++..+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~l~~~~~~~ 102 (164)
T 3ro3_A 76 LLLARQLKDRAVEAQSCYSLGNTYTLL 102 (164)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCcHHHHHHHHHHHHHHHHH
Confidence 8765432 56777777776543
No 167
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=98.23 E-value=3e-06 Score=71.84 Aligned_cols=99 Identities=18% Similarity=0.107 Sum_probs=59.7
Q ss_pred hhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccc---------cCCCCchhh-------hH--HHHHHHHHHhHHHHHH
Q 021445 213 DSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWE---------KEGIDEGKS-------SS--LRKTKSQIFTNSSACK 274 (312)
Q Consensus 213 ~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~---------~~~~~~~~~-------~~--~~~~~~~~~~N~a~~~ 274 (312)
..+...|..++..|++++|+..|.++++....... ....+.++. .. ..+....++.++|.++
T Consensus 72 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~ 151 (252)
T 2ho1_A 72 DAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVS 151 (252)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHH
Confidence 34566788888888888888888888874211000 000000000 00 1233455667777777
Q ss_pred HHcCCHHHHHHHHHHHHHcCCCchHHHHHHHHHhhhh
Q 021445 275 LKLGDLKGALLDTEFAMRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 275 ~kl~~~~~Ai~~~~~al~l~p~~~Ka~~rrg~a~~~L 311 (312)
+++|++++|+..+.++++++|.+..+++.+|.++..+
T Consensus 152 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~ 188 (252)
T 2ho1_A 152 LQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKE 188 (252)
T ss_dssp HHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHT
T ss_pred HHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHc
Confidence 7777777777777777777777777777777766543
No 168
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.19 E-value=1.3e-06 Score=63.93 Aligned_cols=69 Identities=12% Similarity=0.136 Sum_probs=59.9
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHH--HHHHHhHHHHHHHHc-CCHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKT--KSQIFTNSSACKLKL-GDLKGALLDTE 288 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~N~a~~~~kl-~~~~~Ai~~~~ 288 (312)
...+...|..++..|+|++|+..|+++++. .+. ...++.++|.++.++ +++++|++.+.
T Consensus 40 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~------------------~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~ 101 (112)
T 2kck_A 40 SKYWLMKGKALYNLERYEEAVDCYNYVINV------------------IEDEYNKDVWAAKADALRYIEGKEVEAEIAEA 101 (112)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHT------------------SCCTTCHHHHHHHHHHHTTCSSCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHh------------------CcccchHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 345678899999999999999999999983 233 456899999999999 99999999999
Q ss_pred HHHHcCCCch
Q 021445 289 FAMRDGDDNV 298 (312)
Q Consensus 289 ~al~l~p~~~ 298 (312)
+++..+|...
T Consensus 102 ~~~~~~p~~~ 111 (112)
T 2kck_A 102 RAKLEHHHHH 111 (112)
T ss_dssp HHGGGCCCCC
T ss_pred HHhhcccCCC
Confidence 9999998764
No 169
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=98.18 E-value=4e-06 Score=71.73 Aligned_cols=80 Identities=13% Similarity=-0.009 Sum_probs=68.2
Q ss_pred hhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHcCCCc
Q 021445 218 FGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDN 297 (312)
Q Consensus 218 ~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l~p~~ 297 (312)
.+..+...++|++|+..|.++++.... ..+....++.++|.++..+|++++|+..+.++++++|.+
T Consensus 11 ~~~~~~~~~~~~~A~~~~~~~~~~~~~--------------~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~ 76 (275)
T 1xnf_A 11 LAVPLQPTLQQEVILARMEQILASRAL--------------TDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDM 76 (275)
T ss_dssp SCCCCCCCHHHHHHHHHHHHHHTSSCC--------------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCC
T ss_pred eeeccCccchHHHHHHHHHHHHhcccc--------------cCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCc
Confidence 344556679999999999999983110 245678899999999999999999999999999999999
Q ss_pred hHHHHHHHHHhhhh
Q 021445 298 VKALFRQGQVSIIL 311 (312)
Q Consensus 298 ~Ka~~rrg~a~~~L 311 (312)
+.+|+.+|.++..+
T Consensus 77 ~~~~~~la~~~~~~ 90 (275)
T 1xnf_A 77 PEVFNYLGIYLTQA 90 (275)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHc
Confidence 99999999998764
No 170
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=98.17 E-value=4.9e-06 Score=68.69 Aligned_cols=76 Identities=13% Similarity=0.044 Sum_probs=41.1
Q ss_pred hHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHcC
Q 021445 215 IKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDG 294 (312)
Q Consensus 215 ~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l~ 294 (312)
+...|..+++.|++++|+..|.++++ ..|....++.++|.++.++|++++|+..++++++++
T Consensus 116 ~~~l~~~~~~~~~~~~A~~~~~~~~~------------------~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 177 (225)
T 2vq2_A 116 NLNKGICSAKQGQFGLAEAYLKRSLA------------------AQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRV 177 (225)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH------------------HSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH------------------hCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 44455555555555555555555555 222233455556666666666666666666666666
Q ss_pred C-CchHHHHHHHHHh
Q 021445 295 D-DNVKALFRQGQVS 308 (312)
Q Consensus 295 p-~~~Ka~~rrg~a~ 308 (312)
| .+..++...+.++
T Consensus 178 ~~~~~~~~~~~~~~~ 192 (225)
T 2vq2_A 178 EVLQADDLLLGWKIA 192 (225)
T ss_dssp CSCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHH
Confidence 5 5555555544443
No 171
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.17 E-value=2.4e-06 Score=62.66 Aligned_cols=51 Identities=18% Similarity=0.065 Sum_probs=46.9
Q ss_pred HHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHHHHHhhhh
Q 021445 261 KTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 261 ~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l~p~~~Ka~~rrg~a~~~L 311 (312)
|....++.++|.+++++|+|++|+..++++++++|+++.+|+.+|.+|..+
T Consensus 4 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~ 54 (100)
T 3ma5_A 4 PEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERL 54 (100)
T ss_dssp -CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc
Confidence 445678999999999999999999999999999999999999999999765
No 172
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.16 E-value=3.2e-06 Score=74.38 Aligned_cols=81 Identities=10% Similarity=-0.003 Sum_probs=64.9
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHH--
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEF-- 289 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~-- 289 (312)
...+...|..+...|++++|+..|++++. .+|....++.++|.+++++|++++|+..+.+
T Consensus 117 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~------------------~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~ 178 (287)
T 3qou_A 117 EELXAQQAMQLMQESNYTDALPLLXDAWQ------------------LSNQNGEIGLLLAETLIALNRSEDAEAVLXTIP 178 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSC
T ss_pred hhhHHHHHHHHHhCCCHHHHHHHHHHHHH------------------hCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCc
Confidence 45678999999999999999999999999 5666677888888888888888877655554
Q ss_pred --------------------------------HHHcCCCchHHHHHHHHHhhh
Q 021445 290 --------------------------------AMRDGDDNVKALFRQGQVSII 310 (312)
Q Consensus 290 --------------------------------al~l~p~~~Ka~~rrg~a~~~ 310 (312)
++.++|+++.+++.+|.+|..
T Consensus 179 ~~~p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~ 231 (287)
T 3qou_A 179 LQDQDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQ 231 (287)
T ss_dssp GGGCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred hhhcchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHH
Confidence 456677777777777777754
No 173
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.16 E-value=4.9e-06 Score=73.82 Aligned_cols=87 Identities=13% Similarity=0.037 Sum_probs=64.5
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+.+.|..+.. |+|++|+..|++|+++..... .......++.|+|.+|.++|+|++|+..++++
T Consensus 115 ~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~------------~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 181 (307)
T 2ifu_A 115 AAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEE------------RLRQAAELIGKASRLLVRQQKFDEAAASLQKE 181 (307)
T ss_dssp HHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCC------------ChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 34556677777777 889999999999988643210 11234678999999999999999999999999
Q ss_pred HHcCCCc------hHHHHHHHHHhhh
Q 021445 291 MRDGDDN------VKALFRQGQVSII 310 (312)
Q Consensus 291 l~l~p~~------~Ka~~rrg~a~~~ 310 (312)
+++.|.+ ..+++.+|.+++.
T Consensus 182 l~~~~~~~~~~~~~~~~~~~g~~~~~ 207 (307)
T 2ifu_A 182 KSMYKEMENYPTCYKKCIAQVLVQLH 207 (307)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCChhHHHHHHHHHHHHHHH
Confidence 9876543 3477777777764
No 174
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.12 E-value=1.1e-05 Score=65.87 Aligned_cols=89 Identities=7% Similarity=-0.038 Sum_probs=73.6
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+...|..++..|+|++|+..|.+++.+..... ..+....++.|+|.++..+|++++|+..+.++
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~------------~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 92 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSG------------DHTAEHRALHQVGMVERMAGNWDAARRCFLEE 92 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTC------------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcC------------CcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 466778899999999999999999999999765421 24566789999999999999999999999999
Q ss_pred HHc------CC-CchHHHHHHHHHhhhh
Q 021445 291 MRD------GD-DNVKALFRQGQVSIIL 311 (312)
Q Consensus 291 l~l------~p-~~~Ka~~rrg~a~~~L 311 (312)
+.+ ++ ....+++..|.++..+
T Consensus 93 l~~~~~~~~~~~~~~~~~~~lg~~~~~~ 120 (203)
T 3gw4_A 93 RELLASLPEDPLAASANAYEVATVALHF 120 (203)
T ss_dssp HHHHHHSCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCccHHHHHHHHHHHHHHHHHh
Confidence 988 33 3456788888887654
No 175
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.11 E-value=1.2e-05 Score=62.43 Aligned_cols=88 Identities=16% Similarity=0.055 Sum_probs=70.1
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+...|..++..|+|++|+..|.+++.+..... ..+....++.|+|.++..++++++|+..+.+++
T Consensus 49 ~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~------------~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~ 116 (164)
T 3ro3_A 49 RIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLK------------DRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHL 116 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhC------------CcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 34567889999999999999999999999754321 123457789999999999999999999999999
Q ss_pred HcCC------CchHHHHHHHHHhhhh
Q 021445 292 RDGD------DNVKALFRQGQVSIIL 311 (312)
Q Consensus 292 ~l~p------~~~Ka~~rrg~a~~~L 311 (312)
++.+ ....+++..|.++..+
T Consensus 117 ~~~~~~~~~~~~~~~~~~la~~~~~~ 142 (164)
T 3ro3_A 117 AIAQELKDRIGEGRACWSLGNAYTAL 142 (164)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHccchHhHHHHHHHHHHHHHHc
Confidence 7732 2356788888877653
No 176
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.10 E-value=9.3e-06 Score=75.55 Aligned_cols=90 Identities=11% Similarity=0.025 Sum_probs=70.0
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+...|..++..|+|++|++.|++|++++...... ...+.....|.|+|.+|..+|+|++|+.++++++
T Consensus 51 a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~---------~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~ 121 (472)
T 4g1t_A 51 ATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHAD---------QAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVK 121 (472)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGG---------GCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCcc---------ccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHH
Confidence 4456678999999999999999999999975432110 0123456789999999999999999999999999
Q ss_pred HcC--------CCchHHHHHHHHHhhh
Q 021445 292 RDG--------DDNVKALFRQGQVSII 310 (312)
Q Consensus 292 ~l~--------p~~~Ka~~rrg~a~~~ 310 (312)
++. +..+.++..+|.++..
T Consensus 122 ~i~~~~~~~~~~~~~~~~~~~g~~~~~ 148 (472)
T 4g1t_A 122 HVCEKFSSPYRIESPELDCEEGWTRLK 148 (472)
T ss_dssp HHHHHSCCSSCCCCHHHHHHHHHHHHH
T ss_pred HHhHhcccccchhhHHHHHHHHHHHHH
Confidence 763 3566777777777654
No 177
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=98.07 E-value=5.9e-06 Score=79.23 Aligned_cols=81 Identities=12% Similarity=0.022 Sum_probs=72.7
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+...|..+++.|++++|+..|+++++ +.|....+|.+++.+|.++|++++|++.+++++
T Consensus 516 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~------------------~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l 577 (597)
T 2xpi_A 516 AATWANLGHAYRKLKMYDAAIDALNQGLL------------------LSTNDANVHTAIALVYLHKKIPGLAITHLHESL 577 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HSSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHH------------------hCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 45677889999999999999999999998 344456799999999999999999999999999
Q ss_pred HcCCCchHHHHHHHHHhhh
Q 021445 292 RDGDDNVKALFRQGQVSII 310 (312)
Q Consensus 292 ~l~p~~~Ka~~rrg~a~~~ 310 (312)
+++|++..++..++.+|..
T Consensus 578 ~~~p~~~~~~~~l~~~~~~ 596 (597)
T 2xpi_A 578 AISPNEIMASDLLKRALEE 596 (597)
T ss_dssp HHCTTCHHHHHHHHHTTC-
T ss_pred hcCCCChHHHHHHHHHHhc
Confidence 9999999999999998853
No 178
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.07 E-value=1.7e-05 Score=73.83 Aligned_cols=90 Identities=12% Similarity=-0.048 Sum_probs=70.8
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcC--CHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLG--DLKGALLDTEF 289 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~--~~~~Ai~~~~~ 289 (312)
+..+.+.|..++..|+|++|+..|.+++++......... +....++.|++.++++++ +|++|++++.+
T Consensus 94 ~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~----------~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~k 163 (472)
T 4g1t_A 94 LVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYR----------IESPELDCEEGWTRLKCGGNQNERAKVCFEK 163 (472)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSC----------CCCHHHHHHHHHHHHHHCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccc----------hhhHHHHHHHHHHHHHHccccHHHHHHHHHH
Confidence 334567888999999999999999999997544321111 112457888998888865 69999999999
Q ss_pred HHHcCCCchHHHHHHHHHhhhh
Q 021445 290 AMRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 290 al~l~p~~~Ka~~rrg~a~~~L 311 (312)
||+++|+++.+++..|.++..+
T Consensus 164 al~~~p~~~~~~~~~~~~~~~l 185 (472)
T 4g1t_A 164 ALEKKPKNPEFTSGLAIASYRL 185 (472)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHH
T ss_pred HHHhCCCCHHHHHHHHHHHHHh
Confidence 9999999999999999887543
No 179
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.04 E-value=1.6e-05 Score=69.08 Aligned_cols=91 Identities=11% Similarity=0.005 Sum_probs=75.3
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+...|..++..|+|++|+..|.++++....... ...+....++.++|.++.++|++++|++.+.++
T Consensus 110 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~----------~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a 179 (311)
T 3nf1_A 110 VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLG----------KDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRA 179 (311)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHC----------TTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcC----------CCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3455778899999999999999999999996432100 012566789999999999999999999999999
Q ss_pred HHc--------CCCchHHHHHHHHHhhhh
Q 021445 291 MRD--------GDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 291 l~l--------~p~~~Ka~~rrg~a~~~L 311 (312)
+++ +|....+++..|.+|..+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~la~~~~~~ 208 (311)
T 3nf1_A 180 LEIYQTKLGPDDPNVAKTKNNLASCYLKQ 208 (311)
T ss_dssp HHHHHHTSCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHHHc
Confidence 998 788889999999998764
No 180
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=98.03 E-value=9.3e-06 Score=76.56 Aligned_cols=82 Identities=13% Similarity=-0.019 Sum_probs=64.5
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
...+...|..++..|+|++|+..|+++++ +.|....++.++|.++.++|++++|+..+++++
T Consensus 310 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~------------------~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~ 371 (537)
T 3fp2_A 310 PPTYYHRGQMYFILQDYKNAKEDFQKAQS------------------LNPENVYPYIQLACLLYKQGKFTESEAFFNETK 371 (537)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHH------------------hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 34466778888888888888888888887 333344678888888888888888888888888
Q ss_pred HcCCCchHHHHHHHHHhhhh
Q 021445 292 RDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 292 ~l~p~~~Ka~~rrg~a~~~L 311 (312)
+++|.+..+++.+|.++..+
T Consensus 372 ~~~~~~~~~~~~l~~~~~~~ 391 (537)
T 3fp2_A 372 LKFPTLPEVPTFFAEILTDR 391 (537)
T ss_dssp HHCTTCTHHHHHHHHHHHHT
T ss_pred HhCCCChHHHHHHHHHHHHh
Confidence 88888888888888887654
No 181
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.03 E-value=1.6e-05 Score=69.07 Aligned_cols=91 Identities=10% Similarity=-0.048 Sum_probs=76.4
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+...|..++..|+|++|+..|++++++...... ...+....++.++|.++..+|++++|+..+.++
T Consensus 26 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~----------~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 95 (311)
T 3nf1_A 26 RLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSG----------HDHPDVATMLNILALVYRDQNKYKDAANLLNDA 95 (311)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHC----------SSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 5777899999999999999999999999996543100 013566789999999999999999999999999
Q ss_pred HHc--------CCCchHHHHHHHHHhhhh
Q 021445 291 MRD--------GDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 291 l~l--------~p~~~Ka~~rrg~a~~~L 311 (312)
+.+ +|....+++..|.+|..+
T Consensus 96 l~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 124 (311)
T 3nf1_A 96 LAIREKTLGKDHPAVAATLNNLAVLYGKR 124 (311)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCCCChHHHHHHHHHHHHHHHc
Confidence 987 467788999999988754
No 182
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.03 E-value=1e-05 Score=73.73 Aligned_cols=87 Identities=14% Similarity=0.114 Sum_probs=58.6
Q ss_pred hhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHH
Q 021445 210 NAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEF 289 (312)
Q Consensus 210 ~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~ 289 (312)
..+..+...|..++..|+|++|+..|+++++.-.. -......++.++|.+|..+|+|++|+..+.+
T Consensus 46 ~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~--------------~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 111 (411)
T 4a1s_A 46 SMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTE--------------DLRTLSAIYSQLGNAYFYLGDYNKAMQYHKH 111 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS--------------CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccc--------------ChhHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 45677888999999999999999999999984111 1122334566666666666666666666666
Q ss_pred HHHc------CCCchHHHHHHHHHhhh
Q 021445 290 AMRD------GDDNVKALFRQGQVSII 310 (312)
Q Consensus 290 al~l------~p~~~Ka~~rrg~a~~~ 310 (312)
++++ +|....+++.+|.+|..
T Consensus 112 al~~~~~~~~~~~~~~~~~~l~~~~~~ 138 (411)
T 4a1s_A 112 DLTLAKSMNDRLGEAKSSGNLGNTLKV 138 (411)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCchHHHHHHHHHHHHHHH
Confidence 6655 45555666666666544
No 183
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.01 E-value=1.6e-05 Score=72.19 Aligned_cols=90 Identities=11% Similarity=0.031 Sum_probs=71.8
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+...|..++..|+|.+|+..|.+|+++..... ...+....++.|+|.+|..+|+|++|+..+.+|
T Consensus 142 ~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~-----------~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 210 (383)
T 3ulq_A 142 KAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHE-----------AYNIRLLQCHSLFATNFLDLKQYEDAISHFQKA 210 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCS-----------TTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCc-----------cchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 456677888888888899999999999988654320 014556789999999999999999999999999
Q ss_pred HHcCCCc------hHHHHHHHHHhhhh
Q 021445 291 MRDGDDN------VKALFRQGQVSIIL 311 (312)
Q Consensus 291 l~l~p~~------~Ka~~rrg~a~~~L 311 (312)
+++.+.. +.+++..|.+|..+
T Consensus 211 l~~~~~~~~~~~~~~~~~~lg~~y~~~ 237 (383)
T 3ulq_A 211 YSMAEAEKQPQLMGRTLYNIGLCKNSQ 237 (383)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHcCChHHHHHHHHHHHHHHHHC
Confidence 9885533 35899999988764
No 184
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.00 E-value=1.4e-05 Score=77.37 Aligned_cols=82 Identities=10% Similarity=-0.035 Sum_probs=68.7
Q ss_pred hhhhHhhhhhHHhhhc----------HHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcC--C
Q 021445 212 VDSIKVFGNEHYKKQD----------YKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLG--D 279 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~----------y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~--~ 279 (312)
...|..+|..+.+.++ |++|+..|.++|+ .+|....+|.+|+.++.+++ +
T Consensus 63 ~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~------------------~~pK~y~aW~hR~w~l~~l~~~~ 124 (567)
T 1dce_A 63 ATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLR------------------VNPKSYGTWHHRCWLLSRLPEPN 124 (567)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHTCSSCC
T ss_pred HHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHH------------------hCCCCHHHHHHHHHHHHHccccc
Confidence 3446677888888777 9999999999998 66777888999999999988 6
Q ss_pred HHHHHHHHHHHHHcCCCchHHHHHHHHHhhhh
Q 021445 280 LKGALLDTEFAMRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 280 ~~~Ai~~~~~al~l~p~~~Ka~~rrg~a~~~L 311 (312)
|++|++.|+++|++||.|..||+.|+.++..+
T Consensus 125 ~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l 156 (567)
T 1dce_A 125 WARELELCARFLEADERNFHCWDYRRFVAAQA 156 (567)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhhccccccHHHHHHHHHHHc
Confidence 78999999999999999999998888887654
No 185
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.00 E-value=1.1e-05 Score=70.94 Aligned_cols=101 Identities=7% Similarity=-0.135 Sum_probs=74.8
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhh-----------ccccCCCCc-----hhhhHHHHHHHHHHhHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDI-----------CWEKEGIDE-----GKSSSLRKTKSQIFTNSSACK 274 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~-----------~~~~~~~~~-----~~~~~~~~~~~~~~~N~a~~~ 274 (312)
.+..+...|..+...|++++|+..|++++..-.. ........+ +......|....++.|+|.++
T Consensus 150 ~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l 229 (287)
T 3qou_A 150 NGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQL 229 (287)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHH
Confidence 3456788888899999999999888887542100 000000010 111234667788999999999
Q ss_pred HHcCCHHHHHHHHHHHHHcCCCc--hHHHHHHHHHhhhh
Q 021445 275 LKLGDLKGALLDTEFAMRDGDDN--VKALFRQGQVSIIL 311 (312)
Q Consensus 275 ~kl~~~~~Ai~~~~~al~l~p~~--~Ka~~rrg~a~~~L 311 (312)
.++|++++|+..+.++|+++|++ ..++.+.+.++..+
T Consensus 230 ~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~ 268 (287)
T 3qou_A 230 HQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAAL 268 (287)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHH
T ss_pred HHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHc
Confidence 99999999999999999999999 88999999988764
No 186
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=97.97 E-value=2e-05 Score=71.76 Aligned_cols=88 Identities=17% Similarity=0.112 Sum_probs=75.0
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+...|..++..|+|++|+..|.+++++..... ..+....++.++|.+|..+|++++|+..+.+++
T Consensus 86 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~------------~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 153 (411)
T 4a1s_A 86 SAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMN------------DRLGEAKSSGNLGNTLKVMGRFDEAAICCERHL 153 (411)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcc------------CchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 45577899999999999999999999999643310 146778899999999999999999999999999
Q ss_pred Hc------CCCchHHHHHHHHHhhhh
Q 021445 292 RD------GDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 292 ~l------~p~~~Ka~~rrg~a~~~L 311 (312)
++ .+....+++.+|.+|..+
T Consensus 154 ~~~~~~~~~~~~~~~~~~l~~~~~~~ 179 (411)
T 4a1s_A 154 TLARQLGDRLSEGRALYNLGNVYHAK 179 (411)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhchHHHHHHHHHHHHHHHHc
Confidence 88 677888999999988753
No 187
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=97.96 E-value=2e-06 Score=75.57 Aligned_cols=68 Identities=18% Similarity=0.127 Sum_probs=61.4
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+...|..+++.|+|++|+..|++|++ +.|....++.++|.+|.++|+|++|+..+.+++
T Consensus 38 ~~~~~~la~~~~~~~~~~~A~~~~~~al~------------------~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 99 (281)
T 2c2l_A 38 AVYYTNRALCYLKMQQPEQALADCRRALE------------------LDGQSVKAHFFLGQCQLEMESYDEAIANLQRAY 99 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTT------------------SCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHH------------------hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 45578899999999999999999999999 445567799999999999999999999999999
Q ss_pred HcCCCc
Q 021445 292 RDGDDN 297 (312)
Q Consensus 292 ~l~p~~ 297 (312)
+++|++
T Consensus 100 ~l~p~~ 105 (281)
T 2c2l_A 100 SLAKEQ 105 (281)
T ss_dssp HHHHHT
T ss_pred HhCccc
Confidence 999865
No 188
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=97.96 E-value=1.9e-05 Score=68.92 Aligned_cols=84 Identities=18% Similarity=0.082 Sum_probs=44.5
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+...|..++..|+|++|+..|+++++.-.. -......++.++|.++..+|++++|+..+.+++
T Consensus 5 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~--------------~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 70 (338)
T 3ro2_A 5 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTE--------------DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDL 70 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS--------------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcc--------------cHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 345566677777777777777777777763110 011223345555555555555555555555555
Q ss_pred Hc------CCCchHHHHHHHHHhh
Q 021445 292 RD------GDDNVKALFRQGQVSI 309 (312)
Q Consensus 292 ~l------~p~~~Ka~~rrg~a~~ 309 (312)
.+ .|..+.+++..|.++.
T Consensus 71 ~~~~~~~~~~~~~~~~~~l~~~~~ 94 (338)
T 3ro2_A 71 TLARTIGDQLGEAKASGNLGNTLK 94 (338)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHhhcccccHHHHHHHHHHHHHHH
Confidence 44 3333444444444443
No 189
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=97.93 E-value=2e-05 Score=71.21 Aligned_cols=85 Identities=18% Similarity=0.085 Sum_probs=48.1
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+...|..+++.|+|++|+..|+++++.-.. -......++.++|.++..+|+|++|+..+.++
T Consensus 8 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~--------------~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 73 (406)
T 3sf4_A 8 SCLELALEGERLCKSGDCRAGVSFFEAAVQVGTE--------------DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHD 73 (406)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS--------------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc--------------cHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 3455667777778888888888888887774111 01122345555555555555555555555555
Q ss_pred HHc------CCCchHHHHHHHHHhh
Q 021445 291 MRD------GDDNVKALFRQGQVSI 309 (312)
Q Consensus 291 l~l------~p~~~Ka~~rrg~a~~ 309 (312)
+.+ .|..+.+++.+|.++.
T Consensus 74 l~~~~~~~~~~~~~~~~~~la~~~~ 98 (406)
T 3sf4_A 74 LTLARTIGDQLGEAKASGNLGNTLK 98 (406)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccccHHHHHHHHHHHHHHH
Confidence 544 2334445555555544
No 190
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=97.92 E-value=1.3e-05 Score=67.54 Aligned_cols=74 Identities=11% Similarity=0.037 Sum_probs=59.4
Q ss_pred hhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHH----------------
Q 021445 213 DSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLK---------------- 276 (312)
Q Consensus 213 ~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~k---------------- 276 (312)
..+...|..+++.|+|++|+..|+++++.... + +....++.++|.|+.+
T Consensus 42 ~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~-------~--------~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~ 106 (225)
T 2yhc_A 42 QVQLDLIYAYYKNADLPLAQAAIDRFIRLNPT-------H--------PNIDYVMYMRGLTNMALDDSALQGFFGVDRSD 106 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-------C--------TTHHHHHHHHHHHHHHHHC-------------
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcC-------C--------CcHHHHHHHHHHHHHhhhhhhhhhhhccchhh
Confidence 45778899999999999999999999984211 1 1123367788888876
Q ss_pred --cCCHHHHHHHHHHHHHcCCCchHHH
Q 021445 277 --LGDLKGALLDTEFAMRDGDDNVKAL 301 (312)
Q Consensus 277 --l~~~~~Ai~~~~~al~l~p~~~Ka~ 301 (312)
++++++|+..+.++++.+|++..++
T Consensus 107 ~~~~~~~~A~~~~~~~l~~~P~~~~a~ 133 (225)
T 2yhc_A 107 RDPQQARAAFSDFSKLVRGYPNSQYTT 133 (225)
T ss_dssp -CCHHHHHHHHHHHHHHTTCTTCTTHH
T ss_pred cCcHHHHHHHHHHHHHHHHCcCChhHH
Confidence 5789999999999999999998665
No 191
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=97.91 E-value=1.8e-05 Score=73.94 Aligned_cols=79 Identities=15% Similarity=0.126 Sum_probs=59.4
Q ss_pred hHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHH------HHHHhHHHHHHHH---cCCHHHHHH
Q 021445 215 IKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTK------SQIFTNSSACKLK---LGDLKGALL 285 (312)
Q Consensus 215 ~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~------~~~~~N~a~~~~k---l~~~~~Ai~ 285 (312)
+...|..+++.|+|++|+..|.+++.. .+.. ..++.++|.++++ +|++++|+.
T Consensus 375 ~~~la~~~~~~~~~~~A~~~~~~a~~~------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~ 436 (514)
T 2gw1_A 375 PNFFAEILTDKNDFDKALKQYDLAIEL------------------ENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATN 436 (514)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH------------------HHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHh------------------hhccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHH
Confidence 445566666666666666666666662 2222 2278899999999 999999999
Q ss_pred HHHHHHHcCCCchHHHHHHHHHhhhh
Q 021445 286 DTEFAMRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 286 ~~~~al~l~p~~~Ka~~rrg~a~~~L 311 (312)
.+.+++.++|++..+++.+|.+|..+
T Consensus 437 ~~~~a~~~~~~~~~~~~~la~~~~~~ 462 (514)
T 2gw1_A 437 LLEKASKLDPRSEQAKIGLAQMKLQQ 462 (514)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCcccHHHHHHHHHHHHHh
Confidence 99999999999999999999888654
No 192
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=97.91 E-value=1.6e-05 Score=70.50 Aligned_cols=85 Identities=12% Similarity=-0.060 Sum_probs=56.1
Q ss_pred hhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHc
Q 021445 214 SIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRD 293 (312)
Q Consensus 214 ~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l 293 (312)
.+.+.|+.+.+.|+|++|+..|++|+++.... . .......++.|+|.+|.+ ++|++|+..+.+||.+
T Consensus 78 ~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~-----g-------~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~ 144 (307)
T 2ifu_A 78 AFEQAGMMLKDLQRMPEAVQYIEKASVMYVEN-----G-------TPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAV 144 (307)
T ss_dssp HHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTT-----T-------CHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHc-----C-------CHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHH
Confidence 34455555555566666666666666543210 0 012345678889999988 9999999999999987
Q ss_pred CCCc------hHHHHHHHHHhhhh
Q 021445 294 GDDN------VKALFRQGQVSIIL 311 (312)
Q Consensus 294 ~p~~------~Ka~~rrg~a~~~L 311 (312)
.|.. ..+|...|.+|..+
T Consensus 145 ~~~~~~~~~~~~~~~~lg~~~~~~ 168 (307)
T 2ifu_A 145 FENEERLRQAAELIGKASRLLVRQ 168 (307)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHhCCChhHHHHHHHHHHHHHHHc
Confidence 7643 57788888887654
No 193
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=97.90 E-value=1.9e-05 Score=75.16 Aligned_cols=99 Identities=9% Similarity=-0.023 Sum_probs=77.5
Q ss_pred CChhhhhhhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHH
Q 021445 203 NELSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKG 282 (312)
Q Consensus 203 ~~~~~~~~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~ 282 (312)
+.+...++.+..+.+++..+..+|+|++|+..|+++|+..... . ..-.+.....+.|+|.+|..+|+|++
T Consensus 300 e~v~~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~-----l-----g~~Hp~~a~~~~nLa~~y~~~g~~~e 369 (490)
T 3n71_A 300 EVVKEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPV-----F-----ADTNLYVLRLLSIASEVLSYLQAYEE 369 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTT-----B-----CTTSHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHh-----c-----CCCCHHHHHHHHHHHHHHHHhcCHHH
Confidence 3445556667777888888999999999999999999965331 1 11246678899999999999999999
Q ss_pred HHHHHHHHHHc-----C---CCchHHHHHHHHHhhhh
Q 021445 283 ALLDTEFAMRD-----G---DDNVKALFRQGQVSIIL 311 (312)
Q Consensus 283 Ai~~~~~al~l-----~---p~~~Ka~~rrg~a~~~L 311 (312)
|+..+.++|.+ . |.-+.+|.+.|.+|..+
T Consensus 370 A~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~ 406 (490)
T 3n71_A 370 ASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHA 406 (490)
T ss_dssp HHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHC
Confidence 99999999954 2 44457888888888653
No 194
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=97.89 E-value=2.1e-05 Score=63.47 Aligned_cols=100 Identities=6% Similarity=-0.124 Sum_probs=72.8
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhh---------hcc-cc-CCCCc-----hhhhHHHHHHHHHHhHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLD---------ICW-EK-EGIDE-----GKSSSLRKTKSQIFTNSSACKL 275 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~---------~~~-~~-~~~~~-----~~~~~~~~~~~~~~~N~a~~~~ 275 (312)
+..+...|..+.+.|++++|+..|++++..-. ... .. ....+ +....+.|....++.++|.++.
T Consensus 40 ~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~ 119 (176)
T 2r5s_A 40 GDVKLAKADCLLETKQFELAQELLATIPLEYQDNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACELAVQYN 119 (176)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHhhhccCChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 45577889999999999999999988765311 000 00 00000 0111245666789999999999
Q ss_pred HcCCHHHHHHHHHHHHHcCCCc--hHHHHHHHHHhhhh
Q 021445 276 KLGDLKGALLDTEFAMRDGDDN--VKALFRQGQVSIIL 311 (312)
Q Consensus 276 kl~~~~~Ai~~~~~al~l~p~~--~Ka~~rrg~a~~~L 311 (312)
++|++++|+..+.++++++|.+ ..+++..|.++..+
T Consensus 120 ~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~ 157 (176)
T 2r5s_A 120 QVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSAL 157 (176)
T ss_dssp HTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHH
T ss_pred HcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHh
Confidence 9999999999999999999986 56999999888754
No 195
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=97.87 E-value=5.2e-05 Score=67.64 Aligned_cols=74 Identities=15% Similarity=0.022 Sum_probs=65.4
Q ss_pred hhhhhHHhhhcH-HHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcC--CHHHHHHHHHHHHHc
Q 021445 217 VFGNEHYKKQDY-KMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLG--DLKGALLDTEFAMRD 293 (312)
Q Consensus 217 ~~Gn~~~~~~~y-~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~--~~~~Ai~~~~~al~l 293 (312)
..-.+..+.+.| ++|+..+.++|. ++|....++++|+.++..++ +++++++.++++|.+
T Consensus 37 ~~~~a~~~~~e~s~~aL~~t~~~L~------------------~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~ 98 (306)
T 3dra_A 37 GLLLALMKAEEYSERALHITELGIN------------------ELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALD 98 (306)
T ss_dssp HHHHHHHHTTCCSHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHHH------------------HCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHH
Confidence 333344444555 689999999999 78889999999999999999 999999999999999
Q ss_pred CCCchHHHHHHHHHh
Q 021445 294 GDDNVKALFRQGQVS 308 (312)
Q Consensus 294 ~p~~~Ka~~rrg~a~ 308 (312)
+|++..+|+.|+.++
T Consensus 99 nPk~y~aW~~R~~iL 113 (306)
T 3dra_A 99 NEKNYQIWNYRQLII 113 (306)
T ss_dssp CTTCCHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHH
Confidence 999999999999998
No 196
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=97.86 E-value=4.2e-05 Score=68.98 Aligned_cols=88 Identities=14% Similarity=0.157 Sum_probs=67.6
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+...|..++..|+|++|+..|.+++++..... .......++.|+|.++.++|++++|+..+.+++
T Consensus 187 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~------------~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 254 (406)
T 3sf4_A 187 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFG------------DKAAERRAYSNLGNAYIFLGEFETASEYYKKTL 254 (406)
T ss_dssp HHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcC------------CcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHH
Confidence 33467789999999999999999999999754321 123445688888888888888888888888888
Q ss_pred HcCCCc------hHHHHHHHHHhhhh
Q 021445 292 RDGDDN------VKALFRQGQVSIIL 311 (312)
Q Consensus 292 ~l~p~~------~Ka~~rrg~a~~~L 311 (312)
.+.+.. ..+++..|.+|..+
T Consensus 255 ~~~~~~~~~~~~~~~~~~la~~~~~~ 280 (406)
T 3sf4_A 255 LLARQLKDRAVEAQSCYSLGNTYTLL 280 (406)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhCcCchHHHHHHHHHHHHHHHh
Confidence 776655 67777888777653
No 197
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=97.84 E-value=3.8e-05 Score=56.14 Aligned_cols=48 Identities=13% Similarity=0.017 Sum_probs=45.2
Q ss_pred HHHHhHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHHHHHhhhh
Q 021445 264 SQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 264 ~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l~p~~~Ka~~rrg~a~~~L 311 (312)
...+.++|.+++++|+|++|+..++++++++|.++.+|+.+|.+|..+
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~ 51 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKL 51 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Confidence 457899999999999999999999999999999999999999999765
No 198
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.84 E-value=6.1e-05 Score=64.84 Aligned_cols=96 Identities=15% Similarity=0.006 Sum_probs=47.8
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhcc--------ccC----CCCchhhhH-----HHHHHHHHHhHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICW--------EKE----GIDEGKSSS-----LRKTKSQIFTNSSACK 274 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~--------~~~----~~~~~~~~~-----~~~~~~~~~~N~a~~~ 274 (312)
+..+...|..++..+++++|+..|+++++. .... -.. ..+.++... +......++.++|.+|
T Consensus 6 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~-~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~ 84 (273)
T 1ouv_A 6 PKELVGLGAKSYKEKDFTQAKKYFEKACDL-KENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLY 84 (273)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHC-CCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 344566677777777777777777777651 0000 000 000000000 0011334555666666
Q ss_pred HH----cCCHHHHHHHHHHHHHcCCCchHHHHHHHHHhhh
Q 021445 275 LK----LGDLKGALLDTEFAMRDGDDNVKALFRQGQVSII 310 (312)
Q Consensus 275 ~k----l~~~~~Ai~~~~~al~l~p~~~Ka~~rrg~a~~~ 310 (312)
.. .+++++|+..+.++++++ ++.+++..|.+|..
T Consensus 85 ~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~ 122 (273)
T 1ouv_A 85 YSGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYHD 122 (273)
T ss_dssp HHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHH
T ss_pred hCCCCcccCHHHHHHHHHHHHHcC--CccHHHHHHHHHHc
Confidence 66 666666666666666553 55566666655543
No 199
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=97.84 E-value=3.1e-05 Score=74.98 Aligned_cols=85 Identities=11% Similarity=0.012 Sum_probs=70.5
Q ss_pred hhhhhhhHhhhhhHHhhhcH-HHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCC--------
Q 021445 209 MNAVDSIKVFGNEHYKKQDY-KMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGD-------- 279 (312)
Q Consensus 209 ~~~~~~~k~~Gn~~~~~~~y-~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~-------- 279 (312)
++.-..+.....++.+.++| ++|++.|.++|. ++|....+|.+|+.++.++++
T Consensus 25 ~~~y~~~~~~~~~~~~~~~~~eeal~~~~~~l~------------------~nP~~~taW~~R~~~l~~l~~~~~~~~~~ 86 (567)
T 1dce_A 25 LKLYQSATQAVFQKRQAGELDESVLELTSQILG------------------ANPDFATLWNCRREVLQHLETEKSPEESA 86 (567)
T ss_dssp HHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH------------------HCchhHHHHHHHHHHHHhcccccchhhhh
Confidence 33333444444445555555 678999999999 788899999999999999998
Q ss_pred --HHHHHHHHHHHHHcCCCchHHHHHHHHHhhhh
Q 021445 280 --LKGALLDTEFAMRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 280 --~~~Ai~~~~~al~l~p~~~Ka~~rrg~a~~~L 311 (312)
+++|++.+++||+.+|++..||+.|+.++..+
T Consensus 87 ~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l 120 (567)
T 1dce_A 87 ALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRL 120 (567)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTC
T ss_pred hhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 99999999999999999999999999998765
No 200
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=97.79 E-value=5.1e-05 Score=72.64 Aligned_cols=79 Identities=11% Similarity=-0.057 Sum_probs=44.3
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+...|..+++.|++++|+..|.++++. .|....+|.+++.+|.+.|++++|++.+++++
T Consensus 373 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~------------------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~ 434 (597)
T 2xpi_A 373 AVTWLAVGIYYLCVNKISEARRYFSKSSTM------------------DPQFGPAWIGFAHSFAIEGEHDQAISAYTTAA 434 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHh------------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 334556677778888888888888888762 22223344444444444444444444444444
Q ss_pred HcCCCchHHHHHHHHHh
Q 021445 292 RDGDDNVKALFRQGQVS 308 (312)
Q Consensus 292 ~l~p~~~Ka~~rrg~a~ 308 (312)
+++|.+..+|+.+|.+|
T Consensus 435 ~~~~~~~~~~~~l~~~~ 451 (597)
T 2xpi_A 435 RLFQGTHLPYLFLGMQH 451 (597)
T ss_dssp HTTTTCSHHHHHHHHHH
T ss_pred HhCccchHHHHHHHHHH
Confidence 44444444444444444
No 201
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.77 E-value=5.6e-05 Score=70.73 Aligned_cols=96 Identities=8% Similarity=-0.011 Sum_probs=72.0
Q ss_pred hhhhhhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHH
Q 021445 206 SWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALL 285 (312)
Q Consensus 206 ~~~~~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~ 285 (312)
...+..+....+++...-..|+|++|+..|+++|+..... . ..-.+.....+.|+|.+|..+|+|++|+.
T Consensus 292 ~~~~~~~~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~-----l-----g~~Hp~~a~~~~nLa~~y~~~g~~~eA~~ 361 (433)
T 3qww_A 292 RDMVRYARNVIEEFRRAKHYKSPSELLEICELSQEKMSSV-----F-----EDSNVYMLHMMYQAMGVCLYMQDWEGALK 361 (433)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTT-----B-----CTTSHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCc-----c-----ChhchHHHHHHHHHHHHHHhhcCHHHHHH
Confidence 3334444555566666667789999999999999964331 1 11246678899999999999999999999
Q ss_pred HHHHHHHc--------CCCchHHHHHHHHHhhhh
Q 021445 286 DTEFAMRD--------GDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 286 ~~~~al~l--------~p~~~Ka~~rrg~a~~~L 311 (312)
.+.++|.+ .|.-+..|.+.|.+|..+
T Consensus 362 ~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~q 395 (433)
T 3qww_A 362 YGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGL 395 (433)
T ss_dssp HHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhc
Confidence 99999954 345557888888888654
No 202
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=97.77 E-value=7.6e-05 Score=64.96 Aligned_cols=88 Identities=17% Similarity=0.160 Sum_probs=72.1
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+...|..++..|+|++|+..|.+++.+.... ...+....++.++|.++..+|++++|+..+.+++
T Consensus 43 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~------------~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 110 (338)
T 3ro2_A 43 SAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTI------------GDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHL 110 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH------------TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcc------------cccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 5567889999999999999999999999964331 0245667899999999999999999999999999
Q ss_pred HcCCCc------hHHHHHHHHHhhhh
Q 021445 292 RDGDDN------VKALFRQGQVSIIL 311 (312)
Q Consensus 292 ~l~p~~------~Ka~~rrg~a~~~L 311 (312)
++.+.. ..+++..|.++..+
T Consensus 111 ~~~~~~~~~~~~~~~~~~l~~~~~~~ 136 (338)
T 3ro2_A 111 DISRELNDKVGEARALYNLGNVYHAK 136 (338)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCchHHHHHHHHHHHHHHHc
Confidence 886543 44888888887653
No 203
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=97.76 E-value=5.4e-05 Score=67.50 Aligned_cols=29 Identities=7% Similarity=-0.301 Sum_probs=24.9
Q ss_pred hhhhHhhhhhHHhhh--cHHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQ--DYKMALRKYRKALR 240 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~--~y~~A~~~Y~kal~ 240 (312)
...+..+|..+...+ ++++|+..+.++|.
T Consensus 67 ~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~ 97 (306)
T 3dra_A 67 YTIWIYRFNILKNLPNRNLYDELDWCEEIAL 97 (306)
T ss_dssp HHHHHHHHHHHHTCTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccccHHHHHHHHHHHHH
Confidence 444678888888888 99999999999997
No 204
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=97.75 E-value=6.7e-05 Score=68.09 Aligned_cols=90 Identities=10% Similarity=-0.090 Sum_probs=67.2
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+...|..++..|++.+|+..|.+|+++..... ...+....++.|+|.+|..+|+|++|++.+.+|
T Consensus 140 ~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~-----------~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~a 208 (378)
T 3q15_A 140 KAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHP-----------LYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAA 208 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTST-----------TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCC-----------CchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 455566677777777778888888887777643310 013356789999999999999999999999999
Q ss_pred HHcCC------CchHHHHHHHHHhhhh
Q 021445 291 MRDGD------DNVKALFRQGQVSIIL 311 (312)
Q Consensus 291 l~l~p------~~~Ka~~rrg~a~~~L 311 (312)
+++.+ ....+++..|.+|..+
T Consensus 209 l~~~~~~~~~~~~~~~~~~lg~~y~~~ 235 (378)
T 3q15_A 209 LELAMDIQNDRFIAISLLNIANSYDRS 235 (378)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHC
Confidence 98632 2356888889888754
No 205
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=97.72 E-value=9.7e-05 Score=51.82 Aligned_cols=50 Identities=18% Similarity=0.189 Sum_probs=46.3
Q ss_pred HHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHHHHHhhhh
Q 021445 262 TKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 262 ~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l~p~~~Ka~~rrg~a~~~L 311 (312)
....++.++|.+++++++|++|+..+.++++++|.+..+++.+|.++..+
T Consensus 7 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~ 56 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQ 56 (91)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999999999999998764
No 206
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.71 E-value=6.3e-05 Score=54.67 Aligned_cols=68 Identities=10% Similarity=0.029 Sum_probs=60.3
Q ss_pred hhhhHhhhhhHHhhhc---HHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQD---YKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTE 288 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~---y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~ 288 (312)
+..+...|..++..++ ..+|...+.+||. ++|....++..+|..+++.|+|++|+..+.
T Consensus 6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~------------------~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~ 67 (93)
T 3bee_A 6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQ------------------LEPYNEAALSLIANDHFISFRFQEAIDTWV 67 (93)
T ss_dssp HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHH------------------HCcCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 4567788888875555 7999999999999 788889999999999999999999999999
Q ss_pred HHHHcCCCc
Q 021445 289 FAMRDGDDN 297 (312)
Q Consensus 289 ~al~l~p~~ 297 (312)
++|+.+|..
T Consensus 68 ~~l~~~p~~ 76 (93)
T 3bee_A 68 LLLDSNDPN 76 (93)
T ss_dssp HHHTCCCTT
T ss_pred HHHhhCCCC
Confidence 999999973
No 207
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=97.69 E-value=5.9e-05 Score=66.46 Aligned_cols=72 Identities=10% Similarity=-0.043 Sum_probs=62.7
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHH-HHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKG-ALLDTEFA 290 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~-Ai~~~~~a 290 (312)
+..+...|..+.+.|+|++|...|++||+ ++|....++.|++.++..+|++.+ +.+..+++
T Consensus 200 ~~~~~~la~~~~~~g~~~eA~~~l~~al~------------------~~p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~ 261 (291)
T 3mkr_A 200 LLLLNGQAACHMAQGRWEAAEGVLQEALD------------------KDSGHPETLINLVVLSQHLGKPPEVTNRYLSQL 261 (291)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------hCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 34567889999999999999999999999 667778899999999999999987 56888999
Q ss_pred HHcCCCchHHH
Q 021445 291 MRDGDDNVKAL 301 (312)
Q Consensus 291 l~l~p~~~Ka~ 301 (312)
++++|+++.+.
T Consensus 262 ~~~~P~~~~~~ 272 (291)
T 3mkr_A 262 KDAHRSHPFIK 272 (291)
T ss_dssp HHHCTTCHHHH
T ss_pred HHhCCCChHHH
Confidence 99999998644
No 208
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.66 E-value=7.3e-05 Score=69.92 Aligned_cols=73 Identities=10% Similarity=0.007 Sum_probs=61.0
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+.+.|..+..+|+|++|+..|+++|+.....- ..-.|.....|+|+|..|..+|+|++|+..+.+|
T Consensus 339 ~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~l----------G~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~A 408 (433)
T 3qww_A 339 MLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHY----------PVYSLNVASMWLKLGRLYMGLENKAAGEKALKKA 408 (433)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHS----------CSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHc----------CCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 455567889999999999999999999999754420 1124677889999999999999999999999999
Q ss_pred HHc
Q 021445 291 MRD 293 (312)
Q Consensus 291 l~l 293 (312)
|++
T Consensus 409 l~i 411 (433)
T 3qww_A 409 IAI 411 (433)
T ss_dssp HHH
T ss_pred HHH
Confidence 954
No 209
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=97.66 E-value=9.8e-05 Score=65.19 Aligned_cols=66 Identities=9% Similarity=-0.041 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHcCCCchH-HHHHHHH
Q 021445 228 YKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVK-ALFRQGQ 306 (312)
Q Consensus 228 y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l~p~~~K-a~~rrg~ 306 (312)
+++|+..|++|++.+ .|....+|.+++..+.++|++++|+..++++|+++|.+.. +|...|.
T Consensus 80 ~~~A~~~~~rAl~~~-----------------~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~ 142 (308)
T 2ond_A 80 SDEAANIYERAISTL-----------------LKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMK 142 (308)
T ss_dssp HHHHHHHHHHHHTTT-----------------TTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHh-----------------CcccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHH
Confidence 499999999999832 2334568888888888888888888888888888888876 8888887
Q ss_pred Hhhh
Q 021445 307 VSII 310 (312)
Q Consensus 307 a~~~ 310 (312)
++..
T Consensus 143 ~~~~ 146 (308)
T 2ond_A 143 FARR 146 (308)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7643
No 210
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=97.63 E-value=0.00014 Score=63.55 Aligned_cols=71 Identities=15% Similarity=0.022 Sum_probs=58.1
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcC-CHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLG-DLKGALLDTEF 289 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~-~~~~Ai~~~~~ 289 (312)
.+..+.+.|..+++.|+|++|+..|.+||++..... .......+|.|+|.||.++| .+++|++++.+
T Consensus 195 ~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~------------~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~ 262 (293)
T 3u3w_A 195 DVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRIN------------SMALIGQLYYQRGECLRKLEYEEAEIEDAYKK 262 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT------------BCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcC------------cHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHH
Confidence 455678999999999999999999999999643210 11234779999999999999 57999999999
Q ss_pred HHHc
Q 021445 290 AMRD 293 (312)
Q Consensus 290 al~l 293 (312)
|+.+
T Consensus 263 Al~i 266 (293)
T 3u3w_A 263 ASFF 266 (293)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9965
No 211
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=97.63 E-value=0.00014 Score=58.96 Aligned_cols=90 Identities=16% Similarity=0.088 Sum_probs=68.4
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+...|..++..|+|++|+..|.+++.++...+ + .......++.|+|.++..+|++++|+..+.++
T Consensus 65 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~-----~------~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 133 (203)
T 3gw4_A 65 EHRALHQVGMVERMAGNWDAARRCFLEERELLASLP-----E------DPLAASANAYEVATVALHFGDLAGARQEYEKS 133 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC-----C------CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC-----c------cHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 455677889999999999999999999999754321 0 01245678999999999999999999999999
Q ss_pred HHcCCC------chHHHHHHHHHhhhh
Q 021445 291 MRDGDD------NVKALFRQGQVSIIL 311 (312)
Q Consensus 291 l~l~p~------~~Ka~~rrg~a~~~L 311 (312)
+.+.+. ...++...|.++..+
T Consensus 134 l~~~~~~~~~~~~~~~~~~la~~~~~~ 160 (203)
T 3gw4_A 134 LVYAQQADDQVAIACAFRGLGDLAQQE 160 (203)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhccchHHHHHHHHHHHHHHHHC
Confidence 965321 133456777776543
No 212
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=97.62 E-value=0.00012 Score=69.50 Aligned_cols=89 Identities=9% Similarity=-0.072 Sum_probs=68.2
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+.+.|..+..+|+|++|+..|+++|+..... ...-.|.....+.|+|..|..+|+|++|+..+.+|
T Consensus 350 ~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~----------lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~A 419 (490)
T 3n71_A 350 VLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKL----------YHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKA 419 (490)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH----------SCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH----------cCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 45567788999999999999999999999875432 11124677889999999999999999999999999
Q ss_pred HHc-----CCCch---HHHHHHHHHhh
Q 021445 291 MRD-----GDDNV---KALFRQGQVSI 309 (312)
Q Consensus 291 l~l-----~p~~~---Ka~~rrg~a~~ 309 (312)
|.+ -|+++ +.+-.+++++.
T Consensus 420 l~i~~~~lG~~Hp~~~~~~~~l~~~~~ 446 (490)
T 3n71_A 420 YAILLVTHGPSHPITKDLEAMRMQTEM 446 (490)
T ss_dssp HHHHHHHTCTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCChHHHHHHHHHHHHHH
Confidence 954 45553 34444445543
No 213
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.60 E-value=0.00021 Score=61.44 Aligned_cols=46 Identities=11% Similarity=-0.124 Sum_probs=42.0
Q ss_pred HHHHHhHHHHHHHH----cCCHHHHHHHHHHHHHcCCCchHHHHHHHHHhhh
Q 021445 263 KSQIFTNSSACKLK----LGDLKGALLDTEFAMRDGDDNVKALFRQGQVSII 310 (312)
Q Consensus 263 ~~~~~~N~a~~~~k----l~~~~~Ai~~~~~al~l~p~~~Ka~~rrg~a~~~ 310 (312)
...++.|+|.+|.+ ++++++|+..+.++++++ +..+++..|.+|..
T Consensus 109 ~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~ 158 (273)
T 1ouv_A 109 YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCTILGSLYDA 158 (273)
T ss_dssp CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHHHHHHHHHc
Confidence 46789999999999 999999999999999986 78899999999875
No 214
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=97.60 E-value=0.00041 Score=60.61 Aligned_cols=89 Identities=13% Similarity=-0.045 Sum_probs=68.7
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
....+.+++..++..++|++|+..|.++++... .. .........+.++|.++..+++|++|+..+.+|
T Consensus 74 ~~~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~-------~~-----~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 141 (293)
T 2qfc_A 74 RKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEE-------YH-----PEFQQFLQWQYYVAAYVLKKVDYEYCILELKKL 141 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCC-------CC-----HHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcccc-------CC-----hhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 455678899999999999999999999998421 11 122334556778999999999999999999999
Q ss_pred HHcCCCc------hHHHHHHHHHhhhh
Q 021445 291 MRDGDDN------VKALFRQGQVSIIL 311 (312)
Q Consensus 291 l~l~p~~------~Ka~~rrg~a~~~L 311 (312)
|.+.+.. +.+|+..|.+|..+
T Consensus 142 l~~~~~~~~~~~~~~~~~~lg~~y~~~ 168 (293)
T 2qfc_A 142 LNQQLTGIDVYQNLYIENAIANIYAEN 168 (293)
T ss_dssp HTTCCCSSCTTHHHHHHHHHHHHHHHT
T ss_pred HHHHhcCCchHHHHHHHHHHHHHHHHc
Confidence 9775543 56888888888654
No 215
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=97.59 E-value=0.00018 Score=60.04 Aligned_cols=78 Identities=12% Similarity=-0.123 Sum_probs=62.2
Q ss_pred hhHhhhhhHHh----hhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHH--HHHHHHhHHHHHHHH----cCCHHHH
Q 021445 214 SIKVFGNEHYK----KQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRK--TKSQIFTNSSACKLK----LGDLKGA 283 (312)
Q Consensus 214 ~~k~~Gn~~~~----~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~N~a~~~~k----l~~~~~A 283 (312)
.+...|..++. .+++++|+..|++|++ ..+ ....++.|++.+|.. .+++++|
T Consensus 87 a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~------------------~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A 148 (212)
T 3rjv_A 87 GEIVLARVLVNRQAGATDVAHAITLLQDAAR------------------DSESDAAVDAQMLLGLIYASGVHGPEDDVKA 148 (212)
T ss_dssp HHHHHHHHHTCGGGSSCCHHHHHHHHHHHTS------------------STTSHHHHHHHHHHHHHHHHTSSSSCCHHHH
T ss_pred HHHHHHHHHHcCCCCccCHHHHHHHHHHHHH------------------cCCCcchHHHHHHHHHHHHcCCCCCCCHHHH
Confidence 34556666665 6778888888888877 222 346789999999999 8899999
Q ss_pred HHHHHHHHHcCCCchHHHHHHHHHhhh
Q 021445 284 LLDTEFAMRDGDDNVKALFRQGQVSII 310 (312)
Q Consensus 284 i~~~~~al~l~p~~~Ka~~rrg~a~~~ 310 (312)
+..+.+|+++ |.++.|++..|.+|..
T Consensus 149 ~~~~~~A~~~-~~~~~a~~~Lg~~y~~ 174 (212)
T 3rjv_A 149 SEYFKGSSSL-SRTGYAEYWAGMMFQQ 174 (212)
T ss_dssp HHHHHHHHHT-SCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHc-CCCHHHHHHHHHHHHc
Confidence 9999999998 6788899999998864
No 216
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.59 E-value=0.00013 Score=68.07 Aligned_cols=91 Identities=9% Similarity=0.074 Sum_probs=70.9
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+..+.+.|..+..+|+|++|+..|.++|......- ....|.....++|+|..|..+|+|++|+..+.+|
T Consensus 328 ~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~l----------g~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~A 397 (429)
T 3qwp_A 328 QLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFF----------PGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLA 397 (429)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHS----------CSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHc----------CCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 456677888999999999999999999999764421 1124677889999999999999999999999999
Q ss_pred HHc-----CCCch---HHHHHHHHHhhhh
Q 021445 291 MRD-----GDDNV---KALFRQGQVSIIL 311 (312)
Q Consensus 291 l~l-----~p~~~---Ka~~rrg~a~~~L 311 (312)
|++ -|+++ +++-.++.|+..|
T Consensus 398 l~i~~~~lG~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 398 FDIMRVTHGREHSLIEDLILLLEECDANI 426 (429)
T ss_dssp HHHHHHHTCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCChHHHHHHHHHHHHHHHH
Confidence 954 34443 4555666666544
No 217
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=97.58 E-value=0.00037 Score=63.13 Aligned_cols=68 Identities=9% Similarity=-0.011 Sum_probs=53.6
Q ss_pred hcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcC-CHHHHHHHHHHHHHcCCCchHHHHHH
Q 021445 226 QDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLG-DLKGALLDTEFAMRDGDDNVKALFRQ 304 (312)
Q Consensus 226 ~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~-~~~~Ai~~~~~al~l~p~~~Ka~~rr 304 (312)
+..++|+..+.++|. ++|....++++|+.+...++ .+++++..++++|..+|++..+|+.|
T Consensus 68 e~se~AL~lt~~~L~------------------~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR 129 (349)
T 3q7a_A 68 EKSERALELTEIIVR------------------MNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHR 129 (349)
T ss_dssp CCSHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHH
T ss_pred CCCHHHHHHHHHHHH------------------hCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 444678888888888 66777778888888888888 48888888888888888888888888
Q ss_pred HHHhhhh
Q 021445 305 GQVSIIL 311 (312)
Q Consensus 305 g~a~~~L 311 (312)
+.++..+
T Consensus 130 ~wlL~~l 136 (349)
T 3q7a_A 130 LLLLDRI 136 (349)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8777654
No 218
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=97.58 E-value=0.00013 Score=64.17 Aligned_cols=81 Identities=6% Similarity=-0.111 Sum_probs=64.2
Q ss_pred hhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHH-HHHHHHhHHHHHHHHcCCHHHHHHHHHHHHH
Q 021445 214 SIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRK-TKSQIFTNSSACKLKLGDLKGALLDTEFAMR 292 (312)
Q Consensus 214 ~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~ 292 (312)
.....|..+++.++|.+|+..|++++..- .+ ....++.+++.++.++|++++|+..+++++.
T Consensus 137 ~~~~~a~l~~~~~r~~dA~~~l~~a~~~~-----------------d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~ 199 (282)
T 4f3v_A 137 VAWMKAVVYGAAERWTDVIDQVKSAGKWP-----------------DKFLAGAAGVAHGVAAANLALFTEAERRLTEAND 199 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTGGGCS-----------------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhhccC-----------------CcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhc
Confidence 55778888999999999999888776521 12 2245889999999999999999999999986
Q ss_pred cC--CC-chHHHHHHHHHhhhh
Q 021445 293 DG--DD-NVKALFRQGQVSIIL 311 (312)
Q Consensus 293 l~--p~-~~Ka~~rrg~a~~~L 311 (312)
.. |. ...+++++|.|+..+
T Consensus 200 g~~~P~~~~da~~~~glaL~~l 221 (282)
T 4f3v_A 200 SPAGEACARAIAWYLAMARRSQ 221 (282)
T ss_dssp STTTTTTHHHHHHHHHHHHHHH
T ss_pred CCCCccccHHHHHHHHHHHHHc
Confidence 54 55 678999999998765
No 219
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.53 E-value=0.00018 Score=67.20 Aligned_cols=91 Identities=11% Similarity=0.066 Sum_probs=70.3
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.++.+......+.++|+|++|+..|+++|+..... . ..-.+.....+.|+|.+|..+|+|++|+..+.++
T Consensus 286 ~~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~-----l-----g~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~ 355 (429)
T 3qwp_A 286 EVQESLKKIEELKAHWKWEQVLAMCQAIISSNSER-----L-----PDINIYQLKVLDCAMDACINLGLLEEALFYGTRT 355 (429)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCC-----C-----CTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCc-----C-----CccchHHHHHHHHHHHHHHhhccHHHHHHHHHHH
Confidence 45556666777888999999999999999843221 1 1134667889999999999999999999999999
Q ss_pred HHc--------CCCchHHHHHHHHHhhhh
Q 021445 291 MRD--------GDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 291 l~l--------~p~~~Ka~~rrg~a~~~L 311 (312)
|.+ .|.-+..|++.|.+|..+
T Consensus 356 L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~ 384 (429)
T 3qwp_A 356 MEPYRIFFPGSHPVRGVQVMKVGKLQLHQ 384 (429)
T ss_dssp HHHHHHHSCSSCHHHHHHHHHHHHHHHHT
T ss_pred HHhHHHHcCCCChHHHHHHHHHHHHHHhc
Confidence 944 344557888888888653
No 220
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=97.50 E-value=0.00016 Score=65.48 Aligned_cols=82 Identities=6% Similarity=-0.138 Sum_probs=72.4
Q ss_pred hhhhHhhhhhHHhhh-cHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHc-C-CHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQ-DYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKL-G-DLKGALLDTE 288 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~-~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl-~-~~~~Ai~~~~ 288 (312)
...+..++..+...+ .+++|+..+.++|. .+|....++.+|..++.++ + +++++++.|+
T Consensus 88 ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~------------------~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~ 149 (349)
T 3q7a_A 88 YTVWQYRFSLLTSLNKSLEDELRLMNEFAV------------------QNLKSYQVWHHRLLLLDRISPQDPVSEIEYIH 149 (349)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHH------------------TTCCCHHHHHHHHHHHHHHCCSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHH------------------hCCCcHHHHHHHHHHHHHhcCCChHHHHHHHH
Confidence 344677888888888 59999999999998 6677889999999999999 8 9999999999
Q ss_pred HHHHcCCCchHHHHHHHHHhhhh
Q 021445 289 FAMRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 289 ~al~l~p~~~Ka~~rrg~a~~~L 311 (312)
++|+++|.|.-||+.|+.++..+
T Consensus 150 k~L~~dpkNy~AW~~R~wvl~~l 172 (349)
T 3q7a_A 150 GSLLPDPKNYHTWAYLHWLYSHF 172 (349)
T ss_dssp HHTSSCTTCHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCHHHHHHHHHHHHHh
Confidence 99999999999999999887654
No 221
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=97.50 E-value=0.00032 Score=63.09 Aligned_cols=81 Identities=10% Similarity=-0.034 Sum_probs=58.9
Q ss_pred hhhHhhhhhHHhhhc----------HHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCC--H
Q 021445 213 DSIKVFGNEHYKKQD----------YKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGD--L 280 (312)
Q Consensus 213 ~~~k~~Gn~~~~~~~----------y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~--~ 280 (312)
..+.-++..+...++ +++++..+.++|. .+|....++.+|+.+..++++ +
T Consensus 65 taWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~------------------~~PKny~aW~hR~wlL~~l~~~~~ 126 (331)
T 3dss_A 65 TLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLR------------------VNPKSYGTWHHRCWLLSRLPEPNW 126 (331)
T ss_dssp HHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHCSSCCH
T ss_pred HHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHH------------------hCCCCHHHHHHHHHHHhccCcccH
Confidence 334555555554444 7788888888887 566677788888888888874 7
Q ss_pred HHHHHHHHHHHHcCCCchHHHHHHHHHhhhh
Q 021445 281 KGALLDTEFAMRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 281 ~~Ai~~~~~al~l~p~~~Ka~~rrg~a~~~L 311 (312)
++++..|+++|++||.|.-||..|+.++..+
T Consensus 127 ~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l 157 (331)
T 3dss_A 127 ARELELCARFLEADERNFHCWDYRRFVAAQA 157 (331)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Confidence 8888888888888888888888887776543
No 222
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=97.49 E-value=0.00012 Score=64.65 Aligned_cols=71 Identities=8% Similarity=0.093 Sum_probs=41.2
Q ss_pred hhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHH-HHhHHHHHHHHcCCHHHHHHHHHHHHH
Q 021445 214 SIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQ-IFTNSSACKLKLGDLKGALLDTEFAMR 292 (312)
Q Consensus 214 ~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~N~a~~~~kl~~~~~Ai~~~~~al~ 292 (312)
.+...|..+.+.|++++|...|+++|+.- |.... +|.+++.++.++|++++|+..+++|++
T Consensus 101 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~------------------p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~ 162 (308)
T 2ond_A 101 LYFAYADYEESRMKYEKVHSIYNRLLAIE------------------DIDPTLVYIQYMKFARRAEGIKSGRMIFKKARE 162 (308)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTSS------------------SSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhcc------------------ccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 45667777777888888888888888721 11111 455555555555555555555555555
Q ss_pred cCCCchHHHH
Q 021445 293 DGDDNVKALF 302 (312)
Q Consensus 293 l~p~~~Ka~~ 302 (312)
++|.+..+|+
T Consensus 163 ~~p~~~~~~~ 172 (308)
T 2ond_A 163 DARTRHHVYV 172 (308)
T ss_dssp STTCCTHHHH
T ss_pred cCCCCHHHHH
Confidence 5554444444
No 223
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=97.47 E-value=0.00023 Score=51.09 Aligned_cols=45 Identities=18% Similarity=0.134 Sum_probs=42.1
Q ss_pred HhHHHHHHHHcCCHHHHHHHHHHHHHcCCCchH-HHHHHHHHhhhh
Q 021445 267 FTNSSACKLKLGDLKGALLDTEFAMRDGDDNVK-ALFRQGQVSIIL 311 (312)
Q Consensus 267 ~~N~a~~~~kl~~~~~Ai~~~~~al~l~p~~~K-a~~rrg~a~~~L 311 (312)
..++|.+++++++|++|+..++++++++|.+.. +|+.+|.+|..+
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~ 48 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKL 48 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHc
Confidence 358999999999999999999999999999999 999999999765
No 224
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=97.45 E-value=0.00021 Score=59.63 Aligned_cols=100 Identities=15% Similarity=0.016 Sum_probs=70.5
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhh--------ccccC--CCCchhhh-----HHHHHHHHHHhHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDI--------CWEKE--GIDEGKSS-----SLRKTKSQIFTNSSACKL 275 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~--------~~~~~--~~~~~~~~-----~~~~~~~~~~~N~a~~~~ 275 (312)
.+..+...|..++..+++++|+..|++|++.=.. .-... +.+.++.. ..++....++.|++.+|.
T Consensus 17 ~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~g~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~A~~~g~~~a~~~Lg~~y~ 96 (212)
T 3rjv_A 17 DRRAQYYLADTWVSSGDYQKAEYWAQKAAAQGDGDALALLAQLKIRNPQQADYPQARQLAEKAVEAGSKSGEIVLARVLV 96 (212)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCHHHHHHHHHHTTSSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 4566788899999999999999999999863110 00011 00222211 123445667888888888
Q ss_pred H----cCCHHHHHHHHHHHHHcCC--CchHHHHHHHHHhhh
Q 021445 276 K----LGDLKGALLDTEFAMRDGD--DNVKALFRQGQVSII 310 (312)
Q Consensus 276 k----l~~~~~Ai~~~~~al~l~p--~~~Ka~~rrg~a~~~ 310 (312)
. .+++++|+..+.+|++..+ .++.|++..|.+|..
T Consensus 97 ~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~ 137 (212)
T 3rjv_A 97 NRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYAS 137 (212)
T ss_dssp CGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHH
T ss_pred cCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHc
Confidence 8 8889999999999998887 458899998888875
No 225
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=97.44 E-value=0.00041 Score=62.39 Aligned_cols=82 Identities=7% Similarity=-0.077 Sum_probs=72.3
Q ss_pred hhhhHhhhhhHHhhh--cHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCC-HHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQ--DYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGD-LKGALLDTE 288 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~--~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~-~~~Ai~~~~ 288 (312)
...|..++..+.+.+ .|++++..+.++|+ .+|....++.+|+.+..+++. +++++++++
T Consensus 108 y~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~------------------~dprNy~AW~~R~~vl~~l~~~~~eel~~~~ 169 (331)
T 3dss_A 108 YGTWHHRCWLLSRLPEPNWARELELCARFLE------------------ADERNFHCWDYRRFVAAQAAVAPAEELAFTD 169 (331)
T ss_dssp HHHHHHHHHHHHHCSSCCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCcccHHHHHHHHHHHHH------------------hCCCCHHHHHHHHHHHHHhCcCHHHHHHHHH
Confidence 344566777777766 49999999999999 778889999999999999999 699999999
Q ss_pred HHHHcCCCchHHHHHHHHHhhhh
Q 021445 289 FAMRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 289 ~al~l~p~~~Ka~~rrg~a~~~L 311 (312)
++|+.+|.|.-||..|+.++..+
T Consensus 170 ~~I~~~p~N~SAW~~R~~ll~~l 192 (331)
T 3dss_A 170 SLITRNFSNYSSWHYRSCLLPQL 192 (331)
T ss_dssp HHHHHCSCCHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCHHHHHHHHHHHHHh
Confidence 99999999999999999988765
No 226
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=97.37 E-value=0.0011 Score=59.42 Aligned_cols=86 Identities=9% Similarity=-0.020 Sum_probs=62.5
Q ss_pred hHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHcC
Q 021445 215 IKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDG 294 (312)
Q Consensus 215 ~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l~ 294 (312)
+...|..++..|+|++|+..|.+++......... ..+....++.|+|.++..+|++++|+..+.+++.+.
T Consensus 96 ~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~----------~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 165 (373)
T 1hz4_A 96 LIQQSEILFAQGFLQTAWETQEKAFQLINEQHLE----------QLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVL 165 (373)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCT----------TSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccc----------cCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Confidence 4556777778888888888888888754321000 013456788999999999999999999999999887
Q ss_pred CC-----chHHHHHHHHHhhh
Q 021445 295 DD-----NVKALFRQGQVSII 310 (312)
Q Consensus 295 p~-----~~Ka~~rrg~a~~~ 310 (312)
+. ...+++..|.++..
T Consensus 166 ~~~~~~~~~~~~~~la~~~~~ 186 (373)
T 1hz4_A 166 SSYQPQQQLQCLAMLIQCSLA 186 (373)
T ss_dssp TTSCGGGGHHHHHHHHHHHHH
T ss_pred hccCcHHHHHHHHHHHHHHHH
Confidence 65 34567777776653
No 227
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.29 E-value=0.0014 Score=50.13 Aligned_cols=46 Identities=11% Similarity=0.024 Sum_probs=40.7
Q ss_pred HHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHHHHH
Q 021445 262 TKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQV 307 (312)
Q Consensus 262 ~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l~p~~~Ka~~rrg~a 307 (312)
....++..+|..++|+|+|.+|++.|+.+|+++|.|..|.--+..+
T Consensus 72 ~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i 117 (126)
T 1nzn_A 72 EQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLI 117 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 4567899999999999999999999999999999999887666544
No 228
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.26 E-value=0.0013 Score=50.56 Aligned_cols=45 Identities=13% Similarity=0.046 Sum_probs=40.1
Q ss_pred HHHHHhHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHHHHH
Q 021445 263 KSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQV 307 (312)
Q Consensus 263 ~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l~p~~~Ka~~rrg~a 307 (312)
...++.-+|.+++|+|+|.+|+++|+.+|+++|.|..|.--+..+
T Consensus 77 ~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~I 121 (134)
T 3o48_A 77 RRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMV 121 (134)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Confidence 566888999999999999999999999999999999887666544
No 229
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=97.13 E-value=0.0016 Score=58.39 Aligned_cols=87 Identities=13% Similarity=-0.045 Sum_probs=67.9
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+...|..++..|+|++|...|.+++....... .......++.|+|.++..+|+|++|+..+.+++
T Consensus 53 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~------------~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al 120 (373)
T 1hz4_A 53 IVATSVLGEVLHCKGELTRSLALMQQTEQMARQHD------------VWHYALWSLIQQSEILFAQGFLQTAWETQEKAF 120 (373)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT------------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcC------------cHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 44567788999999999999999999998643310 112345678999999999999999999999999
Q ss_pred HcC--------CCchHHHHHHHHHhhh
Q 021445 292 RDG--------DDNVKALFRQGQVSII 310 (312)
Q Consensus 292 ~l~--------p~~~Ka~~rrg~a~~~ 310 (312)
.+. |....++...|.++..
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~la~~~~~ 147 (373)
T 1hz4_A 121 QLINEQHLEQLPMHEFLVRIRAQLLWA 147 (373)
T ss_dssp HHHHHTTCTTSTHHHHHHHHHHHHHHH
T ss_pred HHHHHhccccCcHHHHHHHHHHHHHHH
Confidence 875 3456677778877754
No 230
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=97.13 E-value=0.001 Score=58.43 Aligned_cols=75 Identities=12% Similarity=-0.025 Sum_probs=61.7
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHH-HHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKT-KSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.......|..+-..|++++|+..|++++.-- ..|. ...++.++|.|+.++|+.++|...++++
T Consensus 171 ~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~----------------~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a 234 (282)
T 4f3v_A 171 GAAGVAHGVAAANLALFTEAERRLTEANDSP----------------AGEACARAIAWYLAMARRSQGNESAAVALLEWL 234 (282)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTST----------------TTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHhcCC----------------CCccccHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3456778999999999999999999998610 1022 4568899999999999999999999999
Q ss_pred HHcCCCchHHHHH
Q 021445 291 MRDGDDNVKALFR 303 (312)
Q Consensus 291 l~l~p~~~Ka~~r 303 (312)
+..+|. .+++--
T Consensus 235 ~a~~P~-~~~~~a 246 (282)
T 4f3v_A 235 QTTHPE-PKVAAA 246 (282)
T ss_dssp HHHSCC-HHHHHH
T ss_pred HhcCCc-HHHHHH
Confidence 999998 665543
No 231
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.08 E-value=0.0014 Score=59.95 Aligned_cols=90 Identities=9% Similarity=-0.090 Sum_probs=64.8
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
......++|..++++|+|++|++.|.++++........... ........+....++.+++.+|.++|+|++|++...++
T Consensus 3 ~p~~~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~ 81 (434)
T 4b4t_Q 3 LPGSKLEEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAG-ASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHS 81 (434)
T ss_dssp STTHHHHHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSS-SSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred ChHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHH-HHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 34456788999999999999999999999843221111000 00111234455678899999999999999999999999
Q ss_pred HHcCCCchHHH
Q 021445 291 MRDGDDNVKAL 301 (312)
Q Consensus 291 l~l~p~~~Ka~ 301 (312)
+.+.+...++.
T Consensus 82 ~~~~~~~~~~~ 92 (434)
T 4b4t_Q 82 TEYMMQFAKSK 92 (434)
T ss_dssp HHHHHTSCHHH
T ss_pred HHHHHHccchH
Confidence 98876665553
No 232
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.05 E-value=0.0024 Score=49.76 Aligned_cols=45 Identities=13% Similarity=0.046 Sum_probs=39.3
Q ss_pred HHHHHhHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHHHHH
Q 021445 263 KSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQV 307 (312)
Q Consensus 263 ~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l~p~~~Ka~~rrg~a 307 (312)
...++..+|..++|+++|.+|.++|+.+|+++|.|..|.--+..+
T Consensus 76 ~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~I 120 (144)
T 1y8m_A 76 RRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMV 120 (144)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 455888999999999999999999999999999998877665443
No 233
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.01 E-value=0.0023 Score=49.51 Aligned_cols=71 Identities=10% Similarity=-0.071 Sum_probs=58.5
Q ss_pred hhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHH----cCCHHHHHHHHHHHHHc
Q 021445 218 FGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLK----LGDLKGALLDTEFAMRD 293 (312)
Q Consensus 218 ~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~k----l~~~~~Ai~~~~~al~l 293 (312)
.|..+...+.+++|+..|++|.+. ....++.|++.+|.. .+++++|++.+.+|.+.
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~--------------------g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 90 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL--------------------NSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL 90 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT--------------------TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC--------------------CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC
Confidence 566666667788899999999882 235688899999999 88999999999999987
Q ss_pred CCCchHHHHHHHHHhhh
Q 021445 294 GDDNVKALFRQGQVSII 310 (312)
Q Consensus 294 ~p~~~Ka~~rrg~a~~~ 310 (312)
.++.|++..|.+|..
T Consensus 91 --g~~~a~~~Lg~~y~~ 105 (138)
T 1klx_A 91 --NDQDGCLILGYKQYA 105 (138)
T ss_dssp --TCHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHC
Confidence 688999999988864
No 234
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=96.97 E-value=0.0024 Score=51.11 Aligned_cols=95 Identities=13% Similarity=0.106 Sum_probs=61.4
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCC---------CCchhhhHHHHHHHHHHhHHHHHHHHcCCHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEG---------IDEGKSSSLRKTKSQIFTNSSACKLKLGDLK 281 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~---------~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~ 281 (312)
.++.+.-.|+.+|.+++|..|...|++||...+....... ..+.. ..+ .....+...+|.||+++++++
T Consensus 62 ~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s-~~~-~~e~Elkykia~C~~~l~~~~ 139 (167)
T 3ffl_A 62 KYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQS-QCL-PSEIEVKYKLAECYTVLKQDK 139 (167)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC---------------------CC-CCHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCccc-ccc-cchHHHHHHHHHHHHHHCCHH
Confidence 5677888999999999999999999999987665321110 00000 000 113356778999999999999
Q ss_pred HHHHHHHHHHHcCCCchHHHHHHHHHh
Q 021445 282 GALLDTEFAMRDGDDNVKALFRQGQVS 308 (312)
Q Consensus 282 ~Ai~~~~~al~l~p~~~Ka~~rrg~a~ 308 (312)
+||...+.+-. ....+|.-.-.|+-|
T Consensus 140 ~Ai~~Le~Ip~-k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 140 DAIAILDGIPS-RQRTPKINMLLANLY 165 (167)
T ss_dssp HHHHHHHTSCG-GGCCHHHHHHHHHHC
T ss_pred HHHHHHhcCCc-hhcCHHHHHHHHHHh
Confidence 99997654321 124555555555443
No 235
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=96.64 E-value=0.0057 Score=47.21 Aligned_cols=72 Identities=19% Similarity=0.075 Sum_probs=58.2
Q ss_pred hhhhHhhhhhHHh----hhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHH----cCCHHHH
Q 021445 212 VDSIKVFGNEHYK----KQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLK----LGDLKGA 283 (312)
Q Consensus 212 ~~~~k~~Gn~~~~----~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~k----l~~~~~A 283 (312)
+..+...|..++. .+++++|+..|++|.+. ....++.|++.+|.. .+++++|
T Consensus 57 ~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--------------------g~~~a~~~Lg~~y~~G~g~~~d~~~A 116 (138)
T 1klx_A 57 GNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--------------------NDQDGCLILGYKQYAGKGVVKNEKQA 116 (138)
T ss_dssp HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--------------------TCHHHHHHHHHHHHHTSSSCCCHHHH
T ss_pred HHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--------------------CCHHHHHHHHHHHHCCCCCCcCHHHH
Confidence 4456677777777 89999999999999982 235588999999999 9999999
Q ss_pred HHHHHHHHHcCCCchHHHHHHH
Q 021445 284 LLDTEFAMRDGDDNVKALFRQG 305 (312)
Q Consensus 284 i~~~~~al~l~p~~~Ka~~rrg 305 (312)
+..+.+|.+.. +..|.+..+
T Consensus 117 ~~~~~~Aa~~g--~~~A~~~l~ 136 (138)
T 1klx_A 117 VKTFEKACRLG--SEDACGILN 136 (138)
T ss_dssp HHHHHHHHHTT--CHHHHHHC-
T ss_pred HHHHHHHHHCC--CHHHHHHHh
Confidence 99999999984 566665543
No 236
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.45 E-value=0.0041 Score=56.74 Aligned_cols=71 Identities=18% Similarity=0.102 Sum_probs=58.9
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+......|+.++..|+|.+|+..+.+++..+.... -.+....++.+++.+|+.+++|.+|...+++++
T Consensus 135 ~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al 202 (434)
T 4b4t_Q 135 HSLSIKLATLHYQKKQYKDSLALINDLLREFKKLD------------DKPSLVDVHLLESKVYHKLRNLAKSKASLTAAR 202 (434)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSS------------CSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcc------------cchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 44567789999999999999999999998654310 124457799999999999999999999999999
Q ss_pred HcC
Q 021445 292 RDG 294 (312)
Q Consensus 292 ~l~ 294 (312)
.+.
T Consensus 203 ~~~ 205 (434)
T 4b4t_Q 203 TAA 205 (434)
T ss_dssp HHH
T ss_pred HHh
Confidence 764
No 237
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=96.41 E-value=0.0046 Score=58.63 Aligned_cols=81 Identities=11% Similarity=-0.043 Sum_probs=63.1
Q ss_pred hhhhHhhhhhHHh-------hhcHH-------HHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHc
Q 021445 212 VDSIKVFGNEHYK-------KQDYK-------MALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKL 277 (312)
Q Consensus 212 ~~~~k~~Gn~~~~-------~~~y~-------~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl 277 (312)
...+...|..+.+ .|+++ +|+..|.+|++.+ .|....++.+++..+.++
T Consensus 272 ~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~-----------------~p~~~~l~~~~~~~~~~~ 334 (530)
T 2ooe_A 272 PDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTL-----------------LKKNMLLYFAYADYEESR 334 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTT-----------------CSSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHh-----------------CcccHHHHHHHHHHHHhc
Confidence 3445667776665 68876 8999999999721 233466889999999999
Q ss_pred CCHHHHHHHHHHHHHcCCCch-HHHHHHHHHhh
Q 021445 278 GDLKGALLDTEFAMRDGDDNV-KALFRQGQVSI 309 (312)
Q Consensus 278 ~~~~~Ai~~~~~al~l~p~~~-Ka~~rrg~a~~ 309 (312)
|++++|...++++|+++|.++ .+|...|.++.
T Consensus 335 g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~ 367 (530)
T 2ooe_A 335 MKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFAR 367 (530)
T ss_dssp TCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCccccCchHHHHHHHHHHH
Confidence 999999999999999999885 68888777654
No 238
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=96.38 E-value=0.0044 Score=57.87 Aligned_cols=93 Identities=13% Similarity=0.055 Sum_probs=55.3
Q ss_pred hhHhhhhhHHhhh---cHHHHHHHHHHHHHHhhhcc-------------ccCCCCchhhh-----HHHHHHHHHHhHHHH
Q 021445 214 SIKVFGNEHYKKQ---DYKMALRKYRKALRYLDICW-------------EKEGIDEGKSS-----SLRKTKSQIFTNSSA 272 (312)
Q Consensus 214 ~~k~~Gn~~~~~~---~y~~A~~~Y~kal~~l~~~~-------------~~~~~~~~~~~-----~~~~~~~~~~~N~a~ 272 (312)
.+...|..+.+.| ++++|+..|++|++.=.... .....+.++.. .. +....++.|++.
T Consensus 178 a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa-~g~~~a~~~Lg~ 256 (452)
T 3e4b_A 178 CYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA-PGYPASWVSLAQ 256 (452)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG-GGSTHHHHHHHH
T ss_pred HHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc-CCCHHHHHHHHH
Confidence 4567777888888 99999999999987311000 00001111110 01 344556667777
Q ss_pred HH---HHcCCHHHHHHHHHHHHHcCCCchHHHHHHHHHhh
Q 021445 273 CK---LKLGDLKGALLDTEFAMRDGDDNVKALFRQGQVSI 309 (312)
Q Consensus 273 ~~---~kl~~~~~Ai~~~~~al~l~p~~~Ka~~rrg~a~~ 309 (312)
+| ...+++++|+..+.++++. .++.|++..|.+|.
T Consensus 257 ~~~~~~~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~ 294 (452)
T 3e4b_A 257 LLYDFPELGDVEQMMKYLDNGRAA--DQPRAELLLGKLYY 294 (452)
T ss_dssp HHHHSGGGCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH
T ss_pred HHHhCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHH
Confidence 63 3566777777777777654 36777777776665
No 239
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=96.36 E-value=0.0046 Score=58.60 Aligned_cols=35 Identities=11% Similarity=-0.093 Sum_probs=23.8
Q ss_pred HHcCCHHHHHHHHHHHHHcCCCchHHHHHHHHHhh
Q 021445 275 LKLGDLKGALLDTEFAMRDGDDNVKALFRQGQVSI 309 (312)
Q Consensus 275 ~kl~~~~~Ai~~~~~al~l~p~~~Ka~~rrg~a~~ 309 (312)
..+|++++|+..++++|+.+|+++.+|...+..+.
T Consensus 402 ~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~ 436 (530)
T 2ooe_A 402 YCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLS 436 (530)
T ss_dssp HHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 35677777777777777777777777766665544
No 240
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=96.35 E-value=0.012 Score=54.83 Aligned_cols=99 Identities=11% Similarity=0.031 Sum_probs=67.4
Q ss_pred hhhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHh------hhccccCCCCchhh----hHHHHHHHHHHhHHHHHHHHcC
Q 021445 209 MNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYL------DICWEKEGIDEGKS----SSLRKTKSQIFTNSSACKLKLG 278 (312)
Q Consensus 209 ~~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l------~~~~~~~~~~~~~~----~~~~~~~~~~~~N~a~~~~kl~ 278 (312)
...+..+...|+.+++.|+|++|++.|.+|...- ..|........... ....|. -+..++.+|.+.|
T Consensus 145 Y~~a~n~~~LA~~L~~Lg~yq~AVea~~KA~~~~~Wk~v~~aCv~~~ef~lA~~~~l~L~~~ad---~l~~lv~~Yek~G 221 (449)
T 1b89_A 145 YNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHAD---ELEELINYYQDRG 221 (449)
T ss_dssp HHHTTCHHHHHHHHHTTTCHHHHHHHHHHHTCHHHHHHHHHHHHHTTCHHHHHHTTTTTTTCHH---HHHHHHHHHHHTT
T ss_pred HHHhhhHHHHHHHHHHhccHHHHHHHHHHcCCchhHHHHHHHHHHcCcHHHHHHHHHHHHhCHh---hHHHHHHHHHHCC
Confidence 3455667788999999999999999999995320 00000000000000 000111 1224678899999
Q ss_pred CHHHHHHHHHHHHHcCCCchHHHHHHHHHhhh
Q 021445 279 DLKGALLDTEFAMRDGDDNVKALFRQGQVSII 310 (312)
Q Consensus 279 ~~~~Ai~~~~~al~l~p~~~Ka~~rrg~a~~~ 310 (312)
+|++|+..++++|.+++.+.-++...|.+|.+
T Consensus 222 ~~eEai~lLe~aL~le~ah~~~ftel~il~~k 253 (449)
T 1b89_A 222 YFEELITMLEAALGLERAHMGMFTELAILYSK 253 (449)
T ss_dssp CHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999988754
No 241
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=96.34 E-value=0.0047 Score=57.92 Aligned_cols=29 Identities=21% Similarity=0.283 Sum_probs=17.9
Q ss_pred hhhhHhhhhhHHhh---hcHHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKK---QDYKMALRKYRKALR 240 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~---~~y~~A~~~Y~kal~ 240 (312)
...+...|..++.. +++++|+..|++|++
T Consensus 328 ~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~ 359 (490)
T 2xm6_A 328 ATAQANLGAIYFRLGSEEEHKKAVEWFRKAAA 359 (490)
T ss_dssp HHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcccHHHHHHHHHHHHH
Confidence 34455566666553 367777777777766
No 242
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=96.28 E-value=0.0039 Score=58.10 Aligned_cols=65 Identities=17% Similarity=0.266 Sum_probs=42.6
Q ss_pred hhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHc
Q 021445 214 SIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRD 293 (312)
Q Consensus 214 ~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l 293 (312)
.+...|+.++..|+|++|+..|+++ .-|.++|.|+.++|+|++|++.+.+|
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a--------------------------~n~~~LA~~L~~Lg~yq~AVea~~KA--- 174 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV--------------------------SNFGRLASTLVHLGEYQAAVDGARKA--- 174 (449)
T ss_dssp -------------CTTTHHHHHHHT--------------------------TCHHHHHHHHHTTTCHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh--------------------------hhHHHHHHHHHHhccHHHHHHHHHHc---
Confidence 7899999999999999999999976 15788999999999999999999999
Q ss_pred CCCchHHHHHHHHHhh
Q 021445 294 GDDNVKALFRQGQVSI 309 (312)
Q Consensus 294 ~p~~~Ka~~rrg~a~~ 309 (312)
.++++|.....|+.
T Consensus 175 --~~~~~Wk~v~~aCv 188 (449)
T 1b89_A 175 --NSTRTWKEVCFACV 188 (449)
T ss_dssp --TCHHHHHHHHHHHH
T ss_pred --CCchhHHHHHHHHH
Confidence 36666655544443
No 243
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=96.13 E-value=0.018 Score=53.90 Aligned_cols=29 Identities=17% Similarity=0.331 Sum_probs=22.2
Q ss_pred hhhhHhhhhhHHh----hhcHHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYK----KQDYKMALRKYRKALR 240 (312)
Q Consensus 212 ~~~~k~~Gn~~~~----~~~y~~A~~~Y~kal~ 240 (312)
+..+...|..++. .+++++|+..|++|++
T Consensus 39 ~~a~~~lg~~y~~g~~~~~~~~~A~~~~~~a~~ 71 (490)
T 2xm6_A 39 AKAQLELGYRYFQGNETTKDLTQAMDWFRRAAE 71 (490)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHH
Confidence 4456667777777 7888888888888876
No 244
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=96.13 E-value=0.011 Score=54.99 Aligned_cols=72 Identities=17% Similarity=0.030 Sum_probs=48.0
Q ss_pred hhHhhhhh-H--HhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcC-----CHHHHHH
Q 021445 214 SIKVFGNE-H--YKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLG-----DLKGALL 285 (312)
Q Consensus 214 ~~k~~Gn~-~--~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~-----~~~~Ai~ 285 (312)
.+...|.. + ...+++++|+..|++|++. ....++.|+|.+|. .| ++++|+.
T Consensus 250 a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~--------------------g~~~A~~~Lg~~y~-~G~g~~~d~~~A~~ 308 (452)
T 3e4b_A 250 SWVSLAQLLYDFPELGDVEQMMKYLDNGRAA--------------------DQPRAELLLGKLYY-EGKWVPADAKAAEA 308 (452)
T ss_dssp HHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT--------------------TCHHHHHHHHHHHH-HCSSSCCCHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC--------------------CCHHHHHHHHHHHH-cCCCCCCCHHHHHH
Confidence 34455555 2 3577888888888888762 13446667777776 33 7777777
Q ss_pred HHHHHHHcCCCchHHHHHHHHHhh
Q 021445 286 DTEFAMRDGDDNVKALFRQGQVSI 309 (312)
Q Consensus 286 ~~~~al~l~p~~~Ka~~rrg~a~~ 309 (312)
.+.+|. +.++.|++..|.+|.
T Consensus 309 ~~~~Aa---~g~~~A~~~Lg~~y~ 329 (452)
T 3e4b_A 309 HFEKAV---GREVAADYYLGQIYR 329 (452)
T ss_dssp HHHTTT---TTCHHHHHHHHHHHH
T ss_pred HHHHHh---CCCHHHHHHHHHHHH
Confidence 777777 667777777776664
No 245
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=96.05 E-value=0.051 Score=49.72 Aligned_cols=100 Identities=13% Similarity=0.005 Sum_probs=79.3
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCC----CCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEG----IDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLD 286 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~ 286 (312)
..+.+..+|......++.+.|+..+.+|+.+......... .-..+...+......+...++.+++.+|++.+|+..
T Consensus 114 ~f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~ 193 (388)
T 2ff4_A 114 RFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAE 193 (388)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence 3455667777777889999999999999998755332211 112334567788888999999999999999999999
Q ss_pred HHHHHHcCCCchHHHHHHHHHhhh
Q 021445 287 TEFAMRDGDDNVKALFRQGQVSII 310 (312)
Q Consensus 287 ~~~al~l~p~~~Ka~~rrg~a~~~ 310 (312)
+.+++..+|-+..+|...-.||+.
T Consensus 194 l~~~~~~~P~~E~~~~~lm~al~~ 217 (388)
T 2ff4_A 194 LEALTFEHPYREPLWTQLITAYYL 217 (388)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHT
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHH
Confidence 999999999999988888888764
No 246
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.82 E-value=0.014 Score=61.41 Aligned_cols=61 Identities=13% Similarity=0.106 Sum_probs=41.1
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
...|.+.|..+.+.|+|++|+..|.+|= ....|.+.+.|+.++|+|++|++.+..|+
T Consensus 1105 p~vWsqLAKAql~~G~~kEAIdsYiKAd-----------------------D~say~eVa~~~~~lGkyEEAIeyL~mAr 1161 (1630)
T 1xi4_A 1105 PAVWSQLAKAQLQKGMVKEAIDSYIKAD-----------------------DPSSYMEVVQAANTSGNWEELVKYLQMAR 1161 (1630)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHhcC-----------------------ChHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3445666777777777777777776651 24466677777777777777777777777
Q ss_pred HcCC
Q 021445 292 RDGD 295 (312)
Q Consensus 292 ~l~p 295 (312)
+.++
T Consensus 1162 k~~~ 1165 (1630)
T 1xi4_A 1162 KKAR 1165 (1630)
T ss_pred hhcc
Confidence 6653
No 247
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.66 E-value=0.014 Score=41.91 Aligned_cols=48 Identities=17% Similarity=-0.010 Sum_probs=42.3
Q ss_pred HHHHhHHHHHHHHcCC---HHHHHHHHHHHHHcCCCchHHHHHHHHHhhhh
Q 021445 264 SQIFTNSSACKLKLGD---LKGALLDTEFAMRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 264 ~~~~~N~a~~~~kl~~---~~~Ai~~~~~al~l~p~~~Ka~~rrg~a~~~L 311 (312)
..++..+|.+++..++ ..+|.....+||++||++++|++-.|.+++..
T Consensus 6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~ 56 (93)
T 3bee_A 6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFIS 56 (93)
T ss_dssp HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHc
Confidence 4578889999987666 79999999999999999999999999988753
No 248
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=95.66 E-value=0.0069 Score=47.89 Aligned_cols=69 Identities=12% Similarity=0.126 Sum_probs=55.9
Q ss_pred hhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcC---CHHHHHHHHHHHHHcC-C-CchH
Q 021445 225 KQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLG---DLKGALLDTEFAMRDG-D-DNVK 299 (312)
Q Consensus 225 ~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~---~~~~Ai~~~~~al~l~-p-~~~K 299 (312)
......+.+.|.+++. ..+....+..|.|.|+.+.+ +.++++..++.+++.+ | .+..
T Consensus 11 ~~~l~~~~~~y~~e~~------------------~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd 72 (152)
T 1pc2_A 11 VEDLLKFEKKFQSEKA------------------AGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRD 72 (152)
T ss_dssp HHHHHHHHHHHHHHHH------------------TTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHc------------------cCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHH
Confidence 3456677777887776 12234568889999999998 6779999999999999 7 6799
Q ss_pred HHHHHHHHhhhh
Q 021445 300 ALFRQGQVSIIL 311 (312)
Q Consensus 300 a~~rrg~a~~~L 311 (312)
++|..|.+|+.+
T Consensus 73 ~lY~LAv~~~kl 84 (152)
T 1pc2_A 73 YVFYLAVGNYRL 84 (152)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHc
Confidence 999999999876
No 249
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=95.65 E-value=0.036 Score=44.21 Aligned_cols=89 Identities=8% Similarity=-0.000 Sum_probs=68.4
Q ss_pred hhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHc
Q 021445 214 SIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRD 293 (312)
Q Consensus 214 ~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l 293 (312)
.+.+....++..+.|+.|+-.+..++.+.+..+ +.. -......++..+|.+++..++|..|+..+.+||++
T Consensus 22 ~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~--~~~-------sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~ 92 (167)
T 3ffl_A 22 NVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNP--ELF-------SPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQ 92 (167)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHST--TSS-------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCc--ccc-------cHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHH
Confidence 478899999999999999999999998653310 000 12345678899999999999999999999999844
Q ss_pred CC---C----------------------chHHHHHHHHHhhhh
Q 021445 294 GD---D----------------------NVKALFRQGQVSIIL 311 (312)
Q Consensus 294 ~p---~----------------------~~Ka~~rrg~a~~~L 311 (312)
.. . .+...|+-|.||.+|
T Consensus 93 ~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l 135 (167)
T 3ffl_A 93 KKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVL 135 (167)
T ss_dssp HHCC--------------------CCCCHHHHHHHHHHHHHHT
T ss_pred HHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHH
Confidence 21 1 125778999999876
No 250
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=95.62 E-value=0.021 Score=51.76 Aligned_cols=62 Identities=8% Similarity=-0.137 Sum_probs=52.3
Q ss_pred hhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHcCCCc
Q 021445 218 FGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDN 297 (312)
Q Consensus 218 ~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l~p~~ 297 (312)
.+..++.+|++++|+..+++|+. +++. ...|.-+|.++.-.|++++|++.+.+|+.++|..
T Consensus 283 lal~~l~~gd~d~A~~~l~rAl~------------------Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~ 343 (372)
T 3ly7_A 283 KAVSALVKGKTDESYQAINTGID------------------LEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGA 343 (372)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHH------------------HCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHh------------------cCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence 44556678999999999999999 3332 4567788999999999999999999999999977
Q ss_pred h
Q 021445 298 V 298 (312)
Q Consensus 298 ~ 298 (312)
.
T Consensus 344 ~ 344 (372)
T 3ly7_A 344 N 344 (372)
T ss_dssp H
T ss_pred C
Confidence 5
No 251
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.52 E-value=0.031 Score=58.93 Aligned_cols=45 Identities=7% Similarity=-0.097 Sum_probs=39.1
Q ss_pred HHhHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHHHHHhhh
Q 021445 266 IFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQVSII 310 (312)
Q Consensus 266 ~~~N~a~~~~kl~~~~~Ai~~~~~al~l~p~~~Ka~~rrg~a~~~ 310 (312)
.+..++..|.++|.|++||..|+++|.+++.+.-.+...|.+|.+
T Consensus 1282 eLeeli~yYe~~G~feEAI~LlE~aL~LeraH~gmftELaiLyaK 1326 (1630)
T 1xi4_A 1282 ELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSK 1326 (1630)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHhccChhHhHHHHHHHHHHHh
Confidence 455788899999999999999999999999998888788877653
No 252
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=95.43 E-value=0.03 Score=49.63 Aligned_cols=77 Identities=6% Similarity=0.032 Sum_probs=59.8
Q ss_pred hHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHcC
Q 021445 215 IKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDG 294 (312)
Q Consensus 215 ~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l~ 294 (312)
+.-.|..++..|++++|++.+.++|..- + + +....++.-++.+++++|+.+.|.+.+.+..+.+
T Consensus 103 ~~~la~i~~~~g~~eeAL~~l~~~i~~~-------~-~--------~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~ 166 (310)
T 3mv2_B 103 LYLLATAQAILGDLDKSLETCVEGIDND-------E-A--------EGTTELLLLAIEVALLNNNVSTASTIFDNYTNAI 166 (310)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHTSS-------C-S--------TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhccC-------C-C--------cCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC
Confidence 4577888999999999999999998720 0 0 1355678889999999999999999999999999
Q ss_pred CC----chHHHHHHHHH
Q 021445 295 DD----NVKALFRQGQV 307 (312)
Q Consensus 295 p~----~~Ka~~rrg~a 307 (312)
|+ +-..+...+.+
T Consensus 167 ~d~~~~~d~~l~~Laea 183 (310)
T 3mv2_B 167 EDTVSGDNEMILNLAES 183 (310)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred ccccccchHHHHHHHHH
Confidence 83 23344555544
No 253
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=95.17 E-value=0.027 Score=49.97 Aligned_cols=65 Identities=12% Similarity=0.009 Sum_probs=49.0
Q ss_pred cHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHc----------CCC
Q 021445 227 DYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRD----------GDD 296 (312)
Q Consensus 227 ~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l----------~p~ 296 (312)
++++|...|+++.+.... .....+++| |++++|+|++|....+.++++ +|+
T Consensus 193 ~~q~A~~~f~El~~~~p~----------------~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~ 253 (310)
T 3mv2_B 193 TATSNFYYYEELSQTFPT----------------WKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLY 253 (310)
T ss_dssp TTTHHHHHHHHHHTTSCS----------------HHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSS
T ss_pred cHHHHHHHHHHHHHhCCC----------------cccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCC
Confidence 888888888887662100 012345666 999999999999999988877 588
Q ss_pred chHHHHHHHHHhhh
Q 021445 297 NVKALFRQGQVSII 310 (312)
Q Consensus 297 ~~Ka~~rrg~a~~~ 310 (312)
++.++...+.+.+.
T Consensus 254 ~~~~LaN~i~l~~~ 267 (310)
T 3mv2_B 254 KPTFLANQITLALM 267 (310)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 99999888766554
No 254
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=94.89 E-value=0.094 Score=36.80 Aligned_cols=65 Identities=11% Similarity=0.082 Sum_probs=44.5
Q ss_pred hhhhhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHH
Q 021445 207 WWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSAC 273 (312)
Q Consensus 207 ~~~~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~ 273 (312)
..++.|..+..+|..+=+.|+|++|+.+|.+||++|......+ +++.. ...-.....=|.+||.-
T Consensus 14 ~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~alk~e-~d~~~-k~~ir~K~~eY~~RAE~ 78 (83)
T 2w2u_A 14 MLEEMARKYAINAVKADKEGNAEEAITNYKKAIEVLAQLVSLY-RDGST-AAIYEQMINEYKRRIEV 78 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHS-TTSST-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHC-CCHHH-HHHHHHHHHHHHHHHHH
Confidence 3566788889999999999999999999999999886643222 22222 22223344456666654
No 255
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=94.69 E-value=0.099 Score=45.78 Aligned_cols=69 Identities=12% Similarity=0.058 Sum_probs=57.1
Q ss_pred hhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHH--HHHHHhHHHHHHHHc-----CCHHHHHHHHHHHHHcCCC
Q 021445 224 KKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKT--KSQIFTNSSACKLKL-----GDLKGALLDTEFAMRDGDD 296 (312)
Q Consensus 224 ~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~N~a~~~~kl-----~~~~~Ai~~~~~al~l~p~ 296 (312)
..+....|....++||+ ++|. .-.+|.-++..|.++ |+.++|.+++++||+++|+
T Consensus 175 Al~~l~~A~a~lerAle------------------LDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~ 236 (301)
T 3u64_A 175 LPDTVHAAVMMLERACD------------------LWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSA 236 (301)
T ss_dssp CHHHHHHHHHHHHHHHH------------------HCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCT
T ss_pred HHHhHHHHHHHHHHHHH------------------hCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCC
Confidence 33456778888888888 5665 455999999999996 9999999999999999997
Q ss_pred c-hHHHHHHHHHhhh
Q 021445 297 N-VKALFRQGQVSII 310 (312)
Q Consensus 297 ~-~Ka~~rrg~a~~~ 310 (312)
. ..+++..|..+..
T Consensus 237 ~~id~~v~YA~~l~~ 251 (301)
T 3u64_A 237 HDPDHHITYADALCI 251 (301)
T ss_dssp TCSHHHHHHHHHTTT
T ss_pred CCchHHHHHHHHHHH
Confidence 5 9999888887654
No 256
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=94.61 E-value=0.11 Score=36.35 Aligned_cols=65 Identities=9% Similarity=0.039 Sum_probs=44.1
Q ss_pred hhhhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHH
Q 021445 208 WMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACK 274 (312)
Q Consensus 208 ~~~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~ 274 (312)
.++.|..+..+|...=+.|+|++|+.+|.+||++|....... +++.... .-.....=|.+||.-.
T Consensus 7 ~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~~lk~e-~d~~~k~-~ir~K~~eY~~RAE~L 71 (83)
T 2v6y_A 7 LEDMARKYAILAVKADKEGKVEDAITYYKKAIEVLSQIIVLY-PESVART-AYEQMINEYKKRISYL 71 (83)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHC-TTCTTHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHC-CCHHHHH-HHHHHHHHHHHHHHHH
Confidence 456788888999999999999999999999999886643222 2222212 2233444566666543
No 257
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=94.36 E-value=0.16 Score=38.08 Aligned_cols=68 Identities=13% Similarity=0.122 Sum_probs=44.9
Q ss_pred hhhhhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHH
Q 021445 207 WWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKL 275 (312)
Q Consensus 207 ~~~~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~ 275 (312)
..++.|..+..+|...=+.++|++|+.+|..|+++|.........++.... .-...+.-|++||.-.-
T Consensus 13 ~~l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~~alk~e~~~~~~k~-~lr~K~~eYl~RAE~LK 80 (117)
T 2cpt_A 13 PNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQ-SIRAKCTEYLDRAEKLK 80 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTSCCCHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhccCCHHHHH-HHHHHHHHHHHHHHHHH
Confidence 356678888889999999999999999999999987654332223332222 22233445566655443
No 258
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=94.30 E-value=0.17 Score=45.82 Aligned_cols=96 Identities=9% Similarity=-0.027 Sum_probs=60.7
Q ss_pred hhhHhhhhhHHh---hhcHHHHHHHHHHHHHHhhhc--------------cccCCCCchhhh------------HHHHHH
Q 021445 213 DSIKVFGNEHYK---KQDYKMALRKYRKALRYLDIC--------------WEKEGIDEGKSS------------SLRKTK 263 (312)
Q Consensus 213 ~~~k~~Gn~~~~---~~~y~~A~~~Y~kal~~l~~~--------------~~~~~~~~~~~~------------~~~~~~ 263 (312)
-.+.-+|..++. ...+.+|+.+|++||+.=... ............ ...+..
T Consensus 197 ydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~~ 276 (372)
T 3ly7_A 197 LTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNNL 276 (372)
T ss_dssp HHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTTC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCcC
Confidence 334556666654 456789999999999731110 000111111111 112333
Q ss_pred HHHHhHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHHHHHhh
Q 021445 264 SQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQVSI 309 (312)
Q Consensus 264 ~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l~p~~~Ka~~rrg~a~~ 309 (312)
..+|.-++..++..|++++|+..+++||.++|+ .-+|..+|+++.
T Consensus 277 a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~ 321 (372)
T 3ly7_A 277 SIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYE 321 (372)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHH
Confidence 445555777788889999999999999999974 678888888775
No 259
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=94.23 E-value=0.27 Score=39.31 Aligned_cols=118 Identities=15% Similarity=0.189 Sum_probs=65.6
Q ss_pred EEEEEEECCeeee-EEEEEEeCCCCchhHHhHHHHhhCCCCCCCCCCCCceecCCEEEEeecC--CeEEeCCCCCCCCCC
Q 021445 6 CFLDISIGVELEG-RIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKGVRFHRVIKG--FMIQGGDISAGDGTG 82 (312)
Q Consensus 6 v~~d~~~~~~~~G-~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~~Y~g~~~~rv~~~--~~iq~G~~~~~~~~~ 82 (312)
.|+.|++... | .++.+|..+.||+||+.|.++-= |.+..+|-..-+ .++--|++..
T Consensus 22 r~i~itl~~~--g~~~~A~Lldd~APkTcaA~~~~LP--------------~~~~viHarwSGeeVy~~lp~f~~----- 80 (188)
T 3kop_A 22 RYINITLEKR--GVTCKALLLDDVAPRTSKAVWDALP--------------QSSQVFHGKYARNEIYNLVPAFAP----- 80 (188)
T ss_dssp CEEEEEETTT--TEEEEEEECTTTSHHHHHHHHHHCC--------------EEEECEECSSSSSEEEEEEECCSS-----
T ss_pred eEEEEEEecC--CeEEEEEEccccChHHHHHHHHhCC--------------CCcceEEEEEecceEEEECCcccc-----
Confidence 4677777532 4 48899999999999999999632 333334333333 2333333210
Q ss_pred CCcccCCCCCCCcccccCCCcceEEeecC----------C--C------CCCCceEEEecCCCCC-CCCC-----CceEE
Q 021445 83 GESIYGLKFEDENFELKHERKGMLSMANA----------G--P------NTNGSQFFITTTRTSH-LDGK-----HVVFG 138 (312)
Q Consensus 83 ~~~~~~~~~~~e~~~~~~~~~G~l~~~~~----------~--~------~~~~sqF~I~~~~~~~-ld~~-----~~vfG 138 (312)
.....|| ...+..+|-|++-.. | + .+....+.|-.+.+.. ++++ -.+|+
T Consensus 81 ------~~~g~EN-~T~~P~pGDIl~f~f~p~~lG~~~yGy~~~~~~~~~~~~~dl~ifYG~~~~l~~~~~GwlpGN~F~ 153 (188)
T 3kop_A 81 ------KEPGAEN-TTVTPIPGDVCYFTFTSNDLKTPSHGYEADSGTDEVQTIVDLAVFYGRNNLLLNGDTGWVPGNVFA 153 (188)
T ss_dssp ------SCCCSCS-EESSCCTTEEEEEEEEHHHHSSGGGCC--------CCEEEEEEEECSSSCCCEETTTEECCEEEEE
T ss_pred ------cCCCcCC-CCCCCCCCcEEEEecCCcccCCccccccccccccCCCcceEEEEEecccccccccccceecCcEEE
Confidence 0123344 233445677776311 1 0 1112456666665432 2322 36899
Q ss_pred EEEeChHHHHHHh
Q 021445 139 RVIKGMGVVRSIE 151 (312)
Q Consensus 139 ~V~~G~~vl~~i~ 151 (312)
+|++|+|-+.++-
T Consensus 154 TIveGle~la~~c 166 (188)
T 3kop_A 154 TIVEGLDEMAAAC 166 (188)
T ss_dssp EEEESHHHHHHHH
T ss_pred EEecCHHHHHHHH
Confidence 9999998876553
No 260
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=94.14 E-value=0.28 Score=48.73 Aligned_cols=50 Identities=16% Similarity=0.109 Sum_probs=43.1
Q ss_pred HHHHHhHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHHHHHhhhhC
Q 021445 263 KSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQVSIILL 312 (312)
Q Consensus 263 ~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l~p~~~Ka~~rrg~a~~~L~ 312 (312)
...++.--|.-++..++|+-|++.+.+|..+-|...++|++.|++|..|+
T Consensus 336 ~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~ 385 (754)
T 4gns_B 336 MSDLLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKE 385 (754)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTT
T ss_pred chHHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhc
Confidence 34455556777778899999999999999999999999999999999874
No 261
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=93.33 E-value=0.32 Score=34.84 Aligned_cols=66 Identities=15% Similarity=0.079 Sum_probs=44.0
Q ss_pred hhhhhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHH
Q 021445 207 WWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACK 274 (312)
Q Consensus 207 ~~~~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~ 274 (312)
..++.|..+..+|..+=+.++|++|+.+|..|+++|..... ...++.... .-...+.-|++||.-.
T Consensus 10 ~~l~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~alk-~e~~~~~k~-~l~~K~~eYl~RAE~L 75 (93)
T 1wfd_A 10 SDSTAAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQVLK-GTKESSKRC-VLRTKISGYMDRAENI 75 (93)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH-TCCCHHHHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH-HCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence 34567888889999999999999999999999998765422 222322222 2233344566665543
No 262
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=92.86 E-value=0.29 Score=34.49 Aligned_cols=35 Identities=20% Similarity=0.170 Sum_probs=30.2
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhc
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDIC 245 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~ 245 (312)
.+..+..+|..+=+.|+|++|+.+|..||++|...
T Consensus 15 ~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll~a 49 (86)
T 4a5x_A 15 AAATVLKRAVELDSESRYPQALVCYQEGIDLLLQV 49 (86)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 56667888888899999999999999999987654
No 263
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=92.76 E-value=0.13 Score=51.18 Aligned_cols=59 Identities=19% Similarity=0.259 Sum_probs=51.2
Q ss_pred hhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 214 SIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 214 ~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
-|..++.-+.++|+|+.|+.+-++|+. ..|..-..|..+|.||.+|++|+.|+-..+.+
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~------------------~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTE------------------LALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHh------------------cCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 456677888899999999999999999 45666779999999999999999999877766
No 264
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=92.55 E-value=0.34 Score=33.95 Aligned_cols=38 Identities=16% Similarity=0.213 Sum_probs=32.7
Q ss_pred hhhhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhc
Q 021445 208 WMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDIC 245 (312)
Q Consensus 208 ~~~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~ 245 (312)
.++.|..+..+|...=+.|+|++|+..|..|+++|...
T Consensus 9 ~l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~~a 46 (85)
T 2v6x_A 9 FLTKGIELVQKAIDLDTATQYEEAYTAYYNGLDYLMLA 46 (85)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 45677788889999999999999999999999987553
No 265
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structu proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus}
Probab=92.42 E-value=0.65 Score=36.48 Aligned_cols=105 Identities=20% Similarity=0.212 Sum_probs=61.1
Q ss_pred EEEEECCeeeeEEEEEEeCCCCchhHHhHHHHhhCCCCCCCCCCCCceecCCEEEEeecCCeEEeCCCCCCCCCCCCccc
Q 021445 8 LDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKGVRFHRVIKGFMIQGGDISAGDGTGGESIY 87 (312)
Q Consensus 8 ~d~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~~Y~g~~~~rv~~~~~iq~G~~~~~~~~~~~~~~ 87 (312)
+.|.+++ ..++++|+.+.||.||+.|+++-=- ... +.+ ..+ -+.+ ++...
T Consensus 32 I~i~~~~---~~~~a~L~D~~aP~Ta~~f~~~LPl--------------~~~-~~~-~g~-E~y~-~lp~~--------- 81 (153)
T 2nnz_A 32 LRIRFES---AECEVELYEEWAPETVRAIADALPI--------------KST-ANR-WGD-EIYF-TTQVA--------- 81 (153)
T ss_dssp EEEEETT---EEEEECCCTTSCHHHHHHHHHTCSE--------------EEE-EEE-ETT-EEEE-CCSCC---------
T ss_pred EEEEECC---EEEEEEEcCCCCHHHHHHHHHhCCc--------------EEE-HHh-hCC-cEEE-ECCCC---------
Confidence 4455664 6799999999999999999997321 111 112 111 1111 11100
Q ss_pred CCCCCCCcccccCCCcceEEeecCCCCCCCceEEEecCCCCCCC------CCCceEEEEEeChHHHHHH
Q 021445 88 GLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLD------GKHVVFGRVIKGMGVVRSI 150 (312)
Q Consensus 88 ~~~~~~e~~~~~~~~~G~l~~~~~~~~~~~sqF~I~~~~~~~ld------~~~~vfG~V~~G~~vl~~i 150 (312)
.... |+ ......+|-|++-..+. .+.|-.++.|... ..-.+||+|.+|++.|..+
T Consensus 82 -l~~~-en-~~~~~~~GDI~Yy~pg~-----~LaIFYg~~p~s~~e~~~as~~~~lG~I~~gle~L~~~ 142 (153)
T 2nnz_A 82 -VEKE-EN-SKDVVELGDVAYWIPGK-----AICLFFGKTPISDDKIRPASAVNVIGRIVNSMEGLKGV 142 (153)
T ss_dssp -CCCS-SC-CBCCCCTTEEEEETTTT-----EEEEESSCCTTCTTSCCCCSSEEEEEECCSCCCCGGGC
T ss_pred -CCCC-CC-CcccCCCCeEEEeCCCC-----EEEEEECCccccccccccccccEEEEEEccCHHHHhhC
Confidence 0111 22 22334679998877653 3777777764322 2247899999998777655
No 266
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=92.09 E-value=0.42 Score=34.39 Aligned_cols=46 Identities=17% Similarity=-0.077 Sum_probs=39.6
Q ss_pred HHhHHHHHHHHcCCHHHHHHHHHHHHHcC-------CCchHHHHHHHHHhhhh
Q 021445 266 IFTNSSACKLKLGDLKGALLDTEFAMRDG-------DDNVKALFRQGQVSIIL 311 (312)
Q Consensus 266 ~~~N~a~~~~kl~~~~~Ai~~~~~al~l~-------p~~~Ka~~rrg~a~~~L 311 (312)
-++.+|..++++++|..|+..+.+|++.. +..+..+...|.|+..+
T Consensus 7 dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~ 59 (104)
T 2v5f_A 7 DCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQ 59 (104)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999763 45678899999998865
No 267
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=91.44 E-value=0.17 Score=44.31 Aligned_cols=64 Identities=9% Similarity=-0.019 Sum_probs=52.7
Q ss_pred hHhhhhhHHhh-----hcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHH-HHHHhHHHHHHHH-cCCHHHHHHHH
Q 021445 215 IKVFGNEHYKK-----QDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTK-SQIFTNSSACKLK-LGDLKGALLDT 287 (312)
Q Consensus 215 ~k~~Gn~~~~~-----~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~N~a~~~~k-l~~~~~Ai~~~ 287 (312)
+.-.|.-+.+. |+.++|.++|++||+ ++|.. +..+.-.|..+.. ++++++|.+.+
T Consensus 202 ~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~------------------LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L 263 (301)
T 3u64_A 202 WNVLTKFYAAAPESFGGGMEKAHTAFEHLTR------------------YCSAHDPDHHITYADALCIPLNNRAGFDEAL 263 (301)
T ss_dssp HHHHHHHHHHSCTTTTCCHHHHHHHHHHHHH------------------HCCTTCSHHHHHHHHHTTTTTTCHHHHHHHH
T ss_pred HHHHHHHHHhCCCccCCCHHHHHHHHHHHHH------------------hCCCCCchHHHHHHHHHHHhcCCHHHHHHHH
Confidence 34455555563 899999999999999 66654 7788888998888 59999999999
Q ss_pred HHHHHcCCC
Q 021445 288 EFAMRDGDD 296 (312)
Q Consensus 288 ~~al~l~p~ 296 (312)
++||..+|.
T Consensus 264 ~kAL~a~p~ 272 (301)
T 3u64_A 264 DRALAIDPE 272 (301)
T ss_dssp HHHHHCCGG
T ss_pred HHHHcCCCC
Confidence 999998876
No 268
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=91.20 E-value=1.3 Score=39.06 Aligned_cols=85 Identities=12% Similarity=0.119 Sum_probs=53.4
Q ss_pred hhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccc----------------------------cCCCCchhh---h-----
Q 021445 214 SIKVFGNEHYKKQDYKMALRKYRKALRYLDICWE----------------------------KEGIDEGKS---S----- 257 (312)
Q Consensus 214 ~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~----------------------------~~~~~~~~~---~----- 257 (312)
...+.|-.+++.|+|++|+..|+.+|..+-...- ......++. .
T Consensus 116 ~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYilal~iEl~Rr~l~~~~~kR~lELAAY 195 (325)
T 3mv2_A 116 EKMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYILGLSIELERRSLKEGNTVRMLELAAY 195 (325)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHH
Confidence 3456899999999999999999998865422110 011111110 0
Q ss_pred ----HHHHHHHH-HHhHHHHHHHHcCCHHHHHHHHHHHHHcCCCch
Q 021445 258 ----SLRKTKSQ-IFTNSSACKLKLGDLKGALLDTEFAMRDGDDNV 298 (312)
Q Consensus 258 ----~~~~~~~~-~~~N~a~~~~kl~~~~~Ai~~~~~al~l~p~~~ 298 (312)
.+.+.... ++..--...+|.++|.-|...+.+.|++.|.-.
T Consensus 196 FT~c~LQp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~ 241 (325)
T 3mv2_A 196 FTKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSGP 241 (325)
T ss_dssp GGGSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSH
T ss_pred hccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHH
Confidence 11222222 222233346789999999999999999998544
No 269
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.43 E-value=2.2 Score=31.58 Aligned_cols=79 Identities=11% Similarity=-0.029 Sum_probs=58.7
Q ss_pred hhhhhhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccc----cCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHH
Q 021445 206 SWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWE----KEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLK 281 (312)
Q Consensus 206 ~~~~~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~ 281 (312)
....+.|-.+.++|-.+=..|+-+.|++.|+++|..|..-.. ..+...+.+.....+....-.||..+.-+|+..+
T Consensus 16 k~~h~~AF~~Is~AL~~DE~g~k~~Al~lYk~GI~eLe~Gl~I~~~~~~~~g~~we~Ar~lq~KM~~nL~~v~~RL~~Le 95 (116)
T 2dl1_A 16 REAYKKAFLFVNKGLNTDELGQKEEAKNYYKQGIGHLLRGISISSKESEHTGPGWESARQMQQKMKETLQNVRTRLEILE 95 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSCCCCTTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHHhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556666677777777789999999999999998876432 1235667777788888889999999998887655
Q ss_pred HHH
Q 021445 282 GAL 284 (312)
Q Consensus 282 ~Ai 284 (312)
...
T Consensus 96 ~~~ 98 (116)
T 2dl1_A 96 KGL 98 (116)
T ss_dssp HHH
T ss_pred hcC
Confidence 443
No 270
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=86.57 E-value=3.2 Score=36.57 Aligned_cols=84 Identities=11% Similarity=0.118 Sum_probs=53.3
Q ss_pred hhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhcc---------------------------c-cCCCCc---hhh---h--
Q 021445 214 SIKVFGNEHYKKQDYKMALRKYRKALRYLDICW---------------------------E-KEGIDE---GKS---S-- 257 (312)
Q Consensus 214 ~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~---------------------------~-~~~~~~---~~~---~-- 257 (312)
...+.|-.+++.|++++|+..|+..|..+-... . ...... ++. .
T Consensus 104 ~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreYilal~iEl~Rr~l~~~~~~~~kR~lEL 183 (320)
T 3mkr_B 104 QRLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQKRICEM 183 (320)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHHHH
Confidence 356889999999999999999999887652110 0 111111 110 0
Q ss_pred -------HHHHHHHHH-HhHHHHHHHHcCCHHHHHHHHHHHHHcCCCc
Q 021445 258 -------SLRKTKSQI-FTNSSACKLKLGDLKGALLDTEFAMRDGDDN 297 (312)
Q Consensus 258 -------~~~~~~~~~-~~N~a~~~~kl~~~~~Ai~~~~~al~l~p~~ 297 (312)
.+.+....+ +..--...+|.++|.-|...+.+.|++.|.-
T Consensus 184 AAYFT~c~Lqp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~ 231 (320)
T 3mkr_B 184 AAYFTHSNLQPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPKP 231 (320)
T ss_dssp HHHHTTSCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCCCH
T ss_pred HHHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCH
Confidence 112222222 2223334678999999999999999998853
No 271
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=86.02 E-value=1.5 Score=40.35 Aligned_cols=66 Identities=12% Similarity=-0.068 Sum_probs=54.7
Q ss_pred hhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHH
Q 021445 213 DSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMR 292 (312)
Q Consensus 213 ~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~ 292 (312)
..+...|.-+++.|++++|++.|.++...+... .....++.+...+++..++|..|....++|..
T Consensus 132 ~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~---------------~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~ 196 (429)
T 4b4t_R 132 QAWINLGEYYAQIGDKDNAEKTLGKSLSKAIST---------------GAKIDVMLTIARLGFFYNDQLYVKEKLEAVNS 196 (429)
T ss_dssp SCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCC---------------CSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCh---------------HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 346789999999999999999999998865331 23466888999999999999999999999874
Q ss_pred c
Q 021445 293 D 293 (312)
Q Consensus 293 l 293 (312)
+
T Consensus 197 ~ 197 (429)
T 4b4t_R 197 M 197 (429)
T ss_dssp H
T ss_pred h
Confidence 4
No 272
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=85.34 E-value=0.95 Score=32.00 Aligned_cols=36 Identities=22% Similarity=0.228 Sum_probs=30.1
Q ss_pred hhhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhh
Q 021445 209 MNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDI 244 (312)
Q Consensus 209 ~~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~ 244 (312)
+..|-..--++..+.+.|+|++||.+..+|..+|..
T Consensus 12 Ln~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~e 47 (97)
T 2crb_A 12 LNLAHQQSRRADRLLAAGKYEEAISCHRKATTYLSE 47 (97)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hhhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 345555667899999999999999999999998755
No 273
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=83.96 E-value=1.9 Score=37.11 Aligned_cols=69 Identities=10% Similarity=0.010 Sum_probs=55.5
Q ss_pred hhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHcCCCch
Q 021445 219 GNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNV 298 (312)
Q Consensus 219 Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l~p~~~ 298 (312)
...+++.++.++|+......|+ -+|....+-.-+-.-+.-.|+|+.|+..++.+.+++|...
T Consensus 4 ~~~ll~~g~L~~al~~~~~~VR------------------~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~ 65 (273)
T 1zbp_A 4 WKNALSEGQLQQALELLIEAIK------------------ASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYL 65 (273)
T ss_dssp HHHHTTTTCHHHHHHHHHHHHH------------------TCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGH
T ss_pred HHHHHhCCCHHHHHHHHHHHHH------------------hCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhh
Confidence 4578899999999999999998 3444555555666677778999999999999999999888
Q ss_pred HH--HHHHH
Q 021445 299 KA--LFRQG 305 (312)
Q Consensus 299 Ka--~~rrg 305 (312)
+. .||..
T Consensus 66 ~~a~~yr~l 74 (273)
T 1zbp_A 66 PGASQLRHL 74 (273)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 75 45543
No 274
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=80.44 E-value=5.5 Score=27.92 Aligned_cols=32 Identities=25% Similarity=0.388 Sum_probs=29.2
Q ss_pred hhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHH
Q 021445 210 NAVDSIKVFGNEHYKKQDYKMALRKYRKALRY 241 (312)
Q Consensus 210 ~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~ 241 (312)
+.++.+..+|.++|+.++|.+|+..++++...
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ 82 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNL 82 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHcc
Confidence 56888899999999999999999999999973
No 275
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=80.39 E-value=2.2 Score=39.60 Aligned_cols=19 Identities=21% Similarity=0.254 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHHhhhcc
Q 021445 228 YKMALRKYRKALRYLDICW 246 (312)
Q Consensus 228 y~~A~~~Y~kal~~l~~~~ 246 (312)
-++|+++|++||++|+...
T Consensus 448 A~kAi~~Y~~Ai~~L~k~~ 466 (526)
T 2wb7_A 448 AQGAIDEYKAAINDLQKAA 466 (526)
T ss_dssp HHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhhh
Confidence 4789999999999998753
No 276
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=80.37 E-value=2.6 Score=41.32 Aligned_cols=76 Identities=16% Similarity=0.108 Sum_probs=44.9
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHH-----HhhhccccCCCCchhhhHHHHHHH-HHHhHH-HHHHHHcCCHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALR-----YLDICWEKEGIDEGKSSSLRKTKS-QIFTNS-SACKLKLGDLKGAL 284 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~-----~l~~~~~~~~~~~~~~~~~~~~~~-~~~~N~-a~~~~kl~~~~~Ai 284 (312)
...|++.|..+.+.++++.|.++|.++=. .|... ..+.+....+..... .-..|. -.+++++|++++|+
T Consensus 681 ~~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~----~~~~~~~~~~~~~a~~~~~~~~A~~~~~~~g~~~~a~ 756 (814)
T 3mkq_A 681 EMKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSS----FNNKEGLVTLAKDAETTGKFNLAFNAYWIAGDIQGAK 756 (814)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHH----TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHH
T ss_pred HhHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHH----cCCHHHHHHHHHHHHHcCchHHHHHHHHHcCCHHHHH
Confidence 44578999999999999999999998622 22111 111121111111111 111233 34788888888888
Q ss_pred HHHHHHH
Q 021445 285 LDTEFAM 291 (312)
Q Consensus 285 ~~~~~al 291 (312)
+.|.+.-
T Consensus 757 ~~~~~~~ 763 (814)
T 3mkq_A 757 DLLIKSQ 763 (814)
T ss_dssp HHHHHTT
T ss_pred HHHHHcC
Confidence 8775543
No 277
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=80.33 E-value=8.1 Score=35.14 Aligned_cols=79 Identities=16% Similarity=0.014 Sum_probs=60.5
Q ss_pred hhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHcC--
Q 021445 217 VFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDG-- 294 (312)
Q Consensus 217 ~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l~-- 294 (312)
..|.-++..|+|.+|+..+++.++.+... + -......+|...+..|..++++.++...+++|....
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~------d------d~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~a 171 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKL------D------DKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANA 171 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTS------S------CTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhcc------c------cchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhcc
Confidence 57888999999999999999999977542 1 135677899999999999999999999999887443
Q ss_pred ---CCchHHHHHHHHH
Q 021445 295 ---DDNVKALFRQGQV 307 (312)
Q Consensus 295 ---p~~~Ka~~rrg~a 307 (312)
|....|.++....
T Consensus 172 i~~~p~i~a~i~~~~G 187 (394)
T 3txn_A 172 IYCPPKVQGALDLQSG 187 (394)
T ss_dssp SCCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhh
Confidence 2234455554333
No 278
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=79.55 E-value=2.7 Score=31.75 Aligned_cols=71 Identities=10% Similarity=0.055 Sum_probs=54.3
Q ss_pred HhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHH---HHHHHHHHHHcC-C-Cc
Q 021445 223 YKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKG---ALLDTEFAMRDG-D-DN 297 (312)
Q Consensus 223 ~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~---Ai~~~~~al~l~-p-~~ 297 (312)
........+.+.|.+++. ..+.....-.|.|-|+.+-.+..+ +|..+...++-+ | ..
T Consensus 12 ~~~~~l~~~~~~y~~e~~------------------~~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~ 73 (126)
T 1nzn_A 12 VSVEDLLKFEKKFQSEKA------------------AGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQ 73 (126)
T ss_dssp HHHHHHHHHHHHHHHHHH------------------HSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHH
T ss_pred CCHHHHHHHHHHHHHHhc------------------cCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchH
Confidence 344556667777777766 122345577899999999887766 999999999987 5 67
Q ss_pred hHHHHHHHHHhhhh
Q 021445 298 VKALFRQGQVSIIL 311 (312)
Q Consensus 298 ~Ka~~rrg~a~~~L 311 (312)
-.++|-.|.++++|
T Consensus 74 Rd~lY~LAvg~ykl 87 (126)
T 1nzn_A 74 RDYVFYLAVGNYRL 87 (126)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh
Confidence 88999999999876
No 279
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=76.86 E-value=0.5 Score=40.36 Aligned_cols=38 Identities=18% Similarity=0.125 Sum_probs=0.0
Q ss_pred hhhhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhc
Q 021445 208 WMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDIC 245 (312)
Q Consensus 208 ~~~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~ 245 (312)
.++.|..+..+|.++=+.|+|++|+.+|..||++|...
T Consensus 19 ~~~~Ai~lv~~AVe~D~~g~y~eAl~lY~eaIe~Ll~a 56 (257)
T 2ymb_A 19 QSTAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQV 56 (257)
T ss_dssp --------------------------------------
T ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 45567788899999999999999999999999987653
No 280
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=75.69 E-value=4.8 Score=36.42 Aligned_cols=61 Identities=5% Similarity=-0.128 Sum_probs=51.0
Q ss_pred hhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 213 DSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 213 ~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
..+...+..+...|++.+|+....+++. ..|..-.+|.-+-.++.+.|+..+|++.+.++-
T Consensus 172 ~a~~~~~~~~l~~g~~~~a~~~l~~~~~------------------~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r 232 (388)
T 2ff4_A 172 LAHTAKAEAEIACGRASAVIAELEALTF------------------EHPYREPLWTQLITAYYLSDRQSDALGAYRRVK 232 (388)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHH------------------hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3445667778899999999999999888 566667788899999999999999999888764
No 281
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=74.53 E-value=5.3 Score=33.31 Aligned_cols=59 Identities=8% Similarity=-0.052 Sum_probs=46.2
Q ss_pred hhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHH-cCCHHHHHHHHHHHHHc
Q 021445 225 KQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLK-LGDLKGALLDTEFAMRD 293 (312)
Q Consensus 225 ~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~k-l~~~~~Ai~~~~~al~l 293 (312)
.|+-+.|...|++|.++.... .....|....+.+|.|..|+. ++++++|+..+.+|+..
T Consensus 138 ~g~~e~a~~aY~~A~~iA~~~----------L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~ 197 (227)
T 2o8p_A 138 LCSLEDSKKIHQDAFTLLCEH----------PDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKI 197 (227)
T ss_dssp SSCHHHHHHHHHHHHHHHHHC----------GGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHhh----------CCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 444688999999999975431 222467778899999999886 78999999999999753
No 282
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=74.09 E-value=8.5 Score=36.15 Aligned_cols=77 Identities=13% Similarity=0.021 Sum_probs=62.8
Q ss_pred hhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHc
Q 021445 214 SIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRD 293 (312)
Q Consensus 214 ~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l 293 (312)
-+...|+-..-...+..|...|.+|+. +.|..-..|+.+|......+++-+|+-++.++|..
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~------------------~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~ 215 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQ------------------LVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAV 215 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSS
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHH------------------hCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhc
Confidence 456678877777889999999999999 56777779999999999999999999999999977
Q ss_pred CCCchHHHHHHHHHh
Q 021445 294 GDDNVKALFRQGQVS 308 (312)
Q Consensus 294 ~p~~~Ka~~rrg~a~ 308 (312)
......|.-.....+
T Consensus 216 ~~Pf~~a~~nL~~~f 230 (497)
T 1ya0_A 216 KFPFPAASTNLQKAL 230 (497)
T ss_dssp SBCCHHHHHHHHHHH
T ss_pred CCCChhHHHHHHHHH
Confidence 766666655544443
No 283
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=72.68 E-value=7.7 Score=30.34 Aligned_cols=93 Identities=11% Similarity=0.019 Sum_probs=60.8
Q ss_pred CCChhhhhhhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHH
Q 021445 202 PNELSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLK 281 (312)
Q Consensus 202 ~~~~~~~~~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~ 281 (312)
+.+.+..+.-+..+-..|+..-. +-.+.-++.|++|+..+... . ......++.++.+-|.- ..+++.+
T Consensus 10 p~~yd~W~~yl~llE~~g~p~~d-~~l~rlrd~YerAia~~Pp~---------k-~~~wrrYI~LWIrYA~~-~ei~D~d 77 (161)
T 4h7y_A 10 ANNPEDWLSLLLKLEKNSVPLSD-ALLNKLIGRYSQAIEALPPD---------K-YGQNESFARIQVRFAEL-KAIQEPD 77 (161)
T ss_dssp CCSHHHHHHHHHHHHHHTCSCCH-HHHHHHHHHHHHHHHHSCGG---------G-GTTCHHHHHHHHHHHHH-HHHHCGG
T ss_pred CCCHHHHHHHHHHHHHcCCCchh-hHHHHHHHHHHHHHHcCCcc---------c-cccHHHHHHHHHHHHHH-HHhcCHH
Confidence 44555656666666555665333 34467778999999854321 1 22445667777777744 6778888
Q ss_pred HHHHHHHHHHHcCCCchHHHHHHHH
Q 021445 282 GALLDTEFAMRDGDDNVKALFRQGQ 306 (312)
Q Consensus 282 ~Ai~~~~~al~l~p~~~Ka~~rrg~ 306 (312)
+|-+.+..++.+....+|.|.-.|+
T Consensus 78 ~aR~vy~~a~~~hKkFAKiwi~~Aq 102 (161)
T 4h7y_A 78 DARDYFQMARANCKKFAFVHISFAQ 102 (161)
T ss_dssp GCHHHHHHHHHHCTTBHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 8888888888887777666665554
No 284
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=70.68 E-value=11 Score=32.04 Aligned_cols=53 Identities=17% Similarity=0.097 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHH-cCCHHHHHHHHHHHH
Q 021445 228 YKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLK-LGDLKGALLDTEFAM 291 (312)
Q Consensus 228 y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~k-l~~~~~Ai~~~~~al 291 (312)
-+.|...|++|+++. .. .....|....+.+|.|.-|+. ++++++|+..+.+|+
T Consensus 172 ~e~a~~aY~~A~~iA-~~----------L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Af 225 (260)
T 2npm_A 172 AEDALKAYKDATVVA-KD----------LEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAF 225 (260)
T ss_dssp HHHHHHHHHHHHHHH-TT----------SCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-Hh----------CCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 367888999999975 21 112458889999999999988 899999999999988
No 285
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=70.30 E-value=9.9 Score=31.87 Aligned_cols=54 Identities=15% Similarity=-0.006 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHH-cCCHHHHHHHHHHHH
Q 021445 228 YKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLK-LGDLKGALLDTEFAM 291 (312)
Q Consensus 228 y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~k-l~~~~~Ai~~~~~al 291 (312)
-+.|...|++|+++.... .....|....+.+|.|.-|+. ++++++|+..+.+|+
T Consensus 146 ~e~a~~aY~~A~~iA~~~----------L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~af 200 (234)
T 2br9_A 146 AENSLVAYKAASDIAMTE----------LPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAF 200 (234)
T ss_dssp HHHHHHHHHHHHHHHHHH----------SCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcc----------CCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 367888999999865321 112468888999999999888 899999999999988
No 286
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=69.99 E-value=8.8 Score=32.71 Aligned_cols=54 Identities=15% Similarity=0.026 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHH-cCCHHHHHHHHHHHH
Q 021445 228 YKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLK-LGDLKGALLDTEFAM 291 (312)
Q Consensus 228 y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~k-l~~~~~Ai~~~~~al 291 (312)
-+.|...|++|+.+.... .....|.+..+.+|.|.-|+. ++++++|+..+.+|+
T Consensus 151 ~e~a~~aY~~A~~iA~~~----------L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Af 205 (260)
T 1o9d_A 151 AESTLTAYKAAQDIATTE----------LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAF 205 (260)
T ss_dssp HHHHHHHHHHHHHHHHHH----------SCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc----------CCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 357888999999875421 112468889999999999888 799999999999887
No 287
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=68.17 E-value=12 Score=31.86 Aligned_cols=56 Identities=21% Similarity=0.150 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHhhhccccCCCCchhh--hHHHHHHHHHHhHHHHHHHH-cCCHHHHHHHHHHHHHc
Q 021445 228 YKMALRKYRKALRYLDICWEKEGIDEGKS--SSLRKTKSQIFTNSSACKLK-LGDLKGALLDTEFAMRD 293 (312)
Q Consensus 228 y~~A~~~Y~kal~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~N~a~~~~k-l~~~~~Ai~~~~~al~l 293 (312)
-+.|...|++|+++.... . ....|....+.+|.|.-|+. ++++++|+..+.+|+.-
T Consensus 168 ~e~a~~aYq~A~eiA~~~----------L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 168 IKQAVEFYEDALQRERSF----------LEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHH----------CTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh----------cCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 467889999999865321 1 22568899999999999885 89999999999999854
No 288
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=67.77 E-value=12 Score=31.86 Aligned_cols=54 Identities=15% Similarity=-0.006 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHH-cCCHHHHHHHHHHHH
Q 021445 228 YKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLK-LGDLKGALLDTEFAM 291 (312)
Q Consensus 228 y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~k-l~~~~~Ai~~~~~al 291 (312)
-+.|...|++|+++.... .....|....+.+|.|.-|+. ++++++|+..+.+|+
T Consensus 172 ~e~a~~aY~~A~~iA~~~----------L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AF 226 (261)
T 3ubw_A 172 AENSLVAYKAASDIAMTE----------LPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAF 226 (261)
T ss_dssp HHHHHHHHHHHHHHHHHH----------SCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhh----------CCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 367889999999864321 122468889999999999888 799999999999887
No 289
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=67.38 E-value=12 Score=31.54 Aligned_cols=54 Identities=11% Similarity=-0.020 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHH-cCCHHHHHHHHHHHH
Q 021445 228 YKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLK-LGDLKGALLDTEFAM 291 (312)
Q Consensus 228 y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~k-l~~~~~Ai~~~~~al 291 (312)
-+.|...|++|+++.... .....|....+.+|.|.-|+. ++++++|+..+.+|+
T Consensus 147 ~~~a~~aY~~A~~iA~~~----------L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Af 201 (248)
T 3uzd_A 147 VESSEKAYSEAHEISKEH----------MQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAF 201 (248)
T ss_dssp HHHHHHHHHHHHHHHHHH----------SCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhh----------CCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 367888999999865321 112468889999999998888 799999999999887
No 290
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=66.90 E-value=28 Score=33.77 Aligned_cols=80 Identities=13% Similarity=0.018 Sum_probs=55.1
Q ss_pred HHHHHHHHHHhhhcccc-CCCCchhhhH-HHHH--HHHHHhHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHHHHH
Q 021445 232 LRKYRKALRYLDICWEK-EGIDEGKSSS-LRKT--KSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQV 307 (312)
Q Consensus 232 ~~~Y~kal~~l~~~~~~-~~~~~~~~~~-~~~~--~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l~p~~~Ka~~rrg~a 307 (312)
...|+..+-.++..|.. ....+.+... +-+. -......+|...+.-|+|.-|.+.++.++..+|+|..|..-+|.|
T Consensus 413 r~vy~~y~Gw~dgnp~~l~~l~p~~~a~~~v~~~gg~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~ 492 (658)
T 2cfu_A 413 RAVLNRYLGYYDGNPATLDPLSPEDSAGRYVEYMGGAERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADA 492 (658)
T ss_dssp HHHHHHHHCSCCSCGGGTSCCCHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHhcCcccCCcccccCCChHHHHHHHHHHhcCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 34466666655554422 2233333211 1111 023456788889999999999999999999999999999999999
Q ss_pred hhhh
Q 021445 308 SIIL 311 (312)
Q Consensus 308 ~~~L 311 (312)
|.+|
T Consensus 493 ~~~l 496 (658)
T 2cfu_A 493 LEQL 496 (658)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9876
No 291
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=64.94 E-value=15 Score=29.29 Aligned_cols=76 Identities=12% Similarity=-0.005 Sum_probs=44.3
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHH-----HhhhccccCCCCchhhhHHHHH--HHHHHhHHHHHHHHcCCHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALR-----YLDICWEKEGIDEGKSSSLRKT--KSQIFTNSSACKLKLGDLKGA 283 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~-----~l~~~~~~~~~~~~~~~~~~~~--~~~~~~N~a~~~~kl~~~~~A 283 (312)
....|+..|..+.++|+++-|.++|.++=. +|... ..+.+....+... ...-++-.-.|++.+|+++++
T Consensus 33 ~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~~L~~Ly~~----tg~~e~L~kla~iA~~~g~~n~af~~~l~lGdv~~~ 108 (177)
T 3mkq_B 33 DSITWERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLV----TGDVNKLSKMQNIAQTREDFGSMLLNTFYNNSTKER 108 (177)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHH----HTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHH
T ss_pred CHHHHHHHHHHHHHcCChHHHHHHHHHhCCHHHHHHHHHH----hCCHHHHHHHHHHHHHCccHHHHHHHHHHcCCHHHH
Confidence 455799999999999999999999988633 21110 0010110111100 000123335677788888888
Q ss_pred HHHHHHH
Q 021445 284 LLDTEFA 290 (312)
Q Consensus 284 i~~~~~a 290 (312)
++.+.+.
T Consensus 109 i~lL~~~ 115 (177)
T 3mkq_B 109 SSIFAEG 115 (177)
T ss_dssp HHHHHHT
T ss_pred HHHHHHC
Confidence 8766443
No 292
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=64.11 E-value=16 Score=30.70 Aligned_cols=54 Identities=11% Similarity=0.033 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHH-cCCHHHHHHHHHHHH
Q 021445 228 YKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLK-LGDLKGALLDTEFAM 291 (312)
Q Consensus 228 y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~k-l~~~~~Ai~~~~~al 291 (312)
-+.|...|++|+++.... .....|....+.+|.|.-|+. ++++++|+..+.+|+
T Consensus 149 ~e~a~~aY~~A~~iA~~~----------L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Af 203 (236)
T 3iqu_A 149 IDSARSAYQEAMDISKKE----------MPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTF 203 (236)
T ss_dssp HHHHHHHHHHHHHHHHHH----------SCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhh----------CCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 467888999999865321 112458889999999999885 689999999999887
No 293
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=63.36 E-value=5.6 Score=26.85 Aligned_cols=28 Identities=18% Similarity=0.269 Sum_probs=25.1
Q ss_pred hHhhhhhHHhhhcHHHHHHHHHHHHHHh
Q 021445 215 IKVFGNEHYKKQDYKMALRKYRKALRYL 242 (312)
Q Consensus 215 ~k~~Gn~~~~~~~y~~A~~~Y~kal~~l 242 (312)
-.+.|..+..+|++++|+.++.+||.++
T Consensus 20 eV~~GE~L~~~g~~~~~~~hf~nAl~Vc 47 (73)
T 3ax2_A 20 EIQLGEELLAQGDYEKGVDHLTNAIAVC 47 (73)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHc
Confidence 3678999999999999999999999865
No 294
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=62.27 E-value=14 Score=36.16 Aligned_cols=59 Identities=5% Similarity=-0.109 Sum_probs=41.5
Q ss_pred hhhhhHHhhhcHHHHH-HHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHc
Q 021445 217 VFGNEHYKKQDYKMAL-RKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRD 293 (312)
Q Consensus 217 ~~Gn~~~~~~~y~~A~-~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l 293 (312)
..+.-+...++..+|+ ..|.+|+.. .|....+++..|....+.+++++|.+.++++|..
T Consensus 348 ~ya~~~~~~~~~~~a~r~il~rAi~~------------------~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek~l~~ 407 (679)
T 4e6h_A 348 NMANYQGEKNTDSTVITKYLKLGQQC------------------IPNSAVLAFSLSEQYELNTKIPEIETTILSCIDR 407 (679)
T ss_dssp HHHHHHHHHSCCTTHHHHHHHHHHHH------------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHh------------------CCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 3333344455555665 666666663 2334567889999999999999999999999974
No 295
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=61.42 E-value=22 Score=24.87 Aligned_cols=68 Identities=13% Similarity=0.081 Sum_probs=42.0
Q ss_pred hhhhhhHhhhhhHHhh---hcHHHHHHHHHHHHHHhhhccc-cCCCCchhhhHHHHHHHHHHhHHHHHHHHc
Q 021445 210 NAVDSIKVFGNEHYKK---QDYKMALRKYRKALRYLDICWE-KEGIDEGKSSSLRKTKSQIFTNSSACKLKL 277 (312)
Q Consensus 210 ~~~~~~k~~Gn~~~~~---~~y~~A~~~Y~kal~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl 277 (312)
+.|-.+.++|-..=.. |+-++|+..|+++|..|..... .-....+++.....+....-.|+..+.-+|
T Consensus 14 ~~AF~~Is~aL~~DE~~~~G~k~~A~~~YkkGi~eL~~Gi~V~~~g~G~~we~Ar~LQ~KM~~nL~~v~~RL 85 (89)
T 3eab_A 14 KQAFEYISIALRIDEDEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQCERARRLQAKMMTNLVMAKDRL 85 (89)
T ss_dssp HHHHHHHHHHHHHHHHSCSSSGGGSHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHhhcCCccCCCChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455555555555 7778889999999887766332 112244555556666666777777766554
No 296
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=61.17 E-value=18 Score=35.28 Aligned_cols=72 Identities=6% Similarity=-0.029 Sum_probs=54.0
Q ss_pred hHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCC---HHHHHHHHHHHH
Q 021445 215 IKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGD---LKGALLDTEFAM 291 (312)
Q Consensus 215 ~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~---~~~Ai~~~~~al 291 (312)
|....+.+-+.+.+..|...|.++|.. -|....++..-+..-++.++ ++.+...+++||
T Consensus 69 W~~yi~~~~~~~~~~~aR~vyEraL~~------------------fP~~~~lW~~Yi~~E~~~~~~~~~~~v~~lfeRal 130 (679)
T 4e6h_A 69 YVKLLKHHVSLKQWKQVYETFDKLHDR------------------FPLMANIWCMRLSLEFDKMEELDAAVIEPVLARCL 130 (679)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH------------------CTTCHHHHHHHHHHHHTC--CCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHH------------------CCCCHHHHHHHHHHHHhhCCcchHHHHHHHHHHHH
Confidence 444444455567899999999999994 45566778888888888888 999999999999
Q ss_pred HcCC--CchHHHHHH
Q 021445 292 RDGD--DNVKALFRQ 304 (312)
Q Consensus 292 ~l~p--~~~Ka~~rr 304 (312)
..-| .+++.|...
T Consensus 131 ~~~~~~~sv~LW~~Y 145 (679)
T 4e6h_A 131 SKELGNNDLSLWLSY 145 (679)
T ss_dssp CSSSCCCCHHHHHHH
T ss_pred HhcCCCCCHHHHHHH
Confidence 9884 677766543
No 297
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=60.95 E-value=18 Score=33.71 Aligned_cols=45 Identities=13% Similarity=0.064 Sum_probs=37.0
Q ss_pred HHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHHHH
Q 021445 261 KTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQ 306 (312)
Q Consensus 261 ~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l~p~~~Ka~~rrg~ 306 (312)
|....++.+.+.-+.+.++.++|...+.+|+.. |.+...++..+.
T Consensus 210 p~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~ 254 (493)
T 2uy1_A 210 YYAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGL 254 (493)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHh
Confidence 344678999999999999999999999999999 988766654433
No 298
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=60.67 E-value=16 Score=25.76 Aligned_cols=29 Identities=14% Similarity=0.028 Sum_probs=25.0
Q ss_pred HHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 263 KSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 263 ~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
.+..+.-||..+++-|+|++||++-.+|.
T Consensus 14 ~AH~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 14 LAHQQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhhHhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 46678899999999999999998777665
No 299
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=59.80 E-value=14 Score=26.20 Aligned_cols=39 Identities=13% Similarity=0.081 Sum_probs=29.5
Q ss_pred hhhhhhhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhh
Q 021445 205 LSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLD 243 (312)
Q Consensus 205 ~~~~~~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~ 243 (312)
.+++-+--..-.+.|..+..+|+++.|+.++.+||.++.
T Consensus 13 ~e~~e~~Fl~eV~lGE~L~~~g~~e~av~Hf~nAl~Vc~ 51 (95)
T 1om2_A 13 AEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCG 51 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcC
Confidence 333333334446889999999999999999999998763
No 300
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=58.34 E-value=10 Score=30.35 Aligned_cols=26 Identities=27% Similarity=0.156 Sum_probs=22.9
Q ss_pred HHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 266 IFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 266 ~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
...--++||.++++|.+|+...+..|
T Consensus 64 s~YYk~LCy~klKdYkkA~~~le~il 89 (242)
T 3kae_A 64 SKYYESLCYKKKKDYKKAIKSLESIL 89 (242)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33447899999999999999999999
No 301
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=55.73 E-value=26 Score=32.19 Aligned_cols=80 Identities=11% Similarity=-0.019 Sum_probs=48.6
Q ss_pred hHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccC-----CCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHH
Q 021445 215 IKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKE-----GIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEF 289 (312)
Q Consensus 215 ~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~ 289 (312)
+...++...+.++|.||.-++.....++......- ....-...........+|...+..+.+-+.|+.|+..|..
T Consensus 38 l~~L~~~h~~~~ny~EAa~~l~lhA~l~~w~~~~~~~~~~~~~~~~~qt~~~~ke~L~~~~i~~f~kg~~~E~ai~l~k~ 117 (436)
T 2yin_A 38 LYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTHRQLKETLYETIIGYFDKGKMWEEAISLCKE 117 (436)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSCCC--------------CHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHCcCHHHHHHHHHHHHHHhCCCccccCcccccCCCCccccHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 45668888899999999999866555554421110 0000000111223344566666666677899999999999
Q ss_pred HHHcC
Q 021445 290 AMRDG 294 (312)
Q Consensus 290 al~l~ 294 (312)
++..-
T Consensus 118 L~~~y 122 (436)
T 2yin_A 118 LAEQY 122 (436)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98543
No 302
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=55.70 E-value=50 Score=23.09 Aligned_cols=47 Identities=19% Similarity=0.167 Sum_probs=36.9
Q ss_pred cCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHcC
Q 021445 248 KEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDG 294 (312)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l~ 294 (312)
.+...+....-+....+....--|--++++++|.+|+-.+.+++.+.
T Consensus 37 kn~Lkel~~~ll~e~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~t 83 (106)
T 2vkj_A 37 KEGLKIEGMELLKEKKARSLIAEGKDLFETANYGEALVFFEKALNLS 83 (106)
T ss_dssp HHTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HcCcchhhHHHHhhhHHHHHHHHHHHHHHhcchhHHHHHHHHHHccc
Confidence 34444445445677778888888999999999999999999999654
No 303
>2k9u_B Filamin-binding LIM protein 1; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=55.69 E-value=6.6 Score=20.34 Aligned_cols=20 Identities=30% Similarity=0.310 Sum_probs=13.8
Q ss_pred eecCCCCCCCceEEEecCCC
Q 021445 108 MANAGPNTNGSQFFITTTRT 127 (312)
Q Consensus 108 ~~~~~~~~~~sqF~I~~~~~ 127 (312)
|+........|..||||.+.
T Consensus 1 ma~kpeKR~aSSvFITLapp 20 (26)
T 2k9u_B 1 MASKPEKRVASSVFITLAPP 20 (26)
T ss_dssp CCCCSSSSCEEEEEEEECCS
T ss_pred CCCcchhheeeeEEEEecCc
Confidence 34434456678899999874
No 304
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=55.57 E-value=2.5 Score=39.14 Aligned_cols=38 Identities=18% Similarity=0.264 Sum_probs=0.0
Q ss_pred hhhhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhc
Q 021445 208 WMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDIC 245 (312)
Q Consensus 208 ~~~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~ 245 (312)
.++.|..+..+|..+=+.|+|++|+.+|.+|+++|...
T Consensus 7 ~~~~A~~~~~~Av~~D~~g~~~eA~~~Y~~a~~~l~~~ 44 (444)
T 2zan_A 7 NLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHV 44 (444)
T ss_dssp --------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 45577778888999999999999999999999988664
No 305
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=55.39 E-value=61 Score=25.30 Aligned_cols=71 Identities=10% Similarity=0.106 Sum_probs=47.4
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHH-hHHHHHHHHcCCHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIF-TNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
...-...|-.+|..|+|-+|-+....+-.- .....++. .-....+. +--|..+++.|++..|...+.++
T Consensus 32 ~~~~~~~~i~lFn~g~yfeaHEvLEe~W~~-------~~~~~~er---~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~A 101 (161)
T 2ijq_A 32 LRRAVVHGVRLYNSGEFHESHDCFEDEWYN-------YGRGNTES---KFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTS 101 (161)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTTT-------TCSSSHHH---HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhCCCchHHHHHHHHHHHh-------cCCCchHH---HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 334567899999999999999888777652 11111111 11222233 44566667789999999999999
Q ss_pred HH
Q 021445 291 MR 292 (312)
Q Consensus 291 l~ 292 (312)
+.
T Consensus 102 l~ 103 (161)
T 2ijq_A 102 LQ 103 (161)
T ss_dssp HH
T ss_pred HH
Confidence 85
No 306
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=53.10 E-value=30 Score=35.18 Aligned_cols=95 Identities=11% Similarity=-0.062 Sum_probs=59.9
Q ss_pred HhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhh-----HHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 216 KVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSS-----SLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 216 k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.-+|..+...|++++|..+|+||-.-+...........+... +........|++.+..+-+.+-|+.+++.|..|
T Consensus 844 yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lA 923 (950)
T 4gq2_M 844 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 923 (950)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 567888889999999999998875432111000000000000 112234458899999999999999999999999
Q ss_pred HHc-CCCchH----HHHHHHHHhhh
Q 021445 291 MRD-GDDNVK----ALFRQGQVSII 310 (312)
Q Consensus 291 l~l-~p~~~K----a~~rrg~a~~~ 310 (312)
|+. ++++.. .|.|.=++..+
T Consensus 924 I~~~~~dd~~l~~~l~~r~f~~a~a 948 (950)
T 4gq2_M 924 DASKETDDEDLSIAITHETLKTACA 948 (950)
T ss_dssp HHTCCSCCHHHHHHHHHHHHHHHHH
T ss_pred HhhcccCCccchHHHHHHHHHHHhh
Confidence 964 344443 55555555443
No 307
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=52.55 E-value=27 Score=23.76 Aligned_cols=32 Identities=16% Similarity=0.145 Sum_probs=26.6
Q ss_pred hhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhc
Q 021445 214 SIKVFGNEHYKKQDYKMALRKYRKALRYLDIC 245 (312)
Q Consensus 214 ~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~ 245 (312)
.-...|.++-..|+|+.|+.+|+.+++.++..
T Consensus 14 e~~k~ARe~Al~GnYdta~~yY~g~~~qI~k~ 45 (78)
T 2rpa_A 14 ENVKLAREYALLGNYDSAMVYYQGVLDQMNKY 45 (78)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcChHHHHHHHHHHHHHHHHH
Confidence 34567788888999999999999999977664
No 308
>2jpu_A ORF C02003 protein; solution structure, SSR10, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Sulfolobus solfataricus} PDB: 2q00_A
Probab=50.94 E-value=14 Score=27.93 Aligned_cols=33 Identities=24% Similarity=0.156 Sum_probs=28.4
Q ss_pred hhhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHH
Q 021445 209 MNAVDSIKVFGNEHYKKQDYKMALRKYRKALRY 241 (312)
Q Consensus 209 ~~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~ 241 (312)
++.+.++.++|..++.+|+..+|.++|=+|.+.
T Consensus 4 l~lAe~yL~EA~ell~kGD~vQAsEK~ykAaee 36 (129)
T 2jpu_A 4 STSAEVYYEEAEEFLSKGDLVQACEKYYKAAEE 36 (129)
T ss_dssp SCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 457888999999999999999999999877763
No 309
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=43.69 E-value=61 Score=29.62 Aligned_cols=31 Identities=16% Similarity=-0.007 Sum_probs=26.4
Q ss_pred HHHHHhHHHHHHHHcCCHHHHHHHHHHHHHc
Q 021445 263 KSQIFTNSSACKLKLGDLKGALLDTEFAMRD 293 (312)
Q Consensus 263 ~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l 293 (312)
+..++.=+|.+|+-+++|++|+..|++++..
T Consensus 189 k~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 189 KYAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 4456777888999999999999999999963
No 310
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=41.47 E-value=68 Score=29.40 Aligned_cols=31 Identities=26% Similarity=0.184 Sum_probs=26.2
Q ss_pred HHHHHhHHHHHHHHcCCHHHHHHHHHHHHHc
Q 021445 263 KSQIFTNSSACKLKLGDLKGALLDTEFAMRD 293 (312)
Q Consensus 263 ~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l 293 (312)
+..++.=+|.+|+-+++|++|+..|++++..
T Consensus 195 k~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 195 RWAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 4456677888999999999999999999963
No 311
>1zx8_A Hypothetical protein TM1367; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: 1PE; 1.90A {Thermotoga maritima} SCOP: b.62.1.3 PDB: 2ka0_A
Probab=40.30 E-value=24 Score=26.82 Aligned_cols=96 Identities=15% Similarity=0.175 Sum_probs=55.2
Q ss_pred eEEEEEEeCCCCchhHHhHHHHhhCCCCCCCCCCCCceecCCEEEEeecCCeEEeCCCCCCCCCCCCcccCCCCCCCccc
Q 021445 18 GRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKGVRFHRVIKGFMIQGGDISAGDGTGGESIYGLKFEDENFE 97 (312)
Q Consensus 18 G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~~Y~g~~~~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e~~~ 97 (312)
..++++|+.. |.|++.|.++-=-.-.. -.| |..++--.|-.. . . +|+.
T Consensus 22 ~~v~a~L~Dn--p~Ta~~~~~~LPl~~~~-------~~~-g~E~y~~~p~~l-~-------------------~-~e~~- 69 (136)
T 1zx8_A 22 GKCVIDLNEE--YEVVKLLKEKIPFESVV-------NTW-GEEIYFSTPVNV-Q-------------------K-MENP- 69 (136)
T ss_dssp CEEEEEEETT--SHHHHHHHHHCSEEEEC-------EES-SSEEEEECSCCC-C-------------------C-CSSE-
T ss_pred cEEEEEEcCC--HHHHHHHHHHCCcEEEH-------HHh-CCcEEEECCccC-C-------------------C-CCCC-
Confidence 5799999766 88999999874221000 023 233333223221 0 0 0111
Q ss_pred ccCCCcceEEeecCCCCCCCceEEEecCCCCCCCC------CCceEEEEEeChHHHHHH
Q 021445 98 LKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDG------KHVVFGRVIKGMGVVRSI 150 (312)
Q Consensus 98 ~~~~~~G~l~~~~~~~~~~~sqF~I~~~~~~~ld~------~~~vfG~V~~G~~vl~~i 150 (312)
..-...|-|+.-..+. .|.|-.++.|...+ .-.+||+|.+|++.+..+
T Consensus 70 ~~~~~~GDIaYw~pgg-----~LaIFyg~~p~s~~e~~~a~~v~~lGrI~~~l~~l~~v 123 (136)
T 1zx8_A 70 REVVEIGDVGYWPPGK-----ALCLFFGKTPMSDDKIQPASAVNVIGKIVEGLEDLKKI 123 (136)
T ss_dssp ESSBCTTEEEEEGGGT-----EEEEESSCCTTCSSSBCCSSCEEEEEEEEECGGGGGGC
T ss_pred CccCCCCcEEEeCCCC-----EEEEEeCCCccccCccccCcCcEEEEEEccCHHHHhhC
Confidence 1123578888877654 37887777653332 357999999998776555
No 312
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=40.03 E-value=42 Score=26.18 Aligned_cols=56 Identities=16% Similarity=0.059 Sum_probs=46.5
Q ss_pred hhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHcCCCc
Q 021445 224 KKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDN 297 (312)
Q Consensus 224 ~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l~p~~ 297 (312)
.-++.++|.+.|+.|+... ...+.+|.-.|.--+++|+..+|.+-.-+|+.+.|..
T Consensus 72 ei~D~d~aR~vy~~a~~~h------------------KkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~ 127 (161)
T 4h7y_A 72 AIQEPDDARDYFQMARANC------------------KKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVP 127 (161)
T ss_dssp HHHCGGGCHHHHHHHHHHC------------------TTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBC
T ss_pred HhcCHHHHHHHHHHHHHHh------------------HHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCc
Confidence 3478889999999999841 1127788899999999999999999999999988753
No 313
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=39.97 E-value=79 Score=25.31 Aligned_cols=82 Identities=12% Similarity=-0.091 Sum_probs=48.1
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhh---HHH-HHHHHHHhHHHHHHHHcCCHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSS---SLR-KTKSQIFTNSSACKLKLGDLKGALLD 286 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~---~~~-~~~~~~~~N~a~~~~kl~~~~~Ai~~ 286 (312)
.+....=+.--+.+.++|..|+.+.++.|.- .-.++++-+... -++ ...--.++-+|..+-++++-++||.+
T Consensus 61 T~Ts~YYk~LCy~klKdYkkA~~~le~il~~----kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y 136 (242)
T 3kae_A 61 TCTSKYYESLCYKKKKDYKKAIKSLESILEG----KVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGH 136 (242)
T ss_dssp BHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT----CSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----ccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhH
Confidence 3444444555566777777777777777630 001111110000 001 11222566788889999999999999
Q ss_pred HHHHHHcCCC
Q 021445 287 TEFAMRDGDD 296 (312)
Q Consensus 287 ~~~al~l~p~ 296 (312)
+......+|-
T Consensus 137 ~~~Sf~~~~l 146 (242)
T 3kae_A 137 YVRSFGKSFL 146 (242)
T ss_dssp HHHHHHHCCC
T ss_pred hhhhcCCccc
Confidence 9998876653
No 314
>1vh6_A Flagellar protein FLIS; structural genomics, unknown function; HET: MSE; 2.50A {Bacillus subtilis} SCOP: a.24.19.1
Probab=38.89 E-value=97 Score=23.60 Aligned_cols=68 Identities=10% Similarity=0.022 Sum_probs=41.8
Q ss_pred hhhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHH
Q 021445 209 MNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLK 276 (312)
Q Consensus 209 ~~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~k 276 (312)
++.+-+...++..+..+++++++-..-.||+.++......-+.+.|-...+..++.-+...+..+.++
T Consensus 30 ydgal~~l~~A~~aie~~d~~~k~~~i~KA~~Ii~eL~~sLd~egeiA~nL~~LY~y~~~~L~~Ani~ 97 (145)
T 1vh6_A 30 YNGCLKFIRLAAQAIENDDMERKNENLIKAQNIIQELNFTLNRNIELSASMGAMYDYMYRRLVQANIK 97 (145)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHhh
Confidence 45677778899999999999999999999998875532211111222333444444344444444444
No 315
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=38.73 E-value=42 Score=25.72 Aligned_cols=42 Identities=10% Similarity=0.016 Sum_probs=37.2
Q ss_pred CCChhhhhhhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhh
Q 021445 202 PNELSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLD 243 (312)
Q Consensus 202 ~~~~~~~~~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~ 243 (312)
.-++...+..+..+..+|..+...|+++.|.-.|.+.+.++-
T Consensus 30 ~i~l~~ylrta~~llr~A~~y~~egd~e~AYily~R~~~L~~ 71 (146)
T 2xze_A 30 DIPPRRYFRSGVEIIRMASIYSEEGNIEHAFILYNKYITLFI 71 (146)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 345777889999999999999999999999999999888763
No 316
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=37.99 E-value=87 Score=21.46 Aligned_cols=28 Identities=7% Similarity=-0.098 Sum_probs=18.4
Q ss_pred HHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 264 SQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 264 ~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
..-+..+|.-.-+.|+|++|+..+..++
T Consensus 16 A~~lv~~Ave~D~~g~y~eAl~lY~~Ai 43 (86)
T 4a5x_A 16 AATVLKRAVELDSESRYPQALVCYQEGI 43 (86)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3345566666677777777777666666
No 317
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=37.63 E-value=72 Score=29.30 Aligned_cols=31 Identities=13% Similarity=0.055 Sum_probs=26.5
Q ss_pred HHHHHhHHHHHHHHcCCHHHHHHHHHHHHHc
Q 021445 263 KSQIFTNSSACKLKLGDLKGALLDTEFAMRD 293 (312)
Q Consensus 263 ~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l 293 (312)
+..++.=+|.+|+-+++|++|+..|+++|..
T Consensus 201 k~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 201 YWAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 4456677888999999999999999999964
No 318
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=37.34 E-value=42 Score=23.25 Aligned_cols=40 Identities=18% Similarity=0.107 Sum_probs=33.2
Q ss_pred hhhhhhhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhh
Q 021445 205 LSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDI 244 (312)
Q Consensus 205 ~~~~~~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~ 244 (312)
.++.++.|....+.|.-++++|++..|+.++.-|-..|+.
T Consensus 28 a~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa~GwLDA 67 (86)
T 2oo2_A 28 DEGFMRNIEAYISDSRYFLEKGDLVRAFECVVWAWAWLEI 67 (86)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 3566778889999999999999999999998877766543
No 319
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=36.73 E-value=33 Score=33.23 Aligned_cols=26 Identities=15% Similarity=-0.013 Sum_probs=22.8
Q ss_pred HHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 265 QIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 265 ~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
..|.++|..+++.++++.|++++.++
T Consensus 682 ~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 682 MKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 47889999999999999999988876
No 320
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=35.88 E-value=46 Score=23.13 Aligned_cols=39 Identities=13% Similarity=-0.119 Sum_probs=32.1
Q ss_pred hhhhhhhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhh
Q 021445 205 LSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLD 243 (312)
Q Consensus 205 ~~~~~~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~ 243 (312)
.++.++.|....+.|.-++++|++..|+.++.-|-..|+
T Consensus 32 a~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa~GwLD 70 (87)
T 2pmr_A 32 EEAVVERALNYRDDSVYYLEKGDHITSFGCITYAHGLLD 70 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 356677888899999999999999999999887766543
No 321
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=35.28 E-value=1e+02 Score=28.28 Aligned_cols=31 Identities=16% Similarity=0.026 Sum_probs=26.8
Q ss_pred HHHHHhHHHHHHHHcCCHHHHHHHHHHHHHc
Q 021445 263 KSQIFTNSSACKLKLGDLKGALLDTEFAMRD 293 (312)
Q Consensus 263 ~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l 293 (312)
+..++.=+|.+|+.+++|++|+..|++++..
T Consensus 190 k~aA~aLlARvyL~~~~~~~A~~~a~~vi~~ 220 (460)
T 3snx_A 190 TDVVNGLMARAYLLTGQWGEAAKAAEAARKG 220 (460)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 4557777899999999999999999999964
No 322
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=34.91 E-value=2e+02 Score=26.12 Aligned_cols=69 Identities=10% Similarity=-0.071 Sum_probs=50.7
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.+.-....++-++.+|+|.+|.........-... .. -...+..+++--...|+..++|.+|-...+++
T Consensus 136 rarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~-----~~-------~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki 203 (445)
T 4b4t_P 136 RARVTKDLVEIKKEEGKIDEAADILCELQVETYG-----SM-------EMSEKIQFILEQMELSILKGDYSQATVLSRKI 203 (445)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCS-----SS-------CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHh-----cc-------cHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 4444566788889999999999887776542111 01 13456677888889999999999999999987
Q ss_pred H
Q 021445 291 M 291 (312)
Q Consensus 291 l 291 (312)
.
T Consensus 204 ~ 204 (445)
T 4b4t_P 204 L 204 (445)
T ss_dssp H
T ss_pred H
Confidence 4
No 323
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=34.74 E-value=40 Score=35.01 Aligned_cols=77 Identities=12% Similarity=-0.058 Sum_probs=51.2
Q ss_pred HhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHH---------HHHHHHHhHHHHHHHHcCCHHHHHHH
Q 021445 216 KVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLR---------KTKSQIFTNSSACKLKLGDLKGALLD 286 (312)
Q Consensus 216 k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~---------~~~~~~~~N~a~~~~kl~~~~~Ai~~ 286 (312)
.-.|..++..|++++|.++|.+|-.-+.... .......... ......|...+..+-+.+.++.+++.
T Consensus 846 yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~----~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~f 921 (1139)
T 4fhn_B 846 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHT----SQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEF 921 (1139)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCSCTTCC----CSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHhhhhcccc----hhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 4567778889999999999988855332211 0000001111 11234678888888899999999999
Q ss_pred HHHHHHcCCC
Q 021445 287 TEFAMRDGDD 296 (312)
Q Consensus 287 ~~~al~l~p~ 296 (312)
+..||+..+.
T Consensus 922 a~lAi~~~~~ 931 (1139)
T 4fhn_B 922 SLLADASKET 931 (1139)
T ss_dssp HHHHHHHCCS
T ss_pred HHHHHHhccC
Confidence 9999976643
No 324
>3ebb_A Phospholipase A2-activating protein; armadillo repeat, structural genomics consortium, SGC, WD repeat, acetylation, ATP-binding; 1.90A {Homo sapiens}
Probab=34.51 E-value=2.2e+02 Score=24.45 Aligned_cols=53 Identities=15% Similarity=0.056 Sum_probs=39.0
Q ss_pred HHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHc--CCCchHHHHHHHHHhhh
Q 021445 258 SLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRD--GDDNVKALFRQGQVSII 310 (312)
Q Consensus 258 ~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l--~p~~~Ka~~rrg~a~~~ 310 (312)
.+.-..+.++.|+|....+..+.+++...+..+..+ ...+..|+||.-.|+-.
T Consensus 206 nl~iA~ATl~~NlAv~~~~~~~~~~~~~ll~~l~~il~~~~d~EalyR~LvALGt 260 (304)
T 3ebb_A 206 NIHIALATLALNYSVCFHKDHNIEGKAQCLSLISTILEVVQDLEATFRLLVALGT 260 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Confidence 366677889999999999988877666654433322 34688999999888743
No 325
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=34.34 E-value=1.5e+02 Score=26.90 Aligned_cols=72 Identities=14% Similarity=-0.047 Sum_probs=52.2
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
.++-+..+..-++..++|..|...++++....... .. ...+....+.-.+..+...++|.+|..++-.+
T Consensus 176 kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~----~~-------~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~ 244 (445)
T 4b4t_P 176 KIQFILEQMELSILKGDYSQATVLSRKILKKTFKN----PK-------YESLKLEYYNLLVKISLHKREYLEVAQYLQEI 244 (445)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS----SC-------CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhccc----CC-------cHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 34445667777888999999999999886432211 00 23455667777888889999999999999999
Q ss_pred HHc
Q 021445 291 MRD 293 (312)
Q Consensus 291 l~l 293 (312)
+..
T Consensus 245 ~~~ 247 (445)
T 4b4t_P 245 YQT 247 (445)
T ss_dssp HHH
T ss_pred Hhc
Confidence 843
No 326
>3iqc_A FLIS, flagellar protein; chaperone, flagellum; 2.70A {Helicobacter pylori} SCOP: a.24.19.0 PDB: 3k1i_A
Probab=33.23 E-value=1.5e+02 Score=22.06 Aligned_cols=81 Identities=4% Similarity=-0.058 Sum_probs=48.9
Q ss_pred hhhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHH--HhHHHHHHHHcCCHHHHHHH
Q 021445 209 MNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQI--FTNSSACKLKLGDLKGALLD 286 (312)
Q Consensus 209 ~~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~N~a~~~~kl~~~~~Ai~~ 286 (312)
++.+-+...++..+..+++++++-..-.||+.++... ....+.+...++...+..+ |.++-+....+++-.+.++.
T Consensus 33 ydgal~~l~~A~~ai~~~d~~~k~~~i~KA~~Ii~~L--~~sLd~e~GgeiA~nL~~LY~y~~~~L~~An~~~d~~~l~e 110 (131)
T 3iqc_A 33 YEGILRFSSQAKRCIENEDIEKKIYYINRVTDIFTEL--LNILDYEKGGEVAVYLTGLYTHQIKVLTQANVENDASKIDL 110 (131)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--HHTBCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH--HHhcCCccccHHHHHHHHHHHHHHHHHHHhhhhcCHHHHHH
Confidence 4567777888999999999999999999999987654 2233333322333333333 33344444444444445554
Q ss_pred HHHHH
Q 021445 287 TEFAM 291 (312)
Q Consensus 287 ~~~al 291 (312)
+...|
T Consensus 111 v~~ll 115 (131)
T 3iqc_A 111 VLNVA 115 (131)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44444
No 327
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=32.64 E-value=1.4e+02 Score=24.01 Aligned_cols=45 Identities=13% Similarity=-0.072 Sum_probs=35.5
Q ss_pred HHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHHHH
Q 021445 262 TKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQ 306 (312)
Q Consensus 262 ~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l~p~~~Ka~~rrg~ 306 (312)
.....+.-+|..++-.++|.+|-++..+|++.-|.......++..
T Consensus 12 q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL 56 (203)
T 3t5x_A 12 QRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMIL 56 (203)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHH
Confidence 345567779999999999999999999999988876655444443
No 328
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=32.62 E-value=94 Score=28.97 Aligned_cols=47 Identities=6% Similarity=-0.157 Sum_probs=38.7
Q ss_pred HHHHHhHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHHHHHhh
Q 021445 263 KSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQVSI 309 (312)
Q Consensus 263 ~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l~p~~~Ka~~rrg~a~~ 309 (312)
...++.++|-..-....+..|...+.+|+.+.|.+..+|...|....
T Consensus 151 ~hr~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~ 197 (497)
T 1ya0_A 151 CQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILAS 197 (497)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHH
T ss_pred HHHHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHh
Confidence 34566677777777778999999999999999999999998887653
No 329
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=32.31 E-value=41 Score=31.28 Aligned_cols=32 Identities=9% Similarity=-0.034 Sum_probs=27.1
Q ss_pred HHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHc
Q 021445 262 TKSQIFTNSSACKLKLGDLKGALLDTEFAMRD 293 (312)
Q Consensus 262 ~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l 293 (312)
.+..++.=+|.+|+-+++|++|+..|++++..
T Consensus 201 tk~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 201 DNEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 34557777889999999999999999999964
No 330
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=37.10 E-value=10 Score=36.99 Aligned_cols=46 Identities=15% Similarity=0.025 Sum_probs=41.9
Q ss_pred HHhHHHHHHHHcCCHHHHHHHHHHHHHcCCCchHHHHHHHHHhhhh
Q 021445 266 IFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQVSIIL 311 (312)
Q Consensus 266 ~~~N~a~~~~kl~~~~~Ai~~~~~al~l~p~~~Ka~~rrg~a~~~L 311 (312)
..+.+|...+..|+|.-|++.++.++..+|+|..|..-+|.||.+|
T Consensus 463 ~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l 508 (668)
T 2yhe_A 463 AVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQL 508 (668)
Confidence 4567888889999999999999999999999999999999998765
No 331
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=30.22 E-value=81 Score=21.95 Aligned_cols=24 Identities=8% Similarity=-0.099 Sum_probs=12.0
Q ss_pred hHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 268 TNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 268 ~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
.++|.-.-+.++|++|+..+..++
T Consensus 19 v~~Ave~D~~g~y~eAl~~Y~~Ai 42 (93)
T 1wfd_A 19 LKRAVELDAESRYQQALVCYQEGI 42 (93)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHH
Confidence 344444445555555555555444
No 332
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=29.44 E-value=76 Score=23.24 Aligned_cols=18 Identities=6% Similarity=-0.060 Sum_probs=8.9
Q ss_pred HHHHHHHHHHHHHcCCCc
Q 021445 280 LKGALLDTEFAMRDGDDN 297 (312)
Q Consensus 280 ~~~Ai~~~~~al~l~p~~ 297 (312)
|.+|++.|..+++..+.+
T Consensus 41 Y~~Aie~l~~alk~e~~~ 58 (117)
T 2cpt_A 41 YQHAVQYFLHVVKYEAQG 58 (117)
T ss_dssp HHHHHHHHHHHHHTSCCC
T ss_pred HHHHHHHHHHHHHhccCC
Confidence 344455555555555333
No 333
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=29.07 E-value=2.4e+02 Score=24.37 Aligned_cols=67 Identities=12% Similarity=0.025 Sum_probs=31.1
Q ss_pred hhhhHhhhhhHHhhhcHHHHHHHHHHHHH-HhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHH
Q 021445 212 VDSIKVFGNEHYKKQDYKMALRKYRKALR-YLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (312)
Q Consensus 212 ~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~a 290 (312)
+++..++-.....+|+|-||.+.|+-... ++... --..-..++.+=|..+++.+++.-|.+-|.-.
T Consensus 13 ~~r~l~rl~~~I~~G~yYEAhQ~~Rtl~~Ry~~~~-------------~~~eAidlL~~ga~~ll~~~Q~~sa~DLa~ll 79 (312)
T 2wpv_A 13 LAKTLQRFENKIKAGDYYEAHQTLRTIANRYVRSK-------------SYEHAIELISQGALSFLKAKQGGSGTDLIFYL 79 (312)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT-------------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccChHHHHHHHHHHHHHHHHhc-------------CHHHHHHHHHHHHHHHHHCCCcchHHHHHHHH
Confidence 33444444555555666666665543322 21110 01123334555555666666655555544333
Q ss_pred H
Q 021445 291 M 291 (312)
Q Consensus 291 l 291 (312)
+
T Consensus 80 v 80 (312)
T 2wpv_A 80 L 80 (312)
T ss_dssp H
T ss_pred H
Confidence 3
No 334
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=28.30 E-value=3.2e+02 Score=24.43 Aligned_cols=70 Identities=13% Similarity=-0.033 Sum_probs=52.0
Q ss_pred hhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHH-HcCCHHHHHHHHHH
Q 021445 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKL-KLGDLKGALLDTEF 289 (312)
Q Consensus 211 ~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~-kl~~~~~Ai~~~~~ 289 (312)
..+....+...++..+++.+|...|++|....+... ++ ......+..--|..++ ..++|+.|..++-+
T Consensus 138 llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~----~~-------p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~e 206 (394)
T 3txn_A 138 LVEVQLLESKTYHALSNLPKARAALTSARTTANAIY----CP-------PKVQGALDLQSGILHAADERDFKTAFSYFYE 206 (394)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC----CC-------HHHHHHHHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCC----CC-------HHHHHHHHHHhhHHHHHhccCHHHHHHHHHH
Confidence 344455667778889999999999999998654420 11 1234556666788888 89999999999999
Q ss_pred HH
Q 021445 290 AM 291 (312)
Q Consensus 290 al 291 (312)
++
T Consensus 207 af 208 (394)
T 3txn_A 207 AF 208 (394)
T ss_dssp HH
T ss_pred HH
Confidence 87
No 335
>2rkl_A Vacuolar protein sorting-associated protein VTA1; dimerization motif, cytoplasm, endosome, lipid transport, membrane, protein transport; 1.50A {Saccharomyces cerevisiae} PDB: 3mhv_A
Probab=27.46 E-value=91 Score=19.41 Aligned_cols=38 Identities=16% Similarity=0.220 Sum_probs=29.0
Q ss_pred hhhhhhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhh
Q 021445 206 SWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLD 243 (312)
Q Consensus 206 ~~~~~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~ 243 (312)
++.+..|+++-..+.....=.+...|++..++||++|.
T Consensus 14 ~~~i~~AqK~aK~AiSAL~feDv~tA~~~L~~AL~lL~ 51 (53)
T 2rkl_A 14 ASKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLLN 51 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHh
Confidence 34556677777777777788888888888888888653
No 336
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=27.26 E-value=1e+02 Score=20.88 Aligned_cols=24 Identities=4% Similarity=-0.173 Sum_probs=12.5
Q ss_pred hHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 268 TNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 268 ~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
.++|.-.-+.|+|++|+..+..++
T Consensus 17 ~~~Av~~D~~g~y~eAl~~Y~~ai 40 (85)
T 2v6x_A 17 VQKAIDLDTATQYEEAYTAYYNGL 40 (85)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHH
Confidence 344444445566666555555554
No 337
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=26.71 E-value=1.6e+02 Score=20.43 Aligned_cols=63 Identities=11% Similarity=-0.039 Sum_probs=40.2
Q ss_pred HhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHH
Q 021445 216 KVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMR 292 (312)
Q Consensus 216 k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~ 292 (312)
...|-.+|..|+|-+|-+..+..-.-. ..++ -.-..-.+..--|..+++.|+. |...+.+++.
T Consensus 5 ~~~~~~lfn~g~~~eaHEvlE~~W~~~---------~~~~---~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 5 WEEVLGLWRAGRYYEVHEVLEPYWLKA---------TGEE---RRLLQGVILLAAALHQRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC---------CHHH---HHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HHHHHHHHhCCChHHHHHHHHHHHhhC---------CCch---HHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHH
Confidence 357889999999999999888777621 1111 1112222334444555556777 8888888875
No 338
>3jys_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=26.64 E-value=1.2e+02 Score=27.99 Aligned_cols=32 Identities=3% Similarity=0.038 Sum_probs=23.6
Q ss_pred HHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHH
Q 021445 260 RKTKSQIFTNSSACKLKLGDLKGALLDTEFAMR 292 (312)
Q Consensus 260 ~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~ 292 (312)
..+++.+|++. .+|..+++|++|+..|++++.
T Consensus 191 ~allarvyL~~-~~y~~~~~~~~A~~~a~~vi~ 222 (499)
T 3jys_A 191 SALLARMYLNA-EIYTGKARYTECINACNEVIK 222 (499)
T ss_dssp HHHHHHHHHTH-HHHHSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhh-hhccChhHHHHHHHHHHHHHh
Confidence 34555566653 345568899999999999994
No 339
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=26.03 E-value=1e+02 Score=28.37 Aligned_cols=71 Identities=8% Similarity=-0.058 Sum_probs=47.6
Q ss_pred hhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcC-CHHHHHHHHHHHH
Q 021445 213 DSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLG-DLKGALLDTEFAM 291 (312)
Q Consensus 213 ~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~-~~~~Ai~~~~~al 291 (312)
..+..-++-..+.+..+.|...|.+| .. . .. ...+|...|..-.+++ +++.|...++.++
T Consensus 287 ~lw~~y~~~~~r~~~~~~AR~i~~~A-~~-~------~~-----------~~~v~i~~A~lE~~~~~d~~~ar~ife~al 347 (493)
T 2uy1_A 287 LLRINHLNYVLKKRGLELFRKLFIEL-GN-E------GV-----------GPHVFIYCAFIEYYATGSRATPYNIFSSGL 347 (493)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHH-TT-S------CC-----------CHHHHHHHHHHHHHHHCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHh-hC-C------CC-----------ChHHHHHHHHHHHHHCCChHHHHHHHHHHH
Confidence 33555566566677889999999999 41 0 00 1235555666666666 5999999999999
Q ss_pred HcCCCchHHHH
Q 021445 292 RDGDDNVKALF 302 (312)
Q Consensus 292 ~l~p~~~Ka~~ 302 (312)
+.-|+.++-+.
T Consensus 348 ~~~~~~~~~~~ 358 (493)
T 2uy1_A 348 LKHPDSTLLKE 358 (493)
T ss_dssp HHCTTCHHHHH
T ss_pred HHCCCCHHHHH
Confidence 88787765443
No 340
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=25.28 E-value=1.3e+02 Score=22.70 Aligned_cols=48 Identities=13% Similarity=-0.063 Sum_probs=38.1
Q ss_pred HHHHhHHHHHHHHcCC---HHHHHHHHHHHHHcCC-CchHHHHHHHHHhhhh
Q 021445 264 SQIFTNSSACKLKLGD---LKGALLDTEFAMRDGD-DNVKALFRQGQVSIIL 311 (312)
Q Consensus 264 ~~~~~N~a~~~~kl~~---~~~Ai~~~~~al~l~p-~~~Ka~~rrg~a~~~L 311 (312)
...-.|.|-|+.+-.+ ..++|..++..++.+| ..-..+|-.|.++++|
T Consensus 40 ~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~ykl 91 (134)
T 3o48_A 40 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKL 91 (134)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHh
Confidence 3466788888888764 4579999999999888 4578899999999876
No 341
>3l22_A SUSD superfamily protein; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.05A {Bacteroides fragilis}
Probab=25.17 E-value=54 Score=29.88 Aligned_cols=29 Identities=7% Similarity=0.066 Sum_probs=24.8
Q ss_pred HHHHHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 263 KSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 263 ~~~~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..++.=+|.+|+-+++|++|+..|++++
T Consensus 200 k~aA~allarvyL~~~~~~~A~~~a~~vi 228 (441)
T 3l22_A 200 QAAANMLKMRVYMAMNEWDKAITAGELVT 228 (441)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHh
Confidence 44566678889999999999999999997
No 342
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=23.93 E-value=1.7e+02 Score=19.77 Aligned_cols=26 Identities=15% Similarity=0.144 Sum_probs=16.4
Q ss_pred HHhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 266 IFTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 266 ~~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
-+..+|.-.=+.|+|++|+..+..+|
T Consensus 21 ~lv~~Ave~D~~g~y~eAl~lY~~ai 46 (83)
T 2w2u_A 21 KYAINAVKADKEGNAEEAITNYKKAI 46 (83)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 34455555666777777666666665
No 343
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.92 E-value=1e+02 Score=22.57 Aligned_cols=19 Identities=5% Similarity=-0.179 Sum_probs=13.1
Q ss_pred cCCHHHHHHHHHHHHHcCC
Q 021445 277 LGDLKGALLDTEFAMRDGD 295 (312)
Q Consensus 277 l~~~~~Ai~~~~~al~l~p 295 (312)
+.-|.++|....++|.+..
T Consensus 42 l~lYk~GI~eLe~Gl~I~~ 60 (116)
T 2dl1_A 42 KNYYKQGIGHLLRGISISS 60 (116)
T ss_dssp HHHHHHHHHHHHHHHSSCC
T ss_pred HHHHHHHHHHHHHhccccc
Confidence 3456777777788887765
No 344
>1wol_A ST0689, 122AA long conserved hypothetical protein; alpha helix, loop, unknown function; 1.62A {Sulfolobus tokodaii}
Probab=23.58 E-value=94 Score=22.44 Aligned_cols=37 Identities=8% Similarity=0.016 Sum_probs=28.3
Q ss_pred hhhhhhhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHH
Q 021445 205 LSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRY 241 (312)
Q Consensus 205 ~~~~~~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~ 241 (312)
....++.|......+..++..|.|..|...-++|++.
T Consensus 4 ~~~wl~~A~~dL~~A~~~~~~g~y~~a~f~aqQa~Ek 40 (122)
T 1wol_A 4 VEDWIKQAERDLEEARYAKSGGYYELACFLSQQCAEK 40 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 3456778888888888899999998877776666654
No 345
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=23.02 E-value=1.3e+02 Score=20.04 Aligned_cols=30 Identities=13% Similarity=-0.026 Sum_probs=26.1
Q ss_pred HhHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Q 021445 267 FTNSSACKLKLGDLKGALLDTEFAMRDGDD 296 (312)
Q Consensus 267 ~~N~a~~~~kl~~~~~Ai~~~~~al~l~p~ 296 (312)
-..++..++..|++++|+.++-+||..-|+
T Consensus 20 eV~~GE~L~~~g~~~~~~~hf~nAl~Vc~q 49 (73)
T 3ax2_A 20 EIQLGEELLAQGDYEKGVDHLTNAIAVCGQ 49 (73)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 356888899999999999999999998765
No 346
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=22.60 E-value=80 Score=29.41 Aligned_cols=31 Identities=10% Similarity=0.019 Sum_probs=26.1
Q ss_pred HHHHHhHHHHHHHHcCCHHHHHHHHHHHHHc
Q 021445 263 KSQIFTNSSACKLKLGDLKGALLDTEFAMRD 293 (312)
Q Consensus 263 ~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l 293 (312)
+..++.=+|.+|+.+++|++|+..|++++..
T Consensus 181 k~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 181 KGAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4456677888899999999999999999964
No 347
>1ufb_A TT1696 protein; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.90A {Thermus thermophilus} SCOP: a.24.16.3
Probab=22.36 E-value=1e+02 Score=22.33 Aligned_cols=37 Identities=14% Similarity=0.077 Sum_probs=28.2
Q ss_pred hhhhhhhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHH
Q 021445 205 LSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRY 241 (312)
Q Consensus 205 ~~~~~~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~ 241 (312)
....++.|......+..++..|.|..|...-++|++.
T Consensus 4 ~~~w~~~A~~~L~~A~~~~~~g~y~~a~f~a~qa~Ek 40 (127)
T 1ufb_A 4 ARDWLEQARHNLRHAQGSLGLGDYAWACFAAQQAAEA 40 (127)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHH
Confidence 3456778888888888999999998877766666654
No 348
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=22.23 E-value=38 Score=30.56 Aligned_cols=50 Identities=10% Similarity=0.219 Sum_probs=40.1
Q ss_pred CCcceEEeecCCCCCCCceEEEecCCCCCCCCCCceEEEEEe-ChHHHHHHh
Q 021445 101 ERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIK-GMGVVRSIE 151 (312)
Q Consensus 101 ~~~G~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~-G~~vl~~i~ 151 (312)
-++|.|.+.|..-.....+.-|++.+.|. |++.-|+|+|.+ -+.+|+.|.
T Consensus 326 r~rGdItIdN~~ygRY~GElQI~l~dlp~-d~r~NVVG~I~~edl~LLd~I~ 376 (385)
T 1x7f_A 326 QERGQVVIGNNSFGKYKGELQIILKEMPI-DERKNIVGTIAEEELFLLDYVG 376 (385)
T ss_dssp BCTTEEEEECGGGGGGTTCEEEECSCBCC-CTTEEEEEEECGGGGGGGGGCC
T ss_pred ccCCcEEEeCCCccccccEeeEEcccCCC-CCCeeEEEEECHHHHHHHHhcC
Confidence 47899999998655556789999998764 788889999996 577777775
No 349
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=21.69 E-value=1.9e+02 Score=19.45 Aligned_cols=25 Identities=16% Similarity=0.101 Sum_probs=14.4
Q ss_pred HhHHHHHHHHcCCHHHHHHHHHHHH
Q 021445 267 FTNSSACKLKLGDLKGALLDTEFAM 291 (312)
Q Consensus 267 ~~N~a~~~~kl~~~~~Ai~~~~~al 291 (312)
+..+|.-.=+.|+|++|+..+..+|
T Consensus 14 lv~~Ave~D~~g~y~eAl~lY~~ai 38 (83)
T 2v6y_A 14 YAILAVKADKEGKVEDAITYYKKAI 38 (83)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHH
Confidence 3444555556666666666665555
No 350
>3qtm_A Uncharacterized protein C4B3.07; tetratricopeptide repeat, enhancer of translation terminatio translation; HET: CME; 2.15A {Schizosaccharomyces pombe} PDB: 3qtn_B
Probab=21.37 E-value=3.9e+02 Score=22.86 Aligned_cols=93 Identities=11% Similarity=0.174 Sum_probs=59.5
Q ss_pred hhHhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhH----HHHH----HHHcCC------
Q 021445 214 SIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTN----SSAC----KLKLGD------ 279 (312)
Q Consensus 214 ~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N----~a~~----~~kl~~------ 279 (312)
-+.+...++...|+.++.+....-.|.-|+...-..+ .. ..+......+|.. +|.. .++.++
T Consensus 24 gly~msre~le~g~i~~sv~LLNGIIHECDRLLR~~e-~~---~~Lpd~FhAIYAlALl~lSELa~~a~Fk~ede~~V~e 99 (346)
T 3qtm_A 24 GLYEMSREKLENDDIDASVSLVFGTIHEADRILRNTE-DI---STLPKDFHAAYSSALLAVSELFEIAQKRLKETNTEES 99 (346)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCS-CG---GGSCHHHHHHHHHHHHHHHHTHHHHGGGSCTTCCHHH
T ss_pred hHHHHHHHHhhccCchhhhHHHcChHHHHHHHHHccC-CC---CCCCHHHHHHHHHHHHhHHHhhHHhhccCchhhhHHH
Confidence 3567778888899999998888777665554332222 11 1233344433321 1211 233332
Q ss_pred -HHHHHHHHHHHHHcCCCchHHHHHHHHHhhh
Q 021445 280 -LKGALLDTEFAMRDGDDNVKALFRQGQVSII 310 (312)
Q Consensus 280 -~~~Ai~~~~~al~l~p~~~Ka~~rrg~a~~~ 310 (312)
|+.|++-|+--|+..|++.+-.+-++++++.
T Consensus 100 FFDaALERielGLe~~p~s~~L~la~SKILlq 131 (346)
T 3qtm_A 100 YIDAAIERAQLGLDAPGNESRLFLALARAYLE 131 (346)
T ss_dssp HHHHHHHHHHHGGGSSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhhCCCChhHHHHHHHHHHH
Confidence 6889999999999999999988888888753
No 351
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=21.28 E-value=2.7e+02 Score=21.11 Aligned_cols=48 Identities=13% Similarity=-0.031 Sum_probs=38.5
Q ss_pred HHHHhHHHHHHHHcCCH---HHHHHHHHHHHHcCC-CchHHHHHHHHHhhhh
Q 021445 264 SQIFTNSSACKLKLGDL---KGALLDTEFAMRDGD-DNVKALFRQGQVSIIL 311 (312)
Q Consensus 264 ~~~~~N~a~~~~kl~~~---~~Ai~~~~~al~l~p-~~~Ka~~rrg~a~~~L 311 (312)
...-.|.|-|+.+-.+. .++|..++..++.+| ..-..+|-.|.++++|
T Consensus 39 ~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl 90 (144)
T 1y8m_A 39 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKL 90 (144)
T ss_dssp HHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHh
Confidence 34667888888887754 579999999999888 5667999999999876
No 352
>1orj_A Flagellar protein FLIS; flagellin, flagellar export, chaperone, flagellum, four HELI; 2.25A {Aquifex aeolicus} SCOP: a.24.19.1 PDB: 1ory_A
Probab=21.26 E-value=2.6e+02 Score=20.75 Aligned_cols=81 Identities=11% Similarity=0.022 Sum_probs=45.5
Q ss_pred hhhhhhhHhhhhhHHhhhcH-HHH---HHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHH
Q 021445 209 MNAVDSIKVFGNEHYKKQDY-KMA---LRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGAL 284 (312)
Q Consensus 209 ~~~~~~~k~~Gn~~~~~~~y-~~A---~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai 284 (312)
++.+-+...++.....++++ +++ -..-.||+.++......-+. +...++...+..+|.=+...+..+++-.+.+
T Consensus 26 ydgai~~l~~A~~ai~~~d~~~~k~~~~~~i~KA~~Ii~eL~~sLd~--e~GgeiA~nL~~LY~y~~~~LAn~~~d~~~l 103 (130)
T 1orj_A 26 YDKAIECLERAIEIYDQVNELEKRKEFVENIDRVYDIISALKSFLDH--EKGKEIAKNLDTIYTIILNTLVKVDKTKEEL 103 (130)
T ss_dssp HHHHHHHHHHHHHTGGGTTSHHHHHHHHHHHHHHHHHHHHHHHTCCT--TTSHHHHHHHHHHHHHHHHHHHCTTCCHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcCC--ccCcHHHHHHHHHHHHHHHHHhcccCCHHHH
Confidence 35566777888889999999 888 77888888887554332222 2222233333334322222223444334555
Q ss_pred HHHHHHH
Q 021445 285 LDTEFAM 291 (312)
Q Consensus 285 ~~~~~al 291 (312)
+.+...|
T Consensus 104 ~ev~~ll 110 (130)
T 1orj_A 104 QKILEIL 110 (130)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555444
No 353
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=21.09 E-value=2.4e+02 Score=26.00 Aligned_cols=61 Identities=11% Similarity=0.065 Sum_probs=40.9
Q ss_pred HhhhhhHHhhhcHHHHHHHHHHHHHHhhhccccCCCCchhhhHHHHHHHHHHhHHHHHHHHcCCHHHHHHHHHHHHHc
Q 021445 216 KVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRD 293 (312)
Q Consensus 216 k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~~~~N~a~~~~kl~~~~~Ai~~~~~al~l 293 (312)
...-+.+.+.|++++|.+.|.+..+. . +.| ....|..+-.+|.+.|+.++|++.+++..+.
T Consensus 109 n~lI~~~~~~g~~~~A~~l~~~M~~~------g----------~~P-d~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~ 169 (501)
T 4g26_A 109 TNGARLAVAKDDPEMAFDMVKQMKAF------G----------IQP-RLRSYGPALFGFCRKGDADKAYEVDAHMVES 169 (501)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHT------T----------CCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHc------C----------CCC-ccceehHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 34446677899999999988876652 0 001 1335666666777788888888877777643
No 354
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=20.96 E-value=1.6e+02 Score=27.07 Aligned_cols=29 Identities=7% Similarity=-0.051 Sum_probs=24.6
Q ss_pred HHHHhHHHHHHHHcCCHHHHHHHHHHHHH
Q 021445 264 SQIFTNSSACKLKLGDLKGALLDTEFAMR 292 (312)
Q Consensus 264 ~~~~~N~a~~~~kl~~~~~Ai~~~~~al~ 292 (312)
..++.=+|.+|+.+++|++|+..|++++.
T Consensus 180 ~aA~allarvyL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 180 GAAYAALGKIYVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHGGGGS
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 34666688899999999999999999984
No 355
>2a9u_A Ubiquitin carboxyl-terminal hydrolase 8; coil-COIL, protease, SH3-binding, thiol protease, UBL conjugation pathway, structural genomics; 2.10A {Homo sapiens} SCOP: a.118.23.1
Probab=20.74 E-value=1.1e+02 Score=23.31 Aligned_cols=42 Identities=14% Similarity=0.067 Sum_probs=36.1
Q ss_pred CChhhhhhhhhhhHhhhhhHHhhhcHHHHHHHHHHHHHHhhh
Q 021445 203 NELSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDI 244 (312)
Q Consensus 203 ~~~~~~~~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal~~l~~ 244 (312)
-++...+..|..+..+|..+..+|+.+.|--.|.+-+.++..
T Consensus 33 ipl~~y~rsa~~L~r~A~~y~~EGd~E~AYilymRy~~L~~k 74 (144)
T 2a9u_A 33 ISTKSYVHSALKIFKTAEECRLDRDEERAYVLYMKYVTVYNL 74 (144)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 344556888999999999999999999999999999888754
No 356
>2hsb_A Hypothetical UPF0332 protein AF0298; DUF103 family, structural genomics, joint center for structu genomics, JCSG; HET: MSE PG4; 1.95A {Archaeoglobus fulgidus}
Probab=20.42 E-value=1.1e+02 Score=22.10 Aligned_cols=35 Identities=9% Similarity=0.101 Sum_probs=27.0
Q ss_pred hhhhhhhhhhhHhhhhhHHhhhcHHHHHHHHHHHH
Q 021445 205 LSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKAL 239 (312)
Q Consensus 205 ~~~~~~~~~~~k~~Gn~~~~~~~y~~A~~~Y~kal 239 (312)
....++.|....+.+..++..|.|..|+.....|+
T Consensus 5 ~~~~l~~A~~~L~~A~~~~~~g~y~~a~~~ay~a~ 39 (126)
T 2hsb_A 5 LELRIRKAEKLVQDAKKEFEMGLYERCCSTAYYAM 39 (126)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 34567888889999999999999997765544444
No 357
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=20.25 E-value=37 Score=30.45 Aligned_cols=50 Identities=16% Similarity=0.193 Sum_probs=40.5
Q ss_pred CCcceEEeecCCCCCCCceEEEecCCCCCCCCCCceEEEEEe-ChHHHHHHh
Q 021445 101 ERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIK-GMGVVRSIE 151 (312)
Q Consensus 101 ~~~G~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~-G~~vl~~i~ 151 (312)
-++|.|.+.|..-.....+.-|++.+.|. |++.-|+|+|.+ -+.+|+.|.
T Consensus 300 r~rGdItIdN~~ygrY~GElQI~l~dlp~-d~r~NVVG~I~~edl~LLd~I~ 350 (372)
T 2p0o_A 300 RPVGTVTIDNEKYGRYMGEIQVTLVDLPK-DEKVNTITRIIDKDQTILPLIK 350 (372)
T ss_dssp BCTTEEEEECGGGGGGTTCEEEESSCBCC-CTTEEEEEEBCGGGGGGGGGCC
T ss_pred ccCCeEEEeCCCccccccEeeEEcccCCC-CCCeEEEEEECHHHHHHHHhcC
Confidence 47799999998655556789999999874 788889999996 577788775
Done!